locus-tag	class	description
MUA31_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
MUA31_RS00010	COG0592	DNA-directed DNA polymerase activity
MUA31_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MUA31_RS00025	COG0187	DNA topoisomerase II activity
MUA31_RS00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MUA31_RS00040	COG2986	histidine ammonia-lyase
MUA31_RS00045	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
MUA31_RS00065	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
MUA31_RS00070	COG0359	binds to the 23S rRNA
MUA31_RS00075	COG0305	Participates in initiation and elongation during chromosome replication
MUA31_RS00085	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUA31_RS00100	COG0745	RESPONSE REGULATOR receiver
MUA31_RS00105	COG5002	protein histidine kinase activity
MUA31_RS00110	COG4863	YycH protein
MUA31_RS00120	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
MUA31_RS00125	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
MUA31_RS00195	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MUA31_RS00205	COG3448	diguanylate cyclase activity
MUA31_RS00205	COG4175	Glycine betaine
MUA31_RS00210	COG1028	Short-chain dehydrogenase reductase Sdr
MUA31_RS00225	COG1280	lysine exporter protein (LysE YggA)
MUA31_RS00275	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUA31_RS00275	COG3942	CHAP domain
MUA31_RS00290	COG1064	alcohol dehydrogenase
MUA31_RS00300	COG3477	response to acidic pH
MUA31_RS00305	COG3711	transcriptional antiterminator
MUA31_RS00305	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA31_RS00310	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA31_RS00310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA31_RS00310	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA31_RS00315	COG1482	cell wall glycoprotein biosynthetic process
MUA31_RS00320	COG0402	S-adenosylhomocysteine deaminase activity
MUA31_RS00325	COG1686	Belongs to the peptidase S11 family
MUA31_RS00355	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA31_RS00360	COG1609	Transcriptional regulator
MUA31_RS00370	COG1869	D-ribose catabolic process
MUA31_RS00390	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
MUA31_RS00405	COG0363	glucosamine-6-phosphate deaminase activity
MUA31_RS00410	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
MUA31_RS00425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUA31_RS00430	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA31_RS00435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA31_RS00460	COG0778	Nitroreductase
MUA31_RS00475	COG1063	alcohol dehydrogenase
MUA31_RS00495	COG2851	Citrate transporter
MUA31_RS00510	COG2720	vancomycin resistance protein
MUA31_RS00520	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUA31_RS00525	COG3246	L-lysine catabolic process to acetate
MUA31_RS00535	COG0730	response to heat
MUA31_RS00540	COG1937	Protein conserved in bacteria
MUA31_RS00545	COG2210	Belongs to the sulfur carrier protein TusA family
MUA31_RS00550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUA31_RS00555	COG1309	transcriptional regulator
MUA31_RS00575	COG1012	belongs to the aldehyde dehydrogenase family
MUA31_RS00590	COG0753	catalase activity
MUA31_RS00595	COG0662	Cupin 2, conserved barrel domain protein
MUA31_RS00650	COG2610	gluconate transmembrane transporter activity
MUA31_RS00660	COG2084	Dehydrogenase
MUA31_RS00670	COG1263	PTS System
MUA31_RS00670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS00670	COG2190	(PTS) system
MUA31_RS00700	COG3586	endonuclease activity
MUA31_RS00705	COG2188	Transcriptional regulator
MUA31_RS00710	COG2222	sugar isomerase
MUA31_RS00720	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS00720	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA31_RS00725	COG3715	PTS system
MUA31_RS00730	COG3716	PTS system mannose fructose sorbose family IID component
MUA31_RS00740	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUA31_RS00760	COG1609	Transcriptional regulator
MUA31_RS00770	COG1070	Carbohydrate kinase
MUA31_RS00775	COG1063	alcohol dehydrogenase
MUA31_RS00790	COG3181	Tripartite tricarboxylate transporter family receptor
MUA31_RS00805	COG1966	Carbon starvation protein
MUA31_RS00810	COG1054	Belongs to the UPF0176 family
MUA31_RS00820	COG2388	GCN5-related N-acetyl-transferase
MUA31_RS00835	COG2388	GCN5-related N-acetyl-transferase
MUA31_RS00840	COG0346	lactoylglutathione lyase activity
MUA31_RS00845	COG0789	Transcriptional regulator
MUA31_RS00850	COG1664	Polymer-forming cytoskeletal
MUA31_RS00860	COG0006	proline dipeptidase activity
MUA31_RS00870	COG0477	Major facilitator Superfamily
MUA31_RS00880	COG0667	Aldo Keto reductase
MUA31_RS00925	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA31_RS00930	COG1028	Short-chain dehydrogenase reductase Sdr
MUA31_RS00940	COG1288	antiporter activity
MUA31_RS00955	COG3871	stress protein (general stress protein 26)
MUA31_RS00960	COG1929	Belongs to the glycerate kinase type-1 family
MUA31_RS00970	COG1511	domain protein
MUA31_RS00990	COG0579	oxidoreductase
MUA31_RS01000	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA31_RS01005	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUA31_RS01015	COG1757	Na H antiporter
MUA31_RS01030	COG4195	phage-related replication protein
MUA31_RS01060	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUA31_RS01070	COG1609	Transcriptional regulator
MUA31_RS01070	COG2207	Transcriptional regulator
MUA31_RS01105	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
MUA31_RS01110	COG0556	nucleotide-excision repair
MUA31_RS01130	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA31_RS01135	COG0022	dehydrogenase e1 component
MUA31_RS01140	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA31_RS01145	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA31_RS01165	COG1288	antiporter activity
MUA31_RS01170	COG0549	Belongs to the carbamate kinase family
MUA31_RS01175	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA31_RS01225	COG0706	membrane insertase activity
MUA31_RS01240	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA31_RS01250	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MUA31_RS01280	COG4221	oxidoreductase activity
MUA31_RS01285	COG0069	glutamate synthase activity
MUA31_RS01290	COG2814	Major facilitator Superfamily
MUA31_RS01295	COG4336	lyase activity
MUA31_RS01320	COG0531	amino acid
MUA31_RS01330	COG0753	catalase activity
MUA31_RS01335	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
MUA31_RS01355	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUA31_RS01360	COG2011	ABC-type metal ion transport system permease component
MUA31_RS01365	COG1464	Belongs to the NlpA lipoprotein family
MUA31_RS01415	COG2210	Belongs to the sulfur carrier protein TusA family
MUA31_RS01425	COG3961	Belongs to the TPP enzyme family
MUA31_RS01430	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA31_RS01435	COG1510	regulation of RNA biosynthetic process
MUA31_RS01440	COG1012	belongs to the aldehyde dehydrogenase family
MUA31_RS01445	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
MUA31_RS01450	COG3583	domain protein
MUA31_RS01450	COG3583	domain protein
MUA31_RS01460	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUA31_RS01470	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MUA31_RS01505	COG0438	transferase activity, transferring glycosyl groups
MUA31_RS01510	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA31_RS01510	COG0463	Glycosyl transferase, family 2
MUA31_RS01520	COG0494	nUDIX hydrolase
MUA31_RS01530	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUA31_RS01540	COG3588	fructose-bisphosphate aldolase
MUA31_RS01545	COG2258	MOSC domain
MUA31_RS01580	COG1012	belongs to the aldehyde dehydrogenase family
MUA31_RS01580	COG1454	alcohol dehydrogenase
MUA31_RS01590	COG0640	Transcriptional regulator
MUA31_RS01600	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
MUA31_RS01605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS01605	COG1263	PTS System
MUA31_RS01610	COG1737	Transcriptional regulator
MUA31_RS01625	COG0640	Transcriptional regulator
MUA31_RS01640	COG1131	(ABC) transporter
MUA31_RS01670	COG0582	viral genome integration into host DNA
MUA31_RS01675	COG2111	Na H antiporter
MUA31_RS01675	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA31_RS01680	COG2111	Na H antiporter
MUA31_RS01685	COG1006	Multisubunit Na H antiporter MnhC subunit
MUA31_RS01695	COG1863	multisubunit Na H antiporter MnhE subunit
MUA31_RS01700	COG2212	antiporter activity
MUA31_RS01705	COG1320	monovalent cation:proton antiporter activity
MUA31_RS01715	COG1113	amino acid transport
MUA31_RS01725	COG1131	(ABC) transporter
MUA31_RS01735	COG2824	Alkylphosphonate utilization operon protein PhnA
MUA31_RS01745	COG2376	Dihydroxyacetone kinase
MUA31_RS01750	COG1461	Dihydroxyacetone kinase
MUA31_RS01755	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
MUA31_RS01760	COG1216	Glycosyl transferase, family 2
MUA31_RS01760	COG1442	glycosyl transferase family 8
MUA31_RS01780	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MUA31_RS01785	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA31_RS01795	COG0531	amino acid
MUA31_RS01810	COG0463	Glycosyl transferase, family 2
MUA31_RS01830	COG0446	pyridine nucleotide-disulphide oxidoreductase
MUA31_RS01835	COG1131	(ABC) transporter
MUA31_RS01855	COG1028	Short-chain dehydrogenase reductase Sdr
MUA31_RS01875	COG0318	PFAM AMP-dependent synthetase and ligase
MUA31_RS01880	COG0183	Belongs to the thiolase family
MUA31_RS01890	COG2235	arginine
MUA31_RS01900	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUA31_RS01905	COG1438	arginine binding
MUA31_RS01910	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUA31_RS01915	COG2022	thiamine diphosphate biosynthetic process
MUA31_RS01925	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUA31_RS01930	COG0352	thiamine-phosphate diphosphorylase activity
MUA31_RS01945	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUA31_RS01960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUA31_RS01970	COG1131	(ABC) transporter
MUA31_RS01985	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA31_RS01990	COG2508	Transcriptional regulator
MUA31_RS01995	COG1953	Uracil, thiamine, allantoin
MUA31_RS02000	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUA31_RS02010	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA31_RS02015	COG3257	ureidoglycine aminohydrolase activity
MUA31_RS02020	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
MUA31_RS02025	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
MUA31_RS02030	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUA31_RS02035	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUA31_RS02050	COG2807	transmembrane transport
MUA31_RS02055	COG5646	InterPro IPR014922
MUA31_RS02070	COG1518	maintenance of DNA repeat elements
MUA31_RS02100	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUA31_RS02105	COG1984	allophanate hydrolase subunit 2
MUA31_RS02110	COG0511	ligase activity, forming carbon-carbon bonds
MUA31_RS02115	COG0439	Biotin carboxylase
MUA31_RS02120	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
MUA31_RS02125	COG1914	H( )-stimulated, divalent metal cation uptake system
MUA31_RS02130	COG1070	Carbohydrate kinase
MUA31_RS02145	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
MUA31_RS02155	COG1695	Transcriptional regulator
MUA31_RS02200	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUA31_RS02215	COG3189	MarR family transcriptional regulator
MUA31_RS02220	COG1882	Formate acetyltransferase
MUA31_RS02235	COG0604	alcohol dehydrogenase
MUA31_RS02235	COG3321	synthase
MUA31_RS02245	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
MUA31_RS02255	COG3001	Fructosamine kinase
MUA31_RS02275	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
MUA31_RS02290	COG3764	Sortase (surface protein transpeptidase)
MUA31_RS02295	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
MUA31_RS02315	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MUA31_RS02335	COG1136	(ABC) transporter
MUA31_RS02340	COG0577	efflux transmembrane transporter activity
MUA31_RS02345	COG0583	DNA-binding transcription factor activity
MUA31_RS02350	COG1388	LysM domain
MUA31_RS02355	COG1380	Effector of murein hydrolase LrgA
MUA31_RS02365	COG0028	Belongs to the TPP enzyme family
MUA31_RS02380	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MUA31_RS02385	COG1687	branched-chain amino acid
MUA31_RS02390	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
MUA31_RS02415	COG1760	l-serine dehydratase
MUA31_RS02420	COG1760	l-serine dehydratase
MUA31_RS02430	COG2249	NAD(P)H dehydrogenase (quinone) activity
MUA31_RS02435	COG0778	Nitroreductase
MUA31_RS02440	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA31_RS02445	COG1132	(ABC) transporter
MUA31_RS02450	COG1132	(ABC) transporter
MUA31_RS02465	COG0346	lactoylglutathione lyase activity
MUA31_RS02470	COG2211	Major facilitator Superfamily
MUA31_RS02475	COG2207	Transcriptional regulator
MUA31_RS02480	COG3250	beta-galactosidase activity
MUA31_RS02485	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
MUA31_RS02490	COG1129	ABC transporter
MUA31_RS02500	COG0586	Pfam SNARE associated Golgi protein
MUA31_RS02505	COG2271	Major facilitator Superfamily
MUA31_RS02515	COG3527	Alpha-acetolactate decarboxylase
MUA31_RS02520	COG1289	transmembrane transporter activity
MUA31_RS02525	COG4876	unkown
MUA31_RS02530	COG0523	cobalamin synthesis protein
MUA31_RS02535	COG2357	RelA SpoT domain protein
MUA31_RS02545	COG1802	Transcriptional regulator
MUA31_RS02555	COG2610	gluconate transmembrane transporter activity
MUA31_RS02565	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA31_RS02570	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
MUA31_RS02590	COG1266	CAAX protease self-immunity
MUA31_RS02595	COG4619	ABC transporter
MUA31_RS02600	COG0390	transport system, permease component
MUA31_RS02605	COG2814	Major facilitator Superfamily
MUA31_RS02610	COG2272	Belongs to the type-B carboxylesterase lipase family
MUA31_RS02615	COG0531	amino acid
MUA31_RS02620	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
MUA31_RS02630	COG1174	glycine betaine transport
MUA31_RS02640	COG1174	glycine betaine transport
MUA31_RS02650	COG1309	transcriptional regulator
MUA31_RS02665	COG1346	cytolysis
MUA31_RS02670	COG1380	Effector of murein hydrolase LrgA
MUA31_RS02675	COG3279	Response regulator of the LytR AlgR family
MUA31_RS02680	COG3275	phosphorelay sensor kinase activity
MUA31_RS02690	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MUA31_RS02700	COG1113	amino acid transport
MUA31_RS02710	COG2814	Major facilitator Superfamily
MUA31_RS02720	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MUA31_RS02725	COG0588	phosphoglycerate mutase activity
MUA31_RS02735	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUA31_RS02740	COG0765	amino acid transport
MUA31_RS02745	COG1126	abc transporter atp-binding protein
MUA31_RS02785	COG2116	formate transmembrane transporter activity
MUA31_RS02800	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUA31_RS02810	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MUA31_RS02810	COG1648	precorrin-2 dehydrogenase activity
MUA31_RS02815	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
MUA31_RS02820	COG1140	nitrate reductase beta subunit
MUA31_RS02830	COG2181	nitrate reductase activity
MUA31_RS02840	COG4585	Histidine kinase
MUA31_RS02845	COG2197	response regulator
MUA31_RS02850	COG2223	nitrite transmembrane transporter activity
MUA31_RS02855	COG0772	Belongs to the SEDS family
MUA31_RS02860	COG3425	synthase
MUA31_RS02880	COG1846	Transcriptional regulator
MUA31_RS02885	COG0778	Nitroreductase
MUA31_RS02895	COG0697	spore germination
MUA31_RS02900	COG1301	dicarboxylic acid transport
MUA31_RS02910	COG1611	Belongs to the LOG family
MUA31_RS02930	COG0492	ferredoxin-NADP+ reductase activity
MUA31_RS02935	COG2814	Major facilitator Superfamily
MUA31_RS02940	COG0604	alcohol dehydrogenase
MUA31_RS02950	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA31_RS02955	COG1620	l-lactate permease
MUA31_RS02960	COG0438	transferase activity, transferring glycosyl groups
MUA31_RS02970	COG5002	protein histidine kinase activity
MUA31_RS02970	COG3850	Histidine kinase
MUA31_RS02975	COG0745	RESPONSE REGULATOR receiver
MUA31_RS02980	COG0577	efflux transmembrane transporter activity
MUA31_RS03005	COG2814	Major facilitator Superfamily
MUA31_RS03015	COG1566	PFAM secretion protein HlyD family protein
MUA31_RS03020	COG2814	Major facilitator Superfamily
MUA31_RS03025	COG1033	growth of symbiont in host cell
MUA31_RS03025	COG2409	Drug exporters of the RND superfamily
MUA31_RS03045	COG0598	Magnesium transport protein CorA
MUA31_RS03050	COG1304	FMN binding
MUA31_RS03065	COG0602	queuosine metabolic process
MUA31_RS03070	COG2094	Belongs to the DNA glycosylase MPG family
MUA31_RS03075	COG3152	Membrane
MUA31_RS03095	COG4152	abc transporter atp-binding protein
MUA31_RS03100	COG1668	transmembrane transport
MUA31_RS03105	COG1742	UPF0060 membrane protein
MUA31_RS03110	COG2017	converts alpha-aldose to the beta-anomer
MUA31_RS03120	COG1266	CAAX protease self-immunity
MUA31_RS03125	COG0010	Belongs to the arginase family
MUA31_RS03130	COG0583	DNA-binding transcription factor activity
MUA31_RS03135	COG3314	Sporulation integral membrane protein YlbJ
MUA31_RS03140	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
MUA31_RS03145	COG1228	amidohydrolase
MUA31_RS03150	COG0659	secondary active sulfate transmembrane transporter activity
MUA31_RS03155	COG1473	amidohydrolase
MUA31_RS03160	COG1028	Short-chain dehydrogenase reductase Sdr
MUA31_RS03165	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUA31_RS03180	COG2271	Major facilitator Superfamily
MUA31_RS03190	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUA31_RS03215	COG1113	amino acid transport
MUA31_RS03220	COG1737	Transcriptional regulator
MUA31_RS03245	COG1316	TRANSCRIPTIONal
MUA31_RS03255	COG3383	formate dehydrogenase (NAD+) activity
MUA31_RS03280	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA31_RS03285	COG2076	Multidrug Resistance protein
MUA31_RS03290	COG2076	Multidrug Resistance protein
MUA31_RS03305	COG1757	Na H antiporter
MUA31_RS03320	COG3942	CHAP domain
MUA31_RS03360	COG0829	nickel cation binding
MUA31_RS03370	COG0830	nickel cation binding
MUA31_RS03375	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
MUA31_RS03380	COG0804	urea catabolic process
MUA31_RS03385	COG0832	Belongs to the urease beta subunit family
MUA31_RS03390	COG0831	urea catabolic process
MUA31_RS03400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUA31_RS03405	COG1960	acyl-CoA dehydrogenase activity
MUA31_RS03410	COG1957	nucleoside hydrolase
MUA31_RS03415	COG1268	BioY protein
MUA31_RS03425	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MUA31_RS03430	COG1609	Transcriptional regulator
MUA31_RS03435	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MUA31_RS03440	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MUA31_RS03445	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
MUA31_RS03450	COG0725	ABC transporter, periplasmic molybdate-binding protein
MUA31_RS03455	COG4149	molybdate abc transporter
MUA31_RS03460	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
MUA31_RS03465	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUA31_RS03470	COG0521	Mo-molybdopterin cofactor biosynthetic process
MUA31_RS03475	COG0315	cyclic pyranopterin monophosphate synthase activity
MUA31_RS03480	COG0303	'Molybdopterin
MUA31_RS03490	COG0314	molybdopterin synthase activity
MUA31_RS03500	COG0746	molybdenum cofactor guanylyltransferase activity
MUA31_RS03505	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
MUA31_RS03515	COG1131	(ABC) transporter
MUA31_RS03520	COG0842	Transport permease protein
MUA31_RS03530	COG2197	response regulator
MUA31_RS03535	COG2814	Major facilitator Superfamily
MUA31_RS03555	COG2348	transferase activity, transferring amino-acyl groups
MUA31_RS03560	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MUA31_RS03590	COG4975	Glucose uptake
MUA31_RS03605	COG2252	PERMEase
MUA31_RS03620	COG0051	transcription antitermination factor activity, RNA binding
MUA31_RS03625	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MUA31_RS03630	COG0088	Forms part of the polypeptide exit tunnel
MUA31_RS03635	COG0089	rRNA binding
MUA31_RS03640	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
MUA31_RS03645	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
MUA31_RS03650	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MUA31_RS03655	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
MUA31_RS03660	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MUA31_RS03670	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MUA31_RS03675	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
MUA31_RS03680	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
MUA31_RS03685	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
MUA31_RS03690	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUA31_RS03695	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MUA31_RS03700	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
MUA31_RS03705	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
MUA31_RS03710	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
MUA31_RS03715	COG1841	ribosomal large subunit assembly
MUA31_RS03720	COG0200	Binds to the 23S rRNA
MUA31_RS03725	COG0201	protein transport
MUA31_RS03730	COG0563	adenylate kinase activity
MUA31_RS03740	COG0257	Belongs to the bacterial ribosomal protein bL36 family
MUA31_RS03745	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
MUA31_RS03750	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
MUA31_RS03755	COG0202	RNA polymerase activity
MUA31_RS03760	COG0203	ribosomal protein L17
MUA31_RS03780	COG0101	tRNA pseudouridine synthase activity
MUA31_RS03785	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MUA31_RS03790	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MUA31_RS03795	COG1442	glycosyl transferase family 8
MUA31_RS03820	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA31_RS03820	COG2213	PTS system mannitol-specific
MUA31_RS03825	COG2318	DinB family
MUA31_RS03830	COG2608	mercury ion transmembrane transporter activity
MUA31_RS03840	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUA31_RS03845	COG0574	Belongs to the PEP-utilizing enzyme family
MUA31_RS03845	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUA31_RS03850	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
MUA31_RS03855	COG2130	NADP-dependent
MUA31_RS03865	COG2130	NADP-dependent
MUA31_RS03870	COG0604	alcohol dehydrogenase
MUA31_RS03875	COG0604	alcohol dehydrogenase
MUA31_RS03880	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA31_RS03895	COG1302	Protein conserved in bacteria
MUA31_RS03905	COG2814	Major facilitator Superfamily
MUA31_RS03910	COG4264	IucA IucC family
MUA31_RS03915	COG3457	Alanine racemase
MUA31_RS03920	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MUA31_RS03925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA31_RS03930	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA31_RS03935	COG3314	Sporulation integral membrane protein YlbJ
MUA31_RS03940	COG2329	Antibiotic biosynthesis monooxygenase
MUA31_RS03960	COG1988	membrane-bound metal-dependent
MUA31_RS03965	COG4284	Utp--glucose-1-phosphate uridylyltransferase
MUA31_RS03970	COG1272	protein, Hemolysin III
MUA31_RS03985	COG2814	Major facilitator Superfamily
MUA31_RS03990	COG0489	protein tyrosine kinase activity
MUA31_RS04040	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MUA31_RS04045	COG4856	YbbR-like protein
MUA31_RS04050	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUA31_RS04055	COG0246	Mannitol dehydrogenase
MUA31_RS04060	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA31_RS04065	COG3711	transcriptional antiterminator
MUA31_RS04080	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MUA31_RS04105	COG0640	Transcriptional regulator
MUA31_RS04110	COG0702	epimerase
MUA31_RS04115	COG2186	Transcriptional regulator
MUA31_RS04120	COG0247	lactate metabolic process
MUA31_RS04125	COG1139	Iron-sulfur cluster binding protein
MUA31_RS04130	COG1556	Lactate utilization protein
MUA31_RS04135	COG1482	cell wall glycoprotein biosynthetic process
MUA31_RS04155	COG0783	Belongs to the Dps family
MUA31_RS04160	COG1876	peptidase activity
MUA31_RS04165	COG0813	purine-nucleoside phosphorylase activity
MUA31_RS04170	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
MUA31_RS04190	COG1854	S-ribosylhomocysteine lyase activity
MUA31_RS04220	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUA31_RS04225	COG3343	RNA polymerase activity
MUA31_RS04230	COG0504	CTP synthase activity
MUA31_RS04240	COG0191	fructose-bisphosphate aldolase activity
MUA31_RS04245	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUA31_RS04250	COG1733	regulation of RNA biosynthetic process
MUA31_RS04255	COG1012	belongs to the aldehyde dehydrogenase family
MUA31_RS04260	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
MUA31_RS04265	COG0254	rRNA binding
MUA31_RS04270	COG1435	thymidine kinase activity
MUA31_RS04275	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MUA31_RS04280	COG2890	protein-(glutamine-N5) methyltransferase activity
MUA31_RS04285	COG0009	L-threonylcarbamoyladenylate synthase
MUA31_RS04290	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUA31_RS04295	COG4475	Protein of unknown function (DUF436)
MUA31_RS04300	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MUA31_RS04305	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
MUA31_RS04310	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MUA31_RS04320	COG0356	it plays a direct role in the translocation of protons across the membrane
MUA31_RS04325	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUA31_RS04330	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
MUA31_RS04335	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUA31_RS04340	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
MUA31_RS04345	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
MUA31_RS04350	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MUA31_RS04355	COG0355	proton-transporting ATP synthase activity, rotational mechanism
MUA31_RS04365	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUA31_RS04370	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
MUA31_RS04380	COG0629	single-stranded DNA binding
MUA31_RS04385	COG1388	LysM domain
MUA31_RS04400	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MUA31_RS04410	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
MUA31_RS04415	COG0352	thiamine-phosphate diphosphorylase activity
MUA31_RS04420	COG0706	membrane insertase activity
MUA31_RS04425	COG0456	acetyltransferase
MUA31_RS04435	COG1418	mRNA catabolic process
MUA31_RS04440	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUA31_RS04445	COG1937	Protein conserved in bacteria
MUA31_RS04460	COG2217	Heavy metal translocating P-type atpase
MUA31_RS04470	COG0772	Belongs to the SEDS family
MUA31_RS04475	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUA31_RS04480	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MUA31_RS04485	COG0513	Belongs to the DEAD box helicase family
MUA31_RS04505	COG0736	holo-[acyl-carrier-protein] synthase activity
MUA31_RS04510	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MUA31_RS04525	COG2208	phosphoserine phosphatase activity
MUA31_RS04540	COG1191	sigma factor activity
MUA31_RS04545	COG2183	response to ionizing radiation
MUA31_RS04550	COG3091	SprT-like family
MUA31_RS04580	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MUA31_RS04590	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
MUA31_RS04595	COG0473	3-isopropylmalate dehydrogenase activity
MUA31_RS04600	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MUA31_RS04605	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
MUA31_RS04615	COG0028	Belongs to the TPP enzyme family
MUA31_RS04620	COG0129	dihydroxy-acid dehydratase activity
MUA31_RS04625	COG0802	atpase or kinase
MUA31_RS04630	COG1214	PFAM Peptidase M22, glycoprotease
MUA31_RS04635	COG0456	acetyltransferase
MUA31_RS04640	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MUA31_RS04645	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MUA31_RS04650	COG0488	(ABC) transporter
MUA31_RS04655	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
MUA31_RS04665	COG0425	Belongs to the sulfur carrier protein TusA family
MUA31_RS04670	COG2391	methyltransferase activity
MUA31_RS04675	COG1621	beta-fructofuranosidase activity
MUA31_RS04695	COG4512	PFAM Accessory gene regulator B
MUA31_RS04720	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MUA31_RS04725	COG0459	protein refolding
MUA31_RS04745	COG1725	Transcriptional regulator
MUA31_RS04760	COG1131	(ABC) transporter
MUA31_RS04790	COG1136	(ABC) transporter
MUA31_RS04815	COG2706	6-phosphogluconolactonase activity
MUA31_RS04820	COG0471	metal ion transport
MUA31_RS04830	COG1335	isochorismatase
MUA31_RS04835	COG1227	inorganic diphosphatase activity
MUA31_RS04840	COG1012	belongs to the aldehyde dehydrogenase family
MUA31_RS04845	COG0077	Prephenate dehydratase
MUA31_RS04855	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MUA31_RS04860	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
MUA31_RS04865	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
MUA31_RS04875	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MUA31_RS04880	COG4496	protein, YerC YecD
MUA31_RS04885	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
MUA31_RS04895	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MUA31_RS04900	COG4851	CamS sex pheromone cAM373 precursor
MUA31_RS04910	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA31_RS04915	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUA31_RS04920	COG0154	amidase activity
MUA31_RS04925	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUA31_RS04930	COG1597	lipid kinase activity
MUA31_RS04935	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MUA31_RS04945	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUA31_RS04965	COG4129	membrane
MUA31_RS04970	COG0024	Methionine aminopeptidase
MUA31_RS04990	COG2197	response regulator
MUA31_RS04995	COG0288	reversible hydration of carbon dioxide
MUA31_RS05000	COG1295	ribonuclease BN
MUA31_RS05015	COG4840	Belongs to the UPF0435 family
MUA31_RS05020	COG2309	aminopeptidase activity
MUA31_RS05025	COG1607	acyl-coa hydrolase
MUA31_RS05030	COG0535	radical SAM domain protein
MUA31_RS05040	COG0693	protein deglycase activity
MUA31_RS05045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA31_RS05050	COG2137	regulation of response to DNA damage stimulus
MUA31_RS05060	COG1134	teichoic acid transport
MUA31_RS05060	COG1388	LysM domain
MUA31_RS05070	COG1988	membrane-bound metal-dependent
MUA31_RS05080	COG3557	Belongs to the UPF0374 family
MUA31_RS05090	COG4129	membrane
MUA31_RS05095	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUA31_RS05100	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MUA31_RS05105	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA31_RS05110	COG0735	belongs to the Fur family
MUA31_RS05280	COG0765	amino acid transport
MUA31_RS05285	COG1126	abc transporter atp-binding protein
MUA31_RS05290	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
MUA31_RS05295	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUA31_RS05305	COG0363	glucosamine-6-phosphate deaminase activity
MUA31_RS05315	COG0114	fumarate hydratase activity
MUA31_RS05320	COG0564	pseudouridine synthase activity
MUA31_RS05325	COG2203	Gaf domain
MUA31_RS05325	COG4585	Histidine kinase
MUA31_RS05330	COG2197	response regulator
MUA31_RS05345	COG4399	Belongs to the UPF0754 family
MUA31_RS05355	COG0420	3'-5' exonuclease activity
MUA31_RS05365	COG3481	metal-dependent phosphohydrolase, HD sub domain
MUA31_RS05370	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MUA31_RS05385	COG0537	adenosine 5'-monophosphoramidase activity
MUA31_RS05390	COG1131	(ABC) transporter
MUA31_RS05405	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
MUA31_RS05410	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
MUA31_RS05415	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
MUA31_RS05430	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MUA31_RS05435	COG0157	Belongs to the NadC ModD family
MUA31_RS05440	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
MUA31_RS05450	COG1827	regulation of RNA biosynthetic process
MUA31_RS05515	COG0318	PFAM AMP-dependent synthetase and ligase
MUA31_RS05525	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
MUA31_RS05530	COG0494	nUDIX hydrolase
MUA31_RS05535	COG1506	peptidase
MUA31_RS05540	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
MUA31_RS05545	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MUA31_RS05555	COG0656	L-ascorbic acid biosynthetic process
MUA31_RS05560	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUA31_RS05575	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MUA31_RS05590	COG1595	DNA-templated transcription, initiation
MUA31_RS05600	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA31_RS05600	COG3266	domain, Protein
MUA31_RS05600	COG4193	domain, Protein
MUA31_RS05610	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUA31_RS05610	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUA31_RS05615	COG0307	riboflavin synthase, alpha
MUA31_RS05625	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
MUA31_RS05630	COG0506	proline dehydrogenase activity
MUA31_RS05635	COG2267	carboxylic ester hydrolase activity
MUA31_RS05640	COG0039	L-malate dehydrogenase activity
MUA31_RS05650	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
MUA31_RS05655	COG1242	4 iron, 4 sulfur cluster binding
MUA31_RS05660	COG2814	Major facilitator Superfamily
MUA31_RS05670	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUA31_RS05675	COG2081	HI0933 family
MUA31_RS05680	COG2244	polysaccharide biosynthetic process
MUA31_RS05685	COG1187	pseudouridine synthase activity
MUA31_RS05700	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA31_RS05710	COG0510	thiamine kinase activity
MUA31_RS05715	COG0220	tRNA (guanine-N7-)-methyltransferase activity
MUA31_RS05720	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUA31_RS05730	COG1363	Peptidase, m42
MUA31_RS05735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA31_RS05740	COG4848	Belongs to the UPF0354 family
MUA31_RS05745	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA31_RS05750	COG1674	ftsk spoiiie
MUA31_RS05755	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
MUA31_RS05760	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
MUA31_RS05770	COG1605	Chorismate mutase
MUA31_RS05770	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
MUA31_RS05775	COG1609	Transcriptional regulator
MUA31_RS05785	COG0454	-acetyltransferase
MUA31_RS05790	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUA31_RS05795	COG2759	Belongs to the formate--tetrahydrofolate ligase family
MUA31_RS05805	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MUA31_RS05810	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUA31_RS05815	COG0204	Acyl-transferase
MUA31_RS05820	COG1263	PTS System
MUA31_RS05820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS05830	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MUA31_RS05835	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MUA31_RS05840	COG1764	response to oxidative stress
MUA31_RS05845	COG0584	glycerophosphoryl diester phosphodiesterase
MUA31_RS05855	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
MUA31_RS05860	COG1956	GAF domain-containing protein
MUA31_RS05865	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
MUA31_RS05870	COG1104	cysteine desulfurase activity
MUA31_RS05875	COG0301	tRNA thio-modification
MUA31_RS05880	COG0730	response to heat
MUA31_RS05890	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
MUA31_RS05895	COG0827	DNA restriction-modification system
MUA31_RS05900	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MUA31_RS05905	COG0589	response to stress
MUA31_RS05915	COG0006	proline dipeptidase activity
MUA31_RS05920	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
MUA31_RS05930	COG4109	DRTGG domain
MUA31_RS05935	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MUA31_RS05940	COG0587	DNA-directed DNA polymerase activity
MUA31_RS05945	COG0281	malic enzyme
MUA31_RS05950	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
MUA31_RS05955	COG0825	malonyl-CoA metabolic process
MUA31_RS05960	COG0205	6-phosphofructokinase activity
MUA31_RS05965	COG0469	pyruvate kinase activity
MUA31_RS05970	COG1113	amino acid transport
MUA31_RS05975	COG0372	Belongs to the citrate synthase family
MUA31_RS05980	COG0538	isocitrate dehydrogenase activity
MUA31_RS05985	COG0745	RESPONSE REGULATOR receiver
MUA31_RS05990	COG5002	protein histidine kinase activity
MUA31_RS05995	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA31_RS05995	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA31_RS06005	COG0237	dephospho-CoA kinase activity
MUA31_RS06015	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MUA31_RS06025	COG1484	DNA-dependent DNA replication
MUA31_RS06030	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUA31_RS06035	COG0833	amino acid
MUA31_RS06040	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MUA31_RS06045	COG0291	Belongs to the bacterial ribosomal protein bL35 family
MUA31_RS06050	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
MUA31_RS06055	COG4112	unkown
MUA31_RS06065	COG0544	peptidyl-prolyl cis-trans isomerase activity
MUA31_RS06070	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
MUA31_RS06075	COG0218	Necessary for normal cell division and for the maintenance of normal septation
MUA31_RS06080	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
MUA31_RS06085	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MUA31_RS06090	COG0181	hydroxymethylbilane synthase activity
MUA31_RS06105	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUA31_RS06115	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
MUA31_RS06130	COG2818	Glycosylase
MUA31_RS06135	COG0525	valine-tRNA ligase activity
MUA31_RS06140	COG0285	dihydrofolate synthase activity
MUA31_RS06145	COG2003	Belongs to the UPF0758 family
MUA31_RS06180	COG2868	ribosomal protein
MUA31_RS06190	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
MUA31_RS06195	COG4492	Belongs to the UPF0735 family
MUA31_RS06200	COG0632	four-way junction helicase activity
MUA31_RS06205	COG2255	four-way junction helicase activity
MUA31_RS06215	COG0343	queuine tRNA-ribosyltransferase activity
MUA31_RS06220	COG1862	Preprotein translocase
MUA31_RS06225	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUA31_RS06225	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUA31_RS06230	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
MUA31_RS06230	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MUA31_RS06235	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA31_RS06245	COG1490	D-aminoacyl-tRNA deacylase activity
MUA31_RS06250	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUA31_RS06255	COG0124	histidyl-tRNA synthetase
MUA31_RS06260	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
MUA31_RS06270	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MUA31_RS06275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MUA31_RS06280	COG1959	2 iron, 2 sulfur cluster binding
MUA31_RS06290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA31_RS06295	COG1104	cysteine desulfurase activity
MUA31_RS06300	COG0482	sulfurtransferase activity
MUA31_RS06310	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MUA31_RS06315	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MUA31_RS06320	COG4472	Bacterial protein of unknown function (DUF965)
MUA31_RS06325	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MUA31_RS06335	COG4122	O-methyltransferase activity
MUA31_RS06340	COG0826	peptidase U32
MUA31_RS06345	COG0826	peptidase U32
MUA31_RS06350	COG0572	uridine kinase
MUA31_RS06355	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
MUA31_RS06360	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MUA31_RS06365	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
MUA31_RS06370	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MUA31_RS06375	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUA31_RS06380	COG1534	Rna-binding protein
MUA31_RS06390	COG1713	HD superfamily hydrolase involved in NAD metabolism
MUA31_RS06395	COG0799	negative regulation of ribosome biogenesis
MUA31_RS06405	COG1555	photosystem II stabilization
MUA31_RS06405	COG1596	polysaccharide export
MUA31_RS06410	COG2131	deaminase
MUA31_RS06415	COG0658	competence protein
MUA31_RS06415	COG2333	competence protein COMEC
MUA31_RS06425	COG0268	Binds directly to 16S ribosomal RNA
MUA31_RS06430	COG0481	GTPase activity
MUA31_RS06435	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MUA31_RS06440	COG1420	regulation of RNA biosynthetic process
MUA31_RS06445	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MUA31_RS06450	COG0443	Heat shock 70 kDa protein
MUA31_RS06455	COG0484	heat shock protein binding
MUA31_RS06460	COG2264	protein methyltransferase activity
MUA31_RS06465	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MUA31_RS06470	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUA31_RS06485	COG4864	UPF0365 protein
MUA31_RS06495	COG1702	phosphate starvation-inducible protein PhoH
MUA31_RS06500	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
MUA31_RS06505	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
MUA31_RS06515	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MUA31_RS06520	COG1381	Involved in DNA repair and RecF pathway recombination
MUA31_RS06525	COG0423	glycine-tRNA ligase activity
MUA31_RS06530	COG0517	IMP dehydrogenase activity
MUA31_RS06535	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
MUA31_RS06545	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
MUA31_RS06550	COG2384	SAM-dependent methyltransferase
MUA31_RS06560	COG0513	Belongs to the DEAD box helicase family
MUA31_RS06565	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
MUA31_RS06570	COG1121	(ABC) transporter
MUA31_RS06575	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUA31_RS06580	COG0735	belongs to the Fur family
MUA31_RS06590	COG0768	penicillin binding
MUA31_RS06595	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MUA31_RS06605	COG4483	Protein conserved in bacteria
MUA31_RS06610	COG1940	carbohydrate kinase activity
MUA31_RS06615	COG0011	TIGRFAM Protein of
MUA31_RS06620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUA31_RS06625	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
MUA31_RS06630	COG1459	type II secretion system
MUA31_RS06655	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUA31_RS06660	COG0404	The glycine cleavage system catalyzes the degradation of glycine
MUA31_RS06665	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUA31_RS06670	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUA31_RS06675	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUA31_RS06680	COG0095	Lipoate-protein ligase
MUA31_RS06695	COG0006	proline dipeptidase activity
MUA31_RS06700	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MUA31_RS06705	COG0511	ligase activity, forming carbon-carbon bonds
MUA31_RS06710	COG0439	Biotin carboxylase
MUA31_RS06720	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUA31_RS06725	COG1570	exodeoxyribonuclease VII activity
MUA31_RS06730	COG1722	exodeoxyribonuclease VII activity
MUA31_RS06740	COG1438	arginine binding
MUA31_RS06745	COG0497	DNA recombination
MUA31_RS06750	COG0280	phosphate acetyltransferase
MUA31_RS06760	COG3426	butyrate kinase activity
MUA31_RS06765	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA31_RS06770	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA31_RS06775	COG0022	dehydrogenase e1 component
MUA31_RS06780	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA31_RS06790	COG4129	membrane
MUA31_RS06795	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUA31_RS06810	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUA31_RS06815	COG1234	tRNA 3'-trailer cleavage
MUA31_RS06820	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MUA31_RS06830	COG0667	Aldo Keto reductase
MUA31_RS06840	COG0735	belongs to the Fur family
MUA31_RS06845	COG4974	Belongs to the 'phage' integrase family
MUA31_RS06855	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MUA31_RS06860	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MUA31_RS06865	COG1187	pseudouridine synthase activity
MUA31_RS06870	COG0745	RESPONSE REGULATOR receiver
MUA31_RS06885	COG1141	Ferredoxin
MUA31_RS06895	COG0514	ATP-dependent DNA helicase (RecQ)
MUA31_RS06905	COG0492	ferredoxin-NADP+ reductase activity
MUA31_RS06915	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
MUA31_RS06925	COG1160	GTP binding
MUA31_RS06930	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
MUA31_RS06945	COG2226	methyltransferase
MUA31_RS06950	COG0142	geranyltranstransferase activity
MUA31_RS06955	COG0105	UTP biosynthetic process
MUA31_RS06960	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
MUA31_RS06965	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
MUA31_RS06970	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MUA31_RS06980	COG5582	Belongs to the UPF0302 family
MUA31_RS06985	COG4347	Protein of unknown function (DUF1405)
MUA31_RS06990	COG2738	Putative neutral zinc metallopeptidase
MUA31_RS07000	COG1694	Mazg nucleotide pyrophosphohydrolase
MUA31_RS07005	COG0438	transferase activity, transferring glycosyl groups
MUA31_RS07010	COG0617	tRNA 3'-terminal CCA addition
MUA31_RS07020	COG1199	ATP-dependent helicase activity
MUA31_RS07020	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MUA31_RS07025	COG0017	Asparaginyl-tRNA synthetase
MUA31_RS07030	COG3935	DnaD domain protein
MUA31_RS07035	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MUA31_RS07045	COG4499	WXG100 protein secretion system (Wss), protein YukC
MUA31_RS07045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA31_RS07050	COG3331	DNA recombination
MUA31_RS07060	COG4474	Belongs to the UPF0398 family
MUA31_RS07065	COG3599	regulation of cell shape
MUA31_RS07075	COG0116	Belongs to the methyltransferase superfamily
MUA31_RS07080	COG2962	Rard protein
MUA31_RS07085	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
MUA31_RS07090	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA31_RS07100	COG0328	RNA-DNA hybrid ribonuclease activity
MUA31_RS07105	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
MUA31_RS07115	COG1413	lyase activity
MUA31_RS07145	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUA31_RS07150	COG2190	(PTS) system
MUA31_RS07170	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUA31_RS07175	COG0671	phosphoesterase, PA-phosphatase related
MUA31_RS07185	COG0745	RESPONSE REGULATOR receiver
MUA31_RS07190	COG5002	protein histidine kinase activity
MUA31_RS07195	COG0567	Dehydrogenase, E1 component
MUA31_RS07225	COG0714	Associated with various cellular activities
MUA31_RS07230	COG4548	von Willebrand factor, type A
MUA31_RS07235	COG1114	Component of the transport system for branched-chain amino acids
MUA31_RS07240	COG1597	lipid kinase activity
MUA31_RS07245	COG3853	Toxic anion resistance protein (TelA)
MUA31_RS07265	COG1278	Cold shock
MUA31_RS07280	COG1473	amidohydrolase
MUA31_RS07290	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
MUA31_RS07295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUA31_RS07300	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MUA31_RS07310	COG0488	(ABC) transporter
MUA31_RS07315	COG2996	Protein conserved in bacteria
MUA31_RS07320	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
MUA31_RS07325	COG0573	inorganic phosphate transmembrane transporter activity
MUA31_RS07330	COG0581	inorganic phosphate transmembrane transporter activity
MUA31_RS07335	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUA31_RS07340	COG0704	Plays a role in the regulation of phosphate uptake
MUA31_RS07345	COG1164	Oligoendopeptidase f
MUA31_RS07355	COG0747	negative chemotaxis
MUA31_RS07385	COG2348	transferase activity, transferring amino-acyl groups
MUA31_RS07390	COG2348	transferase activity, transferring amino-acyl groups
MUA31_RS07395	COG0159	tryptophan synthase activity
MUA31_RS07400	COG0133	tryptophan synthase activity
MUA31_RS07405	COG0135	phosphoribosylanthranilate isomerase activity
MUA31_RS07410	COG0134	indole-3-glycerol-phosphate synthase activity
MUA31_RS07415	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MUA31_RS07420	COG0512	Glutamine amidotransferase of anthranilate synthase
MUA31_RS07425	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MUA31_RS07430	COG1363	Peptidase, m42
MUA31_RS07435	COG0287	Prephenate dehydrogenase
MUA31_RS07440	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUA31_RS07460	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
MUA31_RS07475	COG0628	permease
MUA31_RS07480	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS07480	COG2190	(PTS) system
MUA31_RS07480	COG1263	PTS System
MUA31_RS07485	COG2190	(PTS) system
MUA31_RS07485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS07485	COG1263	PTS System
MUA31_RS07490	COG3711	transcriptional antiterminator
MUA31_RS07495	COG1115	amino acid carrier protein
MUA31_RS07500	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUA31_RS07515	COG4841	protein insertion into membrane
MUA31_RS07525	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MUA31_RS07530	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA31_RS07535	COG1970	mechanosensitive ion channel activity
MUA31_RS07545	COG0420	3'-5' exonuclease activity
MUA31_RS07550	COG4846	Membrane protein involved in cytochrome C biogenesis
MUA31_RS07555	COG3763	UPF0154 protein
MUA31_RS07560	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
MUA31_RS07565	COG4224	UPF0291 protein
MUA31_RS07575	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MUA31_RS07585	COG2249	NAD(P)H dehydrogenase (quinone) activity
MUA31_RS07595	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUA31_RS07600	COG1621	beta-fructofuranosidase activity
MUA31_RS07605	COG1609	Transcriptional regulator
MUA31_RS07610	COG2340	Cysteine-rich secretory protein family
MUA31_RS07615	COG0516	GMP reductase activity
MUA31_RS07620	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUA31_RS07630	COG0833	amino acid
MUA31_RS07645	COG0083	homoserine kinase activity
MUA31_RS07650	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MUA31_RS07655	COG0460	homoserine dehydrogenase
MUA31_RS07660	COG0527	aspartate kinase activity
MUA31_RS07690	COG1525	nuclease
MUA31_RS07700	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUA31_RS07705	COG0789	Transcriptional regulator
MUA31_RS07720	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
MUA31_RS07725	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MUA31_RS07730	COG0386	Belongs to the glutathione peroxidase family
MUA31_RS07735	COG1388	LysM domain
MUA31_RS07735	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA31_RS07775	COG0739	heme binding
MUA31_RS07865	COG0756	dUTP diphosphatase activity
MUA31_RS07915	COG1484	DNA-dependent DNA replication
MUA31_RS07985	COG3617	BRO family, N-terminal domain
MUA31_RS08000	COG3645	SOS response
MUA31_RS08000	COG3646	Phage regulatory protein
MUA31_RS08035	COG0582	viral genome integration into host DNA
MUA31_RS08040	COG1923	regulation of RNA biosynthetic process
MUA31_RS08045	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
MUA31_RS08055	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
MUA31_RS08060	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MUA31_RS08065	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MUA31_RS08075	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
MUA31_RS08080	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MUA31_RS08085	COG0584	glycerophosphoryl diester phosphodiesterase
MUA31_RS08095	COG4550	Control of competence regulator ComK, YlbF/YmcA
MUA31_RS08100	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUA31_RS08105	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUA31_RS08110	COG0601	transmembrane transport
MUA31_RS08115	COG4608	Belongs to the ABC transporter superfamily
MUA31_RS08120	COG0444	Belongs to the ABC transporter superfamily
MUA31_RS08125	COG0747	negative chemotaxis
MUA31_RS08140	COG1013	pyruvate-flavodoxin oxidoreductase activity
MUA31_RS08145	COG0674	pyruvate-flavodoxin oxidoreductase activity
MUA31_RS08145	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
MUA31_RS08150	COG1692	metallophosphoesterase
MUA31_RS08160	COG0583	DNA-binding transcription factor activity
MUA31_RS08170	COG1418	mRNA catabolic process
MUA31_RS08175	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
MUA31_RS08180	COG1546	Belongs to the CinA family
MUA31_RS08180	COG1058	Belongs to the CinA family
MUA31_RS08200	COG0300	oxidoreductase activity
MUA31_RS08205	COG0612	Peptidase, M16
MUA31_RS08210	COG0612	Peptidase, M16
MUA31_RS08215	COG2188	Transcriptional regulator
MUA31_RS08225	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUA31_RS08230	COG1185	polyribonucleotide nucleotidyltransferase activity
MUA31_RS08235	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
MUA31_RS08240	COG0196	riboflavin kinase activity
MUA31_RS08245	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MUA31_RS08255	COG3850	Histidine kinase
MUA31_RS08255	COG5002	protein histidine kinase activity
MUA31_RS08260	COG0745	RESPONSE REGULATOR receiver
MUA31_RS08275	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MUA31_RS08285	COG0584	glycerophosphoryl diester phosphodiesterase
MUA31_RS08295	COG0235	Class ii aldolase
MUA31_RS08300	COG3623	hexulose-6-phosphate isomerase
MUA31_RS08320	COG3037	sugar-specific permease SgaT UlaA
MUA31_RS08335	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
MUA31_RS08340	COG1358	cellular component organization or biogenesis
MUA31_RS08345	COG2740	Nucleic-acid-binding protein implicated in transcription termination
MUA31_RS08350	COG0195	Participates in both transcription termination and antitermination
MUA31_RS08355	COG0779	Required for maturation of 30S ribosomal subunits
MUA31_RS08365	COG0442	prolyl-tRNA aminoacylation
MUA31_RS08375	COG4589	Belongs to the CDS family
MUA31_RS08385	COG0233	cytoplasmic translational termination
MUA31_RS08390	COG0528	UMP kinase activity
MUA31_RS08400	COG0052	Belongs to the universal ribosomal protein uS2 family
MUA31_RS08405	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
MUA31_RS08410	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
MUA31_RS08415	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
MUA31_RS08420	COG4974	Belongs to the 'phage' integrase family
MUA31_RS08425	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
MUA31_RS08430	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUA31_RS08435	COG0758	DNA mediated transformation
MUA31_RS08440	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUA31_RS08445	COG0045	succinate-CoA ligase (ADP-forming) activity
MUA31_RS08450	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUA31_RS08485	COG1349	DNA-binding transcription factor activity
MUA31_RS08495	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUA31_RS08500	COG4485	Bacterial membrane protein, YfhO
MUA31_RS08515	COG0335	large ribosomal subunit rRNA binding
MUA31_RS08520	COG0336	Belongs to the RNA methyltransferase TrmD family
MUA31_RS08525	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MUA31_RS08530	COG0228	four-way junction DNA binding
MUA31_RS08535	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MUA31_RS08540	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
MUA31_RS08545	COG0552	protein localization to endoplasmic reticulum
MUA31_RS08550	COG1196	nuclear chromosome segregation
MUA31_RS08555	COG0571	ribonuclease III activity
MUA31_RS08560	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUA31_RS08575	COG0416	fatty acid biosynthetic process
MUA31_RS08580	COG1349	DNA-binding transcription factor activity
MUA31_RS08590	COG1760	l-serine dehydratase
MUA31_RS08595	COG1760	l-serine dehydratase
MUA31_RS08600	COG1461	Dihydroxyacetone kinase
MUA31_RS08605	COG1302	Protein conserved in bacteria
MUA31_RS08615	COG1564	THIamine pyrophosphokinase
MUA31_RS08620	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MUA31_RS08625	COG1162	GTPase activity
MUA31_RS08635	COG0631	protein serine/threonine phosphatase activity
MUA31_RS08640	COG0820	rRNA (adenine-C2-)-methyltransferase activity
MUA31_RS08645	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
MUA31_RS08645	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUA31_RS08650	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MUA31_RS08700	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MUA31_RS08705	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
MUA31_RS08740	COG2910	NAD(P)H-binding
MUA31_RS08745	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MUA31_RS08750	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MUA31_RS08765	COG1758	RNA polymerase activity
MUA31_RS08770	COG0194	GDP metabolic process
MUA31_RS08795	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MUA31_RS08800	COG0284	orotidine-5'-phosphate decarboxylase activity
MUA31_RS08805	COG0167	dihydroorotate dehydrogenase activity
MUA31_RS08810	COG0543	2 iron, 2 sulfur cluster binding
MUA31_RS08815	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUA31_RS08820	COG0505	Belongs to the CarA family
MUA31_RS08830	COG0540	Belongs to the ATCase OTCase family
MUA31_RS08840	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MUA31_RS08850	COG0564	pseudouridine synthase activity
MUA31_RS08855	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MUA31_RS08865	COG2514	catechol 2,3-dioxygenase activity
MUA31_RS08870	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MUA31_RS08875	COG3599	regulation of cell shape
MUA31_RS08885	COG0762	integral membrane protein
MUA31_RS08890	COG1799	cell septum assembly
MUA31_RS08895	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MUA31_RS08910	COG0849	cell division
MUA31_RS08920	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUA31_RS08925	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUA31_RS08930	COG0768	penicillin binding
MUA31_RS08935	COG4839	cell division protein FtsL
MUA31_RS08940	COG0275	rRNA processing
MUA31_RS08945	COG2001	Belongs to the MraZ family
MUA31_RS08950	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
MUA31_RS08955	COG0454	-acetyltransferase
MUA31_RS08960	COG1011	Hydrolase
MUA31_RS08980	COG1388	LysM domain
MUA31_RS08980	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA31_RS09130	COG0756	dUTP diphosphatase activity
MUA31_RS09170	COG1484	DNA-dependent DNA replication
MUA31_RS09275	COG0582	viral genome integration into host DNA
MUA31_RS09290	COG2176	DNA-directed DNA polymerase activity
MUA31_RS09305	COG0346	lactoylglutathione lyase activity
MUA31_RS09320	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MUA31_RS09330	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MUA31_RS09335	COG1053	succinate dehydrogenase
MUA31_RS09340	COG2009	succinate dehydrogenase
MUA31_RS09345	COG0322	excinuclease ABC activity
MUA31_RS09350	COG3118	belongs to the thioredoxin family
MUA31_RS09355	COG1193	negative regulation of DNA recombination
MUA31_RS09360	COG1796	DNA polymerase
MUA31_RS09360	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MUA31_RS09375	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUA31_RS09380	COG0072	phenylalanine-tRNA ligase activity
MUA31_RS09380	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA31_RS09385	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MUA31_RS09390	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUA31_RS09395	COG0333	Belongs to the bacterial ribosomal protein bL32 family
MUA31_RS09405	COG1323	Belongs to the UPF0348 family
MUA31_RS09420	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MUA31_RS09425	COG0742	ribosomal rna small subunit methyltransferase
MUA31_RS09440	COG0584	glycerophosphoryl diester phosphodiesterase
MUA31_RS09445	COG3679	Belongs to the UPF0342 family
MUA31_RS09460	COG0109	protoheme IX farnesyltransferase activity
MUA31_RS09465	COG1612	heme a metabolic process
MUA31_RS09475	COG0772	Belongs to the SEDS family
MUA31_RS09480	COG4838	Belongs to the UPF0358 family
MUA31_RS09485	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MUA31_RS09495	COG1217	gtp-binding protein TYPA
MUA31_RS09505	COG0483	inositol monophosphate 1-phosphatase activity
MUA31_RS09510	COG4493	Belongs to the UPF0637 family
MUA31_RS09515	COG1914	H( )-stimulated, divalent metal cation uptake system
MUA31_RS09540	COG1177	transmembrane transport
MUA31_RS09545	COG1176	ABC-type spermidine putrescine transport system, permease component I
MUA31_RS09560	COG4476	Belongs to the UPF0223 family
MUA31_RS09590	COG0242	peptide deformylase activity
MUA31_RS09600	COG5503	Protein of unknown function (DUF1447)
MUA31_RS09610	COG0569	domain protein
MUA31_RS09615	COG1294	oxidase, subunit
MUA31_RS09620	COG1271	oxidase subunit
MUA31_RS09630	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUA31_RS09645	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
MUA31_RS09660	COG1122	ATPase activity
MUA31_RS09665	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MUA31_RS09675	COG0151	Belongs to the GarS family
MUA31_RS09680	COG0138	bifunctional purine biosynthesis protein purh
MUA31_RS09690	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
MUA31_RS09695	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
MUA31_RS09700	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUA31_RS09705	COG0047	phosphoribosylformylglycinamidine synthase activity
MUA31_RS09710	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUA31_RS09715	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
MUA31_RS09720	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MUA31_RS09725	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MUA31_RS09730	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
MUA31_RS09735	COG1363	Peptidase, m42
MUA31_RS09740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MUA31_RS09740	COG1017	nitric oxide dioxygenase activity
MUA31_RS09750	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MUA31_RS09760	COG1845	cytochrome c oxidase, subunit III
MUA31_RS09765	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
MUA31_RS09775	COG1349	DNA-binding transcription factor activity
MUA31_RS09785	COG0698	ribose 5-phosphate isomerase
MUA31_RS09790	COG1105	Belongs to the carbohydrate kinase PfkB family
MUA31_RS09810	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUA31_RS09815	COG2723	6-phospho-beta-galactosidase activity
MUA31_RS09820	COG1447	Phosphotransferase system cellobiose-specific component IIA
MUA31_RS09840	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUA31_RS09845	COG1959	2 iron, 2 sulfur cluster binding
MUA31_RS09855	COG1316	TRANSCRIPTIONal
MUA31_RS09880	COG3594	Acyltransferase
MUA31_RS09885	COG0436	Aminotransferase
MUA31_RS09895	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MUA31_RS09900	COG0596	Alpha beta hydrolase
MUA31_RS09905	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
MUA31_RS09910	COG1169	isochorismate synthase
MUA31_RS09915	COG1575	Belongs to the MenA family. Type 1 subfamily
MUA31_RS09925	COG2314	TM2 domain
MUA31_RS09940	COG4873	Protein conserved in bacteria
MUA31_RS10025	COG4509	Sortase family
MUA31_RS10030	COG1120	ATPase activity
MUA31_RS10060	COG1129	ABC transporter
MUA31_RS10090	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MUA31_RS10095	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MUA31_RS10100	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUA31_RS10105	COG0131	Imidazoleglycerol-phosphate dehydratase
MUA31_RS10110	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MUA31_RS10115	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
MUA31_RS10120	COG0107	imidazoleglycerol-phosphate synthase activity
MUA31_RS10125	COG0140	phosphoribosyl-ATP diphosphatase activity
MUA31_RS10125	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MUA31_RS10130	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUA31_RS10135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUA31_RS10140	COG0861	Integral membrane protein TerC family
MUA31_RS10145	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MUA31_RS10160	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUA31_RS10165	COG2814	Major facilitator Superfamily
MUA31_RS10175	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
MUA31_RS10180	COG2382	esterase
MUA31_RS10185	COG1115	amino acid carrier protein
MUA31_RS10190	COG0628	permease
MUA31_RS10195	COG2814	Major facilitator Superfamily
MUA31_RS10205	COG0569	domain protein
MUA31_RS10205	COG0475	glutathione-regulated potassium exporter activity
MUA31_RS10210	COG2239	Acts as a magnesium transporter
MUA31_RS10215	COG0564	pseudouridine synthase activity
MUA31_RS10220	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MUA31_RS10225	COG2357	RelA SpoT domain protein
MUA31_RS10235	COG4116	CYTH
MUA31_RS10240	COG2346	COG2346, Truncated hemoglobins
MUA31_RS10260	COG1164	Oligoendopeptidase f
MUA31_RS10265	COG2814	Major facilitator Superfamily
MUA31_RS10270	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUA31_RS10305	COG4862	establishment of competence for transformation
MUA31_RS10310	COG1393	Belongs to the ArsC family
MUA31_RS10315	COG0180	Tryptophanyl-tRNA synthetase
MUA31_RS10320	COG4166	transmembrane transport
MUA31_RS10325	COG4608	Belongs to the ABC transporter superfamily
MUA31_RS10330	COG0444	Belongs to the ABC transporter superfamily
MUA31_RS10335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUA31_RS10340	COG0601	transmembrane transport
MUA31_RS10350	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
MUA31_RS10355	COG0454	-acetyltransferase
MUA31_RS10360	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA31_RS10365	COG4166	transmembrane transport
MUA31_RS10370	COG4608	Belongs to the ABC transporter superfamily
MUA31_RS10375	COG0444	Belongs to the ABC transporter superfamily
MUA31_RS10380	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUA31_RS10385	COG0601	transmembrane transport
MUA31_RS10400	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUA31_RS10425	COG0561	phosphatase activity
MUA31_RS10445	COG1074	ATP-dependent DNA helicase activity
MUA31_RS10450	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
MUA31_RS10465	COG0398	Pfam SNARE associated Golgi protein
MUA31_RS10470	COG0166	Belongs to the GPI family
MUA31_RS10475	COG0137	argininosuccinate synthase activity
MUA31_RS10480	COG0165	Argininosuccinate lyase
MUA31_RS10490	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUA31_RS10495	COG1012	belongs to the aldehyde dehydrogenase family
MUA31_RS10500	COG1902	pentaerythritol trinitrate reductase activity
MUA31_RS10505	COG1098	S1 RNA binding domain
MUA31_RS10525	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MUA31_RS10535	COG2111	Na H antiporter
MUA31_RS10535	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA31_RS10540	COG2111	Na H antiporter
MUA31_RS10545	COG1006	Multisubunit Na H antiporter MnhC subunit
MUA31_RS10550	COG0651	ATP synthesis coupled electron transport
MUA31_RS10555	COG1863	multisubunit Na H antiporter MnhE subunit
MUA31_RS10560	COG2212	antiporter activity
MUA31_RS10575	COG2050	protein possibly involved in aromatic compounds catabolism
MUA31_RS10580	COG2056	Na+-H+ antiporter family
MUA31_RS10585	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MUA31_RS10590	COG1252	NADH dehydrogenase
MUA31_RS10600	COG0316	Belongs to the HesB IscA family
MUA31_RS10605	COG4844	belongs to the
MUA31_RS10610	COG1252	NADH dehydrogenase
MUA31_RS10615	COG4837	Protein of unknown function (DUF1462)
MUA31_RS10620	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
MUA31_RS10625	COG0789	Transcriptional regulator
MUA31_RS10630	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
MUA31_RS10635	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUA31_RS10640	COG1696	Membrane protein involved in D-alanine export
MUA31_RS10645	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUA31_RS10655	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA31_RS10660	COG0647	UMP catabolic process
MUA31_RS10665	COG2445	Protein of unknown function DUF86
MUA31_RS10675	COG4470	Protein conserved in bacteria
MUA31_RS10680	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MUA31_RS10685	COG0737	Belongs to the 5'-nucleotidase family
MUA31_RS10690	COG0730	response to heat
MUA31_RS10695	COG1801	Protein of unknown function DUF72
MUA31_RS10705	COG1253	flavin adenine dinucleotide binding
MUA31_RS10755	COG0739	heme binding
MUA31_RS10810	COG4695	Portal protein
MUA31_RS10885	COG0629	single-stranded DNA binding
MUA31_RS11000	COG4974	Belongs to the 'phage' integrase family
MUA31_RS11010	COG0822	iron-sulfur transferase activity
MUA31_RS11020	COG0719	Fe-S assembly protein
MUA31_RS11025	COG0396	ATPase activity
MUA31_RS11030	COG1464	Belongs to the NlpA lipoprotein family
MUA31_RS11035	COG2011	ABC-type metal ion transport system permease component
MUA31_RS11040	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUA31_RS11045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA31_RS11050	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUA31_RS11055	COG0509	glycine decarboxylation via glycine cleavage system
MUA31_RS11060	COG1393	Belongs to the ArsC family
MUA31_RS11065	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA31_RS11075	COG0710	3-dehydroquinate dehydratase activity
MUA31_RS11095	COG1704	LemA family
MUA31_RS11100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUA31_RS11110	COG1278	Cold shock
MUA31_RS11115	COG0300	oxidoreductase activity
MUA31_RS11120	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUA31_RS11135	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
MUA31_RS11140	COG0557	exoribonuclease II activity
MUA31_RS11145	COG1647	Serine aminopeptidase, S33
MUA31_RS11150	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUA31_RS11160	COG0148	phosphopyruvate hydratase activity
MUA31_RS11165	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MUA31_RS11175	COG0126	phosphoglycerate kinase activity
MUA31_RS11205	COG0740	serine-type endopeptidase activity
MUA31_RS11315	COG1114	Component of the transport system for branched-chain amino acids
MUA31_RS11320	COG2814	Major facilitator Superfamily
MUA31_RS11325	COG1481	regulation of sporulation
MUA31_RS11330	COG0391	Required for morphogenesis under gluconeogenic growth conditions
MUA31_RS11335	COG1660	Displays ATPase and GTPase activities
MUA31_RS11350	COG0110	maltose O-acetyltransferase activity
MUA31_RS11355	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
MUA31_RS11360	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
MUA31_RS11365	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUA31_RS11390	COG3942	CHAP domain
MUA31_RS11405	COG0653	protein targeting
MUA31_RS11410	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MUA31_RS11415	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MUA31_RS11420	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
MUA31_RS11430	COG1739	Uncharacterized protein family UPF0029
MUA31_RS11435	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUA31_RS11440	COG2199	diguanylate cyclase activity
MUA31_RS11455	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUA31_RS11460	COG1929	Belongs to the glycerate kinase type-1 family
MUA31_RS11480	COG0812	UDP-N-acetylmuramate dehydrogenase activity
MUA31_RS11490	COG4607	ABC-type enterochelin transport system periplasmic component
MUA31_RS11495	COG4604	ABC transporter, ATP-binding protein
MUA31_RS11500	COG4605	iron ion homeostasis
MUA31_RS11505	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA31_RS11510	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUA31_RS11515	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUA31_RS11520	COG1780	Probably involved in ribonucleotide reductase function
MUA31_RS11530	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
MUA31_RS11535	COG3104	oligopeptide transport
MUA31_RS11540	COG3104	oligopeptide transport
MUA31_RS11545	COG2226	methyltransferase
MUA31_RS11555	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUA31_RS11565	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
MUA31_RS11570	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUA31_RS11575	COG1174	glycine betaine transport
MUA31_RS11585	COG0514	ATP-dependent DNA helicase (RecQ)
MUA31_RS11590	COG0488	(ABC) transporter
MUA31_RS11595	COG1368	sulfuric ester hydrolase activity
MUA31_RS11605	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUA31_RS11625	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
MUA31_RS11630	COG0720	synthase
MUA31_RS11650	COG0656	L-ascorbic acid biosynthetic process
MUA31_RS11660	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
MUA31_RS11685	COG1253	flavin adenine dinucleotide binding
MUA31_RS11690	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA31_RS11690	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA31_RS11690	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA31_RS11695	COG1105	Belongs to the carbohydrate kinase PfkB family
MUA31_RS11700	COG1349	DNA-binding transcription factor activity
MUA31_RS11705	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MUA31_RS11715	COG0039	L-malate dehydrogenase activity
MUA31_RS11720	COG1464	Belongs to the NlpA lipoprotein family
MUA31_RS11740	COG0471	metal ion transport
MUA31_RS11745	COG0039	L-malate dehydrogenase activity
MUA31_RS11755	COG4989	oxidoreductase activity
MUA31_RS11760	COG0523	cobalamin synthesis protein
MUA31_RS11770	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MUA31_RS11775	COG4988	ABC transporter
MUA31_RS11780	COG1968	undecaprenyl-diphosphatase activity
MUA31_RS11790	COG1671	Belongs to the UPF0178 family
MUA31_RS11830	COG0583	DNA-binding transcription factor activity
MUA31_RS11910	COG0217	transcriptional regulatory protein
MUA31_RS11925	COG2207	Transcriptional regulator
MUA31_RS11935	COG3942	CHAP domain
MUA31_RS11935	COG1388	LysM domain
MUA31_RS11945	COG0306	phosphate transporter
MUA31_RS11950	COG1392	Phosphate transport regulator
MUA31_RS11955	COG0577	efflux transmembrane transporter activity
MUA31_RS11960	COG1136	(ABC) transporter
MUA31_RS11965	COG2205	protein histidine kinase activity
MUA31_RS11985	COG3949	Membrane
MUA31_RS11995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA31_RS12000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA31_RS12005	COG1120	ATPase activity
MUA31_RS12010	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUA31_RS12015	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUA31_RS12020	COG1132	(ABC) transporter
MUA31_RS12025	COG1686	Belongs to the peptidase S11 family
MUA31_RS12030	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MUA31_RS12035	COG1216	Glycosyl transferase, family 2
MUA31_RS12040	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA31_RS12045	COG1682	transport, permease protein
MUA31_RS12050	COG1134	teichoic acid transport
MUA31_RS12055	COG5609	conserved protein (DUF2294)
MUA31_RS12060	COG3949	Membrane
MUA31_RS12070	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUA31_RS12085	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
MUA31_RS12100	COG1247	-acetyltransferase
MUA31_RS12105	COG0671	phosphoesterase, PA-phosphatase related
MUA31_RS12115	COG1121	(ABC) transporter
MUA31_RS12120	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUA31_RS12125	COG0803	Belongs to the bacterial solute-binding protein 9 family
MUA31_RS12135	COG2348	transferase activity, transferring amino-acyl groups
MUA31_RS12140	COG0025	NhaP-type Na H and K H
MUA31_RS12185	COG0546	phosphoglycolate phosphatase activity
MUA31_RS12190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA31_RS12195	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUA31_RS12200	COG0018	arginyl-trna synthetase
MUA31_RS12210	COG1473	amidohydrolase
MUA31_RS12220	COG1078	dGTPase activity
MUA31_RS12225	COG0519	Catalyzes the synthesis of GMP from XMP
MUA31_RS12235	COG4844	belongs to the
MUA31_RS12255	COG0095	Lipoate-protein ligase
MUA31_RS12265	COG3253	May function as heme-dependent peroxidase
MUA31_RS12285	COG0586	Pfam SNARE associated Golgi protein
MUA31_RS12295	COG0531	amino acid
MUA31_RS12300	COG2363	Small membrane protein
MUA31_RS12310	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
MUA31_RS12325	COG1469	GTP cyclohydrolase I activity
MUA31_RS12330	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUA31_RS12335	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUA31_RS12340	COG0363	glucosamine-6-phosphate deaminase activity
MUA31_RS12345	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
MUA31_RS12355	COG0431	NADPH-dependent FMN reductase
MUA31_RS12360	COG0561	phosphatase activity
MUA31_RS12370	COG1428	Deoxynucleoside kinase
MUA31_RS12375	COG1428	Deoxynucleoside kinase
MUA31_RS12380	COG0561	phosphatase activity
MUA31_RS12390	COG0546	phosphoglycolate phosphatase activity
MUA31_RS12395	COG2832	Protein of unknown function (DUF454)
MUA31_RS12405	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUA31_RS12430	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
MUA31_RS12435	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
MUA31_RS12455	COG1473	amidohydrolase
MUA31_RS12460	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MUA31_RS12465	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MUA31_RS12470	COG0049	tRNA binding
MUA31_RS12475	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MUA31_RS12485	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MUA31_RS12490	COG0085	RNA polymerase activity
MUA31_RS12495	COG2813	Specifically methylates the guanine in position
MUA31_RS12500	COG0222	ribosome binding
MUA31_RS12505	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MUA31_RS12510	COG0081	regulation of translation
MUA31_RS12515	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MUA31_RS12520	COG0250	Participates in transcription elongation, termination and antitermination
MUA31_RS12530	COG0267	Belongs to the bacterial ribosomal protein bL33 family
MUA31_RS12545	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUA31_RS12550	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
MUA31_RS12555	COG0215	cysteine-tRNA ligase activity
MUA31_RS12560	COG1045	serine acetyltransferase
MUA31_RS12570	COG4956	integral membrane protein (PIN domain superfamily)
MUA31_RS12575	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MUA31_RS12580	COG0542	response to heat
MUA31_RS12585	COG3869	Catalyzes the specific phosphorylation of arginine residues in
MUA31_RS12600	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUA31_RS12615	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
MUA31_RS12620	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
MUA31_RS12625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUA31_RS12635	COG2814	Major facilitator Superfamily
MUA31_RS12700	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
MUA31_RS12705	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MUA31_RS12710	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MUA31_RS12730	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
MUA31_RS12735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MUA31_RS12750	COG1098	S1 RNA binding domain
MUA31_RS12760	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MUA31_RS12765	COG3956	TIGRFAM MazG family protein
MUA31_RS12770	COG2244	polysaccharide biosynthetic process
MUA31_RS12775	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MUA31_RS12780	COG0193	aminoacyl-tRNA hydrolase activity
MUA31_RS12785	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
MUA31_RS12790	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MUA31_RS12795	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
MUA31_RS12800	COG2088	sporulation resulting in formation of a cellular spore
MUA31_RS12805	COG0251	oxidation-reduction process
MUA31_RS12810	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA31_RS12825	COG4466	Protein conserved in bacteria
MUA31_RS12830	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MUA31_RS12835	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUA31_RS12840	COG0084	hydrolase, TatD family'
MUA31_RS12845	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA31_RS12845	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA31_RS12890	COG3942	CHAP domain
MUA31_RS12925	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MUA31_RS12930	COG2827	Endonuclease containing a URI domain
MUA31_RS12935	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
MUA31_RS12945	COG1774	PSP1 C-terminal conserved region
MUA31_RS12950	COG0470	DNA polymerase III
MUA31_RS12955	COG3870	Protein conserved in bacteria
MUA31_RS12960	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MUA31_RS12965	COG1982	Orn Lys Arg decarboxylase major
MUA31_RS12985	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MUA31_RS12995	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MUA31_RS13025	COG2814	Major facilitator Superfamily
MUA31_RS13030	COG0583	DNA-binding transcription factor activity
MUA31_RS13040	COG2188	Transcriptional regulator
MUA31_RS13045	COG0366	Alpha amylase catalytic
MUA31_RS13050	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA31_RS13050	COG1263	PTS System
MUA31_RS13055	COG0346	lactoylglutathione lyase activity
MUA31_RS13065	COG0493	'glutamate synthase
MUA31_RS13070	COG0067	glutamate synthase
MUA31_RS13070	COG0069	glutamate synthase activity
MUA31_RS13070	COG0070	glutamate synthase
MUA31_RS13075	COG0583	DNA-binding transcription factor activity
MUA31_RS13100	COG4841	protein insertion into membrane
MUA31_RS13110	COG0737	Belongs to the 5'-nucleotidase family
MUA31_RS13115	COG2162	N-hydroxyarylamine O-acetyltransferase activity
MUA31_RS13125	COG0626	cystathionine gamma-synthase activity
MUA31_RS13130	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUA31_RS13135	COG1266	CAAX protease self-immunity
MUA31_RS13140	COG0733	neurotransmitter:sodium symporter activity
MUA31_RS13145	COG1309	transcriptional regulator
MUA31_RS13155	COG1647	Serine aminopeptidase, S33
MUA31_RS13160	COG1755	Isoprenylcysteine carboxyl methyltransferase
MUA31_RS13165	COG1279	arginine transmembrane transporter activity
MUA31_RS13175	COG0346	lactoylglutathione lyase activity
MUA31_RS13195	COG1695	Transcriptional regulator
MUA31_RS13200	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MUA31_RS13205	COG1683	Conserved Protein
MUA31_RS13230	COG0529	Catalyzes the synthesis of activated sulfate
MUA31_RS13235	COG2046	Belongs to the sulfate adenylyltransferase family
MUA31_RS13240	COG0730	response to heat
MUA31_RS13250	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUA31_RS13255	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MUA31_RS13260	COG0175	sulfate reduction
MUA31_RS13275	COG1216	Glycosyl transferase, family 2
MUA31_RS13285	COG1051	belongs to the nudix hydrolase family
MUA31_RS13300	COG2514	catechol 2,3-dioxygenase activity
MUA31_RS13305	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MUA31_RS13305	COG0519	Catalyzes the synthesis of GMP from XMP
MUA31_RS13315	COG2233	PERMEase
MUA31_RS13320	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA31_RS13340	COG1823	symporter activity
MUA31_RS13345	COG0778	Nitroreductase
MUA31_RS13355	COG0450	alkyl hydroperoxide reductase
MUA31_RS13360	COG3634	alkyl hydroperoxide reductase activity
MUA31_RS13380	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MUA31_RS13385	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA31_RS13400	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MUA31_RS13410	COG0360	Binds together with S18 to 16S ribosomal RNA
MUA31_RS13430	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA31_RS13450	COG0012	GTP binding
MUA31_RS13455	COG4481	Protein conserved in bacteria
MUA31_RS13460	COG0668	transmembrane transport
MUA31_RS13465	COG1475	DNA binding
MUA31_RS13470	COG0626	cystathionine gamma-synthase activity
MUA31_RS13475	COG0646	methionine synthase
MUA31_RS13475	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MUA31_RS13480	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MUA31_RS13490	COG0436	Aminotransferase
MUA31_RS13505	COG1475	DNA binding
MUA31_RS13510	COG0357	Ribosomal RNA small subunit methyltransferase G
MUA31_RS13520	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
MUA31_RS13525	COG0594	ribonuclease P activity
MUA31_RS13630	COG1114	Component of the transport system for branched-chain amino acids
MUA31_RS13650	COG0577	efflux transmembrane transporter activity