locus-tag	class	description
HOQ81_gp035	COG3942	CHAP domain
HOQ81_gp035	COG1705	Flagellar rod assembly protein muramidase FlgJ
HOQ81_gp037	COG0584	glycerophosphoryl diester phosphodiesterase
HOQ81_gp049	COG1201	RNA secondary structure unwinding
HOQ81_gp051	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HOQ81_gp052	COG0420	3'-5' exonuclease activity
HOQ81_gp054	COG0419	ATPase involved in DNA repair
HOQ81_gp060	COG1780	Probably involved in ribonucleotide reductase function
HOQ81_gp061	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HOQ81_gp062	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HOQ81_gp066	COG0776	regulation of translation
HOQ81_gp071	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HOQ81_gp071	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HOQ81_gp075	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
HOQ81_gp166	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
HOQ81_gp201	COG1388	LysM domain
HOQ81_gp207	COG5632	N-Acetylmuramoyl-L-alanine amidase
HOQ81_gp207	COG1388	LysM domain