locus-tag class description JMB28_RS00005 PF00308 Bacterial dnaA protein JMB28_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JMB28_RS00005 PF11638 DnaA N-terminal domain JMB28_RS00010 PF02767 DNA polymerase III beta subunit, central domain JMB28_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JMB28_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JMB28_RS00020 PF02463 RecF/RecN/SMC N terminal domain JMB28_RS00025 PF00204 DNA gyrase B JMB28_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JMB28_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS00025 PF01751 Toprim domain JMB28_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JMB28_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JMB28_RS00035 PF01256 Carbohydrate kinase JMB28_RS00040 PF00221 Aromatic amino acid lyase JMB28_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMB28_RS00045 PF02403 Seryl-tRNA synthetase N-terminal domain JMB28_RS00050 PF03591 AzlC protein JMB28_RS00060 PF00561 alpha/beta hydrolase fold JMB28_RS00070 PF02272 DHHA1 domain JMB28_RS00070 PF01368 DHH family JMB28_RS00075 PF03948 Ribosomal protein L9, C-terminal domain JMB28_RS00075 PF01281 Ribosomal protein L9, N-terminal domain JMB28_RS00080 PF00772 DnaB-like helicase N terminal domain JMB28_RS00080 PF03796 DnaB-like helicase C terminal domain JMB28_RS00085 PF00709 Adenylosuccinate synthetase JMB28_RS00090 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JMB28_RS00110 PF07690 Major Facilitator Superfamily JMB28_RS00115 PF00072 Response regulator receiver domain JMB28_RS00115 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS00120 PF00672 HAMP domain JMB28_RS00120 PF00512 His Kinase A (phospho-acceptor) domain JMB28_RS00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS00120 PF14827 Double sensory domain of two-component sensor kinase JMB28_RS00120 PF13426 PAS domain JMB28_RS00145 PF00753 Metallo-beta-lactamase superfamily JMB28_RS00150 PF02590 Predicted SPOUT methyltransferase JMB28_RS00160 PF02086 D12 class N6 adenine-specific DNA methyltransferase JMB28_RS00180 PF00239 Resolvase, N terminal domain JMB28_RS00180 PF13408 Recombinase zinc beta ribbon domain JMB28_RS00180 PF07508 Recombinase JMB28_RS00220 PF17191 RecG wedge domain JMB28_RS00220 PF13749 Putative ATP-dependent DNA helicase recG C-terminal JMB28_RS00220 PF00270 DEAD/DEAH box helicase JMB28_RS00230 PF01022 Bacterial regulatory protein, arsR family JMB28_RS00235 PF01451 Low molecular weight phosphotyrosine protein phosphatase JMB28_RS00240 PF02040 Arsenical pump membrane protein JMB28_RS00245 PF01022 Bacterial regulatory protein, arsR family JMB28_RS00255 PF01022 Bacterial regulatory protein, arsR family JMB28_RS00275 PF04002 RadC-like JAB domain JMB28_RS00300 PF07563 Protein of unknown function (DUF1541) JMB28_RS00305 PF00106 short chain dehydrogenase JMB28_RS00310 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS00310 PF00668 Condensation domain JMB28_RS00310 PF00501 AMP-binding enzyme JMB28_RS00310 PF00550 Phosphopantetheine attachment site JMB28_RS00355 PF01032 FecCD transport family JMB28_RS00360 PF00005 ABC transporter JMB28_RS00365 PF07859 alpha/beta hydrolase fold JMB28_RS00380 PF00455 DeoR C terminal sensor domain JMB28_RS00380 PF08220 DeoR-like helix-turn-helix domain JMB28_RS00385 PF00005 ABC transporter JMB28_RS00385 PF08402 TOBE domain JMB28_RS00400 PF00266 Aminotransferase class-V JMB28_RS00405 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS00420 PF01979 Amidohydrolase family JMB28_RS00445 PF01047 MarR family JMB28_RS00460 PF00834 Ribulose-phosphate 3 epimerase family JMB28_RS00465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS00470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS00475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS00485 PF08279 HTH domain JMB28_RS00485 PF05043 Mga helix-turn-helix domain JMB28_RS00485 PF00874 PRD domain JMB28_RS00485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS00485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS00490 PF09339 IclR helix-turn-helix domain JMB28_RS00490 PF01614 Bacterial transcriptional regulator JMB28_RS00495 PF00294 pfkB family carbohydrate kinase JMB28_RS00510 PF02447 GntP family permease JMB28_RS00515 PF01613 Flavin reductase like domain JMB28_RS00520 PF00857 Isochorismatase family JMB28_RS00525 PF01037 Lrp/AsnC ligand binding domain JMB28_RS00530 PF01638 HxlR-like helix-turn-helix JMB28_RS00535 PF00753 Metallo-beta-lactamase superfamily JMB28_RS00540 PF13686 DsrE/DsrF/DrsH-like family JMB28_RS00545 PF02583 Metal-sensitive transcriptional repressor JMB28_RS00550 PF01925 Sulfite exporter TauE/SafE JMB28_RS00560 PF00455 DeoR C terminal sensor domain JMB28_RS00560 PF08220 DeoR-like helix-turn-helix domain JMB28_RS00565 PF00171 Aldehyde dehydrogenase family JMB28_RS00570 PF04962 KduI/IolB family JMB28_RS00575 PF00294 pfkB family carbohydrate kinase JMB28_RS00580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JMB28_RS00580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMB28_RS00580 PF00205 Thiamine pyrophosphate enzyme, central domain JMB28_RS00585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS00585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS00590 PF01261 Xylose isomerase-like TIM barrel JMB28_RS00595 PF00474 Sodium:solute symporter family JMB28_RS00600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS00600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS00605 PF01116 Fructose-bisphosphate aldolase class-II JMB28_RS00610 PF14552 Tautomerase enzyme JMB28_RS00620 PF00106 short chain dehydrogenase JMB28_RS00625 PF01610 Transposase JMB28_RS00625 PF13683 Integrase core domain JMB28_RS00635 PF00106 short chain dehydrogenase JMB28_RS00640 PF02040 Arsenical pump membrane protein JMB28_RS00650 PF08220 DeoR-like helix-turn-helix domain JMB28_RS00650 PF00455 DeoR C terminal sensor domain JMB28_RS00655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS00655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS00660 PF06134 L-rhamnose isomerase (RhaA) JMB28_RS00665 PF00596 Class II Aldolase and Adducin N-terminal domain JMB28_RS00670 PF05336 L-rhamnose mutarotase JMB28_RS00675 PF07690 Major Facilitator Superfamily JMB28_RS00680 PF00171 Aldehyde dehydrogenase family JMB28_RS00700 PF00474 Sodium:solute symporter family JMB28_RS00710 PF01638 HxlR-like helix-turn-helix JMB28_RS00715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMB28_RS00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS00720 PF03466 LysR substrate binding domain JMB28_RS00730 PF02146 Sir2 family JMB28_RS00745 PF10100 Staphylopine dehydrogenase JMB28_RS00750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMB28_RS00755 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS00760 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS00760 PF12911 N-terminal TM domain of oligopeptide transport permease C JMB28_RS00765 PF00005 ABC transporter JMB28_RS00770 PF00005 ABC transporter JMB28_RS00775 PF07690 Major Facilitator Superfamily JMB28_RS00805 PF11066 Protein of unknown function (DUF2867) JMB28_RS00805 PF13460 NAD(P)H-binding JMB28_RS00810 PF03073 TspO/MBR family JMB28_RS00820 PF01593 Flavin containing amine oxidoreductase JMB28_RS00825 PF00535 Glycosyl transferase family 2 JMB28_RS00835 PF01593 Flavin containing amine oxidoreductase JMB28_RS00840 PF16242 Pyridoxamine 5'-phosphate oxidase like JMB28_RS00845 PF00875 DNA photolyase JMB28_RS00845 PF03441 FAD binding domain of DNA photolyase JMB28_RS00865 PF03601 Conserved hypothetical protein 698 JMB28_RS00870 PF03466 LysR substrate binding domain JMB28_RS00870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS00875 PF12833 Helix-turn-helix domain JMB28_RS00875 PF02311 AraC-like ligand binding domain JMB28_RS00885 PF02837 Glycosyl hydrolases family 2, sugar binding domain JMB28_RS00885 PF00703 Glycosyl hydrolases family 2 JMB28_RS00885 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JMB28_RS00885 PF02929 Beta galactosidase small chain JMB28_RS00895 PF00005 ABC transporter JMB28_RS00905 PF01381 Helix-turn-helix JMB28_RS00910 PF07690 Major Facilitator Superfamily JMB28_RS00915 PF07690 Major Facilitator Superfamily JMB28_RS00940 PF07690 Major Facilitator Superfamily JMB28_RS00945 PF00535 Glycosyl transferase family 2 JMB28_RS00960 PF02417 Chromate transporter JMB28_RS00965 PF03551 Transcriptional regulator PadR-like family JMB28_RS00975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMB28_RS00975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMB28_RS00980 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS00980 PF00107 Zinc-binding dehydrogenase JMB28_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS00990 PF00107 Zinc-binding dehydrogenase JMB28_RS00995 PF03611 PTS system sugar-specific permease component JMB28_RS01000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS01015 PF12282 Signal transduction histidine kinase JMB28_RS01015 PF07568 Histidine kinase JMB28_RS01020 PF00072 Response regulator receiver domain JMB28_RS01020 PF03861 ANTAR domain JMB28_RS01025 PF04346 Ethanolamine utilisation protein, EutH JMB28_RS01035 PF00120 Glutamine synthetase, catalytic domain JMB28_RS01040 PF00171 Aldehyde dehydrogenase family JMB28_RS01045 PF07687 Peptidase dimerisation domain JMB28_RS01045 PF01546 Peptidase family M20/M25/M40 JMB28_RS01055 PF12867 DinB superfamily JMB28_RS01070 PF00072 Response regulator receiver domain JMB28_RS01070 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS01075 PF00512 His Kinase A (phospho-acceptor) domain JMB28_RS01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS01080 PF06737 Transglycosylase-like domain JMB28_RS01085 PF06737 Transglycosylase-like domain JMB28_RS01090 PF01872 RibD C-terminal domain JMB28_RS01095 PF12368 Rhodanase C-terminal JMB28_RS01095 PF17773 UPF0176 acylphosphatase like domain JMB28_RS01095 PF00581 Rhodanese-like domain JMB28_RS01105 PF01625 Peptide methionine sulfoxide reductase JMB28_RS01105 PF01641 SelR domain JMB28_RS01110 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS01115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS01115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS01120 PF00596 Class II Aldolase and Adducin N-terminal domain JMB28_RS01125 PF11762 L-arabinose isomerase C-terminal domain JMB28_RS01125 PF02610 L-arabinose isomerase JMB28_RS01130 PF00083 Sugar (and other) transporter JMB28_RS01135 PF05480 Staphylococcus haemolytic protein JMB28_RS01145 PF00005 ABC transporter JMB28_RS01155 PF03551 Transcriptional regulator PadR-like family JMB28_RS01155 PF10400 Virulence activator alpha C-term JMB28_RS01160 PF05870 Phenolic acid decarboxylase (PAD) JMB28_RS01170 PF03841 L-seryl-tRNA selenium transferase JMB28_RS01175 PF07071 KDGP aldolase JMB28_RS01180 PF00294 pfkB family carbohydrate kinase JMB28_RS01185 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS01185 PF07702 UTRA domain JMB28_RS01190 PF02447 GntP family permease JMB28_RS01195 PF00083 Sugar (and other) transporter JMB28_RS01200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS01200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS01205 PF01261 Xylose isomerase-like TIM barrel JMB28_RS01210 PF00480 ROK family JMB28_RS01245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS01245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS01250 PF02581 Thiamine monophosphate synthase JMB28_RS01255 PF01266 FAD dependent oxidoreductase JMB28_RS01265 PF05690 Thiazole biosynthesis protein ThiG JMB28_RS01270 PF00899 ThiF family JMB28_RS01275 PF13597 Anaerobic ribonucleoside-triphosphate reductase JMB28_RS01275 PF03477 ATP cone domain JMB28_RS01285 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JMB28_RS01290 PF17041 E domain JMB28_RS01290 PF00746 LPXTG cell wall anchor motif JMB28_RS01290 PF04650 YSIRK type signal peptide JMB28_RS01290 PF07501 G5 domain JMB28_RS01295 PF03358 NADPH-dependent FMN reductase JMB28_RS01305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS01310 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS01310 PF07702 UTRA domain JMB28_RS01315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JMB28_RS01315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JMB28_RS01325 PF02447 GntP family permease JMB28_RS01330 PF00005 ABC transporter JMB28_RS01350 PF01235 Sodium:alanine symporter family JMB28_RS01370 PF02548 Ketopantoate hydroxymethyltransferase JMB28_RS01375 PF02569 Pantoate-beta-alanine ligase JMB28_RS01380 PF06039 Malate:quinone oxidoreductase (Mqo) JMB28_RS01395 PF17961 Bacterial Ig domain JMB28_RS01395 PF00746 LPXTG cell wall anchor motif JMB28_RS01395 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JMB28_RS01395 PF17210 SdrD B-like domain JMB28_RS01395 PF04650 YSIRK type signal peptide JMB28_RS01400 PF00171 Aldehyde dehydrogenase family JMB28_RS01435 PF06779 Uncharacterised MFS-type transporter YbfB JMB28_RS01440 PF01207 Dihydrouridine synthase (Dus) JMB28_RS01445 PF07690 Major Facilitator Superfamily JMB28_RS01460 PF01551 Peptidase family M23 JMB28_RS01465 PF03009 Glycerophosphoryl diester phosphodiesterase family JMB28_RS01475 PF05552 Conserved TM helix JMB28_RS01480 PF01047 MarR family JMB28_RS01485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMB28_RS01485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JMB28_RS01485 PF00205 Thiamine pyrophosphate enzyme, central domain JMB28_RS01490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMB28_RS01495 PF00296 Luciferase-like monooxygenase JMB28_RS01500 PF01597 Glycine cleavage H-protein JMB28_RS01505 PF01661 Macro domain JMB28_RS01515 PF10437 Bacterial lipoate protein ligase C-terminus JMB28_RS01515 PF03099 Biotin/lipoate A/B protein ligase family JMB28_RS01525 PF11181 Heat induced stress protein YflT JMB28_RS01535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS01535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS01540 PF01969 Protein of unknown function DUF111 JMB28_RS01545 PF00731 AIR carboxylase JMB28_RS01550 PF02540 NAD synthase JMB28_RS01555 PF09861 Lactate racemase N-terminal domain JMB28_RS01560 PF03812 2-keto-3-deoxygluconate permease JMB28_RS01565 PF02595 Glycerate kinase family JMB28_RS01570 PF13556 PucR C-terminal helix-turn-helix domain JMB28_RS01570 PF05651 Putative sugar diacid recognition JMB28_RS01570 PF17853 GGDEF-like domain JMB28_RS01575 PF00893 Small Multidrug Resistance protein JMB28_RS01580 PF02028 BCCT, betaine/carnitine/choline family transporter JMB28_RS01595 PF00391 PEP-utilising enzyme, mobile domain JMB28_RS01595 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JMB28_RS01595 PF02896 PEP-utilising enzyme, TIM barrel domain JMB28_RS01600 PF03618 Kinase/pyrophosphorylase JMB28_RS01625 PF01381 Helix-turn-helix JMB28_RS01630 PF07690 Major Facilitator Superfamily JMB28_RS01635 PF13091 PLD-like domain JMB28_RS01635 PF13396 Phospholipase_D-nuclease N-terminal JMB28_RS01640 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS01640 PF00155 Aminotransferase class I and II JMB28_RS01645 PF00202 Aminotransferase class-III JMB28_RS01650 PF00171 Aldehyde dehydrogenase family JMB28_RS01665 PF00274 Fructose-bisphosphate aldolase class-I JMB28_RS01670 PF01209 ubiE/COQ5 methyltransferase family JMB28_RS01675 PF02028 BCCT, betaine/carnitine/choline family transporter JMB28_RS01685 PF00171 Aldehyde dehydrogenase family JMB28_RS01690 PF00732 GMC oxidoreductase JMB28_RS01690 PF05199 GMC oxidoreductase JMB28_RS01695 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS01695 PF00535 Glycosyl transferase family 2 JMB28_RS01705 PF00881 Nitroreductase family JMB28_RS01710 PF09587 Bacterial capsule synthesis protein PGA_cap JMB28_RS01715 PF01156 Inosine-uridine preferring nucleoside hydrolase JMB28_RS01720 PF07690 Major Facilitator Superfamily JMB28_RS01725 PF13520 Amino acid permease JMB28_RS01730 PF00202 Aminotransferase class-III JMB28_RS01735 PF02774 Semialdehyde dehydrogenase, dimerisation domain JMB28_RS01735 PF01118 Semialdehyde dehydrogenase, NAD binding domain JMB28_RS01740 PF01960 ArgJ family JMB28_RS01745 PF00696 Amino acid kinase family JMB28_RS01750 PF07687 Peptidase dimerisation domain JMB28_RS01750 PF01546 Peptidase family M20/M25/M40 JMB28_RS01760 PF03358 NADPH-dependent FMN reductase JMB28_RS01775 PF02652 L-lactate permease JMB28_RS01780 PF07690 Major Facilitator Superfamily JMB28_RS01785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JMB28_RS01785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JMB28_RS01790 PF02378 Phosphotransferase system, EIIC JMB28_RS01790 PF00367 phosphotransferase system, EIIB JMB28_RS01790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMB28_RS01795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JMB28_RS01800 PF00753 Metallo-beta-lactamase superfamily JMB28_RS01805 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS01805 PF00107 Zinc-binding dehydrogenase JMB28_RS01810 PF02378 Phosphotransferase system, EIIC JMB28_RS01820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS01825 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMB28_RS01830 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMB28_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS01840 PF00005 ABC transporter JMB28_RS01845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS01845 PF00874 PRD domain JMB28_RS01845 PF08279 HTH domain JMB28_RS01845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS01845 PF05043 Mga helix-turn-helix domain JMB28_RS01850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS01860 PF03611 PTS system sugar-specific permease component JMB28_RS01875 PF02558 Ketopantoate reductase PanE/ApbA JMB28_RS01875 PF08546 Ketopantoate reductase PanE/ApbA C terminal JMB28_RS01885 PF03180 NLPA lipoprotein JMB28_RS01890 PF00056 lactate/malate dehydrogenase, NAD binding domain JMB28_RS01890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JMB28_RS01895 PF00874 PRD domain JMB28_RS01895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS01895 PF08279 HTH domain JMB28_RS01895 PF05043 Mga helix-turn-helix domain JMB28_RS01900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS01900 PF02378 Phosphotransferase system, EIIC JMB28_RS01900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS01905 PF01238 Phosphomannose isomerase type I JMB28_RS01910 PF00480 ROK family JMB28_RS01915 PF01053 Cys/Met metabolism PLP-dependent enzyme JMB28_RS01920 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS01925 PF01053 Cys/Met metabolism PLP-dependent enzyme JMB28_RS01930 PF07690 Major Facilitator Superfamily JMB28_RS01950 PF01774 UreD urease accessory protein JMB28_RS01955 PF02492 CobW/HypB/UreG, nucleotide-binding domain JMB28_RS01960 PF01730 UreF JMB28_RS01965 PF02814 UreE urease accessory protein, N-terminal domain JMB28_RS01965 PF05194 UreE urease accessory protein, C-terminal domain JMB28_RS01970 PF00449 Urease alpha-subunit, N-terminal domain JMB28_RS01970 PF01979 Amidohydrolase family JMB28_RS01975 PF00699 Urease beta subunit JMB28_RS01980 PF00547 Urease, gamma subunit JMB28_RS01985 PF03253 Urea transporter JMB28_RS01990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMB28_RS01995 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS02000 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS02005 PF00005 ABC transporter JMB28_RS02010 PF00005 ABC transporter JMB28_RS02015 PF01497 Periplasmic binding protein JMB28_RS02025 PF13520 Amino acid permease JMB28_RS02030 PF00753 Metallo-beta-lactamase superfamily JMB28_RS02050 PF01180 Dihydroorotate dehydrogenase JMB28_RS02060 PF05979 Bacterial protein of unknown function (DUF896) JMB28_RS02080 PF13536 Putative multidrug resistance efflux transporter JMB28_RS02085 PF00324 Amino acid permease JMB28_RS02090 PF01156 Inosine-uridine preferring nucleoside hydrolase JMB28_RS02095 PF01551 Peptidase family M23 JMB28_RS02100 PF04343 Protein of unknown function, DUF488 JMB28_RS02115 PF01464 Transglycosylase SLT domain JMB28_RS02120 PF00155 Aminotransferase class I and II JMB28_RS02125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS02125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMB28_RS02130 PF00403 Heavy-metal-associated domain JMB28_RS02135 PF00403 Heavy-metal-associated domain JMB28_RS02140 PF00916 Sulfate permease family JMB28_RS02140 PF01740 STAS domain JMB28_RS02145 PF00005 ABC transporter JMB28_RS02150 PF02687 FtsX-like permease family JMB28_RS02165 PF00939 Sodium:sulfate symporter transmembrane region JMB28_RS02170 PF05684 Protein of unknown function (DUF819) JMB28_RS02175 PF12464 Maltose acetyltransferase JMB28_RS02175 PF00132 Bacterial transferase hexapeptide (six repeats) JMB28_RS02175 PF14602 Hexapeptide repeat of succinyl-transferase JMB28_RS02185 PF07286 Protein of unknown function (DUF1445) JMB28_RS02195 PF01757 Acyltransferase family JMB28_RS02200 PF00171 Aldehyde dehydrogenase family JMB28_RS02210 PF03176 MMPL family JMB28_RS02215 PF12833 Helix-turn-helix domain JMB28_RS02220 PF07690 Major Facilitator Superfamily JMB28_RS02225 PF01546 Peptidase family M20/M25/M40 JMB28_RS02225 PF07687 Peptidase dimerisation domain JMB28_RS02240 PF07690 Major Facilitator Superfamily JMB28_RS02250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JMB28_RS02250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JMB28_RS02255 PF02028 BCCT, betaine/carnitine/choline family transporter JMB28_RS02260 PF01810 LysE type translocator JMB28_RS02265 PF03466 LysR substrate binding domain JMB28_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS02275 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JMB28_RS02275 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JMB28_RS02280 PF02803 Thiolase, C-terminal domain JMB28_RS02280 PF00108 Thiolase, N-terminal domain JMB28_RS02285 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JMB28_RS02290 PF08450 SMP-30/Gluconolactonase/LRE-like region JMB28_RS02295 PF05257 CHAP domain JMB28_RS02300 PF03553 Na+/H+ antiporter family JMB28_RS02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS02305 PF03466 LysR substrate binding domain JMB28_RS02310 PF03788 LrgA family JMB28_RS02315 PF04172 LrgB-like family JMB28_RS02320 PF00205 Thiamine pyrophosphate enzyme, central domain JMB28_RS02320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JMB28_RS02320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMB28_RS02325 PF03606 C4-dicarboxylate anaerobic carrier JMB28_RS02330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMB28_RS02330 PF02378 Phosphotransferase system, EIIC JMB28_RS02330 PF00367 phosphotransferase system, EIIB JMB28_RS02345 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS02365 PF00934 PE family JMB28_RS02365 PF07859 alpha/beta hydrolase fold JMB28_RS02370 PF00892 EamA-like transporter family JMB28_RS02375 PF12833 Helix-turn-helix domain JMB28_RS02375 PF02311 AraC-like ligand binding domain JMB28_RS02380 PF01546 Peptidase family M20/M25/M40 JMB28_RS02380 PF07687 Peptidase dimerisation domain JMB28_RS02390 PF08245 Mur ligase middle domain JMB28_RS02395 PF14102 Capsule biosynthesis CapC JMB28_RS02400 PF09587 Bacterial capsule synthesis protein PGA_cap JMB28_RS02415 PF00202 Aminotransferase class-III JMB28_RS02420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JMB28_RS02425 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS02425 PF00107 Zinc-binding dehydrogenase JMB28_RS02430 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS02435 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JMB28_RS02435 PF00535 Glycosyl transferase family 2 JMB28_RS02450 PF00005 ABC transporter JMB28_RS02465 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS02470 PF07687 Peptidase dimerisation domain JMB28_RS02470 PF01546 Peptidase family M20/M25/M40 JMB28_RS02480 PF04203 Sortase domain JMB28_RS02485 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JMB28_RS02490 PF01380 SIS domain JMB28_RS02495 PF00480 ROK family JMB28_RS02500 PF00701 Dihydrodipicolinate synthetase family JMB28_RS02505 PF00474 Sodium:solute symporter family JMB28_RS02520 PF02525 Flavodoxin-like fold JMB28_RS02530 PF00881 Nitroreductase family JMB28_RS02535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS02545 PF00664 ABC transporter transmembrane region JMB28_RS02545 PF00005 ABC transporter JMB28_RS02550 PF00005 ABC transporter JMB28_RS02550 PF00664 ABC transporter transmembrane region JMB28_RS02560 PF01297 Zinc-uptake complex component A periplasmic JMB28_RS02565 PF00171 Aldehyde dehydrogenase family JMB28_RS02570 PF01047 MarR family JMB28_RS02575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS02580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS02585 PF01738 Dienelactone hydrolase family JMB28_RS02590 PF00939 Sodium:sulfate symporter transmembrane region JMB28_RS02605 PF06874 Firmicute fructose-1,6-bisphosphatase JMB28_RS02610 PF00474 Sodium:solute symporter family JMB28_RS02615 PF09335 SNARE associated Golgi protein JMB28_RS02620 PF07690 Major Facilitator Superfamily JMB28_RS02630 PF03306 Alpha-acetolactate decarboxylase JMB28_RS02635 PF12805 FUSC-like inner membrane protein yccS JMB28_RS02650 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JMB28_RS02655 PF04607 Region found in RelA / SpoT proteins JMB28_RS02665 PF07729 FCD domain JMB28_RS02665 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS02670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS02670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS02675 PF02447 GntP family permease JMB28_RS02690 PF12833 Helix-turn-helix domain JMB28_RS02700 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JMB28_RS02700 PF00703 Glycosyl hydrolases family 2 JMB28_RS02700 PF02837 Glycosyl hydrolases family 2, sugar binding domain JMB28_RS02705 PF00933 Glycosyl hydrolase family 3 N terminal domain JMB28_RS02715 PF01081 KDPG and KHG aldolase JMB28_RS02725 PF02614 Glucuronate isomerase JMB28_RS02730 PF03786 D-mannonate dehydratase (UxuA) JMB28_RS02745 PF00106 short chain dehydrogenase JMB28_RS02770 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JMB28_RS02770 PF01502 Phosphoribosyl-AMP cyclohydrolase JMB28_RS02775 PF00977 Histidine biosynthesis protein JMB28_RS02780 PF00977 Histidine biosynthesis protein JMB28_RS02785 PF00117 Glutamine amidotransferase class-I JMB28_RS02790 PF00475 Imidazoleglycerol-phosphate dehydratase JMB28_RS02795 PF00155 Aminotransferase class I and II JMB28_RS02800 PF00815 Histidinol dehydrogenase JMB28_RS02805 PF01634 ATP phosphoribosyltransferase JMB28_RS02810 PF13393 Histidyl-tRNA synthetase JMB28_RS02815 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS02820 PF13089 Polyphosphate kinase N-terminal domain JMB28_RS02820 PF17941 Polyphosphate kinase C-terminal domain 1 JMB28_RS02820 PF13090 Polyphosphate kinase C-terminal domain 2 JMB28_RS02820 PF02503 Polyphosphate kinase middle domain JMB28_RS02825 PF02541 Ppx/GppA phosphatase family JMB28_RS02830 PF03806 AbgT putative transporter family JMB28_RS02840 PF05343 M42 glutamyl aminopeptidase JMB28_RS02850 PF01645 Conserved region in glutamate synthase JMB28_RS02860 PF00005 ABC transporter JMB28_RS02865 PF03649 Uncharacterised protein family (UPF0014) JMB28_RS02870 PF07690 Major Facilitator Superfamily JMB28_RS02875 PF03600 Citrate transporter JMB28_RS02880 PF13520 Amino acid permease JMB28_RS02885 PF08818 Domain of unknown function (DU1801) JMB28_RS02890 PF00440 Bacterial regulatory proteins, tetR family JMB28_RS02890 PF08361 MAATS-type transcriptional repressor, C-terminal region JMB28_RS02895 PF05853 beta-keto acid cleavage enzyme JMB28_RS02900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JMB28_RS02900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JMB28_RS02910 PF00571 CBS domain JMB28_RS02910 PF00005 ABC transporter JMB28_RS02915 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS02920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JMB28_RS02925 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS02935 PF04172 LrgB-like family JMB28_RS02940 PF03788 LrgA family JMB28_RS02945 PF04397 LytTr DNA-binding domain JMB28_RS02945 PF00072 Response regulator receiver domain JMB28_RS02950 PF06580 Histidine kinase JMB28_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS02950 PF13492 GAF domain JMB28_RS02950 PF07694 5TMR of 5TMR-LYT JMB28_RS02955 PF07690 Major Facilitator Superfamily JMB28_RS02960 PF01546 Peptidase family M20/M25/M40 JMB28_RS02980 PF01470 Pyroglutamyl peptidase JMB28_RS02990 PF02096 60Kd inner membrane protein JMB28_RS02995 PF00999 Sodium/hydrogen exchanger family JMB28_RS03015 PF07690 Major Facilitator Superfamily JMB28_RS03025 PF16916 Dimerisation domain of Zinc Transporter JMB28_RS03025 PF01545 Cation efflux family JMB28_RS03035 PF00300 Histidine phosphatase superfamily (branch 1) JMB28_RS03045 PF07690 Major Facilitator Superfamily JMB28_RS03055 PF02388 FemAB family JMB28_RS03065 PF13462 Thioredoxin JMB28_RS03070 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JMB28_RS03070 PF01297 Zinc-uptake complex component A periplasmic JMB28_RS03075 PF04264 YceI-like domain JMB28_RS03085 PF03551 Transcriptional regulator PadR-like family JMB28_RS03105 PF00232 Glycosyl hydrolase family 1 JMB28_RS03110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMB28_RS03110 PF02378 Phosphotransferase system, EIIC JMB28_RS03110 PF00367 phosphotransferase system, EIIB JMB28_RS03115 PF07702 UTRA domain JMB28_RS03115 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS03120 PF02082 Transcriptional regulator JMB28_RS03125 PF01226 Formate/nitrite transporter JMB28_RS03130 PF00583 Acetyltransferase (GNAT) family JMB28_RS03145 PF18267 Rubredoxin NAD+ reductase C-terminal domain JMB28_RS03145 PF04324 BFD-like [2Fe-2S] binding domain JMB28_RS03145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JMB28_RS03145 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS03145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JMB28_RS03150 PF00355 Rieske [2Fe-2S] domain JMB28_RS03155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMB28_RS03160 PF04650 YSIRK type signal peptide JMB28_RS03160 PF04650 YSIRK type signal peptide JMB28_RS03165 PF14710 Respiratory nitrate reductase alpha N-terminal JMB28_RS03165 PF00384 Molybdopterin oxidoreductase JMB28_RS03165 PF01568 Molydopterin dinucleotide binding domain JMB28_RS03170 PF13247 4Fe-4S dicluster domain JMB28_RS03170 PF14711 Respiratory nitrate reductase beta C-terminal JMB28_RS03180 PF02665 Nitrate reductase gamma subunit JMB28_RS03190 PF07730 Histidine kinase JMB28_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS03195 PF00072 Response regulator receiver domain JMB28_RS03195 PF00196 Bacterial regulatory proteins, luxR family JMB28_RS03200 PF07690 Major Facilitator Superfamily JMB28_RS03205 PF00011 Hsp20/alpha crystallin family JMB28_RS03210 PF00011 Hsp20/alpha crystallin family JMB28_RS03215 PF01047 MarR family JMB28_RS03235 PF01510 N-acetylmuramoyl-L-alanine amidase JMB28_RS03235 PF05257 CHAP domain JMB28_RS03235 PF08460 Bacterial SH3 domain JMB28_RS03240 PF02378 Phosphotransferase system, EIIC JMB28_RS03240 PF00367 phosphotransferase system, EIIB JMB28_RS03260 PF02690 Na+/Pi-cotransporter JMB28_RS03270 PF00296 Luciferase-like monooxygenase JMB28_RS03275 PF00296 Luciferase-like monooxygenase JMB28_RS03280 PF03606 C4-dicarboxylate anaerobic carrier JMB28_RS03285 PF08220 DeoR-like helix-turn-helix domain JMB28_RS03285 PF00455 DeoR C terminal sensor domain JMB28_RS03290 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS03290 PF00107 Zinc-binding dehydrogenase JMB28_RS03295 PF02733 Dak1 domain JMB28_RS03300 PF02734 DAK2 domain JMB28_RS03305 PF02502 Ribose/Galactose Isomerase JMB28_RS03315 PF01497 Periplasmic binding protein JMB28_RS03320 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS03325 PF00583 Acetyltransferase (GNAT) family JMB28_RS03330 PF00083 Sugar (and other) transporter JMB28_RS03335 PF00107 Zinc-binding dehydrogenase JMB28_RS03335 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS03340 PF13673 Acetyltransferase (GNAT) domain JMB28_RS03350 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS03355 PF02652 L-lactate permease JMB28_RS03360 PF13439 Glycosyltransferase Family 4 JMB28_RS03360 PF00534 Glycosyl transferases group 1 JMB28_RS03365 PF06039 Malate:quinone oxidoreductase (Mqo) JMB28_RS03370 PF00672 HAMP domain JMB28_RS03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS03370 PF00512 His Kinase A (phospho-acceptor) domain JMB28_RS03375 PF00072 Response regulator receiver domain JMB28_RS03375 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS03380 PF02687 FtsX-like permease family JMB28_RS03385 PF00005 ABC transporter JMB28_RS03395 PF12802 MarR family JMB28_RS03405 PF07690 Major Facilitator Superfamily JMB28_RS03420 PF07690 Major Facilitator Superfamily JMB28_RS03445 PF01544 CorA-like Mg2+ transporter protein JMB28_RS03450 PF01070 FMN-dependent dehydrogenase JMB28_RS03455 PF03616 Sodium/glutamate symporter JMB28_RS03460 PF03551 Transcriptional regulator PadR-like family JMB28_RS03475 PF03553 Na+/H+ antiporter family JMB28_RS03480 PF02245 Methylpurine-DNA glycosylase (MPG) JMB28_RS03485 PF05656 Protein of unknown function (DUF805) JMB28_RS03490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS03490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS03495 PF00005 ABC transporter JMB28_RS03495 PF13732 Domain of unknown function (DUF4162) JMB28_RS03505 PF01263 Aldose 1-epimerase JMB28_RS03510 PF03475 3-alpha domain JMB28_RS03510 PF03473 MOSC domain JMB28_RS03515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JMB28_RS03525 PF00491 Arginase family JMB28_RS03530 PF03466 LysR substrate binding domain JMB28_RS03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS03535 PF07670 Nucleoside recognition JMB28_RS03540 PF01175 Urocanase Rossmann-like domain JMB28_RS03540 PF17391 Urocanase N-terminal domain JMB28_RS03540 PF17392 Urocanase C-terminal domain JMB28_RS03545 PF01979 Amidohydrolase family JMB28_RS03550 PF00916 Sulfate permease family JMB28_RS03550 PF01740 STAS domain JMB28_RS03555 PF07687 Peptidase dimerisation domain JMB28_RS03555 PF01546 Peptidase family M20/M25/M40 JMB28_RS03565 PF01613 Flavin reductase like domain JMB28_RS03580 PF01380 SIS domain JMB28_RS03580 PF01418 Helix-turn-helix domain, rpiR family JMB28_RS03585 PF02378 Phosphotransferase system, EIIC JMB28_RS03585 PF00367 phosphotransferase system, EIIB JMB28_RS03595 PF01758 Sodium Bile acid symporter family JMB28_RS03600 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS03625 PF00324 Amino acid permease JMB28_RS03630 PF00245 Alkaline phosphatase JMB28_RS03640 PF00367 phosphotransferase system, EIIB JMB28_RS03640 PF02378 Phosphotransferase system, EIIC JMB28_RS03645 PF01380 SIS domain JMB28_RS03665 PF00459 Inositol monophosphatase family JMB28_RS03670 PF03816 Cell envelope-related transcriptional attenuator domain JMB28_RS03675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JMB28_RS03675 PF01568 Molydopterin dinucleotide binding domain JMB28_RS03675 PF00384 Molybdopterin oxidoreductase JMB28_RS03675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JMB28_RS03675 PF12838 4Fe-4S dicluster domain JMB28_RS03690 PF05036 Sporulation related domain JMB28_RS03690 PF08239 Bacterial SH3 domain JMB28_RS03690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMB28_RS03695 PF01494 FAD binding domain JMB28_RS03700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS03700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMB28_RS03705 PF00893 Small Multidrug Resistance protein JMB28_RS03710 PF00893 Small Multidrug Resistance protein JMB28_RS03715 PF05257 CHAP domain JMB28_RS03725 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain JMB28_RS03725 PF02558 Ketopantoate reductase PanE/ApbA JMB28_RS03730 PF03553 Na+/H+ antiporter family JMB28_RS03735 PF05257 CHAP domain JMB28_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS03770 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMB28_RS03775 PF00005 ABC transporter JMB28_RS03780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JMB28_RS03780 PF02770 Acyl-CoA dehydrogenase, middle domain JMB28_RS03780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JMB28_RS03785 PF01497 Periplasmic binding protein JMB28_RS03790 PF02632 BioY family JMB28_RS03800 PF02634 FdhD/NarQ family JMB28_RS03805 PF00356 Bacterial regulatory proteins, lacI family JMB28_RS03810 PF00288 GHMP kinases N terminal domain JMB28_RS03810 PF10509 Galactokinase galactose-binding signature JMB28_RS03810 PF08544 GHMP kinases C terminal JMB28_RS03815 PF16363 GDP-mannose 4,6 dehydratase JMB28_RS03820 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JMB28_RS03820 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JMB28_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS03835 PF03459 TOBE domain JMB28_RS03835 PF00005 ABC transporter JMB28_RS03850 PF00899 ThiF family JMB28_RS03855 PF00994 Probable molybdopterin binding domain JMB28_RS03860 PF01967 MoaC family JMB28_RS03865 PF03454 MoeA C-terminal region (domain IV) JMB28_RS03865 PF00994 Probable molybdopterin binding domain JMB28_RS03865 PF03453 MoeA N-terminal region (domain I and II) JMB28_RS03870 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JMB28_RS03875 PF02391 MoaE protein JMB28_RS03880 PF02597 ThiS family JMB28_RS03885 PF12804 MobA-like NTP transferase domain JMB28_RS03890 PF06463 Molybdenum Cofactor Synthesis C JMB28_RS03890 PF04055 Radical SAM superfamily JMB28_RS03895 PF01047 MarR family JMB28_RS03905 PF01047 MarR family JMB28_RS03915 PF02388 FemAB family JMB28_RS03920 PF00873 AcrB/AcrD/AcrF family JMB28_RS03945 PF06800 Sugar transport protein JMB28_RS03955 PF01131 DNA topoisomerase JMB28_RS03955 PF01751 Toprim domain JMB28_RS03960 PF00860 Permease family JMB28_RS03970 PF00338 Ribosomal protein S10p/S20e JMB28_RS03975 PF00297 Ribosomal protein L3 JMB28_RS03980 PF00573 Ribosomal protein L4/L1 family JMB28_RS03985 PF00276 Ribosomal protein L23 JMB28_RS03990 PF03947 Ribosomal Proteins L2, C-terminal domain JMB28_RS03990 PF00181 Ribosomal Proteins L2, RNA binding domain JMB28_RS03995 PF00203 Ribosomal protein S19 JMB28_RS04000 PF00237 Ribosomal protein L22p/L17e JMB28_RS04005 PF00189 Ribosomal protein S3, C-terminal domain JMB28_RS04005 PF07650 KH domain JMB28_RS04010 PF00252 Ribosomal protein L16p/L10e JMB28_RS04015 PF00831 Ribosomal L29 protein JMB28_RS04020 PF00366 Ribosomal protein S17 JMB28_RS04025 PF00238 Ribosomal protein L14p/L23e JMB28_RS04030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JMB28_RS04030 PF00467 KOW motif JMB28_RS04035 PF00281 Ribosomal protein L5 JMB28_RS04035 PF00673 ribosomal L5P family C-terminus JMB28_RS04040 PF00253 Ribosomal protein S14p/S29e JMB28_RS04045 PF00410 Ribosomal protein S8 JMB28_RS04050 PF00347 Ribosomal protein L6 JMB28_RS04055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JMB28_RS04060 PF03719 Ribosomal protein S5, C-terminal domain JMB28_RS04060 PF00333 Ribosomal protein S5, N-terminal domain JMB28_RS04065 PF00327 Ribosomal protein L30p/L7e JMB28_RS04070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JMB28_RS04075 PF00344 SecY translocase JMB28_RS04080 PF05191 Adenylate kinase, active site lid JMB28_RS04085 PF01176 Translation initiation factor 1A / IF-1 JMB28_RS04090 PF00444 Ribosomal protein L36 JMB28_RS04095 PF00416 Ribosomal protein S13/S18 JMB28_RS04100 PF00411 Ribosomal protein S11 JMB28_RS04105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JMB28_RS04105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JMB28_RS04105 PF01000 RNA polymerase Rpb3/RpoA insert domain JMB28_RS04110 PF01196 Ribosomal protein L17 JMB28_RS04115 PF00005 ABC transporter JMB28_RS04120 PF00005 ABC transporter JMB28_RS04125 PF02361 Cobalt transport protein JMB28_RS04130 PF01416 tRNA pseudouridine synthase JMB28_RS04135 PF00572 Ribosomal protein L13 JMB28_RS04140 PF00380 Ribosomal protein S9/S16 JMB28_RS04150 PF00296 Luciferase-like monooxygenase JMB28_RS04155 PF00107 Zinc-binding dehydrogenase JMB28_RS04155 PF16884 N-terminal domain of oxidoreductase JMB28_RS04160 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS04160 PF00107 Zinc-binding dehydrogenase JMB28_RS04165 PF02028 BCCT, betaine/carnitine/choline family transporter JMB28_RS04180 PF03780 Asp23 family, cell envelope-related function JMB28_RS04185 PF04183 IucA / IucC family JMB28_RS04185 PF06276 Ferric iron reductase FhuF-like transporter JMB28_RS04190 PF05977 Transmembrane secretion effector JMB28_RS04195 PF04183 IucA / IucC family JMB28_RS04195 PF06276 Ferric iron reductase FhuF-like transporter JMB28_RS04200 PF01168 Alanine racemase, N-terminal domain JMB28_RS04205 PF01497 Periplasmic binding protein JMB28_RS04210 PF01032 FecCD transport family JMB28_RS04215 PF01032 FecCD transport family JMB28_RS04220 PF07670 Nucleoside recognition JMB28_RS04225 PF03992 Antibiotic biosynthesis monooxygenase JMB28_RS04235 PF04307 LexA-binding, inner membrane-associated putative hydrolase JMB28_RS04240 PF01704 UTP--glucose-1-phosphate uridylyltransferase JMB28_RS04245 PF03006 Haemolysin-III related JMB28_RS04250 PF07690 Major Facilitator Superfamily JMB28_RS04255 PF17080 Multidrug Resistance efflux pump JMB28_RS04260 PF10609 NUBPL iron-transfer P-loop NTPase JMB28_RS04310 PF00491 Arginase family JMB28_RS04315 PF02457 DisA bacterial checkpoint controller nucleotide-binding JMB28_RS04325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMB28_RS04325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMB28_RS04325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMB28_RS04325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMB28_RS04330 PF01232 Mannitol dehydrogenase Rossmann domain JMB28_RS04330 PF08125 Mannitol dehydrogenase C-terminal domain JMB28_RS04335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS04340 PF05043 Mga helix-turn-helix domain JMB28_RS04340 PF00874 PRD domain JMB28_RS04340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS04340 PF08279 HTH domain JMB28_RS04340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS04345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS04345 PF02378 Phosphotransferase system, EIIC JMB28_RS04350 PF01380 SIS domain JMB28_RS04360 PF00005 ABC transporter JMB28_RS04385 PF01545 Cation efflux family JMB28_RS04385 PF16916 Dimerisation domain of Zinc Transporter JMB28_RS04390 PF01022 Bacterial regulatory protein, arsR family JMB28_RS04395 PF13460 NAD(P)H-binding JMB28_RS04400 PF07729 FCD domain JMB28_RS04400 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS04405 PF01238 Phosphomannose isomerase type I JMB28_RS04415 PF03601 Conserved hypothetical protein 698 JMB28_RS04430 PF00294 pfkB family carbohydrate kinase JMB28_RS04435 PF00210 Ferritin-like domain JMB28_RS04440 PF01048 Phosphorylase superfamily JMB28_RS04445 PF01791 DeoC/LacD family aldolase JMB28_RS04450 PF02885 Glycosyl transferase family, helical bundle domain JMB28_RS04450 PF00591 Glycosyl transferase family, a/b domain JMB28_RS04450 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JMB28_RS04455 PF01676 Metalloenzyme superfamily JMB28_RS04465 PF02664 S-Ribosylhomocysteinase (LuxS) JMB28_RS04485 PF01797 Transposase IS200 like JMB28_RS04490 PF03630 Fumble JMB28_RS04500 PF05066 HB1, ASXL, restriction endonuclease HTH domain JMB28_RS04505 PF00117 Glutamine amidotransferase class-I JMB28_RS04505 PF06418 CTP synthase N-terminus JMB28_RS04510 PF01116 Fructose-bisphosphate aldolase class-II JMB28_RS04515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMB28_RS04525 PF00171 Aldehyde dehydrogenase family JMB28_RS04530 PF07497 Rho termination factor, RNA-binding domain JMB28_RS04530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMB28_RS04530 PF07498 Rho termination factor, N-terminal domain JMB28_RS04535 PF01197 Ribosomal protein L31 JMB28_RS04540 PF00265 Thymidine kinase JMB28_RS04545 PF00472 RF-1 domain JMB28_RS04545 PF03462 PCRF domain JMB28_RS04550 PF05175 Methyltransferase small domain JMB28_RS04550 PF17827 PrmC N-terminal domain JMB28_RS04555 PF01300 Telomere recombination JMB28_RS04555 PF03481 Putative GTP-binding controlling metal-binding JMB28_RS04560 PF01451 Low molecular weight phosphotyrosine protein phosphatase JMB28_RS04565 PF04260 Protein of unknown function (DUF436) JMB28_RS04570 PF00464 Serine hydroxymethyltransferase JMB28_RS04580 PF02350 UDP-N-acetylglucosamine 2-epimerase JMB28_RS04590 PF00119 ATP synthase A chain JMB28_RS04595 PF00137 ATP synthase subunit C JMB28_RS04600 PF00430 ATP synthase B/B' CF(0) JMB28_RS04605 PF00213 ATP synthase delta (OSCP) subunit JMB28_RS04610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMB28_RS04610 PF00306 ATP synthase alpha/beta chain, C terminal domain JMB28_RS04610 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMB28_RS04615 PF00231 ATP synthase JMB28_RS04620 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMB28_RS04620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMB28_RS04625 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JMB28_RS04625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JMB28_RS04635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMB28_RS04640 PF07977 FabA-like domain JMB28_RS04650 PF00436 Single-strand binding protein family JMB28_RS04655 PF06737 Transglycosylase-like domain JMB28_RS04660 PF03070 TENA/THI-4/PQQC family JMB28_RS04665 PF08543 Phosphomethylpyrimidine kinase JMB28_RS04670 PF02110 Hydroxyethylthiazole kinase family JMB28_RS04675 PF02581 Thiamine monophosphate synthase JMB28_RS04680 PF02096 60Kd inner membrane protein JMB28_RS04685 PF01966 HD domain JMB28_RS04690 PF13396 Phospholipase_D-nuclease N-terminal JMB28_RS04690 PF13091 PLD-like domain JMB28_RS04695 PF02583 Metal-sensitive transcriptional repressor JMB28_RS04710 PF01098 Cell cycle protein JMB28_RS04715 PF01820 D-ala D-ala ligase N-terminus JMB28_RS04715 PF07478 D-ala D-ala ligase C-terminus JMB28_RS04720 PF08245 Mur ligase middle domain JMB28_RS04720 PF02875 Mur ligase family, glutamate ligase domain JMB28_RS04720 PF01225 Mur ligase family, catalytic domain JMB28_RS04725 PF00271 Helicase conserved C-terminal domain JMB28_RS04725 PF00270 DEAD/DEAH box helicase JMB28_RS04735 PF03703 Bacterial PH domain JMB28_RS04745 PF01648 4'-phosphopantetheinyl transferase superfamily JMB28_RS04750 PF00842 Alanine racemase, C-terminal domain JMB28_RS04750 PF01168 Alanine racemase, N-terminal domain JMB28_RS04760 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JMB28_RS04770 PF07228 Stage II sporulation protein E (SpoIIE) JMB28_RS04770 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JMB28_RS04775 PF01740 STAS domain JMB28_RS04780 PF13581 Histidine kinase-like ATPase domain JMB28_RS04785 PF04545 Sigma-70, region 4 JMB28_RS04785 PF04542 Sigma-70 region 2 JMB28_RS04785 PF04539 Sigma-70 region 3 JMB28_RS04790 PF00575 S1 RNA binding domain JMB28_RS04790 PF09371 Tex-like protein N-terminal domain JMB28_RS04790 PF17674 HHH domain JMB28_RS04790 PF16921 Tex protein YqgF-like domain JMB28_RS04795 PF10263 SprT-like family JMB28_RS04795 PF17283 SprT-like zinc ribbon domain JMB28_RS04825 PF00585 C-terminal regulatory domain of Threonine dehydratase JMB28_RS04825 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS04830 PF00694 Aconitase C-terminal domain JMB28_RS04835 PF00330 Aconitase family (aconitate hydratase) JMB28_RS04840 PF00180 Isocitrate/isopropylmalate dehydrogenase JMB28_RS04845 PF00682 HMGL-like JMB28_RS04845 PF08502 LeuA allosteric (dimerisation) domain JMB28_RS04850 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JMB28_RS04850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JMB28_RS04855 PF10369 Small subunit of acetolactate synthase JMB28_RS04855 PF01842 ACT domain JMB28_RS04860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMB28_RS04860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JMB28_RS04860 PF00205 Thiamine pyrophosphate enzyme, central domain JMB28_RS04865 PF00920 Dehydratase family JMB28_RS04870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JMB28_RS04875 PF00814 Glycoprotease family JMB28_RS04880 PF00583 Acetyltransferase (GNAT) family JMB28_RS04885 PF00814 Glycoprotease family JMB28_RS04895 PF05192 MutS domain III JMB28_RS04895 PF01624 MutS domain I JMB28_RS04895 PF05188 MutS domain II JMB28_RS04895 PF05190 MutS family domain IV JMB28_RS04895 PF00488 MutS domain V JMB28_RS04900 PF12848 ABC transporter JMB28_RS04900 PF16326 ABC transporter C-terminal domain JMB28_RS04900 PF00005 ABC transporter JMB28_RS04905 PF02629 CoA binding domain JMB28_RS04905 PF06971 Putative DNA-binding protein N-terminus JMB28_RS04910 PF04143 Sulphur transport JMB28_RS04915 PF01206 Sulfurtransferase TusA JMB28_RS04925 PF00356 Bacterial regulatory proteins, lacI family JMB28_RS04925 PF13407 Periplasmic binding protein domain JMB28_RS04930 PF00251 Glycosyl hydrolases family 32 N-terminal domain JMB28_RS04930 PF08244 Glycosyl hydrolases family 32 C terminal JMB28_RS04935 PF00294 pfkB family carbohydrate kinase JMB28_RS04940 PF04397 LytTr DNA-binding domain JMB28_RS04940 PF00072 Response regulator receiver domain JMB28_RS04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS04945 PF00989 PAS fold JMB28_RS04945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JMB28_RS04945 PF17203 Single cache domain 3 JMB28_RS04955 PF04647 Accessory gene regulator B JMB28_RS04960 PF00795 Carbon-nitrogen hydrolase JMB28_RS04975 PF02517 CPBP intramembrane metalloprotease JMB28_RS04980 PF00166 Chaperonin 10 Kd subunit JMB28_RS04985 PF00118 TCP-1/cpn60 chaperonin family JMB28_RS05005 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS05010 PF00005 ABC transporter JMB28_RS05020 PF00005 ABC transporter JMB28_RS05065 PF10282 Lactonase, 7-bladed beta-propeller JMB28_RS05070 PF00171 Aldehyde dehydrogenase family JMB28_RS05075 PF01368 DHH family JMB28_RS05075 PF02833 DHHA2 domain JMB28_RS05080 PF00857 Isochorismatase family JMB28_RS05090 PF00939 Sodium:sulfate symporter transmembrane region JMB28_RS05095 PF00800 Prephenate dehydratase JMB28_RS05100 PF02898 Nitric oxide synthase, oxygenase domain JMB28_RS05105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JMB28_RS05105 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JMB28_RS05105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JMB28_RS05110 PF02540 NAD synthase JMB28_RS05115 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMB28_RS05125 PF10397 Adenylosuccinate lyase C-terminus JMB28_RS05125 PF00206 Lyase JMB28_RS05130 PF01371 Trp repressor protein JMB28_RS05135 PF02557 D-alanyl-D-alanine carboxypeptidase JMB28_RS05140 PF01884 PcrB family JMB28_RS05145 PF13361 UvrD-like helicase C-terminal domain JMB28_RS05145 PF00580 UvrD/REP helicase N-terminal domain JMB28_RS05150 PF01653 NAD-dependent DNA ligase adenylation domain JMB28_RS05150 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JMB28_RS05150 PF00533 BRCA1 C Terminus (BRCT) domain JMB28_RS05150 PF03120 NAD-dependent DNA ligase OB-fold domain JMB28_RS05150 PF12826 Helix-hairpin-helix motif JMB28_RS05155 PF07537 CamS sex pheromone cAM373 precursor JMB28_RS05160 PF00474 Sodium:solute symporter family JMB28_RS05165 PF02686 Glu-tRNAGln amidotransferase C subunit JMB28_RS05170 PF01425 Amidase JMB28_RS05175 PF02934 GatB/GatE catalytic domain JMB28_RS05175 PF02637 GatB domain JMB28_RS05180 PF00781 Diacylglycerol kinase catalytic domain JMB28_RS05185 PF05958 tRNA (Uracil-5-)-methyltransferase JMB28_RS05195 PF00817 impB/mucB/samB family JMB28_RS05195 PF11799 impB/mucB/samB family C-terminal domain JMB28_RS05205 PF00210 Ferritin-like domain JMB28_RS05210 PF08245 Mur ligase middle domain JMB28_RS05210 PF08353 Domain of unknown function (DUF1727) JMB28_RS05215 PF07685 CobB/CobQ-like glutamine amidotransferase domain JMB28_RS05220 PF06081 Aromatic acid exporter family member 1 JMB28_RS05225 PF00557 Metallopeptidase family M24 JMB28_RS05240 PF07730 Histidine kinase JMB28_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS05245 PF00072 Response regulator receiver domain JMB28_RS05245 PF00196 Bacterial regulatory proteins, luxR family JMB28_RS05250 PF03631 Virulence factor BrkB JMB28_RS05260 PF01451 Low molecular weight phosphotyrosine protein phosphatase JMB28_RS05265 PF06569 Protein of unknown function (DUF1128) JMB28_RS05270 PF02073 Thermophilic metalloprotease (M29) JMB28_RS05275 PF03061 Thioesterase superfamily JMB28_RS05280 PF04055 Radical SAM superfamily JMB28_RS05280 PF08756 YfkB-like domain JMB28_RS05290 PF01965 DJ-1/PfpI family JMB28_RS05295 PF00912 Transglycosylase JMB28_RS05300 PF02631 RecX family JMB28_RS05310 PF00005 ABC transporter JMB28_RS05320 PF04307 LexA-binding, inner membrane-associated putative hydrolase JMB28_RS05325 PF00730 HhH-GPD superfamily base excision DNA repair protein JMB28_RS05325 PF14815 NUDIX domain JMB28_RS05330 PF04167 Protein of unknown function (DUF402) JMB28_RS05335 PF00664 ABC transporter transmembrane region JMB28_RS05335 PF00005 ABC transporter JMB28_RS05340 PF06081 Aromatic acid exporter family member 1 JMB28_RS05345 PF00202 Aminotransferase class-III JMB28_RS05350 PF00578 AhpC/TSA family JMB28_RS05355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMB28_RS05355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS05360 PF01475 Ferric uptake regulator family JMB28_RS05515 PF02261 Aspartate decarboxylase JMB28_RS05530 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS05535 PF00005 ABC transporter JMB28_RS05540 PF08331 Domain of unknown function (DUF1730) JMB28_RS05545 PF00588 SpoU rRNA Methylase family JMB28_RS05550 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JMB28_RS05565 PF10415 Fumarase C C-terminus JMB28_RS05565 PF00206 Lyase JMB28_RS05575 PF01479 S4 domain JMB28_RS05575 PF00849 RNA pseudouridylate synthase JMB28_RS05580 PF07730 Histidine kinase JMB28_RS05580 PF13185 GAF domain JMB28_RS05585 PF00072 Response regulator receiver domain JMB28_RS05585 PF00196 Bacterial regulatory proteins, luxR family JMB28_RS05590 PF00375 Sodium:dicarboxylate symporter family JMB28_RS05595 PF01098 Cell cycle protein JMB28_RS05600 PF03816 Cell envelope-related transcriptional attenuator domain JMB28_RS05605 PF01925 Sulfite exporter TauE/SafE JMB28_RS05615 PF01061 ABC-2 type transporter JMB28_RS05620 PF04055 Radical SAM superfamily JMB28_RS05625 PF02901 Pyruvate formate lyase-like JMB28_RS05625 PF01228 Glycine radical JMB28_RS05630 PF01842 ACT domain JMB28_RS05630 PF00551 Formyl transferase JMB28_RS05640 PF04286 Protein of unknown function (DUF445) JMB28_RS05645 PF06133 Control of competence regulator ComK, YlbF/YmcA JMB28_RS05650 PF00149 Calcineurin-like phosphoesterase JMB28_RS05655 PF13514 AAA domain JMB28_RS05660 PF01966 HD domain JMB28_RS05665 PF00639 PPIC-type PPIASE domain JMB28_RS05680 PF01230 HIT domain JMB28_RS05685 PF00005 ABC transporter JMB28_RS05690 PF05975 Bacterial ABC transporter protein EcsB JMB28_RS05700 PF01208 Uroporphyrinogen decarboxylase (URO-D) JMB28_RS05705 PF00762 Ferrochelatase JMB28_RS05710 PF01593 Flavin containing amine oxidoreductase JMB28_RS05715 PF06821 Serine hydrolase JMB28_RS05785 PF00535 Glycosyl transferase family 2 JMB28_RS05795 PF00501 AMP-binding enzyme JMB28_RS05795 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS05805 PF01809 Putative membrane protein insertion efficiency factor JMB28_RS05815 PF00326 Prolyl oligopeptidase family JMB28_RS05820 PF01293 Phosphoenolpyruvate carboxykinase JMB28_RS05825 PF02773 S-adenosylmethionine synthetase, C-terminal domain JMB28_RS05825 PF00438 S-adenosylmethionine synthetase, N-terminal domain JMB28_RS05825 PF02772 S-adenosylmethionine synthetase, central domain JMB28_RS05835 PF00248 Aldo/keto reductase family JMB28_RS05840 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JMB28_RS05845 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JMB28_RS05855 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMB28_RS05875 PF04542 Sigma-70 region 2 JMB28_RS05875 PF00196 Bacterial regulatory proteins, luxR family JMB28_RS05885 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMB28_RS05885 PF13457 GW (Gly-Tryp) dipeptide domain JMB28_RS05890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JMB28_RS05900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMB28_RS05900 PF01872 RibD C-terminal domain JMB28_RS05905 PF00677 Lumazine binding domain JMB28_RS05910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JMB28_RS05910 PF00925 GTP cyclohydrolase II JMB28_RS05915 PF00885 6,7-dimethyl-8-ribityllumazine synthase JMB28_RS05920 PF01619 Proline dehydrogenase JMB28_RS05925 PF12146 Serine aminopeptidase, S33 JMB28_RS05930 PF00056 lactate/malate dehydrogenase, NAD binding domain JMB28_RS05930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JMB28_RS05935 PF01047 MarR family JMB28_RS05940 PF06962 Putative rRNA methylase JMB28_RS05945 PF16199 Radical_SAM C-terminal domain JMB28_RS05945 PF04055 Radical SAM superfamily JMB28_RS05950 PF07690 Major Facilitator Superfamily JMB28_RS05955 PF09334 tRNA synthetases class I (M) JMB28_RS05955 PF13603 Leucyl-tRNA synthetase, Domain 2 JMB28_RS05955 PF08264 Anticodon-binding domain of tRNA JMB28_RS05955 PF00133 tRNA synthetases class I (I, L, M and V) JMB28_RS05970 PF14667 Polysaccharide biosynthesis C-terminal domain JMB28_RS05970 PF01943 Polysaccharide biosynthesis protein JMB28_RS05975 PF00849 RNA pseudouridylate synthase JMB28_RS05975 PF01479 S4 domain JMB28_RS05985 PF01546 Peptidase family M20/M25/M40 JMB28_RS05990 PF01063 Amino-transferase class IV JMB28_RS05995 PF01636 Phosphotransferase enzyme family JMB28_RS06000 PF02390 Putative methyltransferase JMB28_RS06005 PF00753 Metallo-beta-lactamase superfamily JMB28_RS06015 PF05343 M42 glutamyl aminopeptidase JMB28_RS06020 PF00085 Thioredoxin JMB28_RS06025 PF07285 Protein of unknown function (DUF1444) JMB28_RS06030 PF14794 Domain of unknown function (DUF4479) JMB28_RS06030 PF01588 Putative tRNA binding domain JMB28_RS06035 PF17854 FtsK alpha domain JMB28_RS06035 PF09397 Ftsk gamma domain JMB28_RS06035 PF01580 FtsK/SpoIIIE family JMB28_RS06040 PF02875 Mur ligase family, glutamate ligase domain JMB28_RS06040 PF01225 Mur ligase family, catalytic domain JMB28_RS06040 PF08245 Mur ligase middle domain JMB28_RS06045 PF06103 Bacterial protein of unknown function (DUF948) JMB28_RS06055 PF01817 Chorismate mutase type II JMB28_RS06055 PF00793 DAHP synthetase I family JMB28_RS06060 PF00356 Bacterial regulatory proteins, lacI family JMB28_RS06065 PF00850 Histone deacetylase domain JMB28_RS06070 PF00583 Acetyltransferase (GNAT) family JMB28_RS06075 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS06075 PF00501 AMP-binding enzyme JMB28_RS06080 PF01268 Formate--tetrahydrofolate ligase JMB28_RS06085 PF00912 Transglycosylase JMB28_RS06085 PF00905 Penicillin binding protein transpeptidase domain JMB28_RS06090 PF00579 tRNA synthetases class I (W and Y) JMB28_RS06090 PF01479 S4 domain JMB28_RS06095 PF13180 PDZ domain JMB28_RS06100 PF01553 Acyltransferase JMB28_RS06105 PF02378 Phosphotransferase system, EIIC JMB28_RS06105 PF00367 phosphotransferase system, EIIB JMB28_RS06115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS06115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMB28_RS06115 PF01842 ACT domain JMB28_RS06120 PF00266 Aminotransferase class-V JMB28_RS06125 PF02566 OsmC-like protein JMB28_RS06130 PF03009 Glycerophosphoryl diester phosphodiesterase family JMB28_RS06135 PF13302 Acetyltransferase (GNAT) domain JMB28_RS06140 PF01479 S4 domain JMB28_RS06140 PF00163 Ribosomal protein S4/S9 N-terminal domain JMB28_RS06145 PF13185 GAF domain JMB28_RS06150 PF06160 Septation ring formation regulator, EzrA JMB28_RS06155 PF00266 Aminotransferase class-V JMB28_RS06160 PF02568 Thiamine biosynthesis protein (ThiI) JMB28_RS06160 PF02926 THUMP domain JMB28_RS06165 PF01925 Sulfite exporter TauE/SafE JMB28_RS06170 PF01343 Peptidase family S49 JMB28_RS06175 PF06271 RDD family JMB28_RS06180 PF08534 Redoxin JMB28_RS06185 PF02384 N-6 DNA Methylase JMB28_RS06190 PF00871 Acetokinase family JMB28_RS06200 PF00582 Universal stress protein family JMB28_RS06205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JMB28_RS06205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JMB28_RS06210 PF03932 CutC family JMB28_RS06215 PF00557 Metallopeptidase family M24 JMB28_RS06215 PF01321 Creatinase/Prolidase N-terminal domain JMB28_RS06230 PF07085 DRTGG domain JMB28_RS06230 PF00571 CBS domain JMB28_RS06230 PF03061 Thioesterase superfamily JMB28_RS06230 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS06235 PF02272 DHHA1 domain JMB28_RS06235 PF01368 DHH family JMB28_RS06240 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMB28_RS06240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMB28_RS06240 PF02811 PHP domain JMB28_RS06240 PF01336 OB-fold nucleic acid binding domain JMB28_RS06240 PF14579 Helix-hairpin-helix motif JMB28_RS06245 PF03949 Malic enzyme, NAD binding domain JMB28_RS06245 PF00390 Malic enzyme, N-terminal domain JMB28_RS06250 PF01039 Carboxyl transferase domain JMB28_RS06250 PF17848 Acetyl-coA carboxylase zinc finger domain JMB28_RS06255 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JMB28_RS06260 PF00365 Phosphofructokinase JMB28_RS06265 PF00391 PEP-utilising enzyme, mobile domain JMB28_RS06265 PF00224 Pyruvate kinase, barrel domain JMB28_RS06265 PF02887 Pyruvate kinase, alpha/beta domain JMB28_RS06270 PF00324 Amino acid permease JMB28_RS06275 PF00285 Citrate synthase, C-terminal domain JMB28_RS06280 PF00180 Isocitrate/isopropylmalate dehydrogenase JMB28_RS06285 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS06285 PF00072 Response regulator receiver domain JMB28_RS06290 PF00512 His Kinase A (phospho-acceptor) domain JMB28_RS06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS06290 PF16736 Single Cache-like JMB28_RS06290 PF00989 PAS fold JMB28_RS06295 PF01367 5'-3' exonuclease, C-terminal SAM fold JMB28_RS06295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JMB28_RS06295 PF00476 DNA polymerase family A JMB28_RS06300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JMB28_RS06300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JMB28_RS06300 PF06827 Zinc finger found in FPG and IleRS JMB28_RS06305 PF01121 Dephospho-CoA kinase JMB28_RS06310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JMB28_RS06310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMB28_RS06315 PF03477 ATP cone domain JMB28_RS06325 PF07319 Primosomal protein DnaI N-terminus JMB28_RS06325 PF01695 IstB-like ATP binding protein JMB28_RS06330 PF03129 Anticodon binding domain JMB28_RS06330 PF02824 TGS domain JMB28_RS06330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMB28_RS06330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMB28_RS06335 PF00324 Amino acid permease JMB28_RS06340 PF05198 Translation initiation factor IF-3, N-terminal domain JMB28_RS06340 PF00707 Translation initiation factor IF-3, C-terminal domain JMB28_RS06345 PF01632 Ribosomal protein L35 JMB28_RS06350 PF00453 Ribosomal protein L20 JMB28_RS06365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JMB28_RS06365 PF05698 Bacterial trigger factor protein (TF) C-terminus JMB28_RS06365 PF05697 Bacterial trigger factor protein (TF) JMB28_RS06370 PF10431 C-terminal, D2-small domain, of ClpB protein JMB28_RS06370 PF07724 AAA domain (Cdc48 subfamily) JMB28_RS06370 PF06689 ClpX C4-type zinc finger JMB28_RS06375 PF01926 50S ribosome-binding GTPase JMB28_RS06380 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JMB28_RS06380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JMB28_RS06380 PF01488 Shikimate / quinate 5-dehydrogenase JMB28_RS06385 PF01578 Cytochrome C assembly protein JMB28_RS06390 PF03900 Porphobilinogen deaminase, C-terminal domain JMB28_RS06390 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JMB28_RS06400 PF00490 Delta-aminolevulinic acid dehydratase JMB28_RS06405 PF00202 Aminotransferase class-III JMB28_RS06415 PF03352 Methyladenine glycosylase JMB28_RS06420 PF08264 Anticodon-binding domain of tRNA JMB28_RS06420 PF00133 tRNA synthetases class I (I, L, M and V) JMB28_RS06420 PF10458 Valyl tRNA synthetase tRNA binding arm JMB28_RS06425 PF08245 Mur ligase middle domain JMB28_RS06425 PF02875 Mur ligase family, glutamate ligase domain JMB28_RS06440 PF04002 RadC-like JAB domain JMB28_RS06465 PF04085 rod shape-determining protein MreC JMB28_RS06475 PF00829 Ribosomal prokaryotic L21 protein JMB28_RS06480 PF04327 Cysteine protease Prp JMB28_RS06485 PF01016 Ribosomal L27 protein JMB28_RS06490 PF01926 50S ribosome-binding GTPase JMB28_RS06490 PF09269 Domain of unknown function (DUF1967) JMB28_RS06490 PF01018 GTP1/OBG JMB28_RS06500 PF01330 RuvA N terminal domain JMB28_RS06500 PF07499 RuvA, C-terminal domain JMB28_RS06505 PF17864 RuvB AAA lid domain JMB28_RS06505 PF05491 RuvB C-terminal winged helix domain JMB28_RS06505 PF05496 Holliday junction DNA helicase RuvB P-loop domain JMB28_RS06510 PF02547 Queuosine biosynthesis protein JMB28_RS06515 PF01702 Queuine tRNA-ribosyltransferase JMB28_RS06520 PF02699 Preprotein translocase subunit JMB28_RS06525 PF07549 SecD/SecF GG Motif JMB28_RS06525 PF02355 Protein export membrane protein JMB28_RS06530 PF02272 DHHA1 domain JMB28_RS06530 PF01368 DHH family JMB28_RS06530 PF17768 RecJ OB domain JMB28_RS06530 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JMB28_RS06535 PF00156 Phosphoribosyl transferase domain JMB28_RS06540 PF04607 Region found in RelA / SpoT proteins JMB28_RS06540 PF13291 ACT domain JMB28_RS06540 PF02824 TGS domain JMB28_RS06545 PF02580 D-Tyr-tRNA(Tyr) deacylase JMB28_RS06550 PF01520 N-acetylmuramoyl-L-alanine amidase JMB28_RS06550 PF08239 Bacterial SH3 domain JMB28_RS06555 PF13393 Histidyl-tRNA synthetase JMB28_RS06555 PF03129 Anticodon binding domain JMB28_RS06560 PF01336 OB-fold nucleic acid binding domain JMB28_RS06560 PF00152 tRNA synthetases class II (D, K and N) JMB28_RS06560 PF02938 GAD domain JMB28_RS06570 PF00899 ThiF family JMB28_RS06575 PF16193 AAA C-terminal domain JMB28_RS06575 PF05496 Holliday junction DNA helicase RuvB P-loop domain JMB28_RS06575 PF12002 MgsA AAA+ ATPase C terminal JMB28_RS06580 PF02082 Transcriptional regulator JMB28_RS06595 PF00296 Luciferase-like monooxygenase JMB28_RS06600 PF12848 ABC transporter JMB28_RS06600 PF16326 ABC transporter C-terminal domain JMB28_RS06600 PF00005 ABC transporter JMB28_RS06605 PF00266 Aminotransferase class-V JMB28_RS06620 PF13538 UvrD-like helicase C-terminal domain JMB28_RS06620 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JMB28_RS06620 PF14490 Helix-hairpin-helix containing domain JMB28_RS06625 PF01411 tRNA synthetases class II (A) JMB28_RS06625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMB28_RS06625 PF02272 DHHA1 domain JMB28_RS06630 PF06135 IreB regulatory phosphoprotein JMB28_RS06635 PF03652 Holliday junction resolvase JMB28_RS06640 PF06949 Protein of unknown function (DUF1292) JMB28_RS06645 PF01596 O-methyltransferase JMB28_RS06650 PF01136 Peptidase family U32 JMB28_RS06655 PF16325 Peptidase family U32 C-terminal domain JMB28_RS06655 PF01136 Peptidase family U32 JMB28_RS06660 PF00485 Phosphoribulokinase / Uridine kinase family JMB28_RS06665 PF03449 Transcription elongation factor, N-terminal JMB28_RS06665 PF01272 Transcription elongation factor, GreA/GreB, C-term JMB28_RS06670 PF02682 Carboxyltransferase domain, subdomain C and D JMB28_RS06675 PF02626 Carboxyltransferase domain, subdomain A and B JMB28_RS06685 PF02785 Biotin carboxylase C-terminal domain JMB28_RS06685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMB28_RS06685 PF00289 Biotin carboxylase, N-terminal domain JMB28_RS06690 PF03746 LamB/YcsF family JMB28_RS06695 PF01566 Natural resistance-associated macrophage protein JMB28_RS06700 PF01048 Phosphorylase superfamily JMB28_RS06710 PF01926 50S ribosome-binding GTPase JMB28_RS06715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JMB28_RS06715 PF08501 Shikimate dehydrogenase substrate binding domain JMB28_RS06715 PF01488 Shikimate / quinate 5-dehydrogenase JMB28_RS06720 PF01985 CRS1 / YhbY (CRM) domain JMB28_RS06725 PF01467 Cytidylyltransferase-like JMB28_RS06730 PF01966 HD domain JMB28_RS06740 PF13649 Methyltransferase domain JMB28_RS06750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMB28_RS06755 PF03772 Competence protein JMB28_RS06755 PF13567 Domain of unknown function (DUF4131) JMB28_RS06755 PF00753 Metallo-beta-lactamase superfamily JMB28_RS06760 PF06144 DNA polymerase III, delta subunit JMB28_RS06765 PF01649 Ribosomal protein S20 JMB28_RS06770 PF06421 GTP-binding protein LepA C-terminus JMB28_RS06770 PF03144 Elongation factor Tu domain 2 JMB28_RS06770 PF00009 Elongation factor Tu GTP binding domain JMB28_RS06770 PF14492 Elongation Factor G, domain II JMB28_RS06770 PF00679 Elongation factor G C-terminus JMB28_RS06775 PF04055 Radical SAM superfamily JMB28_RS06775 PF06969 HemN C-terminal domain JMB28_RS06780 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JMB28_RS06780 PF01628 HrcA protein C terminal domain JMB28_RS06785 PF01025 GrpE JMB28_RS06790 PF00012 Hsp70 protein JMB28_RS06795 PF00684 DnaJ central domain JMB28_RS06795 PF01556 DnaJ C terminal domain JMB28_RS06795 PF00226 DnaJ domain JMB28_RS06805 PF04452 RNA methyltransferase JMB28_RS06810 PF01165 Ribosomal protein S21 JMB28_RS06815 PF01972 Serine dehydrogenase proteinase JMB28_RS06815 PF01957 NfeD-like C-terminal, partner-binding JMB28_RS06820 PF12127 SigmaW regulon antibacterial JMB28_RS06830 PF02562 PhoH-like protein JMB28_RS06835 PF02130 Uncharacterized protein family UPF0054 JMB28_RS06840 PF01219 Prokaryotic diacylglycerol kinase JMB28_RS06845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMB28_RS06850 PF01926 50S ribosome-binding GTPase JMB28_RS06850 PF07650 KH domain JMB28_RS06855 PF11967 Recombination protein O N terminal JMB28_RS06855 PF02565 Recombination protein O C terminal JMB28_RS06860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMB28_RS06860 PF03129 Anticodon binding domain JMB28_RS06865 PF08279 HTH domain JMB28_RS06865 PF00571 CBS domain JMB28_RS06870 PF03618 Kinase/pyrophosphorylase JMB28_RS06875 PF01807 CHC2 zinc finger JMB28_RS06875 PF08275 DNA primase catalytic core, N-terminal domain JMB28_RS06875 PF00772 DnaB-like helicase N terminal domain JMB28_RS06880 PF04539 Sigma-70 region 3 JMB28_RS06880 PF04542 Sigma-70 region 2 JMB28_RS06880 PF04545 Sigma-70, region 4 JMB28_RS06880 PF03979 Sigma-70 factor, region 1.1 JMB28_RS06880 PF00140 Sigma-70 factor, region 1.2 JMB28_RS06890 PF01784 NIF3 (NGG1p interacting factor 3) JMB28_RS06895 PF00270 DEAD/DEAH box helicase JMB28_RS06895 PF00271 Helicase conserved C-terminal domain JMB28_RS06900 PF01261 Xylose isomerase-like TIM barrel JMB28_RS06905 PF00005 ABC transporter JMB28_RS06910 PF00950 ABC 3 transport family JMB28_RS06915 PF01475 Ferric uptake regulator family JMB28_RS06920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JMB28_RS06920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JMB28_RS06925 PF00905 Penicillin binding protein transpeptidase domain JMB28_RS06925 PF03717 Penicillin-binding Protein dimerisation domain JMB28_RS06930 PF00471 Ribosomal protein L33 JMB28_RS06935 PF01812 5-formyltetrahydrofolate cyclo-ligase family JMB28_RS06940 PF01694 Rhomboid family JMB28_RS06945 PF06014 Bacterial protein of unknown function (DUF910) JMB28_RS06950 PF00480 ROK family JMB28_RS06955 PF01910 Thiamine-binding protein JMB28_RS06960 PF00753 Metallo-beta-lactamase superfamily JMB28_RS06965 PF00437 Type II/IV secretion system protein JMB28_RS06995 PF01202 Shikimate kinase JMB28_RS07000 PF01571 Aminomethyltransferase folate-binding domain JMB28_RS07000 PF08669 Glycine cleavage T-protein C-terminal barrel domain JMB28_RS07005 PF02347 Glycine cleavage system P-protein JMB28_RS07010 PF00266 Aminotransferase class-V JMB28_RS07015 PF00581 Rhodanese-like domain JMB28_RS07020 PF03099 Biotin/lipoate A/B protein ligase family JMB28_RS07035 PF00557 Metallopeptidase family M24 JMB28_RS07035 PF01321 Creatinase/Prolidase N-terminal domain JMB28_RS07040 PF08207 Elongation factor P (EF-P) KOW-like domain JMB28_RS07040 PF09285 Elongation factor P, C-terminal JMB28_RS07040 PF01132 Elongation factor P (EF-P) OB domain JMB28_RS07045 PF00364 Biotin-requiring enzyme JMB28_RS07050 PF00289 Biotin carboxylase, N-terminal domain JMB28_RS07050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMB28_RS07050 PF02785 Biotin carboxylase C-terminal domain JMB28_RS07055 PF03780 Asp23 family, cell envelope-related function JMB28_RS07060 PF01029 NusB family JMB28_RS07065 PF02601 Exonuclease VII, large subunit JMB28_RS07065 PF13742 OB-fold nucleic acid binding domain JMB28_RS07070 PF02609 Exonuclease VII small subunit JMB28_RS07075 PF00348 Polyprenyl synthetase JMB28_RS07080 PF01316 Arginine repressor, DNA binding domain JMB28_RS07080 PF02863 Arginine repressor, C-terminal domain JMB28_RS07085 PF02463 RecF/RecN/SMC N terminal domain JMB28_RS07090 PF01515 Phosphate acetyl/butaryl transferase JMB28_RS07095 PF00871 Acetokinase family JMB28_RS07100 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS07100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMB28_RS07105 PF00676 Dehydrogenase E1 component JMB28_RS07110 PF02780 Transketolase, C-terminal domain JMB28_RS07110 PF02779 Transketolase, pyrimidine binding domain JMB28_RS07115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JMB28_RS07115 PF02817 e3 binding domain JMB28_RS07115 PF00364 Biotin-requiring enzyme JMB28_RS07120 PF06491 Disulphide isomerase JMB28_RS07125 PF11728 Putative aromatic acid exporter C-terminal domain JMB28_RS07125 PF06081 Aromatic acid exporter family member 1 JMB28_RS07130 PF07687 Peptidase dimerisation domain JMB28_RS07130 PF01546 Peptidase family M20/M25/M40 JMB28_RS07135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JMB28_RS07135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JMB28_RS07140 PF00356 Bacterial regulatory proteins, lacI family JMB28_RS07145 PF16657 Maltogenic Amylase, C-terminal domain JMB28_RS07145 PF00128 Alpha amylase, catalytic domain JMB28_RS07155 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JMB28_RS07155 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JMB28_RS07160 PF12706 Beta-lactamase superfamily domain JMB28_RS07165 PF14748 Pyrroline-5-carboxylate reductase dimerisation JMB28_RS07165 PF03807 NADP oxidoreductase coenzyme F420-dependent JMB28_RS07175 PF00248 Aldo/keto reductase family JMB28_RS07180 PF00293 NUDIX domain JMB28_RS07185 PF01475 Ferric uptake regulator family JMB28_RS07190 PF00589 Phage integrase family JMB28_RS07190 PF02899 Phage integrase, N-terminal SAM-like domain JMB28_RS07200 PF02616 Segregation and condensation protein ScpA JMB28_RS07205 PF04079 Segregation and condensation complex subunit ScpB JMB28_RS07210 PF01479 S4 domain JMB28_RS07210 PF00849 RNA pseudouridylate synthase JMB28_RS07215 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS07215 PF00072 Response regulator receiver domain JMB28_RS07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS07220 PF00672 HAMP domain JMB28_RS07220 PF18698 Histidine kinase sensor domain JMB28_RS07220 PF00512 His Kinase A (phospho-acceptor) domain JMB28_RS07225 PF12822 ECF transporter, substrate-specific component JMB28_RS07245 PF00270 DEAD/DEAH box helicase JMB28_RS07245 PF00271 Helicase conserved C-terminal domain JMB28_RS07250 PF01476 LysM domain JMB28_RS07250 PF01476 LysM domain JMB28_RS07260 PF00710 Asparaginase, N-terminal JMB28_RS07260 PF17763 Glutaminase/Asparaginase C-terminal domain JMB28_RS07265 PF02224 Cytidylate kinase JMB28_RS07270 PF00575 S1 RNA binding domain JMB28_RS07275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JMB28_RS07275 PF01926 50S ribosome-binding GTPase JMB28_RS07280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JMB28_RS07280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JMB28_RS07285 PF00216 Bacterial DNA-binding protein JMB28_RS07295 PF01209 ubiE/COQ5 methyltransferase family JMB28_RS07300 PF00348 Polyprenyl synthetase JMB28_RS07305 PF00334 Nucleoside diphosphate kinase JMB28_RS07310 PF01264 Chorismate synthase JMB28_RS07315 PF01761 3-dehydroquinate synthase JMB28_RS07320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMB28_RS07330 PF08858 IDEAL domain JMB28_RS07330 PF08864 UPF0302 domain JMB28_RS07335 PF07187 Protein of unknown function (DUF1405) JMB28_RS07340 PF04298 Putative neutral zinc metallopeptidase JMB28_RS07345 PF03819 MazG nucleotide pyrophosphohydrolase domain JMB28_RS07350 PF13439 Glycosyltransferase Family 4 JMB28_RS07350 PF00534 Glycosyl transferases group 1 JMB28_RS07355 PF13735 tRNA nucleotidyltransferase domain 2 putative JMB28_RS07355 PF01743 Poly A polymerase head domain JMB28_RS07355 PF12627 Probable RNA and SrmB- binding site of polymerase A JMB28_RS07360 PF02237 Biotin protein ligase C terminal domain JMB28_RS07360 PF03099 Biotin/lipoate A/B protein ligase family JMB28_RS07360 PF08279 HTH domain JMB28_RS07365 PF13307 Helicase C-terminal domain JMB28_RS07365 PF04851 Type III restriction enzyme, res subunit JMB28_RS07365 PF00929 Exonuclease JMB28_RS07370 PF01336 OB-fold nucleic acid binding domain JMB28_RS07370 PF00152 tRNA synthetases class II (D, K and N) JMB28_RS07375 PF07261 Replication initiation and membrane attachment JMB28_RS07380 PF00633 Helix-hairpin-helix motif JMB28_RS07380 PF10576 Iron-sulfur binding domain of endonuclease III JMB28_RS07380 PF00730 HhH-GPD superfamily base excision DNA repair protein JMB28_RS07390 PF00912 Transglycosylase JMB28_RS07390 PF00905 Penicillin binding protein transpeptidase domain JMB28_RS07395 PF03838 Recombination protein U JMB28_RS07405 PF06908 YspA SLOG family JMB28_RS07410 PF05103 DivIVA protein JMB28_RS07420 PF01170 Putative RNA methylase family UPF0020 JMB28_RS07420 PF02926 THUMP domain JMB28_RS07425 PF00892 EamA-like transporter family JMB28_RS07435 PF00350 Dynamin family JMB28_RS07440 PF01367 5'-3' exonuclease, C-terminal SAM fold JMB28_RS07440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JMB28_RS07445 PF13456 Reverse transcriptase-like JMB28_RS07450 PF06821 Serine hydrolase JMB28_RS07455 PF02592 Putative vitamin uptake transporter JMB28_RS07465 PF08712 Scaffold protein Nfu/NifU N terminal JMB28_RS07465 PF13769 Virulence factor JMB28_RS07470 PF13769 Virulence factor JMB28_RS07470 PF08712 Scaffold protein Nfu/NifU N terminal JMB28_RS07475 PF06491 Disulphide isomerase JMB28_RS07480 PF00303 Thymidylate synthase JMB28_RS07485 PF00186 Dihydrofolate reductase JMB28_RS07490 PF02645 Uncharacterised protein, DegV family COG1307 JMB28_RS07500 PF01641 SelR domain JMB28_RS07505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMB28_RS07510 PF06855 YozE SAM-like fold JMB28_RS07515 PF01471 Putative peptidoglycan binding domain JMB28_RS07515 PF17820 PDZ domain JMB28_RS07515 PF03572 Peptidase family S41 JMB28_RS07525 PF04101 Glycosyltransferase family 28 C-terminal domain JMB28_RS07525 PF03033 Glycosyltransferase family 28 N-terminal domain JMB28_RS07530 PF01569 PAP2 superfamily JMB28_RS07535 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS07535 PF00072 Response regulator receiver domain JMB28_RS07540 PF18719 ArlS sensor domain JMB28_RS07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS07540 PF00512 His Kinase A (phospho-acceptor) domain JMB28_RS07545 PF02779 Transketolase, pyrimidine binding domain JMB28_RS07545 PF00676 Dehydrogenase E1 component JMB28_RS07545 PF16870 2-oxoglutarate dehydrogenase C-terminal JMB28_RS07550 PF02817 e3 binding domain JMB28_RS07550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JMB28_RS07550 PF00364 Biotin-requiring enzyme JMB28_RS07555 PF02040 Arsenical pump membrane protein JMB28_RS07565 PF12833 Helix-turn-helix domain JMB28_RS07565 PF02311 AraC-like ligand binding domain JMB28_RS07580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS07580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS07585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS07585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS07595 PF00005 ABC transporter JMB28_RS07620 PF07728 AAA domain (dynein-related subfamily) JMB28_RS07620 PF08406 CbbQ/NirQ/NorQ C-terminal JMB28_RS07625 PF00092 von Willebrand factor type A domain JMB28_RS07630 PF05525 Branched-chain amino acid transport protein JMB28_RS07635 PF02028 BCCT, betaine/carnitine/choline family transporter JMB28_RS07640 PF05816 Toxic anion resistance protein (TelA) JMB28_RS07650 PF00708 Acylphosphatase JMB28_RS07660 PF00313 'Cold-shock' DNA-binding domain JMB28_RS07665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JMB28_RS07665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JMB28_RS07670 PF01168 Alanine racemase, N-terminal domain JMB28_RS07670 PF00842 Alanine racemase, C-terminal domain JMB28_RS07675 PF01546 Peptidase family M20/M25/M40 JMB28_RS07680 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JMB28_RS07680 PF00132 Bacterial transferase hexapeptide (six repeats) JMB28_RS07680 PF14602 Hexapeptide repeat of succinyl-transferase JMB28_RS07685 PF05173 Dihydrodipicolinate reductase, C-terminus JMB28_RS07685 PF01113 Dihydrodipicolinate reductase, N-terminus JMB28_RS07690 PF00701 Dihydrodipicolinate synthetase family JMB28_RS07695 PF01118 Semialdehyde dehydrogenase, NAD binding domain JMB28_RS07695 PF02774 Semialdehyde dehydrogenase, dimerisation domain JMB28_RS07700 PF13840 ACT domain JMB28_RS07700 PF01842 ACT domain JMB28_RS07700 PF00696 Amino acid kinase family JMB28_RS07705 PF00248 Aldo/keto reductase family JMB28_RS07710 PF00005 ABC transporter JMB28_RS07710 PF12848 ABC transporter JMB28_RS07715 PF13509 S1 domain JMB28_RS07715 PF17783 CvfB-like winged helix domain JMB28_RS07720 PF12849 PBP superfamily domain JMB28_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS07735 PF00005 ABC transporter JMB28_RS07740 PF01895 PhoU domain JMB28_RS07745 PF08439 Oligopeptidase F JMB28_RS07745 PF01432 Peptidase family M3 JMB28_RS07755 PF01497 Periplasmic binding protein JMB28_RS07765 PF02388 FemAB family JMB28_RS07770 PF02388 FemAB family JMB28_RS07780 PF00290 Tryptophan synthase alpha chain JMB28_RS07785 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS07790 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JMB28_RS07795 PF00218 Indole-3-glycerol phosphate synthase JMB28_RS07800 PF00591 Glycosyl transferase family, a/b domain JMB28_RS07805 PF00117 Glutamine amidotransferase class-I JMB28_RS07810 PF04715 Anthranilate synthase component I, N terminal region JMB28_RS07810 PF00425 chorismate binding enzyme JMB28_RS07825 PF01810 LysE type translocator JMB28_RS07835 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS07835 PF00535 Glycosyl transferase family 2 JMB28_RS07840 PF00535 Glycosyl transferase family 2 JMB28_RS07855 PF05343 M42 glutamyl aminopeptidase JMB28_RS07860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS07865 PF02153 Prephenate dehydrogenase JMB28_RS07865 PF01842 ACT domain JMB28_RS07870 PF00817 impB/mucB/samB family JMB28_RS07870 PF11798 IMS family HHH motif JMB28_RS07870 PF11799 impB/mucB/samB family C-terminal domain JMB28_RS07875 PF01361 Tautomerase enzyme JMB28_RS07885 PF03816 Cell envelope-related transcriptional attenuator domain JMB28_RS07890 PF01625 Peptide methionine sulfoxide reductase JMB28_RS07895 PF13407 Periplasmic binding protein domain JMB28_RS07905 PF00005 ABC transporter JMB28_RS07910 PF05025 RbsD / FucU transport protein family JMB28_RS07915 PF00356 Bacterial regulatory proteins, lacI family JMB28_RS07920 PF03706 Lysylphosphatidylglycerol synthase TM region JMB28_RS07920 PF09924 Uncharacterised conserved protein (DUF2156) JMB28_RS07925 PF01594 AI-2E family transporter JMB28_RS07935 PF03123 CAT RNA binding domain JMB28_RS07935 PF00874 PRD domain JMB28_RS07940 PF01235 Sodium:alanine symporter family JMB28_RS07945 PF00521 DNA gyrase/topoisomerase IV, subunit A JMB28_RS07945 PF03989 DNA gyrase C-terminal domain, beta-propeller JMB28_RS07950 PF00986 DNA gyrase B subunit, carboxyl terminus JMB28_RS07950 PF00204 DNA gyrase B JMB28_RS07950 PF01751 Toprim domain JMB28_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS07955 PF02660 Glycerol-3-phosphate acyltransferase JMB28_RS07965 PF03061 Thioesterase superfamily JMB28_RS07970 PF00694 Aconitase C-terminal domain JMB28_RS07970 PF00330 Aconitase family (aconitate hydratase) JMB28_RS07975 PF02028 BCCT, betaine/carnitine/choline family transporter JMB28_RS07980 PF01741 Large-conductance mechanosensitive channel, MscL JMB28_RS07985 PF13476 AAA domain JMB28_RS07990 PF00149 Calcineurin-like phosphoesterase JMB28_RS07990 PF12320 Type 5 capsule protein repressor C-terminal domain JMB28_RS07995 PF07301 Protein of unknown function (DUF1453) JMB28_RS08005 PF03672 Uncharacterised protein family (UPF0154) JMB28_RS08010 PF02780 Transketolase, C-terminal domain JMB28_RS08010 PF00456 Transketolase, thiamine diphosphate binding domain JMB28_RS08010 PF02779 Transketolase, pyrimidine binding domain JMB28_RS08025 PF01726 LexA DNA binding domain JMB28_RS08025 PF00717 Peptidase S24-like JMB28_RS08035 PF00478 IMP dehydrogenase / GMP reductase domain JMB28_RS08040 PF00253 Ribosomal protein S14p/S29e JMB28_RS08045 PF00471 Ribosomal protein L33 JMB28_RS08050 PF00199 Catalase JMB28_RS08050 PF06628 Catalase-related immune-responsive JMB28_RS08055 PF00324 Amino acid permease JMB28_RS08075 PF00288 GHMP kinases N terminal domain JMB28_RS08075 PF08544 GHMP kinases C terminal JMB28_RS08080 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS08085 PF01842 ACT domain JMB28_RS08085 PF00742 Homoserine dehydrogenase JMB28_RS08085 PF03447 Homoserine dehydrogenase, NAD binding domain JMB28_RS08090 PF00696 Amino acid kinase family JMB28_RS08090 PF13840 ACT domain JMB28_RS08110 PF00565 Staphylococcal nuclease homologue JMB28_RS08120 PF00072 Response regulator receiver domain JMB28_RS08120 PF00196 Bacterial regulatory proteins, luxR family JMB28_RS08125 PF07730 Histidine kinase JMB28_RS08135 PF00005 ABC transporter JMB28_RS08140 PF12833 Helix-turn-helix domain JMB28_RS08140 PF06445 GyrI-like small molecule binding domain JMB28_RS08150 PF02566 OsmC-like protein JMB28_RS08160 PF00120 Glutamine synthetase, catalytic domain JMB28_RS08160 PF03951 Glutamine synthetase, beta-Grasp domain JMB28_RS08165 PF13411 MerR HTH family regulatory protein JMB28_RS08170 PF06838 Methionine gamma-lyase JMB28_RS08175 PF13167 GTP-binding GTPase N-terminal JMB28_RS08175 PF16360 GTP-binding GTPase Middle Region JMB28_RS08175 PF01926 50S ribosome-binding GTPase JMB28_RS08180 PF00255 Glutathione peroxidase JMB28_RS08185 PF17209 Hfq protein JMB28_RS08200 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JMB28_RS08200 PF01266 FAD dependent oxidoreductase JMB28_RS08205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS08205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS08210 PF00230 Major intrinsic protein JMB28_RS08215 PF02016 LD-carboxypeptidase N-terminal domain JMB28_RS08215 PF17676 LD-carboxypeptidase C-terminal domain JMB28_RS08225 PF01119 DNA mismatch repair protein, C-terminal domain JMB28_RS08225 PF08676 MutL C terminal dimerisation domain JMB28_RS08230 PF05192 MutS domain III JMB28_RS08230 PF05190 MutS family domain IV JMB28_RS08230 PF00488 MutS domain V JMB28_RS08230 PF05188 MutS domain II JMB28_RS08230 PF01624 MutS domain I JMB28_RS08240 PF06133 Control of competence regulator ComK, YlbF/YmcA JMB28_RS08245 PF04055 Radical SAM superfamily JMB28_RS08245 PF00919 Uncharacterized protein family UPF0004 JMB28_RS08245 PF01938 TRAM domain JMB28_RS08250 PF01910 Thiamine-binding protein JMB28_RS08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS08260 PF02082 Transcriptional regulator JMB28_RS08265 PF05908 Poly-gamma-glutamate hydrolase JMB28_RS08275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMB28_RS08280 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JMB28_RS08280 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JMB28_RS08280 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JMB28_RS08285 PF13277 YmdB-like protein JMB28_RS08295 PF00013 KH domain JMB28_RS08295 PF12072 Domain of unknown function (DUF3552) JMB28_RS08295 PF01966 HD domain JMB28_RS08300 PF00154 recA bacterial DNA recombination protein JMB28_RS08305 PF02464 Competence-damaged protein JMB28_RS08305 PF18146 Damage-inducible protein CinA KH domain JMB28_RS08305 PF00994 Probable molybdopterin binding domain JMB28_RS08310 PF01066 CDP-alcohol phosphatidyltransferase JMB28_RS08320 PF11868 Protein of unknown function (DUF3388) JMB28_RS08330 PF05193 Peptidase M16 inactive domain JMB28_RS08330 PF00675 Insulinase (Peptidase family M16) JMB28_RS08335 PF05193 Peptidase M16 inactive domain JMB28_RS08340 PF07702 UTRA domain JMB28_RS08340 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS08345 PF01580 FtsK/SpoIIIE family JMB28_RS08345 PF17854 FtsK alpha domain JMB28_RS08345 PF09397 Ftsk gamma domain JMB28_RS08350 PF17770 Ribonuclease J C-terminal domain JMB28_RS08350 PF00753 Metallo-beta-lactamase superfamily JMB28_RS08350 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JMB28_RS08355 PF01138 3' exoribonuclease family, domain 1 JMB28_RS08355 PF03725 3' exoribonuclease family, domain 2 JMB28_RS08355 PF00013 KH domain JMB28_RS08355 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JMB28_RS08355 PF00575 S1 RNA binding domain JMB28_RS08360 PF00312 Ribosomal protein S15 JMB28_RS08365 PF01687 Riboflavin kinase JMB28_RS08365 PF06574 FAD synthetase JMB28_RS08370 PF01509 TruB family pseudouridylate synthase (N terminal domain) JMB28_RS08370 PF16198 tRNA pseudouridylate synthase B C-terminal domain JMB28_RS08375 PF02033 Ribosome-binding factor A JMB28_RS08390 PF11987 Translation-initiation factor 2 JMB28_RS08390 PF04760 Translation initiation factor IF-2, N-terminal region JMB28_RS08390 PF00009 Elongation factor Tu GTP binding domain JMB28_RS08395 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JMB28_RS08400 PF04296 Protein of unknown function (DUF448) JMB28_RS08405 PF13184 NusA-like KH domain JMB28_RS08405 PF00575 S1 RNA binding domain JMB28_RS08405 PF08529 NusA N-terminal domain JMB28_RS08410 PF17384 RimP C-terminal SH3 domain JMB28_RS08410 PF02576 RimP N-terminal domain JMB28_RS08415 PF02811 PHP domain JMB28_RS08415 PF14480 DNA polymerase III polC-type N-terminus I JMB28_RS08415 PF00929 Exonuclease JMB28_RS08415 PF11490 DNA polymerase III polC-type N-terminus II JMB28_RS08415 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMB28_RS08415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMB28_RS08415 PF14579 Helix-hairpin-helix motif JMB28_RS08420 PF03129 Anticodon binding domain JMB28_RS08420 PF04073 Aminoacyl-tRNA editing domain JMB28_RS08420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMB28_RS08425 PF02163 Peptidase family M50 JMB28_RS08425 PF13180 PDZ domain JMB28_RS08435 PF01255 Putative undecaprenyl diphosphate synthase JMB28_RS08440 PF01765 Ribosome recycling factor JMB28_RS08445 PF00696 Amino acid kinase family JMB28_RS08450 PF00889 Elongation factor TS JMB28_RS08460 PF06018 CodY GAF-like domain JMB28_RS08460 PF08222 CodY helix-turn-helix domain JMB28_RS08465 PF10431 C-terminal, D2-small domain, of ClpB protein JMB28_RS08465 PF00004 ATPase family associated with various cellular activities (AAA) JMB28_RS08465 PF07724 AAA domain (Cdc48 subfamily) JMB28_RS08470 PF00227 Proteasome subunit JMB28_RS08475 PF02899 Phage integrase, N-terminal SAM-like domain JMB28_RS08475 PF00589 Phage integrase family JMB28_RS08480 PF01134 Glucose inhibited division protein A JMB28_RS08485 PF01396 Topoisomerase DNA binding C4 zinc finger JMB28_RS08485 PF01131 DNA topoisomerase JMB28_RS08485 PF01751 Toprim domain JMB28_RS08490 PF02481 DNA recombination-mediator protein A JMB28_RS08490 PF18255 DNA processing protein A sterile alpha motif domain JMB28_RS08495 PF00549 CoA-ligase JMB28_RS08495 PF02629 CoA binding domain JMB28_RS08500 PF00549 CoA-ligase JMB28_RS08500 PF08442 ATP-grasp domain JMB28_RS08505 PF01351 Ribonuclease HII JMB28_RS08510 PF01926 50S ribosome-binding GTPase JMB28_RS08515 PF09586 Bacterial membrane protein YfhO JMB28_RS08525 PF01245 Ribosomal protein L19 JMB28_RS08530 PF01746 tRNA (Guanine-1)-methyltransferase JMB28_RS08535 PF01782 RimM N-terminal domain JMB28_RS08535 PF05239 PRC-barrel domain JMB28_RS08540 PF00886 Ribosomal protein S16 JMB28_RS08550 PF00296 Luciferase-like monooxygenase JMB28_RS08555 PF02978 Signal peptide binding domain JMB28_RS08555 PF02881 SRP54-type protein, helical bundle domain JMB28_RS08555 PF00448 SRP54-type protein, GTPase domain JMB28_RS08560 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JMB28_RS08565 PF00448 SRP54-type protein, GTPase domain JMB28_RS08565 PF02881 SRP54-type protein, helical bundle domain JMB28_RS08570 PF02463 RecF/RecN/SMC N terminal domain JMB28_RS08570 PF06470 SMC proteins Flexible Hinge Domain JMB28_RS08575 PF14622 Ribonuclease-III-like JMB28_RS08575 PF00035 Double-stranded RNA binding motif JMB28_RS08580 PF00550 Phosphopantetheine attachment site JMB28_RS08590 PF00698 Acyl transferase domain JMB28_RS08595 PF02504 Fatty acid synthesis protein JMB28_RS08605 PF01447 Thermolysin metallopeptidase, catalytic domain JMB28_RS08605 PF07504 Fungalysin/Thermolysin Propeptide Motif JMB28_RS08605 PF02868 Thermolysin metallopeptidase, alpha-helical domain JMB28_RS08605 PF03413 Peptidase propeptide and YPEB domain JMB28_RS08610 PF00271 Helicase conserved C-terminal domain JMB28_RS08610 PF00270 DEAD/DEAH box helicase JMB28_RS08610 PF17191 RecG wedge domain JMB28_RS08615 PF03313 Serine dehydratase alpha chain JMB28_RS08620 PF03315 Serine dehydratase beta chain JMB28_RS08620 PF01842 ACT domain JMB28_RS08625 PF13684 Dihydroxyacetone kinase family JMB28_RS08625 PF02734 DAK2 domain JMB28_RS08630 PF03780 Asp23 family, cell envelope-related function JMB28_RS08635 PF00830 Ribosomal L28 family JMB28_RS08640 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JMB28_RS08640 PF04263 Thiamin pyrophosphokinase, catalytic domain JMB28_RS08645 PF00834 Ribulose-phosphate 3 epimerase family JMB28_RS08650 PF16745 RsgA N-terminal domain JMB28_RS08650 PF03193 RsgA GTPase JMB28_RS08655 PF00069 Protein kinase domain JMB28_RS08655 PF03793 PASTA domain JMB28_RS08665 PF04055 Radical SAM superfamily JMB28_RS08670 PF01029 NusB family JMB28_RS08670 PF01189 16S rRNA methyltransferase RsmB/F JMB28_RS08675 PF02911 Formyl transferase, C-terminal domain JMB28_RS08675 PF00551 Formyl transferase JMB28_RS08680 PF01327 Polypeptide deformylase JMB28_RS08695 PF01497 Periplasmic binding protein JMB28_RS08700 PF17764 3′ DNA-binding domain (3′BD) JMB28_RS08700 PF04851 Type III restriction enzyme, res subunit JMB28_RS08700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JMB28_RS08700 PF18074 Primosomal protein N C-terminal domain JMB28_RS08700 PF00271 Helicase conserved C-terminal domain JMB28_RS08705 PF02441 Flavoprotein JMB28_RS08705 PF04127 DNA / pantothenate metabolism flavoprotein JMB28_RS08710 PF01192 RNA polymerase Rpb6 JMB28_RS08715 PF00625 Guanylate kinase JMB28_RS08720 PF05670 NFACT protein RNA binding domain JMB28_RS08735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMB28_RS08735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMB28_RS08740 PF01636 Phosphotransferase enzyme family JMB28_RS08750 PF00156 Phosphoribosyl transferase domain JMB28_RS08755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JMB28_RS08760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMB28_RS08760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JMB28_RS08760 PF02142 MGS-like domain JMB28_RS08765 PF00117 Glutamine amidotransferase class-I JMB28_RS08765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JMB28_RS08770 PF01979 Amidohydrolase family JMB28_RS08775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JMB28_RS08775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JMB28_RS08780 PF00860 Permease family JMB28_RS08785 PF00156 Phosphoribosyl transferase domain JMB28_RS08790 PF01479 S4 domain JMB28_RS08790 PF00849 RNA pseudouridylate synthase JMB28_RS08795 PF01252 Signal peptidase (SPase) II JMB28_RS08805 PF08264 Anticodon-binding domain of tRNA JMB28_RS08805 PF00133 tRNA synthetases class I (I, L, M and V) JMB28_RS08805 PF06827 Zinc finger found in FPG and IleRS JMB28_RS08810 PF05103 DivIVA protein JMB28_RS08820 PF02325 YGGT family JMB28_RS08825 PF04472 Cell division protein SepF JMB28_RS08830 PF01168 Alanine racemase, N-terminal domain JMB28_RS08835 PF02578 Multi-copper polyphenol oxidoreductase laccase JMB28_RS08840 PF00091 Tubulin/FtsZ family, GTPase domain JMB28_RS08840 PF12327 FtsZ family, C-terminal domain JMB28_RS08845 PF02491 SHS2 domain inserted in FTSA JMB28_RS08850 PF08478 POTRA domain, FtsQ-type JMB28_RS08850 PF03799 Cell division protein FtsQ JMB28_RS08855 PF08245 Mur ligase middle domain JMB28_RS08855 PF02875 Mur ligase family, glutamate ligase domain JMB28_RS08860 PF00953 Glycosyl transferase family 4 JMB28_RS08865 PF03793 PASTA domain JMB28_RS08865 PF00905 Penicillin binding protein transpeptidase domain JMB28_RS08865 PF03717 Penicillin-binding Protein dimerisation domain JMB28_RS08870 PF04977 Septum formation initiator JMB28_RS08875 PF01795 MraW methylase family JMB28_RS08880 PF02381 MraZ protein, putative antitoxin-like JMB28_RS08885 PF10079 Bacillithiol biosynthesis BshC JMB28_RS08890 PF13673 Acetyltransferase (GNAT) domain JMB28_RS08895 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS08900 PF05480 Staphylococcus haemolytic protein JMB28_RS08910 PF05480 Staphylococcus haemolytic protein JMB28_RS08915 PF00535 Glycosyl transferase family 2 JMB28_RS08915 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JMB28_RS08950 PF01725 Ham1 family JMB28_RS08955 PF01177 Asp/Glu/Hydantoin racemase JMB28_RS08960 PF13183 4Fe-4S dicluster domain JMB28_RS08960 PF13085 2Fe-2S iron-sulfur cluster binding domain JMB28_RS08965 PF02910 Fumarate reductase flavoprotein C-term JMB28_RS08965 PF00890 FAD binding domain JMB28_RS08970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JMB28_RS08975 PF01541 GIY-YIG catalytic domain JMB28_RS08975 PF02151 UvrB/uvrC motif JMB28_RS08975 PF08459 UvrC Helix-hairpin-helix N-terminal JMB28_RS08980 PF00085 Thioredoxin JMB28_RS08985 PF01713 Smr domain JMB28_RS08985 PF00488 MutS domain V JMB28_RS08990 PF14791 DNA polymerase beta thumb JMB28_RS08990 PF14716 Helix-hairpin-helix domain JMB28_RS08990 PF02811 PHP domain JMB28_RS09000 PF05164 Cell division protein ZapA JMB28_RS09005 PF11858 Domain of unknown function (DUF3378) JMB28_RS09005 PF01351 Ribonuclease HII JMB28_RS09010 PF03483 B3/4 domain JMB28_RS09010 PF03484 tRNA synthetase B5 domain JMB28_RS09010 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JMB28_RS09010 PF01588 Putative tRNA binding domain JMB28_RS09010 PF03147 Ferredoxin-fold anticodon binding domain JMB28_RS09015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JMB28_RS09015 PF01409 tRNA synthetases class II core domain (F) JMB28_RS09020 PF08032 RNA 2'-O ribose methyltransferase substrate binding JMB28_RS09020 PF00588 SpoU rRNA Methylase family JMB28_RS09030 PF01783 Ribosomal L32p protein family JMB28_RS09040 PF05636 HIGH Nucleotidyl Transferase JMB28_RS09045 PF01467 Cytidylyltransferase-like JMB28_RS09060 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JMB28_RS09065 PF03009 Glycerophosphoryl diester phosphodiesterase family JMB28_RS09070 PF06133 Control of competence regulator ComK, YlbF/YmcA JMB28_RS09080 PF17760 UvrA interaction domain JMB28_RS09080 PF17755 UvrA DNA-binding domain JMB28_RS09090 PF01040 UbiA prenyltransferase family JMB28_RS09095 PF02628 Cytochrome oxidase assembly protein JMB28_RS09100 PF00289 Biotin carboxylase, N-terminal domain JMB28_RS09100 PF02785 Biotin carboxylase C-terminal domain JMB28_RS09100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMB28_RS09100 PF02436 Conserved carboxylase domain JMB28_RS09100 PF00682 HMGL-like JMB28_RS09100 PF00364 Biotin-requiring enzyme JMB28_RS09105 PF01098 Cell cycle protein JMB28_RS09115 PF07408 Protein of unknown function (DUF1507) JMB28_RS09125 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JMB28_RS09130 PF03144 Elongation factor Tu domain 2 JMB28_RS09130 PF00679 Elongation factor G C-terminus JMB28_RS09130 PF00009 Elongation factor Tu GTP binding domain JMB28_RS09130 PF14492 Elongation Factor G, domain II JMB28_RS09140 PF00459 Inositol monophosphatase family JMB28_RS09145 PF06335 Protein of unknown function (DUF1054) JMB28_RS09160 PF01566 Natural resistance-associated macrophage protein JMB28_RS09170 PF13416 Bacterial extracellular solute-binding protein JMB28_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS09180 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS09185 PF00005 ABC transporter JMB28_RS09185 PF08402 TOBE domain JMB28_RS09195 PF05256 Uncharacterised protein family (UPF0223) JMB28_RS09200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMB28_RS09200 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS09205 PF02817 e3 binding domain JMB28_RS09205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JMB28_RS09205 PF00364 Biotin-requiring enzyme JMB28_RS09210 PF02779 Transketolase, pyrimidine binding domain JMB28_RS09210 PF02780 Transketolase, C-terminal domain JMB28_RS09215 PF00676 Dehydrogenase E1 component JMB28_RS09225 PF01327 Polypeptide deformylase JMB28_RS09235 PF07288 Protein of unknown function (DUF1447) JMB28_RS09245 PF02254 TrkA-N domain JMB28_RS09245 PF02080 TrkA-C domain JMB28_RS09250 PF02322 Cytochrome bd terminal oxidase subunit II JMB28_RS09255 PF01654 Cytochrome bd terminal oxidase subunit I JMB28_RS09265 PF05524 PEP-utilising enzyme, N-terminal JMB28_RS09265 PF00391 PEP-utilising enzyme, mobile domain JMB28_RS09265 PF02896 PEP-utilising enzyme, TIM barrel domain JMB28_RS09270 PF00381 PTS HPr component phosphorylation site JMB28_RS09280 PF17785 PUA-like domain JMB28_RS09280 PF10672 S-adenosylmethionine-dependent methyltransferase JMB28_RS09300 PF00005 ABC transporter JMB28_RS09310 PF02843 Phosphoribosylglycinamide synthetase, C domain JMB28_RS09310 PF02844 Phosphoribosylglycinamide synthetase, N domain JMB28_RS09310 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JMB28_RS09315 PF02142 MGS-like domain JMB28_RS09315 PF01808 AICARFT/IMPCHase bienzyme JMB28_RS09320 PF00551 Formyl transferase JMB28_RS09325 PF00586 AIR synthase related protein, N-terminal domain JMB28_RS09325 PF02769 AIR synthase related protein, C-terminal domain JMB28_RS09330 PF00156 Phosphoribosyl transferase domain JMB28_RS09330 PF13537 Glutamine amidotransferase domain JMB28_RS09335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JMB28_RS09335 PF02769 AIR synthase related protein, C-terminal domain JMB28_RS09335 PF00586 AIR synthase related protein, N-terminal domain JMB28_RS09345 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JMB28_RS09350 PF01259 SAICAR synthetase JMB28_RS09355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS09355 PF02222 ATP-grasp domain JMB28_RS09355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JMB28_RS09360 PF00731 AIR carboxylase JMB28_RS09365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JMB28_RS09365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JMB28_RS09370 PF00970 Oxidoreductase FAD-binding domain JMB28_RS09370 PF00175 Oxidoreductase NAD-binding domain JMB28_RS09370 PF00042 Globin JMB28_RS09380 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JMB28_RS09380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JMB28_RS09385 PF00115 Cytochrome C and Quinol oxidase polypeptide I JMB28_RS09390 PF00510 Cytochrome c oxidase subunit III JMB28_RS09395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JMB28_RS09400 PF01156 Inosine-uridine preferring nucleoside hydrolase JMB28_RS09405 PF00144 Beta-lactamase JMB28_RS09410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMB28_RS09410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMB28_RS09410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMB28_RS09410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMB28_RS09415 PF03816 Cell envelope-related transcriptional attenuator domain JMB28_RS09420 PF10804 Protein of unknown function (DUF2538) JMB28_RS09425 PF13673 Acetyltransferase (GNAT) domain JMB28_RS09430 PF01510 N-acetylmuramoyl-L-alanine amidase JMB28_RS09430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMB28_RS09430 PF13457 GW (Gly-Tryp) dipeptide domain JMB28_RS09430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMB28_RS09430 PF01510 N-acetylmuramoyl-L-alanine amidase JMB28_RS09430 PF13457 GW (Gly-Tryp) dipeptide domain JMB28_RS09440 PF01757 Acyltransferase family JMB28_RS09445 PF00155 Aminotransferase class I and II JMB28_RS09450 PF01047 MarR family JMB28_RS09455 PF00378 Enoyl-CoA hydratase/isomerase JMB28_RS09460 PF00561 alpha/beta hydrolase fold JMB28_RS09465 PF16582 Middle domain of thiamine pyrophosphate JMB28_RS09465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JMB28_RS09470 PF00425 chorismate binding enzyme JMB28_RS09475 PF01040 UbiA prenyltransferase family JMB28_RS09485 PF05154 TM2 domain JMB28_RS09510 PF06338 ComK protein JMB28_RS09520 PF10437 Bacterial lipoate protein ligase C-terminus JMB28_RS09520 PF03099 Biotin/lipoate A/B protein ligase family JMB28_RS09525 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JMB28_RS09535 PF02872 5'-nucleotidase, C-terminal domain JMB28_RS09535 PF00149 Calcineurin-like phosphoesterase JMB28_RS09540 PF02386 Cation transport protein JMB28_RS09545 PF13180 PDZ domain JMB28_RS09550 PF01566 Natural resistance-associated macrophage protein JMB28_RS09550 PF03358 NADPH-dependent FMN reductase JMB28_RS09555 PF03860 Domain of Unknown Function (DUF326) JMB28_RS09565 PF00171 Aldehyde dehydrogenase family JMB28_RS09570 PF00067 Cytochrome P450 JMB28_RS09575 PF03741 Integral membrane protein TerC family JMB28_RS09580 PF16658 Class II release factor RF3, C-terminal domain JMB28_RS09580 PF03144 Elongation factor Tu domain 2 JMB28_RS09580 PF00009 Elongation factor Tu GTP binding domain JMB28_RS09590 PF01225 Mur ligase family, catalytic domain JMB28_RS09590 PF02875 Mur ligase family, glutamate ligase domain JMB28_RS09590 PF08245 Mur ligase middle domain JMB28_RS09595 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JMB28_RS09595 PF04101 Glycosyltransferase family 28 C-terminal domain JMB28_RS09600 PF07690 Major Facilitator Superfamily JMB28_RS09610 PF00756 Putative esterase JMB28_RS09615 PF01235 Sodium:alanine symporter family JMB28_RS09620 PF01594 AI-2E family transporter JMB28_RS09635 PF00999 Sodium/hydrogen exchanger family JMB28_RS09635 PF02080 TrkA-C domain JMB28_RS09635 PF02254 TrkA-N domain JMB28_RS09640 PF00571 CBS domain JMB28_RS09640 PF01769 Divalent cation transporter JMB28_RS09640 PF03448 MgtE intracellular N domain JMB28_RS09645 PF00849 RNA pseudouridylate synthase JMB28_RS09650 PF01513 ATP-NAD kinase JMB28_RS09655 PF04607 Region found in RelA / SpoT proteins JMB28_RS09670 PF01152 Bacterial-like globin JMB28_RS09680 PF01432 Peptidase family M3 JMB28_RS09680 PF08439 Oligopeptidase F JMB28_RS09690 PF05389 Negative regulator of genetic competence (MecA) JMB28_RS09695 PF03960 ArsC family JMB28_RS09700 PF00579 tRNA synthetases class I (W and Y) JMB28_RS09705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMB28_RS09710 PF00005 ABC transporter JMB28_RS09710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMB28_RS09720 PF12911 N-terminal TM domain of oligopeptide transport permease C JMB28_RS09720 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS09725 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS09740 PF02801 Beta-ketoacyl synthase, C-terminal domain JMB28_RS09740 PF00109 Beta-ketoacyl synthase, N-terminal domain JMB28_RS09745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JMB28_RS09745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JMB28_RS09755 PF07724 AAA domain (Cdc48 subfamily) JMB28_RS09755 PF10431 C-terminal, D2-small domain, of ClpB protein JMB28_RS09755 PF02861 Clp amino terminal domain, pathogenicity island component JMB28_RS09755 PF17871 AAA lid domain JMB28_RS09755 PF00004 ATPase family associated with various cellular activities (AAA) JMB28_RS09770 PF01757 Acyltransferase family JMB28_RS09775 PF01883 Iron-sulfur cluster assembly protein JMB28_RS09785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMB28_RS09785 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS09800 PF07457 Protein of unknown function (DUF1516) JMB28_RS09805 PF01557 Fumarylacetoacetate (FAA) hydrolase family JMB28_RS09810 PF04235 Protein of unknown function (DUF418) JMB28_RS09815 PF12705 PD-(D/E)XK nuclease superfamily JMB28_RS09815 PF00580 UvrD/REP helicase N-terminal domain JMB28_RS09815 PF13361 UvrD-like helicase C-terminal domain JMB28_RS09820 PF13361 UvrD-like helicase C-terminal domain JMB28_RS09820 PF12705 PD-(D/E)XK nuclease superfamily JMB28_RS09825 PF10502 Signal peptidase, peptidase S26 JMB28_RS09830 PF10502 Signal peptidase, peptidase S26 JMB28_RS09835 PF09335 SNARE associated Golgi protein JMB28_RS09840 PF00342 Phosphoglucose isomerase JMB28_RS09845 PF00764 Arginosuccinate synthase JMB28_RS09850 PF14698 Argininosuccinate lyase C-terminal JMB28_RS09850 PF00206 Lyase JMB28_RS09855 PF03009 Glycerophosphoryl diester phosphodiesterase family JMB28_RS09860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JMB28_RS09860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JMB28_RS09865 PF00202 Aminotransferase class-III JMB28_RS09870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMB28_RS09875 PF00575 S1 RNA binding domain JMB28_RS09880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JMB28_RS09890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JMB28_RS09890 PF13244 Domain of unknown function (DUF4040) JMB28_RS09890 PF00361 Proton-conducting membrane transporter JMB28_RS09895 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JMB28_RS09900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JMB28_RS09905 PF00361 Proton-conducting membrane transporter JMB28_RS09910 PF01899 Na+/H+ ion antiporter subunit JMB28_RS09915 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JMB28_RS09920 PF03334 Na+/H+ antiporter subunit JMB28_RS09930 PF03061 Thioesterase superfamily JMB28_RS09935 PF03553 Na+/H+ antiporter family JMB28_RS09935 PF13726 Na+-H+ antiporter family JMB28_RS09940 PF02789 Cytosol aminopeptidase family, N-terminal domain JMB28_RS09940 PF00883 Cytosol aminopeptidase family, catalytic domain JMB28_RS09945 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS09950 PF01521 Iron-sulphur cluster biosynthesis JMB28_RS09955 PF07293 Protein of unknown function (DUF1450) JMB28_RS09960 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS09965 PF07315 Protein of unknown function (DUF1462) JMB28_RS09970 PF01106 NifU-like domain JMB28_RS09975 PF04914 DltD protein JMB28_RS09980 PF00550 Phosphopantetheine attachment site JMB28_RS09985 PF03062 MBOAT, membrane-bound O-acyltransferase family JMB28_RS09990 PF00501 AMP-binding enzyme JMB28_RS09990 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS10000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMB28_RS10000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS10005 PF13344 Haloacid dehalogenase-like hydrolase JMB28_RS10010 PF01934 Protein of unknown function DUF86 JMB28_RS10020 PF06265 Protein of unknown function (DUF1027) JMB28_RS10025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JMB28_RS10025 PF04055 Radical SAM superfamily JMB28_RS10030 PF02872 5'-nucleotidase, C-terminal domain JMB28_RS10035 PF01925 Sulfite exporter TauE/SafE JMB28_RS10040 PF01904 Protein of unknown function DUF72 JMB28_RS10045 PF03060 Nitronate monooxygenase JMB28_RS10050 PF00571 CBS domain JMB28_RS10050 PF01595 Cyclin M transmembrane N-terminal domain JMB28_RS10050 PF03471 Transporter associated domain JMB28_RS10055 PF00583 Acetyltransferase (GNAT) family JMB28_RS10060 PF01458 Uncharacterized protein family (UPF0051) JMB28_RS10065 PF01592 NifU-like N terminal domain JMB28_RS10070 PF00266 Aminotransferase class-V JMB28_RS10075 PF01458 Uncharacterized protein family (UPF0051) JMB28_RS10080 PF00005 ABC transporter JMB28_RS10090 PF01595 Cyclin M transmembrane N-terminal domain JMB28_RS10090 PF03471 Transporter associated domain JMB28_RS10090 PF00571 CBS domain JMB28_RS10170 PF03180 NLPA lipoprotein JMB28_RS10175 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS10180 PF00005 ABC transporter JMB28_RS10180 PF09383 NIL domain JMB28_RS10185 PF00085 Thioredoxin JMB28_RS10190 PF01751 Toprim domain JMB28_RS10195 PF01597 Glycine cleavage H-protein JMB28_RS10200 PF03960 ArsC family JMB28_RS10205 PF00085 Thioredoxin JMB28_RS10210 PF00881 Nitroreductase family JMB28_RS10215 PF01487 Type I 3-dehydroquinase JMB28_RS10220 PF02566 OsmC-like protein JMB28_RS10235 PF03600 Citrate transporter JMB28_RS10250 PF05154 TM2 domain JMB28_RS10290 PF13673 Acetyltransferase (GNAT) domain JMB28_RS10295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS10310 PF12146 Serine aminopeptidase, S33 JMB28_RS10340 PF01022 Bacterial regulatory protein, arsR family JMB28_RS10350 PF01476 LysM domain JMB28_RS10350 PF05257 CHAP domain JMB28_RS10360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS10385 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS10450 PF01668 SmpB protein JMB28_RS10455 PF17876 Cold shock domain JMB28_RS10455 PF00773 RNB domain JMB28_RS10455 PF00575 S1 RNA binding domain JMB28_RS10455 PF08206 Ribonuclease B OB domain JMB28_RS10460 PF12146 Serine aminopeptidase, S33 JMB28_RS10465 PF03840 Preprotein translocase SecG subunit JMB28_RS10475 PF03952 Enolase, N-terminal domain JMB28_RS10475 PF00113 Enolase, C-terminal TIM barrel domain JMB28_RS10480 PF01676 Metalloenzyme superfamily JMB28_RS10480 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JMB28_RS10485 PF00121 Triosephosphate isomerase JMB28_RS10490 PF00162 Phosphoglycerate kinase JMB28_RS10495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMB28_RS10495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JMB28_RS10500 PF04198 Putative sugar-binding domain JMB28_RS10525 PF08338 Domain of unknown function (DUF1731) JMB28_RS10525 PF01370 NAD dependent epimerase/dehydratase family JMB28_RS10535 PF00574 Clp protease JMB28_RS10545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMB28_RS10545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMB28_RS10550 PF14527 WhiA LAGLIDADG-like domain JMB28_RS10550 PF10298 WhiA N-terminal LAGLIDADG-like domain JMB28_RS10550 PF02650 WhiA C-terminal HTH domain JMB28_RS10555 PF01933 Uncharacterised protein family UPF0052 JMB28_RS10560 PF03668 P-loop ATPase protein family JMB28_RS10565 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS10575 PF14602 Hexapeptide repeat of succinyl-transferase JMB28_RS10580 PF01790 Prolipoprotein diacylglyceryl transferase JMB28_RS10585 PF07475 HPr Serine kinase C-terminal domain JMB28_RS10585 PF02603 HPr Serine kinase N terminus JMB28_RS10590 PF00005 ABC transporter JMB28_RS10590 PF17755 UvrA DNA-binding domain JMB28_RS10590 PF17760 UvrA interaction domain JMB28_RS10595 PF12344 Ultra-violet resistance protein B JMB28_RS10595 PF17757 UvrB interaction domain JMB28_RS10595 PF00271 Helicase conserved C-terminal domain JMB28_RS10595 PF04851 Type III restriction enzyme, res subunit JMB28_RS10595 PF02151 UvrB/uvrC motif JMB28_RS10610 PF05257 CHAP domain JMB28_RS10610 PF01476 LysM domain JMB28_RS10620 PF07517 SecA DEAD-like domain JMB28_RS10620 PF02810 SEC-C motif JMB28_RS10620 PF07516 SecA Wing and Scaffold domain JMB28_RS10620 PF01043 SecA preprotein cross-linking domain JMB28_RS10625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JMB28_RS10625 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JMB28_RS10635 PF04851 Type III restriction enzyme, res subunit JMB28_RS10635 PF00271 Helicase conserved C-terminal domain JMB28_RS10640 PF02645 Uncharacterised protein, DegV family COG1307 JMB28_RS10645 PF09186 Domain of unknown function (DUF1949) JMB28_RS10645 PF01205 Uncharacterized protein family UPF0029 JMB28_RS10650 PF00953 Glycosyl transferase family 4 JMB28_RS10655 PF00990 Diguanylate cyclase, GGDEF domain JMB28_RS10655 PF07694 5TMR of 5TMR-LYT JMB28_RS10670 PF01546 Peptidase family M20/M25/M40 JMB28_RS10670 PF07687 Peptidase dimerisation domain JMB28_RS10680 PF02595 Glycerate kinase family JMB28_RS10700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JMB28_RS10700 PF01565 FAD binding domain JMB28_RS10715 PF01497 Periplasmic binding protein JMB28_RS10720 PF00005 ABC transporter JMB28_RS10725 PF01032 FecCD transport family JMB28_RS10730 PF01032 FecCD transport family JMB28_RS10735 PF00268 Ribonucleotide reductase, small chain JMB28_RS10740 PF08343 Ribonucleotide reductase N-terminal JMB28_RS10740 PF00317 Ribonucleotide reductase, all-alpha domain JMB28_RS10740 PF02867 Ribonucleotide reductase, barrel domain JMB28_RS10745 PF07972 NrdI Flavodoxin like JMB28_RS10755 PF14489 QueF-like protein JMB28_RS10760 PF00854 POT family JMB28_RS10765 PF00854 POT family JMB28_RS10770 PF00781 Diacylglycerol kinase catalytic domain JMB28_RS10775 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JMB28_RS10780 PF00155 Aminotransferase class I and II JMB28_RS10785 PF00528 Binding-protein-dependent transport system inner membrane component JMB28_RS10790 PF00005 ABC transporter JMB28_RS10790 PF00571 CBS domain JMB28_RS10795 PF00570 HRDC domain JMB28_RS10795 PF09382 RQC domain JMB28_RS10795 PF16124 RecQ zinc-binding JMB28_RS10795 PF00271 Helicase conserved C-terminal domain JMB28_RS10795 PF00270 DEAD/DEAH box helicase JMB28_RS10800 PF12848 ABC transporter JMB28_RS10800 PF16326 ABC transporter C-terminal domain JMB28_RS10800 PF00005 ABC transporter JMB28_RS10805 PF02535 ZIP Zinc transporter JMB28_RS10810 PF00884 Sulfatase JMB28_RS10820 PF02682 Carboxyltransferase domain, subdomain C and D JMB28_RS10830 PF04715 Anthranilate synthase component I, N terminal region JMB28_RS10830 PF00425 chorismate binding enzyme JMB28_RS10835 PF00591 Glycosyl transferase family, a/b domain JMB28_RS10835 PF00117 Glutamine amidotransferase class-I JMB28_RS10835 PF02885 Glycosyl transferase family, helical bundle domain JMB28_RS10840 PF06508 Queuosine biosynthesis protein QueC JMB28_RS10845 PF01242 6-pyruvoyl tetrahydropterin synthase JMB28_RS10850 PF04055 Radical SAM superfamily JMB28_RS10865 PF00535 Glycosyl transferase family 2 JMB28_RS10870 PF00248 Aldo/keto reductase family JMB28_RS10875 PF00571 CBS domain JMB28_RS10875 PF03471 Transporter associated domain JMB28_RS10875 PF01595 Cyclin M transmembrane N-terminal domain JMB28_RS10880 PF01979 Amidohydrolase family JMB28_RS10885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMB28_RS10885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMB28_RS10890 PF00294 pfkB family carbohydrate kinase JMB28_RS10895 PF00455 DeoR C terminal sensor domain JMB28_RS10895 PF08220 DeoR-like helix-turn-helix domain JMB28_RS10900 PF04073 Aminoacyl-tRNA editing domain JMB28_RS10905 PF00483 Nucleotidyl transferase JMB28_RS10915 PF07690 Major Facilitator Superfamily JMB28_RS10930 PF00056 lactate/malate dehydrogenase, NAD binding domain JMB28_RS10930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JMB28_RS10935 PF09335 SNARE associated Golgi protein JMB28_RS10945 PF00248 Aldo/keto reductase family JMB28_RS10950 PF02492 CobW/HypB/UreG, nucleotide-binding domain JMB28_RS10950 PF07683 Cobalamin synthesis protein cobW C-terminal domain JMB28_RS10955 PF01047 MarR family JMB28_RS10960 PF00664 ABC transporter transmembrane region JMB28_RS10960 PF00005 ABC transporter JMB28_RS10965 PF00664 ABC transporter transmembrane region JMB28_RS10965 PF00005 ABC transporter JMB28_RS10970 PF02673 Bacitracin resistance protein BacA JMB28_RS10980 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JMB28_RS10985 PF03641 Possible lysine decarboxylase JMB28_RS10990 PF01810 LysE type translocator JMB28_RS10995 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS10995 PF00155 Aminotransferase class I and II JMB28_RS11030 PF07690 Major Facilitator Superfamily JMB28_RS11035 PF04306 Protein of unknown function (DUF456) JMB28_RS11040 PF07690 Major Facilitator Superfamily JMB28_RS11045 PF03466 LysR substrate binding domain JMB28_RS11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS11055 PF01717 Cobalamin-independent synthase, Catalytic domain JMB28_RS11065 PF01709 Transcriptional regulator JMB28_RS11085 PF01476 LysM domain JMB28_RS11085 PF05257 CHAP domain JMB28_RS11090 PF01384 Phosphate transporter family JMB28_RS11095 PF01865 Protein of unknown function DUF47 JMB28_RS11100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS11105 PF00486 Transcriptional regulatory protein, C terminal JMB28_RS11105 PF00072 Response regulator receiver domain JMB28_RS11110 PF01370 NAD dependent epimerase/dehydratase family JMB28_RS11120 PF07859 alpha/beta hydrolase fold JMB28_RS11135 PF03610 PTS system fructose IIA component JMB28_RS11140 PF02734 DAK2 domain JMB28_RS11145 PF02733 Dak1 domain JMB28_RS11150 PF01032 FecCD transport family JMB28_RS11155 PF01032 FecCD transport family JMB28_RS11160 PF00005 ABC transporter JMB28_RS11165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMB28_RS11165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMB28_RS11170 PF07662 Na+ dependent nucleoside transporter C-terminus JMB28_RS11170 PF01773 Na+ dependent nucleoside transporter N-terminus JMB28_RS11175 PF00664 ABC transporter transmembrane region JMB28_RS11175 PF00005 ABC transporter JMB28_RS11180 PF07943 Penicillin-binding protein 5, C-terminal domain JMB28_RS11180 PF00768 D-alanyl-D-alanine carboxypeptidase JMB28_RS11185 PF01467 Cytidylyltransferase-like JMB28_RS11190 PF00535 Glycosyl transferase family 2 JMB28_RS11195 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS11200 PF01061 ABC-2 type transporter JMB28_RS11205 PF00005 ABC transporter JMB28_RS11210 PF03808 Glycosyl transferase WecB/TagA/CpsF family JMB28_RS11230 PF12706 Beta-lactamase superfamily domain JMB28_RS11235 PF01037 Lrp/AsnC ligand binding domain JMB28_RS11240 PF01325 Iron dependent repressor, N-terminal DNA binding domain JMB28_RS11240 PF02742 Iron dependent repressor, metal binding and dimerisation domain JMB28_RS11245 PF00005 ABC transporter JMB28_RS11250 PF00950 ABC 3 transport family JMB28_RS11255 PF01297 Zinc-uptake complex component A periplasmic JMB28_RS11260 PF00999 Sodium/hydrogen exchanger family JMB28_RS11265 PF03334 Na+/H+ antiporter subunit JMB28_RS11270 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JMB28_RS11275 PF01899 Na+/H+ ion antiporter subunit JMB28_RS11280 PF00361 Proton-conducting membrane transporter JMB28_RS11285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JMB28_RS11290 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JMB28_RS11295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JMB28_RS11295 PF13244 Domain of unknown function (DUF4040) JMB28_RS11295 PF00361 Proton-conducting membrane transporter JMB28_RS11300 PF00589 Phage integrase family JMB28_RS11300 PF02899 Phage integrase, N-terminal SAM-like domain JMB28_RS11335 PF00561 alpha/beta hydrolase fold JMB28_RS11350 PF00561 alpha/beta hydrolase fold JMB28_RS11355 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS11360 PF01032 FecCD transport family JMB28_RS11365 PF01497 Periplasmic binding protein JMB28_RS11375 PF03485 Arginyl tRNA synthetase N terminal domain JMB28_RS11375 PF05746 DALR anticodon binding domain JMB28_RS11375 PF00750 tRNA synthetases class I (R) JMB28_RS11385 PF08741 YwhD family JMB28_RS11390 PF01966 HD domain JMB28_RS11400 PF03358 NADPH-dependent FMN reductase JMB28_RS11405 PF00248 Aldo/keto reductase family JMB28_RS11410 PF07293 Protein of unknown function (DUF1450) JMB28_RS11415 PF01261 Xylose isomerase-like TIM barrel JMB28_RS11420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS11420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS11430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMB28_RS11430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMB28_RS11435 PF01380 SIS domain JMB28_RS11435 PF01418 Helix-turn-helix domain, rpiR family JMB28_RS11440 PF00367 phosphotransferase system, EIIB JMB28_RS11440 PF02378 Phosphotransferase system, EIIC JMB28_RS11445 PF08544 GHMP kinases C terminal JMB28_RS11445 PF00288 GHMP kinases N terminal domain JMB28_RS11455 PF00288 GHMP kinases N terminal domain JMB28_RS11460 PF03099 Biotin/lipoate A/B protein ligase family JMB28_RS11465 PF01515 Phosphate acetyl/butaryl transferase JMB28_RS11470 PF06778 Chlorite dismutase JMB28_RS11490 PF04241 Protein of unknown function (DUF423) JMB28_RS11500 PF03167 Uracil DNA glycosylase superfamily JMB28_RS11505 PF08543 Phosphomethylpyrimidine kinase JMB28_RS11510 PF17412 Family of unknown function JMB28_RS11520 PF07690 Major Facilitator Superfamily JMB28_RS11535 PF00108 Thiolase, N-terminal domain JMB28_RS11535 PF02803 Thiolase, C-terminal domain JMB28_RS11540 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS11540 PF00501 AMP-binding enzyme JMB28_RS11545 PF03949 Malic enzyme, NAD binding domain JMB28_RS11545 PF00390 Malic enzyme, N-terminal domain JMB28_RS11550 PF03390 2-hydroxycarboxylate transporter family JMB28_RS11555 PF02567 Phenazine biosynthesis-like protein JMB28_RS11585 PF04304 Protein of unknown function (DUF454) JMB28_RS11590 PF00072 Response regulator receiver domain JMB28_RS11595 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JMB28_RS11595 PF17203 Single cache domain 3 JMB28_RS11595 PF00989 PAS fold JMB28_RS11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMB28_RS11600 PF01380 SIS domain JMB28_RS11605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JMB28_RS11610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JMB28_RS11620 PF02585 GlcNAc-PI de-N-acetylase JMB28_RS11625 PF02649 Type I GTP cyclohydrolase folE2 JMB28_RS11640 PF03358 NADPH-dependent FMN reductase JMB28_RS11650 PF14437 MafB19-like deaminase JMB28_RS11655 PF01712 Deoxynucleoside kinase JMB28_RS11660 PF01712 Deoxynucleoside kinase JMB28_RS11670 PF13419 Haloacid dehalogenase-like hydrolase JMB28_RS11685 PF01063 Amino-transferase class IV JMB28_RS11690 PF01370 NAD dependent epimerase/dehydratase family JMB28_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS11700 PF03466 LysR substrate binding domain JMB28_RS11705 PF07690 Major Facilitator Superfamily JMB28_RS11710 PF00296 Luciferase-like monooxygenase JMB28_RS11730 PF03737 Aldolase/RraA JMB28_RS11740 PF03831 PhnA domain JMB28_RS11740 PF08274 PhnA Zinc-Ribbon JMB28_RS11745 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JMB28_RS11750 PF00324 Amino acid permease JMB28_RS11755 PF00487 Fatty acid desaturase JMB28_RS11760 PF02986 Fibronectin binding repeat JMB28_RS11760 PF17961 Bacterial Ig domain JMB28_RS11760 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JMB28_RS11760 PF17961 Bacterial Ig domain JMB28_RS11760 PF00746 LPXTG cell wall anchor motif JMB28_RS11760 PF04650 YSIRK type signal peptide JMB28_RS11760 PF02986 Fibronectin binding repeat JMB28_RS11760 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JMB28_RS11760 PF00746 LPXTG cell wall anchor motif JMB28_RS11760 PF04650 YSIRK type signal peptide JMB28_RS11770 PF02574 Homocysteine S-methyltransferase JMB28_RS11775 PF00324 Amino acid permease JMB28_RS11780 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JMB28_RS11780 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JMB28_RS11785 PF00491 Arginase family JMB28_RS11790 PF01566 Natural resistance-associated macrophage protein JMB28_RS11800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMB28_RS11800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMB28_RS11805 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS11805 PF00107 Zinc-binding dehydrogenase JMB28_RS11810 PF07690 Major Facilitator Superfamily JMB28_RS11815 PF08220 DeoR-like helix-turn-helix domain JMB28_RS11815 PF00455 DeoR C terminal sensor domain JMB28_RS11820 PF00005 ABC transporter JMB28_RS11820 PF00664 ABC transporter transmembrane region JMB28_RS11825 PF00106 short chain dehydrogenase JMB28_RS11830 PF03786 D-mannonate dehydratase (UxuA) JMB28_RS11835 PF02614 Glucuronate isomerase JMB28_RS11840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JMB28_RS11850 PF03480 Bacterial extracellular solute-binding protein, family 7 JMB28_RS11855 PF00294 pfkB family carbohydrate kinase JMB28_RS11870 PF03466 LysR substrate binding domain JMB28_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS11875 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JMB28_RS11885 PF00248 Aldo/keto reductase family JMB28_RS11890 PF08803 Putative mono-oxygenase ydhR JMB28_RS11910 PF02796 Helix-turn-helix domain of resolvase JMB28_RS11910 PF00239 Resolvase, N terminal domain JMB28_RS11915 PF03129 Anticodon binding domain JMB28_RS11915 PF02824 TGS domain JMB28_RS11915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMB28_RS11915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMB28_RS11945 PF00768 D-alanyl-D-alanine carboxypeptidase JMB28_RS11945 PF07943 Penicillin-binding protein 5, C-terminal domain JMB28_RS11950 PF02423 Ornithine cyclodeaminase/mu-crystallin family JMB28_RS11965 PF01144 Coenzyme A transferase JMB28_RS11970 PF01144 Coenzyme A transferase JMB28_RS11980 PF00535 Glycosyl transferase family 2 JMB28_RS11980 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS12005 PF00155 Aminotransferase class I and II JMB28_RS12010 PF07687 Peptidase dimerisation domain JMB28_RS12010 PF01546 Peptidase family M20/M25/M40 JMB28_RS12015 PF03143 Elongation factor Tu C-terminal domain JMB28_RS12015 PF03144 Elongation factor Tu domain 2 JMB28_RS12015 PF00009 Elongation factor Tu GTP binding domain JMB28_RS12020 PF00679 Elongation factor G C-terminus JMB28_RS12020 PF03144 Elongation factor Tu domain 2 JMB28_RS12020 PF00009 Elongation factor Tu GTP binding domain JMB28_RS12020 PF14492 Elongation Factor G, domain II JMB28_RS12020 PF03764 Elongation factor G, domain IV JMB28_RS12025 PF00177 Ribosomal protein S7p/S5e JMB28_RS12030 PF00164 Ribosomal protein S12/S23 JMB28_RS12035 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JMB28_RS12040 PF00623 RNA polymerase Rpb1, domain 2 JMB28_RS12040 PF04997 RNA polymerase Rpb1, domain 1 JMB28_RS12040 PF05000 RNA polymerase Rpb1, domain 4 JMB28_RS12040 PF04998 RNA polymerase Rpb1, domain 5 JMB28_RS12040 PF04983 RNA polymerase Rpb1, domain 3 JMB28_RS12045 PF04565 RNA polymerase Rpb2, domain 3 JMB28_RS12045 PF04561 RNA polymerase Rpb2, domain 2 JMB28_RS12045 PF10385 RNA polymerase beta subunit external 1 domain JMB28_RS12045 PF00562 RNA polymerase Rpb2, domain 6 JMB28_RS12045 PF04560 RNA polymerase Rpb2, domain 7 JMB28_RS12045 PF04563 RNA polymerase beta subunit JMB28_RS12050 PF05175 Methyltransferase small domain JMB28_RS12055 PF16320 Ribosomal protein L7/L12 dimerisation domain JMB28_RS12055 PF00542 Ribosomal protein L7/L12 C-terminal domain JMB28_RS12060 PF00466 Ribosomal protein L10 JMB28_RS12065 PF00687 Ribosomal protein L1p/L10e family JMB28_RS12070 PF03946 Ribosomal protein L11, N-terminal domain JMB28_RS12070 PF00298 Ribosomal protein L11, RNA binding domain JMB28_RS12075 PF00467 KOW motif JMB28_RS12075 PF02357 Transcription termination factor nusG JMB28_RS12080 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JMB28_RS12085 PF00471 Ribosomal protein L33 JMB28_RS12100 PF08032 RNA 2'-O ribose methyltransferase substrate binding JMB28_RS12100 PF00588 SpoU rRNA Methylase family JMB28_RS12105 PF00636 Ribonuclease III domain JMB28_RS12110 PF01406 tRNA synthetases class I (C) catalytic domain JMB28_RS12110 PF09190 DALR domain JMB28_RS12115 PF00132 Bacterial transferase hexapeptide (six repeats) JMB28_RS12120 PF00749 tRNA synthetases class I (E and Q), catalytic domain JMB28_RS12130 PF18073 Rubredoxin metal binding domain JMB28_RS12135 PF10431 C-terminal, D2-small domain, of ClpB protein JMB28_RS12135 PF07724 AAA domain (Cdc48 subfamily) JMB28_RS12135 PF00004 ATPase family associated with various cellular activities (AAA) JMB28_RS12135 PF02861 Clp amino terminal domain, pathogenicity island component JMB28_RS12135 PF17871 AAA lid domain JMB28_RS12140 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JMB28_RS12145 PF02151 UvrB/uvrC motif JMB28_RS12150 PF05848 CtsR N-terminal HTH domain JMB28_RS12150 PF17727 CtsR C-terminal dimerization domain JMB28_RS12155 PF01773 Na+ dependent nucleoside transporter N-terminus JMB28_RS12155 PF07662 Na+ dependent nucleoside transporter C-terminus JMB28_RS12160 PF01174 SNO glutamine amidotransferase family JMB28_RS12165 PF01680 SOR/SNZ family JMB28_RS12170 PF00155 Aminotransferase class I and II JMB28_RS12170 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS12255 PF00152 tRNA synthetases class II (D, K and N) JMB28_RS12255 PF01336 OB-fold nucleic acid binding domain JMB28_RS12260 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JMB28_RS12265 PF02152 Dihydroneopterin aldolase JMB28_RS12270 PF00809 Pterin binding enzyme JMB28_RS12275 PF00291 Pyridoxal-phosphate dependent enzyme JMB28_RS12280 PF01430 Hsp33 protein JMB28_RS12285 PF01434 Peptidase family M41 JMB28_RS12285 PF06480 FtsH Extracellular JMB28_RS12285 PF17862 AAA+ lid domain JMB28_RS12285 PF00004 ATPase family associated with various cellular activities (AAA) JMB28_RS12290 PF00156 Phosphoribosyl transferase domain JMB28_RS12295 PF11734 TilS substrate C-terminal domain JMB28_RS12295 PF01171 PP-loop family JMB28_RS12300 PF00575 S1 RNA binding domain JMB28_RS12310 PF01479 S4 domain JMB28_RS12315 PF03819 MazG nucleotide pyrophosphohydrolase domain JMB28_RS12315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMB28_RS12320 PF01943 Polysaccharide biosynthesis protein JMB28_RS12320 PF14667 Polysaccharide biosynthesis C-terminal domain JMB28_RS12325 PF17757 UvrB interaction domain JMB28_RS12325 PF03461 TRCF domain JMB28_RS12325 PF00271 Helicase conserved C-terminal domain JMB28_RS12325 PF00270 DEAD/DEAH box helicase JMB28_RS12325 PF02559 CarD-like/TRCF domain JMB28_RS12330 PF01195 Peptidyl-tRNA hydrolase JMB28_RS12335 PF01386 Ribosomal L25p family JMB28_RS12335 PF14693 Ribosomal protein TL5, C-terminal domain JMB28_RS12340 PF14572 Phosphoribosyl synthetase-associated domain JMB28_RS12340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JMB28_RS12345 PF00132 Bacterial transferase hexapeptide (six repeats) JMB28_RS12345 PF00483 Nucleotidyl transferase JMB28_RS12350 PF04026 SpoVG JMB28_RS12355 PF01042 Endoribonuclease L-PSP JMB28_RS12360 PF09182 Bacterial purine repressor, N-terminal JMB28_RS12360 PF00156 Phosphoribosyl transferase domain JMB28_RS12365 PF00288 GHMP kinases N terminal domain JMB28_RS12365 PF08544 GHMP kinases C terminal JMB28_RS12370 PF06257 Biofilm formation stimulator VEG JMB28_RS12375 PF00398 Ribosomal RNA adenine dimethylase JMB28_RS12380 PF01751 Toprim domain JMB28_RS12380 PF13331 Domain of unknown function (DUF4093) JMB28_RS12385 PF01026 TatD related DNase JMB28_RS12390 PF08264 Anticodon-binding domain of tRNA JMB28_RS12390 PF09334 tRNA synthetases class I (M) JMB28_RS12390 PF01588 Putative tRNA binding domain JMB28_RS12395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMB28_RS12400 PF01541 GIY-YIG catalytic domain JMB28_RS12405 PF05175 Methyltransferase small domain JMB28_RS12410 PF06156 Initiation control protein YabA JMB28_RS12415 PF04468 PSP1 C-terminal conserved region JMB28_RS12420 PF09115 DNA polymerase III, delta subunit, C terminal JMB28_RS12425 PF06153 Cyclic-di-AMP receptor JMB28_RS12430 PF02223 Thymidylate kinase JMB28_RS12435 PF01276 Orn/Lys/Arg decarboxylase, major domain JMB28_RS12435 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JMB28_RS12470 PF02132 RecR protein JMB28_RS12470 PF13662 Toprim domain JMB28_RS12475 PF02575 YbaB/EbfC DNA-binding family JMB28_RS12480 PF12169 DNA polymerase III subunits gamma and tau domain III JMB28_RS12485 PF00583 Acetyltransferase (GNAT) family JMB28_RS12495 PF00392 Bacterial regulatory proteins, gntR family JMB28_RS12495 PF07702 UTRA domain JMB28_RS12500 PF00128 Alpha amylase, catalytic domain JMB28_RS12500 PF16657 Maltogenic Amylase, C-terminal domain JMB28_RS12505 PF02378 Phosphotransferase system, EIIC JMB28_RS12505 PF00367 phosphotransferase system, EIIB JMB28_RS12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS12515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JMB28_RS12520 PF00310 Glutamine amidotransferases class-II JMB28_RS12520 PF04898 Glutamate synthase central domain JMB28_RS12520 PF01645 Conserved region in glutamate synthase JMB28_RS12520 PF01493 GXGXG motif JMB28_RS12540 PF00909 Ammonium Transporter Family JMB28_RS12545 PF00293 NUDIX domain JMB28_RS12555 PF01476 LysM domain JMB28_RS12555 PF05257 CHAP domain JMB28_RS12565 PF00920 Dehydratase family JMB28_RS12575 PF04650 YSIRK type signal peptide JMB28_RS12580 PF00209 Sodium:neurotransmitter symporter family JMB28_RS12585 PF05525 Branched-chain amino acid transport protein JMB28_RS12590 PF08818 Domain of unknown function (DU1801) JMB28_RS12595 PF01145 SPFH domain / Band 7 family JMB28_RS12595 PF15975 Flotillin JMB28_RS12605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JMB28_RS12605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JMB28_RS12620 PF13411 MerR HTH family regulatory protein JMB28_RS12625 PF12146 Serine aminopeptidase, S33 JMB28_RS12635 PF05908 Poly-gamma-glutamate hydrolase JMB28_RS12640 PF00266 Aminotransferase class-V JMB28_RS12645 PF07690 Major Facilitator Superfamily JMB28_RS12650 PF00696 Amino acid kinase family JMB28_RS12660 PF06545 Protein of unknown function (DUF1116) JMB28_RS12665 PF02629 CoA binding domain JMB28_RS12665 PF00549 CoA-ligase JMB28_RS12670 PF02615 Malate/L-lactate dehydrogenase JMB28_RS12675 PF02615 Malate/L-lactate dehydrogenase JMB28_RS12680 PF07883 Cupin domain JMB28_RS12680 PF05899 Protein of unknown function (DUF861) JMB28_RS12685 PF01546 Peptidase family M20/M25/M40 JMB28_RS12695 PF07687 Peptidase dimerisation domain JMB28_RS12695 PF01546 Peptidase family M20/M25/M40 JMB28_RS12700 PF00300 Histidine phosphatase superfamily (branch 1) JMB28_RS12710 PF04542 Sigma-70 region 2 JMB28_RS12710 PF08281 Sigma-70, region 4 JMB28_RS12720 PF02875 Mur ligase family, glutamate ligase domain JMB28_RS12720 PF01225 Mur ligase family, catalytic domain JMB28_RS12720 PF08245 Mur ligase middle domain JMB28_RS12730 PF02557 D-alanyl-D-alanine carboxypeptidase JMB28_RS12735 PF00199 Catalase JMB28_RS12735 PF06628 Catalase-related immune-responsive JMB28_RS12745 PF01979 Amidohydrolase family JMB28_RS12750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JMB28_RS12755 PF07905 Purine catabolism regulatory protein-like family JMB28_RS12755 PF13556 PucR C-terminal helix-turn-helix domain JMB28_RS12755 PF17853 GGDEF-like domain JMB28_RS12760 PF13673 Acetyltransferase (GNAT) domain JMB28_RS12760 PF04229 GrpB protein JMB28_RS12765 PF07690 Major Facilitator Superfamily JMB28_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS12770 PF03466 LysR substrate binding domain JMB28_RS12775 PF07690 Major Facilitator Superfamily JMB28_RS12780 PF00313 'Cold-shock' DNA-binding domain JMB28_RS12795 PF00375 Sodium:dicarboxylate symporter family JMB28_RS12835 PF00958 GMP synthase C terminal domain JMB28_RS12835 PF00117 Glutamine amidotransferase class-I JMB28_RS12840 PF00571 CBS domain JMB28_RS12840 PF00478 IMP dehydrogenase / GMP reductase domain JMB28_RS12845 PF00860 Permease family JMB28_RS12850 PF00156 Phosphoribosyl transferase domain JMB28_RS12855 PF11181 Heat induced stress protein YflT JMB28_RS12870 PF00375 Sodium:dicarboxylate symporter family JMB28_RS12880 PF00881 Nitroreductase family JMB28_RS12885 PF00199 Catalase JMB28_RS12885 PF06628 Catalase-related immune-responsive JMB28_RS12885 PF18011 C-terminal domain found in long catalases JMB28_RS12890 PF10417 C-terminal domain of 1-Cys peroxiredoxin JMB28_RS12890 PF00578 AhpC/TSA family JMB28_RS12895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS12895 PF13192 Thioredoxin domain JMB28_RS12910 PF00300 Histidine phosphatase superfamily (branch 1) JMB28_RS12930 PF01810 LysE type translocator JMB28_RS12935 PF00893 Small Multidrug Resistance protein JMB28_RS12940 PF00893 Small Multidrug Resistance protein JMB28_RS12960 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS12960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMB28_RS12975 PF05908 Poly-gamma-glutamate hydrolase JMB28_RS12980 PF02386 Cation transport protein JMB28_RS12985 PF01970 Tripartite tricarboxylate transporter TctA family JMB28_RS13000 PF04303 PrpF protein JMB28_RS13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS13005 PF03466 LysR substrate binding domain JMB28_RS13015 PF01510 N-acetylmuramoyl-L-alanine amidase JMB28_RS13015 PF13457 GW (Gly-Tryp) dipeptide domain JMB28_RS13045 PF01084 Ribosomal protein S18 JMB28_RS13055 PF01648 4'-phosphopantetheinyl transferase superfamily JMB28_RS13060 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS13060 PF00975 Thioesterase domain JMB28_RS13060 PF00550 Phosphopantetheine attachment site JMB28_RS13060 PF00668 Condensation domain JMB28_RS13060 PF00501 AMP-binding enzyme JMB28_RS13065 PF00436 Single-strand binding protein family JMB28_RS13070 PF01250 Ribosomal protein S6 JMB28_RS13080 PF01926 50S ribosome-binding GTPase JMB28_RS13080 PF06071 Protein of unknown function (DUF933) JMB28_RS13085 PF06107 Bacterial protein of unknown function (DUF951) JMB28_RS13090 PF00924 Mechanosensitive ion channel JMB28_RS13095 PF10057 Uncharacterized conserved protein (DUF2294) JMB28_RS13100 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JMB28_RS13105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JMB28_RS13105 PF00361 Proton-conducting membrane transporter JMB28_RS13110 PF02311 AraC-like ligand binding domain JMB28_RS13110 PF12833 Helix-turn-helix domain JMB28_RS13115 PF02056 Family 4 glycosyl hydrolase JMB28_RS13115 PF11975 Family 4 glycosyl hydrolase C-terminal domain JMB28_RS13135 PF02096 60Kd inner membrane protein JMB28_RS13145 PF01970 Tripartite tricarboxylate transporter TctA family JMB28_RS13155 PF03401 Tripartite tricarboxylate transporter family receptor JMB28_RS13160 PF04235 Protein of unknown function (DUF418) JMB28_RS13180 PF02687 FtsX-like permease family JMB28_RS13180 PF12704 MacB-like periplasmic core domain JMB28_RS13185 PF00005 ABC transporter JMB28_RS13195 PF03606 C4-dicarboxylate anaerobic carrier JMB28_RS13200 PF04055 Radical SAM superfamily JMB28_RS13200 PF06968 Biotin and Thiamin Synthesis associated domain JMB28_RS13205 PF06445 GyrI-like small molecule binding domain JMB28_RS13205 PF13411 MerR HTH family regulatory protein JMB28_RS13210 PF07690 Major Facilitator Superfamily JMB28_RS13225 PF00171 Aldehyde dehydrogenase family JMB28_RS13245 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS13245 PF00501 AMP-binding enzyme JMB28_RS13250 PF07690 Major Facilitator Superfamily JMB28_RS13255 PF07687 Peptidase dimerisation domain JMB28_RS13255 PF01546 Peptidase family M20/M25/M40 JMB28_RS13260 PF07690 Major Facilitator Superfamily JMB28_RS13265 PF01638 HxlR-like helix-turn-helix JMB28_RS13270 PF01575 MaoC like domain JMB28_RS13275 PF06993 Protein of unknown function (DUF1304) JMB28_RS13285 PF00005 ABC transporter JMB28_RS13285 PF13732 Domain of unknown function (DUF4162) JMB28_RS13290 PF00083 Sugar (and other) transporter JMB28_RS13305 PF01098 Cell cycle protein JMB28_RS13315 PF00962 Adenosine/AMP deaminase JMB28_RS13330 PF14306 PUA-like domain JMB28_RS13330 PF01747 ATP-sulfurylase JMB28_RS13335 PF01925 Sulfite exporter TauE/SafE JMB28_RS13345 PF01903 CbiX JMB28_RS13350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMB28_RS13355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JMB28_RS13355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JMB28_RS13360 PF00175 Oxidoreductase NAD-binding domain JMB28_RS13360 PF00258 Flavodoxin JMB28_RS13360 PF00667 FAD binding domain JMB28_RS13365 PF01507 Phosphoadenosine phosphosulfate reductase family JMB28_RS13370 PF00175 Oxidoreductase NAD-binding domain JMB28_RS13370 PF00970 Oxidoreductase FAD-binding domain JMB28_RS13370 PF00042 Globin JMB28_RS13375 PF02195 ParB-like nuclease domain JMB28_RS13375 PF17762 HTH domain found in ParB protein JMB28_RS13380 PF01053 Cys/Met metabolism PLP-dependent enzyme JMB28_RS13385 PF01053 Cys/Met metabolism PLP-dependent enzyme JMB28_RS13390 PF02574 Homocysteine S-methyltransferase JMB28_RS13390 PF02219 Methylenetetrahydrofolate reductase JMB28_RS13395 PF08267 Cobalamin-independent synthase, N-terminal domain JMB28_RS13395 PF01717 Cobalamin-independent synthase, Catalytic domain JMB28_RS13405 PF00175 Oxidoreductase NAD-binding domain JMB28_RS13405 PF00258 Flavodoxin JMB28_RS13405 PF00667 FAD binding domain JMB28_RS13430 PF00108 Thiolase, N-terminal domain JMB28_RS13430 PF02803 Thiolase, C-terminal domain JMB28_RS13435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JMB28_RS13435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JMB28_RS13440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JMB28_RS13440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JMB28_RS13440 PF02770 Acyl-CoA dehydrogenase, middle domain JMB28_RS13445 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS13445 PF00501 AMP-binding enzyme JMB28_RS13450 PF01144 Coenzyme A transferase JMB28_RS13455 PF00571 CBS domain JMB28_RS13455 PF01769 Divalent cation transporter JMB28_RS13455 PF03448 MgtE intracellular N domain JMB28_RS13460 PF01297 Zinc-uptake complex component A periplasmic JMB28_RS13465 PF00950 ABC 3 transport family JMB28_RS13470 PF00005 ABC transporter JMB28_RS13475 PF01047 MarR family JMB28_RS13485 PF00135 Carboxylesterase family JMB28_RS13500 PF00561 alpha/beta hydrolase fold JMB28_RS13520 PF07690 Major Facilitator Superfamily JMB28_RS13530 PF03466 LysR substrate binding domain JMB28_RS13530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS13535 PF03061 Thioesterase superfamily JMB28_RS13550 PF01757 Acyltransferase family JMB28_RS13555 PF00534 Glycosyl transferases group 1 JMB28_RS13565 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMB28_RS13570 PF00107 Zinc-binding dehydrogenase JMB28_RS13570 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS13575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JMB28_RS13590 PF00501 AMP-binding enzyme JMB28_RS13590 PF13193 AMP-binding enzyme C-terminal domain JMB28_RS13590 PF00550 Phosphopantetheine attachment site JMB28_RS13590 PF00668 Condensation domain JMB28_RS13600 PF00440 Bacterial regulatory proteins, tetR family JMB28_RS13610 PF13520 Amino acid permease JMB28_RS13615 PF00248 Aldo/keto reductase family JMB28_RS13620 PF01497 Periplasmic binding protein JMB28_RS13645 PF07739 TipAS antibiotic-recognition domain JMB28_RS13645 PF13411 MerR HTH family regulatory protein JMB28_RS13655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMB28_RS13655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMB28_RS13660 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS13660 PF13823 Alcohol dehydrogenase GroES-associated JMB28_RS13660 PF00107 Zinc-binding dehydrogenase JMB28_RS13665 PF00753 Metallo-beta-lactamase superfamily JMB28_RS13685 PF00571 CBS domain JMB28_RS13695 PF10417 C-terminal domain of 1-Cys peroxiredoxin JMB28_RS13695 PF00578 AhpC/TSA family JMB28_RS13700 PF00474 Sodium:solute symporter family JMB28_RS13715 PF01381 Helix-turn-helix JMB28_RS13720 PF07690 Major Facilitator Superfamily JMB28_RS13725 PF02554 Carbon starvation protein CstA JMB28_RS13730 PF17762 HTH domain found in ParB protein JMB28_RS13730 PF02195 ParB-like nuclease domain JMB28_RS13735 PF02527 rRNA small subunit methyltransferase G JMB28_RS13740 PF13932 GidA associated domain JMB28_RS13740 PF01134 Glucose inhibited division protein A JMB28_RS13745 PF10396 GTP-binding protein TrmE N-terminus JMB28_RS13745 PF12631 MnmE helical domain JMB28_RS13745 PF01926 50S ribosome-binding GTPase JMB28_RS13750 PF00825 Ribonuclease P JMB28_RS13755 PF00468 Ribosomal protein L34 JMB28_RS13760 PF01380 SIS domain JMB28_RS13780 PF02796 Helix-turn-helix domain of resolvase JMB28_RS13780 PF00239 Resolvase, N terminal domain JMB28_RS13785 PF03466 LysR substrate binding domain JMB28_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMB28_RS13790 PF03061 Thioesterase superfamily JMB28_RS13800 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS13800 PF00107 Zinc-binding dehydrogenase JMB28_RS13840 PF01468 GA module JMB28_RS13845 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMB28_RS13845 PF05257 CHAP domain JMB28_RS13850 PF01061 ABC-2 type transporter JMB28_RS13855 PF01047 MarR family JMB28_RS13870 PF02384 N-6 DNA Methylase JMB28_RS13870 PF12161 HsdM N-terminal domain JMB28_RS13890 PF00239 Resolvase, N terminal domain JMB28_RS13890 PF02796 Helix-turn-helix domain of resolvase JMB28_RS13895 PF00107 Zinc-binding dehydrogenase JMB28_RS13895 PF08240 Alcohol dehydrogenase GroES-like domain JMB28_RS13900 PF00239 Resolvase, N terminal domain JMB28_RS13900 PF02796 Helix-turn-helix domain of resolvase JMB28_RS13905 PF01022 Bacterial regulatory protein, arsR family JMB28_RS13910 PF02040 Arsenical pump membrane protein JMB28_RS13915 PF01451 Low molecular weight phosphotyrosine protein phosphatase JMB28_RS13925 PF01047 MarR family JMB28_RS13930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMB28_RS13930 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMB28_RS13945 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JMB28_RS13955 PF01381 Helix-turn-helix JMB28_RS13975 PF01022 Bacterial regulatory protein, arsR family JMB28_RS13985 PF01446 Replication protein JMB28_RS14000 PF18766 SWI2/SNF2 ATPase JMB28_RS14000 PF12008 Type I restriction and modification enzyme - subunit R C terminal JMB28_RS14000 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JMB28_RS14010 PF00106 short chain dehydrogenase JMB28_RS14020 PF01361 Tautomerase enzyme JMB28_RS14025 PF00239 Resolvase, N terminal domain JMB28_RS14025 PF02796 Helix-turn-helix domain of resolvase JMB28_RS14035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMB28_RS14040 PF00239 Resolvase, N terminal domain JMB28_RS14040 PF02796 Helix-turn-helix domain of resolvase JMB28_RS14045 PF00665 Integrase core domain JMB28_RS14045 PF09299 Mu transposase, C-terminal JMB28_RS14050 PF13401 AAA domain JMB28_RS14080 PF02824 TGS domain JMB28_RS14080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMB28_RS14080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMB28_RS14080 PF03129 Anticodon binding domain JMB28_RS14090 PF10502 Signal peptidase, peptidase S26 JMB28_RS14110 PF13610 DDE domain JMB28_RS14150 PF01076 Plasmid recombination enzyme JMB28_RS14165 PF02486 Replication initiation factor JMB28_RS14170 PF13610 DDE domain JMB28_RS14175 PF03009 Glycerophosphoryl diester phosphodiesterase family JMB28_RS14185 PF03641 Possible lysine decarboxylase JMB28_RS14215 PF01446 Replication protein JMB28_RS14240 PF03432 Relaxase/Mobilisation nuclease domain JMB28_RS14260 PF00109 Beta-ketoacyl synthase, N-terminal domain JMB28_RS14260 PF02801 Beta-ketoacyl synthase, C-terminal domain JMB28_RS14305 PF02796 Helix-turn-helix domain of resolvase JMB28_RS14305 PF00239 Resolvase, N terminal domain JMB28_RS14310 PF13411 MerR HTH family regulatory protein JMB28_RS14320 PF03432 Relaxase/Mobilisation nuclease domain JMB28_RS14325 PF03904 Domain of unknown function (DUF334) JMB28_RS14365 PF10502 Signal peptidase, peptidase S26 JMB28_RS14370 PF02486 Replication initiation factor JMB28_RS14375 PF01610 Transposase JMB28_RS14375 PF13683 Integrase core domain