AL494_RS00010	SM00422	helix_turn_helix, mercury resistance
AL494_RS00015	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS00025	SM00470	ParB-like nuclease domain
AL494_RS00035	SM01228	AL494_RS00035
AL494_RS00055	SM00382	ATPases associated with a variety of cellular activities
AL494_RS00055	SM00760	Bacterial dnaA protein helix-turn-helix domain
AL494_RS00060	SM00480	DNA polymerase III beta subunit
AL494_RS00075	SM00387	Histidine kinase-like ATPases
AL494_RS00075	SM00433	TopoisomeraseII
AL494_RS00080	SM00434	DNA Topoisomerase IV
AL494_RS00120	SM00267	diguanylate cyclase
AL494_RS00135	SM00788	Adenylosuccinate synthetase
AL494_RS00155	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS00165	SM00448	cheY-homologous receiver domain
AL494_RS00165	SM00862	Transcriptional regulatory protein, C terminal
AL494_RS00170	SM00091	PAS domain
AL494_RS00170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL494_RS00170	SM00387	Histidine kinase-like ATPases
AL494_RS00170	SM00388	His Kinase A (phosphoacceptor) domain
AL494_RS00185	SM00849	Metallo-beta-lactamase superfamily
AL494_RS00260	SM00450	Rhodanese Homology Domain
AL494_RS00265	SM00450	Rhodanese Homology Domain
AL494_RS00265	SM00849	Metallo-beta-lactamase superfamily
AL494_RS00275	SM00226	Low molecular weight phosphatase family
AL494_RS00285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL494_RS00320	SM01060	AL494_RS00320
AL494_RS00340	SM00422	helix_turn_helix, mercury resistance
AL494_RS00355	SM00829	Enoylreductase
AL494_RS00460	SM00927	DNA mismatch repair enzyme MutH
AL494_RS00470	SM00422	helix_turn_helix, mercury resistance
AL494_RS00595	SM00382	ATPases associated with a variety of cellular activities
AL494_RS00645	SM00849	Metallo-beta-lactamase superfamily
AL494_RS00655	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS00665	SM01038	Beta galactosidase small chain
AL494_RS00700	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS00760	SM00450	Rhodanese Homology Domain
AL494_RS00790	SM00382	ATPases associated with a variety of cellular activities
AL494_RS00820	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS00965	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS00985	SM01001	AIR carboxylase
AL494_RS01025	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS01035	SM00155	Phospholipase D. Active site motifs.
AL494_RS01040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS01130	SM00854	Bacterial capsule synthesis protein PGA_cap
AL494_RS01160	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01180	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL494_RS01250	SM00849	Metallo-beta-lactamase superfamily
AL494_RS01255	SM00829	Enoylreductase
AL494_RS01280	SM00062	Bacterial periplasmic substrate-binding proteins
AL494_RS01280	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL494_RS01290	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01380	SM00988	UreE urease accessory protein, N-terminal domain
AL494_RS01420	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01425	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01435	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS01510	SM00478	endonuclease III
AL494_RS01560	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01595	SM01266	AL494_RS01595
AL494_RS01635	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS01775	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS01800	SM00854	Bacterial capsule synthesis protein PGA_cap
AL494_RS01845	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01850	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS01855	SM00354	helix_turn _helix lactose operon repressor
AL494_RS01870	SM00829	Enoylreductase
AL494_RS01915	SM01130	AL494_RS01915
AL494_RS01955	SM01061	CAT RNA binding domain
AL494_RS01970	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01975	SM00382	ATPases associated with a variety of cellular activities
AL494_RS01995	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS02090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS02090	SM00895	AL494_RS02090
AL494_RS02240	SM00382	ATPases associated with a variety of cellular activities
AL494_RS02285	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL494_RS02285	SM00382	ATPases associated with a variety of cellular activities
AL494_RS02325	SM00382	ATPases associated with a variety of cellular activities
AL494_RS02345	SM00448	cheY-homologous receiver domain
AL494_RS02345	SM00850	LytTr DNA-binding domain
AL494_RS02350	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL494_RS02350	SM00387	Histidine kinase-like ATPases
AL494_RS02410	SM00871	Bacterial transcription activator, effector binding domain
AL494_RS02435	SM00855	Phosphoglycerate mutase family
AL494_RS02450	SM01022	AL494_RS02450
AL494_RS02480	SM00867	YceI-like domain 
AL494_RS02545	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS02565	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS02570	SM00644	AL494_RS02570
AL494_RS02620	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL494_RS02620	SM01134	AL494_RS02620
AL494_RS02625	SM00829	Enoylreductase
AL494_RS02635	SM01120	AL494_RS02635
AL494_RS02670	SM00829	Enoylreductase
AL494_RS02705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL494_RS02705	SM00387	Histidine kinase-like ATPases
AL494_RS02705	SM00388	His Kinase A (phosphoacceptor) domain
AL494_RS02710	SM00448	cheY-homologous receiver domain
AL494_RS02710	SM00862	Transcriptional regulatory protein, C terminal
AL494_RS02720	SM00382	ATPases associated with a variety of cellular activities
AL494_RS02730	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS02825	SM00382	ATPases associated with a variety of cellular activities
AL494_RS02890	SM00903	Flavin reductase like domain
AL494_RS02965	SM00098	Alkaline phosphatase homologues
AL494_RS02995	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL494_RS03010	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL494_RS03010	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL494_RS03025	SM00047	Lysozyme subfamily 2
AL494_RS03105	SM00062	Bacterial periplasmic substrate-binding proteins
AL494_RS03110	SM00382	ATPases associated with a variety of cellular activities
AL494_RS03140	SM00354	helix_turn _helix lactose operon repressor
AL494_RS03170	SM00382	ATPases associated with a variety of cellular activities
AL494_RS03190	SM00852	Probable molybdopterin binding domain
AL494_RS03200	SM00852	Probable molybdopterin binding domain
AL494_RS03225	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL494_RS03240	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS03290	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL494_RS03290	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL494_RS03290	SM00493	AL494_RS03290
AL494_RS03305	SM01403	AL494_RS03305
AL494_RS03325	SM01382	AL494_RS03325
AL494_RS03325	SM01383	AL494_RS03325
AL494_RS03340	SM00322	K homology RNA-binding domain
AL494_RS03360	SM01374	AL494_RS03360
AL494_RS03365	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL494_RS03420	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS03440	SM00662	RNA polymerases D
AL494_RS03450	SM00382	ATPases associated with a variety of cellular activities
AL494_RS03455	SM00382	ATPases associated with a variety of cellular activities
AL494_RS03490	SM00829	Enoylreductase
AL494_RS03495	SM00829	Enoylreductase
AL494_RS03695	SM00382	ATPases associated with a variety of cellular activities
AL494_RS03720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL494_RS03730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS03730	SM00895	AL494_RS03730
AL494_RS03775	SM01133	AL494_RS03775
AL494_RS03780	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AL494_RS03855	SM00357	Cold shock protein domain
AL494_RS03855	SM00382	ATPases associated with a variety of cellular activities
AL494_RS03855	SM00959	Rho termination factor, N-terminal domain
AL494_RS03870	SM00937	AL494_RS03870
AL494_RS03885	SM00226	Low molecular weight phosphatase family
AL494_RS03945	SM00382	ATPases associated with a variety of cellular activities
AL494_RS04010	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL494_RS04015	SM00155	Phospholipase D. Active site motifs.
AL494_RS04050	SM00487	DEAD-like helicases superfamily
AL494_RS04050	SM00490	helicase superfamily c-terminal domain
AL494_RS04075	SM01005	Alanine racemase, C-terminal domain
AL494_RS04090	SM00331	Sigma factor PP2C-like phosphatases
AL494_RS04090	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AL494_RS04110	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS04110	SM00732	Likely ribonuclease with RNase H fold.
AL494_RS04115	SM00731	SprT homologues.
AL494_RS04165	SM01329	AL494_RS04165
AL494_RS04170	SM00917	LeuA allosteric (dimerisation) domain
AL494_RS04220	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL494_RS04225	SM00382	ATPases associated with a variety of cellular activities
AL494_RS04230	SM00881	CoA binding domain
AL494_RS04245	SM00354	helix_turn _helix lactose operon repressor
AL494_RS04250	SM00640	Glycosyl hydrolases family 32
AL494_RS04260	SM00448	cheY-homologous receiver domain
AL494_RS04260	SM00850	LytTr DNA-binding domain
AL494_RS04270	SM00794	Staphylococcal AgrD protein
AL494_RS04275	SM00793	Accessory gene regulator B
AL494_RS04300	SM00883	Chaperonin 10 Kd subunit
AL494_RS04315	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS04320	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS04340	SM00942	Primase C terminal 1 (PriCT-1)
AL494_RS04435	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS04460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS04475	SM00382	ATPases associated with a variety of cellular activities
AL494_RS04535	SM01131	AL494_RS04535
AL494_RS04545	SM00710	Parallel beta-helix repeats
AL494_RS04585	SM00998	Adenylosuccinate lyase C-terminus
AL494_RS04610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL494_RS04610	SM00292	breast cancer carboxy-terminal domain
AL494_RS04610	SM00532	Ligase N family
AL494_RS04635	SM00845	GatB domain
AL494_RS04640	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL494_RS04660	SM00479	AL494_RS04660
AL494_RS04715	SM00387	Histidine kinase-like ATPases
AL494_RS04720	SM00421	helix_turn_helix, Lux Regulon
AL494_RS04720	SM00448	cheY-homologous receiver domain
AL494_RS04735	SM00226	Low molecular weight phosphatase family
AL494_RS04800	SM00478	endonuclease III
AL494_RS04810	SM00382	ATPases associated with a variety of cellular activities
AL494_RS04995	SM00062	Bacterial periplasmic substrate-binding proteins
AL494_RS04995	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL494_RS05000	SM00382	ATPases associated with a variety of cellular activities
AL494_RS05005	SM00567	E-Z type HEAT repeats
AL494_RS05045	SM00421	helix_turn_helix, Lux Regulon
AL494_RS05045	SM00448	cheY-homologous receiver domain
AL494_RS05075	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS05100	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL494_RS05125	SM00382	ATPases associated with a variety of cellular activities
AL494_RS05215	SM01234	AL494_RS05215
AL494_RS05295	SM00047	Lysozyme subfamily 2
AL494_RS05360	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL494_RS05375	SM00450	Rhodanese Homology Domain
AL494_RS05390	SM00363	S4 RNA-binding domain
AL494_RS05420	SM00849	Metallo-beta-lactamase superfamily
AL494_RS05450	SM00843	AL494_RS05450
AL494_RS05470	SM00830	Chorismate mutase type II
AL494_RS05475	SM00354	helix_turn _helix lactose operon repressor
AL494_RS05505	SM00363	S4 RNA-binding domain
AL494_RS05510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL494_RS05515	SM00563	Phosphate acyltransferases
AL494_RS05555	SM00363	S4 RNA-binding domain
AL494_RS05555	SM01390	AL494_RS05555
AL494_RS05565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL494_RS05580	SM00981	AL494_RS05580
AL494_RS05625	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL494_RS05625	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL494_RS05640	SM00849	Metallo-beta-lactamase superfamily
AL494_RS05650	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL494_RS05660	SM00481	DNA polymerase alpha chain like domain
AL494_RS05665	SM00919	Malic enzyme, NAD binding domain
AL494_RS05665	SM01274	AL494_RS05665
AL494_RS05700	SM01329	AL494_RS05700
AL494_RS05705	SM00448	cheY-homologous receiver domain
AL494_RS05705	SM00862	Transcriptional regulatory protein, C terminal
AL494_RS05710	SM00387	Histidine kinase-like ATPases
AL494_RS05710	SM00388	His Kinase A (phosphoacceptor) domain
AL494_RS05715	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL494_RS05715	SM00474	3'-5' exonuclease
AL494_RS05715	SM00475	5'-3' exonuclease
AL494_RS05715	SM00482	DNA polymerase A domain
AL494_RS05720	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL494_RS05720	SM01232	AL494_RS05720
AL494_RS05730	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL494_RS05750	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL494_RS05790	SM00382	ATPases associated with a variety of cellular activities
AL494_RS05790	SM00994	ClpX C4-type zinc finger
AL494_RS05790	SM01086	C-terminal, D2-small domain, of ClpB protein
AL494_RS05820	SM01004	Delta-aminolevulinic acid dehydratase
AL494_RS05920	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL494_RS05925	SM00382	ATPases associated with a variety of cellular activities
AL494_RS05940	SM01323	AL494_RS05940
AL494_RS05960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL494_RS05960	SM00954	Region found in RelA / SpoT proteins
AL494_RS05970	SM00287	Bacterial SH3 domain homologues
AL494_RS05970	SM00646	AL494_RS05970
AL494_RS05995	SM00382	ATPases associated with a variety of cellular activities
AL494_RS06025	SM00382	ATPases associated with a variety of cellular activities
AL494_RS06040	SM00028	Tetratricopeptide repeats
AL494_RS06045	SM00382	ATPases associated with a variety of cellular activities
AL494_RS06050	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL494_RS06060	SM00732	Likely ribonuclease with RNase H fold.
AL494_RS06095	SM00796	Allophanate hydrolase subunit 1
AL494_RS06100	SM00797	Allophanate hydrolase subunit 2
AL494_RS06110	SM00878	Biotin carboxylase C-terminal domain
AL494_RS06145	SM01103	AL494_RS06145
AL494_RS06155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL494_RS06170	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL494_RS06180	SM00849	Metallo-beta-lactamase superfamily
AL494_RS06195	SM00838	Elongation factor G C-terminus
AL494_RS06200	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL494_RS06220	SM00271	DnaJ molecular chaperone homology domain
AL494_RS06290	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL494_RS06300	SM00400	zinc finger
AL494_RS06300	SM00493	AL494_RS06300
AL494_RS06320	SM00487	DEAD-like helicases superfamily
AL494_RS06320	SM00490	helicase superfamily c-terminal domain
AL494_RS06325	SM00518	AP endonuclease family 2
AL494_RS06330	SM00382	ATPases associated with a variety of cellular activities
AL494_RS06385	SM00849	Metallo-beta-lactamase superfamily
AL494_RS06445	SM00450	Rhodanese Homology Domain
AL494_RS06470	SM00841	Elongation factor P, C-terminal
AL494_RS06470	SM01185	AL494_RS06470
AL494_RS06480	SM00878	Biotin carboxylase C-terminal domain
AL494_RS06540	SM00861	Transketolase, pyrimidine binding domain
AL494_RS06565	SM01350	AL494_RS06565
AL494_RS06570	SM00354	helix_turn _helix lactose operon repressor
AL494_RS06575	SM00642	Alpha-amylase domain
AL494_RS06580	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS06580	SM00871	Bacterial transcription activator, effector binding domain
AL494_RS06640	SM00363	S4 RNA-binding domain
AL494_RS06645	SM00448	cheY-homologous receiver domain
AL494_RS06645	SM00862	Transcriptional regulatory protein, C terminal
AL494_RS06650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL494_RS06650	SM00387	Histidine kinase-like ATPases
AL494_RS06650	SM00388	His Kinase A (phosphoacceptor) domain
AL494_RS06670	SM00487	DEAD-like helicases superfamily
AL494_RS06670	SM00490	helicase superfamily c-terminal domain
AL494_RS06675	SM00257	Lysin motif
AL494_RS06685	SM00870	AL494_RS06685
AL494_RS06695	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS06710	SM00411	bacterial (prokaryotic) histone like domain
AL494_RS06730	SM00562	AL494_RS06730
AL494_RS06750	SM00028	Tetratricopeptide repeats
AL494_RS06755	SM00914	AL494_RS06755
AL494_RS06790	SM00479	AL494_RS06790
AL494_RS06790	SM00491	AL494_RS06790
AL494_RS06805	SM00478	endonuclease III
AL494_RS06845	SM00981	AL494_RS06845
AL494_RS06860	SM00644	AL494_RS06860
AL494_RS06870	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL494_RS06870	SM00475	5'-3' exonuclease
AL494_RS06895	SM00932	Scaffold protein Nfu/NifU N terminal
AL494_RS06900	SM00567	E-Z type HEAT repeats
AL494_RS06900	SM00932	Scaffold protein Nfu/NifU N terminal
AL494_RS06945	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL494_RS06945	SM00245	tail specific protease
AL494_RS06960	SM00014	Acid phosphatase homologues
AL494_RS06965	SM00448	cheY-homologous receiver domain
AL494_RS06965	SM00862	Transcriptional regulatory protein, C terminal
AL494_RS06970	SM00387	Histidine kinase-like ATPases
AL494_RS06970	SM00388	His Kinase A (phosphoacceptor) domain
AL494_RS06975	SM00861	Transketolase, pyrimidine binding domain
AL494_RS06990	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS07030	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07055	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07060	SM00327	von Willebrand factor (vWF) type A domain
AL494_RS07095	SM00357	Cold shock protein domain
AL494_RS07105	SM01005	Alanine racemase, C-terminal domain
AL494_RS07125	SM01130	AL494_RS07125
AL494_RS07130	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL494_RS07145	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07170	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07315	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07325	SM00354	helix_turn _helix lactose operon repressor
AL494_RS07350	SM01061	CAT RNA binding domain
AL494_RS07360	SM00434	DNA Topoisomerase IV
AL494_RS07365	SM00387	Histidine kinase-like ATPases
AL494_RS07365	SM00433	TopoisomeraseII
AL494_RS07370	SM01207	AL494_RS07370
AL494_RS07430	SM00861	Transketolase, pyrimidine binding domain
AL494_RS07455	SM01240	AL494_RS07455
AL494_RS07470	SM01060	AL494_RS07470
AL494_RS07525	SM00318	Staphylococcal nuclease homologues
AL494_RS07535	SM00421	helix_turn_helix, Lux Regulon
AL494_RS07535	SM00448	cheY-homologous receiver domain
AL494_RS07540	SM00387	Histidine kinase-like ATPases
AL494_RS07550	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07590	SM00646	AL494_RS07590
AL494_RS07665	SM00635	Bacterial Ig-like domain 2
AL494_RS07720	SM00507	HNH nucleases
AL494_RS07730	SM00487	DEAD-like helicases superfamily
AL494_RS07735	SM00990	AL494_RS07735
AL494_RS07800	SM00482	DNA polymerase A domain
AL494_RS07830	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS07835	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS07855	SM01230	AL494_RS07855
AL494_RS07860	SM00422	helix_turn_helix, mercury resistance
AL494_RS07920	SM00853	MutL C terminal dimerisation domain
AL494_RS07920	SM01340	AL494_RS07920
AL494_RS07925	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL494_RS07925	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL494_RS07940	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL494_RS07985	SM00322	K homology RNA-binding domain
AL494_RS07985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL494_RS07990	SM00382	ATPases associated with a variety of cellular activities
AL494_RS07995	SM00852	Probable molybdopterin binding domain
AL494_RS08030	SM00866	AL494_RS08030
AL494_RS08035	SM00382	ATPases associated with a variety of cellular activities
AL494_RS08035	SM00843	AL494_RS08035
AL494_RS08040	SM00849	Metallo-beta-lactamase superfamily
AL494_RS08045	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS08045	SM00322	K homology RNA-binding domain
AL494_RS08050	SM01387	AL494_RS08050
AL494_RS08055	SM00904	Riboflavin kinase
AL494_RS08095	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS08095	SM00322	K homology RNA-binding domain
AL494_RS08105	SM00479	AL494_RS08105
AL494_RS08105	SM00481	DNA polymerase alpha chain like domain
AL494_RS08115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL494_RS08155	SM00382	ATPases associated with a variety of cellular activities
AL494_RS08155	SM01086	C-terminal, D2-small domain, of ClpB protein
AL494_RS08175	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL494_RS08175	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL494_RS08175	SM00493	AL494_RS08175
AL494_RS08185	SM00881	CoA binding domain
AL494_RS08245	SM00382	ATPases associated with a variety of cellular activities
AL494_RS08245	SM00962	SRP54-type protein, GTPase domain
AL494_RS08245	SM00963	SRP54-type protein, helical bundle domain
AL494_RS08255	SM00382	ATPases associated with a variety of cellular activities
AL494_RS08255	SM00962	SRP54-type protein, GTPase domain
AL494_RS08255	SM00963	SRP54-type protein, helical bundle domain
AL494_RS08260	SM00968	SMC proteins Flexible Hinge Domain
AL494_RS08265	SM00358	Double-stranded RNA binding motif
AL494_RS08265	SM00535	Ribonuclease III family
AL494_RS08275	SM00822	AL494_RS08275
AL494_RS08280	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL494_RS08300	SM00487	DEAD-like helicases superfamily
AL494_RS08300	SM00490	helicase superfamily c-terminal domain
AL494_RS08315	SM01120	AL494_RS08315
AL494_RS08315	SM01121	AL494_RS08315
AL494_RS08330	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AL494_RS08345	SM00220	Serine/Threonine protein kinases, catalytic domain
AL494_RS08345	SM00740	AL494_RS08345
AL494_RS08350	SM00331	Sigma factor PP2C-like phosphatases
AL494_RS08350	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AL494_RS08385	SM00487	DEAD-like helicases superfamily
AL494_RS08385	SM00490	helicase superfamily c-terminal domain
AL494_RS08395	SM01409	AL494_RS08395
AL494_RS08400	SM00072	Guanylate kinase homologues.
AL494_RS08430	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL494_RS08435	SM00851	MGS-like domain
AL494_RS08435	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL494_RS08435	SM01209	AL494_RS08435
AL494_RS08440	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AL494_RS08465	SM00363	S4 RNA-binding domain
AL494_RS08490	SM00363	S4 RNA-binding domain
AL494_RS08515	SM00864	Tubulin/FtsZ family, GTPase domain
AL494_RS08515	SM00865	Tubulin/FtsZ family, C-terminal domain
AL494_RS08520	SM00842	Cell division protein FtsA
AL494_RS08540	SM00740	AL494_RS08540
AL494_RS08605	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL494_RS08685	SM00465	GIY-YIG type nucleases (URI domain)
AL494_RS08695	SM00463	Small MutS-related domain
AL494_RS08695	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL494_RS08695	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL494_RS08700	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL494_RS08700	SM00481	DNA polymerase alpha chain like domain
AL494_RS08700	SM00483	DNA polymerase X family
AL494_RS08720	SM00873	B3/4 domain
AL494_RS08720	SM00874	tRNA synthetase B5 domain
AL494_RS08720	SM00896	Ferredoxin-fold anticodon binding domain
AL494_RS08730	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL494_RS08815	SM00878	Biotin carboxylase C-terminal domain
AL494_RS08840	SM00838	Elongation factor G C-terminus
AL494_RS08890	SM00382	ATPases associated with a variety of cellular activities
AL494_RS08895	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS08915	SM00861	Transketolase, pyrimidine binding domain
AL494_RS08945	SM00849	Metallo-beta-lactamase superfamily
AL494_RS09005	SM00382	ATPases associated with a variety of cellular activities
AL494_RS09015	SM01209	AL494_RS09015
AL494_RS09015	SM01210	AL494_RS09015
AL494_RS09020	SM00798	AICARFT/IMPCHase bienzyme
AL494_RS09020	SM00851	MGS-like domain
AL494_RS09045	SM01211	AL494_RS09045
AL494_RS09065	SM01001	AIR carboxylase
AL494_RS09135	SM00047	Lysozyme subfamily 2
AL494_RS09135	SM00644	AL494_RS09135
AL494_RS09140	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS09215	SM00914	AL494_RS09215
AL494_RS09245	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL494_RS09310	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL494_RS09310	SM00924	MgtE intracellular N domain
AL494_RS09325	SM00954	Region found in RelA / SpoT proteins
AL494_RS09335	SM01118	AL494_RS09335
AL494_RS09385	SM00382	ATPases associated with a variety of cellular activities
AL494_RS09390	SM00382	ATPases associated with a variety of cellular activities
AL494_RS09415	SM00825	Beta-ketoacyl synthase
AL494_RS09430	SM00382	ATPases associated with a variety of cellular activities
AL494_RS09430	SM01086	C-terminal, D2-small domain, of ClpB protein
AL494_RS09515	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL494_RS09530	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS09540	SM01298	AL494_RS09540
AL494_RS09680	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL494_RS09735	SM00382	ATPases associated with a variety of cellular activities
AL494_RS09765	SM00382	ATPases associated with a variety of cellular activities
AL494_RS09765	SM00930	AL494_RS09765
AL494_RS09775	SM00493	AL494_RS09775
AL494_RS09990	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS09990	SM00357	Cold shock protein domain
AL494_RS09990	SM00955	AL494_RS09990
AL494_RS10015	SM01192	AL494_RS10015
AL494_RS10015	SM01193	AL494_RS10015
AL494_RS10035	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL494_RS10110	SM00028	Tetratricopeptide repeats
AL494_RS10135	SM00487	DEAD-like helicases superfamily
AL494_RS10135	SM00490	helicase superfamily c-terminal domain
AL494_RS10150	SM00257	Lysin motif
AL494_RS10160	SM00957	SecA DEAD-like domain
AL494_RS10160	SM00958	SecA preprotein cross-linking domain
AL494_RS10175	SM00487	DEAD-like helicases superfamily
AL494_RS10175	SM00490	helicase superfamily c-terminal domain
AL494_RS10195	SM00267	diguanylate cyclase
AL494_RS10255	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10305	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL494_RS10325	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10330	SM00341	Helicase and RNase D C-terminal
AL494_RS10330	SM00487	DEAD-like helicases superfamily
AL494_RS10330	SM00490	helicase superfamily c-terminal domain
AL494_RS10330	SM00956	AL494_RS10330
AL494_RS10335	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10350	SM00797	Allophanate hydrolase subunit 2
AL494_RS10355	SM00796	Allophanate hydrolase subunit 1
AL494_RS10415	SM01091	Transporter associated domain
AL494_RS10435	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL494_RS10435	SM01134	AL494_RS10435
AL494_RS10495	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL494_RS10500	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS10505	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10510	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS10615	SM00342	helix_turn_helix, arabinose operon control protein
AL494_RS10625	SM00257	Lysin motif
AL494_RS10640	SM00387	Histidine kinase-like ATPases
AL494_RS10645	SM00448	cheY-homologous receiver domain
AL494_RS10645	SM00862	Transcriptional regulatory protein, C terminal
AL494_RS10680	SM01120	AL494_RS10680
AL494_RS10700	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10715	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10745	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10760	SM00529	Helix-turn-helix diphteria tox regulatory element
AL494_RS10760	SM00899	AL494_RS10760
AL494_RS10765	SM00382	ATPases associated with a variety of cellular activities
AL494_RS10850	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS10890	SM00478	endonuclease III
AL494_RS10895	SM00836	DALR anticodon binding domain
AL494_RS10895	SM01016	Arginyl tRNA synthetase N terminal dom
AL494_RS10910	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL494_RS10980	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS11000	SM00986	Uracil DNA glycosylase superfamily
AL494_RS11000	SM00987	UreE urease accessory protein, C-terminal domain 
AL494_RS11015	SM01022	AL494_RS11015
AL494_RS11025	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS11060	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL494_RS11185	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL494_RS11220	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL494_RS11220	SM01134	AL494_RS11220
AL494_RS11240	SM00354	helix_turn _helix lactose operon repressor
AL494_RS11335	SM00882	Coenzyme A transferase
AL494_RS11340	SM00882	Coenzyme A transferase
AL494_RS11380	SM00838	Elongation factor G C-terminus
AL494_RS11380	SM00889	Elongation factor G, domain IV
AL494_RS11400	SM00663	RNA polymerase I subunit A N-terminus
AL494_RS11435	SM00649	Ribosomal protein L11/L12
AL494_RS11440	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL494_RS11440	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL494_RS11465	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL494_RS11475	SM00840	AL494_RS11475
AL494_RS11490	SM00670	Large family of predicted nucleotide-binding domains
AL494_RS11495	SM00382	ATPases associated with a variety of cellular activities
AL494_RS11500	SM00382	ATPases associated with a variety of cellular activities
AL494_RS11500	SM01086	C-terminal, D2-small domain, of ClpB protein
AL494_RS11535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS11630	SM00905	Dihydroneopterin aldolase
AL494_RS11650	SM00382	ATPases associated with a variety of cellular activities
AL494_RS11660	SM00977	TilS substrate C-terminal domain
AL494_RS11665	SM00316	Ribosomal protein S1-like RNA-binding domain
AL494_RS11675	SM00363	S4 RNA-binding domain
AL494_RS11690	SM00487	DEAD-like helicases superfamily
AL494_RS11690	SM00490	helicase superfamily c-terminal domain
AL494_RS11690	SM00982	AL494_RS11690
AL494_RS11690	SM01058	CarD-like/TRCF domain
AL494_RS11705	SM01400	AL494_RS11705
AL494_RS11740	SM00650	Ribosomal RNA adenine dimethylases
AL494_RS11745	SM00493	AL494_RS11745
AL494_RS11765	SM00465	GIY-YIG type nucleases (URI domain)
AL494_RS11820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL494_RS11820	SM00493	AL494_RS11820
AL494_RS11830	SM00382	ATPases associated with a variety of cellular activities
AL494_RS11845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL494_RS11845	SM00866	AL494_RS11845
AL494_RS11850	SM00642	Alpha-amylase domain
AL494_RS11905	SM00257	Lysin motif
AL494_RS11990	SM00357	Cold shock protein domain
AL494_RS12045	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL494_RS12045	SM01240	AL494_RS12045
AL494_RS12090	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS12115	SM00855	Phosphoglycerate mutase family
AL494_RS12200	SM00344	helix_turn_helix ASNC type
AL494_RS12205	SM00257	Lysin motif
AL494_RS12205	SM00644	AL494_RS12205
AL494_RS12320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL494_RS12325	SM00530	Helix-turn-helix XRE-family like proteins 
AL494_RS12385	SM00014	Acid phosphatase homologues
AL494_RS12460	SM00470	ParB-like nuclease domain
AL494_RS12535	SM00882	Coenzyme A transferase
AL494_RS12570	SM00899	AL494_RS12570
AL494_RS12575	SM00829	Enoylreductase
AL494_RS12610	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL494_RS12615	SM00829	Enoylreductase
AL494_RS12620	SM00226	Low molecular weight phosphatase family
AL494_RS12625	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL494_RS12650	SM00857	Resolvase, N terminal domain
AL494_RS12685	SM00047	Lysozyme subfamily 2
AL494_RS12695	SM00347	helix_turn_helix multiple antibiotic resistance protein
