locus-tag	class	description
HOQ78_gp009	COG1388	LysM domain
HOQ78_gp015	COG1388	LysM domain
HOQ78_gp015	COG5632	N-Acetylmuramoyl-L-alanine amidase
HOQ78_gp132	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
HOQ78_gp136	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HOQ78_gp136	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HOQ78_gp146	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HOQ78_gp147	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HOQ78_gp148	COG1780	Probably involved in ribonucleotide reductase function
HOQ78_gp154	COG0419	ATPase involved in DNA repair
HOQ78_gp156	COG0420	3'-5' exonuclease activity
HOQ78_gp157	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HOQ78_gp159	COG1201	RNA secondary structure unwinding
HOQ78_gp173	COG0584	glycerophosphoryl diester phosphodiesterase
HOQ78_gp175	COG1705	Flagellar rod assembly protein muramidase FlgJ
HOQ78_gp175	COG3942	CHAP domain