CEQ33_RS00065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS00085 SM00450 Rhodanese Homology Domain CEQ33_RS00090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS00100 SM00226 Low molecular weight phosphatase family CEQ33_RS00120 SM00857 Resolvase, N terminal domain CEQ33_RS00150 SM00047 Lysozyme subfamily 2 CEQ33_RS00160 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS00255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS00290 SM00450 Rhodanese Homology Domain CEQ33_RS00295 SM00450 Rhodanese Homology Domain CEQ33_RS00295 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS00305 SM00857 Resolvase, N terminal domain CEQ33_RS00345 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ33_RS00345 SM00876 Biotin and Thiamin Synthesis associated domain CEQ33_RS00370 SM00829 Enoylreductase CEQ33_RS00390 SM01060 CEQ33_RS00390 CEQ33_RS00405 SM00857 Resolvase, N terminal domain CEQ33_RS00630 SM00062 Bacterial periplasmic substrate-binding proteins CEQ33_RS00630 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEQ33_RS00635 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS00640 SM00567 E-Z type HEAT repeats CEQ33_RS00680 SM00421 helix_turn_helix, Lux Regulon CEQ33_RS00680 SM00448 cheY-homologous receiver domain CEQ33_RS00705 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS00730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ33_RS00755 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS00845 SM01234 CEQ33_RS00845 CEQ33_RS00925 SM00047 Lysozyme subfamily 2 CEQ33_RS00990 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ33_RS01005 SM00450 Rhodanese Homology Domain CEQ33_RS01020 SM00363 S4 RNA-binding domain CEQ33_RS01050 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS01080 SM00843 CEQ33_RS01080 CEQ33_RS01100 SM00830 Chorismate mutase type II CEQ33_RS01105 SM00354 helix_turn _helix lactose operon repressor CEQ33_RS01135 SM00363 S4 RNA-binding domain CEQ33_RS01140 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ33_RS01145 SM00563 Phosphate acyltransferases CEQ33_RS01185 SM00363 S4 RNA-binding domain CEQ33_RS01185 SM01390 CEQ33_RS01185 CEQ33_RS01195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEQ33_RS01210 SM00981 CEQ33_RS01210 CEQ33_RS01255 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CEQ33_RS01255 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CEQ33_RS01270 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS01280 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ33_RS01290 SM00481 DNA polymerase alpha chain like domain CEQ33_RS01295 SM00919 Malic enzyme, NAD binding domain CEQ33_RS01295 SM01274 CEQ33_RS01295 CEQ33_RS01330 SM01329 CEQ33_RS01330 CEQ33_RS01335 SM00448 cheY-homologous receiver domain CEQ33_RS01335 SM00862 Transcriptional regulatory protein, C terminal CEQ33_RS01340 SM00387 Histidine kinase-like ATPases CEQ33_RS01340 SM00388 His Kinase A (phosphoacceptor) domain CEQ33_RS01345 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEQ33_RS01345 SM00474 3'-5' exonuclease CEQ33_RS01345 SM00475 5'-3' exonuclease CEQ33_RS01345 SM00482 DNA polymerase A domain CEQ33_RS01350 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CEQ33_RS01350 SM01232 CEQ33_RS01350 CEQ33_RS01360 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ33_RS01380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEQ33_RS01420 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS01420 SM00994 ClpX C4-type zinc finger CEQ33_RS01420 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ33_RS01450 SM01004 Delta-aminolevulinic acid dehydratase CEQ33_RS01550 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ33_RS01555 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS01570 SM01323 CEQ33_RS01570 CEQ33_RS01590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ33_RS01590 SM00954 Region found in RelA / SpoT proteins CEQ33_RS01600 SM00287 Bacterial SH3 domain homologues CEQ33_RS01600 SM00646 CEQ33_RS01600 CEQ33_RS01625 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS01655 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS01670 SM00028 Tetratricopeptide repeats CEQ33_RS01675 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS01680 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEQ33_RS01690 SM00732 Likely ribonuclease with RNase H fold. CEQ33_RS01725 SM00796 Allophanate hydrolase subunit 1 CEQ33_RS01730 SM00797 Allophanate hydrolase subunit 2 CEQ33_RS01740 SM00878 Biotin carboxylase C-terminal domain CEQ33_RS01775 SM01103 CEQ33_RS01775 CEQ33_RS01785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ33_RS01800 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ33_RS01810 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS01825 SM00838 Elongation factor G C-terminus CEQ33_RS01830 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ33_RS01850 SM00271 DnaJ molecular chaperone homology domain CEQ33_RS01920 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ33_RS01930 SM00400 zinc finger CEQ33_RS01930 SM00493 CEQ33_RS01930 CEQ33_RS01950 SM00487 DEAD-like helicases superfamily CEQ33_RS01950 SM00490 helicase superfamily c-terminal domain CEQ33_RS01955 SM00518 AP endonuclease family 2 CEQ33_RS01960 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS01995 SM00028 Tetratricopeptide repeats CEQ33_RS02015 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS02075 SM00450 Rhodanese Homology Domain CEQ33_RS02100 SM00841 Elongation factor P, C-terminal CEQ33_RS02100 SM01185 CEQ33_RS02100 CEQ33_RS02110 SM00878 Biotin carboxylase C-terminal domain CEQ33_RS02170 SM00861 Transketolase, pyrimidine binding domain CEQ33_RS02195 SM01350 CEQ33_RS02195 CEQ33_RS02200 SM00354 helix_turn _helix lactose operon repressor CEQ33_RS02205 SM00642 Alpha-amylase domain CEQ33_RS02210 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS02210 SM00871 Bacterial transcription activator, effector binding domain CEQ33_RS02270 SM00363 S4 RNA-binding domain CEQ33_RS02275 SM00448 cheY-homologous receiver domain CEQ33_RS02275 SM00862 Transcriptional regulatory protein, C terminal CEQ33_RS02280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ33_RS02280 SM00387 Histidine kinase-like ATPases CEQ33_RS02280 SM00388 His Kinase A (phosphoacceptor) domain CEQ33_RS02300 SM00487 DEAD-like helicases superfamily CEQ33_RS02300 SM00490 helicase superfamily c-terminal domain CEQ33_RS02305 SM00257 Lysin motif CEQ33_RS02315 SM00870 CEQ33_RS02315 CEQ33_RS02325 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS02340 SM00411 bacterial (prokaryotic) histone like domain CEQ33_RS02360 SM00562 CEQ33_RS02360 CEQ33_RS02380 SM00028 Tetratricopeptide repeats CEQ33_RS02385 SM00914 CEQ33_RS02385 CEQ33_RS02420 SM00479 CEQ33_RS02420 CEQ33_RS02420 SM00491 CEQ33_RS02420 CEQ33_RS02435 SM00478 endonuclease III CEQ33_RS02475 SM00981 CEQ33_RS02475 CEQ33_RS02490 SM00644 CEQ33_RS02490 CEQ33_RS02500 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEQ33_RS02500 SM00475 5'-3' exonuclease CEQ33_RS02525 SM00932 Scaffold protein Nfu/NifU N terminal CEQ33_RS02530 SM00567 E-Z type HEAT repeats CEQ33_RS02530 SM00932 Scaffold protein Nfu/NifU N terminal CEQ33_RS02575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ33_RS02575 SM00245 tail specific protease CEQ33_RS02590 SM00014 Acid phosphatase homologues CEQ33_RS02595 SM00448 cheY-homologous receiver domain CEQ33_RS02595 SM00862 Transcriptional regulatory protein, C terminal CEQ33_RS02600 SM00387 Histidine kinase-like ATPases CEQ33_RS02600 SM00388 His Kinase A (phosphoacceptor) domain CEQ33_RS02605 SM00861 Transketolase, pyrimidine binding domain CEQ33_RS02620 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS02660 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS02685 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS02690 SM00327 von Willebrand factor (vWF) type A domain CEQ33_RS02725 SM00357 Cold shock protein domain CEQ33_RS02735 SM01005 Alanine racemase, C-terminal domain CEQ33_RS02755 SM01130 CEQ33_RS02755 CEQ33_RS02760 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ33_RS02775 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS02800 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS02945 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS02985 SM01061 CAT RNA binding domain CEQ33_RS02995 SM00434 DNA Topoisomerase IV CEQ33_RS03000 SM00387 Histidine kinase-like ATPases CEQ33_RS03000 SM00433 TopoisomeraseII CEQ33_RS03005 SM01207 CEQ33_RS03005 CEQ33_RS03060 SM00861 Transketolase, pyrimidine binding domain CEQ33_RS03085 SM01240 CEQ33_RS03085 CEQ33_RS03115 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03120 SM00062 Bacterial periplasmic substrate-binding proteins CEQ33_RS03145 SM01060 CEQ33_RS03145 CEQ33_RS03200 SM00318 Staphylococcal nuclease homologues CEQ33_RS03210 SM00421 helix_turn_helix, Lux Regulon CEQ33_RS03210 SM00448 cheY-homologous receiver domain CEQ33_RS03215 SM00387 Histidine kinase-like ATPases CEQ33_RS03225 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03235 SM01230 CEQ33_RS03235 CEQ33_RS03240 SM00422 helix_turn_helix, mercury resistance CEQ33_RS03300 SM00853 MutL C terminal dimerisation domain CEQ33_RS03300 SM01340 CEQ33_RS03300 CEQ33_RS03305 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEQ33_RS03305 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ33_RS03320 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ33_RS03365 SM00322 K homology RNA-binding domain CEQ33_RS03365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ33_RS03370 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03375 SM00852 Probable molybdopterin binding domain CEQ33_RS03410 SM00866 CEQ33_RS03410 CEQ33_RS03415 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03415 SM00843 CEQ33_RS03415 CEQ33_RS03420 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS03425 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS03425 SM00322 K homology RNA-binding domain CEQ33_RS03430 SM01387 CEQ33_RS03430 CEQ33_RS03435 SM00904 Riboflavin kinase CEQ33_RS03475 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS03475 SM00322 K homology RNA-binding domain CEQ33_RS03485 SM00479 CEQ33_RS03485 CEQ33_RS03485 SM00481 DNA polymerase alpha chain like domain CEQ33_RS03495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ33_RS03535 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03535 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ33_RS03555 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEQ33_RS03555 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEQ33_RS03555 SM00493 CEQ33_RS03555 CEQ33_RS03565 SM00881 CoA binding domain CEQ33_RS03625 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03625 SM00962 SRP54-type protein, GTPase domain CEQ33_RS03625 SM00963 SRP54-type protein, helical bundle domain CEQ33_RS03635 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS03635 SM00962 SRP54-type protein, GTPase domain CEQ33_RS03635 SM00963 SRP54-type protein, helical bundle domain CEQ33_RS03640 SM00968 SMC proteins Flexible Hinge Domain CEQ33_RS03645 SM00358 Double-stranded RNA binding motif CEQ33_RS03645 SM00535 Ribonuclease III family CEQ33_RS03655 SM00822 CEQ33_RS03655 CEQ33_RS03660 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CEQ33_RS03680 SM00487 DEAD-like helicases superfamily CEQ33_RS03680 SM00490 helicase superfamily c-terminal domain CEQ33_RS03695 SM01120 CEQ33_RS03695 CEQ33_RS03695 SM01121 CEQ33_RS03695 CEQ33_RS03710 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CEQ33_RS03725 SM00220 Serine/Threonine protein kinases, catalytic domain CEQ33_RS03725 SM00740 CEQ33_RS03725 CEQ33_RS03730 SM00331 Sigma factor PP2C-like phosphatases CEQ33_RS03730 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CEQ33_RS03765 SM00487 DEAD-like helicases superfamily CEQ33_RS03765 SM00490 helicase superfamily c-terminal domain CEQ33_RS03775 SM01409 CEQ33_RS03775 CEQ33_RS03780 SM00072 Guanylate kinase homologues. CEQ33_RS03810 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ33_RS03815 SM00851 MGS-like domain CEQ33_RS03815 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEQ33_RS03815 SM01209 CEQ33_RS03815 CEQ33_RS03820 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CEQ33_RS03845 SM00363 S4 RNA-binding domain CEQ33_RS03870 SM00363 S4 RNA-binding domain CEQ33_RS03895 SM00864 Tubulin/FtsZ family, GTPase domain CEQ33_RS03895 SM00865 Tubulin/FtsZ family, C-terminal domain CEQ33_RS03900 SM00842 Cell division protein FtsA CEQ33_RS03920 SM00740 CEQ33_RS03920 CEQ33_RS03985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS04045 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ33_RS04055 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS04080 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ33_RS04110 SM00226 Low molecular weight phosphatase family CEQ33_RS04115 SM00829 Enoylreductase CEQ33_RS04120 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS04190 SM00465 GIY-YIG type nucleases (URI domain) CEQ33_RS04200 SM00463 Small MutS-related domain CEQ33_RS04200 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEQ33_RS04200 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ33_RS04205 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ33_RS04205 SM00481 DNA polymerase alpha chain like domain CEQ33_RS04205 SM00483 DNA polymerase X family CEQ33_RS04225 SM00873 B3/4 domain CEQ33_RS04225 SM00874 tRNA synthetase B5 domain CEQ33_RS04225 SM00896 Ferredoxin-fold anticodon binding domain CEQ33_RS04235 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEQ33_RS04320 SM00878 Biotin carboxylase C-terminal domain CEQ33_RS04345 SM00838 Elongation factor G C-terminus CEQ33_RS04395 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS04400 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS04420 SM00861 Transketolase, pyrimidine binding domain CEQ33_RS04450 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS04510 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS04520 SM01209 CEQ33_RS04520 CEQ33_RS04520 SM01210 CEQ33_RS04520 CEQ33_RS04525 SM00798 AICARFT/IMPCHase bienzyme CEQ33_RS04525 SM00851 MGS-like domain CEQ33_RS04550 SM01211 CEQ33_RS04550 CEQ33_RS04570 SM01001 AIR carboxylase CEQ33_RS04640 SM00047 Lysozyme subfamily 2 CEQ33_RS04640 SM00644 CEQ33_RS04640 CEQ33_RS04645 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS04660 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS04720 SM00914 CEQ33_RS04720 CEQ33_RS04750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ33_RS04815 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ33_RS04815 SM00924 MgtE intracellular N domain CEQ33_RS04830 SM00954 Region found in RelA / SpoT proteins CEQ33_RS04840 SM01118 CEQ33_RS04840 CEQ33_RS04890 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS04895 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS04920 SM00825 Beta-ketoacyl synthase CEQ33_RS04935 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS04935 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ33_RS05020 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEQ33_RS05035 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS05045 SM01298 CEQ33_RS05045 CEQ33_RS05185 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ33_RS05240 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS05270 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS05270 SM00930 CEQ33_RS05270 CEQ33_RS05280 SM00493 CEQ33_RS05280 CEQ33_RS05455 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS05455 SM00357 Cold shock protein domain CEQ33_RS05455 SM00955 CEQ33_RS05455 CEQ33_RS05480 SM01192 CEQ33_RS05480 CEQ33_RS05480 SM01193 CEQ33_RS05480 CEQ33_RS05500 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ33_RS05625 SM00885 D5 N terminal like CEQ33_RS05645 SM01040 BRO family, N-terminal domain CEQ33_RS05650 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS05655 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS05695 SM00028 Tetratricopeptide repeats CEQ33_RS05720 SM00487 DEAD-like helicases superfamily CEQ33_RS05720 SM00490 helicase superfamily c-terminal domain CEQ33_RS05735 SM00257 Lysin motif CEQ33_RS05745 SM00957 SecA DEAD-like domain CEQ33_RS05745 SM00958 SecA preprotein cross-linking domain CEQ33_RS05760 SM00487 DEAD-like helicases superfamily CEQ33_RS05760 SM00490 helicase superfamily c-terminal domain CEQ33_RS05780 SM00267 diguanylate cyclase CEQ33_RS05840 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS05890 SM00046 Diacylglycerol kinase catalytic domain (presumed) CEQ33_RS05910 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS05915 SM00341 Helicase and RNase D C-terminal CEQ33_RS05915 SM00487 DEAD-like helicases superfamily CEQ33_RS05915 SM00490 helicase superfamily c-terminal domain CEQ33_RS05915 SM00956 CEQ33_RS05915 CEQ33_RS05920 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS05935 SM00797 Allophanate hydrolase subunit 2 CEQ33_RS05940 SM00796 Allophanate hydrolase subunit 1 CEQ33_RS06000 SM01091 Transporter associated domain CEQ33_RS06020 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ33_RS06020 SM01134 CEQ33_RS06020 CEQ33_RS06080 SM00833 Cobalamin synthesis protein cobW C-terminal domain CEQ33_RS06085 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS06090 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS06095 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS06125 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS06200 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS06210 SM00257 Lysin motif CEQ33_RS06225 SM00387 Histidine kinase-like ATPases CEQ33_RS06230 SM00448 cheY-homologous receiver domain CEQ33_RS06230 SM00862 Transcriptional regulatory protein, C terminal CEQ33_RS06265 SM01120 CEQ33_RS06265 CEQ33_RS06285 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS06300 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS06330 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS06345 SM00529 Helix-turn-helix diphteria tox regulatory element CEQ33_RS06345 SM00899 CEQ33_RS06345 CEQ33_RS06350 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS06435 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS06475 SM00478 endonuclease III CEQ33_RS06480 SM00836 DALR anticodon binding domain CEQ33_RS06480 SM01016 Arginyl tRNA synthetase N terminal dom CEQ33_RS06495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ33_RS06565 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS06585 SM00986 Uracil DNA glycosylase superfamily CEQ33_RS06585 SM00987 UreE urease accessory protein, C-terminal domain CEQ33_RS06600 SM01022 CEQ33_RS06600 CEQ33_RS06610 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS06645 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ33_RS06770 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEQ33_RS06805 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ33_RS06805 SM01134 CEQ33_RS06805 CEQ33_RS06825 SM00354 helix_turn _helix lactose operon repressor CEQ33_RS06900 SM00882 Coenzyme A transferase CEQ33_RS06905 SM00882 Coenzyme A transferase CEQ33_RS06945 SM00838 Elongation factor G C-terminus CEQ33_RS06945 SM00889 Elongation factor G, domain IV CEQ33_RS06965 SM00663 RNA polymerase I subunit A N-terminus CEQ33_RS07000 SM00649 Ribosomal protein L11/L12 CEQ33_RS07005 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEQ33_RS07005 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEQ33_RS07030 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEQ33_RS07040 SM00840 CEQ33_RS07040 CEQ33_RS07055 SM00670 Large family of predicted nucleotide-binding domains CEQ33_RS07060 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS07065 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS07065 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ33_RS07100 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS07195 SM00905 Dihydroneopterin aldolase CEQ33_RS07215 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS07225 SM00977 TilS substrate C-terminal domain CEQ33_RS07230 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS07240 SM00363 S4 RNA-binding domain CEQ33_RS07255 SM00487 DEAD-like helicases superfamily CEQ33_RS07255 SM00490 helicase superfamily c-terminal domain CEQ33_RS07255 SM00982 CEQ33_RS07255 CEQ33_RS07255 SM01058 CarD-like/TRCF domain CEQ33_RS07270 SM01400 CEQ33_RS07270 CEQ33_RS07305 SM00650 Ribosomal RNA adenine dimethylases CEQ33_RS07310 SM00493 CEQ33_RS07310 CEQ33_RS07330 SM00465 GIY-YIG type nucleases (URI domain) CEQ33_RS07385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ33_RS07385 SM00493 CEQ33_RS07385 CEQ33_RS07395 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS07410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS07410 SM00866 CEQ33_RS07410 CEQ33_RS07415 SM00642 Alpha-amylase domain CEQ33_RS07470 SM00257 Lysin motif CEQ33_RS07555 SM00357 Cold shock protein domain CEQ33_RS07610 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ33_RS07610 SM01240 CEQ33_RS07610 CEQ33_RS07655 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS07680 SM00855 Phosphoglycerate mutase family CEQ33_RS07765 SM00344 helix_turn_helix ASNC type CEQ33_RS07770 SM00257 Lysin motif CEQ33_RS07770 SM00644 CEQ33_RS07770 CEQ33_RS07885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS07890 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS07935 SM00014 Acid phosphatase homologues CEQ33_RS08010 SM00470 ParB-like nuclease domain CEQ33_RS08085 SM00882 Coenzyme A transferase CEQ33_RS08120 SM00899 CEQ33_RS08120 CEQ33_RS08125 SM00953 CEQ33_RS08125 CEQ33_RS08130 SM00422 helix_turn_helix, mercury resistance CEQ33_RS08135 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS08145 SM00470 ParB-like nuclease domain CEQ33_RS08155 SM01228 CEQ33_RS08155 CEQ33_RS08175 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS08175 SM00760 Bacterial dnaA protein helix-turn-helix domain CEQ33_RS08180 SM00480 DNA polymerase III beta subunit CEQ33_RS08195 SM00387 Histidine kinase-like ATPases CEQ33_RS08195 SM00433 TopoisomeraseII CEQ33_RS08200 SM00434 DNA Topoisomerase IV CEQ33_RS08240 SM00267 diguanylate cyclase CEQ33_RS08255 SM00788 Adenylosuccinate synthetase CEQ33_RS08275 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS08285 SM00448 cheY-homologous receiver domain CEQ33_RS08285 SM00862 Transcriptional regulatory protein, C terminal CEQ33_RS08290 SM00091 PAS domain CEQ33_RS08290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ33_RS08290 SM00387 Histidine kinase-like ATPases CEQ33_RS08290 SM00388 His Kinase A (phosphoacceptor) domain CEQ33_RS08305 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS08355 SM00857 Resolvase, N terminal domain CEQ33_RS08360 SM00857 Resolvase, N terminal domain CEQ33_RS08410 SM00857 Resolvase, N terminal domain CEQ33_RS08450 SM00487 DEAD-like helicases superfamily CEQ33_RS08515 SM00984 UDP binding domain CEQ33_RS08540 SM00507 HNH nucleases CEQ33_RS08630 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS08685 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS08695 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS08705 SM01038 Beta galactosidase small chain CEQ33_RS08740 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS08805 SM00450 Rhodanese Homology Domain CEQ33_RS08835 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS08855 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS08865 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS08905 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS09020 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS09040 SM01001 AIR carboxylase CEQ33_RS09085 SM00530 Helix-turn-helix XRE-family like proteins CEQ33_RS09095 SM00155 Phospholipase D. Active site motifs. CEQ33_RS09100 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS09205 SM00854 Bacterial capsule synthesis protein PGA_cap CEQ33_RS09235 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS09255 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ33_RS09325 SM00849 Metallo-beta-lactamase superfamily CEQ33_RS09330 SM00829 Enoylreductase CEQ33_RS09355 SM00062 Bacterial periplasmic substrate-binding proteins CEQ33_RS09355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEQ33_RS09365 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS09455 SM00988 UreE urease accessory protein, N-terminal domain CEQ33_RS09495 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS09500 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS09510 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS09585 SM00478 endonuclease III CEQ33_RS09635 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS09670 SM01266 CEQ33_RS09670 CEQ33_RS09710 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS09855 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS09880 SM00854 Bacterial capsule synthesis protein PGA_cap CEQ33_RS09925 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS09930 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS09935 SM00354 helix_turn _helix lactose operon repressor CEQ33_RS09950 SM00829 Enoylreductase CEQ33_RS09995 SM01130 CEQ33_RS09995 CEQ33_RS10035 SM01061 CAT RNA binding domain CEQ33_RS10050 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10055 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10075 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS10160 SM00954 Region found in RelA / SpoT proteins CEQ33_RS10170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS10170 SM00895 CEQ33_RS10170 CEQ33_RS10320 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10365 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ33_RS10365 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10405 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10425 SM00448 cheY-homologous receiver domain CEQ33_RS10425 SM00850 LytTr DNA-binding domain CEQ33_RS10430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEQ33_RS10430 SM00387 Histidine kinase-like ATPases CEQ33_RS10490 SM00871 Bacterial transcription activator, effector binding domain CEQ33_RS10515 SM00855 Phosphoglycerate mutase family CEQ33_RS10530 SM01022 CEQ33_RS10530 CEQ33_RS10555 SM00867 YceI-like domain CEQ33_RS10620 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS10640 SM00342 helix_turn_helix, arabinose operon control protein CEQ33_RS10645 SM00644 CEQ33_RS10645 CEQ33_RS10695 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ33_RS10695 SM01134 CEQ33_RS10695 CEQ33_RS10700 SM00829 Enoylreductase CEQ33_RS10710 SM01120 CEQ33_RS10710 CEQ33_RS10745 SM00829 Enoylreductase CEQ33_RS10780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ33_RS10780 SM00387 Histidine kinase-like ATPases CEQ33_RS10780 SM00388 His Kinase A (phosphoacceptor) domain CEQ33_RS10785 SM00448 cheY-homologous receiver domain CEQ33_RS10785 SM00862 Transcriptional regulatory protein, C terminal CEQ33_RS10795 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10805 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS10900 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS10965 SM00903 Flavin reductase like domain CEQ33_RS11040 SM00098 Alkaline phosphatase homologues CEQ33_RS11070 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ33_RS11085 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CEQ33_RS11085 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEQ33_RS11100 SM00047 Lysozyme subfamily 2 CEQ33_RS11180 SM00062 Bacterial periplasmic substrate-binding proteins CEQ33_RS11185 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS11215 SM00354 helix_turn _helix lactose operon repressor CEQ33_RS11245 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS11265 SM00852 Probable molybdopterin binding domain CEQ33_RS11275 SM00852 Probable molybdopterin binding domain CEQ33_RS11300 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ33_RS11315 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS11365 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEQ33_RS11365 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEQ33_RS11365 SM00493 CEQ33_RS11365 CEQ33_RS11380 SM01403 CEQ33_RS11380 CEQ33_RS11400 SM01382 CEQ33_RS11400 CEQ33_RS11400 SM01383 CEQ33_RS11400 CEQ33_RS11415 SM00322 K homology RNA-binding domain CEQ33_RS11435 SM01374 CEQ33_RS11435 CEQ33_RS11440 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEQ33_RS11495 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS11515 SM00662 RNA polymerases D CEQ33_RS11525 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS11530 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS11565 SM00829 Enoylreductase CEQ33_RS11570 SM00829 Enoylreductase CEQ33_RS11770 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS11795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS11805 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS11805 SM00895 CEQ33_RS11805 CEQ33_RS11850 SM01133 CEQ33_RS11850 CEQ33_RS11855 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CEQ33_RS11930 SM00357 Cold shock protein domain CEQ33_RS11930 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS11930 SM00959 Rho termination factor, N-terminal domain CEQ33_RS11945 SM00937 CEQ33_RS11945 CEQ33_RS11960 SM00226 Low molecular weight phosphatase family CEQ33_RS12020 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS12085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ33_RS12090 SM00155 Phospholipase D. Active site motifs. CEQ33_RS12125 SM00487 DEAD-like helicases superfamily CEQ33_RS12125 SM00490 helicase superfamily c-terminal domain CEQ33_RS12150 SM01005 Alanine racemase, C-terminal domain CEQ33_RS12165 SM00331 Sigma factor PP2C-like phosphatases CEQ33_RS12165 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CEQ33_RS12185 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ33_RS12185 SM00732 Likely ribonuclease with RNase H fold. CEQ33_RS12190 SM00731 SprT homologues. CEQ33_RS12240 SM01329 CEQ33_RS12240 CEQ33_RS12245 SM00917 LeuA allosteric (dimerisation) domain CEQ33_RS12295 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ33_RS12300 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS12305 SM00881 CoA binding domain CEQ33_RS12320 SM00354 helix_turn _helix lactose operon repressor CEQ33_RS12325 SM00640 Glycosyl hydrolases family 32 CEQ33_RS12335 SM00448 cheY-homologous receiver domain CEQ33_RS12335 SM00850 LytTr DNA-binding domain CEQ33_RS12345 SM00794 Staphylococcal AgrD protein CEQ33_RS12350 SM00793 Accessory gene regulator B CEQ33_RS12375 SM00883 Chaperonin 10 Kd subunit CEQ33_RS12390 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ33_RS12415 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ33_RS12430 SM00382 ATPases associated with a variety of cellular activities CEQ33_RS12490 SM01131 CEQ33_RS12490 CEQ33_RS12500 SM00710 Parallel beta-helix repeats CEQ33_RS12540 SM00998 Adenylosuccinate lyase C-terminus CEQ33_RS12565 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ33_RS12565 SM00292 breast cancer carboxy-terminal domain CEQ33_RS12565 SM00532 Ligase N family CEQ33_RS12590 SM00845 GatB domain CEQ33_RS12595 SM00046 Diacylglycerol kinase catalytic domain (presumed) CEQ33_RS12615 SM00479 CEQ33_RS12615 CEQ33_RS12665 SM00387 Histidine kinase-like ATPases CEQ33_RS12670 SM00421 helix_turn_helix, Lux Regulon CEQ33_RS12670 SM00448 cheY-homologous receiver domain CEQ33_RS12685 SM00226 Low molecular weight phosphatase family CEQ33_RS12750 SM00478 endonuclease III CEQ33_RS12805 SM00357 Cold shock protein domain CEQ33_RS12865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ33_RS12915 SM00357 Cold shock protein domain