AL528_RS00045 SM00382 ATPases associated with a variety of cellular activities AL528_RS00095 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL528_RS00115 SM00382 ATPases associated with a variety of cellular activities AL528_RS00120 SM00341 Helicase and RNase D C-terminal AL528_RS00120 SM00487 DEAD-like helicases superfamily AL528_RS00120 SM00490 helicase superfamily c-terminal domain AL528_RS00120 SM00956 AL528_RS00120 AL528_RS00125 SM00382 ATPases associated with a variety of cellular activities AL528_RS00140 SM00797 Allophanate hydrolase subunit 2 AL528_RS00145 SM00796 Allophanate hydrolase subunit 1 AL528_RS00200 SM01091 Transporter associated domain AL528_RS00220 SM00420 helix_turn_helix, Deoxyribose operon repressor AL528_RS00220 SM01134 AL528_RS00220 AL528_RS00275 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL528_RS00280 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS00285 SM00382 ATPases associated with a variety of cellular activities AL528_RS00290 SM00382 ATPases associated with a variety of cellular activities AL528_RS00320 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS00395 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS00405 SM00257 Lysin motif AL528_RS00420 SM00387 Histidine kinase-like ATPases AL528_RS00425 SM00448 cheY-homologous receiver domain AL528_RS00425 SM00862 Transcriptional regulatory protein, C terminal AL528_RS00460 SM01120 AL528_RS00460 AL528_RS00480 SM00382 ATPases associated with a variety of cellular activities AL528_RS00495 SM00382 ATPases associated with a variety of cellular activities AL528_RS00525 SM00382 ATPases associated with a variety of cellular activities AL528_RS00540 SM00529 Helix-turn-helix diphteria tox regulatory element AL528_RS00540 SM00899 AL528_RS00540 AL528_RS00545 SM00382 ATPases associated with a variety of cellular activities AL528_RS00630 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS00670 SM00478 endonuclease III AL528_RS00675 SM00836 DALR anticodon binding domain AL528_RS00675 SM01016 Arginyl tRNA synthetase N terminal dom AL528_RS00690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL528_RS00760 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS00780 SM00986 Uracil DNA glycosylase superfamily AL528_RS00780 SM00987 UreE urease accessory protein, C-terminal domain AL528_RS00795 SM01022 AL528_RS00795 AL528_RS00805 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS00840 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL528_RS00965 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL528_RS01000 SM00420 helix_turn_helix, Deoxyribose operon repressor AL528_RS01000 SM01134 AL528_RS01000 AL528_RS01020 SM00354 helix_turn _helix lactose operon repressor AL528_RS01095 SM00882 Coenzyme A transferase AL528_RS01100 SM00882 Coenzyme A transferase AL528_RS01140 SM00838 Elongation factor G C-terminus AL528_RS01140 SM00889 Elongation factor G, domain IV AL528_RS01160 SM00663 RNA polymerase I subunit A N-terminus AL528_RS01190 SM00649 Ribosomal protein L11/L12 AL528_RS01195 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL528_RS01195 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL528_RS01220 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL528_RS01230 SM00840 AL528_RS01230 AL528_RS01245 SM00670 Large family of predicted nucleotide-binding domains AL528_RS01250 SM00382 ATPases associated with a variety of cellular activities AL528_RS01255 SM00382 ATPases associated with a variety of cellular activities AL528_RS01255 SM01086 C-terminal, D2-small domain, of ClpB protein AL528_RS01290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS01385 SM00905 Dihydroneopterin aldolase AL528_RS01405 SM00382 ATPases associated with a variety of cellular activities AL528_RS01415 SM00977 TilS substrate C-terminal domain AL528_RS01420 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS01430 SM00363 S4 RNA-binding domain AL528_RS01445 SM00487 DEAD-like helicases superfamily AL528_RS01445 SM00490 helicase superfamily c-terminal domain AL528_RS01445 SM00982 AL528_RS01445 AL528_RS01445 SM01058 CarD-like/TRCF domain AL528_RS01460 SM01400 AL528_RS01460 AL528_RS01495 SM00650 Ribosomal RNA adenine dimethylases AL528_RS01500 SM00493 AL528_RS01500 AL528_RS01520 SM00465 GIY-YIG type nucleases (URI domain) AL528_RS01575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL528_RS01575 SM00493 AL528_RS01575 AL528_RS01585 SM00382 ATPases associated with a variety of cellular activities AL528_RS01600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS01600 SM00866 AL528_RS01600 AL528_RS01605 SM00642 Alpha-amylase domain AL528_RS01660 SM00257 Lysin motif AL528_RS01745 SM00357 Cold shock protein domain AL528_RS01850 SM00942 Primase C terminal 1 (PriCT-1) AL528_RS01865 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS01885 SM00116 Domain in cystathionine beta-synthase and other proteins. AL528_RS01885 SM01240 AL528_RS01885 AL528_RS01930 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS01955 SM00855 Phosphoglycerate mutase family AL528_RS02040 SM00344 helix_turn_helix ASNC type AL528_RS02045 SM00257 Lysin motif AL528_RS02045 SM00644 AL528_RS02045 AL528_RS02155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL528_RS02160 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS02225 SM00014 Acid phosphatase homologues AL528_RS02300 SM00470 ParB-like nuclease domain AL528_RS02375 SM00882 Coenzyme A transferase AL528_RS02410 SM00899 AL528_RS02410 AL528_RS02415 SM00953 AL528_RS02415 AL528_RS02420 SM00422 helix_turn_helix, mercury resistance AL528_RS02425 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS02435 SM00470 ParB-like nuclease domain AL528_RS02445 SM01228 AL528_RS02445 AL528_RS02465 SM00382 ATPases associated with a variety of cellular activities AL528_RS02465 SM00760 Bacterial dnaA protein helix-turn-helix domain AL528_RS02470 SM00480 DNA polymerase III beta subunit AL528_RS02485 SM00387 Histidine kinase-like ATPases AL528_RS02485 SM00433 TopoisomeraseII AL528_RS02490 SM00434 DNA Topoisomerase IV AL528_RS02530 SM00267 diguanylate cyclase AL528_RS02545 SM00788 Adenylosuccinate synthetase AL528_RS02565 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS02575 SM00448 cheY-homologous receiver domain AL528_RS02575 SM00862 Transcriptional regulatory protein, C terminal AL528_RS02580 SM00091 PAS domain AL528_RS02580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL528_RS02580 SM00387 Histidine kinase-like ATPases AL528_RS02580 SM00388 His Kinase A (phosphoacceptor) domain AL528_RS02595 SM00849 Metallo-beta-lactamase superfamily AL528_RS02675 SM00450 Rhodanese Homology Domain AL528_RS02680 SM00450 Rhodanese Homology Domain AL528_RS02680 SM00849 Metallo-beta-lactamase superfamily AL528_RS02690 SM00226 Low molecular weight phosphatase family AL528_RS02700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL528_RS02710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL528_RS02725 SM00422 helix_turn_helix, mercury resistance AL528_RS02765 SM01060 AL528_RS02765 AL528_RS02780 SM00422 helix_turn_helix, mercury resistance AL528_RS02795 SM00829 Enoylreductase AL528_RS02860 SM00507 HNH nucleases AL528_RS02935 SM00382 ATPases associated with a variety of cellular activities AL528_RS02990 SM00849 Metallo-beta-lactamase superfamily AL528_RS03000 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS03010 SM01038 Beta galactosidase small chain AL528_RS03045 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS03100 SM00450 Rhodanese Homology Domain AL528_RS03130 SM00382 ATPases associated with a variety of cellular activities AL528_RS03160 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS03310 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS03345 SM01001 AIR carboxylase AL528_RS03385 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS03395 SM00155 Phospholipase D. Active site motifs. AL528_RS03400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS03500 SM00854 Bacterial capsule synthesis protein PGA_cap AL528_RS03530 SM00382 ATPases associated with a variety of cellular activities AL528_RS03550 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL528_RS03625 SM00849 Metallo-beta-lactamase superfamily AL528_RS03630 SM00829 Enoylreductase AL528_RS03655 SM00062 Bacterial periplasmic substrate-binding proteins AL528_RS03655 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL528_RS03665 SM00382 ATPases associated with a variety of cellular activities AL528_RS03750 SM00988 UreE urease accessory protein, N-terminal domain AL528_RS03790 SM00382 ATPases associated with a variety of cellular activities AL528_RS03795 SM00382 ATPases associated with a variety of cellular activities AL528_RS03805 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS03880 SM00478 endonuclease III AL528_RS03930 SM00382 ATPases associated with a variety of cellular activities AL528_RS03965 SM01266 AL528_RS03965 AL528_RS04005 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS04145 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS04170 SM00854 Bacterial capsule synthesis protein PGA_cap AL528_RS04215 SM00382 ATPases associated with a variety of cellular activities AL528_RS04220 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS04225 SM00354 helix_turn _helix lactose operon repressor AL528_RS04240 SM00829 Enoylreductase AL528_RS04285 SM01130 AL528_RS04285 AL528_RS04320 SM01061 CAT RNA binding domain AL528_RS04335 SM00382 ATPases associated with a variety of cellular activities AL528_RS04340 SM00382 ATPases associated with a variety of cellular activities AL528_RS04360 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS04455 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS04455 SM00895 AL528_RS04455 AL528_RS04605 SM00382 ATPases associated with a variety of cellular activities AL528_RS04650 SM00116 Domain in cystathionine beta-synthase and other proteins. AL528_RS04650 SM00382 ATPases associated with a variety of cellular activities AL528_RS04690 SM00382 ATPases associated with a variety of cellular activities AL528_RS04710 SM00448 cheY-homologous receiver domain AL528_RS04710 SM00850 LytTr DNA-binding domain AL528_RS04715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL528_RS04715 SM00387 Histidine kinase-like ATPases AL528_RS04775 SM00871 Bacterial transcription activator, effector binding domain AL528_RS04800 SM00855 Phosphoglycerate mutase family AL528_RS04810 SM01022 AL528_RS04810 AL528_RS04845 SM00867 YceI-like domain AL528_RS04910 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS04915 SM00857 Resolvase, N terminal domain AL528_RS04930 SM00857 Resolvase, N terminal domain AL528_RS04940 SM00857 Resolvase, N terminal domain AL528_RS04975 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS04980 SM00644 AL528_RS04980 AL528_RS05025 SM00420 helix_turn_helix, Deoxyribose operon repressor AL528_RS05025 SM01134 AL528_RS05025 AL528_RS05030 SM00829 Enoylreductase AL528_RS05040 SM01120 AL528_RS05040 AL528_RS05075 SM00829 Enoylreductase AL528_RS05110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL528_RS05110 SM00387 Histidine kinase-like ATPases AL528_RS05110 SM00388 His Kinase A (phosphoacceptor) domain AL528_RS05115 SM00448 cheY-homologous receiver domain AL528_RS05125 SM00382 ATPases associated with a variety of cellular activities AL528_RS05135 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS05230 SM00382 ATPases associated with a variety of cellular activities AL528_RS05295 SM00903 Flavin reductase like domain AL528_RS05370 SM00098 Alkaline phosphatase homologues AL528_RS05400 SM00420 helix_turn_helix, Deoxyribose operon repressor AL528_RS05415 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL528_RS05415 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL528_RS05430 SM00047 Lysozyme subfamily 2 AL528_RS05510 SM00062 Bacterial periplasmic substrate-binding proteins AL528_RS05515 SM00382 ATPases associated with a variety of cellular activities AL528_RS05545 SM00354 helix_turn _helix lactose operon repressor AL528_RS05575 SM00382 ATPases associated with a variety of cellular activities AL528_RS05595 SM00852 Probable molybdopterin binding domain AL528_RS05605 SM00852 Probable molybdopterin binding domain AL528_RS05630 SM00729 Elongator protein 3, MiaB family, Radical SAM AL528_RS05645 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS05695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL528_RS05695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL528_RS05695 SM00493 AL528_RS05695 AL528_RS05710 SM01403 AL528_RS05710 AL528_RS05730 SM01382 AL528_RS05730 AL528_RS05730 SM01383 AL528_RS05730 AL528_RS05745 SM00322 K homology RNA-binding domain AL528_RS05765 SM01374 AL528_RS05765 AL528_RS05770 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL528_RS05825 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS05845 SM00662 RNA polymerases D AL528_RS05855 SM00382 ATPases associated with a variety of cellular activities AL528_RS05860 SM00382 ATPases associated with a variety of cellular activities AL528_RS05895 SM00829 Enoylreductase AL528_RS05900 SM00829 Enoylreductase AL528_RS06100 SM00382 ATPases associated with a variety of cellular activities AL528_RS06125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL528_RS06135 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS06135 SM00895 AL528_RS06135 AL528_RS06180 SM01133 AL528_RS06180 AL528_RS06185 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AL528_RS06260 SM00357 Cold shock protein domain AL528_RS06260 SM00382 ATPases associated with a variety of cellular activities AL528_RS06260 SM00959 Rho termination factor, N-terminal domain AL528_RS06275 SM00937 AL528_RS06275 AL528_RS06290 SM00226 Low molecular weight phosphatase family AL528_RS06350 SM00382 ATPases associated with a variety of cellular activities AL528_RS06415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL528_RS06420 SM00155 Phospholipase D. Active site motifs. AL528_RS06450 SM00487 DEAD-like helicases superfamily AL528_RS06450 SM00490 helicase superfamily c-terminal domain AL528_RS06475 SM01005 Alanine racemase, C-terminal domain AL528_RS06490 SM00331 Sigma factor PP2C-like phosphatases AL528_RS06490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL528_RS06510 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS06510 SM00732 Likely ribonuclease with RNase H fold. AL528_RS06515 SM00731 SprT homologues. AL528_RS06565 SM01329 AL528_RS06565 AL528_RS06570 SM00917 LeuA allosteric (dimerisation) domain AL528_RS06620 SM00534 ATPase domain of DNA mismatch repair MUTS family AL528_RS06625 SM00382 ATPases associated with a variety of cellular activities AL528_RS06630 SM00881 CoA binding domain AL528_RS06645 SM00354 helix_turn _helix lactose operon repressor AL528_RS06650 SM00640 Glycosyl hydrolases family 32 AL528_RS06660 SM00448 cheY-homologous receiver domain AL528_RS06660 SM00850 LytTr DNA-binding domain AL528_RS06670 SM00794 Staphylococcal AgrD protein AL528_RS06675 SM00793 Accessory gene regulator B AL528_RS06700 SM00883 Chaperonin 10 Kd subunit AL528_RS06715 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS06740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL528_RS06745 SM00382 ATPases associated with a variety of cellular activities AL528_RS06760 SM00382 ATPases associated with a variety of cellular activities AL528_RS06810 SM01131 AL528_RS06810 AL528_RS06820 SM00710 Parallel beta-helix repeats AL528_RS06860 SM00998 Adenylosuccinate lyase C-terminus AL528_RS06885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL528_RS06885 SM00292 breast cancer carboxy-terminal domain AL528_RS06885 SM00532 Ligase N family AL528_RS06910 SM00845 GatB domain AL528_RS06915 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL528_RS06935 SM00479 AL528_RS06935 AL528_RS06985 SM00387 Histidine kinase-like ATPases AL528_RS06990 SM00421 helix_turn_helix, Lux Regulon AL528_RS06990 SM00448 cheY-homologous receiver domain AL528_RS07005 SM00226 Low molecular weight phosphatase family AL528_RS07065 SM00478 endonuclease III AL528_RS07075 SM00382 ATPases associated with a variety of cellular activities AL528_RS07260 SM00062 Bacterial periplasmic substrate-binding proteins AL528_RS07260 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL528_RS07265 SM00382 ATPases associated with a variety of cellular activities AL528_RS07270 SM00567 E-Z type HEAT repeats AL528_RS07310 SM00421 helix_turn_helix, Lux Regulon AL528_RS07310 SM00448 cheY-homologous receiver domain AL528_RS07340 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS07365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL528_RS07390 SM00382 ATPases associated with a variety of cellular activities AL528_RS07480 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS07485 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS07665 SM00507 HNH nucleases AL528_RS07755 SM00710 Parallel beta-helix repeats AL528_RS07795 SM00646 AL528_RS07795 AL528_RS07815 SM01234 AL528_RS07815 AL528_RS07895 SM00047 Lysozyme subfamily 2 AL528_RS07965 SM00729 Elongator protein 3, MiaB family, Radical SAM AL528_RS07980 SM00450 Rhodanese Homology Domain AL528_RS07995 SM00363 S4 RNA-binding domain AL528_RS08025 SM00849 Metallo-beta-lactamase superfamily AL528_RS08055 SM00843 AL528_RS08055 AL528_RS08075 SM00830 Chorismate mutase type II AL528_RS08080 SM00354 helix_turn _helix lactose operon repressor AL528_RS08110 SM00363 S4 RNA-binding domain AL528_RS08115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL528_RS08120 SM00563 Phosphate acyltransferases AL528_RS08160 SM00363 S4 RNA-binding domain AL528_RS08160 SM01390 AL528_RS08160 AL528_RS08165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL528_RS08180 SM00981 AL528_RS08180 AL528_RS08225 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL528_RS08225 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL528_RS08240 SM00849 Metallo-beta-lactamase superfamily AL528_RS08250 SM00116 Domain in cystathionine beta-synthase and other proteins. AL528_RS08260 SM00481 DNA polymerase alpha chain like domain AL528_RS08265 SM00919 Malic enzyme, NAD binding domain AL528_RS08265 SM01274 AL528_RS08265 AL528_RS08300 SM01329 AL528_RS08300 AL528_RS08305 SM00448 cheY-homologous receiver domain AL528_RS08305 SM00862 Transcriptional regulatory protein, C terminal AL528_RS08310 SM00387 Histidine kinase-like ATPases AL528_RS08310 SM00388 His Kinase A (phosphoacceptor) domain AL528_RS08315 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL528_RS08315 SM00474 3'-5' exonuclease AL528_RS08315 SM00475 5'-3' exonuclease AL528_RS08315 SM00482 DNA polymerase A domain AL528_RS08320 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL528_RS08320 SM01232 AL528_RS08320 AL528_RS08330 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL528_RS08350 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL528_RS08390 SM00382 ATPases associated with a variety of cellular activities AL528_RS08390 SM00994 ClpX C4-type zinc finger AL528_RS08390 SM01086 C-terminal, D2-small domain, of ClpB protein AL528_RS08420 SM01004 Delta-aminolevulinic acid dehydratase AL528_RS08515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL528_RS08520 SM00382 ATPases associated with a variety of cellular activities AL528_RS08535 SM01323 AL528_RS08535 AL528_RS08555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL528_RS08555 SM00954 Region found in RelA / SpoT proteins AL528_RS08565 SM00287 Bacterial SH3 domain homologues AL528_RS08565 SM00646 AL528_RS08565 AL528_RS08590 SM00382 ATPases associated with a variety of cellular activities AL528_RS08615 SM00382 ATPases associated with a variety of cellular activities AL528_RS08630 SM00028 Tetratricopeptide repeats AL528_RS08635 SM00382 ATPases associated with a variety of cellular activities AL528_RS08640 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL528_RS08650 SM00732 Likely ribonuclease with RNase H fold. AL528_RS08685 SM00796 Allophanate hydrolase subunit 1 AL528_RS08690 SM00797 Allophanate hydrolase subunit 2 AL528_RS08700 SM00878 Biotin carboxylase C-terminal domain AL528_RS08735 SM01103 AL528_RS08735 AL528_RS08745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL528_RS08760 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL528_RS08770 SM00849 Metallo-beta-lactamase superfamily AL528_RS08785 SM00838 Elongation factor G C-terminus AL528_RS08790 SM00729 Elongator protein 3, MiaB family, Radical SAM AL528_RS08810 SM00271 DnaJ molecular chaperone homology domain AL528_RS08880 SM00116 Domain in cystathionine beta-synthase and other proteins. AL528_RS08890 SM00400 zinc finger AL528_RS08890 SM00493 AL528_RS08890 AL528_RS08910 SM00487 DEAD-like helicases superfamily AL528_RS08910 SM00490 helicase superfamily c-terminal domain AL528_RS08915 SM00518 AP endonuclease family 2 AL528_RS08920 SM00382 ATPases associated with a variety of cellular activities AL528_RS08975 SM00849 Metallo-beta-lactamase superfamily AL528_RS09035 SM00450 Rhodanese Homology Domain AL528_RS09060 SM00841 Elongation factor P, C-terminal AL528_RS09060 SM01185 AL528_RS09060 AL528_RS09070 SM00878 Biotin carboxylase C-terminal domain AL528_RS09125 SM00861 Transketolase, pyrimidine binding domain AL528_RS09150 SM01350 AL528_RS09150 AL528_RS09155 SM00354 helix_turn _helix lactose operon repressor AL528_RS09160 SM00642 Alpha-amylase domain AL528_RS09165 SM00342 helix_turn_helix, arabinose operon control protein AL528_RS09165 SM00871 Bacterial transcription activator, effector binding domain AL528_RS09225 SM00363 S4 RNA-binding domain AL528_RS09230 SM00448 cheY-homologous receiver domain AL528_RS09230 SM00862 Transcriptional regulatory protein, C terminal AL528_RS09235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL528_RS09235 SM00387 Histidine kinase-like ATPases AL528_RS09235 SM00388 His Kinase A (phosphoacceptor) domain AL528_RS09255 SM00487 DEAD-like helicases superfamily AL528_RS09255 SM00490 helicase superfamily c-terminal domain AL528_RS09260 SM00257 Lysin motif AL528_RS09270 SM00870 AL528_RS09270 AL528_RS09280 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS09295 SM00411 bacterial (prokaryotic) histone like domain AL528_RS09315 SM00562 AL528_RS09315 AL528_RS09335 SM00028 Tetratricopeptide repeats AL528_RS09340 SM00914 AL528_RS09340 AL528_RS09375 SM00479 AL528_RS09375 AL528_RS09375 SM00491 AL528_RS09375 AL528_RS09390 SM00478 endonuclease III AL528_RS09430 SM00981 AL528_RS09430 AL528_RS09445 SM00644 AL528_RS09445 AL528_RS09455 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL528_RS09455 SM00475 5'-3' exonuclease AL528_RS09480 SM00932 Scaffold protein Nfu/NifU N terminal AL528_RS09485 SM00567 E-Z type HEAT repeats AL528_RS09485 SM00932 Scaffold protein Nfu/NifU N terminal AL528_RS09530 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL528_RS09530 SM00245 tail specific protease AL528_RS09545 SM00014 Acid phosphatase homologues AL528_RS09550 SM00448 cheY-homologous receiver domain AL528_RS09550 SM00862 Transcriptional regulatory protein, C terminal AL528_RS09555 SM00387 Histidine kinase-like ATPases AL528_RS09555 SM00388 His Kinase A (phosphoacceptor) domain AL528_RS09560 SM00861 Transketolase, pyrimidine binding domain AL528_RS09575 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS09615 SM00382 ATPases associated with a variety of cellular activities AL528_RS09640 SM00382 ATPases associated with a variety of cellular activities AL528_RS09645 SM00327 von Willebrand factor (vWF) type A domain AL528_RS09680 SM00357 Cold shock protein domain AL528_RS09690 SM01005 Alanine racemase, C-terminal domain AL528_RS09710 SM01130 AL528_RS09710 AL528_RS09715 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL528_RS09730 SM00382 ATPases associated with a variety of cellular activities AL528_RS09755 SM00382 ATPases associated with a variety of cellular activities AL528_RS09895 SM00382 ATPases associated with a variety of cellular activities AL528_RS09905 SM00354 helix_turn _helix lactose operon repressor AL528_RS09930 SM01061 CAT RNA binding domain AL528_RS09940 SM00434 DNA Topoisomerase IV AL528_RS09945 SM00387 Histidine kinase-like ATPases AL528_RS09945 SM00433 TopoisomeraseII AL528_RS09950 SM01207 AL528_RS09950 AL528_RS10010 SM00861 Transketolase, pyrimidine binding domain AL528_RS10035 SM01240 AL528_RS10035 AL528_RS10050 SM01060 AL528_RS10050 AL528_RS10105 SM00318 Staphylococcal nuclease homologues AL528_RS10115 SM00421 helix_turn_helix, Lux Regulon AL528_RS10115 SM00448 cheY-homologous receiver domain AL528_RS10120 SM00387 Histidine kinase-like ATPases AL528_RS10130 SM00382 ATPases associated with a variety of cellular activities AL528_RS10140 SM01230 AL528_RS10140 AL528_RS10145 SM00422 helix_turn_helix, mercury resistance AL528_RS10205 SM00853 MutL C terminal dimerisation domain AL528_RS10205 SM01340 AL528_RS10205 AL528_RS10210 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL528_RS10210 SM00534 ATPase domain of DNA mismatch repair MUTS family AL528_RS10225 SM00729 Elongator protein 3, MiaB family, Radical SAM AL528_RS10270 SM00322 K homology RNA-binding domain AL528_RS10270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL528_RS10275 SM00382 ATPases associated with a variety of cellular activities AL528_RS10280 SM00852 Probable molybdopterin binding domain AL528_RS10315 SM00866 AL528_RS10315 AL528_RS10320 SM00382 ATPases associated with a variety of cellular activities AL528_RS10320 SM00843 AL528_RS10320 AL528_RS10325 SM00849 Metallo-beta-lactamase superfamily AL528_RS10330 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS10330 SM00322 K homology RNA-binding domain AL528_RS10335 SM01387 AL528_RS10335 AL528_RS10340 SM00904 Riboflavin kinase AL528_RS10380 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS10380 SM00322 K homology RNA-binding domain AL528_RS10390 SM00479 AL528_RS10390 AL528_RS10390 SM00481 DNA polymerase alpha chain like domain AL528_RS10400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL528_RS10440 SM00382 ATPases associated with a variety of cellular activities AL528_RS10440 SM01086 C-terminal, D2-small domain, of ClpB protein AL528_RS10460 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL528_RS10460 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL528_RS10460 SM00493 AL528_RS10460 AL528_RS10470 SM00881 CoA binding domain AL528_RS10530 SM00382 ATPases associated with a variety of cellular activities AL528_RS10530 SM00962 SRP54-type protein, GTPase domain AL528_RS10530 SM00963 SRP54-type protein, helical bundle domain AL528_RS10540 SM00382 ATPases associated with a variety of cellular activities AL528_RS10540 SM00962 SRP54-type protein, GTPase domain AL528_RS10540 SM00963 SRP54-type protein, helical bundle domain AL528_RS10545 SM00968 SMC proteins Flexible Hinge Domain AL528_RS10550 SM00358 Double-stranded RNA binding motif AL528_RS10550 SM00535 Ribonuclease III family AL528_RS10560 SM00822 AL528_RS10560 AL528_RS10565 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL528_RS10585 SM00487 DEAD-like helicases superfamily AL528_RS10585 SM00490 helicase superfamily c-terminal domain AL528_RS10600 SM01120 AL528_RS10600 AL528_RS10600 SM01121 AL528_RS10600 AL528_RS10615 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AL528_RS10630 SM00220 Serine/Threonine protein kinases, catalytic domain AL528_RS10630 SM00740 AL528_RS10630 AL528_RS10635 SM00331 Sigma factor PP2C-like phosphatases AL528_RS10635 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL528_RS10665 SM00487 DEAD-like helicases superfamily AL528_RS10665 SM00490 helicase superfamily c-terminal domain AL528_RS10675 SM01409 AL528_RS10675 AL528_RS10680 SM00072 Guanylate kinase homologues. AL528_RS10710 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL528_RS10715 SM00851 MGS-like domain AL528_RS10715 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL528_RS10715 SM01209 AL528_RS10715 AL528_RS10720 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL528_RS10745 SM00363 S4 RNA-binding domain AL528_RS10770 SM00363 S4 RNA-binding domain AL528_RS10795 SM00864 Tubulin/FtsZ family, GTPase domain AL528_RS10795 SM00865 Tubulin/FtsZ family, C-terminal domain AL528_RS10800 SM00842 Cell division protein FtsA AL528_RS10820 SM00740 AL528_RS10820 AL528_RS10885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL528_RS10930 SM00644 AL528_RS10930 AL528_RS10945 SM00047 Lysozyme subfamily 2 AL528_RS11015 SM00959 Rho termination factor, N-terminal domain AL528_RS11130 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS11135 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS11140 SM00513 Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation AL528_RS11190 SM00465 GIY-YIG type nucleases (URI domain) AL528_RS11200 SM00463 Small MutS-related domain AL528_RS11200 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL528_RS11200 SM00534 ATPase domain of DNA mismatch repair MUTS family AL528_RS11205 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL528_RS11205 SM00481 DNA polymerase alpha chain like domain AL528_RS11205 SM00483 DNA polymerase X family AL528_RS11225 SM00873 B3/4 domain AL528_RS11225 SM00874 tRNA synthetase B5 domain AL528_RS11225 SM00896 Ferredoxin-fold anticodon binding domain AL528_RS11235 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL528_RS11315 SM00878 Biotin carboxylase C-terminal domain AL528_RS11335 SM00838 Elongation factor G C-terminus AL528_RS11385 SM00382 ATPases associated with a variety of cellular activities AL528_RS11390 SM00530 Helix-turn-helix XRE-family like proteins AL528_RS11410 SM00861 Transketolase, pyrimidine binding domain AL528_RS11440 SM00849 Metallo-beta-lactamase superfamily AL528_RS11500 SM00382 ATPases associated with a variety of cellular activities AL528_RS11510 SM01209 AL528_RS11510 AL528_RS11510 SM01210 AL528_RS11510 AL528_RS11515 SM00798 AICARFT/IMPCHase bienzyme AL528_RS11515 SM00851 MGS-like domain AL528_RS11540 SM01211 AL528_RS11540 AL528_RS11560 SM01001 AIR carboxylase AL528_RS11630 SM00047 Lysozyme subfamily 2 AL528_RS11630 SM00644 AL528_RS11630 AL528_RS11635 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS11650 SM00347 helix_turn_helix multiple antibiotic resistance protein AL528_RS11710 SM00914 AL528_RS11710 AL528_RS11740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL528_RS11805 SM00116 Domain in cystathionine beta-synthase and other proteins. AL528_RS11805 SM00924 MgtE intracellular N domain AL528_RS11820 SM00954 Region found in RelA / SpoT proteins AL528_RS11830 SM01118 AL528_RS11830 AL528_RS11880 SM00382 ATPases associated with a variety of cellular activities AL528_RS11885 SM00382 ATPases associated with a variety of cellular activities AL528_RS11910 SM00825 Beta-ketoacyl synthase AL528_RS11925 SM00382 ATPases associated with a variety of cellular activities AL528_RS11925 SM01086 C-terminal, D2-small domain, of ClpB protein AL528_RS12010 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL528_RS12025 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS12035 SM01298 AL528_RS12035 AL528_RS12175 SM00729 Elongator protein 3, MiaB family, Radical SAM AL528_RS12225 SM00382 ATPases associated with a variety of cellular activities AL528_RS12255 SM00382 ATPases associated with a variety of cellular activities AL528_RS12255 SM00930 AL528_RS12255 AL528_RS12265 SM00493 AL528_RS12265 AL528_RS12475 SM00316 Ribosomal protein S1-like RNA-binding domain AL528_RS12475 SM00357 Cold shock protein domain AL528_RS12475 SM00955 AL528_RS12475 AL528_RS12500 SM01192 AL528_RS12500 AL528_RS12500 SM01193 AL528_RS12500 AL528_RS12520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL528_RS12595 SM00028 Tetratricopeptide repeats AL528_RS12620 SM00487 DEAD-like helicases superfamily AL528_RS12620 SM00490 helicase superfamily c-terminal domain AL528_RS12635 SM00257 Lysin motif AL528_RS12640 SM00937 AL528_RS12640 AL528_RS12645 SM00957 SecA DEAD-like domain AL528_RS12645 SM00958 SecA preprotein cross-linking domain AL528_RS12660 SM00487 DEAD-like helicases superfamily AL528_RS12660 SM00490 helicase superfamily c-terminal domain AL528_RS12680 SM00267 diguanylate cyclase AL528_RS12970 SM00487 DEAD-like helicases superfamily AL528_RS12970 SM00490 helicase superfamily c-terminal domain