locus-tag	class	description
DNH96_RS00005	COG1760	l-serine dehydratase
DNH96_RS00010	COG1760	l-serine dehydratase
DNH96_RS00020	COG1349	DNA-binding transcription factor activity
DNH96_RS00025	COG0416	fatty acid biosynthetic process
DNH96_RS00040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNH96_RS00045	COG0571	ribonuclease III activity
DNH96_RS00050	COG1196	nuclear chromosome segregation
DNH96_RS00055	COG0552	protein localization to endoplasmic reticulum
DNH96_RS00060	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DNH96_RS00065	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DNH96_RS00085	COG1401	restriction endodeoxyribonuclease activity
DNH96_RS00095	COG0228	four-way junction DNA binding
DNH96_RS00100	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DNH96_RS00105	COG0336	Belongs to the RNA methyltransferase TrmD family
DNH96_RS00145	COG4485	Bacterial membrane protein, YfhO
DNH96_RS00160	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNH96_RS00170	COG0045	succinate-CoA ligase (ADP-forming) activity
DNH96_RS00180	COG0758	DNA mediated transformation
DNH96_RS00185	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNH96_RS00190	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DNH96_RS00195	COG4974	Belongs to the 'phage' integrase family
DNH96_RS00200	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DNH96_RS00205	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DNH96_RS00210	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DNH96_RS00215	COG0052	Belongs to the universal ribosomal protein uS2 family
DNH96_RS00220	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DNH96_RS00225	COG0528	UMP kinase activity
DNH96_RS00230	COG0233	cytoplasmic translational termination
DNH96_RS00235	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DNH96_RS00240	COG4589	Belongs to the CDS family
DNH96_RS00245	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DNH96_RS00255	COG0442	prolyl-tRNA aminoacylation
DNH96_RS00265	COG0779	Required for maturation of 30S ribosomal subunits
DNH96_RS00270	COG0195	Participates in both transcription termination and antitermination
DNH96_RS00275	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DNH96_RS00280	COG1358	cellular component organization or biogenesis
DNH96_RS00285	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DNH96_RS00295	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DNH96_RS00300	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DNH96_RS00305	COG0196	riboflavin kinase activity
DNH96_RS00315	COG1185	polyribonucleotide nucleotidyltransferase activity
DNH96_RS00330	COG2188	Transcriptional regulator
DNH96_RS00335	COG0612	Peptidase, M16
DNH96_RS00340	COG0612	Peptidase, M16
DNH96_RS00345	COG0300	oxidoreductase activity
DNH96_RS00365	COG1546	Belongs to the CinA family
DNH96_RS00365	COG1058	Belongs to the CinA family
DNH96_RS00370	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DNH96_RS00375	COG1418	mRNA catabolic process
DNH96_RS00395	COG1692	metallophosphoesterase
DNH96_RS00400	COG0674	pyruvate-flavodoxin oxidoreductase activity
DNH96_RS00400	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DNH96_RS00405	COG1013	pyruvate-flavodoxin oxidoreductase activity
DNH96_RS00415	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNH96_RS00435	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DNH96_RS00440	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DNH96_RS00445	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNH96_RS00450	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DNH96_RS00460	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DNH96_RS00465	COG1923	regulation of RNA biosynthetic process
DNH96_RS00470	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DNH96_RS00475	COG2267	carboxylic ester hydrolase activity
DNH96_RS00480	COG0386	Belongs to the glutathione peroxidase family
DNH96_RS00485	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DNH96_RS00490	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DNH96_RS00495	COG0789	Transcriptional regulator
DNH96_RS00515	COG0584	glycerophosphoryl diester phosphodiesterase
DNH96_RS00545	COG1525	nuclease
DNH96_RS00565	COG0527	aspartate kinase activity
DNH96_RS00570	COG0460	homoserine dehydrogenase
DNH96_RS00575	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DNH96_RS00580	COG0083	homoserine kinase activity
DNH96_RS00595	COG0833	amino acid
DNH96_RS00605	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNH96_RS00610	COG0516	GMP reductase activity
DNH96_RS00620	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DNH96_RS00630	COG4224	UPF0291 protein
DNH96_RS00640	COG3763	UPF0154 protein
DNH96_RS00645	COG4846	Membrane protein involved in cytochrome C biogenesis
DNH96_RS00650	COG0420	3'-5' exonuclease activity
DNH96_RS00655	COG0419	ATPase involved in DNA repair
DNH96_RS00660	COG1970	mechanosensitive ion channel activity
DNH96_RS00665	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNH96_RS00675	COG0824	Thioesterase
DNH96_RS00680	COG4841	protein insertion into membrane
DNH96_RS00685	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNH96_RS00695	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNH96_RS00700	COG1115	amino acid carrier protein
DNH96_RS00705	COG3711	transcriptional antiterminator
DNH96_RS00715	COG0628	permease
DNH96_RS00735	COG1942	4-Oxalocrotonate Tautomerase
DNH96_RS00745	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNH96_RS00750	COG0287	Prephenate dehydrogenase
DNH96_RS00755	COG1363	Peptidase, m42
DNH96_RS00785	COG2996	Protein conserved in bacteria
DNH96_RS00790	COG0488	(ABC) transporter
DNH96_RS00795	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNH96_RS00800	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNH96_RS00805	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DNH96_RS00810	COG2171	N-acyltransferase activity
DNH96_RS00815	COG1473	amidohydrolase
DNH96_RS00835	COG1278	Cold shock
DNH96_RS00855	COG3853	Toxic anion resistance protein (TelA)
DNH96_RS00865	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNH96_RS00870	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNH96_RS00875	COG1114	Component of the transport system for branched-chain amino acids
DNH96_RS00880	COG4548	von Willebrand factor, type A
DNH96_RS00885	COG0714	Associated with various cellular activities
DNH96_RS00910	COG0567	Dehydrogenase, E1 component
DNH96_RS00915	COG5002	protein histidine kinase activity
DNH96_RS00925	COG0671	phosphoesterase, PA-phosphatase related
DNH96_RS00930	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNH96_RS00940	COG0793	Belongs to the peptidase S41A family
DNH96_RS00950	COG2190	(PTS) system
DNH96_RS00985	COG1413	lyase activity
DNH96_RS00995	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DNH96_RS01005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNH96_RS01010	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DNH96_RS01015	COG2962	Rard protein
DNH96_RS01020	COG0116	Belongs to the methyltransferase superfamily
DNH96_RS01030	COG3599	regulation of cell shape
DNH96_RS01035	COG4474	Belongs to the UPF0398 family
DNH96_RS01050	COG4499	WXG100 protein secretion system (Wss), protein YukC
DNH96_RS01050	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNH96_RS01060	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DNH96_RS01065	COG3935	DnaD domain protein
DNH96_RS01070	COG0017	Asparaginyl-tRNA synthetase
DNH96_RS01085	COG0617	tRNA 3'-terminal CCA addition
DNH96_RS01090	COG0438	transferase activity, transferring glycosyl groups
DNH96_RS01095	COG1694	Mazg nucleotide pyrophosphohydrolase
DNH96_RS01105	COG4347	Protein of unknown function (DUF1405)
DNH96_RS01110	COG5582	Belongs to the UPF0302 family
DNH96_RS01115	COG0457	Tetratricopeptide repeat
DNH96_RS01125	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DNH96_RS01135	COG0105	UTP biosynthetic process
DNH96_RS01140	COG0142	geranyltranstransferase activity
DNH96_RS01160	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DNH96_RS01165	COG1160	GTP binding
DNH96_RS01170	COG0539	negative regulation of cytoplasmic translation
DNH96_RS01180	COG0252	asparaginase activity
DNH96_RS01185	COG0492	ferredoxin-NADP+ reductase activity
DNH96_RS01195	COG0514	ATP-dependent DNA helicase (RecQ)
DNH96_RS01205	COG1141	Ferredoxin
DNH96_RS01220	COG0745	RESPONSE REGULATOR receiver
DNH96_RS01225	COG1187	pseudouridine synthase activity
DNH96_RS01230	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DNH96_RS01235	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DNH96_RS01250	COG0735	belongs to the Fur family
DNH96_RS01255	COG0494	nUDIX hydrolase
DNH96_RS01260	COG0667	Aldo Keto reductase
DNH96_RS01270	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNH96_RS01275	COG1234	tRNA 3'-trailer cleavage
DNH96_RS01280	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNH96_RS01310	COG2195	Cleaves the N-terminal amino acid of tripeptides
DNH96_RS01320	COG4129	membrane
DNH96_RS01330	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNH96_RS01335	COG0022	dehydrogenase e1 component
DNH96_RS01340	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNH96_RS01345	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNH96_RS01350	COG3426	butyrate kinase activity
DNH96_RS01355	COG0280	phosphate acetyltransferase
DNH96_RS01360	COG0497	DNA recombination
DNH96_RS01365	COG1438	arginine binding
DNH96_RS01370	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DNH96_RS01375	COG0142	geranyltranstransferase activity
DNH96_RS01380	COG1722	exodeoxyribonuclease VII activity
DNH96_RS01385	COG1570	exodeoxyribonuclease VII activity
DNH96_RS01395	COG1302	Protein conserved in bacteria
DNH96_RS01400	COG0439	Biotin carboxylase
DNH96_RS01405	COG0511	ligase activity, forming carbon-carbon bonds
DNH96_RS01410	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DNH96_RS01415	COG0006	proline dipeptidase activity
DNH96_RS01430	COG0095	Lipoate-protein ligase
DNH96_RS01435	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNH96_RS01440	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DNH96_RS01450	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DNH96_RS01455	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DNH96_RS01485	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DNH96_RS01490	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNH96_RS01495	COG0011	TIGRFAM Protein of
DNH96_RS01500	COG1940	carbohydrate kinase activity
DNH96_RS01505	COG4483	Protein conserved in bacteria
DNH96_RS01510	COG0457	Tetratricopeptide repeat
DNH96_RS01510	COG0705	Rhomboid family
DNH96_RS01515	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DNH96_RS01525	COG0704	Plays a role in the regulation of phosphate uptake
DNH96_RS01530	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DNH96_RS01535	COG0581	inorganic phosphate transmembrane transporter activity
DNH96_RS01540	COG0573	inorganic phosphate transmembrane transporter activity
DNH96_RS01545	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DNH96_RS01550	COG0768	penicillin binding
DNH96_RS01560	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DNH96_RS01565	COG0735	belongs to the Fur family
DNH96_RS01570	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DNH96_RS01575	COG1121	(ABC) transporter
DNH96_RS01580	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DNH96_RS01585	COG0513	Belongs to the DEAD box helicase family
DNH96_RS01590	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DNH96_RS01595	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNH96_RS01600	COG2384	SAM-dependent methyltransferase
DNH96_RS01605	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DNH96_RS01610	COG0358	DNA primase activity
DNH96_RS01615	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
DNH96_RS01620	COG0517	IMP dehydrogenase activity
DNH96_RS01625	COG0423	glycine-tRNA ligase activity
DNH96_RS01630	COG1381	Involved in DNA repair and RecF pathway recombination
DNH96_RS01635	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DNH96_RS01645	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DNH96_RS01655	COG1702	phosphate starvation-inducible protein PhoH
DNH96_RS01665	COG4864	UPF0365 protein
DNH96_RS01670	COG1030	water channel activity
DNH96_RS01685	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNH96_RS01690	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DNH96_RS01695	COG2264	protein methyltransferase activity
DNH96_RS01700	COG0484	heat shock protein binding
DNH96_RS01705	COG0443	Heat shock 70 kDa protein
DNH96_RS01720	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DNH96_RS01730	COG0268	Binds directly to 16S ribosomal RNA
DNH96_RS01735	COG1466	dna polymerase III delta subunit
DNH96_RS01740	COG0658	competence protein
DNH96_RS01740	COG2333	competence protein COMEC
DNH96_RS01745	COG2131	deaminase
DNH96_RS01750	COG1555	photosystem II stabilization
DNH96_RS01750	COG1596	polysaccharide export
DNH96_RS01755	COG2226	methyltransferase
DNH96_RS01760	COG0799	negative regulation of ribosome biogenesis
DNH96_RS01765	COG1713	HD superfamily hydrolase involved in NAD metabolism
DNH96_RS01775	COG1534	Rna-binding protein
DNH96_RS01780	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DNH96_RS01785	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DNH96_RS01790	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DNH96_RS01795	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DNH96_RS01800	COG1914	H( )-stimulated, divalent metal cation uptake system
DNH96_RS01805	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
DNH96_RS01810	COG0439	Biotin carboxylase
DNH96_RS01815	COG0511	ligase activity, forming carbon-carbon bonds
DNH96_RS01820	COG1984	allophanate hydrolase subunit 2
DNH96_RS01825	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DNH96_RS01835	COG0572	uridine kinase
DNH96_RS01840	COG0826	peptidase U32
DNH96_RS01845	COG0826	peptidase U32
DNH96_RS01850	COG4122	O-methyltransferase activity
DNH96_RS01855	COG3906	Belongs to the UPF0473 family
DNH96_RS01860	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DNH96_RS01865	COG4472	Bacterial protein of unknown function (DUF965)
DNH96_RS01870	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNH96_RS01875	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DNH96_RS01885	COG0482	sulfurtransferase activity
DNH96_RS01890	COG1104	cysteine desulfurase activity
DNH96_RS01895	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNH96_RS01910	COG1959	2 iron, 2 sulfur cluster binding
DNH96_RS01915	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DNH96_RS01920	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DNH96_RS01930	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DNH96_RS01940	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNH96_RS01945	COG1490	D-aminoacyl-tRNA deacylase activity
DNH96_RS01955	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNH96_RS01960	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DNH96_RS01960	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DNH96_RS01965	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DNH96_RS01965	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DNH96_RS01970	COG1862	Preprotein translocase
DNH96_RS01980	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DNH96_RS01990	COG0632	four-way junction helicase activity
DNH96_RS02000	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DNH96_RS02010	COG2868	ribosomal protein
DNH96_RS02050	COG2003	Belongs to the UPF0758 family
DNH96_RS02060	COG0285	dihydrofolate synthase activity
DNH96_RS02065	COG0525	valine-tRNA ligase activity
DNH96_RS02070	COG2818	Glycosylase
DNH96_RS02080	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DNH96_RS02095	COG0181	hydroxymethylbilane synthase activity
DNH96_RS02105	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DNH96_RS02110	COG0218	Necessary for normal cell division and for the maintenance of normal septation
DNH96_RS02120	COG0544	peptidyl-prolyl cis-trans isomerase activity
DNH96_RS02135	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DNH96_RS02140	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DNH96_RS02145	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DNH96_RS02155	COG0833	amino acid
DNH96_RS02165	COG1484	DNA-dependent DNA replication
DNH96_RS02170	COG3611	Membrane attachment protein
DNH96_RS02185	COG0237	dephospho-CoA kinase activity
DNH96_RS02195	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNH96_RS02195	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNH96_RS02200	COG5002	protein histidine kinase activity
DNH96_RS02205	COG0745	RESPONSE REGULATOR receiver
DNH96_RS02210	COG0538	isocitrate dehydrogenase activity
DNH96_RS02215	COG0372	Belongs to the citrate synthase family
DNH96_RS02225	COG0469	pyruvate kinase activity
DNH96_RS02230	COG0205	6-phosphofructokinase activity
DNH96_RS02235	COG0825	malonyl-CoA metabolic process
DNH96_RS02240	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DNH96_RS02245	COG0281	malic enzyme
DNH96_RS02250	COG0587	DNA-directed DNA polymerase activity
DNH96_RS02255	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DNH96_RS02260	COG4109	DRTGG domain
DNH96_RS02270	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DNH96_RS02275	COG0006	proline dipeptidase activity
DNH96_RS02285	COG0686	Belongs to the AlaDH PNT family
DNH96_RS02290	COG0589	response to stress
DNH96_RS02295	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNH96_RS02300	COG0827	DNA restriction-modification system
DNH96_RS02305	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DNH96_RS02310	COG1714	RDD family
DNH96_RS02315	COG0616	signal peptide processing
DNH96_RS02325	COG0301	tRNA thio-modification
DNH96_RS02330	COG1104	cysteine desulfurase activity
DNH96_RS02335	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DNH96_RS02340	COG1956	GAF domain-containing protein
DNH96_RS02345	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DNH96_RS02380	COG0456	acetyltransferase
DNH96_RS02415	COG1764	response to oxidative stress
DNH96_RS02420	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DNH96_RS02425	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DNH96_RS02435	COG0204	Acyl-transferase
DNH96_RS02440	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNH96_RS02450	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DNH96_RS02455	COG2759	Belongs to the formate--tetrahydrofolate ligase family
DNH96_RS02460	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNH96_RS02465	COG0454	-acetyltransferase
DNH96_RS02475	COG1609	Transcriptional regulator
DNH96_RS02480	COG1605	Chorismate mutase
DNH96_RS02480	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DNH96_RS02490	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DNH96_RS02495	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DNH96_RS02500	COG1674	ftsk spoiiie
DNH96_RS02505	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNH96_RS02510	COG4848	Belongs to the UPF0354 family
DNH96_RS02515	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNH96_RS02520	COG1363	Peptidase, m42
DNH96_RS02530	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNH96_RS02535	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DNH96_RS02540	COG0510	thiamine kinase activity
DNH96_RS02545	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNH96_RS02550	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNH96_RS02565	COG2244	polysaccharide biosynthetic process
DNH96_RS02570	COG2081	HI0933 family
DNH96_RS02575	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNH96_RS02580	COG0495	leucyl-tRNA aminoacylation
DNH96_RS02585	COG2814	Major facilitator Superfamily
DNH96_RS02590	COG1242	4 iron, 4 sulfur cluster binding
DNH96_RS02595	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DNH96_RS02605	COG0039	L-malate dehydrogenase activity
DNH96_RS02610	COG2267	carboxylic ester hydrolase activity
DNH96_RS02625	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DNH96_RS02630	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DNH96_RS02630	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DNH96_RS02635	COG0307	riboflavin synthase, alpha
DNH96_RS02640	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNH96_RS02640	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNH96_RS02650	COG3266	domain, Protein
DNH96_RS02650	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNH96_RS02650	COG4193	domain, Protein
DNH96_RS02675	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DNH96_RS02685	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNH96_RS02690	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNH96_RS02695	COG0656	L-ascorbic acid biosynthetic process
DNH96_RS02705	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DNH96_RS02710	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
DNH96_RS02715	COG1506	peptidase
DNH96_RS02720	COG0494	nUDIX hydrolase
DNH96_RS02725	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DNH96_RS02745	COG0235	Class ii aldolase
DNH96_RS02750	COG3623	hexulose-6-phosphate isomerase
DNH96_RS02770	COG3037	sugar-specific permease SgaT UlaA
DNH96_RS02840	COG0582	viral genome integration into host DNA
DNH96_RS02860	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNH96_RS02860	COG1388	LysM domain
DNH96_RS02955	COG4695	Portal protein
DNH96_RS03145	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DNH96_RS03205	COG3545	Serine hydrolase
DNH96_RS03210	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DNH96_RS03220	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DNH96_RS03235	COG4473	ABC transporter
DNH96_RS03240	COG1131	(ABC) transporter
DNH96_RS03245	COG0537	adenosine 5'-monophosphoramidase activity
DNH96_RS03255	COG1846	Transcriptional regulator
DNH96_RS03270	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNH96_RS03275	COG3481	metal-dependent phosphohydrolase, HD sub domain
DNH96_RS03285	COG0420	3'-5' exonuclease activity
DNH96_RS03290	COG3679	Belongs to the UPF0342 family
DNH96_RS03295	COG4399	Belongs to the UPF0754 family
DNH96_RS03310	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNH96_RS03315	COG2197	response regulator
DNH96_RS03320	COG2203	Gaf domain
DNH96_RS03320	COG4585	Histidine kinase
DNH96_RS03325	COG0564	pseudouridine synthase activity
DNH96_RS03330	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DNH96_RS03335	COG0248	Ppx GppA phosphatase
DNH96_RS03340	COG0114	fumarate hydratase activity
DNH96_RS03355	COG0363	glucosamine-6-phosphate deaminase activity
DNH96_RS03365	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DNH96_RS03370	COG1126	abc transporter atp-binding protein
DNH96_RS03375	COG0765	amino acid transport
DNH96_RS03540	COG0735	belongs to the Fur family
DNH96_RS03550	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DNH96_RS03555	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DNH96_RS03560	COG4129	membrane
DNH96_RS03565	COG0069	glutamate synthase activity
DNH96_RS03580	COG3557	Belongs to the UPF0374 family
DNH96_RS03585	COG1194	a g-specific adenine glycosylase
DNH96_RS03590	COG1988	membrane-bound metal-dependent
DNH96_RS03600	COG1134	teichoic acid transport
DNH96_RS03600	COG1388	LysM domain
DNH96_RS03610	COG2137	regulation of response to DNA damage stimulus
DNH96_RS03615	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNH96_RS03620	COG0028	Belongs to the TPP enzyme family
DNH96_RS03625	COG0693	protein deglycase activity
DNH96_RS03635	COG0535	radical SAM domain protein
DNH96_RS03640	COG1607	acyl-coa hydrolase
DNH96_RS03645	COG2309	aminopeptidase activity
DNH96_RS03650	COG4840	Belongs to the UPF0435 family
DNH96_RS03665	COG1295	ribonuclease BN
DNH96_RS03670	COG0288	reversible hydration of carbon dioxide
DNH96_RS03695	COG0024	Methionine aminopeptidase
DNH96_RS03700	COG4129	membrane
DNH96_RS03715	COG1528	Iron-storage protein
DNH96_RS03725	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNH96_RS03750	COG0488	(ABC) transporter
DNH96_RS03775	COG1597	lipid kinase activity
DNH96_RS03780	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNH96_RS03790	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNH96_RS03795	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNH96_RS03800	COG4851	CamS sex pheromone cAM373 precursor
DNH96_RS03805	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DNH96_RS03810	COG0210	DNA helicase
DNH96_RS03815	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
DNH96_RS03820	COG4496	protein, YerC YecD
DNH96_RS03825	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DNH96_RS03835	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
DNH96_RS03845	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNH96_RS03855	COG0077	Prephenate dehydratase
DNH96_RS03865	COG1335	isochorismatase
DNH96_RS03870	COG1227	inorganic diphosphatase activity
DNH96_RS03880	COG1012	belongs to the aldehyde dehydrogenase family
DNH96_RS03885	COG2706	6-phosphogluconolactonase activity
DNH96_RS03920	COG2610	gluconate transmembrane transporter activity
DNH96_RS03925	COG1070	Carbohydrate kinase
DNH96_RS03940	COG1131	(ABC) transporter
DNH96_RS03960	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DNH96_RS03965	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNH96_RS04005	COG4512	PFAM Accessory gene regulator B
DNH96_RS04025	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNH96_RS04030	COG1621	beta-fructofuranosidase activity
DNH96_RS04035	COG1609	Transcriptional regulator
DNH96_RS04045	COG2124	cytochrome p450
DNH96_RS04055	COG1846	Transcriptional regulator
DNH96_RS04060	COG2814	Major facilitator Superfamily
DNH96_RS04065	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DNH96_RS04070	COG0488	(ABC) transporter
DNH96_RS04075	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DNH96_RS04085	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DNH96_RS04090	COG0456	acetyltransferase
DNH96_RS04095	COG1214	PFAM Peptidase M22, glycoprotease
DNH96_RS04100	COG0802	atpase or kinase
DNH96_RS04105	COG0129	dihydroxy-acid dehydratase activity
DNH96_RS04110	COG0028	Belongs to the TPP enzyme family
DNH96_RS04120	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNH96_RS04125	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DNH96_RS04135	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DNH96_RS04180	COG3091	SprT-like family
DNH96_RS04185	COG2183	response to ionizing radiation
DNH96_RS04190	COG1191	sigma factor activity
DNH96_RS04200	COG1366	Belongs to the anti-sigma-factor antagonist family
DNH96_RS04205	COG2208	phosphoserine phosphatase activity
DNH96_RS04210	COG2337	Toxic component of a toxin-antitoxin (TA) module
DNH96_RS04220	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNH96_RS04225	COG0736	holo-[acyl-carrier-protein] synthase activity
DNH96_RS04230	COG3402	PFAM membrane-flanked domain
DNH96_RS04245	COG0513	Belongs to the DEAD box helicase family
DNH96_RS04250	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DNH96_RS04255	COG1181	Belongs to the D-alanine--D-alanine ligase family
DNH96_RS04260	COG0772	Belongs to the SEDS family
DNH96_RS04280	COG2217	Heavy metal translocating P-type atpase
DNH96_RS04295	COG1937	Protein conserved in bacteria
DNH96_RS04300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNH96_RS04305	COG1418	mRNA catabolic process
DNH96_RS04310	COG0706	membrane insertase activity
DNH96_RS04315	COG0352	thiamine-phosphate diphosphorylase activity
DNH96_RS04320	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DNH96_RS04330	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNH96_RS04345	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DNH96_RS04375	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DNH96_RS04385	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNH96_RS04395	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNH96_RS04400	COG0356	it plays a direct role in the translocation of protons across the membrane
DNH96_RS04410	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DNH96_RS04415	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DNH96_RS04420	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DNH96_RS04425	COG4475	Protein of unknown function (DUF436)
DNH96_RS04430	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNH96_RS04435	COG0009	L-threonylcarbamoyladenylate synthase
DNH96_RS04440	COG2890	protein-(glutamine-N5) methyltransferase activity
DNH96_RS04445	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DNH96_RS04455	COG0254	rRNA binding
DNH96_RS04460	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DNH96_RS04475	COG1733	regulation of RNA biosynthetic process
DNH96_RS04480	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNH96_RS04485	COG0191	fructose-bisphosphate aldolase activity
DNH96_RS04490	COG4821	SIS domain
DNH96_RS04495	COG2271	Major facilitator Superfamily
DNH96_RS04500	COG0504	CTP synthase activity
DNH96_RS04505	COG3343	RNA polymerase activity
DNH96_RS04530	COG5146	pantothenate kinase activity
DNH96_RS04565	COG0813	purine-nucleoside phosphorylase activity
DNH96_RS04575	COG1757	Na H antiporter
DNH96_RS04590	COG1482	cell wall glycoprotein biosynthetic process
DNH96_RS04595	COG2186	Transcriptional regulator
DNH96_RS04605	COG0561	phosphatase activity
DNH96_RS04610	COG1119	ATPase activity
DNH96_RS04620	COG0210	DNA helicase
DNH96_RS04640	COG3711	transcriptional antiterminator
DNH96_RS04655	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNH96_RS04720	COG0489	protein tyrosine kinase activity
DNH96_RS04725	COG2814	Major facilitator Superfamily
DNH96_RS04745	COG1272	protein, Hemolysin III
DNH96_RS04750	COG4284	Utp--glucose-1-phosphate uridylyltransferase
DNH96_RS04755	COG1988	membrane-bound metal-dependent
DNH96_RS04765	COG3314	Sporulation integral membrane protein YlbJ
DNH96_RS04770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS04775	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS04780	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DNH96_RS04785	COG3457	Alanine racemase
DNH96_RS04790	COG4264	IucA IucC family
DNH96_RS04795	COG2814	Major facilitator Superfamily
DNH96_RS04800	COG4264	IucA IucC family
DNH96_RS04805	COG2814	Major facilitator Superfamily
DNH96_RS04810	COG1302	Protein conserved in bacteria
DNH96_RS04825	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNH96_RS04835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNH96_RS04840	COG0488	(ABC) transporter
DNH96_RS04845	COG2723	6-phospho-beta-galactosidase activity
DNH96_RS04860	COG3684	Belongs to the aldolase LacD family
DNH96_RS04920	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DNH96_RS04940	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DNH96_RS04945	COG0101	tRNA pseudouridine synthase activity
DNH96_RS04955	COG1122	ATPase activity
DNH96_RS04960	COG1122	ATPase activity
DNH96_RS04965	COG0203	ribosomal protein L17
DNH96_RS04970	COG0202	RNA polymerase activity
DNH96_RS04975	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DNH96_RS04985	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DNH96_RS05000	COG0201	protein transport
DNH96_RS05010	COG1841	ribosomal large subunit assembly
DNH96_RS05015	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DNH96_RS05025	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DNH96_RS05030	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DNH96_RS05035	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNH96_RS05050	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DNH96_RS05060	COG0255	Belongs to the universal ribosomal protein uL29 family
DNH96_RS05065	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DNH96_RS05070	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DNH96_RS05075	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DNH96_RS05080	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DNH96_RS05085	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DNH96_RS05090	COG0089	rRNA binding
DNH96_RS05095	COG0088	Forms part of the polypeptide exit tunnel
DNH96_RS05100	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DNH96_RS05120	COG2252	PERMEase
DNH96_RS05150	COG0436	Aminotransferase
DNH96_RS05155	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DNH96_RS05160	COG2348	transferase activity, transferring amino-acyl groups
DNH96_RS05185	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DNH96_RS05190	COG0746	molybdenum cofactor guanylyltransferase activity
DNH96_RS05200	COG0314	molybdopterin synthase activity
DNH96_RS05220	COG0521	Mo-molybdopterin cofactor biosynthetic process
DNH96_RS05225	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNH96_RS05230	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DNH96_RS05235	COG4149	molybdate abc transporter
DNH96_RS05240	COG0725	ABC transporter, periplasmic molybdate-binding protein
DNH96_RS05245	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
DNH96_RS05250	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DNH96_RS05255	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DNH96_RS05260	COG1609	Transcriptional regulator
DNH96_RS05280	COG1268	BioY protein
DNH96_RS05290	COG2186	Transcriptional regulator
DNH96_RS05300	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNH96_RS05305	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNH96_RS05310	COG2832	Protein of unknown function (DUF454)
DNH96_RS05315	COG1960	acyl-CoA dehydrogenase activity
DNH96_RS05335	COG3942	CHAP domain
DNH96_RS05345	COG1757	Na H antiporter
DNH96_RS05355	COG3942	CHAP domain
DNH96_RS05360	COG2076	Multidrug Resistance protein
DNH96_RS05365	COG2076	Multidrug Resistance protein
DNH96_RS05370	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNH96_RS05395	COG3383	formate dehydrogenase (NAD+) activity
DNH96_RS05400	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DNH96_RS05415	COG1316	TRANSCRIPTIONal
DNH96_RS05440	COG1113	amino acid transport
DNH96_RS05465	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DNH96_RS05470	COG0346	lactoylglutathione lyase activity
DNH96_RS05480	COG0385	Bile acid
DNH96_RS05500	COG1473	amidohydrolase
DNH96_RS05505	COG0659	secondary active sulfate transmembrane transporter activity
DNH96_RS05510	COG1228	amidohydrolase
DNH96_RS05515	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
DNH96_RS05520	COG3314	Sporulation integral membrane protein YlbJ
DNH96_RS05525	COG0583	DNA-binding transcription factor activity
DNH96_RS05535	COG1131	(ABC) transporter
DNH96_RS05595	COG2801	Transposase and inactivated derivatives
DNH96_RS05620	COG1266	CAAX protease self-immunity
DNH96_RS05630	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DNH96_RS05635	COG2258	MOSC domain
DNH96_RS05640	COG2017	converts alpha-aldose to the beta-anomer
DNH96_RS05645	COG1742	UPF0060 membrane protein
DNH96_RS05650	COG1668	transmembrane transport
DNH96_RS05655	COG4152	abc transporter atp-binding protein
DNH96_RS05660	COG3152	Membrane
DNH96_RS05665	COG2094	Belongs to the DNA glycosylase MPG family
DNH96_RS05670	COG1757	Na H antiporter
DNH96_RS05690	COG3250	beta-galactosidase activity
DNH96_RS05695	COG2207	Transcriptional regulator
DNH96_RS05700	COG0786	glutamate:sodium symporter activity
DNH96_RS05705	COG0523	cobalamin synthesis protein
DNH96_RS05710	COG1304	FMN binding
DNH96_RS05730	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNH96_RS05740	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNH96_RS05775	COG0577	efflux transmembrane transporter activity
DNH96_RS05790	COG0579	oxidoreductase
DNH96_RS05795	COG0438	transferase activity, transferring glycosyl groups
DNH96_RS05800	COG1620	l-lactate permease
DNH96_RS05815	COG0604	alcohol dehydrogenase
DNH96_RS05820	COG2814	Major facilitator Superfamily
DNH96_RS05825	COG0492	ferredoxin-NADP+ reductase activity
DNH96_RS05845	COG1283	sodium-dependent phosphate transmembrane transporter activity
DNH96_RS05860	COG1263	PTS System
DNH96_RS05860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNH96_RS05870	COG2807	transmembrane transport
DNH96_RS05880	COG0697	spore germination
DNH96_RS05885	COG1363	Peptidase, m42
DNH96_RS05890	COG0039	L-malate dehydrogenase activity
DNH96_RS05900	COG4187	Peptidase family M20/M25/M40
DNH96_RS05910	COG2223	nitrite transmembrane transporter activity
DNH96_RS05915	COG2197	response regulator
DNH96_RS05920	COG4585	Histidine kinase
DNH96_RS05930	COG2181	nitrate reductase activity
DNH96_RS05940	COG1140	nitrate reductase beta subunit
DNH96_RS05945	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DNH96_RS05965	COG0018	arginyl-trna synthetase
DNH96_RS06000	COG0737	Belongs to the 5'-nucleotidase family
DNH96_RS06005	COG1648	precorrin-2 dehydrogenase activity
DNH96_RS06005	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DNH96_RS06010	COG2146	nitrite reductase [NAD(P)H] activity
DNH96_RS06015	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DNH96_RS06020	COG1648	precorrin-2 dehydrogenase activity
DNH96_RS06020	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DNH96_RS06030	COG0454	-acetyltransferase
DNH96_RS06035	COG2116	formate transmembrane transporter activity
DNH96_RS06040	COG0471	metal ion transport
DNH96_RS06090	COG1760	l-serine dehydratase
DNH96_RS06095	COG1760	l-serine dehydratase
DNH96_RS06105	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNH96_RS06110	COG0601	transmembrane transport
DNH96_RS06115	COG4608	Belongs to the ABC transporter superfamily
DNH96_RS06120	COG0444	Belongs to the ABC transporter superfamily
DNH96_RS06125	COG4166	transmembrane transport
DNH96_RS06130	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNH96_RS06135	COG0601	transmembrane transport
DNH96_RS06140	COG4608	Belongs to the ABC transporter superfamily
DNH96_RS06145	COG0444	Belongs to the ABC transporter superfamily
DNH96_RS06150	COG4166	transmembrane transport
DNH96_RS06155	COG0702	epimerase
DNH96_RS06160	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNH96_RS06180	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
DNH96_RS06190	COG1929	Belongs to the glycerate kinase type-1 family
DNH96_RS06195	COG3764	Sortase (surface protein transpeptidase)
DNH96_RS06200	COG2271	Major facilitator Superfamily
DNH96_RS06205	COG2814	Major facilitator Superfamily
DNH96_RS06210	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
DNH96_RS06215	COG1115	amino acid carrier protein
DNH96_RS06220	COG3871	stress protein (general stress protein 26)
DNH96_RS06225	COG0789	Transcriptional regulator
DNH96_RS06230	COG1132	(ABC) transporter
DNH96_RS06235	COG1132	(ABC) transporter
DNH96_RS06245	COG0277	FAD linked oxidase domain protein
DNH96_RS06265	COG0159	tryptophan synthase activity
DNH96_RS06270	COG0133	tryptophan synthase activity
DNH96_RS06280	COG0134	indole-3-glycerol-phosphate synthase activity
DNH96_RS06290	COG0512	Glutamine amidotransferase of anthranilate synthase
DNH96_RS06295	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DNH96_RS06300	COG3961	Belongs to the TPP enzyme family
DNH96_RS06305	COG2855	membrane
DNH96_RS06310	COG3835	regulator
DNH96_RS06325	COG1028	Short-chain dehydrogenase reductase Sdr
DNH96_RS06365	COG2357	RelA SpoT domain protein
DNH96_RS06370	COG0778	Nitroreductase
DNH96_RS06375	COG1846	Transcriptional regulator
DNH96_RS06390	COG1346	cytolysis
DNH96_RS06400	COG0583	DNA-binding transcription factor activity
DNH96_RS06425	COG1141	Ferredoxin
DNH96_RS06435	COG0523	cobalamin synthesis protein
DNH96_RS06440	COG0717	Belongs to the dCTP deaminase family
DNH96_RS06445	COG0804	urea catabolic process
DNH96_RS06450	COG0832	Belongs to the urease beta subunit family
DNH96_RS06460	COG4413	Urea transporter
DNH96_RS06470	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
DNH96_RS06480	COG0577	efflux transmembrane transporter activity
DNH96_RS06485	COG1136	(ABC) transporter
DNH96_RS06510	COG3001	Fructosamine kinase
DNH96_RS06515	COG0778	Nitroreductase
DNH96_RS06530	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DNH96_RS06530	COG0463	Glycosyl transferase, family 2
DNH96_RS06555	COG0747	negative chemotaxis
DNH96_RS06560	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DNH96_RS06565	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DNH96_RS06575	COG3942	CHAP domain
DNH96_RS06575	COG1705	Flagellar rod assembly protein muramidase FlgJ
DNH96_RS06585	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNH96_RS06585	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNH96_RS06585	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNH96_RS06590	COG0789	Transcriptional regulator
DNH96_RS06595	COG0596	Alpha beta hydrolase
DNH96_RS06610	COG1012	belongs to the aldehyde dehydrogenase family
DNH96_RS06615	COG2824	Alkylphosphonate utilization operon protein PhnA
DNH96_RS06620	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DNH96_RS06625	COG1461	Dihydroxyacetone kinase
DNH96_RS06630	COG2376	Dihydroxyacetone kinase
DNH96_RS06665	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
DNH96_RS06670	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DNH96_RS06675	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DNH96_RS06680	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNH96_RS06695	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DNH96_RS06700	COG0107	imidazoleglycerol-phosphate synthase activity
DNH96_RS06715	COG0156	8-amino-7-oxononanoate synthase activity
DNH96_RS06725	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DNH96_RS06730	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
DNH96_RS06735	COG1012	belongs to the aldehyde dehydrogenase family
DNH96_RS06740	COG1510	regulation of RNA biosynthetic process
DNH96_RS06765	COG1785	Belongs to the alkaline phosphatase family
DNH96_RS06780	COG1396	sequence-specific DNA binding
DNH96_RS06785	COG2807	transmembrane transport
DNH96_RS06790	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DNH96_RS06795	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DNH96_RS06810	COG1957	nucleoside hydrolase
DNH96_RS06815	COG3250	beta-galactosidase activity
DNH96_RS06820	COG2211	Major facilitator Superfamily
DNH96_RS06825	COG0477	Major facilitator Superfamily
DNH96_RS06830	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DNH96_RS06835	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DNH96_RS06845	COG2972	Histidine kinase
DNH96_RS06850	COG2207	Transcriptional regulator
DNH96_RS06850	COG4753	response regulator
DNH96_RS06875	COG3443	Belongs to the bacterial solute-binding protein 9 family
DNH96_RS06875	COG0803	Belongs to the bacterial solute-binding protein 9 family
DNH96_RS06885	COG1942	4-Oxalocrotonate Tautomerase
DNH96_RS06890	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNH96_RS06910	COG1328	CTP reductase activity
DNH96_RS06920	COG3037	sugar-specific permease SgaT UlaA
DNH96_RS06930	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNH96_RS06935	COG3711	transcriptional antiterminator
DNH96_RS06960	COG1869	D-ribose catabolic process
DNH96_RS06965	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNH96_RS06970	COG1609	Transcriptional regulator
DNH96_RS07000	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNH96_RS07010	COG2814	Major facilitator Superfamily
DNH96_RS07020	COG0318	PFAM AMP-dependent synthetase and ligase
DNH96_RS07025	COG1960	acyl-CoA dehydrogenase activity
DNH96_RS07035	COG0183	Belongs to the thiolase family
DNH96_RS07040	COG0438	transferase activity, transferring glycosyl groups
DNH96_RS07060	COG1073	alpha beta
DNH96_RS07110	COG0579	oxidoreductase
DNH96_RS07135	COG1755	Isoprenylcysteine carboxyl methyltransferase
DNH96_RS07150	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNH96_RS07160	COG1136	(ABC) transporter
DNH96_RS07185	COG0436	Aminotransferase
DNH96_RS07195	COG0783	Belongs to the Dps family
DNH96_RS07205	COG0753	catalase activity
DNH96_RS07210	COG2318	DinB family
DNH96_RS07225	COG0076	glutamate decarboxylase activity
DNH96_RS07240	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNH96_RS07285	COG0156	8-amino-7-oxononanoate synthase activity
DNH96_RS07290	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNH96_RS07295	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DNH96_RS07300	COG1620	l-lactate permease
DNH96_RS07335	COG3314	Sporulation integral membrane protein YlbJ
DNH96_RS07355	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DNH96_RS07365	COG3716	PTS system mannose fructose sorbose family IID component
DNH96_RS07370	COG3715	PTS system
DNH96_RS07375	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNH96_RS07375	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNH96_RS07390	COG1105	Belongs to the carbohydrate kinase PfkB family
DNH96_RS07395	COG2222	sugar isomerase
DNH96_RS07400	COG2188	Transcriptional regulator
DNH96_RS07405	COG0366	Alpha amylase catalytic
DNH96_RS07415	COG1131	(ABC) transporter
DNH96_RS07445	COG0346	lactoylglutathione lyase activity
DNH96_RS07455	COG0490	domain, Protein
DNH96_RS07460	COG0475	glutathione-regulated potassium exporter activity
DNH96_RS07465	COG3842	ATPase activity
DNH96_RS07475	COG1175	transmembrane transport
DNH96_RS07480	COG3833	ABC-type maltose transport systems, permease component
DNH96_RS07490	COG0366	Alpha amylase catalytic
DNH96_RS07500	COG0673	inositol 2-dehydrogenase activity
DNH96_RS07510	COG1609	Transcriptional regulator
DNH96_RS07535	COG0431	NADPH-dependent FMN reductase
DNH96_RS07555	COG1131	(ABC) transporter
DNH96_RS07560	COG0842	Transport permease protein
DNH96_RS07565	COG4585	Histidine kinase
DNH96_RS07565	COG2203	Gaf domain
DNH96_RS07570	COG2197	response regulator
DNH96_RS07585	COG2235	arginine
DNH96_RS07605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DNH96_RS07610	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DNH96_RS07620	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNH96_RS07625	COG3177	Filamentation induced by cAMP protein fic
DNH96_RS07630	COG3655	Transcriptional regulator
DNH96_RS07640	COG2130	NADP-dependent
DNH96_RS07645	COG0702	epimerase
DNH96_RS07660	COG0415	Belongs to the DNA photolyase family
DNH96_RS07670	COG2723	6-phospho-beta-galactosidase activity
DNH96_RS07675	COG2188	Transcriptional regulator
DNH96_RS07705	COG2217	Heavy metal translocating P-type atpase
DNH96_RS07710	COG0531	amino acid
DNH96_RS07755	COG2801	Transposase and inactivated derivatives
DNH96_RS07765	COG1388	LysM domain
DNH96_RS07770	COG2217	Heavy metal translocating P-type atpase
DNH96_RS07780	COG0584	glycerophosphoryl diester phosphodiesterase
DNH96_RS07785	COG2030	dehydratase
DNH96_RS07810	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNH96_RS07815	COG0640	Transcriptional regulator
DNH96_RS07825	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DNH96_RS07830	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DNH96_RS07840	COG4863	YycH protein
DNH96_RS07845	COG5002	protein histidine kinase activity
DNH96_RS07850	COG0745	RESPONSE REGULATOR receiver
DNH96_RS07870	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNH96_RS07875	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DNH96_RS07880	COG0305	Participates in initiation and elongation during chromosome replication
DNH96_RS07885	COG0359	binds to the 23S rRNA
DNH96_RS07890	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DNH96_RS07895	COG4241	membrane
DNH96_RS07900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DNH96_RS07910	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DNH96_RS07920	COG2986	histidine ammonia-lyase
DNH96_RS07925	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DNH96_RS07935	COG0187	DNA topoisomerase II activity
DNH96_RS07940	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DNH96_RS07945	COG2501	S4 domain
DNH96_RS07950	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DNH96_RS07950	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DNH96_RS07960	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DNH96_RS07970	COG0594	ribonuclease P activity
DNH96_RS07975	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DNH96_RS07980	COG0445	tRNA wobble uridine modification
DNH96_RS07985	COG0357	Ribosomal RNA small subunit methyltransferase G
DNH96_RS08010	COG0400	carboxylic ester hydrolase activity
DNH96_RS08015	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DNH96_RS08020	COG0346	lactoylglutathione lyase activity
DNH96_RS08025	COG1846	Transcriptional regulator
DNH96_RS08030	COG2388	GCN5-related N-acetyl-transferase
DNH96_RS08040	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
DNH96_RS08045	COG0830	nickel cation binding
DNH96_RS08055	COG0829	nickel cation binding
DNH96_RS08065	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DNH96_RS08065	COG0646	methionine synthase
DNH96_RS08070	COG0626	cystathionine gamma-synthase activity
DNH96_RS08075	COG0626	cystathionine gamma-synthase activity
DNH96_RS08080	COG1475	DNA binding
DNH96_RS08085	COG0668	transmembrane transport
DNH96_RS08090	COG4481	Protein conserved in bacteria
DNH96_RS08095	COG0012	GTP binding
DNH96_RS08130	COG1131	(ABC) transporter
DNH96_RS08135	COG1668	transmembrane transport
DNH96_RS08145	COG0360	Binds together with S18 to 16S ribosomal RNA
DNH96_RS08155	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DNH96_RS08160	COG0662	Cupin 2, conserved barrel domain protein
DNH96_RS08160	COG2207	Transcriptional regulator
DNH96_RS08170	COG1175	transmembrane transport
DNH96_RS08175	COG0395	ABC-type sugar transport system, permease component
DNH96_RS08180	COG0673	inositol 2-dehydrogenase activity
DNH96_RS08185	COG3842	ATPase activity
DNH96_RS08190	COG0753	catalase activity
DNH96_RS08195	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DNH96_RS08200	COG1464	Belongs to the NlpA lipoprotein family
DNH96_RS08205	COG2011	ABC-type metal ion transport system permease component
DNH96_RS08210	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNH96_RS08220	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DNH96_RS08235	COG0450	alkyl hydroperoxide reductase
DNH96_RS08240	COG0778	Nitroreductase
DNH96_RS08260	COG0577	efflux transmembrane transporter activity
DNH96_RS08260	COG1136	(ABC) transporter
DNH96_RS08265	COG1823	symporter activity
DNH96_RS08270	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNH96_RS08275	COG5183	chlorophyll binding
DNH96_RS08290	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNH96_RS08295	COG2233	PERMEase
DNH96_RS08300	COG0516	GMP reductase activity
DNH96_RS08300	COG0517	IMP dehydrogenase activity
DNH96_RS08305	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DNH96_RS08305	COG0519	Catalyzes the synthesis of GMP from XMP
DNH96_RS08315	COG1525	nuclease
DNH96_RS08335	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DNH96_RS08360	COG0747	negative chemotaxis
DNH96_RS08365	COG0601	transmembrane transport
DNH96_RS08370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNH96_RS08375	COG0444	Belongs to the ABC transporter superfamily
DNH96_RS08380	COG1124	(ABC) transporter
DNH96_RS08405	COG3682	Transcriptional regulator
DNH96_RS08425	COG2814	Major facilitator Superfamily
DNH96_RS08430	COG0730	response to heat
DNH96_RS08435	COG1937	Protein conserved in bacteria
DNH96_RS08440	COG2210	Belongs to the sulfur carrier protein TusA family
DNH96_RS08460	COG1263	PTS System
DNH96_RS08460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNH96_RS08465	COG1486	melibiose metabolic process
DNH96_RS08475	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
DNH96_RS08505	COG0574	Belongs to the PEP-utilizing enzyme family
DNH96_RS08505	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNH96_RS08510	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
DNH96_RS08525	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DNH96_RS08530	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DNH96_RS08540	COG2205	protein histidine kinase activity
DNH96_RS08545	COG0745	RESPONSE REGULATOR receiver
DNH96_RS08555	COG0733	neurotransmitter:sodium symporter activity
DNH96_RS08560	COG2272	Belongs to the type-B carboxylesterase lipase family
DNH96_RS08565	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNH96_RS08570	COG0626	cystathionine gamma-synthase activity
DNH96_RS08595	COG1192	Involved in chromosome partitioning
DNH96_RS08615	COG2226	methyltransferase
DNH96_RS08625	COG0456	acetyltransferase
DNH96_RS08635	COG2378	regulation of single-species biofilm formation
DNH96_RS08640	COG1192	Involved in chromosome partitioning
DNH96_RS08725	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DNH96_RS08745	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNH96_RS08760	COG0583	DNA-binding transcription factor activity
DNH96_RS08765	COG0069	glutamate synthase activity
DNH96_RS08765	COG0070	glutamate synthase
DNH96_RS08765	COG0067	glutamate synthase
DNH96_RS08770	COG0493	'glutamate synthase
DNH96_RS08780	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNH96_RS08780	COG1263	PTS System
DNH96_RS08785	COG0366	Alpha amylase catalytic
DNH96_RS08790	COG2188	Transcriptional regulator
DNH96_RS08800	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DNH96_RS08805	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNH96_RS08810	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DNH96_RS08815	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DNH96_RS08840	COG1982	Orn Lys Arg decarboxylase major
DNH96_RS08845	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DNH96_RS08850	COG3870	Protein conserved in bacteria
DNH96_RS08855	COG0470	DNA polymerase III
DNH96_RS08860	COG1774	PSP1 C-terminal conserved region
DNH96_RS08865	COG4467	Involved in initiation control of chromosome replication
DNH96_RS08870	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DNH96_RS08875	COG2827	Endonuclease containing a URI domain
DNH96_RS08880	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DNH96_RS08890	COG0084	hydrolase, TatD family'
DNH96_RS08895	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNH96_RS08905	COG4466	Protein conserved in bacteria
DNH96_RS08910	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DNH96_RS08915	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNH96_RS08920	COG0251	oxidation-reduction process
DNH96_RS08925	COG2088	sporulation resulting in formation of a cellular spore
DNH96_RS08930	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DNH96_RS08935	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNH96_RS08945	COG0193	aminoacyl-tRNA hydrolase activity
DNH96_RS08950	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DNH96_RS08955	COG2244	polysaccharide biosynthetic process
DNH96_RS08960	COG3956	TIGRFAM MazG family protein
DNH96_RS08965	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DNH96_RS08975	COG1098	S1 RNA binding domain
DNH96_RS08990	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DNH96_RS08995	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DNH96_RS09005	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DNH96_RS09015	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DNH96_RS09020	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNH96_RS09095	COG1289	transmembrane transporter activity
DNH96_RS09100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNH96_RS09105	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DNH96_RS09110	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DNH96_RS09120	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNH96_RS09130	COG3880	PFAM UvrB UvrC protein
DNH96_RS09135	COG3869	Catalyzes the specific phosphorylation of arginine residues in
DNH96_RS09140	COG0542	response to heat
DNH96_RS09175	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DNH96_RS09180	COG4956	integral membrane protein (PIN domain superfamily)
DNH96_RS09185	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DNH96_RS09195	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DNH96_RS09200	COG1045	serine acetyltransferase
DNH96_RS09205	COG0215	cysteine-tRNA ligase activity
DNH96_RS09210	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DNH96_RS09230	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DNH96_RS09235	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DNH96_RS09240	COG0250	Participates in transcription elongation, termination and antitermination
DNH96_RS09245	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DNH96_RS09250	COG0081	regulation of translation
DNH96_RS09255	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DNH96_RS09265	COG2813	Specifically methylates the guanine in position
DNH96_RS09270	COG0085	RNA polymerase activity
DNH96_RS09275	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNH96_RS09285	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DNH96_RS09290	COG0049	tRNA binding
DNH96_RS09295	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DNH96_RS09300	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DNH96_RS09305	COG3527	Alpha-acetolactate decarboxylase
DNH96_RS09310	COG1473	amidohydrolase
DNH96_RS09320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNH96_RS09350	COG0546	phosphoglycolate phosphatase activity
DNH96_RS09355	COG1428	Deoxynucleoside kinase
DNH96_RS09360	COG1428	Deoxynucleoside kinase
DNH96_RS09370	COG0561	phosphatase activity
DNH96_RS09385	COG1136	(ABC) transporter
DNH96_RS09385	COG0577	efflux transmembrane transporter activity
DNH96_RS09390	COG1469	GTP cyclohydrolase I activity
DNH96_RS09395	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNH96_RS09410	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNH96_RS09410	COG2190	(PTS) system
DNH96_RS09410	COG1263	PTS System
DNH96_RS09425	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DNH96_RS09435	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DNH96_RS09490	COG0791	NLP P60 protein
DNH96_RS09490	COG0741	lytic transglycosylase activity
DNH96_RS09520	COG2946	Replication initiation factor
DNH96_RS09530	COG1674	ftsk spoiiie
DNH96_RS09545	COG2814	Major facilitator Superfamily
DNH96_RS09555	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNH96_RS09565	COG0488	(ABC) transporter
DNH96_RS09570	COG0588	phosphoglycerate mutase activity
DNH96_RS09575	COG0318	PFAM AMP-dependent synthetase and ligase
DNH96_RS09580	COG0183	Belongs to the thiolase family
DNH96_RS09610	COG2363	Small membrane protein
DNH96_RS09645	COG2311	Membrane
DNH96_RS09655	COG1566	PFAM secretion protein HlyD family protein
DNH96_RS09660	COG2814	Major facilitator Superfamily
DNH96_RS09670	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNH96_RS09675	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNH96_RS09680	COG0095	Lipoate-protein ligase
DNH96_RS09685	COG0280	phosphate acetyltransferase
DNH96_RS09710	COG0471	metal ion transport
DNH96_RS09770	COG4844	belongs to the
DNH96_RS09780	COG1078	dGTPase activity
DNH96_RS09795	COG0018	arginyl-trna synthetase
DNH96_RS09805	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DNH96_RS09810	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNH96_RS09815	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS09820	COG0546	phosphoglycolate phosphatase activity
DNH96_RS09875	COG2111	Na H antiporter
DNH96_RS09880	COG1006	Multisubunit Na H antiporter MnhC subunit
DNH96_RS09890	COG1863	multisubunit Na H antiporter MnhE subunit
DNH96_RS09895	COG2212	antiporter activity
DNH96_RS09900	COG1320	monovalent cation:proton antiporter activity
DNH96_RS09905	COG0803	Belongs to the bacterial solute-binding protein 9 family
DNH96_RS09910	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DNH96_RS09915	COG1121	(ABC) transporter
DNH96_RS09925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS09930	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS09935	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNH96_RS09945	COG2423	ornithine cyclodeaminase activity
DNH96_RS09950	COG4264	IucA IucC family
DNH96_RS09955	COG2814	Major facilitator Superfamily
DNH96_RS09960	COG4264	IucA IucC family
DNH96_RS09965	COG4264	IucA IucC family
DNH96_RS09975	COG0019	diaminopimelate decarboxylase activity
DNH96_RS09980	COG1475	DNA binding
DNH96_RS09990	COG0110	maltose O-acetyltransferase activity
DNH96_RS09995	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DNH96_RS10005	COG1682	transport, permease protein
DNH96_RS10010	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DNH96_RS10015	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DNH96_RS10035	COG1686	Belongs to the peptidase S11 family
DNH96_RS10065	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNH96_RS10070	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNH96_RS10075	COG1120	ATPase activity
DNH96_RS10080	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS10085	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNH96_RS10095	COG0477	Major facilitator Superfamily
DNH96_RS10100	COG3949	Membrane
DNH96_RS10110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNH96_RS10115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNH96_RS10120	COG0745	RESPONSE REGULATOR receiver
DNH96_RS10130	COG1136	(ABC) transporter
DNH96_RS10135	COG0577	efflux transmembrane transporter activity
DNH96_RS10140	COG1392	Phosphate transport regulator
DNH96_RS10145	COG0306	phosphate transporter
DNH96_RS10150	COG3942	CHAP domain
DNH96_RS10150	COG1388	LysM domain
DNH96_RS10160	COG0352	thiamine-phosphate diphosphorylase activity
DNH96_RS10170	COG2022	thiamine diphosphate biosynthetic process
DNH96_RS10175	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DNH96_RS10180	COG0217	transcriptional regulatory protein
DNH96_RS10195	COG0583	DNA-binding transcription factor activity
DNH96_RS10200	COG2814	Major facilitator Superfamily
DNH96_RS10205	COG2839	Protein conserved in bacteria
DNH96_RS10235	COG1611	Belongs to the LOG family
DNH96_RS10240	COG1671	Belongs to the UPF0178 family
DNH96_RS10250	COG1968	undecaprenyl-diphosphatase activity
DNH96_RS10255	COG4988	ABC transporter
DNH96_RS10260	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DNH96_RS10270	COG0523	cobalamin synthesis protein
DNH96_RS10275	COG4989	oxidoreductase activity
DNH96_RS10295	COG0039	L-malate dehydrogenase activity
DNH96_RS10315	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DNH96_RS10320	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DNH96_RS10335	COG1349	DNA-binding transcription factor activity
DNH96_RS10340	COG1105	Belongs to the carbohydrate kinase PfkB family
DNH96_RS10345	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNH96_RS10345	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNH96_RS10345	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNH96_RS10350	COG1253	flavin adenine dinucleotide binding
DNH96_RS10355	COG0463	Glycosyl transferase, family 2
DNH96_RS10370	COG0602	queuosine metabolic process
DNH96_RS10375	COG0720	synthase
DNH96_RS10385	COG0512	Glutamine amidotransferase of anthranilate synthase
DNH96_RS10405	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DNH96_RS10415	COG1368	sulfuric ester hydrolase activity
DNH96_RS10430	COG0488	(ABC) transporter
DNH96_RS10435	COG0514	ATP-dependent DNA helicase (RecQ)
DNH96_RS10440	COG0517	IMP dehydrogenase activity
DNH96_RS10440	COG1125	glycine betaine transport
DNH96_RS10445	COG1174	glycine betaine transport
DNH96_RS10450	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNH96_RS10465	COG3104	oligopeptide transport
DNH96_RS10470	COG3104	oligopeptide transport
DNH96_RS10485	COG2801	Transposase and inactivated derivatives
DNH96_RS10530	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNH96_RS10535	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNH96_RS10545	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DNH96_RS10560	COG3118	belongs to the thioredoxin family
DNH96_RS10565	COG1929	Belongs to the glycerate kinase type-1 family
DNH96_RS10570	COG2195	Cleaves the N-terminal amino acid of tripeptides
DNH96_RS10590	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DNH96_RS10595	COG1739	Uncharacterized protein family UPF0029
DNH96_RS10605	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DNH96_RS10620	COG0653	protein targeting
DNH96_RS10655	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DNH96_RS10660	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DNH96_RS10665	COG0110	maltose O-acetyltransferase activity
DNH96_RS10680	COG1660	Displays ATPase and GTPase activities
DNH96_RS10685	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DNH96_RS10690	COG1481	regulation of sporulation
DNH96_RS10700	COG0740	serine-type endopeptidase activity
DNH96_RS10710	COG1090	epimerase
DNH96_RS10735	COG0126	phosphoglycerate kinase activity
DNH96_RS10740	COG0149	triose-phosphate isomerase activity
DNH96_RS10745	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNH96_RS10750	COG0148	phosphopyruvate hydratase activity
DNH96_RS10775	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DNH96_RS10780	COG1647	Serine aminopeptidase, S33
DNH96_RS10785	COG0557	exoribonuclease II activity
DNH96_RS10815	COG0346	lactoylglutathione lyase activity
DNH96_RS10835	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNH96_RS10850	COG1764	response to oxidative stress
DNH96_RS10860	COG0710	3-dehydroquinate dehydratase activity
DNH96_RS10870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNH96_RS10875	COG1393	Belongs to the ArsC family
DNH96_RS10885	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNH96_RS10890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNH96_RS10900	COG2011	ABC-type metal ion transport system permease component
DNH96_RS10905	COG1464	Belongs to the NlpA lipoprotein family
DNH96_RS10910	COG1464	Belongs to the NlpA lipoprotein family
DNH96_RS10920	COG0396	ATPase activity
DNH96_RS10925	COG0719	Fe-S assembly protein
DNH96_RS10935	COG0822	iron-sulfur transferase activity
DNH96_RS10940	COG0719	Fe-S assembly protein
DNH96_RS10960	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DNH96_RS10980	COG3617	BRO family, N-terminal domain
DNH96_RS11035	COG1484	DNA-dependent DNA replication
DNH96_RS11145	COG3728	DNA packaging
DNH96_RS11145	COG5484	DNA packaging
DNH96_RS11150	COG1783	phage Terminase large subunit
DNH96_RS11265	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNH96_RS11265	COG1388	LysM domain
DNH96_RS11295	COG1253	flavin adenine dinucleotide binding
DNH96_RS11310	COG1801	Protein of unknown function DUF72
DNH96_RS11315	COG0730	response to heat
DNH96_RS11320	COG0737	Belongs to the 5'-nucleotidase family
DNH96_RS11325	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DNH96_RS11330	COG4470	Protein conserved in bacteria
DNH96_RS11340	COG2445	Protein of unknown function DUF86
DNH96_RS11345	COG0647	UMP catabolic process
DNH96_RS11350	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNH96_RS11355	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DNH96_RS11360	COG4837	Protein of unknown function (DUF1462)
DNH96_RS11365	COG1252	NADH dehydrogenase
DNH96_RS11370	COG4844	belongs to the
DNH96_RS11375	COG0316	Belongs to the HesB IscA family
DNH96_RS11380	COG1252	NADH dehydrogenase
DNH96_RS11385	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DNH96_RS11390	COG2056	Na+-H+ antiporter family
DNH96_RS11400	COG1320	monovalent cation:proton antiporter activity
DNH96_RS11405	COG2212	antiporter activity
DNH96_RS11410	COG1863	multisubunit Na H antiporter MnhE subunit
DNH96_RS11415	COG0651	ATP synthesis coupled electron transport
DNH96_RS11420	COG1006	Multisubunit Na H antiporter MnhC subunit
DNH96_RS11425	COG2111	Na H antiporter
DNH96_RS11430	COG2111	Na H antiporter
DNH96_RS11430	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DNH96_RS11440	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DNH96_RS11460	COG1278	Cold shock
DNH96_RS11470	COG1098	S1 RNA binding domain
DNH96_RS11475	COG1012	belongs to the aldehyde dehydrogenase family
DNH96_RS11490	COG0584	glycerophosphoryl diester phosphodiesterase
DNH96_RS11500	COG0137	argininosuccinate synthase activity
DNH96_RS11505	COG0166	Belongs to the GPI family
DNH96_RS11520	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DNH96_RS11530	COG0179	Fumarylacetoacetate (FAA) hydrolase
DNH96_RS11540	COG0446	pyridine nucleotide-disulphide oxidoreductase
DNH96_RS11545	COG0561	phosphatase activity
DNH96_RS11565	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DNH96_RS11590	COG0601	transmembrane transport
DNH96_RS11595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNH96_RS11600	COG0444	Belongs to the ABC transporter superfamily
DNH96_RS11605	COG4608	Belongs to the ABC transporter superfamily
DNH96_RS11610	COG4166	transmembrane transport
DNH96_RS11615	COG0180	Tryptophanyl-tRNA synthetase
DNH96_RS11620	COG1393	Belongs to the ArsC family
DNH96_RS11630	COG3591	Belongs to the peptidase S1B family
DNH96_RS11645	COG1164	Oligoendopeptidase f
DNH96_RS11655	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DNH96_RS11660	COG2346	COG2346, Truncated hemoglobins
DNH96_RS11675	COG2357	RelA SpoT domain protein
DNH96_RS11685	COG0564	pseudouridine synthase activity
DNH96_RS11690	COG2239	Acts as a magnesium transporter
DNH96_RS11695	COG0475	glutathione-regulated potassium exporter activity
DNH96_RS11695	COG0569	domain protein
DNH96_RS11705	COG0673	inositol 2-dehydrogenase activity
DNH96_RS11710	COG2211	Major facilitator Superfamily
DNH96_RS11715	COG4409	exo-alpha-(2->6)-sialidase activity
DNH96_RS11720	COG0628	permease
DNH96_RS11725	COG1115	amino acid carrier protein
DNH96_RS11730	COG2382	esterase
DNH96_RS11735	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DNH96_RS11740	COG3716	PTS system mannose fructose sorbose family IID component
DNH96_RS11745	COG3715	PTS system
DNH96_RS11755	COG2814	Major facilitator Superfamily
DNH96_RS11760	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNH96_RS11765	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNH96_RS11775	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DNH96_RS11780	COG0861	Integral membrane protein TerC family
DNH96_RS11785	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNH96_RS11790	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNH96_RS11795	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNH96_RS11805	COG1696	Membrane protein involved in D-alanine export
DNH96_RS11820	COG0737	Belongs to the 5'-nucleotidase family
DNH96_RS11825	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
DNH96_RS11825	COG4932	domain protein
DNH96_RS11825	COG3266	domain, Protein
DNH96_RS11855	COG4873	Protein conserved in bacteria
DNH96_RS11875	COG4619	ABC transporter
DNH96_RS11880	COG0390	transport system, permease component
DNH96_RS11885	COG1575	Belongs to the MenA family. Type 1 subfamily
DNH96_RS11890	COG1169	isochorismate synthase
DNH96_RS11895	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DNH96_RS11905	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DNH96_RS11910	COG0436	Aminotransferase
DNH96_RS11915	COG3594	Acyltransferase
DNH96_RS11940	COG1316	TRANSCRIPTIONal
DNH96_RS11945	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNH96_RS11950	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DNH96_RS11960	COG1215	transferase activity, transferring glycosyl groups
DNH96_RS11970	COG1682	transport, permease protein
DNH96_RS11980	COG1134	teichoic acid transport
DNH96_RS11995	COG3212	peptidase
DNH96_RS12035	COG3973	AAA domain
DNH96_RS12045	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DNH96_RS12050	COG1845	cytochrome c oxidase, subunit III
DNH96_RS12060	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DNH96_RS12070	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DNH96_RS12070	COG1017	nitric oxide dioxygenase activity
DNH96_RS12075	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DNH96_RS12080	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DNH96_RS12085	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DNH96_RS12090	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DNH96_RS12095	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNH96_RS12100	COG0047	phosphoribosylformylglycinamidine synthase activity
DNH96_RS12110	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DNH96_RS12115	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DNH96_RS12125	COG0138	bifunctional purine biosynthesis protein purh
DNH96_RS12130	COG0151	Belongs to the GarS family
DNH96_RS12140	COG4172	Belongs to the ABC transporter superfamily
DNH96_RS12155	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DNH96_RS12165	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNH96_RS12170	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNH96_RS12180	COG1393	Belongs to the ArsC family
DNH96_RS12185	COG1271	oxidase subunit
DNH96_RS12190	COG1294	oxidase, subunit
DNH96_RS12195	COG0569	domain protein
DNH96_RS12220	COG0492	ferredoxin-NADP+ reductase activity
DNH96_RS12230	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNH96_RS12235	COG5503	Protein of unknown function (DUF1447)
DNH96_RS12280	COG4476	Belongs to the UPF0223 family
DNH96_RS12290	COG3842	ATPase activity
DNH96_RS12300	COG1177	transmembrane transport
DNH96_RS12305	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DNH96_RS12320	COG4493	Belongs to the UPF0637 family
DNH96_RS12325	COG0483	inositol monophosphate 1-phosphatase activity
DNH96_RS12335	COG1217	gtp-binding protein TYPA
DNH96_RS12340	COG1902	pentaerythritol trinitrate reductase activity
DNH96_RS12345	COG4896	Protein conserved in bacteria
DNH96_RS12350	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DNH96_RS12355	COG4838	Belongs to the UPF0358 family
DNH96_RS12360	COG0772	Belongs to the SEDS family
DNH96_RS12385	COG0109	protoheme IX farnesyltransferase activity
DNH96_RS12400	COG3679	Belongs to the UPF0342 family
DNH96_RS12405	COG0584	glycerophosphoryl diester phosphodiesterase
DNH96_RS12410	COG4471	UPF0298 protein
DNH96_RS12420	COG0742	ribosomal rna small subunit methyltransferase
DNH96_RS12440	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DNH96_RS12445	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNH96_RS12450	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DNH96_RS12465	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNH96_RS12480	COG1796	DNA polymerase
DNH96_RS12480	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DNH96_RS12485	COG1193	negative regulation of DNA recombination
DNH96_RS12490	COG3118	belongs to the thioredoxin family
DNH96_RS12495	COG0322	excinuclease ABC activity
DNH96_RS12500	COG2009	succinate dehydrogenase
DNH96_RS12505	COG1053	succinate dehydrogenase
DNH96_RS12510	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DNH96_RS12515	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DNH96_RS12575	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNH96_RS12590	COG1011	Hydrolase
DNH96_RS12595	COG0454	-acetyltransferase
DNH96_RS12600	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
DNH96_RS12605	COG2001	Belongs to the MraZ family
DNH96_RS12610	COG0275	rRNA processing
DNH96_RS12615	COG4839	cell division protein FtsL
DNH96_RS12620	COG0768	penicillin binding
DNH96_RS12630	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DNH96_RS12640	COG0849	cell division
DNH96_RS12645	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DNH96_RS12655	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DNH96_RS12660	COG1799	cell septum assembly
DNH96_RS12665	COG0762	integral membrane protein
DNH96_RS12670	COG1869	D-ribose catabolic process
DNH96_RS12675	COG4975	Glucose uptake
DNH96_RS12685	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNH96_RS12690	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNH96_RS12700	COG4409	exo-alpha-(2->6)-sialidase activity
DNH96_RS12705	COG0673	inositol 2-dehydrogenase activity
DNH96_RS12715	COG3599	regulation of cell shape
DNH96_RS12720	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNH96_RS12725	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DNH96_RS12730	COG0564	pseudouridine synthase activity
DNH96_RS12735	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DNH96_RS12755	COG0505	Belongs to the CarA family
DNH96_RS12760	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DNH96_RS12770	COG0167	dihydroorotate dehydrogenase activity
DNH96_RS12775	COG0284	orotidine-5'-phosphate decarboxylase activity
DNH96_RS12780	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DNH96_RS12800	COG1758	RNA polymerase activity
DNH96_RS12815	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNH96_RS12820	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DNH96_RS12825	COG0242	peptide deformylase activity
DNH96_RS12830	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DNH96_RS12835	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DNH96_RS12835	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DNH96_RS12840	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DNH96_RS12855	COG2124	cytochrome p450
DNH96_RS12865	COG1162	GTPase activity
DNH96_RS12870	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DNH96_RS12885	COG1302	Protein conserved in bacteria