CO689_RS00185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS00230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS00250	SM00354	helix_turn _helix lactose operon repressor
CO689_RS00260	SM00857	Resolvase, N terminal domain
CO689_RS00290	SM00422	helix_turn_helix, mercury resistance
CO689_RS00365	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS00515	SM00642	Alpha-amylase domain
CO689_RS00520	SM00354	helix_turn _helix lactose operon repressor
CO689_RS00565	SM00857	Resolvase, N terminal domain
CO689_RS00585	SM00857	Resolvase, N terminal domain
CO689_RS00600	SM00487	DEAD-like helicases superfamily
CO689_RS00600	SM00491	CO689_RS00600
CO689_RS00610	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CO689_RS00625	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS00865	SM00981	CO689_RS00865
CO689_RS00890	SM00363	S4 RNA-binding domain
CO689_RS00890	SM01390	CO689_RS00890
CO689_RS00930	SM00563	Phosphate acyltransferases
CO689_RS00940	SM00363	S4 RNA-binding domain
CO689_RS00970	SM00354	helix_turn _helix lactose operon repressor
CO689_RS00975	SM00830	Chorismate mutase type II
CO689_RS00995	SM00843	CO689_RS00995
CO689_RS01025	SM00849	Metallo-beta-lactamase superfamily
CO689_RS01055	SM00363	S4 RNA-binding domain
CO689_RS01070	SM00450	Rhodanese Homology Domain
CO689_RS01085	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS01135	SM00047	Lysozyme subfamily 2
CO689_RS01210	SM01234	CO689_RS01210
CO689_RS01340	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS01390	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS01400	SM00421	helix_turn_helix, Lux Regulon
CO689_RS01400	SM00448	cheY-homologous receiver domain
CO689_RS01405	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO689_RS01445	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01450	SM00062	Bacterial periplasmic substrate-binding proteins
CO689_RS01450	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO689_RS01630	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01640	SM00478	endonuclease III
CO689_RS01640	SM00525	CO689_RS01640
CO689_RS01655	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01705	SM00226	Low molecular weight phosphatase family
CO689_RS01720	SM00947	Carbonic anhydrase
CO689_RS01725	SM00421	helix_turn_helix, Lux Regulon
CO689_RS01725	SM00448	cheY-homologous receiver domain
CO689_RS01730	SM00387	Histidine kinase-like ATPases
CO689_RS01765	SM00479	CO689_RS01765
CO689_RS01780	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CO689_RS01785	SM00845	GatB domain
CO689_RS01815	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO689_RS01815	SM00292	breast cancer carboxy-terminal domain
CO689_RS01815	SM00532	Ligase N family
CO689_RS01835	SM00998	Adenylosuccinate lyase C-terminus
CO689_RS01875	SM01131	CO689_RS01875
CO689_RS01920	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01950	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01960	SM00382	ATPases associated with a variety of cellular activities
CO689_RS01965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS02035	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CO689_RS02070	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS02075	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS02090	SM00883	Chaperonin 10 Kd subunit
CO689_RS02110	SM00793	Accessory gene regulator B
CO689_RS02115	SM00794	Staphylococcal AgrD protein
CO689_RS02125	SM00448	cheY-homologous receiver domain
CO689_RS02125	SM00850	LytTr DNA-binding domain
CO689_RS02130	SM00640	Glycosyl hydrolases family 32
CO689_RS02145	SM00881	CoA binding domain
CO689_RS02150	SM00382	ATPases associated with a variety of cellular activities
CO689_RS02200	SM00917	LeuA allosteric (dimerisation) domain
CO689_RS02205	SM01329	CO689_RS02205
CO689_RS02245	SM00731	SprT homologues.
CO689_RS02250	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS02250	SM00732	Likely ribonuclease with RNase H fold.
CO689_RS02270	SM00331	Sigma factor PP2C-like phosphatases
CO689_RS02270	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CO689_RS02285	SM01005	Alanine racemase, C-terminal domain
CO689_RS02310	SM00487	DEAD-like helicases superfamily
CO689_RS02310	SM00490	helicase superfamily c-terminal domain
CO689_RS02360	SM00155	Phospholipase D. Active site motifs.
CO689_RS02365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS02400	SM00257	Lysin motif
CO689_RS02445	SM00382	ATPases associated with a variety of cellular activities
CO689_RS02505	SM00226	Low molecular weight phosphatase family
CO689_RS02520	SM00937	CO689_RS02520
CO689_RS02535	SM00357	Cold shock protein domain
CO689_RS02535	SM00382	ATPases associated with a variety of cellular activities
CO689_RS02535	SM00959	Rho termination factor, N-terminal domain
CO689_RS02610	SM01133	CO689_RS02610
CO689_RS02665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS02665	SM00895	CO689_RS02665
CO689_RS02675	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS02900	SM00829	Enoylreductase
CO689_RS02905	SM00829	Enoylreductase
CO689_RS02910	SM00829	Enoylreductase
CO689_RS02920	SM00829	Enoylreductase
CO689_RS02935	SM00100	Cyclic nucleotide-monophosphate binding domain
CO689_RS02935	SM00419	helix_turn_helix, cAMP Regulatory protein
CO689_RS02970	SM00855	Phosphoglycerate mutase family
CO689_RS03005	SM00382	ATPases associated with a variety of cellular activities
CO689_RS03010	SM00382	ATPases associated with a variety of cellular activities
CO689_RS03020	SM00662	RNA polymerases D
CO689_RS03040	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS03095	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CO689_RS03100	SM01374	CO689_RS03100
CO689_RS03120	SM00322	K homology RNA-binding domain
CO689_RS03135	SM01382	CO689_RS03135
CO689_RS03135	SM01383	CO689_RS03135
CO689_RS03155	SM01403	CO689_RS03155
CO689_RS03175	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CO689_RS03175	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CO689_RS03175	SM00493	CO689_RS03175
CO689_RS03240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS03250	SM00421	helix_turn_helix, Lux Regulon
CO689_RS03250	SM00448	cheY-homologous receiver domain
CO689_RS03265	SM00382	ATPases associated with a variety of cellular activities
CO689_RS03275	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS03300	SM00852	Probable molybdopterin binding domain
CO689_RS03310	SM00852	Probable molybdopterin binding domain
CO689_RS03320	SM00382	ATPases associated with a variety of cellular activities
CO689_RS03350	SM00354	helix_turn _helix lactose operon repressor
CO689_RS03405	SM00988	UreE urease accessory protein, N-terminal domain
CO689_RS03505	SM00047	Lysozyme subfamily 2
CO689_RS03520	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO689_RS03520	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CO689_RS03540	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO689_RS03610	SM00903	Flavin reductase like domain
CO689_RS03680	SM00382	ATPases associated with a variety of cellular activities
CO689_RS03690	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS03785	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS03795	SM00382	ATPases associated with a variety of cellular activities
CO689_RS03805	SM00448	cheY-homologous receiver domain
CO689_RS03805	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS03810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO689_RS03810	SM00387	Histidine kinase-like ATPases
CO689_RS03810	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS03840	SM00829	Enoylreductase
CO689_RS03860	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS03900	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS03935	SM00421	helix_turn_helix, Lux Regulon
CO689_RS03935	SM00448	cheY-homologous receiver domain
CO689_RS03940	SM00387	Histidine kinase-like ATPases
CO689_RS03965	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO689_RS04010	SM00867	YceI-like domain 
CO689_RS04035	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04045	SM00062	Bacterial periplasmic substrate-binding proteins
CO689_RS04045	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO689_RS04055	SM00855	Phosphoglycerate mutase family
CO689_RS04100	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO689_RS04105	SM00448	cheY-homologous receiver domain
CO689_RS04105	SM00850	LytTr DNA-binding domain
CO689_RS04155	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO689_RS04155	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04185	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS04235	SM00895	CO689_RS04235
CO689_RS04240	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04240	SM01086	C-terminal, D2-small domain, of ClpB protein
CO689_RS04250	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CO689_RS04290	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04300	SM01038	Beta galactosidase small chain
CO689_RS04305	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS04330	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04335	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04380	SM00354	helix_turn _helix lactose operon repressor
CO689_RS04445	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04475	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS04475	SM00876	Biotin and Thiamin Synthesis associated domain
CO689_RS04525	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CO689_RS04530	SM00829	Enoylreductase
CO689_RS04555	SM00850	LytTr DNA-binding domain
CO689_RS04595	SM00899	CO689_RS04595
CO689_RS04645	SM00878	Biotin carboxylase C-terminal domain
CO689_RS04655	SM00797	Allophanate hydrolase subunit 2
CO689_RS04660	SM00796	Allophanate hydrolase subunit 1
CO689_RS04740	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS04830	SM00382	ATPases associated with a variety of cellular activities
CO689_RS04835	SM00422	helix_turn_helix, mercury resistance
CO689_RS04970	SM00382	ATPases associated with a variety of cellular activities
CO689_RS05055	SM01120	CO689_RS05055
CO689_RS05080	SM00382	ATPases associated with a variety of cellular activities
CO689_RS05180	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS05215	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS05250	SM00834	Putative regulatory protein
CO689_RS05275	SM00487	DEAD-like helicases superfamily
CO689_RS05275	SM00490	helicase superfamily c-terminal domain
CO689_RS05350	SM01208	CO689_RS05350
CO689_RS05380	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS05385	SM00450	Rhodanese Homology Domain
CO689_RS05395	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS05410	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS05415	SM01208	CO689_RS05415
CO689_RS05435	SM00382	ATPases associated with a variety of cellular activities
CO689_RS05435	SM00930	CO689_RS05435
CO689_RS05445	SM00478	endonuclease III
CO689_RS05445	SM01009	AlkA N-terminal domain
CO689_RS05455	SM01060	CO689_RS05455
CO689_RS05475	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CO689_RS05475	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CO689_RS05655	SM00861	Transketolase, pyrimidine binding domain
CO689_RS05675	SM00487	DEAD-like helicases superfamily
CO689_RS05675	SM00490	helicase superfamily c-terminal domain
CO689_RS05710	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS05730	SM00854	Bacterial capsule synthesis protein PGA_cap
CO689_RS05800	SM00829	Enoylreductase
CO689_RS05805	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS05875	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS05975	SM00450	Rhodanese Homology Domain
CO689_RS06040	SM00829	Enoylreductase
CO689_RS06055	SM00354	helix_turn _helix lactose operon repressor
CO689_RS06110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS06110	SM00866	CO689_RS06110
CO689_RS06180	SM00487	DEAD-like helicases superfamily
CO689_RS06225	SM00900	CO689_RS06225
CO689_RS06250	SM01060	CO689_RS06250
CO689_RS06260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS06290	SM00450	Rhodanese Homology Domain
CO689_RS06290	SM00849	Metallo-beta-lactamase superfamily
CO689_RS06295	SM00450	Rhodanese Homology Domain
CO689_RS06340	SM00829	Enoylreductase
CO689_RS06365	SM00829	Enoylreductase
CO689_RS06385	SM00422	helix_turn_helix, mercury resistance
CO689_RS06415	SM01130	CO689_RS06415
CO689_RS06455	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS06490	SM00354	helix_turn _helix lactose operon repressor
CO689_RS06550	SM00829	Enoylreductase
CO689_RS06565	SM00047	Lysozyme subfamily 2
CO689_RS06595	SM00855	Phosphoglycerate mutase family
CO689_RS06630	SM00387	Histidine kinase-like ATPases
CO689_RS06630	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS06635	SM00448	cheY-homologous receiver domain
CO689_RS06635	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS06675	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CO689_RS06720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS06730	SM00226	Low molecular weight phosphatase family
CO689_RS06735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS06750	SM00829	Enoylreductase
CO689_RS06765	SM00422	helix_turn_helix, mercury resistance
CO689_RS06790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS06810	SM00857	Resolvase, N terminal domain
CO689_RS06815	SM00857	Resolvase, N terminal domain
CO689_RS06910	SM00849	Metallo-beta-lactamase superfamily
CO689_RS06925	SM00091	PAS domain
CO689_RS06925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO689_RS06925	SM00387	Histidine kinase-like ATPases
CO689_RS06925	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS06930	SM00448	cheY-homologous receiver domain
CO689_RS06930	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS06950	SM00788	Adenylosuccinate synthetase
CO689_RS06965	SM00267	diguanylate cyclase
CO689_RS07000	SM00434	DNA Topoisomerase IV
CO689_RS07005	SM00387	Histidine kinase-like ATPases
CO689_RS07005	SM00433	TopoisomeraseII
CO689_RS07020	SM00480	DNA polymerase III beta subunit
CO689_RS07025	SM00382	ATPases associated with a variety of cellular activities
CO689_RS07025	SM00760	Bacterial dnaA protein helix-turn-helix domain
CO689_RS07045	SM01228	CO689_RS07045
CO689_RS07055	SM00470	ParB-like nuclease domain
CO689_RS07090	SM00470	ParB-like nuclease domain
CO689_RS07120	SM01276	CO689_RS07120
CO689_RS07140	SM00318	Staphylococcal nuclease homologues
CO689_RS07140	SM00894	Excalibur calcium-binding domain
CO689_RS07165	SM00855	Phosphoglycerate mutase family
CO689_RS07185	SM00014	Acid phosphatase homologues
CO689_RS07245	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO689_RS07245	SM01240	CO689_RS07245
CO689_RS07435	SM00257	Lysin motif
CO689_RS07495	SM00642	Alpha-amylase domain
CO689_RS07500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS07500	SM00866	CO689_RS07500
CO689_RS07530	SM00382	ATPases associated with a variety of cellular activities
CO689_RS07540	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO689_RS07540	SM00493	CO689_RS07540
CO689_RS07595	SM00465	GIY-YIG type nucleases (URI domain)
CO689_RS07680	SM00493	CO689_RS07680
CO689_RS07685	SM00650	Ribosomal RNA adenine dimethylases
CO689_RS07720	SM01400	CO689_RS07720
CO689_RS07735	SM00487	DEAD-like helicases superfamily
CO689_RS07735	SM00490	helicase superfamily c-terminal domain
CO689_RS07735	SM00982	CO689_RS07735
CO689_RS07735	SM01058	CarD-like/TRCF domain
CO689_RS07750	SM00363	S4 RNA-binding domain
CO689_RS07760	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS07765	SM00977	TilS substrate C-terminal domain
CO689_RS07775	SM00382	ATPases associated with a variety of cellular activities
CO689_RS07795	SM00905	Dihydroneopterin aldolase
CO689_RS07910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO689_RS07930	SM01022	CO689_RS07930
CO689_RS07955	SM00382	ATPases associated with a variety of cellular activities
CO689_RS07955	SM01086	C-terminal, D2-small domain, of ClpB protein
CO689_RS07960	SM00382	ATPases associated with a variety of cellular activities
CO689_RS07965	SM00670	Large family of predicted nucleotide-binding domains
CO689_RS07980	SM00840	CO689_RS07980
CO689_RS07990	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CO689_RS08015	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CO689_RS08015	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CO689_RS08020	SM00649	Ribosomal protein L11/L12
CO689_RS08050	SM00663	RNA polymerase I subunit A N-terminus
CO689_RS08070	SM00838	Elongation factor G C-terminus
CO689_RS08070	SM00889	Elongation factor G, domain IV
CO689_RS08180	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CO689_RS08215	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08220	SM00062	Bacterial periplasmic substrate-binding proteins
CO689_RS08240	SM00986	Uracil DNA glycosylase superfamily
CO689_RS08240	SM00987	UreE urease accessory protein, C-terminal domain 
CO689_RS08325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS08345	SM00836	DALR anticodon binding domain
CO689_RS08345	SM01016	Arginyl tRNA synthetase N terminal dom
CO689_RS08425	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08430	SM00529	Helix-turn-helix diphteria tox regulatory element
CO689_RS08435	SM00014	Acid phosphatase homologues
CO689_RS08450	SM01266	CO689_RS08450
CO689_RS08480	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08510	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08525	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08560	SM00448	cheY-homologous receiver domain
CO689_RS08560	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS08565	SM00387	Histidine kinase-like ATPases
CO689_RS08570	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08590	SM00257	Lysin motif
CO689_RS08600	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS08745	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08750	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS08760	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CO689_RS08820	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO689_RS08820	SM01134	CO689_RS08820
CO689_RS08835	SM01091	Transporter associated domain
CO689_RS08850	SM00448	cheY-homologous receiver domain
CO689_RS08850	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS08855	SM00387	Histidine kinase-like ATPases
CO689_RS08855	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS08920	SM00796	Allophanate hydrolase subunit 1
CO689_RS08925	SM00797	Allophanate hydrolase subunit 2
CO689_RS08935	SM00382	ATPases associated with a variety of cellular activities
CO689_RS08940	SM00341	Helicase and RNase D C-terminal
CO689_RS08940	SM00487	DEAD-like helicases superfamily
CO689_RS08940	SM00490	helicase superfamily c-terminal domain
CO689_RS08940	SM00956	CO689_RS08940
CO689_RS08945	SM00382	ATPases associated with a variety of cellular activities
CO689_RS09010	SM00382	ATPases associated with a variety of cellular activities
CO689_RS09070	SM00267	diguanylate cyclase
CO689_RS09090	SM00487	DEAD-like helicases superfamily
CO689_RS09090	SM00490	helicase superfamily c-terminal domain
CO689_RS09105	SM00957	SecA DEAD-like domain
CO689_RS09105	SM00958	SecA preprotein cross-linking domain
CO689_RS09115	SM00257	Lysin motif
CO689_RS09120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS09130	SM00487	DEAD-like helicases superfamily
CO689_RS09130	SM00490	helicase superfamily c-terminal domain
CO689_RS09155	SM00028	Tetratricopeptide repeats
CO689_RS09240	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CO689_RS09325	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CO689_RS09345	SM01192	CO689_RS09345
CO689_RS09345	SM01193	CO689_RS09345
CO689_RS09365	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS09365	SM00357	Cold shock protein domain
CO689_RS09365	SM00955	CO689_RS09365
CO689_RS09385	SM00903	Flavin reductase like domain
CO689_RS09395	SM00357	Cold shock protein domain
CO689_RS09460	SM00493	CO689_RS09460
CO689_RS09470	SM00382	ATPases associated with a variety of cellular activities
CO689_RS09470	SM00930	CO689_RS09470
CO689_RS09500	SM00382	ATPases associated with a variety of cellular activities
CO689_RS09720	SM00507	HNH nucleases
CO689_RS09830	SM00287	Bacterial SH3 domain homologues
CO689_RS09870	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS09925	SM00422	helix_turn_helix, mercury resistance
CO689_RS10015	SM01298	CO689_RS10015
CO689_RS10045	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS10065	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CO689_RS10155	SM00825	Beta-ketoacyl synthase
CO689_RS10175	SM00382	ATPases associated with a variety of cellular activities
CO689_RS10180	SM00382	ATPases associated with a variety of cellular activities
CO689_RS10250	SM01118	CO689_RS10250
CO689_RS10260	SM00954	Region found in RelA / SpoT proteins
CO689_RS10275	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO689_RS10275	SM00924	MgtE intracellular N domain
CO689_RS10345	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO689_RS10415	SM00382	ATPases associated with a variety of cellular activities
CO689_RS10425	SM00725	NEAr Transporter domain
CO689_RS10430	SM00725	NEAr Transporter domain
CO689_RS10435	SM00725	NEAr Transporter domain
CO689_RS10450	SM00382	ATPases associated with a variety of cellular activities
CO689_RS10465	SM00914	CO689_RS10465
CO689_RS10540	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS10555	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO689_RS10560	SM00047	Lysozyme subfamily 2
CO689_RS10560	SM00644	CO689_RS10560
CO689_RS10620	SM00226	Low molecular weight phosphatase family
CO689_RS10630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO689_RS10635	SM01133	CO689_RS10635
CO689_RS10665	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO689_RS10665	SM01134	CO689_RS10665
CO689_RS10715	SM01001	AIR carboxylase
CO689_RS10735	SM01211	CO689_RS10735
CO689_RS10760	SM00798	AICARFT/IMPCHase bienzyme
CO689_RS10760	SM00851	MGS-like domain
CO689_RS10765	SM01209	CO689_RS10765
CO689_RS10765	SM01210	CO689_RS10765
CO689_RS10780	SM00382	ATPases associated with a variety of cellular activities
CO689_RS10865	SM00861	Transketolase, pyrimidine binding domain
CO689_RS10885	SM00530	Helix-turn-helix XRE-family like proteins 
CO689_RS10890	SM00382	ATPases associated with a variety of cellular activities
CO689_RS10940	SM00838	Elongation factor G C-terminus
CO689_RS10965	SM00878	Biotin carboxylase C-terminal domain
CO689_RS11045	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CO689_RS11055	SM00873	B3/4 domain
CO689_RS11055	SM00874	tRNA synthetase B5 domain
CO689_RS11055	SM00896	Ferredoxin-fold anticodon binding domain
CO689_RS11075	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO689_RS11075	SM00481	DNA polymerase alpha chain like domain
CO689_RS11075	SM00483	DNA polymerase X family
CO689_RS11080	SM00463	Small MutS-related domain
CO689_RS11080	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CO689_RS11080	SM00534	ATPase domain of DNA mismatch repair MUTS family
CO689_RS11090	SM00465	GIY-YIG type nucleases (URI domain)
CO689_RS11145	SM00479	CO689_RS11145
CO689_RS11215	SM00740	CO689_RS11215
CO689_RS11235	SM00842	Cell division protein FtsA
CO689_RS11240	SM00864	Tubulin/FtsZ family, GTPase domain
CO689_RS11240	SM00865	Tubulin/FtsZ family, C-terminal domain
CO689_RS11265	SM00363	S4 RNA-binding domain
CO689_RS11300	SM00363	S4 RNA-binding domain
CO689_RS11345	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CO689_RS11350	SM00851	MGS-like domain
CO689_RS11350	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CO689_RS11350	SM01209	CO689_RS11350
CO689_RS11365	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CO689_RS11395	SM00072	Guanylate kinase homologues.
CO689_RS11400	SM01409	CO689_RS11400
CO689_RS11415	SM00487	DEAD-like helicases superfamily
CO689_RS11415	SM00490	helicase superfamily c-terminal domain
CO689_RS11460	SM00331	Sigma factor PP2C-like phosphatases
CO689_RS11460	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CO689_RS11465	SM00220	Serine/Threonine protein kinases, catalytic domain
CO689_RS11465	SM00740	CO689_RS11465
CO689_RS11480	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CO689_RS11495	SM01120	CO689_RS11495
CO689_RS11495	SM01121	CO689_RS11495
CO689_RS11510	SM00487	DEAD-like helicases superfamily
CO689_RS11510	SM00490	helicase superfamily c-terminal domain
CO689_RS11525	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CO689_RS11530	SM00822	CO689_RS11530
CO689_RS11540	SM00358	Double-stranded RNA binding motif
CO689_RS11540	SM00535	Ribonuclease III family
CO689_RS11545	SM00968	SMC proteins Flexible Hinge Domain
CO689_RS11550	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11550	SM00962	SRP54-type protein, GTPase domain
CO689_RS11550	SM00963	SRP54-type protein, helical bundle domain
CO689_RS11560	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11560	SM00962	SRP54-type protein, GTPase domain
CO689_RS11560	SM00963	SRP54-type protein, helical bundle domain
CO689_RS11615	SM00871	Bacterial transcription activator, effector binding domain
CO689_RS11635	SM00881	CoA binding domain
CO689_RS11645	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CO689_RS11645	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CO689_RS11645	SM00493	CO689_RS11645
CO689_RS11665	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11665	SM01086	C-terminal, D2-small domain, of ClpB protein
CO689_RS11705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO689_RS11715	SM00479	CO689_RS11715
CO689_RS11715	SM00481	DNA polymerase alpha chain like domain
CO689_RS11725	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS11725	SM00322	K homology RNA-binding domain
CO689_RS11775	SM00448	cheY-homologous receiver domain
CO689_RS11775	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS11780	SM00387	Histidine kinase-like ATPases
CO689_RS11780	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS11795	SM00904	Riboflavin kinase
CO689_RS11800	SM01387	CO689_RS11800
CO689_RS11805	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS11805	SM00322	K homology RNA-binding domain
CO689_RS11810	SM00849	Metallo-beta-lactamase superfamily
CO689_RS11815	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11815	SM00843	CO689_RS11815
CO689_RS11820	SM00866	CO689_RS11820
CO689_RS11855	SM00852	Probable molybdopterin binding domain
CO689_RS11860	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11865	SM00322	K homology RNA-binding domain
CO689_RS11865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS11920	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11925	SM00382	ATPases associated with a variety of cellular activities
CO689_RS11940	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS11960	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CO689_RS11960	SM00534	ATPase domain of DNA mismatch repair MUTS family
CO689_RS11965	SM00853	MutL C terminal dimerisation domain
CO689_RS11965	SM01340	CO689_RS11965
CO689_RS12040	SM01230	CO689_RS12040
CO689_RS12045	SM00422	helix_turn_helix, mercury resistance
CO689_RS12050	SM00155	Phospholipase D. Active site motifs.
CO689_RS12060	SM00318	Staphylococcal nuclease homologues
CO689_RS12075	SM01134	CO689_RS12075
CO689_RS12130	SM01240	CO689_RS12130
CO689_RS12140	SM00354	helix_turn _helix lactose operon repressor
CO689_RS12145	SM00640	Glycosyl hydrolases family 32
CO689_RS12185	SM00861	Transketolase, pyrimidine binding domain
CO689_RS12235	SM01207	CO689_RS12235
CO689_RS12240	SM00387	Histidine kinase-like ATPases
CO689_RS12240	SM00433	TopoisomeraseII
CO689_RS12245	SM00434	DNA Topoisomerase IV
CO689_RS12255	SM01061	CAT RNA binding domain
CO689_RS12375	SM00382	ATPases associated with a variety of cellular activities
CO689_RS12380	SM00382	ATPases associated with a variety of cellular activities
CO689_RS12415	SM00382	ATPases associated with a variety of cellular activities
CO689_RS12440	SM00382	ATPases associated with a variety of cellular activities
CO689_RS12450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CO689_RS12455	SM01130	CO689_RS12455
CO689_RS12475	SM01005	Alanine racemase, C-terminal domain
CO689_RS12490	SM00357	Cold shock protein domain
CO689_RS12515	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CO689_RS12525	SM00327	von Willebrand factor (vWF) type A domain
CO689_RS12530	SM00382	ATPases associated with a variety of cellular activities
CO689_RS12555	SM00861	Transketolase, pyrimidine binding domain
CO689_RS12560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO689_RS12560	SM00387	Histidine kinase-like ATPases
CO689_RS12560	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS12565	SM00448	cheY-homologous receiver domain
CO689_RS12565	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS12570	SM00014	Acid phosphatase homologues
CO689_RS12585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO689_RS12585	SM00245	tail specific protease
CO689_RS12630	SM00567	E-Z type HEAT repeats
CO689_RS12630	SM00932	Scaffold protein Nfu/NifU N terminal
CO689_RS12650	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CO689_RS12650	SM00475	5'-3' exonuclease
CO689_RS12665	SM00981	CO689_RS12665
CO689_RS12705	SM00478	endonuclease III
CO689_RS12720	SM00479	CO689_RS12720
CO689_RS12720	SM00491	CO689_RS12720
CO689_RS12760	SM00028	Tetratricopeptide repeats
CO689_RS12780	SM00562	CO689_RS12780
CO689_RS12800	SM00411	bacterial (prokaryotic) histone like domain
CO689_RS12815	SM00316	Ribosomal protein S1-like RNA-binding domain
CO689_RS12825	SM00870	CO689_RS12825
CO689_RS12835	SM00257	Lysin motif
CO689_RS12840	SM00487	DEAD-like helicases superfamily
CO689_RS12840	SM00490	helicase superfamily c-terminal domain
CO689_RS12860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO689_RS12860	SM00387	Histidine kinase-like ATPases
CO689_RS12860	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS12865	SM00448	cheY-homologous receiver domain
CO689_RS12865	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS12870	SM00363	S4 RNA-binding domain
CO689_RS12910	SM00822	CO689_RS12910
CO689_RS12930	SM00342	helix_turn_helix, arabinose operon control protein
CO689_RS12930	SM00871	Bacterial transcription activator, effector binding domain
CO689_RS12935	SM01350	CO689_RS12935
CO689_RS12960	SM00861	Transketolase, pyrimidine binding domain
CO689_RS13025	SM00878	Biotin carboxylase C-terminal domain
CO689_RS13035	SM00841	Elongation factor P, C-terminal
CO689_RS13035	SM01185	CO689_RS13035
CO689_RS13060	SM00450	Rhodanese Homology Domain
CO689_RS13115	SM00849	Metallo-beta-lactamase superfamily
CO689_RS13180	SM00382	ATPases associated with a variety of cellular activities
CO689_RS13185	SM00518	AP endonuclease family 2
CO689_RS13190	SM00487	DEAD-like helicases superfamily
CO689_RS13190	SM00490	helicase superfamily c-terminal domain
CO689_RS13210	SM00400	zinc finger
CO689_RS13210	SM00493	CO689_RS13210
CO689_RS13220	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO689_RS13280	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS13295	SM00271	DnaJ molecular chaperone homology domain
CO689_RS13315	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO689_RS13320	SM00838	Elongation factor G C-terminus
CO689_RS13335	SM00849	Metallo-beta-lactamase superfamily
CO689_RS13345	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO689_RS13360	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS13370	SM01103	CO689_RS13370
CO689_RS13425	SM00732	Likely ribonuclease with RNase H fold.
CO689_RS13435	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CO689_RS13440	SM00382	ATPases associated with a variety of cellular activities
CO689_RS13445	SM00028	Tetratricopeptide repeats
CO689_RS13475	SM00382	ATPases associated with a variety of cellular activities
CO689_RS13500	SM00287	Bacterial SH3 domain homologues
CO689_RS13500	SM00646	CO689_RS13500
CO689_RS13510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO689_RS13510	SM00954	Region found in RelA / SpoT proteins
CO689_RS13530	SM01323	CO689_RS13530
CO689_RS13545	SM00382	ATPases associated with a variety of cellular activities
CO689_RS13550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO689_RS13625	SM00650	Ribosomal RNA adenine dimethylases
CO689_RS13700	SM01004	Delta-aminolevulinic acid dehydratase
CO689_RS13730	SM00382	ATPases associated with a variety of cellular activities
CO689_RS13730	SM00994	ClpX C4-type zinc finger
CO689_RS13730	SM01086	C-terminal, D2-small domain, of ClpB protein
CO689_RS13770	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CO689_RS13790	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CO689_RS13800	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CO689_RS13800	SM01232	CO689_RS13800
CO689_RS13805	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CO689_RS13805	SM00474	3'-5' exonuclease
CO689_RS13805	SM00475	5'-3' exonuclease
CO689_RS13805	SM00482	DNA polymerase A domain
CO689_RS13810	SM00387	Histidine kinase-like ATPases
CO689_RS13810	SM00388	His Kinase A (phosphoacceptor) domain
CO689_RS13815	SM00448	cheY-homologous receiver domain
CO689_RS13815	SM00862	Transcriptional regulatory protein, C terminal
CO689_RS13820	SM01329	CO689_RS13820
CO689_RS13855	SM00919	Malic enzyme, NAD binding domain
CO689_RS13855	SM01274	CO689_RS13855
CO689_RS13860	SM00481	DNA polymerase alpha chain like domain
CO689_RS13870	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO689_RS13880	SM00849	Metallo-beta-lactamase superfamily
