AL528_RS00025	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS00025	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS00060	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL528_RS00060	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS00060	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL528_RS00060	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL528_RS00060	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS00060	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS00060	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS00060	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL528_RS00065	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL528_RS00065	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS00065	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL528_RS00065	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL528_RS00065	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS00065	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS00065	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS00065	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL528_RS00080	PWY-6700	queuosine biosynthesis
AL528_RS00095	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL528_RS00095	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL528_RS00095	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL528_RS00155	PWY-5958	acridone alkaloid biosynthesis
AL528_RS00155	PWY-6543	4-aminobenzoate biosynthesis
AL528_RS00155	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL528_RS00155	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL528_RS00160	PWY-5958	acridone alkaloid biosynthesis
AL528_RS00160	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL528_RS00160	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL528_RS00165	PWY-6703	preQ<sub>0</sub> biosynthesis
AL528_RS00175	PWY-6703	preQ<sub>0</sub> biosynthesis
AL528_RS00205	PWY-6906	chitin derivatives degradation
AL528_RS00205	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AL528_RS00205	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AL528_RS00215	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AL528_RS00215	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AL528_RS00230	PWY-3801	sucrose degradation II (sucrose synthase)
AL528_RS00230	PWY-6527	stachyose degradation
AL528_RS00230	PWY-7238	sucrose biosynthesis II
AL528_RS00230	PWY-7343	UDP-glucose biosynthesis
AL528_RS00255	PWY-1622	formaldehyde assimilation I (serine pathway)
AL528_RS00255	PWY-5392	reductive TCA cycle II
AL528_RS00255	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL528_RS00255	PWY-5690	TCA cycle II (plants and fungi)
AL528_RS00255	PWY-5913	TCA cycle VI (obligate autotrophs)
AL528_RS00255	PWY-6728	methylaspartate cycle
AL528_RS00255	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS00255	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL528_RS00255	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL528_RS00295	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AL528_RS00375	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL528_RS00375	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL528_RS00375	PWY-6936	seleno-amino acid biosynthesis
AL528_RS00375	PWY-702	L-methionine biosynthesis II
AL528_RS00500	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL528_RS00500	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL528_RS00530	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL528_RS00530	PWY-622	starch biosynthesis
AL528_RS00715	PWY-3821	galactose degradation III
AL528_RS00715	PWY-6317	galactose degradation I (Leloir pathway)
AL528_RS00715	PWY-6527	stachyose degradation
AL528_RS00715	PWY-7391	isoprene biosynthesis II (engineered)
AL528_RS00715	PWY-922	mevalonate pathway I
AL528_RS00720	PWY-7391	isoprene biosynthesis II (engineered)
AL528_RS00720	PWY-922	mevalonate pathway I
AL528_RS00725	PWY-3821	galactose degradation III
AL528_RS00725	PWY-6174	mevalonate pathway II (archaea)
AL528_RS00725	PWY-6317	galactose degradation I (Leloir pathway)
AL528_RS00725	PWY-6527	stachyose degradation
AL528_RS00725	PWY-7391	isoprene biosynthesis II (engineered)
AL528_RS00725	PWY-922	mevalonate pathway I
AL528_RS00730	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL528_RS00735	PWY-1281	sulfoacetaldehyde degradation I
AL528_RS00735	PWY-5482	pyruvate fermentation to acetate II
AL528_RS00735	PWY-5485	pyruvate fermentation to acetate IV
AL528_RS00735	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS00735	PWY-6637	sulfolactate degradation II
AL528_RS00785	PWY-6910	hydroxymethylpyrimidine salvage
AL528_RS00785	PWY-7356	thiamin salvage IV (yeast)
AL528_RS00785	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL528_RS00840	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS00840	PWY-5686	UMP biosynthesis
AL528_RS00845	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL528_RS00845	PWY-6855	chitin degradation I (archaea)
AL528_RS00845	PWY-6906	chitin derivatives degradation
AL528_RS00860	PWY-5663	tetrahydrobiopterin biosynthesis I
AL528_RS00860	PWY-5664	tetrahydrobiopterin biosynthesis II
AL528_RS00860	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL528_RS00860	PWY-6703	preQ<sub>0</sub> biosynthesis
AL528_RS00860	PWY-6983	tetrahydrobiopterin biosynthesis III
AL528_RS00860	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AL528_RS00915	PWY-5057	L-valine degradation II
AL528_RS00915	PWY-5076	L-leucine degradation III
AL528_RS00915	PWY-5078	L-isoleucine degradation II
AL528_RS00915	PWY-5101	L-isoleucine biosynthesis II
AL528_RS00915	PWY-5103	L-isoleucine biosynthesis III
AL528_RS00915	PWY-5104	L-isoleucine biosynthesis IV
AL528_RS00915	PWY-5108	L-isoleucine biosynthesis V
AL528_RS00985	PWY-4261	glycerol degradation I
AL528_RS01015	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL528_RS01015	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL528_RS01015	PWY-7242	D-fructuronate degradation
AL528_RS01015	PWY-7310	D-glucosaminate degradation
AL528_RS01015	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL528_RS01235	PWY-6936	seleno-amino acid biosynthesis
AL528_RS01235	PWY-7274	D-cycloserine biosynthesis
AL528_RS01240	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS01280	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AL528_RS01285	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AL528_RS01380	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL528_RS01380	PWY-6148	tetrahydromethanopterin biosynthesis
AL528_RS01380	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL528_RS01380	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL528_RS01385	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL528_RS01385	PWY-6148	tetrahydromethanopterin biosynthesis
AL528_RS01385	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL528_RS01385	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL528_RS01390	PWY-6614	tetrahydrofolate biosynthesis
AL528_RS01395	PWY-6936	seleno-amino acid biosynthesis
AL528_RS01410	PWY-6599	guanine and guanosine salvage II
AL528_RS01410	PWY-6609	adenine and adenosine salvage III
AL528_RS01410	PWY-6610	adenine and adenosine salvage IV
AL528_RS01410	PWY-6620	guanine and guanosine salvage
AL528_RS01450	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AL528_RS01465	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL528_RS01465	PWY-5667	CDP-diacylglycerol biosynthesis I
AL528_RS01465	PWY-6453	stigma estolide biosynthesis
AL528_RS01465	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL528_RS01465	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL528_RS01485	PWY-7560	methylerythritol phosphate pathway II
AL528_RS01515	PWY-2201	folate transformations I
AL528_RS01550	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL528_RS01550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS01550	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS01550	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL528_RS01550	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL528_RS01550	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL528_RS01670	PWY-5101	L-isoleucine biosynthesis II
AL528_RS01670	PWY-5103	L-isoleucine biosynthesis III
AL528_RS01670	PWY-5104	L-isoleucine biosynthesis IV
AL528_RS01670	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL528_RS01880	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS01885	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL528_RS01885	PWY-6596	adenosine nucleotides degradation I
AL528_RS01885	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS02245	PWY-5340	sulfate activation for sulfonation
AL528_RS02250	PWY-5278	sulfite oxidation III
AL528_RS02250	PWY-5340	sulfate activation for sulfonation
AL528_RS02250	PWY-6683	sulfate reduction III (assimilatory)
AL528_RS02250	PWY-6932	selenate reduction
AL528_RS02260	PWY-5194	siroheme biosynthesis
AL528_RS02260	PWY-5441	S-methyl-L-methionine cycle
AL528_RS02260	PWY-702	L-methionine biosynthesis II
AL528_RS02260	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL528_RS02265	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL528_RS02270	PWY-5194	siroheme biosynthesis
AL528_RS02270	PWY-5441	S-methyl-L-methionine cycle
AL528_RS02270	PWY-702	L-methionine biosynthesis II
AL528_RS02270	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL528_RS02275	PWY-6683	sulfate reduction III (assimilatory)
AL528_RS02280	PWY-6683	sulfate reduction III (assimilatory)
AL528_RS02315	PWY-2201	folate transformations I
AL528_RS02315	PWY-3841	folate transformations II
AL528_RS02320	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL528_RS02320	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL528_RS02320	PWY-6936	seleno-amino acid biosynthesis
AL528_RS02320	PWY-702	L-methionine biosynthesis II
AL528_RS02330	PWY-6683	sulfate reduction III (assimilatory)
AL528_RS02360	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL528_RS02360	PWY-5109	2-methylbutanoate biosynthesis
AL528_RS02360	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL528_RS02360	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL528_RS02360	PWY-5177	glutaryl-CoA degradation
AL528_RS02360	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL528_RS02360	PWY-6435	4-hydroxybenzoate biosynthesis V
AL528_RS02360	PWY-6583	pyruvate fermentation to butanol I
AL528_RS02360	PWY-6863	pyruvate fermentation to hexanol
AL528_RS02360	PWY-6883	pyruvate fermentation to butanol II
AL528_RS02360	PWY-6944	androstenedione degradation
AL528_RS02360	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL528_RS02360	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL528_RS02360	PWY-7007	methyl ketone biosynthesis
AL528_RS02360	PWY-7046	4-coumarate degradation (anaerobic)
AL528_RS02360	PWY-7094	fatty acid salvage
AL528_RS02360	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL528_RS02360	PWY-735	jasmonic acid biosynthesis
AL528_RS02360	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL528_RS02360	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL528_RS02360	PWY-7726	AL528_RS02360
AL528_RS02500	PWY-5028	L-histidine degradation II
AL528_RS02500	PWY-5030	L-histidine degradation III
AL528_RS02505	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AL528_RS02520	PWY-5344	L-homocysteine biosynthesis
AL528_RS02545	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS02550	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL528_RS02550	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL528_RS02550	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL528_RS02550	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL528_RS02600	PWY-6825	phosphatidylcholine biosynthesis V
AL528_RS02900	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS02905	PWY-5101	L-isoleucine biosynthesis II
AL528_RS02905	PWY-5103	L-isoleucine biosynthesis III
AL528_RS02905	PWY-5104	L-isoleucine biosynthesis IV
AL528_RS02905	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL528_RS02905	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL528_RS02905	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL528_RS02905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL528_RS02910	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL528_RS02980	PWY-6807	xyloglucan degradation II (exoglucanase)
AL528_RS03010	PWY-6807	xyloglucan degradation II (exoglucanase)
AL528_RS03180	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS03180	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS03180	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS03225	PWY-6654	phosphopantothenate biosynthesis III
AL528_RS03230	PWY-6654	phosphopantothenate biosynthesis III
AL528_RS03240	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS03370	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL528_RS03370	PWY-6549	L-glutamine biosynthesis III
AL528_RS03370	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL528_RS03370	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL528_RS03425	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS03425	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS03425	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS03425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS03425	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL528_RS03445	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL528_RS03445	PWY-7494	choline degradation IV
AL528_RS03450	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL528_RS03450	PWY-7494	choline degradation IV
AL528_RS03545	PWY-3341	L-proline biosynthesis III
AL528_RS03545	PWY-4981	L-proline biosynthesis II (from arginine)
AL528_RS03545	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL528_RS03545	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL528_RS03550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS03550	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS03555	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS03560	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS03560	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS03575	PWY-7723	AL528_RS03575
AL528_RS03605	PWY-4981	L-proline biosynthesis II (from arginine)
AL528_RS03605	PWY-4984	urea cycle
AL528_RS03605	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS03620	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL528_RS03620	PWY-6855	chitin degradation I (archaea)
AL528_RS03620	PWY-6906	chitin derivatives degradation
AL528_RS03675	PWY-6654	phosphopantothenate biosynthesis III
AL528_RS03700	PWY-5344	L-homocysteine biosynthesis
AL528_RS03700	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AL528_RS03755	PWY-5704	urea degradation II
AL528_RS03760	PWY-5704	urea degradation II
AL528_RS03765	PWY-5704	urea degradation II
AL528_RS03830	PWY-5686	UMP biosynthesis
AL528_RS03990	PWY-6853	ethylene biosynthesis II (microbes)
AL528_RS04050	PWY-6174	mevalonate pathway II (archaea)
AL528_RS04050	PWY-7391	isoprene biosynthesis II (engineered)
AL528_RS04050	PWY-7524	mevalonate pathway III (archaea)
AL528_RS04050	PWY-7571	ferrichrome A biosynthesis
AL528_RS04050	PWY-922	mevalonate pathway I
AL528_RS04060	PWY-6174	mevalonate pathway II (archaea)
AL528_RS04060	PWY-7391	isoprene biosynthesis II (engineered)
AL528_RS04060	PWY-7524	mevalonate pathway III (archaea)
AL528_RS04060	PWY-922	mevalonate pathway I
AL528_RS04175	PWY-4041	&gamma;-glutamyl cycle
AL528_RS04175	PWY-5826	hypoglycin biosynthesis
AL528_RS04185	PWY-7560	methylerythritol phosphate pathway II
AL528_RS04235	PWY-4261	glycerol degradation I
AL528_RS04250	PWY-7425	2-chloroacrylate degradation I
AL528_RS04285	PWY-2941	L-lysine biosynthesis II
AL528_RS04285	PWY-2942	L-lysine biosynthesis III
AL528_RS04285	PWY-5097	L-lysine biosynthesis VI
AL528_RS04285	PWY-7581	<i>N</i>-acetylneuraminate and <i>N</i>-acetylmannosamine degradation II
AL528_RS04400	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS04460	PWY-4261	glycerol degradation I
AL528_RS04460	PWY-5530	sorbitol biosynthesis II
AL528_RS04640	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL528_RS04640	PWY-3602	L-carnitine degradation II
AL528_RS04640	PWY-5109	2-methylbutanoate biosynthesis
AL528_RS04640	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL528_RS04640	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL528_RS04640	PWY-5177	glutaryl-CoA degradation
AL528_RS04640	PWY-5515	L-arabinose degradation II
AL528_RS04640	PWY-5525	D-glucuronate degradation I
AL528_RS04640	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL528_RS04640	PWY-6435	4-hydroxybenzoate biosynthesis V
AL528_RS04640	PWY-6583	pyruvate fermentation to butanol I
AL528_RS04640	PWY-6863	pyruvate fermentation to hexanol
AL528_RS04640	PWY-6883	pyruvate fermentation to butanol II
AL528_RS04640	PWY-6944	androstenedione degradation
AL528_RS04640	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL528_RS04640	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL528_RS04640	PWY-7007	methyl ketone biosynthesis
AL528_RS04640	PWY-7046	4-coumarate degradation (anaerobic)
AL528_RS04640	PWY-7094	fatty acid salvage
AL528_RS04640	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL528_RS04640	PWY-735	jasmonic acid biosynthesis
AL528_RS04640	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL528_RS04640	PWY-7472	D-carnitine degradation II
AL528_RS04640	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL528_RS04640	PWY-7726	AL528_RS04640
AL528_RS04670	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL528_RS04800	PWY-1622	formaldehyde assimilation I (serine pathway)
AL528_RS04800	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS05050	PWY-3781	aerobic respiration I (cytochrome c)
AL528_RS05050	PWY-4521	arsenite oxidation I (respiratory)
AL528_RS05050	PWY-6692	Fe(II) oxidation
AL528_RS05050	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL528_RS05060	PWY-101	photosynthesis light reactions
AL528_RS05060	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AL528_RS05105	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS05190	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AL528_RS05190	PWY-6174	mevalonate pathway II (archaea)
AL528_RS05190	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AL528_RS05190	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AL528_RS05190	PWY-7102	bisabolene biosynthesis
AL528_RS05190	PWY-7391	isoprene biosynthesis II (engineered)
AL528_RS05190	PWY-7524	mevalonate pathway III (archaea)
AL528_RS05190	PWY-7560	methylerythritol phosphate pathway II
AL528_RS05190	PWY-922	mevalonate pathway I
AL528_RS05225	PWY-4261	glycerol degradation I
AL528_RS05250	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS05250	PWY-5723	Rubisco shunt
AL528_RS05270	PWY-5028	L-histidine degradation II
AL528_RS05270	PWY-5030	L-histidine degradation III
AL528_RS05275	PWY-5028	L-histidine degradation II
AL528_RS05275	PWY-5030	L-histidine degradation III
AL528_RS05370	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL528_RS05370	PWY-5491	diethylphosphate degradation
AL528_RS05415	PWY-1881	formate oxidation to CO<sub>2</sub>
AL528_RS05415	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS05415	PWY-6696	oxalate degradation III
AL528_RS05465	PWY-5667	CDP-diacylglycerol biosynthesis I
AL528_RS05465	PWY-5981	CDP-diacylglycerol biosynthesis III
AL528_RS05550	PWY-3821	galactose degradation III
AL528_RS05550	PWY-6317	galactose degradation I (Leloir pathway)
AL528_RS05550	PWY-6527	stachyose degradation
AL528_RS05555	PWY-3821	galactose degradation III
AL528_RS05555	PWY-6317	galactose degradation I (Leloir pathway)
AL528_RS05555	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AL528_RS05555	PWY-6527	stachyose degradation
AL528_RS05555	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AL528_RS05555	PWY-7344	UDP-D-galactose biosynthesis
AL528_RS05560	PWY-6317	galactose degradation I (Leloir pathway)
AL528_RS05560	PWY-6527	stachyose degradation
AL528_RS05605	PWY-6823	molybdenum cofactor biosynthesis
AL528_RS05615	PWY-6823	molybdenum cofactor biosynthesis
AL528_RS05625	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AL528_RS05625	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AL528_RS05630	PWY-6823	molybdenum cofactor biosynthesis
AL528_RS05820	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS05940	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL528_RS06050	PWY-31	canavanine degradation
AL528_RS06050	PWY-4984	urea cycle
AL528_RS06050	PWY-6305	putrescine biosynthesis IV
AL528_RS06050	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL528_RS06065	PWY-6749	CMP-legionaminate biosynthesis I
AL528_RS06070	PWY-6531	mannitol cycle
AL528_RS06090	PWY-6749	CMP-legionaminate biosynthesis I
AL528_RS06140	PWY-3861	mannitol degradation II
AL528_RS06140	PWY-3881	mannitol biosynthesis
AL528_RS06140	PWY-5659	GDP-mannose biosynthesis
AL528_RS06140	PWY-6992	1,5-anhydrofructose degradation
AL528_RS06140	PWY-7456	mannan degradation
AL528_RS06140	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AL528_RS06140	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL528_RS06175	PWY-4202	arsenate detoxification I (glutaredoxin)
AL528_RS06175	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL528_RS06175	PWY-6608	guanosine nucleotides degradation III
AL528_RS06175	PWY-6609	adenine and adenosine salvage III
AL528_RS06175	PWY-6611	adenine and adenosine salvage V
AL528_RS06175	PWY-6620	guanine and guanosine salvage
AL528_RS06175	PWY-6627	salinosporamide A biosynthesis
AL528_RS06175	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL528_RS06175	PWY-7179	purine deoxyribonucleosides degradation I
AL528_RS06175	PWY-7179-1	purine deoxyribonucleosides degradation
AL528_RS06180	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL528_RS06185	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL528_RS06190	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL528_RS06200	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL528_RS06200	PWY-6153	autoinducer AI-2 biosynthesis I
AL528_RS06200	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AL528_RS06220	PWY-3961	phosphopantothenate biosynthesis II
AL528_RS06235	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL528_RS06235	PWY-7177	UTP and CTP dephosphorylation II
AL528_RS06235	PWY-7185	UTP and CTP dephosphorylation I
AL528_RS06240	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS06240	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS06240	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS06240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS06240	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL528_RS06245	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS06245	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS06260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS06270	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL528_RS06300	PWY-1622	formaldehyde assimilation I (serine pathway)
AL528_RS06300	PWY-181	photorespiration
AL528_RS06300	PWY-2161	folate polyglutamylation
AL528_RS06300	PWY-2201	folate transformations I
AL528_RS06300	PWY-3661	glycine betaine degradation I
AL528_RS06300	PWY-3661-1	glycine betaine degradation II (mammalian)
AL528_RS06300	PWY-3841	folate transformations II
AL528_RS06300	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS06305	PWY-7183	pyrimidine nucleobases salvage I
AL528_RS06310	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AL528_RS06340	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS06350	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS06365	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS06365	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS06370	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL528_RS06370	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL528_RS06370	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL528_RS06370	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL528_RS06370	PWY-6113	superpathway of mycolate biosynthesis
AL528_RS06370	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL528_RS06370	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL528_RS06370	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL528_RS06370	PWY-7663	gondoate biosynthesis (anaerobic)
AL528_RS06370	PWY-7664	oleate biosynthesis IV (anaerobic)
AL528_RS06370	PWYG-321	mycolate biosynthesis
AL528_RS06390	PWY-6899	base-degraded thiamin salvage
AL528_RS06390	PWY-7356	thiamin salvage IV (yeast)
AL528_RS06395	PWY-6910	hydroxymethylpyrimidine salvage
AL528_RS06395	PWY-7356	thiamin salvage IV (yeast)
AL528_RS06395	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL528_RS06400	PWY-6897	thiamin salvage II
AL528_RS06400	PWY-7356	thiamin salvage IV (yeast)
AL528_RS06400	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL528_RS06405	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL528_RS06405	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL528_RS06405	PWY-6897	thiamin salvage II
AL528_RS06405	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL528_RS06405	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL528_RS06405	PWY-7356	thiamin salvage IV (yeast)
AL528_RS06405	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL528_RS06440	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS06440	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS06445	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS06445	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS06470	PWY-6012	acyl carrier protein metabolism I
AL528_RS06470	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL528_RS06475	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL528_RS06565	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL528_RS06570	PWY-6871	3-methylbutanol biosynthesis
AL528_RS06575	PWY-5103	L-isoleucine biosynthesis III
AL528_RS06575	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL528_RS06580	PWY-5101	L-isoleucine biosynthesis II
AL528_RS06580	PWY-5103	L-isoleucine biosynthesis III
AL528_RS06580	PWY-5104	L-isoleucine biosynthesis IV
AL528_RS06580	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL528_RS06580	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL528_RS06580	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL528_RS06580	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL528_RS06585	PWY-5101	L-isoleucine biosynthesis II
AL528_RS06585	PWY-5103	L-isoleucine biosynthesis III
AL528_RS06585	PWY-5104	L-isoleucine biosynthesis IV
AL528_RS06585	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL528_RS06585	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL528_RS06585	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL528_RS06585	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL528_RS06590	PWY-5101	L-isoleucine biosynthesis II
AL528_RS06590	PWY-5103	L-isoleucine biosynthesis III
AL528_RS06590	PWY-5104	L-isoleucine biosynthesis IV
AL528_RS06590	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL528_RS06600	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL528_RS06600	PWY-5368	dimorphecolate biosynthesis
AL528_RS06600	PWY-5995	linoleate biosynthesis I (plants)
AL528_RS06600	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL528_RS06600	PWY-6803	phosphatidylcholine acyl editing
AL528_RS06600	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL528_RS06600	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL528_RS06600	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL528_RS06600	PWY-7470	phosphatidylcholine biosynthesis VII
AL528_RS06600	PWY-7618	ricinoleate biosynthesis
AL528_RS06610	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL528_RS06610	PWY-5368	dimorphecolate biosynthesis
AL528_RS06610	PWY-5995	linoleate biosynthesis I (plants)
AL528_RS06610	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL528_RS06610	PWY-6803	phosphatidylcholine acyl editing
AL528_RS06610	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL528_RS06610	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL528_RS06610	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL528_RS06610	PWY-7470	phosphatidylcholine biosynthesis VII
AL528_RS06610	PWY-7618	ricinoleate biosynthesis
AL528_RS06830	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AL528_RS06840	PWY-5381	pyridine nucleotide cycling (plants)
AL528_RS06860	PWY-6123	inosine-5'-phosphate biosynthesis I
AL528_RS06860	PWY-6124	inosine-5'-phosphate biosynthesis II
AL528_RS06860	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS06860	PWY-7234	inosine-5'-phosphate biosynthesis III
AL528_RS06905	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL528_RS06915	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL528_RS06915	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL528_RS06915	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL528_RS07085	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS07245	PWY-5155	&beta;-alanine biosynthesis III
AL528_RS07270	PWY-6700	queuosine biosynthesis
AL528_RS07275	PWY-6004	glycine betaine biosynthesis V (from glycine)
AL528_RS07295	PWY-5392	reductive TCA cycle II
AL528_RS07295	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL528_RS07295	PWY-5690	TCA cycle II (plants and fungi)
AL528_RS07295	PWY-5913	TCA cycle VI (obligate autotrophs)
AL528_RS07295	PWY-6728	methylaspartate cycle
AL528_RS07295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS07295	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS07295	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL528_RS07335	PWY-2201	folate transformations I
AL528_RS07335	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS07405	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL528_RS07405	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL528_RS07415	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL528_RS07805	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL528_RS07810	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS07810	PWY-1622	formaldehyde assimilation I (serine pathway)
AL528_RS07810	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL528_RS07810	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS07810	PWY-5723	Rubisco shunt
AL528_RS07810	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL528_RS07810	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS07810	PWY-6886	1-butanol autotrophic biosynthesis
AL528_RS07810	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS07810	PWY-7003	glycerol degradation to butanol
AL528_RS07810	PWY-7124	ethylene biosynthesis V (engineered)
AL528_RS07810	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL528_RS07820	PWY-6502	oxidized GTP and dGTP detoxification
AL528_RS07830	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL528_RS07830	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL528_RS07835	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL528_RS07835	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AL528_RS07865	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS07865	PWY-5723	Rubisco shunt
AL528_RS07920	PWY-5525	D-glucuronate degradation I
AL528_RS07925	PWY-6167	flavin biosynthesis II (archaea)
AL528_RS07925	PWY-6168	flavin biosynthesis III (fungi)
AL528_RS07925	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS07930	PWY-6167	flavin biosynthesis II (archaea)
AL528_RS07930	PWY-6168	flavin biosynthesis III (fungi)
AL528_RS07930	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL528_RS07935	PWY-6167	flavin biosynthesis II (archaea)
AL528_RS07935	PWY-6168	flavin biosynthesis III (fungi)
AL528_RS07940	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AL528_RS07940	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL528_RS07950	PWY-5481	pyruvate fermentation to lactate
AL528_RS07950	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS08060	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS08060	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS08075	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL528_RS08075	PWY-3461	L-tyrosine biosynthesis II
AL528_RS08075	PWY-3462	L-phenylalanine biosynthesis II
AL528_RS08075	PWY-6120	L-tyrosine biosynthesis III
AL528_RS08075	PWY-6164	3-dehydroquinate biosynthesis I
AL528_RS08075	PWY-6627	salinosporamide A biosynthesis
AL528_RS08075	PWY-7626	bacilysin biosynthesis
AL528_RS08075	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL528_RS08100	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL528_RS08100	PWY-2161	folate polyglutamylation
AL528_RS08100	PWY-2201	folate transformations I
AL528_RS08100	PWY-3841	folate transformations II
AL528_RS08120	PWY-5667	CDP-diacylglycerol biosynthesis I
AL528_RS08120	PWY-5981	CDP-diacylglycerol biosynthesis III
AL528_RS08120	PWY-6453	stigma estolide biosynthesis
AL528_RS08120	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL528_RS08120	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AL528_RS08120	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL528_RS08120	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AL528_RS08140	PWY-6832	2-aminoethylphosphonate degradation II
AL528_RS08175	PWY-6823	molybdenum cofactor biosynthesis
AL528_RS08175	PWY-6891	thiazole biosynthesis II (Bacillus)
AL528_RS08175	PWY-6892	thiazole biosynthesis I (E. coli)
AL528_RS08175	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL528_RS08210	PWY-5482	pyruvate fermentation to acetate II
AL528_RS08210	PWY-5485	pyruvate fermentation to acetate IV
AL528_RS08210	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS08250	PWY-1281	sulfoacetaldehyde degradation I
AL528_RS08250	PWY-5482	pyruvate fermentation to acetate II
AL528_RS08250	PWY-5485	pyruvate fermentation to acetate IV
AL528_RS08250	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS08250	PWY-6637	sulfolactate degradation II
AL528_RS08270	PWY-4381	fatty acid biosynthesis initiation I
AL528_RS08270	PWY-5743	3-hydroxypropanoate cycle
AL528_RS08270	PWY-5744	glyoxylate assimilation
AL528_RS08270	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL528_RS08270	PWY-6679	jadomycin biosynthesis
AL528_RS08270	PWY-6722	candicidin biosynthesis
AL528_RS08270	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL528_RS08275	PWY-4381	fatty acid biosynthesis initiation I
AL528_RS08275	PWY-5743	3-hydroxypropanoate cycle
AL528_RS08275	PWY-5744	glyoxylate assimilation
AL528_RS08275	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL528_RS08275	PWY-6679	jadomycin biosynthesis
AL528_RS08275	PWY-6722	candicidin biosynthesis
AL528_RS08275	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL528_RS08280	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS08280	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS08280	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS08280	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL528_RS08285	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS08285	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL528_RS08285	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS08285	PWY-5723	Rubisco shunt
AL528_RS08285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS08285	PWY-6886	1-butanol autotrophic biosynthesis
AL528_RS08285	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS08285	PWY-7003	glycerol degradation to butanol
AL528_RS08285	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL528_RS08285	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL528_RS08300	PWY-5913	TCA cycle VI (obligate autotrophs)
AL528_RS08300	PWY-6549	L-glutamine biosynthesis III
AL528_RS08300	PWY-6728	methylaspartate cycle
AL528_RS08300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS08300	PWY-7124	ethylene biosynthesis V (engineered)
AL528_RS08300	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS08300	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL528_RS08330	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS08330	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS08330	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS08330	PWY-7003	glycerol degradation to butanol
AL528_RS08400	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS08410	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS08410	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL528_RS08415	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS08415	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL528_RS08420	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS08420	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL528_RS08425	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL528_RS08450	PWY-2161	folate polyglutamylation
AL528_RS08525	PWY-6700	queuosine biosynthesis
AL528_RS08530	PWY-6700	queuosine biosynthesis
AL528_RS08550	PWY-6605	adenine and adenosine salvage II
AL528_RS08550	PWY-6610	adenine and adenosine salvage IV
AL528_RS08620	PWY-6823	molybdenum cofactor biosynthesis
AL528_RS08620	PWY-6891	thiazole biosynthesis II (Bacillus)
AL528_RS08620	PWY-6892	thiazole biosynthesis I (E. coli)
AL528_RS08620	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL528_RS08675	PWY-7193	pyrimidine ribonucleosides salvage I
AL528_RS08715	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL528_RS08715	PWY-6153	autoinducer AI-2 biosynthesis I
AL528_RS08715	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AL528_RS08730	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL528_RS08740	PWY-5381	pyridine nucleotide cycling (plants)
AL528_RS08740	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL528_RS08765	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL528_RS08820	PWY-2201	folate transformations I
AL528_RS08855	PWY-7039	phosphatidate metabolism, as a signaling molecule
AL528_RS08860	PWY-6556	pyrimidine ribonucleosides salvage II
AL528_RS08860	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL528_RS08860	PWY-7193	pyrimidine ribonucleosides salvage I
AL528_RS08860	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL528_RS08935	PWY-6854	ethylene biosynthesis III (microbes)
AL528_RS08965	PWY-2722	trehalose degradation IV
AL528_RS08965	PWY-2723	trehalose degradation V
AL528_RS08965	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL528_RS08965	PWY-5661	GDP-glucose biosynthesis
AL528_RS08965	PWY-621	sucrose degradation III (sucrose invertase)
AL528_RS08965	PWY-7238	sucrose biosynthesis II
AL528_RS08965	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL528_RS09015	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL528_RS09040	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL528_RS09040	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL528_RS09110	PWY-1281	sulfoacetaldehyde degradation I
AL528_RS09110	PWY-5482	pyruvate fermentation to acetate II
AL528_RS09110	PWY-5485	pyruvate fermentation to acetate IV
AL528_RS09110	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS09110	PWY-6637	sulfolactate degradation II
AL528_RS09115	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL528_RS09115	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL528_RS09170	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL528_RS09180	PWY-3341	L-proline biosynthesis III
AL528_RS09180	PWY-4981	L-proline biosynthesis II (from arginine)
AL528_RS09180	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL528_RS09275	PWY-7205	CMP phosphorylation
AL528_RS09290	PWY-5667	CDP-diacylglycerol biosynthesis I
AL528_RS09290	PWY-5981	CDP-diacylglycerol biosynthesis III
AL528_RS09305	PWY-5839	menaquinol-7 biosynthesis
AL528_RS09305	PWY-5844	menaquinol-9 biosynthesis
AL528_RS09305	PWY-5849	menaquinol-6 biosynthesis
AL528_RS09305	PWY-5890	menaquinol-10 biosynthesis
AL528_RS09305	PWY-5891	menaquinol-11 biosynthesis
AL528_RS09305	PWY-5892	menaquinol-12 biosynthesis
AL528_RS09305	PWY-5895	menaquinol-13 biosynthesis
AL528_RS09315	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL528_RS09315	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL528_RS09315	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS09315	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS09315	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL528_RS09315	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL528_RS09315	PWY-7205	CMP phosphorylation
AL528_RS09315	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL528_RS09315	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS09315	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS09315	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS09315	PWY-7224	purine deoxyribonucleosides salvage
AL528_RS09315	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS09315	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL528_RS09320	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL528_RS09325	PWY-6164	3-dehydroquinate biosynthesis I
AL528_RS09330	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL528_RS09430	PWY-6825	phosphatidylcholine biosynthesis V
AL528_RS09495	PWY-3841	folate transformations II
AL528_RS09495	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL528_RS09495	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL528_RS09495	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL528_RS09495	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL528_RS09495	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL528_RS09500	PWY-3841	folate transformations II
AL528_RS09500	PWY-6614	tetrahydrofolate biosynthesis
AL528_RS09540	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL528_RS09540	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL528_RS09540	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL528_RS09540	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL528_RS09560	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL528_RS09565	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL528_RS09685	PWY-2941	L-lysine biosynthesis II
AL528_RS09685	PWY-2942	L-lysine biosynthesis III
AL528_RS09685	PWY-5097	L-lysine biosynthesis VI
AL528_RS09690	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL528_RS09700	PWY-2941	L-lysine biosynthesis II
AL528_RS09705	PWY-2941	L-lysine biosynthesis II
AL528_RS09705	PWY-2942	L-lysine biosynthesis III
AL528_RS09705	PWY-5097	L-lysine biosynthesis VI
AL528_RS09710	PWY-2941	L-lysine biosynthesis II
AL528_RS09710	PWY-2942	L-lysine biosynthesis III
AL528_RS09710	PWY-5097	L-lysine biosynthesis VI
AL528_RS09715	PWY-2941	L-lysine biosynthesis II
AL528_RS09715	PWY-2942	L-lysine biosynthesis III
AL528_RS09715	PWY-5097	L-lysine biosynthesis VI
AL528_RS09715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS09715	PWY-6559	spermidine biosynthesis II
AL528_RS09715	PWY-6562	norspermidine biosynthesis
AL528_RS09715	PWY-7153	grixazone biosynthesis
AL528_RS09715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS09720	PWY-2941	L-lysine biosynthesis II
AL528_RS09720	PWY-2942	L-lysine biosynthesis III
AL528_RS09720	PWY-5097	L-lysine biosynthesis VI
AL528_RS09720	PWY-6559	spermidine biosynthesis II
AL528_RS09720	PWY-6562	norspermidine biosynthesis
AL528_RS09720	PWY-7153	grixazone biosynthesis
AL528_RS09825	PWY-5958	acridone alkaloid biosynthesis
AL528_RS09825	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL528_RS09825	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL528_RS09830	PWY-5958	acridone alkaloid biosynthesis
AL528_RS09830	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL528_RS09830	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL528_RS09860	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AL528_RS10010	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS10010	PWY-5723	Rubisco shunt
AL528_RS10010	PWY-6891	thiazole biosynthesis II (Bacillus)
AL528_RS10010	PWY-6892	thiazole biosynthesis I (E. coli)
AL528_RS10010	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS10010	PWY-7560	methylerythritol phosphate pathway II
AL528_RS10070	PWY-702	L-methionine biosynthesis II
AL528_RS10085	PWY-2941	L-lysine biosynthesis II
AL528_RS10085	PWY-2942	L-lysine biosynthesis III
AL528_RS10085	PWY-5097	L-lysine biosynthesis VI
AL528_RS10085	PWY-6559	spermidine biosynthesis II
AL528_RS10085	PWY-6562	norspermidine biosynthesis
AL528_RS10085	PWY-7153	grixazone biosynthesis
AL528_RS10140	PWY-381	nitrate reduction II (assimilatory)
AL528_RS10140	PWY-5675	nitrate reduction V (assimilatory)
AL528_RS10140	PWY-6549	L-glutamine biosynthesis III
AL528_RS10140	PWY-6963	ammonia assimilation cycle I
AL528_RS10140	PWY-6964	ammonia assimilation cycle II
AL528_RS10170	PWY-2781	<i>cis</i>-zeatin biosynthesis
AL528_RS10180	PWY-4261	glycerol degradation I
AL528_RS10180	PWY-6118	glycerol-3-phosphate shuttle
AL528_RS10180	PWY-6952	glycerophosphodiester degradation
AL528_RS10185	PWY-4261	glycerol degradation I
AL528_RS10255	PWY-5392	reductive TCA cycle II
AL528_RS10255	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS10285	PWY-5269	cardiolipin biosynthesis II
AL528_RS10285	PWY-5668	cardiolipin biosynthesis I
AL528_RS10340	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AL528_RS10340	PWY-6167	flavin biosynthesis II (archaea)
AL528_RS10340	PWY-6168	flavin biosynthesis III (fungi)
AL528_RS10405	PWY-5667	CDP-diacylglycerol biosynthesis I
AL528_RS10405	PWY-5981	CDP-diacylglycerol biosynthesis III
AL528_RS10470	PWY-5392	reductive TCA cycle II
AL528_RS10470	PWY-5537	pyruvate fermentation to acetate V
AL528_RS10470	PWY-5538	pyruvate fermentation to acetate VI
AL528_RS10470	PWY-5690	TCA cycle II (plants and fungi)
AL528_RS10470	PWY-5913	TCA cycle VI (obligate autotrophs)
AL528_RS10470	PWY-6728	methylaspartate cycle
AL528_RS10470	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS10470	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL528_RS10475	PWY-5392	reductive TCA cycle II
AL528_RS10475	PWY-5537	pyruvate fermentation to acetate V
AL528_RS10475	PWY-5538	pyruvate fermentation to acetate VI
AL528_RS10475	PWY-5690	TCA cycle II (plants and fungi)
AL528_RS10475	PWY-5913	TCA cycle VI (obligate autotrophs)
AL528_RS10475	PWY-6728	methylaspartate cycle
AL528_RS10475	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS10475	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL528_RS10505	PWY-6829	tRNA methylation (yeast)
AL528_RS10505	PWY-7285	methylwyosine biosynthesis
AL528_RS10505	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AL528_RS10560	PWY-5367	petroselinate biosynthesis
AL528_RS10560	PWY-5515	L-arabinose degradation II
AL528_RS10560	PWY-5525	D-glucuronate degradation I
AL528_RS10560	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL528_RS10560	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL528_RS10560	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL528_RS10560	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL528_RS10560	PWY-6113	superpathway of mycolate biosynthesis
AL528_RS10560	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL528_RS10560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL528_RS10560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL528_RS10560	PWY-7663	gondoate biosynthesis (anaerobic)
AL528_RS10560	PWY-7664	oleate biosynthesis IV (anaerobic)
AL528_RS10560	PWYG-321	mycolate biosynthesis
AL528_RS10565	PWY-4381	fatty acid biosynthesis initiation I
AL528_RS10565	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AL528_RS10565	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL528_RS10615	PWY-6898	thiamin salvage III
AL528_RS10615	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL528_RS10615	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL528_RS10615	PWY-7356	thiamin salvage IV (yeast)
AL528_RS10620	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL528_RS10620	PWY-5723	Rubisco shunt
AL528_RS10640	PWY-2201	folate transformations I
AL528_RS10645	PWY-6825	phosphatidylcholine biosynthesis V
AL528_RS10680	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL528_RS10705	PWY-5686	UMP biosynthesis
AL528_RS10710	PWY-5686	UMP biosynthesis
AL528_RS10715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS10715	PWY-5686	UMP biosynthesis
AL528_RS10715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS10720	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS10720	PWY-5686	UMP biosynthesis
AL528_RS10720	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS10725	PWY-5686	UMP biosynthesis
AL528_RS10730	PWY-5686	UMP biosynthesis
AL528_RS10740	PWY-7183	pyrimidine nucleobases salvage I
AL528_RS10785	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL528_RS10810	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS10810	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS10815	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL528_RS10815	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL528_RS10815	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL528_RS10830	PWY-2201	folate transformations I
AL528_RS11165	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AL528_RS11170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL528_RS11170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL528_RS11175	PWY-3781	aerobic respiration I (cytochrome c)
AL528_RS11175	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL528_RS11175	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL528_RS11175	PWY-5690	TCA cycle II (plants and fungi)
AL528_RS11175	PWY-6728	methylaspartate cycle
AL528_RS11175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS11175	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS11175	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL528_RS11180	PWY-3781	aerobic respiration I (cytochrome c)
AL528_RS11180	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL528_RS11180	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL528_RS11180	PWY-5690	TCA cycle II (plants and fungi)
AL528_RS11180	PWY-6728	methylaspartate cycle
AL528_RS11180	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL528_RS11180	PWY-7254	TCA cycle VII (acetate-producers)
AL528_RS11180	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL528_RS11265	PWY-6825	phosphatidylcholine biosynthesis V
AL528_RS11315	PWY-5750	itaconate biosynthesis
AL528_RS11315	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS11315	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AL528_RS11400	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL528_RS11400	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL528_RS11510	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11510	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL528_RS11510	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL528_RS11515	PWY-6123	inosine-5'-phosphate biosynthesis I
AL528_RS11515	PWY-6124	inosine-5'-phosphate biosynthesis II
AL528_RS11515	PWY-7234	inosine-5'-phosphate biosynthesis III
AL528_RS11520	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11520	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL528_RS11525	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11525	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL528_RS11525	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL528_RS11530	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11530	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL528_RS11530	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL528_RS11530	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL528_RS11535	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11535	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL528_RS11535	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL528_RS11540	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11540	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL528_RS11540	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL528_RS11545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL528_RS11545	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL528_RS11545	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL528_RS11550	PWY-6123	inosine-5'-phosphate biosynthesis I
AL528_RS11550	PWY-6124	inosine-5'-phosphate biosynthesis II
AL528_RS11550	PWY-7234	inosine-5'-phosphate biosynthesis III
AL528_RS11560	PWY-6123	inosine-5'-phosphate biosynthesis I
AL528_RS11560	PWY-7234	inosine-5'-phosphate biosynthesis III
AL528_RS11565	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL528_RS11565	PWY-2201	folate transformations I
AL528_RS11565	PWY-3841	folate transformations II
AL528_RS11565	PWY-5030	L-histidine degradation III
AL528_RS11565	PWY-5497	purine nucleobases degradation II (anaerobic)
AL528_RS11565	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL528_RS11585	PWY-3781	aerobic respiration I (cytochrome c)
AL528_RS11585	PWY-4521	arsenite oxidation I (respiratory)
AL528_RS11585	PWY-6692	Fe(II) oxidation
AL528_RS11585	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL528_RS11610	PWY-6749	CMP-legionaminate biosynthesis I
AL528_RS11655	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL528_RS11660	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL528_RS11665	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL528_RS11670	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL528_RS11670	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL528_RS11670	PWY-6406	salicylate biosynthesis I
AL528_RS11675	PWY-5839	menaquinol-7 biosynthesis
AL528_RS11675	PWY-5851	demethylmenaquinol-9 biosynthesis
AL528_RS11675	PWY-5852	demethylmenaquinol-8 biosynthesis I
AL528_RS11675	PWY-5853	demethylmenaquinol-6 biosynthesis I
AL528_RS11675	PWY-5890	menaquinol-10 biosynthesis
AL528_RS11675	PWY-5891	menaquinol-11 biosynthesis
AL528_RS11675	PWY-5892	menaquinol-12 biosynthesis
AL528_RS11675	PWY-5895	menaquinol-13 biosynthesis
AL528_RS11765	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL528_RS11765	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL528_RS11765	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL528_RS11765	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL528_RS11765	PWY-6778	laminaribiose degradation
AL528_RS11795	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL528_RS11795	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL528_RS11795	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL528_RS11795	PWY-6113	superpathway of mycolate biosynthesis
AL528_RS11795	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL528_RS11795	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL528_RS11795	PWY-7663	gondoate biosynthesis (anaerobic)
AL528_RS11795	PWY-7664	oleate biosynthesis IV (anaerobic)
AL528_RS11795	PWYG-321	mycolate biosynthesis
AL528_RS11815	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL528_RS11815	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL528_RS11815	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL528_RS11915	PWY-4381	fatty acid biosynthesis initiation I
AL528_RS11990	PWY-3801	sucrose degradation II (sucrose synthase)
AL528_RS11990	PWY-5054	sorbitol biosynthesis I
AL528_RS11990	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL528_RS11990	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL528_RS11990	PWY-5659	GDP-mannose biosynthesis
AL528_RS11990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS11990	PWY-621	sucrose degradation III (sucrose invertase)
AL528_RS11990	PWY-622	starch biosynthesis
AL528_RS11990	PWY-6981	chitin biosynthesis
AL528_RS11990	PWY-6992	1,5-anhydrofructose degradation
AL528_RS11990	PWY-7238	sucrose biosynthesis II
AL528_RS11990	PWY-7347	sucrose biosynthesis III
AL528_RS11990	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL528_RS11995	PWY-4983	L-citrulline-nitric oxide cycle
AL528_RS11995	PWY-4984	urea cycle
AL528_RS11995	PWY-5	canavanine biosynthesis
AL528_RS11995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS11995	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS12000	PWY-4983	L-citrulline-nitric oxide cycle
AL528_RS12000	PWY-4984	urea cycle
AL528_RS12000	PWY-5	canavanine biosynthesis
AL528_RS12000	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL528_RS12000	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL528_RS12015	PWY-3341	L-proline biosynthesis III
AL528_RS12015	PWY-4981	L-proline biosynthesis II (from arginine)
AL528_RS12015	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL528_RS12015	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL528_RS12175	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL528_RS12175	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL528_RS12195	PWY-723	alkylnitronates degradation
AL528_RS12215	PWY-6823	molybdenum cofactor biosynthesis
AL528_RS12215	PWY-6891	thiazole biosynthesis II (Bacillus)
AL528_RS12215	PWY-6892	thiazole biosynthesis I (E. coli)
AL528_RS12215	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL528_RS12290	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL528_RS12290	PWY-6416	quinate degradation II
AL528_RS12290	PWY-6707	gallate biosynthesis
AL528_RS12500	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS12500	PWY-1622	formaldehyde assimilation I (serine pathway)
AL528_RS12500	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL528_RS12500	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS12500	PWY-5723	Rubisco shunt
AL528_RS12500	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS12500	PWY-6886	1-butanol autotrophic biosynthesis
AL528_RS12500	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS12500	PWY-7003	glycerol degradation to butanol
AL528_RS12500	PWY-7124	ethylene biosynthesis V (engineered)
AL528_RS12500	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL528_RS12505	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS12505	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL528_RS12505	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS12505	PWY-5723	Rubisco shunt
AL528_RS12505	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS12505	PWY-6886	1-butanol autotrophic biosynthesis
AL528_RS12505	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS12505	PWY-7003	glycerol degradation to butanol
AL528_RS12505	PWY-7124	ethylene biosynthesis V (engineered)
AL528_RS12505	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL528_RS12510	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS12510	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS12510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL528_RS12510	PWY-7003	glycerol degradation to butanol
AL528_RS12515	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS12515	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS12515	PWY-6886	1-butanol autotrophic biosynthesis
AL528_RS12515	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS12515	PWY-7003	glycerol degradation to butanol
AL528_RS12520	PWY-1042	glycolysis IV (plant cytosol)
AL528_RS12520	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL528_RS12520	PWY-6901	superpathway of glucose and xylose degradation
AL528_RS12520	PWY-7003	glycerol degradation to butanol
AL528_RS12675	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL528_RS12675	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL528_RS12675	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
