SPSE_RS00005 SM00382 ATPases associated with a variety of cellular activities SPSE_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SPSE_RS00010 SM00480 DNA polymerase III beta subunit SPSE_RS00030 SM00387 Histidine kinase-like ATPases SPSE_RS00030 SM00433 TopoisomeraseII SPSE_RS00035 SM00434 DNA Topoisomerase IV SPSE_RS00075 SM00267 diguanylate cyclase SPSE_RS00085 SM00382 ATPases associated with a variety of cellular activities SPSE_RS00090 SM00788 Adenylosuccinate synthetase SPSE_RS00115 SM00448 cheY-homologous receiver domain SPSE_RS00115 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS00120 SM00091 PAS domain SPSE_RS00120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPSE_RS00120 SM00387 Histidine kinase-like ATPases SPSE_RS00120 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS00135 SM00849 Metallo-beta-lactamase superfamily SPSE_RS00170 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SPSE_RS00170 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SPSE_RS00190 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS00200 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS00205 SM00257 Lysin motif SPSE_RS00210 SM00257 Lysin motif SPSE_RS00215 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS00215 SM00866 SPSE_RS00215 SPSE_RS00235 SM00422 helix_turn_helix, mercury resistance SPSE_RS00250 SM00829 Enoylreductase SPSE_RS00320 SM00644 SPSE_RS00320 SPSE_RS00370 SM00354 helix_turn _helix lactose operon repressor SPSE_RS00390 SM00642 Alpha-amylase domain SPSE_RS00415 SM00382 ATPases associated with a variety of cellular activities SPSE_RS00460 SM00382 ATPases associated with a variety of cellular activities SPSE_RS00480 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS00480 SM00866 SPSE_RS00480 SPSE_RS00495 SM01133 SPSE_RS00495 SPSE_RS00530 SM00867 YceI-like domain SPSE_RS00550 SM00346 helix_turn_helix isocitrate lyase regulation SPSE_RS00555 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS00565 SM00829 Enoylreductase SPSE_RS00575 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS00650 SM00344 helix_turn_helix ASNC type SPSE_RS00675 SM01060 SPSE_RS00675 SPSE_RS00720 SM00382 ATPases associated with a variety of cellular activities SPSE_RS00800 SM00957 SecA DEAD-like domain SPSE_RS00800 SM00958 SecA preprotein cross-linking domain SPSE_RS00835 SM00882 Coenzyme A transferase SPSE_RS00860 SM00382 ATPases associated with a variety of cellular activities SPSE_RS00880 SM00354 helix_turn _helix lactose operon repressor SPSE_RS00905 SM00448 cheY-homologous receiver domain SPSE_RS00905 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS00910 SM00387 Histidine kinase-like ATPases SPSE_RS00910 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS00995 SM00342 helix_turn_helix, arabinose operon control protein SPSE_RS00995 SM00448 cheY-homologous receiver domain SPSE_RS01030 SM01038 Beta galactosidase small chain SPSE_RS01045 SM00155 Phospholipase D. Active site motifs. SPSE_RS01065 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS01080 SM00098 Alkaline phosphatase homologues SPSE_RS01090 SM00487 DEAD-like helicases superfamily SPSE_RS01090 SM00490 helicase superfamily c-terminal domain SPSE_RS01170 SM01133 SPSE_RS01170 SPSE_RS01185 SM00387 Histidine kinase-like ATPases SPSE_RS01190 SM00448 cheY-homologous receiver domain SPSE_RS01190 SM00850 LytTr DNA-binding domain SPSE_RS01210 SM01120 SPSE_RS01210 SPSE_RS01245 SM00422 helix_turn_helix, mercury resistance SPSE_RS01260 SM00047 Lysozyme subfamily 2 SPSE_RS01295 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01300 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01375 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01485 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS01495 SM00954 Region found in RelA / SpoT proteins SPSE_RS01625 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01630 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01635 SM00422 helix_turn_helix, mercury resistance SPSE_RS01690 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SPSE_RS01720 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01725 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01745 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01750 SM00382 ATPases associated with a variety of cellular activities SPSE_RS01905 SM00836 DALR anticodon binding domain SPSE_RS01905 SM01016 Arginyl tRNA synthetase N terminal dom SPSE_RS01915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SPSE_RS01940 SM00387 Histidine kinase-like ATPases SPSE_RS01945 SM00421 helix_turn_helix, Lux Regulon SPSE_RS01945 SM00448 cheY-homologous receiver domain SPSE_RS01990 SM00342 helix_turn_helix, arabinose operon control protein SPSE_RS02005 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS02045 SM00829 Enoylreductase SPSE_RS02080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPSE_RS02080 SM00387 Histidine kinase-like ATPases SPSE_RS02080 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS02085 SM00448 cheY-homologous receiver domain SPSE_RS02085 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS02095 SM00382 ATPases associated with a variety of cellular activities SPSE_RS02110 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS02160 SM00833 Cobalamin synthesis protein cobW C-terminal domain SPSE_RS02170 SM00382 ATPases associated with a variety of cellular activities SPSE_RS02185 SM00342 helix_turn_helix, arabinose operon control protein SPSE_RS02225 SM00382 ATPases associated with a variety of cellular activities SPSE_RS02360 SM00420 helix_turn_helix, Deoxyribose operon repressor SPSE_RS02390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SPSE_RS02390 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SPSE_RS02405 SM00047 Lysozyme subfamily 2 SPSE_RS02490 SM01130 SPSE_RS02490 SPSE_RS02495 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS02495 SM00895 SPSE_RS02495 SPSE_RS02520 SM00354 helix_turn _helix lactose operon repressor SPSE_RS02550 SM00382 ATPases associated with a variety of cellular activities SPSE_RS02560 SM00852 Probable molybdopterin binding domain SPSE_RS02570 SM00852 Probable molybdopterin binding domain SPSE_RS02595 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS02605 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS02650 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPSE_RS02650 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSE_RS02650 SM00493 SPSE_RS02650 SPSE_RS02670 SM01403 SPSE_RS02670 SPSE_RS02690 SM01382 SPSE_RS02690 SPSE_RS02690 SM01383 SPSE_RS02690 SPSE_RS02705 SM00322 K homology RNA-binding domain SPSE_RS02725 SM01374 SPSE_RS02725 SPSE_RS02730 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPSE_RS02785 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS02805 SM00662 RNA polymerases D SPSE_RS02815 SM00382 ATPases associated with a variety of cellular activities SPSE_RS02820 SM00382 ATPases associated with a variety of cellular activities SPSE_RS02865 SM00420 helix_turn_helix, Deoxyribose operon repressor SPSE_RS02865 SM01134 SPSE_RS02865 SPSE_RS02880 SM01133 SPSE_RS02880 SPSE_RS02920 SM00829 Enoylreductase SPSE_RS03140 SM00382 ATPases associated with a variety of cellular activities SPSE_RS03155 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS03155 SM00895 SPSE_RS03155 SPSE_RS03195 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SPSE_RS03285 SM00357 Cold shock protein domain SPSE_RS03285 SM00382 ATPases associated with a variety of cellular activities SPSE_RS03285 SM00959 Rho termination factor, N-terminal domain SPSE_RS03300 SM00937 SPSE_RS03300 SPSE_RS03315 SM00226 Low molecular weight phosphatase family SPSE_RS03375 SM00382 ATPases associated with a variety of cellular activities SPSE_RS03440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSE_RS03445 SM00155 Phospholipase D. Active site motifs. SPSE_RS03495 SM00487 DEAD-like helicases superfamily SPSE_RS03495 SM00490 helicase superfamily c-terminal domain SPSE_RS03520 SM01005 Alanine racemase, C-terminal domain SPSE_RS03535 SM00331 Sigma factor PP2C-like phosphatases SPSE_RS03535 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SPSE_RS03555 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS03555 SM00732 Likely ribonuclease with RNase H fold. SPSE_RS03560 SM00731 SprT homologues. SPSE_RS03610 SM01329 SPSE_RS03610 SPSE_RS03615 SM00917 LeuA allosteric (dimerisation) domain SPSE_RS03660 SM00534 ATPase domain of DNA mismatch repair MUTS family SPSE_RS03665 SM00382 ATPases associated with a variety of cellular activities SPSE_RS03670 SM00881 CoA binding domain SPSE_RS03680 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS03695 SM00354 helix_turn _helix lactose operon repressor SPSE_RS03700 SM00640 Glycosyl hydrolases family 32 SPSE_RS03710 SM00448 cheY-homologous receiver domain SPSE_RS03710 SM00850 LytTr DNA-binding domain SPSE_RS03720 SM00794 Staphylococcal AgrD protein SPSE_RS03725 SM00793 Accessory gene regulator B SPSE_RS03745 SM00883 Chaperonin 10 Kd subunit SPSE_RS03790 SM00382 ATPases associated with a variety of cellular activities SPSE_RS03800 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS03800 SM00895 SPSE_RS03800 SPSE_RS03860 SM01131 SPSE_RS03860 SPSE_RS03905 SM00998 Adenylosuccinate lyase C-terminus SPSE_RS03930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSE_RS03930 SM00292 breast cancer carboxy-terminal domain SPSE_RS03930 SM00532 Ligase N family SPSE_RS03955 SM00845 GatB domain SPSE_RS03960 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPSE_RS03985 SM00382 ATPases associated with a variety of cellular activities SPSE_RS04020 SM00479 SPSE_RS04020 SPSE_RS04060 SM00387 Histidine kinase-like ATPases SPSE_RS04065 SM00421 helix_turn_helix, Lux Regulon SPSE_RS04065 SM00448 cheY-homologous receiver domain SPSE_RS04070 SM00947 Carbonic anhydrase SPSE_RS04085 SM00226 Low molecular weight phosphatase family SPSE_RS04150 SM00478 endonuclease III SPSE_RS04160 SM00382 ATPases associated with a variety of cellular activities SPSE_RS04425 SM00062 Bacterial periplasmic substrate-binding proteins SPSE_RS04425 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SPSE_RS04430 SM00382 ATPases associated with a variety of cellular activities SPSE_RS04475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SPSE_RS04475 SM00387 Histidine kinase-like ATPases SPSE_RS04480 SM00421 helix_turn_helix, Lux Regulon SPSE_RS04480 SM00448 cheY-homologous receiver domain SPSE_RS04495 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS04535 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS04550 SM00382 ATPases associated with a variety of cellular activities SPSE_RS04660 SM00855 Phosphoglycerate mutase family SPSE_RS04685 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPSE_RS04695 SM01007 Class II Aldolase and Adducin N-terminal domain SPSE_RS04715 SM01234 SPSE_RS04715 SPSE_RS04790 SM00047 Lysozyme subfamily 2 SPSE_RS04850 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS04865 SM00450 Rhodanese Homology Domain SPSE_RS04880 SM00363 S4 RNA-binding domain SPSE_RS04910 SM00849 Metallo-beta-lactamase superfamily SPSE_RS04940 SM00843 SPSE_RS04940 SPSE_RS04960 SM00830 Chorismate mutase type II SPSE_RS04965 SM00354 helix_turn _helix lactose operon repressor SPSE_RS05000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPSE_RS05005 SM00563 Phosphate acyltransferases SPSE_RS05070 SM00363 S4 RNA-binding domain SPSE_RS05070 SM01390 SPSE_RS05070 SPSE_RS05095 SM00981 SPSE_RS05095 SPSE_RS05135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SPSE_RS05135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SPSE_RS05150 SM00849 Metallo-beta-lactamase superfamily SPSE_RS05160 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSE_RS05170 SM00481 DNA polymerase alpha chain like domain SPSE_RS05175 SM00919 Malic enzyme, NAD binding domain SPSE_RS05175 SM01274 SPSE_RS05175 SPSE_RS05205 SM01329 SPSE_RS05205 SPSE_RS05215 SM00448 cheY-homologous receiver domain SPSE_RS05215 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS05220 SM00091 PAS domain SPSE_RS05220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPSE_RS05220 SM00387 Histidine kinase-like ATPases SPSE_RS05220 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS05225 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SPSE_RS05225 SM00474 3'-5' exonuclease SPSE_RS05225 SM00475 5'-3' exonuclease SPSE_RS05225 SM00482 DNA polymerase A domain SPSE_RS05230 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SPSE_RS05230 SM01232 SPSE_RS05230 SPSE_RS05240 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPSE_RS05255 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPSE_RS05300 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05300 SM00994 ClpX C4-type zinc finger SPSE_RS05300 SM01086 C-terminal, D2-small domain, of ClpB protein SPSE_RS05330 SM01004 Delta-aminolevulinic acid dehydratase SPSE_RS05400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSE_RS05405 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05420 SM01323 SPSE_RS05420 SPSE_RS05440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSE_RS05440 SM00954 Region found in RelA / SpoT proteins SPSE_RS05450 SM00287 Bacterial SH3 domain homologues SPSE_RS05450 SM00646 SPSE_RS05450 SPSE_RS05470 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05505 SM00028 Tetratricopeptide repeats SPSE_RS05510 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05515 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SPSE_RS05525 SM00732 Likely ribonuclease with RNase H fold. SPSE_RS05560 SM00796 Allophanate hydrolase subunit 1 SPSE_RS05565 SM00797 Allophanate hydrolase subunit 2 SPSE_RS05575 SM00878 Biotin carboxylase C-terminal domain SPSE_RS05610 SM01103 SPSE_RS05610 SPSE_RS05620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSE_RS05635 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSE_RS05645 SM00849 Metallo-beta-lactamase superfamily SPSE_RS05660 SM00838 Elongation factor G C-terminus SPSE_RS05665 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS05685 SM00271 DnaJ molecular chaperone homology domain SPSE_RS05700 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS05765 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSE_RS05775 SM00400 zinc finger SPSE_RS05775 SM00493 SPSE_RS05775 SPSE_RS05800 SM00487 DEAD-like helicases superfamily SPSE_RS05800 SM00490 helicase superfamily c-terminal domain SPSE_RS05805 SM00518 AP endonuclease family 2 SPSE_RS05810 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05855 SM00382 ATPases associated with a variety of cellular activities SPSE_RS05895 SM00849 Metallo-beta-lactamase superfamily SPSE_RS05950 SM00450 Rhodanese Homology Domain SPSE_RS05975 SM00841 Elongation factor P, C-terminal SPSE_RS05975 SM01185 SPSE_RS05975 SPSE_RS05985 SM00878 Biotin carboxylase C-terminal domain SPSE_RS06015 SM00861 Transketolase, pyrimidine binding domain SPSE_RS06050 SM00861 Transketolase, pyrimidine binding domain SPSE_RS06075 SM01350 SPSE_RS06075 SPSE_RS06095 SM00342 helix_turn_helix, arabinose operon control protein SPSE_RS06095 SM00871 Bacterial transcription activator, effector binding domain SPSE_RS06115 SM00822 SPSE_RS06115 SPSE_RS06155 SM00363 S4 RNA-binding domain SPSE_RS06160 SM00448 cheY-homologous receiver domain SPSE_RS06160 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS06165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPSE_RS06165 SM00387 Histidine kinase-like ATPases SPSE_RS06165 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS06185 SM00487 DEAD-like helicases superfamily SPSE_RS06185 SM00490 helicase superfamily c-terminal domain SPSE_RS06190 SM00257 Lysin motif SPSE_RS06200 SM00870 SPSE_RS06200 SPSE_RS06210 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS06225 SM00411 bacterial (prokaryotic) histone like domain SPSE_RS06245 SM00562 SPSE_RS06245 SPSE_RS06265 SM00028 Tetratricopeptide repeats SPSE_RS06305 SM00479 SPSE_RS06305 SPSE_RS06305 SM00491 SPSE_RS06305 SPSE_RS06320 SM00478 endonuclease III SPSE_RS06320 SM00525 SPSE_RS06320 SPSE_RS06355 SM00981 SPSE_RS06355 SPSE_RS06370 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SPSE_RS06370 SM00475 5'-3' exonuclease SPSE_RS06390 SM00567 E-Z type HEAT repeats SPSE_RS06390 SM00932 Scaffold protein Nfu/NifU N terminal SPSE_RS06435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPSE_RS06435 SM00245 tail specific protease SPSE_RS06450 SM00014 Acid phosphatase homologues SPSE_RS06455 SM00448 cheY-homologous receiver domain SPSE_RS06455 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS06460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SPSE_RS06460 SM00387 Histidine kinase-like ATPases SPSE_RS06460 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS06465 SM00861 Transketolase, pyrimidine binding domain SPSE_RS06490 SM00382 ATPases associated with a variety of cellular activities SPSE_RS06495 SM00327 von Willebrand factor (vWF) type A domain SPSE_RS06530 SM00357 Cold shock protein domain SPSE_RS06545 SM01005 Alanine racemase, C-terminal domain SPSE_RS06565 SM01130 SPSE_RS06565 SPSE_RS06570 SM00859 Semialdehyde dehydrogenase, NAD binding domain SPSE_RS06575 SM00382 ATPases associated with a variety of cellular activities SPSE_RS06660 SM01061 CAT RNA binding domain SPSE_RS06675 SM00434 DNA Topoisomerase IV SPSE_RS06680 SM00387 Histidine kinase-like ATPases SPSE_RS06680 SM00433 TopoisomeraseII SPSE_RS06685 SM01207 SPSE_RS06685 SPSE_RS06740 SM00861 Transketolase, pyrimidine binding domain SPSE_RS06765 SM01240 SPSE_RS06765 SPSE_RS06830 SM00318 Staphylococcal nuclease homologues SPSE_RS06840 SM00318 Staphylococcal nuclease homologues SPSE_RS06890 SM01230 SPSE_RS06890 SPSE_RS06895 SM00422 helix_turn_helix, mercury resistance SPSE_RS06955 SM00853 MutL C terminal dimerisation domain SPSE_RS06955 SM01340 SPSE_RS06955 SPSE_RS06960 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPSE_RS06960 SM00534 ATPase domain of DNA mismatch repair MUTS family SPSE_RS06975 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS07005 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPSE_RS07015 SM00322 K homology RNA-binding domain SPSE_RS07015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSE_RS07020 SM00382 ATPases associated with a variety of cellular activities SPSE_RS07025 SM00852 Probable molybdopterin binding domain SPSE_RS07060 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS07060 SM00866 SPSE_RS07060 SPSE_RS07065 SM00382 ATPases associated with a variety of cellular activities SPSE_RS07065 SM00843 SPSE_RS07065 SPSE_RS07070 SM00849 Metallo-beta-lactamase superfamily SPSE_RS07075 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS07075 SM00322 K homology RNA-binding domain SPSE_RS07080 SM01387 SPSE_RS07080 SPSE_RS07085 SM00904 Riboflavin kinase SPSE_RS07120 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS07120 SM00322 K homology RNA-binding domain SPSE_RS07130 SM00479 SPSE_RS07130 SPSE_RS07130 SM00481 DNA polymerase alpha chain like domain SPSE_RS07185 SM00382 ATPases associated with a variety of cellular activities SPSE_RS07185 SM01086 C-terminal, D2-small domain, of ClpB protein SPSE_RS07205 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPSE_RS07205 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSE_RS07205 SM00493 SPSE_RS07205 SPSE_RS07215 SM00881 CoA binding domain SPSE_RS07355 SM00382 ATPases associated with a variety of cellular activities SPSE_RS07355 SM00962 SRP54-type protein, GTPase domain SPSE_RS07355 SM00963 SRP54-type protein, helical bundle domain SPSE_RS07365 SM00382 ATPases associated with a variety of cellular activities SPSE_RS07365 SM00962 SRP54-type protein, GTPase domain SPSE_RS07365 SM00963 SRP54-type protein, helical bundle domain SPSE_RS07370 SM00968 SMC proteins Flexible Hinge Domain SPSE_RS07375 SM00358 Double-stranded RNA binding motif SPSE_RS07375 SM00535 Ribonuclease III family SPSE_RS07385 SM00822 SPSE_RS07385 SPSE_RS07390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SPSE_RS07405 SM00487 DEAD-like helicases superfamily SPSE_RS07405 SM00490 helicase superfamily c-terminal domain SPSE_RS07420 SM01120 SPSE_RS07420 SPSE_RS07420 SM01121 SPSE_RS07420 SPSE_RS07435 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SPSE_RS07455 SM00220 Serine/Threonine protein kinases, catalytic domain SPSE_RS07455 SM00740 SPSE_RS07455 SPSE_RS07460 SM00331 Sigma factor PP2C-like phosphatases SPSE_RS07460 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SPSE_RS07485 SM00487 DEAD-like helicases superfamily SPSE_RS07485 SM00490 helicase superfamily c-terminal domain SPSE_RS07495 SM01409 SPSE_RS07495 SPSE_RS07500 SM00072 Guanylate kinase homologues. SPSE_RS07520 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPSE_RS07535 SM00851 MGS-like domain SPSE_RS07535 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SPSE_RS07535 SM01209 SPSE_RS07535 SPSE_RS07540 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SPSE_RS07565 SM00363 S4 RNA-binding domain SPSE_RS07585 SM00363 S4 RNA-binding domain SPSE_RS07610 SM01130 SPSE_RS07610 SPSE_RS07650 SM00864 Tubulin/FtsZ family, GTPase domain SPSE_RS07650 SM00865 Tubulin/FtsZ family, C-terminal domain SPSE_RS07655 SM00842 Cell division protein FtsA SPSE_RS07675 SM00740 SPSE_RS07675 SPSE_RS07780 SM00465 GIY-YIG type nucleases (URI domain) SPSE_RS07790 SM00463 Small MutS-related domain SPSE_RS07790 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SPSE_RS07790 SM00534 ATPase domain of DNA mismatch repair MUTS family SPSE_RS07795 SM00481 DNA polymerase alpha chain like domain SPSE_RS07795 SM00483 DNA polymerase X family SPSE_RS07820 SM00873 B3/4 domain SPSE_RS07820 SM00874 tRNA synthetase B5 domain SPSE_RS07820 SM00896 Ferredoxin-fold anticodon binding domain SPSE_RS07830 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPSE_RS07900 SM00878 Biotin carboxylase C-terminal domain SPSE_RS07940 SM00838 Elongation factor G C-terminus SPSE_RS07985 SM00382 ATPases associated with a variety of cellular activities SPSE_RS07990 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS08010 SM00861 Transketolase, pyrimidine binding domain SPSE_RS08040 SM00849 Metallo-beta-lactamase superfamily SPSE_RS08100 SM00382 ATPases associated with a variety of cellular activities SPSE_RS08110 SM01209 SPSE_RS08110 SPSE_RS08110 SM01210 SPSE_RS08110 SPSE_RS08115 SM00798 AICARFT/IMPCHase bienzyme SPSE_RS08115 SM00851 MGS-like domain SPSE_RS08140 SM01211 SPSE_RS08140 SPSE_RS08160 SM01001 AIR carboxylase SPSE_RS08260 SM00382 ATPases associated with a variety of cellular activities SPSE_RS08290 SM00984 UDP binding domain SPSE_RS08315 SM00047 Lysozyme subfamily 2 SPSE_RS08315 SM00644 SPSE_RS08315 SPSE_RS08365 SM00382 ATPases associated with a variety of cellular activities SPSE_RS08435 SM00914 SPSE_RS08435 SPSE_RS08520 SM00650 Ribosomal RNA adenine dimethylases SPSE_RS08535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SPSE_RS08535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SPSE_RS08535 SM00493 SPSE_RS08535 SPSE_RS08540 SM00857 Resolvase, N terminal domain SPSE_RS08590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SPSE_RS08690 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSE_RS08690 SM00924 MgtE intracellular N domain SPSE_RS08705 SM00954 Region found in RelA / SpoT proteins SPSE_RS08715 SM01118 SPSE_RS08715 SPSE_RS08775 SM00382 ATPases associated with a variety of cellular activities SPSE_RS08780 SM00382 ATPases associated with a variety of cellular activities SPSE_RS08800 SM00825 Beta-ketoacyl synthase SPSE_RS08820 SM00382 ATPases associated with a variety of cellular activities SPSE_RS08820 SM01086 C-terminal, D2-small domain, of ClpB protein SPSE_RS08905 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SPSE_RS08920 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS08930 SM00357 Cold shock protein domain SPSE_RS08935 SM00834 Putative regulatory protein SPSE_RS08955 SM01298 SPSE_RS08955 SPSE_RS09065 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS09125 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09150 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09150 SM00930 SPSE_RS09150 SPSE_RS09160 SM00493 SPSE_RS09160 SPSE_RS09255 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS09255 SM00357 Cold shock protein domain SPSE_RS09255 SM00955 SPSE_RS09255 SPSE_RS09275 SM01192 SPSE_RS09275 SPSE_RS09275 SM01193 SPSE_RS09275 SPSE_RS09295 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SPSE_RS09350 SM00028 Tetratricopeptide repeats SPSE_RS09380 SM00487 DEAD-like helicases superfamily SPSE_RS09380 SM00490 helicase superfamily c-terminal domain SPSE_RS09395 SM00937 SPSE_RS09395 SPSE_RS09400 SM00957 SecA DEAD-like domain SPSE_RS09400 SM00958 SecA preprotein cross-linking domain SPSE_RS09415 SM00487 DEAD-like helicases superfamily SPSE_RS09415 SM00490 helicase superfamily c-terminal domain SPSE_RS09435 SM00267 diguanylate cyclase SPSE_RS09550 SM00046 Diacylglycerol kinase catalytic domain (presumed) SPSE_RS09570 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09575 SM00341 Helicase and RNase D C-terminal SPSE_RS09575 SM00487 DEAD-like helicases superfamily SPSE_RS09575 SM00490 helicase superfamily c-terminal domain SPSE_RS09575 SM00956 SPSE_RS09575 SPSE_RS09580 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09595 SM00797 Allophanate hydrolase subunit 2 SPSE_RS09600 SM00796 Allophanate hydrolase subunit 1 SPSE_RS09655 SM01091 Transporter associated domain SPSE_RS09670 SM00420 helix_turn_helix, Deoxyribose operon repressor SPSE_RS09670 SM01134 SPSE_RS09670 SPSE_RS09745 SM00833 Cobalamin synthesis protein cobW C-terminal domain SPSE_RS09750 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS09755 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09760 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09865 SM00257 Lysin motif SPSE_RS09885 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09890 SM00387 Histidine kinase-like ATPases SPSE_RS09895 SM00448 cheY-homologous receiver domain SPSE_RS09895 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS09945 SM00382 ATPases associated with a variety of cellular activities SPSE_RS09960 SM00899 SPSE_RS09960 SPSE_RS09975 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10010 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10030 SM00470 ParB-like nuclease domain SPSE_RS10090 SM00529 Helix-turn-helix diphteria tox regulatory element SPSE_RS10095 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10215 SM00836 DALR anticodon binding domain SPSE_RS10215 SM01016 Arginyl tRNA synthetase N terminal dom SPSE_RS10230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SPSE_RS10350 SM00226 Low molecular weight phosphatase family SPSE_RS10360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SPSE_RS10405 SM00986 Uracil DNA glycosylase superfamily SPSE_RS10405 SM00987 UreE urease accessory protein, C-terminal domain SPSE_RS10435 SM00855 Phosphoglycerate mutase family SPSE_RS10460 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10495 SM00903 Flavin reductase like domain SPSE_RS10505 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SPSE_RS10545 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10630 SM00838 Elongation factor G C-terminus SPSE_RS10630 SM00889 Elongation factor G, domain IV SPSE_RS10650 SM00663 RNA polymerase I subunit A N-terminus SPSE_RS10680 SM00649 Ribosomal protein L11/L12 SPSE_RS10685 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SPSE_RS10685 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SPSE_RS10705 SM00967 RNA 2'-O ribose methyltransferase substrate binding SPSE_RS10715 SM00840 SPSE_RS10715 SPSE_RS10740 SM00670 Large family of predicted nucleotide-binding domains SPSE_RS10745 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10755 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10780 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10780 SM01086 C-terminal, D2-small domain, of ClpB protein SPSE_RS10820 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS10905 SM00905 Dihydroneopterin aldolase SPSE_RS10925 SM00382 ATPases associated with a variety of cellular activities SPSE_RS10935 SM00977 TilS substrate C-terminal domain SPSE_RS10940 SM00316 Ribosomal protein S1-like RNA-binding domain SPSE_RS10950 SM00363 S4 RNA-binding domain SPSE_RS10965 SM00487 DEAD-like helicases superfamily SPSE_RS10965 SM00490 helicase superfamily c-terminal domain SPSE_RS10965 SM00982 SPSE_RS10965 SPSE_RS10965 SM01058 CarD-like/TRCF domain SPSE_RS10980 SM01400 SPSE_RS10980 SPSE_RS11015 SM00650 Ribosomal RNA adenine dimethylases SPSE_RS11020 SM00493 SPSE_RS11020 SPSE_RS11100 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SPSE_RS11100 SM00493 SPSE_RS11100 SPSE_RS11110 SM00382 ATPases associated with a variety of cellular activities SPSE_RS11120 SM00345 helix_turn_helix gluconate operon transcriptional repressor SPSE_RS11120 SM00866 SPSE_RS11120 SPSE_RS11125 SM00642 Alpha-amylase domain SPSE_RS11185 SM00257 Lysin motif SPSE_RS11220 SM00448 cheY-homologous receiver domain SPSE_RS11220 SM00862 Transcriptional regulatory protein, C terminal SPSE_RS11225 SM00387 Histidine kinase-like ATPases SPSE_RS11225 SM00388 His Kinase A (phosphoacceptor) domain SPSE_RS11310 SM00450 Rhodanese Homology Domain SPSE_RS11310 SM00849 Metallo-beta-lactamase superfamily SPSE_RS11315 SM00450 Rhodanese Homology Domain SPSE_RS11360 SM00857 Resolvase, N terminal domain SPSE_RS11380 SM00382 ATPases associated with a variety of cellular activities SPSE_RS11385 SM00382 ATPases associated with a variety of cellular activities SPSE_RS11445 SM00318 Staphylococcal nuclease homologues SPSE_RS11445 SM00894 Excalibur calcium-binding domain SPSE_RS11515 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS11570 SM00889 Elongation factor G, domain IV SPSE_RS11575 SM00530 Helix-turn-helix XRE-family like proteins SPSE_RS11605 SM00116 Domain in cystathionine beta-synthase and other proteins. SPSE_RS11605 SM01240 SPSE_RS11605 SPSE_RS11645 SM00382 ATPases associated with a variety of cellular activities SPSE_RS11680 SM00729 Elongator protein 3, MiaB family, Radical SAM SPSE_RS11680 SM00876 Biotin and Thiamin Synthesis associated domain SPSE_RS11690 SM00382 ATPases associated with a variety of cellular activities SPSE_RS11690 SM00930 SPSE_RS11690 SPSE_RS11710 SM01060 SPSE_RS11710 SPSE_RS11745 SM00382 ATPases associated with a variety of cellular activities SPSE_RS11775 SM00470 ParB-like nuclease domain SPSE_RS11815 SM00988 UreE urease accessory protein, N-terminal domain SPSE_RS11830 SM00347 helix_turn_helix multiple antibiotic resistance protein SPSE_RS11840 SM00903 Flavin reductase like domain SPSE_RS11860 SM00470 ParB-like nuclease domain SPSE_RS11870 SM01228 SPSE_RS11870