locus-tag	class	description
HOQ80_gp089	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
HOQ80_gp093	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HOQ80_gp093	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HOQ80_gp098	COG0776	regulation of translation
HOQ80_gp102	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HOQ80_gp103	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HOQ80_gp104	COG1780	Probably involved in ribonucleotide reductase function
HOQ80_gp110	COG0419	ATPase involved in DNA repair
HOQ80_gp112	COG0420	3'-5' exonuclease activity
HOQ80_gp113	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HOQ80_gp115	COG1201	RNA secondary structure unwinding
HOQ80_gp127	COG0584	glycerophosphoryl diester phosphodiesterase
HOQ80_gp129	COG1705	Flagellar rod assembly protein muramidase FlgJ
HOQ80_gp129	COG3942	CHAP domain
HOQ80_gp166	COG5632	N-Acetylmuramoyl-L-alanine amidase
HOQ80_gp166	COG1388	LysM domain
HOQ80_gp172	COG1388	LysM domain