BJD96_RS00010 SM00480 DNA polymerase III beta subunit BJD96_RS00025 SM00387 Histidine kinase-like ATPases BJD96_RS00025 SM00433 TopoisomeraseII BJD96_RS00030 SM00434 DNA Topoisomerase IV BJD96_RS00070 SM00267 diguanylate cyclase BJD96_RS00085 SM00788 Adenylosuccinate synthetase BJD96_RS00105 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS00115 SM00448 cheY-homologous receiver domain BJD96_RS00115 SM00862 Transcriptional regulatory protein, C terminal BJD96_RS00120 SM00091 PAS domain BJD96_RS00120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD96_RS00120 SM00387 Histidine kinase-like ATPases BJD96_RS00120 SM00388 His Kinase A (phosphoacceptor) domain BJD96_RS00135 SM00849 Metallo-beta-lactamase superfamily BJD96_RS00150 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD96_RS00155 SM00226 Low molecular weight phosphatase family BJD96_RS00165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD96_RS00220 SM00857 Resolvase, N terminal domain BJD96_RS00225 SM00857 Resolvase, N terminal domain BJD96_RS00265 SM00422 helix_turn_helix, mercury resistance BJD96_RS00280 SM00829 Enoylreductase BJD96_RS00325 SM00382 ATPases associated with a variety of cellular activities BJD96_RS00340 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS00350 SM00829 Enoylreductase BJD96_RS00395 SM00420 helix_turn_helix, Deoxyribose operon repressor BJD96_RS00395 SM01134 BJD96_RS00395 BJD96_RS00410 SM01007 Class II Aldolase and Adducin N-terminal domain BJD96_RS00455 SM01321 BJD96_RS00455 BJD96_RS00465 SM00448 cheY-homologous receiver domain BJD96_RS00475 SM00919 Malic enzyme, NAD binding domain BJD96_RS00475 SM01274 BJD96_RS00475 BJD96_RS00480 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS00540 SM00047 Lysozyme subfamily 2 BJD96_RS00550 SM00849 Metallo-beta-lactamase superfamily BJD96_RS00635 SM00344 helix_turn_helix ASNC type BJD96_RS00790 SM01061 CAT RNA binding domain BJD96_RS00840 SM01061 CAT RNA binding domain BJD96_RS00865 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS00875 SM01038 Beta galactosidase small chain BJD96_RS00895 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS00955 SM00829 Enoylreductase BJD96_RS00965 SM00829 Enoylreductase BJD96_RS01030 SM00450 Rhodanese Homology Domain BJD96_RS01045 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS01055 SM01007 Class II Aldolase and Adducin N-terminal domain BJD96_RS01085 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS01095 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS01140 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01240 SM00710 Parallel beta-helix repeats BJD96_RS01285 SM00506 Appr-1"-p processing enzyme BJD96_RS01320 SM01001 AIR carboxylase BJD96_RS01370 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS01375 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS01385 SM00155 Phospholipase D. Active site motifs. BJD96_RS01390 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS01460 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01480 SM00854 Bacterial capsule synthesis protein PGA_cap BJD96_RS01510 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01520 SM00420 helix_turn_helix, Deoxyribose operon repressor BJD96_RS01520 SM01134 BJD96_RS01520 BJD96_RS01525 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01555 SM00859 Semialdehyde dehydrogenase, NAD binding domain BJD96_RS01585 SM00346 helix_turn_helix isocitrate lyase regulation BJD96_RS01745 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01790 SM00988 UreE urease accessory protein, N-terminal domain BJD96_RS01830 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01835 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01845 SM00382 ATPases associated with a variety of cellular activities BJD96_RS01850 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS01915 SM00478 endonuclease III BJD96_RS01965 SM00382 ATPases associated with a variety of cellular activities BJD96_RS02000 SM01266 BJD96_RS02000 BJD96_RS02040 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS02180 SM00854 Bacterial capsule synthesis protein PGA_cap BJD96_RS02215 SM00382 ATPases associated with a variety of cellular activities BJD96_RS02220 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS02225 SM00354 helix_turn _helix lactose operon repressor BJD96_RS02240 SM00829 Enoylreductase BJD96_RS02280 SM01130 BJD96_RS02280 BJD96_RS02300 SM01321 BJD96_RS02300 BJD96_RS02310 SM00382 ATPases associated with a variety of cellular activities BJD96_RS02315 SM00382 ATPases associated with a variety of cellular activities BJD96_RS02335 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS02410 SM00954 Region found in RelA / SpoT proteins BJD96_RS02415 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS02415 SM00895 BJD96_RS02415 BJD96_RS02600 SM00382 ATPases associated with a variety of cellular activities BJD96_RS02650 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD96_RS02650 SM00382 ATPases associated with a variety of cellular activities BJD96_RS02725 SM00871 Bacterial transcription activator, effector binding domain BJD96_RS02750 SM00855 Phosphoglycerate mutase family BJD96_RS02765 SM01022 BJD96_RS02765 BJD96_RS02785 SM00867 YceI-like domain BJD96_RS02855 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BJD96_RS02880 SM00387 Histidine kinase-like ATPases BJD96_RS02885 SM00421 helix_turn_helix, Lux Regulon BJD96_RS02885 SM00448 cheY-homologous receiver domain BJD96_RS02905 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS02935 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS02940 SM00644 BJD96_RS02940 BJD96_RS02975 SM00420 helix_turn_helix, Deoxyribose operon repressor BJD96_RS02975 SM01134 BJD96_RS02975 BJD96_RS02990 SM01120 BJD96_RS02990 BJD96_RS03030 SM00829 Enoylreductase BJD96_RS03065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD96_RS03065 SM00387 Histidine kinase-like ATPases BJD96_RS03065 SM00388 His Kinase A (phosphoacceptor) domain BJD96_RS03070 SM00448 cheY-homologous receiver domain BJD96_RS03070 SM00862 Transcriptional regulatory protein, C terminal BJD96_RS03080 SM00382 ATPases associated with a variety of cellular activities BJD96_RS03090 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS03195 SM00382 ATPases associated with a variety of cellular activities BJD96_RS03265 SM00903 Flavin reductase like domain BJD96_RS03330 SM00098 Alkaline phosphatase homologues BJD96_RS03365 SM00420 helix_turn_helix, Deoxyribose operon repressor BJD96_RS03380 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BJD96_RS03380 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BJD96_RS03395 SM00047 Lysozyme subfamily 2 BJD96_RS03480 SM00062 Bacterial periplasmic substrate-binding proteins BJD96_RS03485 SM00382 ATPases associated with a variety of cellular activities BJD96_RS03515 SM00354 helix_turn _helix lactose operon repressor BJD96_RS03545 SM00382 ATPases associated with a variety of cellular activities BJD96_RS03560 SM00852 Probable molybdopterin binding domain BJD96_RS03570 SM00852 Probable molybdopterin binding domain BJD96_RS03595 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD96_RS03610 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS03670 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BJD96_RS03670 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BJD96_RS03670 SM00493 BJD96_RS03670 BJD96_RS03685 SM01403 BJD96_RS03685 BJD96_RS03705 SM01382 BJD96_RS03705 BJD96_RS03705 SM01383 BJD96_RS03705 BJD96_RS03720 SM00322 K homology RNA-binding domain BJD96_RS03740 SM01374 BJD96_RS03740 BJD96_RS03745 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BJD96_RS03800 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS03820 SM00662 RNA polymerases D BJD96_RS03830 SM00382 ATPases associated with a variety of cellular activities BJD96_RS03835 SM00382 ATPases associated with a variety of cellular activities BJD96_RS03870 SM00829 Enoylreductase BJD96_RS03875 SM00829 Enoylreductase BJD96_RS04080 SM00382 ATPases associated with a variety of cellular activities BJD96_RS04105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD96_RS04115 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS04115 SM00895 BJD96_RS04115 BJD96_RS04160 SM01133 BJD96_RS04160 BJD96_RS04165 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BJD96_RS04245 SM00357 Cold shock protein domain BJD96_RS04245 SM00382 ATPases associated with a variety of cellular activities BJD96_RS04245 SM00959 Rho termination factor, N-terminal domain BJD96_RS04260 SM00937 BJD96_RS04260 BJD96_RS04275 SM00226 Low molecular weight phosphatase family BJD96_RS04335 SM00382 ATPases associated with a variety of cellular activities BJD96_RS04400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD96_RS04405 SM00155 Phospholipase D. Active site motifs. BJD96_RS04445 SM00487 DEAD-like helicases superfamily BJD96_RS04445 SM00490 helicase superfamily c-terminal domain BJD96_RS04470 SM01005 Alanine racemase, C-terminal domain BJD96_RS04485 SM00331 Sigma factor PP2C-like phosphatases BJD96_RS04485 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BJD96_RS04505 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS04505 SM00732 Likely ribonuclease with RNase H fold. BJD96_RS04610 SM01329 BJD96_RS04610 BJD96_RS04615 SM00917 LeuA allosteric (dimerisation) domain BJD96_RS04675 SM00382 ATPases associated with a variety of cellular activities BJD96_RS04680 SM00881 CoA binding domain BJD96_RS04695 SM00354 helix_turn _helix lactose operon repressor BJD96_RS04700 SM00640 Glycosyl hydrolases family 32 BJD96_RS04710 SM00448 cheY-homologous receiver domain BJD96_RS04710 SM00850 LytTr DNA-binding domain BJD96_RS04720 SM00794 Staphylococcal AgrD protein BJD96_RS04725 SM00793 Accessory gene regulator B BJD96_RS04750 SM00883 Chaperonin 10 Kd subunit BJD96_RS04780 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS04785 SM00382 ATPases associated with a variety of cellular activities BJD96_RS04795 SM00382 ATPases associated with a variety of cellular activities BJD96_RS04850 SM01131 BJD96_RS04850 BJD96_RS04900 SM00998 Adenylosuccinate lyase C-terminus BJD96_RS04920 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD96_RS04920 SM00292 breast cancer carboxy-terminal domain BJD96_RS04920 SM00532 Ligase N family BJD96_RS04945 SM00845 GatB domain BJD96_RS04950 SM00046 Diacylglycerol kinase catalytic domain (presumed) BJD96_RS04970 SM00479 BJD96_RS04970 BJD96_RS05010 SM00387 Histidine kinase-like ATPases BJD96_RS05015 SM00421 helix_turn_helix, Lux Regulon BJD96_RS05015 SM00448 cheY-homologous receiver domain BJD96_RS05030 SM00226 Low molecular weight phosphatase family BJD96_RS05095 SM00478 endonuclease III BJD96_RS05105 SM00382 ATPases associated with a variety of cellular activities BJD96_RS05290 SM00062 Bacterial periplasmic substrate-binding proteins BJD96_RS05290 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BJD96_RS05295 SM00382 ATPases associated with a variety of cellular activities BJD96_RS05300 SM00567 E-Z type HEAT repeats BJD96_RS05340 SM00421 helix_turn_helix, Lux Regulon BJD96_RS05340 SM00448 cheY-homologous receiver domain BJD96_RS05365 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS05415 SM00382 ATPases associated with a variety of cellular activities BJD96_RS05510 SM01234 BJD96_RS05510 BJD96_RS05595 SM00047 Lysozyme subfamily 2 BJD96_RS05645 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS05655 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD96_RS05670 SM00450 Rhodanese Homology Domain BJD96_RS05685 SM00363 S4 RNA-binding domain BJD96_RS05715 SM00849 Metallo-beta-lactamase superfamily BJD96_RS05745 SM00843 BJD96_RS05745 BJD96_RS05765 SM00830 Chorismate mutase type II BJD96_RS05770 SM00354 helix_turn _helix lactose operon repressor BJD96_RS05800 SM00363 S4 RNA-binding domain BJD96_RS05805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD96_RS05810 SM00563 Phosphate acyltransferases BJD96_RS05850 SM00363 S4 RNA-binding domain BJD96_RS05850 SM01390 BJD96_RS05850 BJD96_RS05875 SM00981 BJD96_RS05875 BJD96_RS05920 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BJD96_RS05920 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BJD96_RS05935 SM00849 Metallo-beta-lactamase superfamily BJD96_RS05945 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD96_RS05955 SM00481 DNA polymerase alpha chain like domain BJD96_RS05960 SM00919 Malic enzyme, NAD binding domain BJD96_RS05960 SM01274 BJD96_RS05960 BJD96_RS05995 SM01329 BJD96_RS05995 BJD96_RS06000 SM00448 cheY-homologous receiver domain BJD96_RS06000 SM00862 Transcriptional regulatory protein, C terminal BJD96_RS06005 SM00387 Histidine kinase-like ATPases BJD96_RS06005 SM00388 His Kinase A (phosphoacceptor) domain BJD96_RS06010 SM01321 BJD96_RS06010 BJD96_RS06015 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BJD96_RS06015 SM00474 3'-5' exonuclease BJD96_RS06015 SM00475 5'-3' exonuclease BJD96_RS06015 SM00482 DNA polymerase A domain BJD96_RS06020 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD96_RS06020 SM01232 BJD96_RS06020 BJD96_RS06030 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD96_RS06050 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BJD96_RS06090 SM00382 ATPases associated with a variety of cellular activities BJD96_RS06090 SM00994 ClpX C4-type zinc finger BJD96_RS06090 SM01086 C-terminal, D2-small domain, of ClpB protein BJD96_RS06120 SM01004 Delta-aminolevulinic acid dehydratase BJD96_RS06180 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS06180 SM00871 Bacterial transcription activator, effector binding domain BJD96_RS06245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD96_RS06250 SM00382 ATPases associated with a variety of cellular activities BJD96_RS06265 SM01323 BJD96_RS06265 BJD96_RS06285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD96_RS06285 SM00954 Region found in RelA / SpoT proteins BJD96_RS06295 SM00287 Bacterial SH3 domain homologues BJD96_RS06295 SM00646 BJD96_RS06295 BJD96_RS06320 SM00382 ATPases associated with a variety of cellular activities BJD96_RS06340 SM00382 ATPases associated with a variety of cellular activities BJD96_RS06355 SM00028 Tetratricopeptide repeats BJD96_RS06360 SM00382 ATPases associated with a variety of cellular activities BJD96_RS06365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BJD96_RS06375 SM00732 Likely ribonuclease with RNase H fold. BJD96_RS06410 SM00796 Allophanate hydrolase subunit 1 BJD96_RS06415 SM00797 Allophanate hydrolase subunit 2 BJD96_RS06425 SM00878 Biotin carboxylase C-terminal domain BJD96_RS06460 SM01103 BJD96_RS06460 BJD96_RS06470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD96_RS06485 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD96_RS06495 SM00849 Metallo-beta-lactamase superfamily BJD96_RS06510 SM00838 Elongation factor G C-terminus BJD96_RS06515 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD96_RS06535 SM00271 DnaJ molecular chaperone homology domain BJD96_RS06550 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD96_RS06620 SM00400 zinc finger BJD96_RS06620 SM00493 BJD96_RS06620 BJD96_RS06640 SM00487 DEAD-like helicases superfamily BJD96_RS06640 SM00490 helicase superfamily c-terminal domain BJD96_RS06645 SM00518 AP endonuclease family 2 BJD96_RS06650 SM00382 ATPases associated with a variety of cellular activities BJD96_RS06705 SM00849 Metallo-beta-lactamase superfamily BJD96_RS06765 SM00450 Rhodanese Homology Domain BJD96_RS06790 SM00841 Elongation factor P, C-terminal BJD96_RS06790 SM01185 BJD96_RS06790 BJD96_RS06800 SM00878 Biotin carboxylase C-terminal domain BJD96_RS06855 SM00861 Transketolase, pyrimidine binding domain BJD96_RS06880 SM01350 BJD96_RS06880 BJD96_RS06885 SM00642 Alpha-amylase domain BJD96_RS06890 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS06890 SM00871 Bacterial transcription activator, effector binding domain BJD96_RS06950 SM00363 S4 RNA-binding domain BJD96_RS06955 SM00448 cheY-homologous receiver domain BJD96_RS06955 SM00862 Transcriptional regulatory protein, C terminal BJD96_RS06960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD96_RS06960 SM00387 Histidine kinase-like ATPases BJD96_RS06960 SM00388 His Kinase A (phosphoacceptor) domain BJD96_RS06980 SM00487 DEAD-like helicases superfamily BJD96_RS06980 SM00490 helicase superfamily c-terminal domain BJD96_RS06985 SM00257 Lysin motif BJD96_RS06995 SM00870 BJD96_RS06995 BJD96_RS07005 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS07020 SM00411 bacterial (prokaryotic) histone like domain BJD96_RS07040 SM00562 BJD96_RS07040 BJD96_RS07060 SM00028 Tetratricopeptide repeats BJD96_RS07065 SM00914 BJD96_RS07065 BJD96_RS07100 SM00479 BJD96_RS07100 BJD96_RS07100 SM00491 BJD96_RS07100 BJD96_RS07115 SM00478 endonuclease III BJD96_RS07115 SM00525 BJD96_RS07115 BJD96_RS07155 SM00981 BJD96_RS07155 BJD96_RS07175 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BJD96_RS07175 SM00475 5'-3' exonuclease BJD96_RS07200 SM00932 Scaffold protein Nfu/NifU N terminal BJD96_RS07205 SM00567 E-Z type HEAT repeats BJD96_RS07205 SM00932 Scaffold protein Nfu/NifU N terminal BJD96_RS07250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD96_RS07250 SM00245 tail specific protease BJD96_RS07265 SM00014 Acid phosphatase homologues BJD96_RS07270 SM00448 cheY-homologous receiver domain BJD96_RS07270 SM00862 Transcriptional regulatory protein, C terminal BJD96_RS07275 SM00387 Histidine kinase-like ATPases BJD96_RS07275 SM00388 His Kinase A (phosphoacceptor) domain BJD96_RS07280 SM00861 Transketolase, pyrimidine binding domain BJD96_RS07290 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS07295 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS07335 SM00382 ATPases associated with a variety of cellular activities BJD96_RS07340 SM00327 von Willebrand factor (vWF) type A domain BJD96_RS07370 SM00357 Cold shock protein domain BJD96_RS07380 SM01005 Alanine racemase, C-terminal domain BJD96_RS07400 SM01130 BJD96_RS07400 BJD96_RS07405 SM00859 Semialdehyde dehydrogenase, NAD binding domain BJD96_RS07420 SM00382 ATPases associated with a variety of cellular activities BJD96_RS07445 SM00382 ATPases associated with a variety of cellular activities BJD96_RS07645 SM00382 ATPases associated with a variety of cellular activities BJD96_RS07655 SM00354 helix_turn _helix lactose operon repressor BJD96_RS07680 SM00434 DNA Topoisomerase IV BJD96_RS07685 SM00387 Histidine kinase-like ATPases BJD96_RS07685 SM00433 TopoisomeraseII BJD96_RS07690 SM01207 BJD96_RS07690 BJD96_RS07750 SM00644 BJD96_RS07750 BJD96_RS07800 SM00635 Bacterial Ig-like domain 2 BJD96_RS07900 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS07965 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS07990 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS08010 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS08015 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS08025 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS08045 SM00861 Transketolase, pyrimidine binding domain BJD96_RS08070 SM01240 BJD96_RS08070 BJD96_RS08090 SM01060 BJD96_RS08090 BJD96_RS08105 SM00344 helix_turn_helix ASNC type BJD96_RS08110 SM00849 Metallo-beta-lactamase superfamily BJD96_RS08170 SM00318 Staphylococcal nuclease homologues BJD96_RS08205 SM01230 BJD96_RS08205 BJD96_RS08210 SM00422 helix_turn_helix, mercury resistance BJD96_RS08270 SM00853 MutL C terminal dimerisation domain BJD96_RS08270 SM01340 BJD96_RS08270 BJD96_RS08275 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BJD96_RS08275 SM00534 ATPase domain of DNA mismatch repair MUTS family BJD96_RS08290 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD96_RS08335 SM00322 K homology RNA-binding domain BJD96_RS08335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD96_RS08340 SM00382 ATPases associated with a variety of cellular activities BJD96_RS08345 SM00852 Probable molybdopterin binding domain BJD96_RS08380 SM00866 BJD96_RS08380 BJD96_RS08385 SM00382 ATPases associated with a variety of cellular activities BJD96_RS08385 SM00843 BJD96_RS08385 BJD96_RS08390 SM00849 Metallo-beta-lactamase superfamily BJD96_RS08395 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS08395 SM00322 K homology RNA-binding domain BJD96_RS08400 SM01387 BJD96_RS08400 BJD96_RS08405 SM00904 Riboflavin kinase BJD96_RS08445 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS08445 SM00322 K homology RNA-binding domain BJD96_RS08455 SM00479 BJD96_RS08455 BJD96_RS08455 SM00481 DNA polymerase alpha chain like domain BJD96_RS08465 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD96_RS08505 SM00382 ATPases associated with a variety of cellular activities BJD96_RS08505 SM01086 C-terminal, D2-small domain, of ClpB protein BJD96_RS08525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BJD96_RS08525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BJD96_RS08525 SM00493 BJD96_RS08525 BJD96_RS08535 SM00881 CoA binding domain BJD96_RS08600 SM00382 ATPases associated with a variety of cellular activities BJD96_RS08600 SM00962 SRP54-type protein, GTPase domain BJD96_RS08600 SM00963 SRP54-type protein, helical bundle domain BJD96_RS08610 SM00382 ATPases associated with a variety of cellular activities BJD96_RS08610 SM00962 SRP54-type protein, GTPase domain BJD96_RS08610 SM00963 SRP54-type protein, helical bundle domain BJD96_RS08615 SM00968 SMC proteins Flexible Hinge Domain BJD96_RS08620 SM00358 Double-stranded RNA binding motif BJD96_RS08620 SM00535 Ribonuclease III family BJD96_RS08630 SM00822 BJD96_RS08630 BJD96_RS08635 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BJD96_RS08655 SM00487 DEAD-like helicases superfamily BJD96_RS08655 SM00490 helicase superfamily c-terminal domain BJD96_RS08670 SM01120 BJD96_RS08670 BJD96_RS08670 SM01121 BJD96_RS08670 BJD96_RS08685 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BJD96_RS08700 SM00220 Serine/Threonine protein kinases, catalytic domain BJD96_RS08700 SM00740 BJD96_RS08700 BJD96_RS08705 SM00331 Sigma factor PP2C-like phosphatases BJD96_RS08705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BJD96_RS08800 SM00644 BJD96_RS08800 BJD96_RS08860 SM00635 Bacterial Ig-like domain 2 BJD96_RS08915 SM00507 HNH nucleases BJD96_RS09085 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS09110 SM00487 DEAD-like helicases superfamily BJD96_RS09110 SM00490 helicase superfamily c-terminal domain BJD96_RS09120 SM01409 BJD96_RS09120 BJD96_RS09125 SM00072 Guanylate kinase homologues. BJD96_RS09155 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BJD96_RS09160 SM00851 MGS-like domain BJD96_RS09160 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BJD96_RS09160 SM01209 BJD96_RS09160 BJD96_RS09165 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BJD96_RS09190 SM00363 S4 RNA-binding domain BJD96_RS09215 SM00363 S4 RNA-binding domain BJD96_RS09240 SM00864 Tubulin/FtsZ family, GTPase domain BJD96_RS09240 SM00865 Tubulin/FtsZ family, C-terminal domain BJD96_RS09245 SM00842 Cell division protein FtsA BJD96_RS09265 SM00740 BJD96_RS09265 BJD96_RS09370 SM00465 GIY-YIG type nucleases (URI domain) BJD96_RS09380 SM00463 Small MutS-related domain BJD96_RS09380 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BJD96_RS09380 SM00534 ATPase domain of DNA mismatch repair MUTS family BJD96_RS09385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD96_RS09385 SM00481 DNA polymerase alpha chain like domain BJD96_RS09385 SM00483 DNA polymerase X family BJD96_RS09405 SM00873 B3/4 domain BJD96_RS09405 SM00874 tRNA synthetase B5 domain BJD96_RS09405 SM00896 Ferredoxin-fold anticodon binding domain BJD96_RS09415 SM00967 RNA 2'-O ribose methyltransferase substrate binding BJD96_RS09495 SM00878 Biotin carboxylase C-terminal domain BJD96_RS09520 SM00838 Elongation factor G C-terminus BJD96_RS09590 SM00861 Transketolase, pyrimidine binding domain BJD96_RS09620 SM00849 Metallo-beta-lactamase superfamily BJD96_RS09675 SM00382 ATPases associated with a variety of cellular activities BJD96_RS09685 SM01209 BJD96_RS09685 BJD96_RS09685 SM01210 BJD96_RS09685 BJD96_RS09690 SM00798 AICARFT/IMPCHase bienzyme BJD96_RS09690 SM00851 MGS-like domain BJD96_RS09715 SM01211 BJD96_RS09715 BJD96_RS09735 SM01001 AIR carboxylase BJD96_RS09800 SM00047 Lysozyme subfamily 2 BJD96_RS09800 SM00644 BJD96_RS09800 BJD96_RS09805 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS09885 SM00914 BJD96_RS09885 BJD96_RS09915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD96_RS09980 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD96_RS09980 SM00924 MgtE intracellular N domain BJD96_RS09995 SM00954 Region found in RelA / SpoT proteins BJD96_RS10005 SM01118 BJD96_RS10005 BJD96_RS10050 SM00382 ATPases associated with a variety of cellular activities BJD96_RS10055 SM00382 ATPases associated with a variety of cellular activities BJD96_RS10080 SM00825 Beta-ketoacyl synthase BJD96_RS10095 SM00382 ATPases associated with a variety of cellular activities BJD96_RS10095 SM01086 C-terminal, D2-small domain, of ClpB protein BJD96_RS10205 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJD96_RS10220 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS10230 SM01298 BJD96_RS10230 BJD96_RS10370 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD96_RS10425 SM00644 BJD96_RS10425 BJD96_RS10485 SM00635 Bacterial Ig-like domain 2 BJD96_RS10540 SM00507 HNH nucleases BJD96_RS10695 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS10700 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS10735 SM00382 ATPases associated with a variety of cellular activities BJD96_RS10760 SM00382 ATPases associated with a variety of cellular activities BJD96_RS10760 SM00930 BJD96_RS10760 BJD96_RS10770 SM00493 BJD96_RS10770 BJD96_RS10975 SM00318 Staphylococcal nuclease homologues BJD96_RS10975 SM00894 Excalibur calcium-binding domain BJD96_RS11040 SM00943 Bifunctional DNA primase/polymerase, N-terminal BJD96_RS11060 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS11065 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS11085 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS11085 SM00357 Cold shock protein domain BJD96_RS11085 SM00955 BJD96_RS11085 BJD96_RS11105 SM01192 BJD96_RS11105 BJD96_RS11105 SM01193 BJD96_RS11105 BJD96_RS11125 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD96_RS11195 SM00028 Tetratricopeptide repeats BJD96_RS11215 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11220 SM00487 DEAD-like helicases superfamily BJD96_RS11220 SM00490 helicase superfamily c-terminal domain BJD96_RS11235 SM00257 Lysin motif BJD96_RS11245 SM00957 SecA DEAD-like domain BJD96_RS11245 SM00958 SecA preprotein cross-linking domain BJD96_RS11260 SM00487 DEAD-like helicases superfamily BJD96_RS11260 SM00490 helicase superfamily c-terminal domain BJD96_RS11280 SM00267 diguanylate cyclase BJD96_RS11340 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11390 SM00046 Diacylglycerol kinase catalytic domain (presumed) BJD96_RS11410 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11415 SM00341 Helicase and RNase D C-terminal BJD96_RS11415 SM00487 DEAD-like helicases superfamily BJD96_RS11415 SM00490 helicase superfamily c-terminal domain BJD96_RS11415 SM00956 BJD96_RS11415 BJD96_RS11420 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11435 SM00797 Allophanate hydrolase subunit 2 BJD96_RS11440 SM00796 Allophanate hydrolase subunit 1 BJD96_RS11500 SM01091 Transporter associated domain BJD96_RS11520 SM00420 helix_turn_helix, Deoxyribose operon repressor BJD96_RS11520 SM01134 BJD96_RS11520 BJD96_RS11580 SM00833 Cobalamin synthesis protein cobW C-terminal domain BJD96_RS11585 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS11590 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11595 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11625 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS11700 SM00257 Lysin motif BJD96_RS11715 SM00387 Histidine kinase-like ATPases BJD96_RS11720 SM00448 cheY-homologous receiver domain BJD96_RS11720 SM00862 Transcriptional regulatory protein, C terminal BJD96_RS11740 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11775 SM01120 BJD96_RS11775 BJD96_RS11795 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11810 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11840 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11855 SM00529 Helix-turn-helix diphteria tox regulatory element BJD96_RS11855 SM00899 BJD96_RS11855 BJD96_RS11860 SM00382 ATPases associated with a variety of cellular activities BJD96_RS11945 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS11985 SM00478 endonuclease III BJD96_RS11990 SM00836 DALR anticodon binding domain BJD96_RS11990 SM01016 Arginyl tRNA synthetase N terminal dom BJD96_RS12005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD96_RS12145 SM00986 Uracil DNA glycosylase superfamily BJD96_RS12145 SM00987 UreE urease accessory protein, C-terminal domain BJD96_RS12160 SM01022 BJD96_RS12160 BJD96_RS12195 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BJD96_RS12220 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS12300 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJD96_RS12320 SM00382 ATPases associated with a variety of cellular activities BJD96_RS12365 SM00354 helix_turn _helix lactose operon repressor BJD96_RS12425 SM00882 Coenzyme A transferase BJD96_RS12430 SM00882 Coenzyme A transferase BJD96_RS12460 SM00838 Elongation factor G C-terminus BJD96_RS12460 SM00889 Elongation factor G, domain IV BJD96_RS12480 SM00663 RNA polymerase I subunit A N-terminus BJD96_RS12510 SM00649 Ribosomal protein L11/L12 BJD96_RS12515 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BJD96_RS12540 SM00967 RNA 2'-O ribose methyltransferase substrate binding BJD96_RS12550 SM00840 BJD96_RS12550 BJD96_RS12565 SM00670 Large family of predicted nucleotide-binding domains BJD96_RS12570 SM00382 ATPases associated with a variety of cellular activities BJD96_RS12575 SM00382 ATPases associated with a variety of cellular activities BJD96_RS12575 SM01086 C-terminal, D2-small domain, of ClpB protein BJD96_RS12610 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS12705 SM00905 Dihydroneopterin aldolase BJD96_RS12725 SM00382 ATPases associated with a variety of cellular activities BJD96_RS12735 SM00977 TilS substrate C-terminal domain BJD96_RS12740 SM00316 Ribosomal protein S1-like RNA-binding domain BJD96_RS12750 SM00363 S4 RNA-binding domain BJD96_RS12765 SM00487 DEAD-like helicases superfamily BJD96_RS12765 SM00490 helicase superfamily c-terminal domain BJD96_RS12765 SM00982 BJD96_RS12765 BJD96_RS12765 SM01058 CarD-like/TRCF domain BJD96_RS12780 SM01400 BJD96_RS12780 BJD96_RS12815 SM00650 Ribosomal RNA adenine dimethylases BJD96_RS12820 SM00493 BJD96_RS12820 BJD96_RS12840 SM00465 GIY-YIG type nucleases (URI domain) BJD96_RS12895 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD96_RS12895 SM00493 BJD96_RS12895 BJD96_RS12905 SM00382 ATPases associated with a variety of cellular activities BJD96_RS12920 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS12920 SM00866 BJD96_RS12920 BJD96_RS12925 SM00642 Alpha-amylase domain BJD96_RS12985 SM00014 Acid phosphatase homologues BJD96_RS13005 SM00257 Lysin motif BJD96_RS13110 SM00855 Phosphoglycerate mutase family BJD96_RS13145 SM00357 Cold shock protein domain BJD96_RS13160 SM00835 Cupin BJD96_RS13215 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD96_RS13215 SM01240 BJD96_RS13215 BJD96_RS13260 SM01060 BJD96_RS13260 BJD96_RS13270 SM00850 LytTr DNA-binding domain BJD96_RS13275 SM00382 ATPases associated with a variety of cellular activities BJD96_RS13305 SM00855 Phosphoglycerate mutase family BJD96_RS13365 SM00257 Lysin motif BJD96_RS13365 SM00644 BJD96_RS13365 BJD96_RS13510 SM00966 SpoVT / AbrB like domain BJD96_RS13515 SM00382 ATPases associated with a variety of cellular activities BJD96_RS13555 SM00450 Rhodanese Homology Domain BJD96_RS13555 SM00849 Metallo-beta-lactamase superfamily BJD96_RS13560 SM00450 Rhodanese Homology Domain BJD96_RS13585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD96_RS13595 SM00382 ATPases associated with a variety of cellular activities BJD96_RS13620 SM00014 Acid phosphatase homologues BJD96_RS13710 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS13725 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD96_RS13760 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD96_RS13760 SM00866 BJD96_RS13760 BJD96_RS13795 SM00470 ParB-like nuclease domain BJD96_RS13840 SM00850 LytTr DNA-binding domain BJD96_RS13870 SM00882 Coenzyme A transferase BJD96_RS13885 SM00382 ATPases associated with a variety of cellular activities BJD96_RS13910 SM00342 helix_turn_helix, arabinose operon control protein BJD96_RS13930 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD96_RS13930 SM00924 MgtE intracellular N domain BJD96_RS13935 SM00014 Acid phosphatase homologues BJD96_RS13950 SM00899 BJD96_RS13950 BJD96_RS14010 SM00470 ParB-like nuclease domain BJD96_RS14020 SM01228 BJD96_RS14020 BJD96_RS14085 SM00857 Resolvase, N terminal domain BJD96_RS14110 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD96_RS14170 SM00487 DEAD-like helicases superfamily BJD96_RS14195 SM00857 Resolvase, N terminal domain BJD96_RS14215 SM00829 Enoylreductase BJD96_RS14225 SM00857 Resolvase, N terminal domain BJD96_RS14245 SM00100 Cyclic nucleotide-monophosphate binding domain BJD96_RS14245 SM00419 helix_turn_helix, cAMP Regulatory protein BJD96_RS14275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD96_RS14340 SM00530 Helix-turn-helix XRE-family like proteins BJD96_RS14510 SM00507 HNH nucleases