CPG32_RS00010	SM00448	cheY-homologous receiver domain
CPG32_RS00010	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS00035	SM00829	Enoylreductase
CPG32_RS00040	SM00116	Domain in cystathionine beta-synthase and other proteins.
CPG32_RS00040	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00100	SM00448	cheY-homologous receiver domain
CPG32_RS00100	SM00850	LytTr DNA-binding domain
CPG32_RS00105	SM00387	Histidine kinase-like ATPases
CPG32_RS00175	SM00871	Bacterial transcription activator, effector binding domain
CPG32_RS00210	SM00855	Phosphoglycerate mutase family
CPG32_RS00225	SM00062	Bacterial periplasmic substrate-binding proteins
CPG32_RS00225	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CPG32_RS00235	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00275	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CPG32_RS00335	SM00387	Histidine kinase-like ATPases
CPG32_RS00340	SM00421	helix_turn_helix, Lux Regulon
CPG32_RS00340	SM00448	cheY-homologous receiver domain
CPG32_RS00350	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS00380	SM00342	helix_turn_helix, arabinose operon control protein
CPG32_RS00410	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS00425	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00430	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00465	SM00988	UreE urease accessory protein, N-terminal domain
CPG32_RS00570	SM00894	Excalibur calcium-binding domain
CPG32_RS00585	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS00595	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS00615	SM00829	Enoylreductase
CPG32_RS00680	SM00850	LytTr DNA-binding domain
CPG32_RS00685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CPG32_RS00685	SM00387	Histidine kinase-like ATPases
CPG32_RS00685	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS00690	SM00448	cheY-homologous receiver domain
CPG32_RS00690	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS00700	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00710	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS00775	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS00890	SM00420	helix_turn_helix, Deoxyribose operon repressor
CPG32_RS00905	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CPG32_RS00905	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CPG32_RS00920	SM00047	Lysozyme subfamily 2
CPG32_RS00965	SM00342	helix_turn_helix, arabinose operon control protein
CPG32_RS00970	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS00985	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS00985	SM01086	C-terminal, D2-small domain, of ClpB protein
CPG32_RS01030	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01040	SM00852	Probable molybdopterin binding domain
CPG32_RS01050	SM00852	Probable molybdopterin binding domain
CPG32_RS01075	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS01090	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS01130	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CPG32_RS01130	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CPG32_RS01130	SM00493	CPG32_RS01130
CPG32_RS01145	SM01403	CPG32_RS01145
CPG32_RS01165	SM01382	CPG32_RS01165
CPG32_RS01165	SM01383	CPG32_RS01165
CPG32_RS01180	SM00322	K homology RNA-binding domain
CPG32_RS01200	SM01374	CPG32_RS01200
CPG32_RS01205	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CPG32_RS01260	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS01280	SM00662	RNA polymerases D
CPG32_RS01290	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01295	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01330	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01340	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01395	SM00420	helix_turn_helix, Deoxyribose operon repressor
CPG32_RS01395	SM01134	CPG32_RS01395
CPG32_RS01415	SM01133	CPG32_RS01415
CPG32_RS01440	SM00829	Enoylreductase
CPG32_RS01445	SM00829	Enoylreductase
CPG32_RS01620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CPG32_RS01660	SM01133	CPG32_RS01660
CPG32_RS01665	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CPG32_RS01685	SM00899	CPG32_RS01685
CPG32_RS01765	SM00357	Cold shock protein domain
CPG32_RS01765	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01765	SM00959	Rho termination factor, N-terminal domain
CPG32_RS01780	SM00937	CPG32_RS01780
CPG32_RS01795	SM00226	Low molecular weight phosphatase family
CPG32_RS01850	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01880	SM00342	helix_turn_helix, arabinose operon control protein
CPG32_RS01885	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS01935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPG32_RS01940	SM00155	Phospholipase D. Active site motifs.
CPG32_RS01975	SM00487	DEAD-like helicases superfamily
CPG32_RS01975	SM00490	helicase superfamily c-terminal domain
CPG32_RS02000	SM01005	Alanine racemase, C-terminal domain
CPG32_RS02015	SM00331	Sigma factor PP2C-like phosphatases
CPG32_RS02015	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CPG32_RS02035	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS02035	SM00732	Likely ribonuclease with RNase H fold.
CPG32_RS02040	SM00731	SprT homologues.
CPG32_RS02090	SM01329	CPG32_RS02090
CPG32_RS02095	SM00917	LeuA allosteric (dimerisation) domain
CPG32_RS02140	SM00534	ATPase domain of DNA mismatch repair MUTS family
CPG32_RS02145	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS02150	SM00881	CoA binding domain
CPG32_RS02175	SM00354	helix_turn _helix lactose operon repressor
CPG32_RS02180	SM00640	Glycosyl hydrolases family 32
CPG32_RS02190	SM00448	cheY-homologous receiver domain
CPG32_RS02190	SM00850	LytTr DNA-binding domain
CPG32_RS02200	SM00794	Staphylococcal AgrD protein
CPG32_RS02205	SM00793	Accessory gene regulator B
CPG32_RS02230	SM00883	Chaperonin 10 Kd subunit
CPG32_RS02245	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS02250	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS02275	SM00942	Primase C terminal 1 (PriCT-1)
CPG32_RS02355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CPG32_RS02360	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS02370	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS02420	SM01131	CPG32_RS02420
CPG32_RS02430	SM00710	Parallel beta-helix repeats
CPG32_RS02470	SM00998	Adenylosuccinate lyase C-terminus
CPG32_RS02490	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CPG32_RS02490	SM00292	breast cancer carboxy-terminal domain
CPG32_RS02490	SM00532	Ligase N family
CPG32_RS02520	SM00845	GatB domain
CPG32_RS02525	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CPG32_RS02550	SM00479	CPG32_RS02550
CPG32_RS02600	SM00387	Histidine kinase-like ATPases
CPG32_RS02605	SM00421	helix_turn_helix, Lux Regulon
CPG32_RS02605	SM00448	cheY-homologous receiver domain
CPG32_RS02620	SM00226	Low molecular weight phosphatase family
CPG32_RS02685	SM00478	endonuclease III
CPG32_RS02685	SM00525	CPG32_RS02685
CPG32_RS02695	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS02885	SM00062	Bacterial periplasmic substrate-binding proteins
CPG32_RS02885	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CPG32_RS02890	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS02930	SM00387	Histidine kinase-like ATPases
CPG32_RS02935	SM00421	helix_turn_helix, Lux Regulon
CPG32_RS02935	SM00448	cheY-homologous receiver domain
CPG32_RS02940	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS02965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPG32_RS03000	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS03090	SM01234	CPG32_RS03090
CPG32_RS03165	SM00047	Lysozyme subfamily 2
CPG32_RS03215	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS03230	SM00450	Rhodanese Homology Domain
CPG32_RS03245	SM00363	S4 RNA-binding domain
CPG32_RS03275	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS03305	SM00843	CPG32_RS03305
CPG32_RS03325	SM00830	Chorismate mutase type II
CPG32_RS03330	SM00354	helix_turn _helix lactose operon repressor
CPG32_RS03345	SM00822	CPG32_RS03345
CPG32_RS03375	SM00363	S4 RNA-binding domain
CPG32_RS03380	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CPG32_RS03385	SM00563	Phosphate acyltransferases
CPG32_RS03420	SM00363	S4 RNA-binding domain
CPG32_RS03420	SM01390	CPG32_RS03420
CPG32_RS03430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CPG32_RS03445	SM00981	CPG32_RS03445
CPG32_RS03475	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CPG32_RS03475	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CPG32_RS03485	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS03495	SM00116	Domain in cystathionine beta-synthase and other proteins.
CPG32_RS03505	SM00481	DNA polymerase alpha chain like domain
CPG32_RS03510	SM00919	Malic enzyme, NAD binding domain
CPG32_RS03510	SM01274	CPG32_RS03510
CPG32_RS03535	SM01321	CPG32_RS03535
CPG32_RS03550	SM01329	CPG32_RS03550
CPG32_RS03555	SM00448	cheY-homologous receiver domain
CPG32_RS03555	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS03560	SM00387	Histidine kinase-like ATPases
CPG32_RS03560	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS03565	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CPG32_RS03565	SM00475	5'-3' exonuclease
CPG32_RS03565	SM00482	DNA polymerase A domain
CPG32_RS03570	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CPG32_RS03570	SM01232	CPG32_RS03570
CPG32_RS03580	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CPG32_RS03585	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS03585	SM00876	Biotin and Thiamin Synthesis associated domain
CPG32_RS03600	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS03605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CPG32_RS03645	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS03645	SM00994	ClpX C4-type zinc finger
CPG32_RS03645	SM01086	C-terminal, D2-small domain, of ClpB protein
CPG32_RS03675	SM01004	Delta-aminolevulinic acid dehydratase
CPG32_RS03765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CPG32_RS03770	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS03785	SM01323	CPG32_RS03785
CPG32_RS03805	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPG32_RS03805	SM00954	Region found in RelA / SpoT proteins
CPG32_RS03815	SM00287	Bacterial SH3 domain homologues
CPG32_RS03815	SM00646	CPG32_RS03815
CPG32_RS03840	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS03870	SM00028	Tetratricopeptide repeats
CPG32_RS03875	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS03880	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CPG32_RS03890	SM00732	Likely ribonuclease with RNase H fold.
CPG32_RS03925	SM00796	Allophanate hydrolase subunit 1
CPG32_RS03930	SM00797	Allophanate hydrolase subunit 2
CPG32_RS03940	SM00878	Biotin carboxylase C-terminal domain
CPG32_RS03975	SM01103	CPG32_RS03975
CPG32_RS03985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPG32_RS04000	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CPG32_RS04010	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS04025	SM00838	Elongation factor G C-terminus
CPG32_RS04030	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS04050	SM00271	DnaJ molecular chaperone homology domain
CPG32_RS04065	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS04125	SM00116	Domain in cystathionine beta-synthase and other proteins.
CPG32_RS04135	SM00400	zinc finger
CPG32_RS04135	SM00493	CPG32_RS04135
CPG32_RS04155	SM00487	DEAD-like helicases superfamily
CPG32_RS04155	SM00490	helicase superfamily c-terminal domain
CPG32_RS04160	SM00518	AP endonuclease family 2
CPG32_RS04165	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS04200	SM00028	Tetratricopeptide repeats
CPG32_RS04220	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS04280	SM00450	Rhodanese Homology Domain
CPG32_RS04310	SM00841	Elongation factor P, C-terminal
CPG32_RS04310	SM01185	CPG32_RS04310
CPG32_RS04320	SM00878	Biotin carboxylase C-terminal domain
CPG32_RS04375	SM00861	Transketolase, pyrimidine binding domain
CPG32_RS04395	SM01321	CPG32_RS04395
CPG32_RS04405	SM01350	CPG32_RS04405
CPG32_RS04410	SM00354	helix_turn _helix lactose operon repressor
CPG32_RS04415	SM00642	Alpha-amylase domain
CPG32_RS04420	SM00342	helix_turn_helix, arabinose operon control protein
CPG32_RS04420	SM00871	Bacterial transcription activator, effector binding domain
CPG32_RS04480	SM00363	S4 RNA-binding domain
CPG32_RS04485	SM00448	cheY-homologous receiver domain
CPG32_RS04485	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS04490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CPG32_RS04490	SM00387	Histidine kinase-like ATPases
CPG32_RS04490	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS04510	SM00487	DEAD-like helicases superfamily
CPG32_RS04510	SM00490	helicase superfamily c-terminal domain
CPG32_RS04515	SM00257	Lysin motif
CPG32_RS04530	SM00870	CPG32_RS04530
CPG32_RS04540	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS04555	SM00411	bacterial (prokaryotic) histone like domain
CPG32_RS04575	SM00562	CPG32_RS04575
CPG32_RS04635	SM00479	CPG32_RS04635
CPG32_RS04635	SM00491	CPG32_RS04635
CPG32_RS04650	SM00478	endonuclease III
CPG32_RS04650	SM00525	CPG32_RS04650
CPG32_RS04690	SM00981	CPG32_RS04690
CPG32_RS04705	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CPG32_RS04705	SM00475	5'-3' exonuclease
CPG32_RS04780	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS04805	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS04815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CPG32_RS04820	SM01130	CPG32_RS04820
CPG32_RS04840	SM01005	Alanine racemase, C-terminal domain
CPG32_RS04855	SM00357	Cold shock protein domain
CPG32_RS04885	SM00327	von Willebrand factor (vWF) type A domain
CPG32_RS04910	SM00861	Transketolase, pyrimidine binding domain
CPG32_RS04915	SM00387	Histidine kinase-like ATPases
CPG32_RS04915	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS04920	SM00448	cheY-homologous receiver domain
CPG32_RS04920	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS04925	SM00014	Acid phosphatase homologues
CPG32_RS04940	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CPG32_RS04940	SM00245	tail specific protease
CPG32_RS04985	SM00932	Scaffold protein Nfu/NifU N terminal
CPG32_RS05025	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CPG32_RS05035	SM01007	Class II Aldolase and Adducin N-terminal domain
CPG32_RS05105	SM00434	DNA Topoisomerase IV
CPG32_RS05110	SM00387	Histidine kinase-like ATPases
CPG32_RS05110	SM00433	TopoisomeraseII
CPG32_RS05115	SM01207	CPG32_RS05115
CPG32_RS05165	SM00861	Transketolase, pyrimidine binding domain
CPG32_RS05190	SM01240	CPG32_RS05190
CPG32_RS05205	SM01060	CPG32_RS05205
CPG32_RS05255	SM00318	Staphylococcal nuclease homologues
CPG32_RS05270	SM00421	helix_turn_helix, Lux Regulon
CPG32_RS05270	SM00448	cheY-homologous receiver domain
CPG32_RS05285	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS05290	SM00155	Phospholipase D. Active site motifs.
CPG32_RS05300	SM01230	CPG32_RS05300
CPG32_RS05305	SM00422	helix_turn_helix, mercury resistance
CPG32_RS05360	SM00853	MutL C terminal dimerisation domain
CPG32_RS05360	SM01340	CPG32_RS05360
CPG32_RS05365	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CPG32_RS05365	SM00534	ATPase domain of DNA mismatch repair MUTS family
CPG32_RS05380	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS05420	SM00322	K homology RNA-binding domain
CPG32_RS05420	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPG32_RS05425	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS05430	SM00852	Probable molybdopterin binding domain
CPG32_RS05440	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS05465	SM00866	CPG32_RS05465
CPG32_RS05470	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS05470	SM00843	CPG32_RS05470
CPG32_RS05475	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS05480	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS05480	SM00322	K homology RNA-binding domain
CPG32_RS05485	SM01387	CPG32_RS05485
CPG32_RS05490	SM00904	Riboflavin kinase
CPG32_RS05520	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS05520	SM00322	K homology RNA-binding domain
CPG32_RS05530	SM00479	CPG32_RS05530
CPG32_RS05530	SM00481	DNA polymerase alpha chain like domain
CPG32_RS05585	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS05585	SM01086	C-terminal, D2-small domain, of ClpB protein
CPG32_RS05605	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CPG32_RS05605	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CPG32_RS05605	SM00493	CPG32_RS05605
CPG32_RS05625	SM00881	CoA binding domain
CPG32_RS05700	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS05700	SM00962	SRP54-type protein, GTPase domain
CPG32_RS05700	SM00963	SRP54-type protein, helical bundle domain
CPG32_RS05710	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS05710	SM00962	SRP54-type protein, GTPase domain
CPG32_RS05710	SM00963	SRP54-type protein, helical bundle domain
CPG32_RS05715	SM00968	SMC proteins Flexible Hinge Domain
CPG32_RS05720	SM00358	Double-stranded RNA binding motif
CPG32_RS05720	SM00535	Ribonuclease III family
CPG32_RS05730	SM00822	CPG32_RS05730
CPG32_RS05735	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CPG32_RS05750	SM00487	DEAD-like helicases superfamily
CPG32_RS05750	SM00490	helicase superfamily c-terminal domain
CPG32_RS05755	SM01120	CPG32_RS05755
CPG32_RS05755	SM01121	CPG32_RS05755
CPG32_RS05770	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CPG32_RS05785	SM00220	Serine/Threonine protein kinases, catalytic domain
CPG32_RS05785	SM00740	CPG32_RS05785
CPG32_RS05790	SM00331	Sigma factor PP2C-like phosphatases
CPG32_RS05790	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CPG32_RS05815	SM00487	DEAD-like helicases superfamily
CPG32_RS05815	SM00490	helicase superfamily c-terminal domain
CPG32_RS05825	SM01409	CPG32_RS05825
CPG32_RS05830	SM00072	Guanylate kinase homologues.
CPG32_RS05855	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CPG32_RS05860	SM00851	MGS-like domain
CPG32_RS05860	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CPG32_RS05860	SM01209	CPG32_RS05860
CPG32_RS05865	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CPG32_RS05890	SM00363	S4 RNA-binding domain
CPG32_RS05915	SM00363	S4 RNA-binding domain
CPG32_RS05940	SM00864	Tubulin/FtsZ family, GTPase domain
CPG32_RS05940	SM00865	Tubulin/FtsZ family, C-terminal domain
CPG32_RS05945	SM00842	Cell division protein FtsA
CPG32_RS05965	SM00740	CPG32_RS05965
CPG32_RS06035	SM00465	GIY-YIG type nucleases (URI domain)
CPG32_RS06045	SM00463	Small MutS-related domain
CPG32_RS06045	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CPG32_RS06045	SM00534	ATPase domain of DNA mismatch repair MUTS family
CPG32_RS06050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CPG32_RS06050	SM00481	DNA polymerase alpha chain like domain
CPG32_RS06050	SM00483	DNA polymerase X family
CPG32_RS06075	SM00873	B3/4 domain
CPG32_RS06075	SM00874	tRNA synthetase B5 domain
CPG32_RS06075	SM00896	Ferredoxin-fold anticodon binding domain
CPG32_RS06085	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CPG32_RS06160	SM00878	Biotin carboxylase C-terminal domain
CPG32_RS06190	SM00838	Elongation factor G C-terminus
CPG32_RS06240	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06245	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS06265	SM00861	Transketolase, pyrimidine binding domain
CPG32_RS06290	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS06345	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06355	SM01209	CPG32_RS06355
CPG32_RS06355	SM01210	CPG32_RS06355
CPG32_RS06360	SM00798	AICARFT/IMPCHase bienzyme
CPG32_RS06360	SM00851	MGS-like domain
CPG32_RS06385	SM01211	CPG32_RS06385
CPG32_RS06405	SM01001	AIR carboxylase
CPG32_RS06470	SM00047	Lysozyme subfamily 2
CPG32_RS06470	SM00644	CPG32_RS06470
CPG32_RS06475	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS06575	SM00914	CPG32_RS06575
CPG32_RS06605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CPG32_RS06645	SM00422	helix_turn_helix, mercury resistance
CPG32_RS06675	SM00116	Domain in cystathionine beta-synthase and other proteins.
CPG32_RS06675	SM00924	MgtE intracellular N domain
CPG32_RS06690	SM00954	Region found in RelA / SpoT proteins
CPG32_RS06700	SM01118	CPG32_RS06700
CPG32_RS06750	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06755	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06775	SM00825	Beta-ketoacyl synthase
CPG32_RS06790	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06790	SM01086	C-terminal, D2-small domain, of ClpB protein
CPG32_RS06875	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CPG32_RS06885	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS06895	SM01298	CPG32_RS06895
CPG32_RS06965	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06970	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS06975	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07005	SM00823	Phosphopantetheine attachment site
CPG32_RS07100	SM00729	Elongator protein 3, MiaB family, Radical SAM
CPG32_RS07325	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07355	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07355	SM00930	CPG32_RS07355
CPG32_RS07365	SM00493	CPG32_RS07365
CPG32_RS07405	SM00855	Phosphoglycerate mutase family
CPG32_RS07530	SM00450	Rhodanese Homology Domain
CPG32_RS07535	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS07565	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS07565	SM00357	Cold shock protein domain
CPG32_RS07565	SM00955	CPG32_RS07565
CPG32_RS07585	SM01192	CPG32_RS07585
CPG32_RS07585	SM01193	CPG32_RS07585
CPG32_RS07605	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CPG32_RS07680	SM00487	DEAD-like helicases superfamily
CPG32_RS07680	SM00490	helicase superfamily c-terminal domain
CPG32_RS07695	SM00257	Lysin motif
CPG32_RS07705	SM00957	SecA DEAD-like domain
CPG32_RS07705	SM00958	SecA preprotein cross-linking domain
CPG32_RS07710	SM00644	CPG32_RS07710
CPG32_RS07725	SM00487	DEAD-like helicases superfamily
CPG32_RS07725	SM00490	helicase superfamily c-terminal domain
CPG32_RS07745	SM00267	diguanylate cyclase
CPG32_RS07800	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07820	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07865	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CPG32_RS07890	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07895	SM00341	Helicase and RNase D C-terminal
CPG32_RS07895	SM00487	DEAD-like helicases superfamily
CPG32_RS07895	SM00490	helicase superfamily c-terminal domain
CPG32_RS07895	SM00956	CPG32_RS07895
CPG32_RS07900	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS07920	SM00797	Allophanate hydrolase subunit 2
CPG32_RS07925	SM00796	Allophanate hydrolase subunit 1
CPG32_RS07975	SM01091	Transporter associated domain
CPG32_RS07990	SM00420	helix_turn_helix, Deoxyribose operon repressor
CPG32_RS07990	SM01134	CPG32_RS07990
CPG32_RS08040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CPG32_RS08045	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS08125	SM00342	helix_turn_helix, arabinose operon control protein
CPG32_RS08135	SM00257	Lysin motif
CPG32_RS08155	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08160	SM00387	Histidine kinase-like ATPases
CPG32_RS08165	SM00448	cheY-homologous receiver domain
CPG32_RS08165	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS08210	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08245	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08280	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08305	SM00529	Helix-turn-helix diphteria tox regulatory element
CPG32_RS08305	SM00899	CPG32_RS08305
CPG32_RS08310	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08435	SM00422	helix_turn_helix, mercury resistance
CPG32_RS08440	SM00478	endonuclease III
CPG32_RS08445	SM00836	DALR anticodon binding domain
CPG32_RS08445	SM01016	Arginyl tRNA synthetase N terminal dom
CPG32_RS08465	SM00829	Enoylreductase
CPG32_RS08475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CPG32_RS08580	SM00986	Uracil DNA glycosylase superfamily
CPG32_RS08580	SM00987	UreE urease accessory protein, C-terminal domain 
CPG32_RS08620	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CPG32_RS08690	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CPG32_RS08690	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CPG32_RS08750	SM00838	Elongation factor G C-terminus
CPG32_RS08750	SM00889	Elongation factor G, domain IV
CPG32_RS08770	SM00663	RNA polymerase I subunit A N-terminus
CPG32_RS08805	SM00649	Ribosomal protein L11/L12
CPG32_RS08810	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CPG32_RS08810	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CPG32_RS08835	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CPG32_RS08840	SM00535	Ribonuclease III family
CPG32_RS08845	SM00840	CPG32_RS08845
CPG32_RS08860	SM00670	Large family of predicted nucleotide-binding domains
CPG32_RS08865	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08870	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS08870	SM01086	C-terminal, D2-small domain, of ClpB protein
CPG32_RS08905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CPG32_RS09005	SM00905	Dihydroneopterin aldolase
CPG32_RS09025	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09035	SM00977	TilS substrate C-terminal domain
CPG32_RS09040	SM00316	Ribosomal protein S1-like RNA-binding domain
CPG32_RS09050	SM00363	S4 RNA-binding domain
CPG32_RS09065	SM00487	DEAD-like helicases superfamily
CPG32_RS09065	SM00490	helicase superfamily c-terminal domain
CPG32_RS09065	SM00982	CPG32_RS09065
CPG32_RS09065	SM01058	CarD-like/TRCF domain
CPG32_RS09080	SM01400	CPG32_RS09080
CPG32_RS09115	SM00650	Ribosomal RNA adenine dimethylases
CPG32_RS09120	SM00493	CPG32_RS09120
CPG32_RS09140	SM00465	GIY-YIG type nucleases (URI domain)
CPG32_RS09210	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CPG32_RS09210	SM00493	CPG32_RS09210
CPG32_RS09220	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CPG32_RS09235	SM00866	CPG32_RS09235
CPG32_RS09240	SM00642	Alpha-amylase domain
CPG32_RS09290	SM00257	Lysin motif
CPG32_RS09305	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09305	SM00930	CPG32_RS09305
CPG32_RS09310	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09315	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09350	SM00014	Acid phosphatase homologues
CPG32_RS09375	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CPG32_RS09380	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS09385	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS09400	SM00116	Domain in cystathionine beta-synthase and other proteins.
CPG32_RS09400	SM01240	CPG32_RS09400
CPG32_RS09470	SM00855	Phosphoglycerate mutase family
CPG32_RS09500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CPG32_RS09550	SM00942	Primase C terminal 1 (PriCT-1)
CPG32_RS09570	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS09575	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS09630	SM00470	ParB-like nuclease domain
CPG32_RS09680	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09700	SM00387	Histidine kinase-like ATPases
CPG32_RS09700	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS09710	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09715	SM00448	cheY-homologous receiver domain
CPG32_RS09715	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS09725	SM00640	Glycosyl hydrolases family 32
CPG32_RS09730	SM00354	helix_turn _helix lactose operon repressor
CPG32_RS09765	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09780	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS09785	SM00062	Bacterial periplasmic substrate-binding proteins
CPG32_RS09805	SM00829	Enoylreductase
CPG32_RS09825	SM00470	ParB-like nuclease domain
CPG32_RS09835	SM01228	CPG32_RS09835
CPG32_RS09855	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS09855	SM00760	Bacterial dnaA protein helix-turn-helix domain
CPG32_RS09860	SM00480	DNA polymerase III beta subunit
CPG32_RS09875	SM00387	Histidine kinase-like ATPases
CPG32_RS09875	SM00433	TopoisomeraseII
CPG32_RS09880	SM00434	DNA Topoisomerase IV
CPG32_RS09915	SM00267	diguanylate cyclase
CPG32_RS09930	SM00788	Adenylosuccinate synthetase
CPG32_RS09945	SM00448	cheY-homologous receiver domain
CPG32_RS09945	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS09950	SM00091	PAS domain
CPG32_RS09950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CPG32_RS09950	SM00387	Histidine kinase-like ATPases
CPG32_RS09950	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS09990	SM00849	Metallo-beta-lactamase superfamily
CPG32_RS10005	SM00344	helix_turn_helix ASNC type
CPG32_RS10060	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10095	SM00387	Histidine kinase-like ATPases
CPG32_RS10100	SM00448	cheY-homologous receiver domain
CPG32_RS10100	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS10115	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10130	SM00823	Phosphopantetheine attachment site
CPG32_RS10175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CPG32_RS10175	SM00866	CPG32_RS10175
CPG32_RS10185	SM01133	CPG32_RS10185
CPG32_RS10215	SM00448	cheY-homologous receiver domain
CPG32_RS10215	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS10220	SM00387	Histidine kinase-like ATPases
CPG32_RS10220	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS10245	SM00725	NEAr Transporter domain
CPG32_RS10260	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10265	SM00725	NEAr Transporter domain
CPG32_RS10270	SM00725	NEAr Transporter domain
CPG32_RS10275	SM00725	NEAr Transporter domain
CPG32_RS10290	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10305	SM00047	Lysozyme subfamily 2
CPG32_RS10335	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS10350	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10380	SM00420	helix_turn_helix, Deoxyribose operon repressor
CPG32_RS10380	SM01134	CPG32_RS10380
CPG32_RS10385	SM00855	Phosphoglycerate mutase family
CPG32_RS10390	SM00387	Histidine kinase-like ATPases
CPG32_RS10390	SM00388	His Kinase A (phosphoacceptor) domain
CPG32_RS10395	SM00448	cheY-homologous receiver domain
CPG32_RS10395	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS10430	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10450	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CPG32_RS10470	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10505	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10510	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10610	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CPG32_RS10620	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10640	SM00357	Cold shock protein domain
CPG32_RS10650	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CPG32_RS10705	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10750	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10755	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS10775	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS10785	SM00867	YceI-like domain 
CPG32_RS10865	SM00900	CPG32_RS10865
CPG32_RS10900	SM00861	Transketolase, pyrimidine binding domain
CPG32_RS10960	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS10985	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS11025	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS11045	SM00506	Appr-1"-p processing enzyme
CPG32_RS11105	SM01130	CPG32_RS11105
CPG32_RS11195	SM00450	Rhodanese Homology Domain
CPG32_RS11225	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS11235	SM00530	Helix-turn-helix XRE-family like proteins 
CPG32_RS11270	SM00047	Lysozyme subfamily 2
CPG32_RS11345	SM00854	Bacterial capsule synthesis protein PGA_cap
CPG32_RS11435	SM00984	UDP binding domain
CPG32_RS11445	SM00098	Alkaline phosphatase homologues
CPG32_RS11455	SM00448	cheY-homologous receiver domain
CPG32_RS11455	SM00862	Transcriptional regulatory protein, C terminal
CPG32_RS11460	SM00387	Histidine kinase-like ATPases
CPG32_RS11465	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS11630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CPG32_RS11630	SM00866	CPG32_RS11630
CPG32_RS11885	SM01266	CPG32_RS11885
CPG32_RS11950	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS12005	SM00829	Enoylreductase
CPG32_RS12045	SM00854	Bacterial capsule synthesis protein PGA_cap
CPG32_RS12095	SM01208	CPG32_RS12095
CPG32_RS12150	SM00347	helix_turn_helix multiple antibiotic resistance protein
CPG32_RS12235	SM00954	Region found in RelA / SpoT proteins
CPG32_RS12250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CPG32_RS12250	SM00895	CPG32_RS12250
CPG32_RS12355	SM00382	ATPases associated with a variety of cellular activities
CPG32_RS12360	SM00062	Bacterial periplasmic substrate-binding proteins
CPG32_RS12390	SM00382	ATPases associated with a variety of cellular activities
