locus-tag	class	description
MUA90_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
MUA90_RS00010	COG0592	DNA-directed DNA polymerase activity
MUA90_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MUA90_RS00025	COG0187	DNA topoisomerase II activity
MUA90_RS00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUA90_RS00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MUA90_RS00040	COG2986	histidine ammonia-lyase
MUA90_RS00045	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
MUA90_RS00065	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
MUA90_RS00070	COG0359	binds to the 23S rRNA
MUA90_RS00075	COG0305	Participates in initiation and elongation during chromosome replication
MUA90_RS00085	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUA90_RS00100	COG0745	RESPONSE REGULATOR receiver
MUA90_RS00105	COG5002	protein histidine kinase activity
MUA90_RS00110	COG4863	YycH protein
MUA90_RS00120	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
MUA90_RS00130	COG2801	Transposase and inactivated derivatives
MUA90_RS00135	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
MUA90_RS00170	COG0640	Transcriptional regulator
MUA90_RS00195	COG0076	glutamate decarboxylase activity
MUA90_RS00220	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MUA90_RS00230	COG1280	lysine exporter protein (LysE YggA)
MUA90_RS00240	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA90_RS00265	COG1028	Short-chain dehydrogenase reductase Sdr
MUA90_RS00285	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUA90_RS00285	COG3942	CHAP domain
MUA90_RS00305	COG0583	DNA-binding transcription factor activity
MUA90_RS00310	COG1028	Short-chain dehydrogenase reductase Sdr
MUA90_RS00320	COG3477	response to acidic pH
MUA90_RS00325	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA90_RS00325	COG3711	transcriptional antiterminator
MUA90_RS00335	COG1482	cell wall glycoprotein biosynthetic process
MUA90_RS00345	COG0402	S-adenosylhomocysteine deaminase activity
MUA90_RS00350	COG0402	S-adenosylhomocysteine deaminase activity
MUA90_RS00355	COG1686	Belongs to the peptidase S11 family
MUA90_RS00370	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUA90_RS00375	COG1609	Transcriptional regulator
MUA90_RS00385	COG1869	D-ribose catabolic process
MUA90_RS00435	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
MUA90_RS00450	COG3842	ATPase activity
MUA90_RS00455	COG0395	ABC-type sugar transport system, permease component
MUA90_RS00465	COG1653	transport
MUA90_RS00475	COG0363	glucosamine-6-phosphate deaminase activity
MUA90_RS00480	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
MUA90_RS00495	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUA90_RS00500	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA90_RS00505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA90_RS00525	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS00550	COG2851	Citrate transporter
MUA90_RS00570	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUA90_RS00575	COG3246	L-lysine catabolic process to acetate
MUA90_RS00585	COG0730	response to heat
MUA90_RS00595	COG1309	transcriptional regulator
MUA90_RS00600	COG1063	alcohol dehydrogenase
MUA90_RS00605	COG0730	response to heat
MUA90_RS00620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUA90_RS00625	COG1309	transcriptional regulator
MUA90_RS00645	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS00665	COG0753	catalase activity
MUA90_RS00670	COG0662	Cupin 2, conserved barrel domain protein
MUA90_RS00700	COG1064	alcohol dehydrogenase
MUA90_RS00705	COG3976	FMN-binding domain protein
MUA90_RS00705	COG1053	succinate dehydrogenase
MUA90_RS00705	COG0431	NADPH-dependent FMN reductase
MUA90_RS00745	COG2801	Transposase and inactivated derivatives
MUA90_RS00785	COG3181	Tripartite tricarboxylate transporter family receptor
MUA90_RS00800	COG1966	Carbon starvation protein
MUA90_RS00805	COG0004	ammonium transporteR
MUA90_RS00810	COG0156	8-amino-7-oxononanoate synthase activity
MUA90_RS00820	COG1054	Belongs to the UPF0176 family
MUA90_RS00825	COG2388	GCN5-related N-acetyl-transferase
MUA90_RS00845	COG0659	secondary active sulfate transmembrane transporter activity
MUA90_RS00850	COG0346	lactoylglutathione lyase activity
MUA90_RS00860	COG0789	Transcriptional regulator
MUA90_RS00865	COG1664	Polymer-forming cytoskeletal
MUA90_RS00875	COG0006	proline dipeptidase activity
MUA90_RS00885	COG0477	Major facilitator Superfamily
MUA90_RS00900	COG0667	Aldo Keto reductase
MUA90_RS00910	COG1028	Short-chain dehydrogenase reductase Sdr
MUA90_RS00920	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUA90_RS00920	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUA90_RS00945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA90_RS00950	COG1028	Short-chain dehydrogenase reductase Sdr
MUA90_RS00960	COG1288	antiporter activity
MUA90_RS00975	COG3871	stress protein (general stress protein 26)
MUA90_RS00980	COG1929	Belongs to the glycerate kinase type-1 family
MUA90_RS00985	COG1511	domain protein
MUA90_RS01010	COG0579	oxidoreductase
MUA90_RS01015	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
MUA90_RS01030	COG0737	Belongs to the 5'-nucleotidase family
MUA90_RS01045	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
MUA90_RS01050	COG3639	organic phosphonate transmembrane transporter activity
MUA90_RS01075	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA90_RS01080	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUA90_RS01085	COG1757	Na H antiporter
MUA90_RS01095	COG4195	phage-related replication protein
MUA90_RS01100	COG4195	phage-related replication protein
MUA90_RS01130	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUA90_RS01150	COG2207	Transcriptional regulator
MUA90_RS01150	COG1609	Transcriptional regulator
MUA90_RS01225	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA90_RS01230	COG0022	dehydrogenase e1 component
MUA90_RS01235	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA90_RS01240	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA90_RS01275	COG1288	antiporter activity
MUA90_RS01280	COG0549	Belongs to the carbamate kinase family
MUA90_RS01285	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA90_RS01300	COG0706	membrane insertase activity
MUA90_RS01315	COG0583	DNA-binding transcription factor activity
MUA90_RS01320	COG3842	ATPase activity
MUA90_RS01325	COG1840	ABC-type Fe3 transport system, periplasmic component
MUA90_RS01330	COG1177	transmembrane transport
MUA90_RS01340	COG3177	Filamentation induced by cAMP protein fic
MUA90_RS01355	COG0745	RESPONSE REGULATOR receiver
MUA90_RS01360	COG2205	protein histidine kinase activity
MUA90_RS01375	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
MUA90_RS01395	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MUA90_RS01405	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
MUA90_RS01410	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUA90_RS01455	COG4221	oxidoreductase activity
MUA90_RS01460	COG0069	glutamate synthase activity
MUA90_RS01465	COG2814	Major facilitator Superfamily
MUA90_RS01470	COG4336	lyase activity
MUA90_RS01490	COG0531	amino acid
MUA90_RS01495	COG0753	catalase activity
MUA90_RS01500	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
MUA90_RS01510	COG2814	Major facilitator Superfamily
MUA90_RS01535	COG3583	domain protein
MUA90_RS01535	COG4932	domain protein
MUA90_RS01535	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
MUA90_RS01550	COG2011	ABC-type metal ion transport system permease component
MUA90_RS01555	COG1464	Belongs to the NlpA lipoprotein family
MUA90_RS01610	COG2210	Belongs to the sulfur carrier protein TusA family
MUA90_RS01620	COG3961	Belongs to the TPP enzyme family
MUA90_RS01625	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA90_RS01630	COG1510	regulation of RNA biosynthetic process
MUA90_RS01635	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS01640	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
MUA90_RS01645	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
MUA90_RS01645	COG3583	domain protein
MUA90_RS01645	COG4932	domain protein
MUA90_RS01700	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUA90_RS01705	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUA90_RS01750	COG2409	Drug exporters of the RND superfamily
MUA90_RS01755	COG0438	transferase activity, transferring glycosyl groups
MUA90_RS01760	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA90_RS01760	COG0463	Glycosyl transferase, family 2
MUA90_RS01770	COG0494	nUDIX hydrolase
MUA90_RS01780	COG3588	fructose-bisphosphate aldolase
MUA90_RS01785	COG2258	MOSC domain
MUA90_RS01805	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS01805	COG1454	alcohol dehydrogenase
MUA90_RS01815	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
MUA90_RS01820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA90_RS01820	COG1263	PTS System
MUA90_RS01825	COG1737	Transcriptional regulator
MUA90_RS01870	COG0582	viral genome integration into host DNA
MUA90_RS01875	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA90_RS01875	COG2111	Na H antiporter
MUA90_RS01880	COG2111	Na H antiporter
MUA90_RS01885	COG1006	Multisubunit Na H antiporter MnhC subunit
MUA90_RS01895	COG1863	multisubunit Na H antiporter MnhE subunit
MUA90_RS01900	COG2212	antiporter activity
MUA90_RS01920	COG1113	amino acid transport
MUA90_RS01930	COG1131	(ABC) transporter
MUA90_RS01940	COG2824	Alkylphosphonate utilization operon protein PhnA
MUA90_RS01950	COG2376	Dihydroxyacetone kinase
MUA90_RS01955	COG1461	Dihydroxyacetone kinase
MUA90_RS01960	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
MUA90_RS01965	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MUA90_RS01975	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA90_RS01985	COG0531	amino acid
MUA90_RS02000	COG0463	Glycosyl transferase, family 2
MUA90_RS02020	COG1668	transmembrane transport
MUA90_RS02060	COG0318	PFAM AMP-dependent synthetase and ligase
MUA90_RS02065	COG0183	Belongs to the thiolase family
MUA90_RS02075	COG2235	arginine
MUA90_RS02085	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUA90_RS02090	COG1438	arginine binding
MUA90_RS02100	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUA90_RS02105	COG2022	thiamine diphosphate biosynthetic process
MUA90_RS02115	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUA90_RS02120	COG0352	thiamine-phosphate diphosphorylase activity
MUA90_RS02130	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
MUA90_RS02135	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
MUA90_RS02155	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUA90_RS02170	COG2140	Oxalate decarboxylase
MUA90_RS02175	COG0405	Gamma-glutamyltransferase
MUA90_RS02180	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUA90_RS02190	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA90_RS02195	COG2508	Transcriptional regulator
MUA90_RS02205	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUA90_RS02220	COG3257	ureidoglycine aminohydrolase activity
MUA90_RS02230	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
MUA90_RS02235	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUA90_RS02240	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUA90_RS02255	COG2807	transmembrane transport
MUA90_RS02260	COG5646	InterPro IPR014922
MUA90_RS02270	COG2814	Major facilitator Superfamily
MUA90_RS02305	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUA90_RS02310	COG1984	allophanate hydrolase subunit 2
MUA90_RS02315	COG0511	ligase activity, forming carbon-carbon bonds
MUA90_RS02320	COG0439	Biotin carboxylase
MUA90_RS02325	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
MUA90_RS02330	COG1914	H( )-stimulated, divalent metal cation uptake system
MUA90_RS02335	COG1070	Carbohydrate kinase
MUA90_RS02350	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
MUA90_RS02405	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUA90_RS02420	COG3189	MarR family transcriptional regulator
MUA90_RS02425	COG1882	Formate acetyltransferase
MUA90_RS02430	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
MUA90_RS02445	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
MUA90_RS02450	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
MUA90_RS02460	COG3001	Fructosamine kinase
MUA90_RS02475	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
MUA90_RS02490	COG3764	Sortase (surface protein transpeptidase)
MUA90_RS02495	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
MUA90_RS02510	COG2801	Transposase and inactivated derivatives
MUA90_RS02525	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MUA90_RS02545	COG1136	(ABC) transporter
MUA90_RS02550	COG0577	efflux transmembrane transporter activity
MUA90_RS02555	COG0583	DNA-binding transcription factor activity
MUA90_RS02560	COG1380	Effector of murein hydrolase LrgA
MUA90_RS02570	COG0028	Belongs to the TPP enzyme family
MUA90_RS02585	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MUA90_RS02590	COG1687	branched-chain amino acid
MUA90_RS02595	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
MUA90_RS02620	COG1760	l-serine dehydratase
MUA90_RS02625	COG1760	l-serine dehydratase
MUA90_RS02635	COG2249	NAD(P)H dehydrogenase (quinone) activity
MUA90_RS02640	COG0778	Nitroreductase
MUA90_RS02650	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA90_RS02655	COG1132	(ABC) transporter
MUA90_RS02660	COG1132	(ABC) transporter
MUA90_RS02675	COG0346	lactoylglutathione lyase activity
MUA90_RS02680	COG2217	Heavy metal translocating P-type atpase
MUA90_RS02685	COG2211	Major facilitator Superfamily
MUA90_RS02690	COG2207	Transcriptional regulator
MUA90_RS02695	COG3250	beta-galactosidase activity
MUA90_RS02700	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
MUA90_RS02705	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
MUA90_RS02725	COG0586	Pfam SNARE associated Golgi protein
MUA90_RS02730	COG2271	Major facilitator Superfamily
MUA90_RS02740	COG3527	Alpha-acetolactate decarboxylase
MUA90_RS02745	COG1289	transmembrane transporter activity
MUA90_RS02750	COG4876	unkown
MUA90_RS02755	COG0523	cobalamin synthesis protein
MUA90_RS02760	COG2357	RelA SpoT domain protein
MUA90_RS02770	COG2808	Putative FMN-binding domain
MUA90_RS02775	COG1802	Transcriptional regulator
MUA90_RS02785	COG2610	gluconate transmembrane transporter activity
MUA90_RS02800	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
MUA90_RS02805	COG0248	Ppx GppA phosphatase
MUA90_RS02815	COG2801	Transposase and inactivated derivatives
MUA90_RS02830	COG4619	ABC transporter
MUA90_RS02835	COG0390	transport system, permease component
MUA90_RS02840	COG2814	Major facilitator Superfamily
MUA90_RS02845	COG2272	Belongs to the type-B carboxylesterase lipase family
MUA90_RS02850	COG0531	amino acid
MUA90_RS02855	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
MUA90_RS02865	COG1174	glycine betaine transport
MUA90_RS02875	COG1174	glycine betaine transport
MUA90_RS02885	COG1309	transcriptional regulator
MUA90_RS02900	COG1346	cytolysis
MUA90_RS02905	COG1380	Effector of murein hydrolase LrgA
MUA90_RS02910	COG3279	Response regulator of the LytR AlgR family
MUA90_RS02915	COG3275	phosphorelay sensor kinase activity
MUA90_RS02950	COG2814	Major facilitator Superfamily
MUA90_RS02960	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MUA90_RS02965	COG1388	LysM domain
MUA90_RS02970	COG0588	phosphoglycerate mutase activity
MUA90_RS02980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUA90_RS02985	COG0765	amino acid transport
MUA90_RS02990	COG1126	abc transporter atp-binding protein
MUA90_RS03010	COG0523	cobalamin synthesis protein
MUA90_RS03030	COG2116	formate transmembrane transporter activity
MUA90_RS03045	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUA90_RS03055	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MUA90_RS03055	COG1648	precorrin-2 dehydrogenase activity
MUA90_RS03060	COG1733	regulation of RNA biosynthetic process
MUA90_RS03065	COG2814	Major facilitator Superfamily
MUA90_RS03070	COG0656	L-ascorbic acid biosynthetic process
MUA90_RS03075	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
MUA90_RS03080	COG1140	nitrate reductase beta subunit
MUA90_RS03090	COG2181	nitrate reductase activity
MUA90_RS03100	COG4585	Histidine kinase
MUA90_RS03110	COG2223	nitrite transmembrane transporter activity
MUA90_RS03115	COG0772	Belongs to the SEDS family
MUA90_RS03120	COG3425	synthase
MUA90_RS03125	COG0183	Belongs to the thiolase family
MUA90_RS03135	COG0071	Belongs to the small heat shock protein (HSP20) family
MUA90_RS03140	COG1846	Transcriptional regulator
MUA90_RS03145	COG0778	Nitroreductase
MUA90_RS03155	COG0697	spore germination
MUA90_RS03170	COG1611	Belongs to the LOG family
MUA90_RS03190	COG0492	ferredoxin-NADP+ reductase activity
MUA90_RS03195	COG2814	Major facilitator Superfamily
MUA90_RS03210	COG0463	Glycosyl transferase, family 2
MUA90_RS03210	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA90_RS03215	COG1620	l-lactate permease
MUA90_RS03220	COG0438	transferase activity, transferring glycosyl groups
MUA90_RS03230	COG5002	protein histidine kinase activity
MUA90_RS03230	COG3850	Histidine kinase
MUA90_RS03235	COG0745	RESPONSE REGULATOR receiver
MUA90_RS03240	COG0577	efflux transmembrane transporter activity
MUA90_RS03245	COG1136	(ABC) transporter
MUA90_RS03265	COG2814	Major facilitator Superfamily
MUA90_RS03285	COG0598	Magnesium transport protein CorA
MUA90_RS03290	COG1304	FMN binding
MUA90_RS03300	COG1328	CTP reductase activity
MUA90_RS03310	COG2094	Belongs to the DNA glycosylase MPG family
MUA90_RS03315	COG3152	Membrane
MUA90_RS03335	COG4152	abc transporter atp-binding protein
MUA90_RS03340	COG1668	transmembrane transport
MUA90_RS03345	COG1742	UPF0060 membrane protein
MUA90_RS03350	COG2017	converts alpha-aldose to the beta-anomer
MUA90_RS03360	COG2801	Transposase and inactivated derivatives
MUA90_RS03375	COG1266	CAAX protease self-immunity
MUA90_RS03380	COG0010	Belongs to the arginase family
MUA90_RS03385	COG0583	DNA-binding transcription factor activity
MUA90_RS03390	COG3314	Sporulation integral membrane protein YlbJ
MUA90_RS03400	COG1228	amidohydrolase
MUA90_RS03405	COG0659	secondary active sulfate transmembrane transporter activity
MUA90_RS03415	COG1028	Short-chain dehydrogenase reductase Sdr
MUA90_RS03420	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUA90_RS03435	COG2271	Major facilitator Superfamily
MUA90_RS03445	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUA90_RS03470	COG1113	amino acid transport
MUA90_RS03475	COG1737	Transcriptional regulator
MUA90_RS03500	COG1316	TRANSCRIPTIONal
MUA90_RS03510	COG3383	formate dehydrogenase (NAD+) activity
MUA90_RS03535	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA90_RS03540	COG2076	Multidrug Resistance protein
MUA90_RS03545	COG2076	Multidrug Resistance protein
MUA90_RS03560	COG1757	Na H antiporter
MUA90_RS03570	COG3942	CHAP domain
MUA90_RS03585	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUA90_RS03585	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUA90_RS03610	COG0829	nickel cation binding
MUA90_RS03630	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUA90_RS03635	COG1960	acyl-CoA dehydrogenase activity
MUA90_RS03640	COG1957	nucleoside hydrolase
MUA90_RS03645	COG1268	BioY protein
MUA90_RS03655	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MUA90_RS03660	COG1609	Transcriptional regulator
MUA90_RS03665	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MUA90_RS03670	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MUA90_RS03675	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
MUA90_RS03695	COG4149	molybdate abc transporter
MUA90_RS03700	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
MUA90_RS03705	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUA90_RS03710	COG0521	Mo-molybdopterin cofactor biosynthetic process
MUA90_RS03715	COG0315	cyclic pyranopterin monophosphate synthase activity
MUA90_RS03720	COG0303	'Molybdopterin
MUA90_RS03730	COG0314	molybdopterin synthase activity
MUA90_RS03740	COG0746	molybdenum cofactor guanylyltransferase activity
MUA90_RS03745	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
MUA90_RS03760	COG1131	(ABC) transporter
MUA90_RS03775	COG1028	Short-chain dehydrogenase reductase Sdr
MUA90_RS03780	COG2814	Major facilitator Superfamily
MUA90_RS03800	COG2348	transferase activity, transferring amino-acyl groups
MUA90_RS03805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MUA90_RS03835	COG4975	Glucose uptake
MUA90_RS03850	COG2252	PERMEase
MUA90_RS03860	COG4975	Glucose uptake
MUA90_RS03865	COG0431	NADPH-dependent FMN reductase
MUA90_RS03875	COG0051	transcription antitermination factor activity, RNA binding
MUA90_RS03880	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MUA90_RS03885	COG0088	Forms part of the polypeptide exit tunnel
MUA90_RS03890	COG0089	rRNA binding
MUA90_RS03895	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
MUA90_RS03900	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
MUA90_RS03905	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MUA90_RS03910	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
MUA90_RS03915	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MUA90_RS03925	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MUA90_RS03930	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
MUA90_RS03935	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
MUA90_RS03940	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
MUA90_RS03945	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUA90_RS03950	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MUA90_RS03955	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
MUA90_RS03960	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
MUA90_RS03965	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
MUA90_RS03970	COG1841	ribosomal large subunit assembly
MUA90_RS03975	COG0200	Binds to the 23S rRNA
MUA90_RS03980	COG0201	protein transport
MUA90_RS03985	COG0563	adenylate kinase activity
MUA90_RS03995	COG0257	Belongs to the bacterial ribosomal protein bL36 family
MUA90_RS04000	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
MUA90_RS04005	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
MUA90_RS04010	COG0202	RNA polymerase activity
MUA90_RS04015	COG0203	ribosomal protein L17
MUA90_RS04025	COG1122	ATPase activity
MUA90_RS04035	COG0101	tRNA pseudouridine synthase activity
MUA90_RS04040	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MUA90_RS04045	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MUA90_RS04055	COG1442	glycosyl transferase family 8
MUA90_RS04080	COG2213	PTS system mannitol-specific
MUA90_RS04080	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA90_RS04085	COG2318	DinB family
MUA90_RS04090	COG2217	Heavy metal translocating P-type atpase
MUA90_RS04100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUA90_RS04105	COG0574	Belongs to the PEP-utilizing enzyme family
MUA90_RS04105	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUA90_RS04110	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
MUA90_RS04115	COG2130	NADP-dependent
MUA90_RS04125	COG0604	alcohol dehydrogenase
MUA90_RS04130	COG0604	alcohol dehydrogenase
MUA90_RS04135	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA90_RS04150	COG1302	Protein conserved in bacteria
MUA90_RS04160	COG2814	Major facilitator Superfamily
MUA90_RS04165	COG4264	IucA IucC family
MUA90_RS04170	COG3457	Alanine racemase
MUA90_RS04175	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MUA90_RS04180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA90_RS04185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA90_RS04190	COG3314	Sporulation integral membrane protein YlbJ
MUA90_RS04195	COG2329	Antibiotic biosynthesis monooxygenase
MUA90_RS04210	COG2801	Transposase and inactivated derivatives
MUA90_RS04220	COG1988	membrane-bound metal-dependent
MUA90_RS04225	COG4284	Utp--glucose-1-phosphate uridylyltransferase
MUA90_RS04230	COG1272	protein, Hemolysin III
MUA90_RS04245	COG2814	Major facilitator Superfamily
MUA90_RS04250	COG0489	protein tyrosine kinase activity
MUA90_RS04300	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MUA90_RS04305	COG4856	YbbR-like protein
MUA90_RS04310	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUA90_RS04315	COG1285	pathogenesis
MUA90_RS04320	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MUA90_RS04345	COG0640	Transcriptional regulator
MUA90_RS04350	COG0702	epimerase
MUA90_RS04355	COG2186	Transcriptional regulator
MUA90_RS04360	COG0247	lactate metabolic process
MUA90_RS04365	COG1139	Iron-sulfur cluster binding protein
MUA90_RS04370	COG1556	Lactate utilization protein
MUA90_RS04375	COG1482	cell wall glycoprotein biosynthetic process
MUA90_RS04395	COG0783	Belongs to the Dps family
MUA90_RS04405	COG1876	peptidase activity
MUA90_RS04410	COG0813	purine-nucleoside phosphorylase activity
MUA90_RS04415	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
MUA90_RS04430	COG1854	S-ribosylhomocysteine lyase activity
MUA90_RS04450	COG5146	pantothenate kinase activity
MUA90_RS04460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUA90_RS04465	COG3343	RNA polymerase activity
MUA90_RS04470	COG0504	CTP synthase activity
MUA90_RS04480	COG0191	fructose-bisphosphate aldolase activity
MUA90_RS04485	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUA90_RS04490	COG1733	regulation of RNA biosynthetic process
MUA90_RS04495	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS04500	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
MUA90_RS04505	COG0254	rRNA binding
MUA90_RS04515	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MUA90_RS04520	COG2890	protein-(glutamine-N5) methyltransferase activity
MUA90_RS04525	COG0009	L-threonylcarbamoyladenylate synthase
MUA90_RS04530	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUA90_RS04535	COG4475	Protein of unknown function (DUF436)
MUA90_RS04540	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MUA90_RS04545	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
MUA90_RS04550	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MUA90_RS04560	COG0356	it plays a direct role in the translocation of protons across the membrane
MUA90_RS04565	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUA90_RS04570	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
MUA90_RS04575	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUA90_RS04585	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
MUA90_RS04590	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MUA90_RS04595	COG0355	proton-transporting ATP synthase activity, rotational mechanism
MUA90_RS04605	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUA90_RS04615	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
MUA90_RS04630	COG1388	LysM domain
MUA90_RS04655	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MUA90_RS04665	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
MUA90_RS04670	COG0352	thiamine-phosphate diphosphorylase activity
MUA90_RS04675	COG0706	membrane insertase activity
MUA90_RS04680	COG0456	acetyltransferase
MUA90_RS04690	COG1418	mRNA catabolic process
MUA90_RS04695	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUA90_RS04700	COG1937	Protein conserved in bacteria
MUA90_RS04715	COG2217	Heavy metal translocating P-type atpase
MUA90_RS04725	COG0772	Belongs to the SEDS family
MUA90_RS04730	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUA90_RS04735	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MUA90_RS04740	COG0513	Belongs to the DEAD box helicase family
MUA90_RS04755	COG3402	PFAM membrane-flanked domain
MUA90_RS04760	COG0736	holo-[acyl-carrier-protein] synthase activity
MUA90_RS04765	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MUA90_RS04780	COG2208	phosphoserine phosphatase activity
MUA90_RS04795	COG1191	sigma factor activity
MUA90_RS04800	COG2183	response to ionizing radiation
MUA90_RS04805	COG3091	SprT-like family
MUA90_RS04840	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
MUA90_RS04845	COG0473	3-isopropylmalate dehydrogenase activity
MUA90_RS04850	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MUA90_RS04855	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
MUA90_RS04865	COG0028	Belongs to the TPP enzyme family
MUA90_RS04870	COG0129	dihydroxy-acid dehydratase activity
MUA90_RS04875	COG0802	atpase or kinase
MUA90_RS04880	COG1214	PFAM Peptidase M22, glycoprotease
MUA90_RS04885	COG0456	acetyltransferase
MUA90_RS04890	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MUA90_RS04895	COG0488	(ABC) transporter
MUA90_RS04900	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
MUA90_RS04905	COG0425	Belongs to the sulfur carrier protein TusA family
MUA90_RS04910	COG2391	methyltransferase activity
MUA90_RS04915	COG1621	beta-fructofuranosidase activity
MUA90_RS04935	COG4512	PFAM Accessory gene regulator B
MUA90_RS04955	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MUA90_RS04960	COG0459	protein refolding
MUA90_RS04965	COG1104	cysteine desulfurase activity
MUA90_RS04990	COG1725	Transcriptional regulator
MUA90_RS05005	COG1131	(ABC) transporter
MUA90_RS05050	COG2706	6-phosphogluconolactonase activity
MUA90_RS05055	COG0471	metal ion transport
MUA90_RS05065	COG1335	isochorismatase
MUA90_RS05070	COG1227	inorganic diphosphatase activity
MUA90_RS05075	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS05080	COG0077	Prephenate dehydratase
MUA90_RS05090	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MUA90_RS05095	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
MUA90_RS05100	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
MUA90_RS05110	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MUA90_RS05115	COG4496	protein, YerC YecD
MUA90_RS05120	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
MUA90_RS05130	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MUA90_RS05135	COG4851	CamS sex pheromone cAM373 precursor
MUA90_RS05140	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA90_RS05145	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUA90_RS05150	COG0154	amidase activity
MUA90_RS05155	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUA90_RS05165	COG1597	lipid kinase activity
MUA90_RS05170	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MUA90_RS05185	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUA90_RS05205	COG2801	Transposase and inactivated derivatives
MUA90_RS05215	COG4129	membrane
MUA90_RS05220	COG0024	Methionine aminopeptidase
MUA90_RS05240	COG2197	response regulator
MUA90_RS05245	COG0288	reversible hydration of carbon dioxide
MUA90_RS05250	COG1295	ribonuclease BN
MUA90_RS05265	COG4840	Belongs to the UPF0435 family
MUA90_RS05270	COG2309	aminopeptidase activity
MUA90_RS05275	COG1607	acyl-coa hydrolase
MUA90_RS05280	COG0535	radical SAM domain protein
MUA90_RS05290	COG0693	protein deglycase activity
MUA90_RS05295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA90_RS05300	COG2137	regulation of response to DNA damage stimulus
MUA90_RS05310	COG1388	LysM domain
MUA90_RS05310	COG1134	teichoic acid transport
MUA90_RS05320	COG1988	membrane-bound metal-dependent
MUA90_RS05325	COG1194	a g-specific adenine glycosylase
MUA90_RS05330	COG3557	Belongs to the UPF0374 family
MUA90_RS05340	COG4129	membrane
MUA90_RS05345	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUA90_RS05350	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MUA90_RS05355	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA90_RS05360	COG0735	belongs to the Fur family
MUA90_RS05545	COG3620	sequence-specific DNA binding
MUA90_RS05550	COG3561	AntA/AntB antirepressor
MUA90_RS05720	COG4695	Portal protein
MUA90_RS05775	COG0739	heme binding
MUA90_RS05825	COG1388	LysM domain
MUA90_RS05825	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA90_RS05845	COG0765	amino acid transport
MUA90_RS05850	COG1126	abc transporter atp-binding protein
MUA90_RS05855	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
MUA90_RS05860	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MUA90_RS05870	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUA90_RS05880	COG0363	glucosamine-6-phosphate deaminase activity
MUA90_RS05890	COG0114	fumarate hydratase activity
MUA90_RS05895	COG0564	pseudouridine synthase activity
MUA90_RS05900	COG2203	Gaf domain
MUA90_RS05900	COG4585	Histidine kinase
MUA90_RS05905	COG2197	response regulator
MUA90_RS05920	COG4399	Belongs to the UPF0754 family
MUA90_RS05925	COG3679	Belongs to the UPF0342 family
MUA90_RS05930	COG0420	3'-5' exonuclease activity
MUA90_RS05935	COG4717	serine-type aminopeptidase activity
MUA90_RS05940	COG3481	metal-dependent phosphohydrolase, HD sub domain
MUA90_RS05950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MUA90_RS05965	COG0537	adenosine 5'-monophosphoramidase activity
MUA90_RS05970	COG1131	(ABC) transporter
MUA90_RS05975	COG4473	ABC transporter
MUA90_RS05985	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
MUA90_RS05990	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
MUA90_RS05995	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
MUA90_RS06005	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MUA90_RS06015	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
MUA90_RS06025	COG1827	regulation of RNA biosynthetic process
MUA90_RS06100	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
MUA90_RS06105	COG0494	nUDIX hydrolase
MUA90_RS06110	COG1506	peptidase
MUA90_RS06115	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
MUA90_RS06120	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MUA90_RS06130	COG0656	L-ascorbic acid biosynthetic process
MUA90_RS06135	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUA90_RS06150	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MUA90_RS06175	COG3266	domain, Protein
MUA90_RS06175	COG4193	domain, Protein
MUA90_RS06175	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA90_RS06185	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUA90_RS06185	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUA90_RS06190	COG0307	riboflavin synthase, alpha
MUA90_RS06195	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUA90_RS06195	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUA90_RS06200	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
MUA90_RS06205	COG0506	proline dehydrogenase activity
MUA90_RS06210	COG2267	carboxylic ester hydrolase activity
MUA90_RS06215	COG0039	L-malate dehydrogenase activity
MUA90_RS06220	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
MUA90_RS06225	COG1242	4 iron, 4 sulfur cluster binding
MUA90_RS06230	COG2814	Major facilitator Superfamily
MUA90_RS06235	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MUA90_RS06245	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUA90_RS06250	COG2081	HI0933 family
MUA90_RS06255	COG2244	polysaccharide biosynthetic process
MUA90_RS06260	COG1187	pseudouridine synthase activity
MUA90_RS06270	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA90_RS06280	COG0510	thiamine kinase activity
MUA90_RS06285	COG0220	tRNA (guanine-N7-)-methyltransferase activity
MUA90_RS06290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUA90_RS06300	COG1363	Peptidase, m42
MUA90_RS06305	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA90_RS06310	COG4848	Belongs to the UPF0354 family
MUA90_RS06315	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA90_RS06320	COG1674	ftsk spoiiie
MUA90_RS06325	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
MUA90_RS06330	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
MUA90_RS06340	COG1605	Chorismate mutase
MUA90_RS06340	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
MUA90_RS06345	COG1609	Transcriptional regulator
MUA90_RS06355	COG0454	-acetyltransferase
MUA90_RS06360	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUA90_RS06365	COG2759	Belongs to the formate--tetrahydrofolate ligase family
MUA90_RS06370	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA90_RS06375	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MUA90_RS06380	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUA90_RS06385	COG0204	Acyl-transferase
MUA90_RS06390	COG1263	PTS System
MUA90_RS06390	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA90_RS06400	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MUA90_RS06405	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MUA90_RS06410	COG1764	response to oxidative stress
MUA90_RS06415	COG0584	glycerophosphoryl diester phosphodiesterase
MUA90_RS06425	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
MUA90_RS06430	COG1956	GAF domain-containing protein
MUA90_RS06435	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
MUA90_RS06440	COG1104	cysteine desulfurase activity
MUA90_RS06445	COG0301	tRNA thio-modification
MUA90_RS06455	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
MUA90_RS06460	COG0827	DNA restriction-modification system
MUA90_RS06465	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MUA90_RS06470	COG0589	response to stress
MUA90_RS06480	COG0006	proline dipeptidase activity
MUA90_RS06485	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
MUA90_RS06495	COG4109	DRTGG domain
MUA90_RS06500	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MUA90_RS06505	COG0587	DNA-directed DNA polymerase activity
MUA90_RS06510	COG0281	malic enzyme
MUA90_RS06515	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
MUA90_RS06520	COG0825	malonyl-CoA metabolic process
MUA90_RS06525	COG0205	6-phosphofructokinase activity
MUA90_RS06530	COG0469	pyruvate kinase activity
MUA90_RS06535	COG2814	Major facilitator Superfamily
MUA90_RS06540	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA90_RS06545	COG1113	amino acid transport
MUA90_RS06550	COG0372	Belongs to the citrate synthase family
MUA90_RS06555	COG0538	isocitrate dehydrogenase activity
MUA90_RS06560	COG0745	RESPONSE REGULATOR receiver
MUA90_RS06565	COG5002	protein histidine kinase activity
MUA90_RS06570	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA90_RS06570	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA90_RS06575	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MUA90_RS06580	COG0237	dephospho-CoA kinase activity
MUA90_RS06590	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MUA90_RS06600	COG1484	DNA-dependent DNA replication
MUA90_RS06605	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUA90_RS06610	COG0833	amino acid
MUA90_RS06615	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MUA90_RS06620	COG0291	Belongs to the bacterial ribosomal protein bL35 family
MUA90_RS06625	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
MUA90_RS06630	COG4112	unkown
MUA90_RS06640	COG0544	peptidyl-prolyl cis-trans isomerase activity
MUA90_RS06645	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
MUA90_RS06650	COG0218	Necessary for normal cell division and for the maintenance of normal septation
MUA90_RS06655	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
MUA90_RS06660	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MUA90_RS06665	COG0181	hydroxymethylbilane synthase activity
MUA90_RS06680	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUA90_RS06700	COG2801	Transposase and inactivated derivatives
MUA90_RS06710	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
MUA90_RS06725	COG2818	Glycosylase
MUA90_RS06730	COG0525	valine-tRNA ligase activity
MUA90_RS06735	COG0285	dihydrofolate synthase activity
MUA90_RS06740	COG2003	Belongs to the UPF0758 family
MUA90_RS06760	COG1792	Involved in formation and maintenance of cell shape
MUA90_RS06770	COG0261	This protein binds to 23S rRNA in the presence of protein L20
MUA90_RS06775	COG2868	ribosomal protein
MUA90_RS06780	COG0211	Belongs to the bacterial ribosomal protein bL27 family
MUA90_RS06785	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
MUA90_RS06790	COG4492	Belongs to the UPF0735 family
MUA90_RS06795	COG0632	four-way junction helicase activity
MUA90_RS06800	COG2255	four-way junction helicase activity
MUA90_RS06805	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
MUA90_RS06810	COG0343	queuine tRNA-ribosyltransferase activity
MUA90_RS06815	COG1862	Preprotein translocase
MUA90_RS06820	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUA90_RS06820	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUA90_RS06825	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
MUA90_RS06825	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MUA90_RS06830	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA90_RS06840	COG1490	D-aminoacyl-tRNA deacylase activity
MUA90_RS06845	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUA90_RS06850	COG0124	histidyl-tRNA synthetase
MUA90_RS06855	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
MUA90_RS06865	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MUA90_RS06870	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MUA90_RS06875	COG1959	2 iron, 2 sulfur cluster binding
MUA90_RS06885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA90_RS06890	COG1104	cysteine desulfurase activity
MUA90_RS06895	COG0482	sulfurtransferase activity
MUA90_RS06905	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MUA90_RS06910	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MUA90_RS06915	COG4472	Bacterial protein of unknown function (DUF965)
MUA90_RS06920	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MUA90_RS06925	COG3906	Belongs to the UPF0473 family
MUA90_RS06930	COG4122	O-methyltransferase activity
MUA90_RS06935	COG0826	peptidase U32
MUA90_RS06940	COG0826	peptidase U32
MUA90_RS06945	COG0572	uridine kinase
MUA90_RS06950	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
MUA90_RS06955	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MUA90_RS06960	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
MUA90_RS06965	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MUA90_RS06970	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUA90_RS06975	COG1534	Rna-binding protein
MUA90_RS06985	COG1713	HD superfamily hydrolase involved in NAD metabolism
MUA90_RS06990	COG0799	negative regulation of ribosome biogenesis
MUA90_RS07000	COG1596	polysaccharide export
MUA90_RS07000	COG1555	photosystem II stabilization
MUA90_RS07005	COG2131	deaminase
MUA90_RS07015	COG1466	dna polymerase III delta subunit
MUA90_RS07020	COG0268	Binds directly to 16S ribosomal RNA
MUA90_RS07025	COG0481	GTPase activity
MUA90_RS07030	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MUA90_RS07035	COG1420	regulation of RNA biosynthetic process
MUA90_RS07040	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MUA90_RS07045	COG0443	Heat shock 70 kDa protein
MUA90_RS07050	COG0484	heat shock protein binding
MUA90_RS07055	COG2264	protein methyltransferase activity
MUA90_RS07060	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MUA90_RS07065	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUA90_RS07075	COG1030	water channel activity
MUA90_RS07080	COG4864	UPF0365 protein
MUA90_RS07095	COG1702	phosphate starvation-inducible protein PhoH
MUA90_RS07100	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
MUA90_RS07105	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
MUA90_RS07115	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MUA90_RS07120	COG1381	Involved in DNA repair and RecF pathway recombination
MUA90_RS07125	COG0423	glycine-tRNA ligase activity
MUA90_RS07130	COG0517	IMP dehydrogenase activity
MUA90_RS07135	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
MUA90_RS07145	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
MUA90_RS07150	COG2384	SAM-dependent methyltransferase
MUA90_RS07160	COG0513	Belongs to the DEAD box helicase family
MUA90_RS07165	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
MUA90_RS07170	COG1121	(ABC) transporter
MUA90_RS07175	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUA90_RS07180	COG0735	belongs to the Fur family
MUA90_RS07190	COG0768	penicillin binding
MUA90_RS07195	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MUA90_RS07205	COG4483	Protein conserved in bacteria
MUA90_RS07210	COG1940	carbohydrate kinase activity
MUA90_RS07215	COG0011	TIGRFAM Protein of
MUA90_RS07220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUA90_RS07230	COG1459	type II secretion system
MUA90_RS07250	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUA90_RS07255	COG0404	The glycine cleavage system catalyzes the degradation of glycine
MUA90_RS07260	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUA90_RS07265	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUA90_RS07270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUA90_RS07275	COG0095	Lipoate-protein ligase
MUA90_RS07290	COG0006	proline dipeptidase activity
MUA90_RS07295	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MUA90_RS07300	COG0511	ligase activity, forming carbon-carbon bonds
MUA90_RS07305	COG0439	Biotin carboxylase
MUA90_RS07315	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUA90_RS07320	COG1570	exodeoxyribonuclease VII activity
MUA90_RS07325	COG1722	exodeoxyribonuclease VII activity
MUA90_RS07335	COG1438	arginine binding
MUA90_RS07340	COG0497	DNA recombination
MUA90_RS07345	COG0280	phosphate acetyltransferase
MUA90_RS07350	COG3426	butyrate kinase activity
MUA90_RS07355	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA90_RS07360	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA90_RS07365	COG0022	dehydrogenase e1 component
MUA90_RS07370	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA90_RS07380	COG4129	membrane
MUA90_RS07385	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUA90_RS07400	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUA90_RS07405	COG1234	tRNA 3'-trailer cleavage
MUA90_RS07410	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MUA90_RS07420	COG0667	Aldo Keto reductase
MUA90_RS07425	COG0494	nUDIX hydrolase
MUA90_RS07430	COG0735	belongs to the Fur family
MUA90_RS07435	COG4974	Belongs to the 'phage' integrase family
MUA90_RS07445	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MUA90_RS07450	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MUA90_RS07455	COG1187	pseudouridine synthase activity
MUA90_RS07460	COG0745	RESPONSE REGULATOR receiver
MUA90_RS07475	COG1141	Ferredoxin
MUA90_RS07485	COG0514	ATP-dependent DNA helicase (RecQ)
MUA90_RS07490	COG1388	LysM domain
MUA90_RS07495	COG0492	ferredoxin-NADP+ reductase activity
MUA90_RS07505	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
MUA90_RS07515	COG1160	GTP binding
MUA90_RS07520	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
MUA90_RS07535	COG2226	methyltransferase
MUA90_RS07540	COG0142	geranyltranstransferase activity
MUA90_RS07545	COG0105	UTP biosynthetic process
MUA90_RS07550	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
MUA90_RS07555	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
MUA90_RS07560	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MUA90_RS07565	COG0457	Tetratricopeptide repeat
MUA90_RS07570	COG5582	Belongs to the UPF0302 family
MUA90_RS07575	COG4347	Protein of unknown function (DUF1405)
MUA90_RS07580	COG2738	Putative neutral zinc metallopeptidase
MUA90_RS07585	COG1694	Mazg nucleotide pyrophosphohydrolase
MUA90_RS07590	COG0438	transferase activity, transferring glycosyl groups
MUA90_RS07595	COG0617	tRNA 3'-terminal CCA addition
MUA90_RS07605	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MUA90_RS07605	COG1199	ATP-dependent helicase activity
MUA90_RS07610	COG0017	Asparaginyl-tRNA synthetase
MUA90_RS07615	COG3935	DnaD domain protein
MUA90_RS07620	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MUA90_RS07630	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA90_RS07630	COG4499	WXG100 protein secretion system (Wss), protein YukC
MUA90_RS07635	COG3331	DNA recombination
MUA90_RS07645	COG4474	Belongs to the UPF0398 family
MUA90_RS07650	COG3599	regulation of cell shape
MUA90_RS07660	COG0116	Belongs to the methyltransferase superfamily
MUA90_RS07665	COG2962	Rard protein
MUA90_RS07670	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
MUA90_RS07675	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA90_RS07685	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
MUA90_RS07695	COG1413	lyase activity
MUA90_RS07725	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUA90_RS07740	COG0793	Belongs to the peptidase S41A family
MUA90_RS07750	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUA90_RS07755	COG0671	phosphoesterase, PA-phosphatase related
MUA90_RS07765	COG0745	RESPONSE REGULATOR receiver
MUA90_RS07770	COG5002	protein histidine kinase activity
MUA90_RS07805	COG0714	Associated with various cellular activities
MUA90_RS07810	COG4548	von Willebrand factor, type A
MUA90_RS07815	COG1114	Component of the transport system for branched-chain amino acids
MUA90_RS07820	COG1597	lipid kinase activity
MUA90_RS07825	COG3853	Toxic anion resistance protein (TelA)
MUA90_RS07845	COG1278	Cold shock
MUA90_RS07865	COG1473	amidohydrolase
MUA90_RS07870	COG2171	N-acyltransferase activity
MUA90_RS07875	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
MUA90_RS07880	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUA90_RS07885	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MUA90_RS07890	COG0527	aspartate kinase activity
MUA90_RS07895	COG0488	(ABC) transporter
MUA90_RS07900	COG2996	Protein conserved in bacteria
MUA90_RS07905	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
MUA90_RS07910	COG0573	inorganic phosphate transmembrane transporter activity
MUA90_RS07915	COG0581	inorganic phosphate transmembrane transporter activity
MUA90_RS07920	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUA90_RS07925	COG0704	Plays a role in the regulation of phosphate uptake
MUA90_RS07935	COG1164	Oligoendopeptidase f
MUA90_RS07945	COG0747	negative chemotaxis
MUA90_RS07985	COG2348	transferase activity, transferring amino-acyl groups
MUA90_RS07990	COG2348	transferase activity, transferring amino-acyl groups
MUA90_RS07995	COG0159	tryptophan synthase activity
MUA90_RS08000	COG0133	tryptophan synthase activity
MUA90_RS08005	COG0135	phosphoribosylanthranilate isomerase activity
MUA90_RS08010	COG0134	indole-3-glycerol-phosphate synthase activity
MUA90_RS08015	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MUA90_RS08020	COG0512	Glutamine amidotransferase of anthranilate synthase
MUA90_RS08025	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MUA90_RS08030	COG1363	Peptidase, m42
MUA90_RS08035	COG0287	Prephenate dehydrogenase
MUA90_RS08040	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUA90_RS08075	COG0628	permease
MUA90_RS08085	COG1263	PTS System
MUA90_RS08085	COG2190	(PTS) system
MUA90_RS08085	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA90_RS08090	COG3711	transcriptional antiterminator
MUA90_RS08095	COG1115	amino acid carrier protein
MUA90_RS08100	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUA90_RS08105	COG0187	DNA topoisomerase II activity
MUA90_RS08110	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
MUA90_RS08115	COG4841	protein insertion into membrane
MUA90_RS08125	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MUA90_RS08130	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA90_RS08135	COG1970	mechanosensitive ion channel activity
MUA90_RS08140	COG0419	ATPase involved in DNA repair
MUA90_RS08145	COG0420	3'-5' exonuclease activity
MUA90_RS08150	COG4846	Membrane protein involved in cytochrome C biogenesis
MUA90_RS08155	COG3763	UPF0154 protein
MUA90_RS08160	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
MUA90_RS08165	COG4224	UPF0291 protein
MUA90_RS08175	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MUA90_RS08185	COG2249	NAD(P)H dehydrogenase (quinone) activity
MUA90_RS08190	COG2340	Cysteine-rich secretory protein family
MUA90_RS08195	COG0516	GMP reductase activity
MUA90_RS08205	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUA90_RS08215	COG0833	amino acid
MUA90_RS08230	COG0083	homoserine kinase activity
MUA90_RS08235	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MUA90_RS08240	COG0460	homoserine dehydrogenase
MUA90_RS08245	COG0527	aspartate kinase activity
MUA90_RS08275	COG1525	nuclease
MUA90_RS08285	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUA90_RS08295	COG0789	Transcriptional regulator
MUA90_RS08310	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
MUA90_RS08315	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MUA90_RS08325	COG1923	regulation of RNA biosynthetic process
MUA90_RS08330	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
MUA90_RS08350	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
MUA90_RS08355	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MUA90_RS08360	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MUA90_RS08370	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
MUA90_RS08375	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MUA90_RS08380	COG0584	glycerophosphoryl diester phosphodiesterase
MUA90_RS08390	COG4550	Control of competence regulator ComK, YlbF/YmcA
MUA90_RS08395	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUA90_RS08405	COG0601	transmembrane transport
MUA90_RS08410	COG4608	Belongs to the ABC transporter superfamily
MUA90_RS08435	COG1013	pyruvate-flavodoxin oxidoreductase activity
MUA90_RS08440	COG0674	pyruvate-flavodoxin oxidoreductase activity
MUA90_RS08440	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
MUA90_RS08445	COG1692	metallophosphoesterase
MUA90_RS08455	COG0583	DNA-binding transcription factor activity
MUA90_RS08475	COG1418	mRNA catabolic process
MUA90_RS08480	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
MUA90_RS08485	COG1058	Belongs to the CinA family
MUA90_RS08485	COG1546	Belongs to the CinA family
MUA90_RS08505	COG0300	oxidoreductase activity
MUA90_RS08510	COG0612	Peptidase, M16
MUA90_RS08515	COG0612	Peptidase, M16
MUA90_RS08520	COG2188	Transcriptional regulator
MUA90_RS08530	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUA90_RS08535	COG1185	polyribonucleotide nucleotidyltransferase activity
MUA90_RS08540	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
MUA90_RS08545	COG0196	riboflavin kinase activity
MUA90_RS08550	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MUA90_RS08560	COG3850	Histidine kinase
MUA90_RS08560	COG5002	protein histidine kinase activity
MUA90_RS08565	COG0745	RESPONSE REGULATOR receiver
MUA90_RS08575	COG1929	Belongs to the glycerate kinase type-1 family
MUA90_RS08580	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MUA90_RS08590	COG0584	glycerophosphoryl diester phosphodiesterase
MUA90_RS08600	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
MUA90_RS08605	COG1358	cellular component organization or biogenesis
MUA90_RS08610	COG2740	Nucleic-acid-binding protein implicated in transcription termination
MUA90_RS08615	COG0195	Participates in both transcription termination and antitermination
MUA90_RS08620	COG0779	Required for maturation of 30S ribosomal subunits
MUA90_RS08625	COG2176	DNA-directed DNA polymerase activity
MUA90_RS08630	COG0442	prolyl-tRNA aminoacylation
MUA90_RS08640	COG4589	Belongs to the CDS family
MUA90_RS08650	COG0233	cytoplasmic translational termination
MUA90_RS08655	COG0528	UMP kinase activity
MUA90_RS08660	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
MUA90_RS08665	COG0052	Belongs to the universal ribosomal protein uS2 family
MUA90_RS08670	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
MUA90_RS08675	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
MUA90_RS08680	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
MUA90_RS08685	COG4974	Belongs to the 'phage' integrase family
MUA90_RS08690	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
MUA90_RS08695	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUA90_RS08700	COG0758	DNA mediated transformation
MUA90_RS08710	COG0045	succinate-CoA ligase (ADP-forming) activity
MUA90_RS08715	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUA90_RS08750	COG4149	molybdate abc transporter
MUA90_RS08765	COG1349	DNA-binding transcription factor activity
MUA90_RS08775	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MUA90_RS08780	COG4485	Bacterial membrane protein, YfhO
MUA90_RS08790	COG3842	ATPase activity
MUA90_RS08810	COG0420	3'-5' exonuclease activity
MUA90_RS08820	COG0335	large ribosomal subunit rRNA binding
MUA90_RS08825	COG0336	Belongs to the RNA methyltransferase TrmD family
MUA90_RS08830	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MUA90_RS08835	COG0228	four-way junction DNA binding
MUA90_RS08840	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MUA90_RS08845	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
MUA90_RS08850	COG0552	protein localization to endoplasmic reticulum
MUA90_RS08855	COG1196	nuclear chromosome segregation
MUA90_RS08860	COG0571	ribonuclease III activity
MUA90_RS08865	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUA90_RS08880	COG0416	fatty acid biosynthetic process
MUA90_RS08885	COG1349	DNA-binding transcription factor activity
MUA90_RS08890	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MUA90_RS08895	COG1760	l-serine dehydratase
MUA90_RS08900	COG1760	l-serine dehydratase
MUA90_RS08905	COG1461	Dihydroxyacetone kinase
MUA90_RS08910	COG1302	Protein conserved in bacteria
MUA90_RS08925	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MUA90_RS08930	COG1162	GTPase activity
MUA90_RS08940	COG0631	protein serine/threonine phosphatase activity
MUA90_RS08945	COG0820	rRNA (adenine-C2-)-methyltransferase activity
MUA90_RS08950	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUA90_RS08950	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
MUA90_RS08955	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MUA90_RS08990	COG1215	transferase activity, transferring glycosyl groups
MUA90_RS09025	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MUA90_RS09030	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MUA90_RS09040	COG1758	RNA polymerase activity
MUA90_RS09050	COG1293	RNA-binding protein homologous to eukaryotic snRNP
MUA90_RS09060	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MUA90_RS09080	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MUA90_RS09085	COG0284	orotidine-5'-phosphate decarboxylase activity
MUA90_RS09090	COG0167	dihydroorotate dehydrogenase activity
MUA90_RS09100	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUA90_RS09105	COG0505	Belongs to the CarA family
MUA90_RS09115	COG0540	Belongs to the ATCase OTCase family
MUA90_RS09125	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MUA90_RS09140	COG1518	maintenance of DNA repeat elements
MUA90_RS09150	COG0564	pseudouridine synthase activity
MUA90_RS09155	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MUA90_RS09160	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUA90_RS09160	COG3942	CHAP domain
MUA90_RS09170	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MUA90_RS09175	COG3599	regulation of cell shape
MUA90_RS09185	COG0762	integral membrane protein
MUA90_RS09190	COG1799	cell septum assembly
MUA90_RS09195	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MUA90_RS09200	COG1496	oxidoreductase activity
MUA90_RS09205	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MUA90_RS09210	COG0849	cell division
MUA90_RS09220	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUA90_RS09225	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUA90_RS09230	COG0768	penicillin binding
MUA90_RS09235	COG4839	cell division protein FtsL
MUA90_RS09240	COG0275	rRNA processing
MUA90_RS09245	COG2001	Belongs to the MraZ family
MUA90_RS09250	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
MUA90_RS09255	COG0454	-acetyltransferase
MUA90_RS09260	COG1011	Hydrolase
MUA90_RS09330	COG2176	DNA-directed DNA polymerase activity
MUA90_RS09350	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
MUA90_RS09355	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MUA90_RS09365	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MUA90_RS09370	COG1053	succinate dehydrogenase
MUA90_RS09375	COG2009	succinate dehydrogenase
MUA90_RS09380	COG0322	excinuclease ABC activity
MUA90_RS09385	COG3118	belongs to the thioredoxin family
MUA90_RS09390	COG1193	negative regulation of DNA recombination
MUA90_RS09395	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MUA90_RS09395	COG1796	DNA polymerase
MUA90_RS09410	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUA90_RS09420	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MUA90_RS09425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUA90_RS09430	COG0333	Belongs to the bacterial ribosomal protein bL32 family
MUA90_RS09440	COG1323	Belongs to the UPF0348 family
MUA90_RS09450	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MUA90_RS09455	COG0742	ribosomal rna small subunit methyltransferase
MUA90_RS09475	COG3679	Belongs to the UPF0342 family
MUA90_RS09490	COG0109	protoheme IX farnesyltransferase activity
MUA90_RS09495	COG1612	heme a metabolic process
MUA90_RS09505	COG0772	Belongs to the SEDS family
MUA90_RS09510	COG4838	Belongs to the UPF0358 family
MUA90_RS09515	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MUA90_RS09525	COG1217	gtp-binding protein TYPA
MUA90_RS09535	COG0483	inositol monophosphate 1-phosphatase activity
MUA90_RS09540	COG4493	Belongs to the UPF0637 family
MUA90_RS09545	COG1914	H( )-stimulated, divalent metal cation uptake system
MUA90_RS09570	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
MUA90_RS09575	COG1177	transmembrane transport
MUA90_RS09580	COG1176	ABC-type spermidine putrescine transport system, permease component I
MUA90_RS09585	COG3842	ATPase activity
MUA90_RS09595	COG4476	Belongs to the UPF0223 family
MUA90_RS09640	COG5503	Protein of unknown function (DUF1447)
MUA90_RS09650	COG0569	domain protein
MUA90_RS09655	COG1294	oxidase, subunit
MUA90_RS09660	COG1271	oxidase subunit
MUA90_RS09670	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUA90_RS09685	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
MUA90_RS09700	COG1122	ATPase activity
MUA90_RS09705	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MUA90_RS09715	COG2801	Transposase and inactivated derivatives
MUA90_RS09725	COG0151	Belongs to the GarS family
MUA90_RS09730	COG0138	bifunctional purine biosynthesis protein purh
MUA90_RS09740	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
MUA90_RS09745	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
MUA90_RS09750	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUA90_RS09760	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUA90_RS09765	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
MUA90_RS09770	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MUA90_RS09775	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MUA90_RS09780	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
MUA90_RS09785	COG1363	Peptidase, m42
MUA90_RS09790	COG1017	nitric oxide dioxygenase activity
MUA90_RS09790	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MUA90_RS09800	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MUA90_RS09810	COG1845	cytochrome c oxidase, subunit III
MUA90_RS09815	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
MUA90_RS09825	COG1349	DNA-binding transcription factor activity
MUA90_RS09835	COG0698	ribose 5-phosphate isomerase
MUA90_RS09840	COG1105	Belongs to the carbohydrate kinase PfkB family
MUA90_RS09860	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUA90_RS09865	COG2723	6-phospho-beta-galactosidase activity
MUA90_RS09895	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUA90_RS09900	COG1316	TRANSCRIPTIONal
MUA90_RS09925	COG3594	Acyltransferase
MUA90_RS09930	COG0436	Aminotransferase
MUA90_RS09940	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MUA90_RS09950	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
MUA90_RS09955	COG1169	isochorismate synthase
MUA90_RS09960	COG1575	Belongs to the MenA family. Type 1 subfamily
MUA90_RS09990	COG4873	Protein conserved in bacteria
MUA90_RS10030	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
MUA90_RS10035	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MUA90_RS10040	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MUA90_RS10045	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUA90_RS10050	COG0131	Imidazoleglycerol-phosphate dehydratase
MUA90_RS10055	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MUA90_RS10060	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
MUA90_RS10065	COG0107	imidazoleglycerol-phosphate synthase activity
MUA90_RS10070	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MUA90_RS10070	COG0140	phosphoribosyl-ATP diphosphatase activity
MUA90_RS10075	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUA90_RS10080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUA90_RS10085	COG0861	Integral membrane protein TerC family
MUA90_RS10090	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MUA90_RS10100	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MUA90_RS10105	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUA90_RS10110	COG2814	Major facilitator Superfamily
MUA90_RS10125	COG0640	Transcriptional regulator
MUA90_RS10135	COG2226	methyltransferase
MUA90_RS10155	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
MUA90_RS10160	COG2382	esterase
MUA90_RS10165	COG1115	amino acid carrier protein
MUA90_RS10170	COG0628	permease
MUA90_RS10175	COG2814	Major facilitator Superfamily
MUA90_RS10185	COG0475	glutathione-regulated potassium exporter activity
MUA90_RS10185	COG0569	domain protein
MUA90_RS10190	COG2239	Acts as a magnesium transporter
MUA90_RS10195	COG0564	pseudouridine synthase activity
MUA90_RS10200	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MUA90_RS10205	COG2357	RelA SpoT domain protein
MUA90_RS10215	COG4116	CYTH
MUA90_RS10220	COG2346	COG2346, Truncated hemoglobins
MUA90_RS10240	COG1164	Oligoendopeptidase f
MUA90_RS10245	COG4862	establishment of competence for transformation
MUA90_RS10250	COG1393	Belongs to the ArsC family
MUA90_RS10255	COG0180	Tryptophanyl-tRNA synthetase
MUA90_RS10265	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
MUA90_RS10275	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA90_RS10280	COG4166	transmembrane transport
MUA90_RS10285	COG4608	Belongs to the ABC transporter superfamily
MUA90_RS10290	COG0444	Belongs to the ABC transporter superfamily
MUA90_RS10295	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUA90_RS10300	COG0601	transmembrane transport
MUA90_RS10320	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUA90_RS10345	COG0561	phosphatase activity
MUA90_RS10350	COG0446	pyridine nucleotide-disulphide oxidoreductase
MUA90_RS10360	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUA90_RS10365	COG1074	ATP-dependent DNA helicase activity
MUA90_RS10370	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
MUA90_RS10400	COG0137	argininosuccinate synthase activity
MUA90_RS10405	COG0165	Argininosuccinate lyase
MUA90_RS10420	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUA90_RS10425	COG1012	belongs to the aldehyde dehydrogenase family
MUA90_RS10430	COG1902	pentaerythritol trinitrate reductase activity
MUA90_RS10435	COG1098	S1 RNA binding domain
MUA90_RS10445	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
MUA90_RS10455	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MUA90_RS10465	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA90_RS10465	COG2111	Na H antiporter
MUA90_RS10470	COG2111	Na H antiporter
MUA90_RS10475	COG1006	Multisubunit Na H antiporter MnhC subunit
MUA90_RS10480	COG0651	ATP synthesis coupled electron transport
MUA90_RS10485	COG1863	multisubunit Na H antiporter MnhE subunit
MUA90_RS10490	COG2212	antiporter activity
MUA90_RS10510	COG2050	protein possibly involved in aromatic compounds catabolism
MUA90_RS10515	COG2056	Na+-H+ antiporter family
MUA90_RS10530	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MUA90_RS10535	COG1252	NADH dehydrogenase
MUA90_RS10540	COG0316	Belongs to the HesB IscA family
MUA90_RS10545	COG4844	belongs to the
MUA90_RS10550	COG1252	NADH dehydrogenase
MUA90_RS10555	COG4837	Protein of unknown function (DUF1462)
MUA90_RS10560	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
MUA90_RS10565	COG0789	Transcriptional regulator
MUA90_RS10570	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
MUA90_RS10580	COG1696	Membrane protein involved in D-alanine export
MUA90_RS10585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUA90_RS10595	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA90_RS10600	COG0647	UMP catabolic process
MUA90_RS10605	COG2445	Protein of unknown function DUF86
MUA90_RS10615	COG4470	Protein conserved in bacteria
MUA90_RS10620	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MUA90_RS10625	COG0737	Belongs to the 5'-nucleotidase family
MUA90_RS10630	COG0730	response to heat
MUA90_RS10635	COG1801	Protein of unknown function DUF72
MUA90_RS10650	COG1253	flavin adenine dinucleotide binding
MUA90_RS10660	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA90_RS10660	COG1388	LysM domain
MUA90_RS10705	COG0739	heme binding
MUA90_RS10970	COG4974	Belongs to the 'phage' integrase family
MUA90_RS10980	COG0822	iron-sulfur transferase activity
MUA90_RS10990	COG0719	Fe-S assembly protein
MUA90_RS10995	COG0396	ATPase activity
MUA90_RS11010	COG1464	Belongs to the NlpA lipoprotein family
MUA90_RS11015	COG2011	ABC-type metal ion transport system permease component
MUA90_RS11020	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUA90_RS11025	COG3118	belongs to the thioredoxin family
MUA90_RS11030	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUA90_RS11035	COG0509	glycine decarboxylation via glycine cleavage system
MUA90_RS11040	COG1393	Belongs to the ArsC family
MUA90_RS11045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA90_RS11055	COG0710	3-dehydroquinate dehydratase activity
MUA90_RS11075	COG1704	LemA family
MUA90_RS11080	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUA90_RS11090	COG1278	Cold shock
MUA90_RS11105	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
MUA90_RS11110	COG0557	exoribonuclease II activity
MUA90_RS11115	COG1647	Serine aminopeptidase, S33
MUA90_RS11120	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUA90_RS11135	COG0148	phosphopyruvate hydratase activity
MUA90_RS11140	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MUA90_RS11145	COG0149	triose-phosphate isomerase activity
MUA90_RS11150	COG0126	phosphoglycerate kinase activity
MUA90_RS11185	COG0740	serine-type endopeptidase activity
MUA90_RS11195	COG1114	Component of the transport system for branched-chain amino acids
MUA90_RS11200	COG2814	Major facilitator Superfamily
MUA90_RS11205	COG1481	regulation of sporulation
MUA90_RS11210	COG0391	Required for morphogenesis under gluconeogenic growth conditions
MUA90_RS11215	COG1660	Displays ATPase and GTPase activities
MUA90_RS11230	COG0110	maltose O-acetyltransferase activity
MUA90_RS11235	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
MUA90_RS11240	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
MUA90_RS11245	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUA90_RS11250	COG0556	nucleotide-excision repair
MUA90_RS11265	COG3942	CHAP domain
MUA90_RS11285	COG0653	protein targeting
MUA90_RS11290	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MUA90_RS11300	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
MUA90_RS11310	COG1739	Uncharacterized protein family UPF0029
MUA90_RS11315	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUA90_RS11320	COG2199	diguanylate cyclase activity
MUA90_RS11335	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUA90_RS11340	COG1929	Belongs to the glycerate kinase type-1 family
MUA90_RS11360	COG0812	UDP-N-acetylmuramate dehydrogenase activity
MUA90_RS11375	COG0697	spore germination
MUA90_RS11380	COG4607	ABC-type enterochelin transport system periplasmic component
MUA90_RS11385	COG4604	ABC transporter, ATP-binding protein
MUA90_RS11390	COG4605	iron ion homeostasis
MUA90_RS11395	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA90_RS11400	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUA90_RS11405	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUA90_RS11410	COG1780	Probably involved in ribonucleotide reductase function
MUA90_RS11415	COG0697	spore germination
MUA90_RS11420	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
MUA90_RS11425	COG3104	oligopeptide transport
MUA90_RS11430	COG3104	oligopeptide transport
MUA90_RS11440	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUA90_RS11445	COG1174	glycine betaine transport
MUA90_RS11455	COG0514	ATP-dependent DNA helicase (RecQ)
MUA90_RS11460	COG0488	(ABC) transporter
MUA90_RS11465	COG1368	sulfuric ester hydrolase activity
MUA90_RS11475	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUA90_RS11490	COG0512	Glutamine amidotransferase of anthranilate synthase
MUA90_RS11490	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MUA90_RS11495	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
MUA90_RS11500	COG0720	synthase
MUA90_RS11520	COG0656	L-ascorbic acid biosynthetic process
MUA90_RS11525	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
MUA90_RS11550	COG1253	flavin adenine dinucleotide binding
MUA90_RS11555	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA90_RS11555	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA90_RS11555	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA90_RS11560	COG1105	Belongs to the carbohydrate kinase PfkB family
MUA90_RS11565	COG1349	DNA-binding transcription factor activity
MUA90_RS11570	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MUA90_RS11580	COG0039	L-malate dehydrogenase activity
MUA90_RS11585	COG1464	Belongs to the NlpA lipoprotein family
MUA90_RS11605	COG0471	metal ion transport
MUA90_RS11610	COG0039	L-malate dehydrogenase activity
MUA90_RS11620	COG4989	oxidoreductase activity
MUA90_RS11625	COG0523	cobalamin synthesis protein
MUA90_RS11635	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MUA90_RS11640	COG4988	ABC transporter
MUA90_RS11645	COG1968	undecaprenyl-diphosphatase activity
MUA90_RS11655	COG1671	Belongs to the UPF0178 family
MUA90_RS11660	COG1611	Belongs to the LOG family
MUA90_RS11685	COG2839	Protein conserved in bacteria
MUA90_RS11695	COG0583	DNA-binding transcription factor activity
MUA90_RS11765	COG0217	transcriptional regulatory protein
MUA90_RS11790	COG3942	CHAP domain
MUA90_RS11790	COG1388	LysM domain
MUA90_RS11795	COG0306	phosphate transporter
MUA90_RS11800	COG1392	Phosphate transport regulator
MUA90_RS11805	COG0577	efflux transmembrane transporter activity
MUA90_RS11810	COG1136	(ABC) transporter
MUA90_RS11815	COG2205	protein histidine kinase activity
MUA90_RS11820	COG0745	RESPONSE REGULATOR receiver
MUA90_RS11830	COG0657	acetylesterase activity
MUA90_RS11835	COG3949	Membrane
MUA90_RS11845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA90_RS11850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA90_RS11855	COG1120	ATPase activity
MUA90_RS11860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUA90_RS11865	COG2801	Transposase and inactivated derivatives
MUA90_RS11875	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUA90_RS11880	COG1132	(ABC) transporter
MUA90_RS11885	COG1686	Belongs to the peptidase S11 family
MUA90_RS11890	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MUA90_RS11900	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA90_RS11905	COG1682	transport, permease protein
MUA90_RS11910	COG1134	teichoic acid transport
MUA90_RS11915	COG5609	conserved protein (DUF2294)
MUA90_RS11920	COG3949	Membrane
MUA90_RS11930	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUA90_RS11940	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
MUA90_RS11945	COG0110	maltose O-acetyltransferase activity
MUA90_RS11955	COG1247	-acetyltransferase
MUA90_RS11960	COG0671	phosphoesterase, PA-phosphatase related
MUA90_RS11965	COG1321	iron dependent repressor
MUA90_RS11970	COG1121	(ABC) transporter
MUA90_RS11975	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUA90_RS11980	COG0803	Belongs to the bacterial solute-binding protein 9 family
MUA90_RS11985	COG0025	NhaP-type Na H and K H
MUA90_RS12030	COG0546	phosphoglycolate phosphatase activity
MUA90_RS12040	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUA90_RS12045	COG0018	arginyl-trna synthetase
MUA90_RS12055	COG1473	amidohydrolase
MUA90_RS12065	COG1078	dGTPase activity
MUA90_RS12070	COG0519	Catalyzes the synthesis of GMP from XMP
MUA90_RS12085	COG4844	belongs to the
MUA90_RS12105	COG2826	transposase and inactivated derivatives, IS30 family
MUA90_RS12110	COG0095	Lipoate-protein ligase
MUA90_RS12115	COG0280	phosphate acetyltransferase
MUA90_RS12120	COG3253	May function as heme-dependent peroxidase
MUA90_RS12150	COG0586	Pfam SNARE associated Golgi protein
MUA90_RS12160	COG2363	Small membrane protein
MUA90_RS12170	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
MUA90_RS12180	COG1469	GTP cyclohydrolase I activity
MUA90_RS12185	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUA90_RS12190	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUA90_RS12195	COG0363	glucosamine-6-phosphate deaminase activity
MUA90_RS12200	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
MUA90_RS12210	COG0431	NADPH-dependent FMN reductase
MUA90_RS12215	COG0561	phosphatase activity
MUA90_RS12220	COG2801	Transposase and inactivated derivatives
MUA90_RS12235	COG1428	Deoxynucleoside kinase
MUA90_RS12240	COG1428	Deoxynucleoside kinase
MUA90_RS12245	COG0561	phosphatase activity
MUA90_RS12260	COG2832	Protein of unknown function (DUF454)
MUA90_RS12265	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUA90_RS12295	COG1473	amidohydrolase
MUA90_RS12300	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MUA90_RS12305	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MUA90_RS12310	COG0049	tRNA binding
MUA90_RS12315	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MUA90_RS12325	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MUA90_RS12330	COG0085	RNA polymerase activity
MUA90_RS12335	COG2813	Specifically methylates the guanine in position
MUA90_RS12340	COG0222	ribosome binding
MUA90_RS12345	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MUA90_RS12350	COG0081	regulation of translation
MUA90_RS12355	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MUA90_RS12360	COG0250	Participates in transcription elongation, termination and antitermination
MUA90_RS12365	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUA90_RS12370	COG0267	Belongs to the bacterial ribosomal protein bL33 family
MUA90_RS12385	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUA90_RS12390	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
MUA90_RS12395	COG0215	cysteine-tRNA ligase activity
MUA90_RS12400	COG1045	serine acetyltransferase
MUA90_RS12410	COG4956	integral membrane protein (PIN domain superfamily)
MUA90_RS12415	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MUA90_RS12420	COG0542	response to heat
MUA90_RS12425	COG3869	Catalyzes the specific phosphorylation of arginine residues in
MUA90_RS12430	COG3880	PFAM UvrB UvrC protein
MUA90_RS12440	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUA90_RS12480	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
MUA90_RS12485	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
MUA90_RS12490	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUA90_RS12500	COG2814	Major facilitator Superfamily
MUA90_RS12595	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
MUA90_RS12600	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MUA90_RS12605	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MUA90_RS12610	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
MUA90_RS12620	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUA90_RS12625	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
MUA90_RS12630	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MUA90_RS12645	COG1098	S1 RNA binding domain
MUA90_RS12655	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MUA90_RS12660	COG3956	TIGRFAM MazG family protein
MUA90_RS12665	COG2244	polysaccharide biosynthetic process
MUA90_RS12670	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MUA90_RS12675	COG0193	aminoacyl-tRNA hydrolase activity
MUA90_RS12680	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
MUA90_RS12685	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MUA90_RS12690	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
MUA90_RS12695	COG2088	sporulation resulting in formation of a cellular spore
MUA90_RS12700	COG0251	oxidation-reduction process
MUA90_RS12705	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA90_RS12715	COG4466	Protein conserved in bacteria
MUA90_RS12720	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MUA90_RS12725	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUA90_RS12730	COG0084	hydrolase, TatD family'
MUA90_RS12745	COG1121	(ABC) transporter
MUA90_RS12870	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MUA90_RS12875	COG2827	Endonuclease containing a URI domain
MUA90_RS12880	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
MUA90_RS12890	COG1774	PSP1 C-terminal conserved region
MUA90_RS12895	COG0470	DNA polymerase III
MUA90_RS12900	COG3870	Protein conserved in bacteria
MUA90_RS12905	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MUA90_RS12910	COG1982	Orn Lys Arg decarboxylase major
MUA90_RS12930	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MUA90_RS12940	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MUA90_RS12955	COG0583	DNA-binding transcription factor activity
MUA90_RS12980	COG2188	Transcriptional regulator
MUA90_RS12985	COG0366	Alpha amylase catalytic
MUA90_RS12990	COG1263	PTS System
MUA90_RS12990	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA90_RS12995	COG0346	lactoylglutathione lyase activity
MUA90_RS13000	COG0070	glutamate synthase
MUA90_RS13000	COG0069	glutamate synthase activity
MUA90_RS13000	COG0067	glutamate synthase
MUA90_RS13005	COG0583	DNA-binding transcription factor activity
MUA90_RS13030	COG2801	Transposase and inactivated derivatives
MUA90_RS13055	COG4841	protein insertion into membrane
MUA90_RS13070	COG2162	N-hydroxyarylamine O-acetyltransferase activity
MUA90_RS13080	COG0626	cystathionine gamma-synthase activity
MUA90_RS13085	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUA90_RS13095	COG0733	neurotransmitter:sodium symporter activity
MUA90_RS13105	COG1647	Serine aminopeptidase, S33
MUA90_RS13110	COG1755	Isoprenylcysteine carboxyl methyltransferase
MUA90_RS13125	COG0346	lactoylglutathione lyase activity
MUA90_RS13145	COG1695	Transcriptional regulator
MUA90_RS13150	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MUA90_RS13160	COG1683	Conserved Protein
MUA90_RS13180	COG0529	Catalyzes the synthesis of activated sulfate
MUA90_RS13185	COG2046	Belongs to the sulfate adenylyltransferase family
MUA90_RS13190	COG0730	response to heat
MUA90_RS13195	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MUA90_RS13200	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUA90_RS13205	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MUA90_RS13210	COG0175	sulfate reduction
MUA90_RS13215	COG1216	Glycosyl transferase, family 2
MUA90_RS13245	COG0519	Catalyzes the synthesis of GMP from XMP
MUA90_RS13245	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MUA90_RS13255	COG2233	PERMEase
MUA90_RS13260	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA90_RS13280	COG1823	symporter activity
MUA90_RS13285	COG0778	Nitroreductase
MUA90_RS13295	COG0450	alkyl hydroperoxide reductase
MUA90_RS13300	COG3634	alkyl hydroperoxide reductase activity
MUA90_RS13315	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MUA90_RS13320	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA90_RS13325	COG0588	phosphoglycerate mutase activity
MUA90_RS13335	COG1131	(ABC) transporter
MUA90_RS13355	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MUA90_RS13365	COG0360	Binds together with S18 to 16S ribosomal RNA
MUA90_RS13380	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA90_RS13400	COG0640	Transcriptional regulator
MUA90_RS13410	COG0012	GTP binding
MUA90_RS13415	COG4481	Protein conserved in bacteria
MUA90_RS13420	COG0668	transmembrane transport
MUA90_RS13425	COG1475	DNA binding
MUA90_RS13430	COG0626	cystathionine gamma-synthase activity
MUA90_RS13435	COG0646	methionine synthase
MUA90_RS13435	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MUA90_RS13440	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MUA90_RS13450	COG0436	Aminotransferase
MUA90_RS13470	COG1475	DNA binding
MUA90_RS13475	COG0357	Ribosomal RNA small subunit methyltransferase G
MUA90_RS13480	COG0445	tRNA wobble uridine modification
MUA90_RS13485	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
MUA90_RS13490	COG0594	ribonuclease P activity
MUA90_RS13505	COG1192	Involved in chromosome partitioning
MUA90_RS13570	COG1114	Component of the transport system for branched-chain amino acids
MUA90_RS13590	COG0577	efflux transmembrane transporter activity
MUA90_RS13600	COG3237	CsbD-like
MUA90_RS13620	COG1192	Involved in chromosome partitioning
MUA90_RS13660	COG2807	transmembrane transport
MUA90_RS13670	COG0753	catalase activity
MUA90_RS13705	COG1302	Protein conserved in bacteria
MUA90_RS13730	COG3237	CsbD-like
MUA90_RS13820	COG3237	CsbD-like