locus-tag class description ssp1_RS00005 PF00308 Bacterial dnaA protein ssp1_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ssp1_RS00005 PF11638 DnaA N-terminal domain ssp1_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ssp1_RS00010 PF02767 DNA polymerase III beta subunit, central domain ssp1_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ssp1_RS00020 PF02463 RecF/RecN/SMC N terminal domain ssp1_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS00025 PF00204 DNA gyrase B ssp1_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus ssp1_RS00025 PF01751 Toprim domain ssp1_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller ssp1_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A ssp1_RS00035 PF01256 Carbohydrate kinase ssp1_RS00040 PF00221 Aromatic amino acid lyase ssp1_RS00045 PF02403 Seryl-tRNA synthetase N-terminal domain ssp1_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ssp1_RS00050 PF03591 AzlC protein ssp1_RS00060 PF00561 alpha/beta hydrolase fold ssp1_RS00075 PF02272 DHHA1 domain ssp1_RS00075 PF01368 DHH family ssp1_RS00080 PF03948 Ribosomal protein L9, C-terminal domain ssp1_RS00080 PF01281 Ribosomal protein L9, N-terminal domain ssp1_RS00085 PF03796 DnaB-like helicase C terminal domain ssp1_RS00085 PF00772 DnaB-like helicase N terminal domain ssp1_RS00090 PF00709 Adenylosuccinate synthetase ssp1_RS00105 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS00105 PF00072 Response regulator receiver domain ssp1_RS00110 PF00672 HAMP domain ssp1_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS00110 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS00110 PF00989 PAS fold ssp1_RS00115 PF07435 YycH protein ssp1_RS00125 PF00753 Metallo-beta-lactamase superfamily ssp1_RS00130 PF02590 Predicted SPOUT methyltransferase ssp1_RS00140 PF00140 Sigma-70 factor, region 1.2 ssp1_RS00140 PF03979 Sigma-70 factor, region 1.1 ssp1_RS00140 PF04542 Sigma-70 region 2 ssp1_RS00140 PF04539 Sigma-70 region 3 ssp1_RS00140 PF04545 Sigma-70, region 4 ssp1_RS00150 PF00271 Helicase conserved C-terminal domain ssp1_RS00150 PF04851 Type III restriction enzyme, res subunit ssp1_RS00150 PF02151 UvrB/uvrC motif ssp1_RS00150 PF12344 Ultra-violet resistance protein B ssp1_RS00150 PF17757 UvrB interaction domain ssp1_RS00160 PF13476 AAA domain ssp1_RS00190 PF01207 Dihydrouridine synthase (Dus) ssp1_RS00200 PF06146 Phosphate-starvation-inducible E ssp1_RS00205 PF12102 Domain of unknown function (DUF3578) ssp1_RS00205 PF07728 AAA domain (dynein-related subfamily) ssp1_RS00210 PF10117 McrBC 5-methylcytosine restriction system component ssp1_RS00230 PF04650 YSIRK type signal peptide ssp1_RS00240 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ssp1_RS00245 PF03600 Citrate transporter ssp1_RS00250 PF02525 Flavodoxin-like fold ssp1_RS00255 PF07690 Major Facilitator Superfamily ssp1_RS00260 PF01546 Peptidase family M20/M25/M40 ssp1_RS00260 PF07687 Peptidase dimerisation domain ssp1_RS00265 PF01209 ubiE/COQ5 methyltransferase family ssp1_RS00290 PF04299 Putative FMN-binding domain ssp1_RS00295 PF00132 Bacterial transferase hexapeptide (six repeats) ssp1_RS00295 PF12464 Maltose acetyltransferase ssp1_RS00300 PF05525 Branched-chain amino acid transport protein ssp1_RS00305 PF00083 Sugar (and other) transporter ssp1_RS00310 PF03069 Acetamidase/Formamidase family ssp1_RS00320 PF00857 Isochorismatase family ssp1_RS00325 PF01037 Lrp/AsnC ligand binding domain ssp1_RS00330 PF06736 Protein of unknown function (DUF1211) ssp1_RS00345 PF01494 FAD binding domain ssp1_RS00350 PF00356 Bacterial regulatory proteins, lacI family ssp1_RS00355 PF06800 Sugar transport protein ssp1_RS00360 PF05025 RbsD / FucU transport protein family ssp1_RS00365 PF00294 pfkB family carbohydrate kinase ssp1_RS00380 PF07690 Major Facilitator Superfamily ssp1_RS00390 PF00440 Bacterial regulatory proteins, tetR family ssp1_RS00405 PF10100 Staphylopine dehydrogenase ssp1_RS00410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ssp1_RS00415 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS00420 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS00420 PF12911 N-terminal TM domain of oligopeptide transport permease C ssp1_RS00425 PF00005 ABC transporter ssp1_RS00430 PF00005 ABC transporter ssp1_RS00435 PF07690 Major Facilitator Superfamily ssp1_RS00450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ssp1_RS00455 PF18541 RuvC endonuclease subdomain 3 ssp1_RS00455 PF18070 CRISPR-Cas9 PI domain ssp1_RS00455 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 ssp1_RS00455 PF18061 CRISPR-Cas9 WED domain ssp1_RS00455 PF13395 HNH endonuclease ssp1_RS00460 PF01867 CRISPR associated protein Cas1 ssp1_RS00465 PF09827 CRISPR associated protein Cas2 ssp1_RS00485 PF00874 PRD domain ssp1_RS00485 PF08279 HTH domain ssp1_RS00485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS00485 PF05043 Mga helix-turn-helix domain ssp1_RS00490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS00490 PF02378 Phosphotransferase system, EIIC ssp1_RS00490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ssp1_RS00495 PF01238 Phosphomannose isomerase type I ssp1_RS00500 PF02096 60Kd inner membrane protein ssp1_RS00545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ssp1_RS00545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ssp1_RS00550 PF00027 Cyclic nucleotide-binding domain ssp1_RS00550 PF13545 Crp-like helix-turn-helix domain ssp1_RS00555 PF00696 Amino acid kinase family ssp1_RS00560 PF13520 Amino acid permease ssp1_RS00565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ssp1_RS00565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ssp1_RS00575 PF01316 Arginine repressor, DNA binding domain ssp1_RS00575 PF02863 Arginine repressor, C-terminal domain ssp1_RS00580 PF00916 Sulfate permease family ssp1_RS00580 PF01740 STAS domain ssp1_RS00600 PF07690 Major Facilitator Superfamily ssp1_RS00615 PF00534 Glycosyl transferases group 1 ssp1_RS00620 PF07516 SecA Wing and Scaffold domain ssp1_RS00620 PF01043 SecA preprotein cross-linking domain ssp1_RS00620 PF07517 SecA DEAD-like domain ssp1_RS00630 PF16929 Accessory Sec system GspB-transporter ssp1_RS00635 PF16993 Accessory Sec system protein Asp1 ssp1_RS00640 PF00344 SecY translocase ssp1_RS00645 PF00746 LPXTG cell wall anchor motif ssp1_RS00655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ssp1_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS00665 PF12911 N-terminal TM domain of oligopeptide transport permease C ssp1_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS00670 PF00005 ABC transporter ssp1_RS00675 PF00005 ABC transporter ssp1_RS00680 PF13411 MerR HTH family regulatory protein ssp1_RS00685 PF00248 Aldo/keto reductase family ssp1_RS00700 PF07681 DoxX ssp1_RS00705 PF07943 Penicillin-binding protein 5, C-terminal domain ssp1_RS00705 PF00768 D-alanyl-D-alanine carboxypeptidase ssp1_RS00710 PF13460 NAD(P)H-binding ssp1_RS00715 PF02557 D-alanyl-D-alanine carboxypeptidase ssp1_RS00720 PF01228 Glycine radical ssp1_RS00720 PF02901 Pyruvate formate lyase-like ssp1_RS00725 PF04055 Radical SAM superfamily ssp1_RS00735 PF03606 C4-dicarboxylate anaerobic carrier ssp1_RS00740 PF00483 Nucleotidyl transferase ssp1_RS00745 PF00535 Glycosyl transferase family 2 ssp1_RS00745 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ssp1_RS00760 PF00005 ABC transporter ssp1_RS00835 PF14449 Pre-toxin TG ssp1_RS00845 PF04634 Protein of unknown function, DUF600 ssp1_RS00850 PF00245 Alkaline phosphatase ssp1_RS00860 PF00857 Isochorismatase family ssp1_RS00885 PF00072 Response regulator receiver domain ssp1_RS00885 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS00890 PF00005 ABC transporter ssp1_RS00900 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS00915 PF00005 ABC transporter ssp1_RS00930 PF00106 short chain dehydrogenase ssp1_RS00935 PF03824 High-affinity nickel-transport protein ssp1_RS00940 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) ssp1_RS00945 PF00892 EamA-like transporter family ssp1_RS00950 PF00939 Sodium:sulfate symporter transmembrane region ssp1_RS00960 PF03551 Transcriptional regulator PadR-like family ssp1_RS00975 PF01470 Pyroglutamyl peptidase ssp1_RS00980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ssp1_RS00980 PF08279 HTH domain ssp1_RS00980 PF00874 PRD domain ssp1_RS00980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS00980 PF05043 Mga helix-turn-helix domain ssp1_RS00985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS00995 PF03611 PTS system sugar-specific permease component ssp1_RS01000 PF00581 Rhodanese-like domain ssp1_RS01000 PF12368 Rhodanase C-terminal ssp1_RS01000 PF17773 UPF0176 acylphosphatase like domain ssp1_RS01005 PF08450 SMP-30/Gluconolactonase/LRE-like region ssp1_RS01010 PF04264 YceI-like domain ssp1_RS01020 PF12697 Alpha/beta hydrolase family ssp1_RS01025 PF03606 C4-dicarboxylate anaerobic carrier ssp1_RS01030 PF17760 UvrA interaction domain ssp1_RS01030 PF17755 UvrA DNA-binding domain ssp1_RS01035 PF04650 YSIRK type signal peptide ssp1_RS01050 PF07690 Major Facilitator Superfamily ssp1_RS01055 PF00149 Calcineurin-like phosphoesterase ssp1_RS01055 PF02872 5'-nucleotidase, C-terminal domain ssp1_RS01070 PF00005 ABC transporter ssp1_RS01075 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS01080 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS01095 PF09023 Staphostatin B ssp1_RS01115 PF01625 Peptide methionine sulfoxide reductase ssp1_RS01115 PF01641 SelR domain ssp1_RS01135 PF01613 Flavin reductase like domain ssp1_RS01150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ssp1_RS01155 PF03176 MMPL family ssp1_RS01160 PF02566 OsmC-like protein ssp1_RS01165 PF01468 GA module ssp1_RS01170 PF05257 CHAP domain ssp1_RS01170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ssp1_RS01175 PF01061 ABC-2 type transporter ssp1_RS01185 PF01546 Peptidase family M20/M25/M40 ssp1_RS01185 PF07687 Peptidase dimerisation domain ssp1_RS01200 PF03413 Peptidase propeptide and YPEB domain ssp1_RS01200 PF01447 Thermolysin metallopeptidase, catalytic domain ssp1_RS01200 PF02868 Thermolysin metallopeptidase, alpha-helical domain ssp1_RS01200 PF07504 Fungalysin/Thermolysin Propeptide Motif ssp1_RS01205 PF09587 Bacterial capsule synthesis protein PGA_cap ssp1_RS01210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ssp1_RS01210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ssp1_RS01220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ssp1_RS01220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ssp1_RS01220 PF00205 Thiamine pyrophosphate enzyme, central domain ssp1_RS01240 PF00245 Alkaline phosphatase ssp1_RS01245 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS01245 PF00072 Response regulator receiver domain ssp1_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS01255 PF00005 ABC transporter ssp1_RS01285 PF01507 Phosphoadenosine phosphosulfate reductase family ssp1_RS01290 PF00667 FAD binding domain ssp1_RS01290 PF00175 Oxidoreductase NAD-binding domain ssp1_RS01290 PF00258 Flavodoxin ssp1_RS01295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ssp1_RS01295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ssp1_RS01300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ssp1_RS01305 PF14824 Sirohaem biosynthesis protein central ssp1_RS01310 PF01925 Sulfite exporter TauE/SafE ssp1_RS01315 PF01747 ATP-sulfurylase ssp1_RS01315 PF14306 PUA-like domain ssp1_RS01325 PF07687 Peptidase dimerisation domain ssp1_RS01325 PF01546 Peptidase family M20/M25/M40 ssp1_RS01330 PF05257 CHAP domain ssp1_RS01335 PF13597 Anaerobic ribonucleoside-triphosphate reductase ssp1_RS01335 PF03477 ATP cone domain ssp1_RS01345 PF03605 Anaerobic c4-dicarboxylate membrane transporter ssp1_RS01350 PF02028 BCCT, betaine/carnitine/choline family transporter ssp1_RS01360 PF00171 Aldehyde dehydrogenase family ssp1_RS01365 PF05199 GMC oxidoreductase ssp1_RS01365 PF00732 GMC oxidoreductase ssp1_RS01370 PF07687 Peptidase dimerisation domain ssp1_RS01370 PF01546 Peptidase family M20/M25/M40 ssp1_RS01375 PF07690 Major Facilitator Superfamily ssp1_RS01390 PF00501 AMP-binding enzyme ssp1_RS01390 PF13193 AMP-binding enzyme C-terminal domain ssp1_RS01395 PF02896 PEP-utilising enzyme, TIM barrel domain ssp1_RS01395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ssp1_RS01395 PF00391 PEP-utilising enzyme, mobile domain ssp1_RS01400 PF03618 Kinase/pyrophosphorylase ssp1_RS01405 PF06039 Malate:quinone oxidoreductase (Mqo) ssp1_RS01410 PF00232 Glycosyl hydrolase family 1 ssp1_RS01425 PF01494 FAD binding domain ssp1_RS01430 PF00274 Fructose-bisphosphate aldolase class-I ssp1_RS01440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ssp1_RS01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS01460 PF00202 Aminotransferase class-III ssp1_RS01465 PF13520 Amino acid permease ssp1_RS01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS01475 PF03466 LysR substrate binding domain ssp1_RS01480 PF00056 lactate/malate dehydrogenase, NAD binding domain ssp1_RS01480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ssp1_RS01485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ssp1_RS01485 PF00205 Thiamine pyrophosphate enzyme, central domain ssp1_RS01485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ssp1_RS01490 PF03306 Alpha-acetolactate decarboxylase ssp1_RS01495 PF02558 Ketopantoate reductase PanE/ApbA ssp1_RS01495 PF08546 Ketopantoate reductase PanE/ApbA C terminal ssp1_RS01505 PF02569 Pantoate-beta-alanine ligase ssp1_RS01510 PF02261 Aspartate decarboxylase ssp1_RS01550 PF02677 Epoxyqueuosine reductase QueH ssp1_RS01560 PF01180 Dihydroorotate dehydrogenase ssp1_RS01565 PF03881 Fructosamine kinase ssp1_RS01570 PF00561 alpha/beta hydrolase fold ssp1_RS01580 PF00106 short chain dehydrogenase ssp1_RS01585 PF00440 Bacterial regulatory proteins, tetR family ssp1_RS01605 PF05979 Bacterial protein of unknown function (DUF896) ssp1_RS01615 PF00324 Amino acid permease ssp1_RS01625 PF03976 Polyphosphate kinase 2 (PPK2) ssp1_RS01630 PF01464 Transglycosylase SLT domain ssp1_RS01635 PF01464 Transglycosylase SLT domain ssp1_RS01640 PF00182 Chitinase class I ssp1_RS01645 PF01757 Acyltransferase family ssp1_RS01650 PF05257 CHAP domain ssp1_RS01655 PF03816 Cell envelope-related transcriptional attenuator domain ssp1_RS01665 PF01593 Flavin containing amine oxidoreductase ssp1_RS01670 PF00155 Aminotransferase class I and II ssp1_RS01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ssp1_RS01680 PF00403 Heavy-metal-associated domain ssp1_RS01685 PF00403 Heavy-metal-associated domain ssp1_RS01700 PF00132 Bacterial transferase hexapeptide (six repeats) ssp1_RS01700 PF12464 Maltose acetyltransferase ssp1_RS01700 PF14602 Hexapeptide repeat of succinyl-transferase ssp1_RS01705 PF00171 Aldehyde dehydrogenase family ssp1_RS01715 PF07670 Nucleoside recognition ssp1_RS01715 PF17910 FeoB cytosolic helical domain ssp1_RS01715 PF07664 Ferrous iron transport protein B C terminus ssp1_RS01715 PF02421 Ferrous iron transport protein B ssp1_RS01735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ssp1_RS01735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ssp1_RS01740 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ssp1_RS01740 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ssp1_RS01745 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ssp1_RS01750 PF05257 CHAP domain ssp1_RS01750 PF01476 LysM domain ssp1_RS01760 PF03466 LysR substrate binding domain ssp1_RS01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS01765 PF03788 LrgA family ssp1_RS01770 PF04172 LrgB-like family ssp1_RS01775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ssp1_RS01775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ssp1_RS01775 PF00205 Thiamine pyrophosphate enzyme, central domain ssp1_RS01780 PF00367 phosphotransferase system, EIIB ssp1_RS01780 PF02378 Phosphotransferase system, EIIC ssp1_RS01780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ssp1_RS01795 PF00085 Thioredoxin ssp1_RS01800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ssp1_RS01800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ssp1_RS01805 PF07859 alpha/beta hydrolase fold ssp1_RS01815 PF08245 Mur ligase middle domain ssp1_RS01820 PF14102 Capsule biosynthesis CapC ssp1_RS01825 PF09587 Bacterial capsule synthesis protein PGA_cap ssp1_RS01845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ssp1_RS01845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ssp1_RS01855 PF01842 ACT domain ssp1_RS01855 PF03315 Serine dehydratase beta chain ssp1_RS01860 PF03313 Serine dehydratase alpha chain ssp1_RS01875 PF04203 Sortase domain ssp1_RS01885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ssp1_RS01885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS01890 PF00881 Nitroreductase family ssp1_RS01895 PF00171 Aldehyde dehydrogenase family ssp1_RS01915 PF05154 TM2 domain ssp1_RS01920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ssp1_RS01930 PF02567 Phenazine biosynthesis-like protein ssp1_RS01935 PF03466 LysR substrate binding domain ssp1_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS01940 PF00171 Aldehyde dehydrogenase family ssp1_RS01955 PF06874 Firmicute fructose-1,6-bisphosphatase ssp1_RS01960 PF09335 SNARE associated Golgi protein ssp1_RS01965 PF00899 ThiF family ssp1_RS01970 PF05690 Thiazole biosynthesis protein ThiG ssp1_RS01980 PF01266 FAD dependent oxidoreductase ssp1_RS01985 PF02581 Thiamine monophosphate synthase ssp1_RS01990 PF07690 Major Facilitator Superfamily ssp1_RS01995 PF03992 Antibiotic biosynthesis monooxygenase ssp1_RS02005 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) ssp1_RS02010 PF04607 Region found in RelA / SpoT proteins ssp1_RS02020 PF00392 Bacterial regulatory proteins, gntR family ssp1_RS02020 PF07729 FCD domain ssp1_RS02025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ssp1_RS02025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ssp1_RS02030 PF02447 GntP family permease ssp1_RS02035 PF00483 Nucleotidyl transferase ssp1_RS02045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ssp1_RS02045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ssp1_RS02045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ssp1_RS02045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ssp1_RS02050 PF00534 Glycosyl transferases group 1 ssp1_RS02050 PF09318 Glycosyl transferase 1 domain A ssp1_RS02055 PF00293 NUDIX domain ssp1_RS02060 PF08463 EcoEI R protein C-terminal ssp1_RS02060 PF04851 Type III restriction enzyme, res subunit ssp1_RS02060 PF00271 Helicase conserved C-terminal domain ssp1_RS02060 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ssp1_RS02065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ssp1_RS02065 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS02070 PF00676 Dehydrogenase E1 component ssp1_RS02075 PF02779 Transketolase, pyrimidine binding domain ssp1_RS02075 PF02780 Transketolase, C-terminal domain ssp1_RS02095 PF00106 short chain dehydrogenase ssp1_RS02100 PF07687 Peptidase dimerisation domain ssp1_RS02100 PF01546 Peptidase family M20/M25/M40 ssp1_RS02105 PF13089 Polyphosphate kinase N-terminal domain ssp1_RS02105 PF17941 Polyphosphate kinase C-terminal domain 1 ssp1_RS02105 PF13090 Polyphosphate kinase C-terminal domain 2 ssp1_RS02105 PF02503 Polyphosphate kinase middle domain ssp1_RS02110 PF02541 Ppx/GppA phosphatase family ssp1_RS02115 PF03806 AbgT putative transporter family ssp1_RS02125 PF05343 M42 glutamyl aminopeptidase ssp1_RS02130 PF06998 Protein of unknown function (DUF1307) ssp1_RS02135 PF01451 Low molecular weight phosphotyrosine protein phosphatase ssp1_RS02140 PF02040 Arsenical pump membrane protein ssp1_RS02145 PF01022 Bacterial regulatory protein, arsR family ssp1_RS02150 PF01645 Conserved region in glutamate synthase ssp1_RS02165 PF00005 ABC transporter ssp1_RS02170 PF03649 Uncharacterised protein family (UPF0014) ssp1_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS02175 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS02180 PF00072 Response regulator receiver domain ssp1_RS02180 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS02195 PF07690 Major Facilitator Superfamily ssp1_RS02200 PF00135 Carboxylesterase family ssp1_RS02205 PF13520 Amino acid permease ssp1_RS02210 PF08818 Domain of unknown function (DU1801) ssp1_RS02220 PF00005 ABC transporter ssp1_RS02220 PF00571 CBS domain ssp1_RS02225 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS02230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ssp1_RS02235 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS02240 PF04172 LrgB-like family ssp1_RS02245 PF03788 LrgA family ssp1_RS02250 PF07690 Major Facilitator Superfamily ssp1_RS02255 PF08546 Ketopantoate reductase PanE/ApbA C terminal ssp1_RS02255 PF02558 Ketopantoate reductase PanE/ApbA ssp1_RS02275 PF02096 60Kd inner membrane protein ssp1_RS02280 PF00144 Beta-lactamase ssp1_RS02285 PF13520 Amino acid permease ssp1_RS02290 PF00999 Sodium/hydrogen exchanger family ssp1_RS02295 PF00324 Amino acid permease ssp1_RS02300 PF00149 Calcineurin-like phosphoesterase ssp1_RS02315 PF07690 Major Facilitator Superfamily ssp1_RS02335 PF02595 Glycerate kinase family ssp1_RS02350 PF16916 Dimerisation domain of Zinc Transporter ssp1_RS02350 PF01545 Cation efflux family ssp1_RS02360 PF00300 Histidine phosphatase superfamily (branch 1) ssp1_RS02370 PF07690 Major Facilitator Superfamily ssp1_RS02375 PF00497 Bacterial extracellular solute-binding proteins, family 3 ssp1_RS02380 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS02385 PF00005 ABC transporter ssp1_RS02390 PF02388 FemAB family ssp1_RS02405 PF01297 Zinc-uptake complex component A periplasmic ssp1_RS02425 PF00583 Acetyltransferase (GNAT) family ssp1_RS02430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ssp1_RS02440 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS02440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ssp1_RS02440 PF18267 Rubredoxin NAD+ reductase C-terminal domain ssp1_RS02440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ssp1_RS02440 PF04324 BFD-like [2Fe-2S] binding domain ssp1_RS02445 PF00355 Rieske [2Fe-2S] domain ssp1_RS02450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ssp1_RS02455 PF14710 Respiratory nitrate reductase alpha N-terminal ssp1_RS02455 PF01568 Molydopterin dinucleotide binding domain ssp1_RS02455 PF00384 Molybdopterin oxidoreductase ssp1_RS02460 PF13247 4Fe-4S dicluster domain ssp1_RS02460 PF14711 Respiratory nitrate reductase beta C-terminal ssp1_RS02470 PF02665 Nitrate reductase gamma subunit ssp1_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS02480 PF07730 Histidine kinase ssp1_RS02485 PF00196 Bacterial regulatory proteins, luxR family ssp1_RS02485 PF00072 Response regulator receiver domain ssp1_RS02490 PF07690 Major Facilitator Superfamily ssp1_RS02495 PF00011 Hsp20/alpha crystallin family ssp1_RS02500 PF01047 MarR family ssp1_RS02505 PF00881 Nitroreductase family ssp1_RS02515 PF00375 Sodium:dicarboxylate symporter family ssp1_RS02540 PF00367 phosphotransferase system, EIIB ssp1_RS02540 PF02378 Phosphotransferase system, EIIC ssp1_RS02550 PF00440 Bacterial regulatory proteins, tetR family ssp1_RS02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS02570 PF03466 LysR substrate binding domain ssp1_RS02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS02615 PF00583 Acetyltransferase (GNAT) family ssp1_RS02620 PF00107 Zinc-binding dehydrogenase ssp1_RS02620 PF08240 Alcohol dehydrogenase GroES-like domain ssp1_RS02625 PF09375 Imelysin ssp1_RS02630 PF04261 Dyp-type peroxidase family ssp1_RS02630 PF10518 TAT (twin-arginine translocation) pathway signal sequence ssp1_RS02635 PF03239 Iron permease FTR1 family ssp1_RS02640 PF00902 Sec-independent protein translocase protein (TatC) ssp1_RS02645 PF02416 mttA/Hcf106 family ssp1_RS02655 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ssp1_RS02655 PF00535 Glycosyl transferase family 2 ssp1_RS02665 PF00535 Glycosyl transferase family 2 ssp1_RS02665 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ssp1_RS02670 PF02652 L-lactate permease ssp1_RS02675 PF00534 Glycosyl transferases group 1 ssp1_RS02675 PF13439 Glycosyltransferase Family 4 ssp1_RS02680 PF06039 Malate:quinone oxidoreductase (Mqo) ssp1_RS02690 PF04397 LytTr DNA-binding domain ssp1_RS02695 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS02695 PF00672 HAMP domain ssp1_RS02700 PF00072 Response regulator receiver domain ssp1_RS02700 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS02705 PF02687 FtsX-like permease family ssp1_RS02710 PF00005 ABC transporter ssp1_RS02720 PF12802 MarR family ssp1_RS02730 PF07690 Major Facilitator Superfamily ssp1_RS02745 PF07690 Major Facilitator Superfamily ssp1_RS02770 PF01544 CorA-like Mg2+ transporter protein ssp1_RS02775 PF01070 FMN-dependent dehydrogenase ssp1_RS02780 PF03616 Sodium/glutamate symporter ssp1_RS02785 PF03551 Transcriptional regulator PadR-like family ssp1_RS02800 PF02245 Methylpurine-DNA glycosylase (MPG) ssp1_RS02810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ssp1_RS02810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ssp1_RS02815 PF00005 ABC transporter ssp1_RS02815 PF13732 Domain of unknown function (DUF4162) ssp1_RS02825 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ssp1_RS02830 PF01263 Aldose 1-epimerase ssp1_RS02835 PF03475 3-alpha domain ssp1_RS02835 PF03473 MOSC domain ssp1_RS02840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ssp1_RS02845 PF02517 CPBP intramembrane metalloprotease ssp1_RS02850 PF00491 Arginase family ssp1_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS02855 PF03466 LysR substrate binding domain ssp1_RS02860 PF01175 Urocanase Rossmann-like domain ssp1_RS02860 PF17391 Urocanase N-terminal domain ssp1_RS02860 PF17392 Urocanase C-terminal domain ssp1_RS02865 PF01979 Amidohydrolase family ssp1_RS02870 PF01546 Peptidase family M20/M25/M40 ssp1_RS02870 PF07687 Peptidase dimerisation domain ssp1_RS02895 PF01418 Helix-turn-helix domain, rpiR family ssp1_RS02895 PF01380 SIS domain ssp1_RS02900 PF02378 Phosphotransferase system, EIIC ssp1_RS02900 PF00367 phosphotransferase system, EIIB ssp1_RS02910 PF01758 Sodium Bile acid symporter family ssp1_RS02915 PF13419 Haloacid dehalogenase-like hydrolase ssp1_RS02935 PF00324 Amino acid permease ssp1_RS02945 PF02378 Phosphotransferase system, EIIC ssp1_RS02945 PF00367 phosphotransferase system, EIIB ssp1_RS02950 PF01380 SIS domain ssp1_RS02965 PF02517 CPBP intramembrane metalloprotease ssp1_RS02970 PF08279 HTH domain ssp1_RS02970 PF13280 WYL domain ssp1_RS02980 PF03816 Cell envelope-related transcriptional attenuator domain ssp1_RS02985 PF00384 Molybdopterin oxidoreductase ssp1_RS02985 PF01568 Molydopterin dinucleotide binding domain ssp1_RS02985 PF12838 4Fe-4S dicluster domain ssp1_RS02985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ssp1_RS02985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ssp1_RS03000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ssp1_RS03000 PF13457 GW (Gly-Tryp) dipeptide domain ssp1_RS03005 PF01494 FAD binding domain ssp1_RS03010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS03010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ssp1_RS03015 PF00893 Small Multidrug Resistance protein ssp1_RS03020 PF00893 Small Multidrug Resistance protein ssp1_RS03025 PF05257 CHAP domain ssp1_RS03035 PF02558 Ketopantoate reductase PanE/ApbA ssp1_RS03035 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ssp1_RS03040 PF03553 Na+/H+ antiporter family ssp1_RS03045 PF05257 CHAP domain ssp1_RS03070 PF01774 UreD urease accessory protein ssp1_RS03075 PF02492 CobW/HypB/UreG, nucleotide-binding domain ssp1_RS03080 PF01730 UreF ssp1_RS03085 PF05194 UreE urease accessory protein, C-terminal domain ssp1_RS03085 PF02814 UreE urease accessory protein, N-terminal domain ssp1_RS03090 PF01979 Amidohydrolase family ssp1_RS03090 PF00449 Urease alpha-subunit, N-terminal domain ssp1_RS03095 PF00699 Urease beta subunit ssp1_RS03100 PF00547 Urease, gamma subunit ssp1_RS03105 PF03253 Urea transporter ssp1_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS03115 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS03120 PF00497 Bacterial extracellular solute-binding proteins, family 3 ssp1_RS03125 PF00005 ABC transporter ssp1_RS03130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ssp1_RS03130 PF02770 Acyl-CoA dehydrogenase, middle domain ssp1_RS03130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ssp1_RS03135 PF01497 Periplasmic binding protein ssp1_RS03145 PF02632 BioY family ssp1_RS03155 PF02634 FdhD/NarQ family ssp1_RS03165 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS03170 PF00005 ABC transporter ssp1_RS03170 PF03459 TOBE domain ssp1_RS03175 PF00899 ThiF family ssp1_RS03180 PF00994 Probable molybdopterin binding domain ssp1_RS03185 PF01967 MoaC family ssp1_RS03190 PF03453 MoeA N-terminal region (domain I and II) ssp1_RS03190 PF03454 MoeA C-terminal region (domain IV) ssp1_RS03190 PF00994 Probable molybdopterin binding domain ssp1_RS03195 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ssp1_RS03200 PF02391 MoaE protein ssp1_RS03205 PF02597 ThiS family ssp1_RS03210 PF12804 MobA-like NTP transferase domain ssp1_RS03215 PF06463 Molybdenum Cofactor Synthesis C ssp1_RS03215 PF04055 Radical SAM superfamily ssp1_RS03225 PF00083 Sugar (and other) transporter ssp1_RS03225 PF07690 Major Facilitator Superfamily ssp1_RS03230 PF01047 MarR family ssp1_RS03245 PF02388 FemAB family ssp1_RS03250 PF00873 AcrB/AcrD/AcrF family ssp1_RS03270 PF06800 Sugar transport protein ssp1_RS03280 PF01131 DNA topoisomerase ssp1_RS03280 PF01751 Toprim domain ssp1_RS03285 PF00860 Permease family ssp1_RS03295 PF00338 Ribosomal protein S10p/S20e ssp1_RS03300 PF00297 Ribosomal protein L3 ssp1_RS03305 PF00573 Ribosomal protein L4/L1 family ssp1_RS03310 PF00276 Ribosomal protein L23 ssp1_RS03315 PF03947 Ribosomal Proteins L2, C-terminal domain ssp1_RS03315 PF00181 Ribosomal Proteins L2, RNA binding domain ssp1_RS03320 PF00203 Ribosomal protein S19 ssp1_RS03325 PF00237 Ribosomal protein L22p/L17e ssp1_RS03330 PF00189 Ribosomal protein S3, C-terminal domain ssp1_RS03330 PF07650 KH domain ssp1_RS03335 PF00252 Ribosomal protein L16p/L10e ssp1_RS03340 PF00831 Ribosomal L29 protein ssp1_RS03345 PF00366 Ribosomal protein S17 ssp1_RS03350 PF00238 Ribosomal protein L14p/L23e ssp1_RS03355 PF00467 KOW motif ssp1_RS03355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ssp1_RS03360 PF00673 ribosomal L5P family C-terminus ssp1_RS03360 PF00281 Ribosomal protein L5 ssp1_RS03365 PF00253 Ribosomal protein S14p/S29e ssp1_RS03370 PF00410 Ribosomal protein S8 ssp1_RS03375 PF00347 Ribosomal protein L6 ssp1_RS03380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ssp1_RS03385 PF03719 Ribosomal protein S5, C-terminal domain ssp1_RS03385 PF00333 Ribosomal protein S5, N-terminal domain ssp1_RS03390 PF00327 Ribosomal protein L30p/L7e ssp1_RS03395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ssp1_RS03400 PF00344 SecY translocase ssp1_RS03405 PF05191 Adenylate kinase, active site lid ssp1_RS03410 PF01176 Translation initiation factor 1A / IF-1 ssp1_RS03415 PF00444 Ribosomal protein L36 ssp1_RS03420 PF00416 Ribosomal protein S13/S18 ssp1_RS03425 PF00411 Ribosomal protein S11 ssp1_RS03430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ssp1_RS03430 PF01000 RNA polymerase Rpb3/RpoA insert domain ssp1_RS03430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ssp1_RS03435 PF01196 Ribosomal protein L17 ssp1_RS03440 PF00005 ABC transporter ssp1_RS03445 PF00005 ABC transporter ssp1_RS03450 PF02361 Cobalt transport protein ssp1_RS03455 PF01416 tRNA pseudouridine synthase ssp1_RS03460 PF00572 Ribosomal protein L13 ssp1_RS03465 PF00380 Ribosomal protein S9/S16 ssp1_RS03475 PF13411 MerR HTH family regulatory protein ssp1_RS03480 PF02146 Sir2 family ssp1_RS03485 PF08220 DeoR-like helix-turn-helix domain ssp1_RS03485 PF00455 DeoR C terminal sensor domain ssp1_RS03490 PF02502 Ribose/Galactose Isomerase ssp1_RS03495 PF02502 Ribose/Galactose Isomerase ssp1_RS03500 PF00294 pfkB family carbohydrate kinase ssp1_RS03505 PF01791 DeoC/LacD family aldolase ssp1_RS03510 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ssp1_RS03515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ssp1_RS03515 PF02378 Phosphotransferase system, EIIC ssp1_RS03520 PF00232 Glycosyl hydrolase family 1 ssp1_RS03530 PF00296 Luciferase-like monooxygenase ssp1_RS03535 PF00107 Zinc-binding dehydrogenase ssp1_RS03535 PF16884 N-terminal domain of oxidoreductase ssp1_RS03540 PF08240 Alcohol dehydrogenase GroES-like domain ssp1_RS03540 PF00107 Zinc-binding dehydrogenase ssp1_RS03545 PF02028 BCCT, betaine/carnitine/choline family transporter ssp1_RS03560 PF03780 Asp23 family, cell envelope-related function ssp1_RS03565 PF04183 IucA / IucC family ssp1_RS03565 PF06276 Ferric iron reductase FhuF-like transporter ssp1_RS03570 PF05977 Transmembrane secretion effector ssp1_RS03575 PF04183 IucA / IucC family ssp1_RS03575 PF06276 Ferric iron reductase FhuF-like transporter ssp1_RS03580 PF01168 Alanine racemase, N-terminal domain ssp1_RS03585 PF01497 Periplasmic binding protein ssp1_RS03590 PF01032 FecCD transport family ssp1_RS03595 PF01032 FecCD transport family ssp1_RS03600 PF07670 Nucleoside recognition ssp1_RS03605 PF03992 Antibiotic biosynthesis monooxygenase ssp1_RS03615 PF04307 LexA-binding, inner membrane-associated putative hydrolase ssp1_RS03620 PF01704 UTP--glucose-1-phosphate uridylyltransferase ssp1_RS03625 PF03006 Haemolysin-III related ssp1_RS03630 PF07690 Major Facilitator Superfamily ssp1_RS03635 PF17080 Multidrug Resistance efflux pump ssp1_RS03640 PF07690 Major Facilitator Superfamily ssp1_RS03645 PF10609 NUBPL iron-transfer P-loop NTPase ssp1_RS03695 PF00491 Arginase family ssp1_RS03700 PF02457 DisA bacterial checkpoint controller nucleotide-binding ssp1_RS03710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ssp1_RS03710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ssp1_RS03710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ssp1_RS03710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ssp1_RS03715 PF08125 Mannitol dehydrogenase C-terminal domain ssp1_RS03715 PF01232 Mannitol dehydrogenase Rossmann domain ssp1_RS03720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS03725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ssp1_RS03725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS03725 PF05043 Mga helix-turn-helix domain ssp1_RS03725 PF00874 PRD domain ssp1_RS03725 PF08279 HTH domain ssp1_RS03730 PF02378 Phosphotransferase system, EIIC ssp1_RS03730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ssp1_RS03735 PF01380 SIS domain ssp1_RS03750 PF00149 Calcineurin-like phosphoesterase ssp1_RS03755 PF16916 Dimerisation domain of Zinc Transporter ssp1_RS03755 PF01545 Cation efflux family ssp1_RS03760 PF01022 Bacterial regulatory protein, arsR family ssp1_RS03765 PF13460 NAD(P)H-binding ssp1_RS03770 PF01238 Phosphomannose isomerase type I ssp1_RS03790 PF00210 Ferritin-like domain ssp1_RS03795 PF01048 Phosphorylase superfamily ssp1_RS03800 PF01791 DeoC/LacD family aldolase ssp1_RS03805 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ssp1_RS03805 PF00591 Glycosyl transferase family, a/b domain ssp1_RS03805 PF02885 Glycosyl transferase family, helical bundle domain ssp1_RS03810 PF01676 Metalloenzyme superfamily ssp1_RS03820 PF02664 S-Ribosylhomocysteinase (LuxS) ssp1_RS03840 PF03630 Fumble ssp1_RS03850 PF05066 HB1, ASXL, restriction endonuclease HTH domain ssp1_RS03855 PF00117 Glutamine amidotransferase class-I ssp1_RS03855 PF06418 CTP synthase N-terminus ssp1_RS03865 PF01116 Fructose-bisphosphate aldolase class-II ssp1_RS03870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ssp1_RS03880 PF00171 Aldehyde dehydrogenase family ssp1_RS03885 PF07497 Rho termination factor, RNA-binding domain ssp1_RS03885 PF07498 Rho termination factor, N-terminal domain ssp1_RS03885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ssp1_RS03890 PF01197 Ribosomal protein L31 ssp1_RS03895 PF00265 Thymidine kinase ssp1_RS03900 PF03462 PCRF domain ssp1_RS03900 PF00472 RF-1 domain ssp1_RS03905 PF17827 PrmC N-terminal domain ssp1_RS03905 PF05175 Methyltransferase small domain ssp1_RS03910 PF01300 Telomere recombination ssp1_RS03910 PF03481 Putative GTP-binding controlling metal-binding ssp1_RS03915 PF01451 Low molecular weight phosphotyrosine protein phosphatase ssp1_RS03920 PF04260 Protein of unknown function (DUF436) ssp1_RS03935 PF02350 UDP-N-acetylglucosamine 2-epimerase ssp1_RS03945 PF00119 ATP synthase A chain ssp1_RS03950 PF00137 ATP synthase subunit C ssp1_RS03955 PF00430 ATP synthase B/B' CF(0) ssp1_RS03960 PF00213 ATP synthase delta (OSCP) subunit ssp1_RS03965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ssp1_RS03965 PF02874 ATP synthase alpha/beta family, beta-barrel domain ssp1_RS03965 PF00306 ATP synthase alpha/beta chain, C terminal domain ssp1_RS03970 PF00231 ATP synthase ssp1_RS03975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ssp1_RS03975 PF02874 ATP synthase alpha/beta family, beta-barrel domain ssp1_RS03980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ssp1_RS03980 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ssp1_RS03990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ssp1_RS03995 PF07977 FabA-like domain ssp1_RS04005 PF00436 Single-strand binding protein family ssp1_RS04015 PF08543 Phosphomethylpyrimidine kinase ssp1_RS04020 PF02110 Hydroxyethylthiazole kinase family ssp1_RS04025 PF02581 Thiamine monophosphate synthase ssp1_RS04030 PF02096 60Kd inner membrane protein ssp1_RS04035 PF01966 HD domain ssp1_RS04040 PF13091 PLD-like domain ssp1_RS04040 PF13396 Phospholipase_D-nuclease N-terminal ssp1_RS04045 PF02583 Metal-sensitive transcriptional repressor ssp1_RS04060 PF01098 Cell cycle protein ssp1_RS04065 PF07478 D-ala D-ala ligase C-terminus ssp1_RS04065 PF01820 D-ala D-ala ligase N-terminus ssp1_RS04070 PF08245 Mur ligase middle domain ssp1_RS04070 PF01225 Mur ligase family, catalytic domain ssp1_RS04070 PF02875 Mur ligase family, glutamate ligase domain ssp1_RS04075 PF00270 DEAD/DEAH box helicase ssp1_RS04075 PF00271 Helicase conserved C-terminal domain ssp1_RS04085 PF03703 Bacterial PH domain ssp1_RS04090 PF03703 Bacterial PH domain ssp1_RS04095 PF01648 4'-phosphopantetheinyl transferase superfamily ssp1_RS04100 PF01168 Alanine racemase, N-terminal domain ssp1_RS04100 PF00842 Alanine racemase, C-terminal domain ssp1_RS04110 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ssp1_RS04120 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ssp1_RS04120 PF07228 Stage II sporulation protein E (SpoIIE) ssp1_RS04125 PF01740 STAS domain ssp1_RS04130 PF13581 Histidine kinase-like ATPase domain ssp1_RS04135 PF04539 Sigma-70 region 3 ssp1_RS04135 PF04545 Sigma-70, region 4 ssp1_RS04135 PF04542 Sigma-70 region 2 ssp1_RS04140 PF16921 Tex protein YqgF-like domain ssp1_RS04140 PF00575 S1 RNA binding domain ssp1_RS04140 PF17674 HHH domain ssp1_RS04140 PF09371 Tex-like protein N-terminal domain ssp1_RS04145 PF17283 SprT-like zinc ribbon domain ssp1_RS04145 PF10263 SprT-like family ssp1_RS04175 PF00291 Pyridoxal-phosphate dependent enzyme ssp1_RS04175 PF00585 C-terminal regulatory domain of Threonine dehydratase ssp1_RS04180 PF00694 Aconitase C-terminal domain ssp1_RS04185 PF00330 Aconitase family (aconitate hydratase) ssp1_RS04190 PF00180 Isocitrate/isopropylmalate dehydrogenase ssp1_RS04195 PF00682 HMGL-like ssp1_RS04195 PF08502 LeuA allosteric (dimerisation) domain ssp1_RS04200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ssp1_RS04200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ssp1_RS04210 PF00205 Thiamine pyrophosphate enzyme, central domain ssp1_RS04210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ssp1_RS04210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ssp1_RS04215 PF00920 Dehydratase family ssp1_RS04220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ssp1_RS04225 PF00814 Glycoprotease family ssp1_RS04230 PF00583 Acetyltransferase (GNAT) family ssp1_RS04235 PF00814 Glycoprotease family ssp1_RS04240 PF00488 MutS domain V ssp1_RS04240 PF05192 MutS domain III ssp1_RS04240 PF05188 MutS domain II ssp1_RS04240 PF01624 MutS domain I ssp1_RS04240 PF05190 MutS family domain IV ssp1_RS04245 PF12848 ABC transporter ssp1_RS04245 PF16326 ABC transporter C-terminal domain ssp1_RS04245 PF00005 ABC transporter ssp1_RS04250 PF06971 Putative DNA-binding protein N-terminus ssp1_RS04250 PF02629 CoA binding domain ssp1_RS04260 PF04143 Sulphur transport ssp1_RS04265 PF01206 Sulfurtransferase TusA ssp1_RS04270 PF13407 Periplasmic binding protein domain ssp1_RS04270 PF00356 Bacterial regulatory proteins, lacI family ssp1_RS04275 PF08244 Glycosyl hydrolases family 32 C terminal ssp1_RS04275 PF00251 Glycosyl hydrolases family 32 N-terminal domain ssp1_RS04280 PF00294 pfkB family carbohydrate kinase ssp1_RS04285 PF00072 Response regulator receiver domain ssp1_RS04285 PF04397 LytTr DNA-binding domain ssp1_RS04290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ssp1_RS04290 PF17203 Single cache domain 3 ssp1_RS04290 PF00989 PAS fold ssp1_RS04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS04300 PF04647 Accessory gene regulator B ssp1_RS04305 PF05372 Delta lysin family ssp1_RS04310 PF05372 Delta lysin family ssp1_RS04315 PF00795 Carbon-nitrogen hydrolase ssp1_RS04330 PF02517 CPBP intramembrane metalloprotease ssp1_RS04335 PF00166 Chaperonin 10 Kd subunit ssp1_RS04340 PF00118 TCP-1/cpn60 chaperonin family ssp1_RS04365 PF00392 Bacterial regulatory proteins, gntR family ssp1_RS04370 PF00005 ABC transporter ssp1_RS04380 PF00005 ABC transporter ssp1_RS04450 PF01022 Bacterial regulatory protein, arsR family ssp1_RS04470 PF10282 Lactonase, 7-bladed beta-propeller ssp1_RS04480 PF01368 DHH family ssp1_RS04480 PF02833 DHHA2 domain ssp1_RS04485 PF00857 Isochorismatase family ssp1_RS04495 PF00800 Prephenate dehydratase ssp1_RS04500 PF02898 Nitric oxide synthase, oxygenase domain ssp1_RS04505 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ssp1_RS04505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ssp1_RS04505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ssp1_RS04510 PF02540 NAD synthase ssp1_RS04515 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ssp1_RS04525 PF10397 Adenylosuccinate lyase C-terminus ssp1_RS04525 PF00206 Lyase ssp1_RS04530 PF01371 Trp repressor protein ssp1_RS04535 PF01884 PcrB family ssp1_RS04540 PF00580 UvrD/REP helicase N-terminal domain ssp1_RS04540 PF13361 UvrD-like helicase C-terminal domain ssp1_RS04545 PF00533 BRCA1 C Terminus (BRCT) domain ssp1_RS04545 PF12826 Helix-hairpin-helix motif ssp1_RS04545 PF03120 NAD-dependent DNA ligase OB-fold domain ssp1_RS04545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ssp1_RS04545 PF01653 NAD-dependent DNA ligase adenylation domain ssp1_RS04555 PF00474 Sodium:solute symporter family ssp1_RS04560 PF02686 Glu-tRNAGln amidotransferase C subunit ssp1_RS04565 PF01425 Amidase ssp1_RS04570 PF02934 GatB/GatE catalytic domain ssp1_RS04570 PF02637 GatB domain ssp1_RS04575 PF00781 Diacylglycerol kinase catalytic domain ssp1_RS04580 PF05958 tRNA (Uracil-5-)-methyltransferase ssp1_RS04590 PF11799 impB/mucB/samB family C-terminal domain ssp1_RS04590 PF00817 impB/mucB/samB family ssp1_RS04600 PF00210 Ferritin-like domain ssp1_RS04605 PF08245 Mur ligase middle domain ssp1_RS04605 PF08353 Domain of unknown function (DUF1727) ssp1_RS04610 PF07685 CobB/CobQ-like glutamine amidotransferase domain ssp1_RS04615 PF06081 Aromatic acid exporter family member 1 ssp1_RS04620 PF00557 Metallopeptidase family M24 ssp1_RS04635 PF07730 Histidine kinase ssp1_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS04640 PF00196 Bacterial regulatory proteins, luxR family ssp1_RS04640 PF00072 Response regulator receiver domain ssp1_RS04645 PF03631 Virulence factor BrkB ssp1_RS04655 PF01451 Low molecular weight phosphotyrosine protein phosphatase ssp1_RS04660 PF06569 Protein of unknown function (DUF1128) ssp1_RS04665 PF02073 Thermophilic metalloprotease (M29) ssp1_RS04675 PF04055 Radical SAM superfamily ssp1_RS04675 PF08756 YfkB-like domain ssp1_RS04685 PF01965 DJ-1/PfpI family ssp1_RS04690 PF00912 Transglycosylase ssp1_RS04695 PF02631 RecX family ssp1_RS04705 PF00005 ABC transporter ssp1_RS04705 PF01476 LysM domain ssp1_RS04715 PF04307 LexA-binding, inner membrane-associated putative hydrolase ssp1_RS04720 PF14815 NUDIX domain ssp1_RS04720 PF00730 HhH-GPD superfamily base excision DNA repair protein ssp1_RS04725 PF04167 Protein of unknown function (DUF402) ssp1_RS04730 PF00005 ABC transporter ssp1_RS04730 PF00664 ABC transporter transmembrane region ssp1_RS04735 PF06081 Aromatic acid exporter family member 1 ssp1_RS04740 PF00202 Aminotransferase class-III ssp1_RS04745 PF00578 AhpC/TSA family ssp1_RS04750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS04750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ssp1_RS04755 PF01475 Ferric uptake regulator family ssp1_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS04925 PF00005 ABC transporter ssp1_RS04930 PF08331 Domain of unknown function (DUF1730) ssp1_RS04935 PF00588 SpoU rRNA Methylase family ssp1_RS04940 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ssp1_RS04955 PF00206 Lyase ssp1_RS04955 PF10415 Fumarase C C-terminus ssp1_RS04960 PF01479 S4 domain ssp1_RS04960 PF00849 RNA pseudouridylate synthase ssp1_RS04965 PF07730 Histidine kinase ssp1_RS04965 PF13185 GAF domain ssp1_RS04970 PF00072 Response regulator receiver domain ssp1_RS04970 PF00196 Bacterial regulatory proteins, luxR family ssp1_RS04980 PF04286 Protein of unknown function (DUF445) ssp1_RS04985 PF06133 Control of competence regulator ComK, YlbF/YmcA ssp1_RS04990 PF00149 Calcineurin-like phosphoesterase ssp1_RS05000 PF01966 HD domain ssp1_RS05010 PF00639 PPIC-type PPIASE domain ssp1_RS05025 PF01230 HIT domain ssp1_RS05030 PF00005 ABC transporter ssp1_RS05035 PF05975 Bacterial ABC transporter protein EcsB ssp1_RS05045 PF01208 Uroporphyrinogen decarboxylase (URO-D) ssp1_RS05050 PF00762 Ferrochelatase ssp1_RS05055 PF01593 Flavin containing amine oxidoreductase ssp1_RS05060 PF06821 Serine hydrolase ssp1_RS05110 PF13193 AMP-binding enzyme C-terminal domain ssp1_RS05110 PF00501 AMP-binding enzyme ssp1_RS05120 PF01809 Putative membrane protein insertion efficiency factor ssp1_RS05125 PF00293 NUDIX domain ssp1_RS05130 PF00326 Prolyl oligopeptidase family ssp1_RS05135 PF01293 Phosphoenolpyruvate carboxykinase ssp1_RS05140 PF00438 S-adenosylmethionine synthetase, N-terminal domain ssp1_RS05140 PF02772 S-adenosylmethionine synthetase, central domain ssp1_RS05140 PF02773 S-adenosylmethionine synthetase, C-terminal domain ssp1_RS05150 PF00248 Aldo/keto reductase family ssp1_RS05155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ssp1_RS05160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ssp1_RS05170 PF00923 Transaldolase/Fructose-6-phosphate aldolase ssp1_RS05185 PF04542 Sigma-70 region 2 ssp1_RS05195 PF13457 GW (Gly-Tryp) dipeptide domain ssp1_RS05195 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ssp1_RS05205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ssp1_RS05205 PF01872 RibD C-terminal domain ssp1_RS05210 PF00677 Lumazine binding domain ssp1_RS05215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ssp1_RS05215 PF00925 GTP cyclohydrolase II ssp1_RS05220 PF00885 6,7-dimethyl-8-ribityllumazine synthase ssp1_RS05225 PF01619 Proline dehydrogenase ssp1_RS05230 PF12146 Serine aminopeptidase, S33 ssp1_RS05235 PF01047 MarR family ssp1_RS05240 PF06962 Putative rRNA methylase ssp1_RS05245 PF16199 Radical_SAM C-terminal domain ssp1_RS05245 PF04055 Radical SAM superfamily ssp1_RS05250 PF07690 Major Facilitator Superfamily ssp1_RS05255 PF08264 Anticodon-binding domain of tRNA ssp1_RS05255 PF00133 tRNA synthetases class I (I, L, M and V) ssp1_RS05255 PF13603 Leucyl-tRNA synthetase, Domain 2 ssp1_RS05255 PF09334 tRNA synthetases class I (M) ssp1_RS05260 PF00581 Rhodanese-like domain ssp1_RS05280 PF01943 Polysaccharide biosynthesis protein ssp1_RS05280 PF14667 Polysaccharide biosynthesis C-terminal domain ssp1_RS05285 PF00849 RNA pseudouridylate synthase ssp1_RS05285 PF01479 S4 domain ssp1_RS05295 PF01546 Peptidase family M20/M25/M40 ssp1_RS05300 PF01063 Amino-transferase class IV ssp1_RS05305 PF01636 Phosphotransferase enzyme family ssp1_RS05310 PF02390 Putative methyltransferase ssp1_RS05315 PF00753 Metallo-beta-lactamase superfamily ssp1_RS05325 PF05343 M42 glutamyl aminopeptidase ssp1_RS05330 PF00085 Thioredoxin ssp1_RS05335 PF07285 Protein of unknown function (DUF1444) ssp1_RS05340 PF01588 Putative tRNA binding domain ssp1_RS05340 PF14794 Domain of unknown function (DUF4479) ssp1_RS05345 PF17854 FtsK alpha domain ssp1_RS05345 PF01580 FtsK/SpoIIIE family ssp1_RS05345 PF09397 Ftsk gamma domain ssp1_RS05350 PF08245 Mur ligase middle domain ssp1_RS05350 PF02875 Mur ligase family, glutamate ligase domain ssp1_RS05350 PF01225 Mur ligase family, catalytic domain ssp1_RS05355 PF06103 Bacterial protein of unknown function (DUF948) ssp1_RS05365 PF00793 DAHP synthetase I family ssp1_RS05365 PF01817 Chorismate mutase type II ssp1_RS05370 PF00356 Bacterial regulatory proteins, lacI family ssp1_RS05375 PF00850 Histone deacetylase domain ssp1_RS05380 PF00583 Acetyltransferase (GNAT) family ssp1_RS05385 PF13193 AMP-binding enzyme C-terminal domain ssp1_RS05385 PF00501 AMP-binding enzyme ssp1_RS05390 PF01268 Formate--tetrahydrofolate ligase ssp1_RS05395 PF17092 Penicillin-binding protein OB-like domain ssp1_RS05395 PF00912 Transglycosylase ssp1_RS05395 PF00905 Penicillin binding protein transpeptidase domain ssp1_RS05400 PF00579 tRNA synthetases class I (W and Y) ssp1_RS05400 PF01479 S4 domain ssp1_RS05410 PF07690 Major Facilitator Superfamily ssp1_RS05415 PF13180 PDZ domain ssp1_RS05420 PF01553 Acyltransferase ssp1_RS05440 PF02378 Phosphotransferase system, EIIC ssp1_RS05440 PF00367 phosphotransferase system, EIIB ssp1_RS05450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ssp1_RS05450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS05450 PF01842 ACT domain ssp1_RS05455 PF00266 Aminotransferase class-V ssp1_RS05460 PF02566 OsmC-like protein ssp1_RS05465 PF03009 Glycerophosphoryl diester phosphodiesterase family ssp1_RS05470 PF00163 Ribosomal protein S4/S9 N-terminal domain ssp1_RS05470 PF01479 S4 domain ssp1_RS05480 PF13185 GAF domain ssp1_RS05485 PF06160 Septation ring formation regulator, EzrA ssp1_RS05490 PF00266 Aminotransferase class-V ssp1_RS05495 PF02926 THUMP domain ssp1_RS05495 PF02568 Thiamine biosynthesis protein (ThiI) ssp1_RS05500 PF01925 Sulfite exporter TauE/SafE ssp1_RS05505 PF08534 Redoxin ssp1_RS05510 PF02384 N-6 DNA Methylase ssp1_RS05515 PF00871 Acetokinase family ssp1_RS05520 PF00582 Universal stress protein family ssp1_RS05525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ssp1_RS05525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ssp1_RS05530 PF01321 Creatinase/Prolidase N-terminal domain ssp1_RS05530 PF00557 Metallopeptidase family M24 ssp1_RS05545 PF03061 Thioesterase superfamily ssp1_RS05545 PF00571 CBS domain ssp1_RS05545 PF00392 Bacterial regulatory proteins, gntR family ssp1_RS05545 PF07085 DRTGG domain ssp1_RS05550 PF01368 DHH family ssp1_RS05550 PF02272 DHHA1 domain ssp1_RS05555 PF14579 Helix-hairpin-helix motif ssp1_RS05555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ssp1_RS05555 PF07733 Bacterial DNA polymerase III alpha NTPase domain ssp1_RS05555 PF01336 OB-fold nucleic acid binding domain ssp1_RS05555 PF02811 PHP domain ssp1_RS05560 PF00390 Malic enzyme, N-terminal domain ssp1_RS05560 PF03949 Malic enzyme, NAD binding domain ssp1_RS05565 PF17848 Acetyl-coA carboxylase zinc finger domain ssp1_RS05565 PF01039 Carboxyl transferase domain ssp1_RS05570 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ssp1_RS05575 PF00365 Phosphofructokinase ssp1_RS05580 PF02887 Pyruvate kinase, alpha/beta domain ssp1_RS05580 PF00224 Pyruvate kinase, barrel domain ssp1_RS05580 PF00391 PEP-utilising enzyme, mobile domain ssp1_RS05585 PF00324 Amino acid permease ssp1_RS05590 PF00285 Citrate synthase, C-terminal domain ssp1_RS05595 PF00180 Isocitrate/isopropylmalate dehydrogenase ssp1_RS05600 PF00072 Response regulator receiver domain ssp1_RS05600 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS05605 PF16736 Single Cache-like ssp1_RS05605 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS05605 PF00989 PAS fold ssp1_RS05610 PF00476 DNA polymerase family A ssp1_RS05610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ssp1_RS05610 PF01367 5'-3' exonuclease, C-terminal SAM fold ssp1_RS05615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ssp1_RS05615 PF06827 Zinc finger found in FPG and IleRS ssp1_RS05615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ssp1_RS05620 PF01121 Dephospho-CoA kinase ssp1_RS05625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ssp1_RS05625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ssp1_RS05630 PF03477 ATP cone domain ssp1_RS05635 PF07261 Replication initiation and membrane attachment ssp1_RS05640 PF01695 IstB-like ATP binding protein ssp1_RS05640 PF07319 Primosomal protein DnaI N-terminus ssp1_RS05645 PF03129 Anticodon binding domain ssp1_RS05645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ssp1_RS05645 PF02824 TGS domain ssp1_RS05645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ssp1_RS05650 PF00324 Amino acid permease ssp1_RS05655 PF05198 Translation initiation factor IF-3, N-terminal domain ssp1_RS05655 PF00707 Translation initiation factor IF-3, C-terminal domain ssp1_RS05660 PF01632 Ribosomal protein L35 ssp1_RS05665 PF00453 Ribosomal protein L20 ssp1_RS05680 PF05697 Bacterial trigger factor protein (TF) ssp1_RS05680 PF05698 Bacterial trigger factor protein (TF) C-terminus ssp1_RS05680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ssp1_RS05685 PF06689 ClpX C4-type zinc finger ssp1_RS05685 PF07724 AAA domain (Cdc48 subfamily) ssp1_RS05685 PF10431 C-terminal, D2-small domain, of ClpB protein ssp1_RS05690 PF01926 50S ribosome-binding GTPase ssp1_RS05695 PF01488 Shikimate / quinate 5-dehydrogenase ssp1_RS05695 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ssp1_RS05695 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ssp1_RS05700 PF01578 Cytochrome C assembly protein ssp1_RS05705 PF03900 Porphobilinogen deaminase, C-terminal domain ssp1_RS05705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ssp1_RS05710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ssp1_RS05710 PF02602 Uroporphyrinogen-III synthase HemD ssp1_RS05715 PF00490 Delta-aminolevulinic acid dehydratase ssp1_RS05720 PF00202 Aminotransferase class-III ssp1_RS05735 PF08264 Anticodon-binding domain of tRNA ssp1_RS05735 PF00133 tRNA synthetases class I (I, L, M and V) ssp1_RS05735 PF10458 Valyl tRNA synthetase tRNA binding arm ssp1_RS05740 PF08245 Mur ligase middle domain ssp1_RS05740 PF02875 Mur ligase family, glutamate ligase domain ssp1_RS05750 PF04002 RadC-like JAB domain ssp1_RS05785 PF00829 Ribosomal prokaryotic L21 protein ssp1_RS05790 PF04327 Cysteine protease Prp ssp1_RS05795 PF01016 Ribosomal L27 protein ssp1_RS05800 PF01926 50S ribosome-binding GTPase ssp1_RS05800 PF01018 GTP1/OBG ssp1_RS05800 PF09269 Domain of unknown function (DUF1967) ssp1_RS05810 PF07499 RuvA, C-terminal domain ssp1_RS05810 PF01330 RuvA N terminal domain ssp1_RS05815 PF05496 Holliday junction DNA helicase RuvB P-loop domain ssp1_RS05815 PF17864 RuvB AAA lid domain ssp1_RS05815 PF05491 RuvB C-terminal winged helix domain ssp1_RS05820 PF02547 Queuosine biosynthesis protein ssp1_RS05825 PF01702 Queuine tRNA-ribosyltransferase ssp1_RS05830 PF02699 Preprotein translocase subunit ssp1_RS05835 PF02355 Protein export membrane protein ssp1_RS05835 PF07549 SecD/SecF GG Motif ssp1_RS05840 PF01368 DHH family ssp1_RS05840 PF17768 RecJ OB domain ssp1_RS05840 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ssp1_RS05840 PF02272 DHHA1 domain ssp1_RS05845 PF00156 Phosphoribosyl transferase domain ssp1_RS05850 PF02824 TGS domain ssp1_RS05850 PF04607 Region found in RelA / SpoT proteins ssp1_RS05850 PF13291 ACT domain ssp1_RS05855 PF02580 D-Tyr-tRNA(Tyr) deacylase ssp1_RS05860 PF01520 N-acetylmuramoyl-L-alanine amidase ssp1_RS05860 PF08239 Bacterial SH3 domain ssp1_RS05865 PF03129 Anticodon binding domain ssp1_RS05865 PF13393 Histidyl-tRNA synthetase ssp1_RS05870 PF00152 tRNA synthetases class II (D, K and N) ssp1_RS05870 PF01336 OB-fold nucleic acid binding domain ssp1_RS05870 PF02938 GAD domain ssp1_RS05880 PF00899 ThiF family ssp1_RS05885 PF16193 AAA C-terminal domain ssp1_RS05885 PF12002 MgsA AAA+ ATPase C terminal ssp1_RS05885 PF05496 Holliday junction DNA helicase RuvB P-loop domain ssp1_RS05890 PF02082 Transcriptional regulator ssp1_RS05900 PF00296 Luciferase-like monooxygenase ssp1_RS05905 PF00266 Aminotransferase class-V ssp1_RS05920 PF14490 Helix-hairpin-helix containing domain ssp1_RS05920 PF13538 UvrD-like helicase C-terminal domain ssp1_RS05920 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ssp1_RS05925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ssp1_RS05925 PF01411 tRNA synthetases class II (A) ssp1_RS05925 PF02272 DHHA1 domain ssp1_RS05930 PF06135 IreB regulatory phosphoprotein ssp1_RS05935 PF03652 Holliday junction resolvase ssp1_RS05940 PF06949 Protein of unknown function (DUF1292) ssp1_RS05945 PF01596 O-methyltransferase ssp1_RS05950 PF01136 Peptidase family U32 ssp1_RS05955 PF01136 Peptidase family U32 ssp1_RS05955 PF16325 Peptidase family U32 C-terminal domain ssp1_RS05960 PF00485 Phosphoribulokinase / Uridine kinase family ssp1_RS05965 PF01272 Transcription elongation factor, GreA/GreB, C-term ssp1_RS05965 PF03449 Transcription elongation factor, N-terminal ssp1_RS05970 PF02682 Carboxyltransferase domain, subdomain C and D ssp1_RS05980 PF00364 Biotin-requiring enzyme ssp1_RS05985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ssp1_RS05985 PF00289 Biotin carboxylase, N-terminal domain ssp1_RS05985 PF02785 Biotin carboxylase C-terminal domain ssp1_RS05990 PF03746 LamB/YcsF family ssp1_RS05995 PF01566 Natural resistance-associated macrophage protein ssp1_RS06000 PF01048 Phosphorylase superfamily ssp1_RS06010 PF01926 50S ribosome-binding GTPase ssp1_RS06015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ssp1_RS06015 PF08501 Shikimate dehydrogenase substrate binding domain ssp1_RS06015 PF01488 Shikimate / quinate 5-dehydrogenase ssp1_RS06020 PF01985 CRS1 / YhbY (CRM) domain ssp1_RS06025 PF01467 Cytidylyltransferase-like ssp1_RS06030 PF01966 HD domain ssp1_RS06040 PF13649 Methyltransferase domain ssp1_RS06050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ssp1_RS06055 PF03772 Competence protein ssp1_RS06055 PF00753 Metallo-beta-lactamase superfamily ssp1_RS06055 PF13567 Domain of unknown function (DUF4131) ssp1_RS06060 PF06144 DNA polymerase III, delta subunit ssp1_RS06065 PF01649 Ribosomal protein S20 ssp1_RS06070 PF00679 Elongation factor G C-terminus ssp1_RS06070 PF06421 GTP-binding protein LepA C-terminus ssp1_RS06070 PF00009 Elongation factor Tu GTP binding domain ssp1_RS06070 PF14492 Elongation Factor G, domain II ssp1_RS06070 PF03144 Elongation factor Tu domain 2 ssp1_RS06075 PF06969 HemN C-terminal domain ssp1_RS06075 PF04055 Radical SAM superfamily ssp1_RS06080 PF01628 HrcA protein C terminal domain ssp1_RS06085 PF01025 GrpE ssp1_RS06090 PF00012 Hsp70 protein ssp1_RS06095 PF00684 DnaJ central domain ssp1_RS06095 PF00226 DnaJ domain ssp1_RS06095 PF01556 DnaJ C terminal domain ssp1_RS06105 PF04452 RNA methyltransferase ssp1_RS06110 PF00919 Uncharacterized protein family UPF0004 ssp1_RS06110 PF01938 TRAM domain ssp1_RS06110 PF04055 Radical SAM superfamily ssp1_RS06115 PF01165 Ribosomal protein S21 ssp1_RS06120 PF01957 NfeD-like C-terminal, partner-binding ssp1_RS06120 PF01972 Serine dehydrogenase proteinase ssp1_RS06125 PF12127 SigmaW regulon antibacterial ssp1_RS06135 PF02562 PhoH-like protein ssp1_RS06140 PF02130 Uncharacterized protein family UPF0054 ssp1_RS06145 PF01219 Prokaryotic diacylglycerol kinase ssp1_RS06150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ssp1_RS06155 PF07650 KH domain ssp1_RS06155 PF01926 50S ribosome-binding GTPase ssp1_RS06160 PF11967 Recombination protein O N terminal ssp1_RS06160 PF02565 Recombination protein O C terminal ssp1_RS06165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ssp1_RS06165 PF03129 Anticodon binding domain ssp1_RS06170 PF08279 HTH domain ssp1_RS06170 PF00571 CBS domain ssp1_RS06175 PF03618 Kinase/pyrophosphorylase ssp1_RS06180 PF00772 DnaB-like helicase N terminal domain ssp1_RS06180 PF08275 DNA primase catalytic core, N-terminal domain ssp1_RS06180 PF01807 CHC2 zinc finger ssp1_RS06185 PF04545 Sigma-70, region 4 ssp1_RS06185 PF04542 Sigma-70 region 2 ssp1_RS06185 PF00140 Sigma-70 factor, region 1.2 ssp1_RS06185 PF03979 Sigma-70 factor, region 1.1 ssp1_RS06185 PF04539 Sigma-70 region 3 ssp1_RS06190 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ssp1_RS06195 PF01784 NIF3 (NGG1p interacting factor 3) ssp1_RS06200 PF00271 Helicase conserved C-terminal domain ssp1_RS06200 PF00270 DEAD/DEAH box helicase ssp1_RS06205 PF01261 Xylose isomerase-like TIM barrel ssp1_RS06210 PF00005 ABC transporter ssp1_RS06215 PF00950 ABC 3 transport family ssp1_RS06220 PF01475 Ferric uptake regulator family ssp1_RS06225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ssp1_RS06225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ssp1_RS06230 PF00905 Penicillin binding protein transpeptidase domain ssp1_RS06230 PF03717 Penicillin-binding Protein dimerisation domain ssp1_RS06235 PF00471 Ribosomal protein L33 ssp1_RS06240 PF01812 5-formyltetrahydrofolate cyclo-ligase family ssp1_RS06250 PF06014 Bacterial protein of unknown function (DUF910) ssp1_RS06255 PF00480 ROK family ssp1_RS06260 PF01910 Thiamine-binding protein ssp1_RS06265 PF00753 Metallo-beta-lactamase superfamily ssp1_RS06270 PF00437 Type II/IV secretion system protein ssp1_RS06275 PF00482 Type II secretion system (T2SS), protein F ssp1_RS06280 PF07963 Prokaryotic N-terminal methylation motif ssp1_RS06300 PF01202 Shikimate kinase ssp1_RS06305 PF01571 Aminomethyltransferase folate-binding domain ssp1_RS06305 PF08669 Glycine cleavage T-protein C-terminal barrel domain ssp1_RS06310 PF02347 Glycine cleavage system P-protein ssp1_RS06315 PF00266 Aminotransferase class-V ssp1_RS06320 PF00581 Rhodanese-like domain ssp1_RS06325 PF03099 Biotin/lipoate A/B protein ligase family ssp1_RS06340 PF00557 Metallopeptidase family M24 ssp1_RS06340 PF01321 Creatinase/Prolidase N-terminal domain ssp1_RS06345 PF08207 Elongation factor P (EF-P) KOW-like domain ssp1_RS06345 PF01132 Elongation factor P (EF-P) OB domain ssp1_RS06345 PF09285 Elongation factor P, C-terminal ssp1_RS06350 PF01118 Semialdehyde dehydrogenase, NAD binding domain ssp1_RS06350 PF02774 Semialdehyde dehydrogenase, dimerisation domain ssp1_RS06355 PF01960 ArgJ family ssp1_RS06360 PF00696 Amino acid kinase family ssp1_RS06370 PF00364 Biotin-requiring enzyme ssp1_RS06375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ssp1_RS06375 PF00289 Biotin carboxylase, N-terminal domain ssp1_RS06375 PF02785 Biotin carboxylase C-terminal domain ssp1_RS06380 PF03780 Asp23 family, cell envelope-related function ssp1_RS06385 PF01029 NusB family ssp1_RS06390 PF02601 Exonuclease VII, large subunit ssp1_RS06390 PF13742 OB-fold nucleic acid binding domain ssp1_RS06395 PF02609 Exonuclease VII small subunit ssp1_RS06400 PF00348 Polyprenyl synthetase ssp1_RS06405 PF02863 Arginine repressor, C-terminal domain ssp1_RS06405 PF01316 Arginine repressor, DNA binding domain ssp1_RS06410 PF13476 AAA domain ssp1_RS06415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ssp1_RS06415 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS06420 PF00676 Dehydrogenase E1 component ssp1_RS06425 PF02780 Transketolase, C-terminal domain ssp1_RS06425 PF02779 Transketolase, pyrimidine binding domain ssp1_RS06430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ssp1_RS06430 PF00364 Biotin-requiring enzyme ssp1_RS06430 PF02817 e3 binding domain ssp1_RS06435 PF06491 Disulphide isomerase ssp1_RS06440 PF11728 Putative aromatic acid exporter C-terminal domain ssp1_RS06440 PF06081 Aromatic acid exporter family member 1 ssp1_RS06445 PF07687 Peptidase dimerisation domain ssp1_RS06445 PF01546 Peptidase family M20/M25/M40 ssp1_RS06450 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ssp1_RS06450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ssp1_RS06455 PF00128 Alpha amylase, catalytic domain ssp1_RS06455 PF16657 Maltogenic Amylase, C-terminal domain ssp1_RS06465 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ssp1_RS06465 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ssp1_RS06470 PF12706 Beta-lactamase superfamily domain ssp1_RS06475 PF03807 NADP oxidoreductase coenzyme F420-dependent ssp1_RS06475 PF14748 Pyrroline-5-carboxylate reductase dimerisation ssp1_RS06480 PF00106 short chain dehydrogenase ssp1_RS06485 PF00248 Aldo/keto reductase family ssp1_RS06490 PF00293 NUDIX domain ssp1_RS06495 PF01475 Ferric uptake regulator family ssp1_RS06500 PF02899 Phage integrase, N-terminal SAM-like domain ssp1_RS06500 PF00589 Phage integrase family ssp1_RS06510 PF02616 Segregation and condensation protein ScpA ssp1_RS06515 PF04079 Segregation and condensation complex subunit ScpB ssp1_RS06520 PF00849 RNA pseudouridylate synthase ssp1_RS06520 PF01479 S4 domain ssp1_RS06525 PF00072 Response regulator receiver domain ssp1_RS06525 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS06530 PF18698 Histidine kinase sensor domain ssp1_RS06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS06530 PF00672 HAMP domain ssp1_RS06530 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS06535 PF12822 ECF transporter, substrate-specific component ssp1_RS06550 PF00271 Helicase conserved C-terminal domain ssp1_RS06550 PF00270 DEAD/DEAH box helicase ssp1_RS06555 PF01476 LysM domain ssp1_RS06565 PF17763 Glutaminase/Asparaginase C-terminal domain ssp1_RS06565 PF00710 Asparaginase, N-terminal ssp1_RS06570 PF02224 Cytidylate kinase ssp1_RS06575 PF00575 S1 RNA binding domain ssp1_RS06580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ssp1_RS06580 PF01926 50S ribosome-binding GTPase ssp1_RS06585 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ssp1_RS06585 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ssp1_RS06590 PF00216 Bacterial DNA-binding protein ssp1_RS06600 PF01209 ubiE/COQ5 methyltransferase family ssp1_RS06605 PF00348 Polyprenyl synthetase ssp1_RS06610 PF00334 Nucleoside diphosphate kinase ssp1_RS06615 PF01264 Chorismate synthase ssp1_RS06620 PF01761 3-dehydroquinate synthase ssp1_RS06625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ssp1_RS06635 PF08864 UPF0302 domain ssp1_RS06635 PF08858 IDEAL domain ssp1_RS06640 PF07187 Protein of unknown function (DUF1405) ssp1_RS06645 PF04298 Putative neutral zinc metallopeptidase ssp1_RS06650 PF03819 MazG nucleotide pyrophosphohydrolase domain ssp1_RS06655 PF13439 Glycosyltransferase Family 4 ssp1_RS06655 PF00534 Glycosyl transferases group 1 ssp1_RS06660 PF13735 tRNA nucleotidyltransferase domain 2 putative ssp1_RS06660 PF12627 Probable RNA and SrmB- binding site of polymerase A ssp1_RS06660 PF01743 Poly A polymerase head domain ssp1_RS06665 PF08279 HTH domain ssp1_RS06665 PF03099 Biotin/lipoate A/B protein ligase family ssp1_RS06665 PF02237 Biotin protein ligase C terminal domain ssp1_RS06670 PF04851 Type III restriction enzyme, res subunit ssp1_RS06670 PF13307 Helicase C-terminal domain ssp1_RS06670 PF00929 Exonuclease ssp1_RS06675 PF00152 tRNA synthetases class II (D, K and N) ssp1_RS06675 PF01336 OB-fold nucleic acid binding domain ssp1_RS06680 PF07261 Replication initiation and membrane attachment ssp1_RS06685 PF00730 HhH-GPD superfamily base excision DNA repair protein ssp1_RS06685 PF00633 Helix-hairpin-helix motif ssp1_RS06685 PF10576 Iron-sulfur binding domain of endonuclease III ssp1_RS06695 PF00912 Transglycosylase ssp1_RS06695 PF00905 Penicillin binding protein transpeptidase domain ssp1_RS06700 PF03838 Recombination protein U ssp1_RS06710 PF06908 YspA SLOG family ssp1_RS06715 PF05103 DivIVA protein ssp1_RS06725 PF01170 Putative RNA methylase family UPF0020 ssp1_RS06725 PF02926 THUMP domain ssp1_RS06740 PF01367 5'-3' exonuclease, C-terminal SAM fold ssp1_RS06740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ssp1_RS06745 PF04650 YSIRK type signal peptide ssp1_RS06745 PF01468 GA module ssp1_RS06745 PF07564 Domain of Unknown Function (DUF1542) ssp1_RS06755 PF02592 Putative vitamin uptake transporter ssp1_RS06765 PF13769 Virulence factor ssp1_RS06765 PF08712 Scaffold protein Nfu/NifU N terminal ssp1_RS06770 PF13769 Virulence factor ssp1_RS06770 PF08712 Scaffold protein Nfu/NifU N terminal ssp1_RS06775 PF06491 Disulphide isomerase ssp1_RS06780 PF00303 Thymidylate synthase ssp1_RS06785 PF00186 Dihydrofolate reductase ssp1_RS06790 PF02645 Uncharacterised protein, DegV family COG1307 ssp1_RS06795 PF01625 Peptide methionine sulfoxide reductase ssp1_RS06800 PF01641 SelR domain ssp1_RS06805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ssp1_RS06810 PF06855 YozE SAM-like fold ssp1_RS06815 PF17820 PDZ domain ssp1_RS06815 PF03572 Peptidase family S41 ssp1_RS06815 PF01471 Putative peptidoglycan binding domain ssp1_RS06825 PF04101 Glycosyltransferase family 28 C-terminal domain ssp1_RS06825 PF03033 Glycosyltransferase family 28 N-terminal domain ssp1_RS06830 PF01569 PAP2 superfamily ssp1_RS06835 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS06835 PF00072 Response regulator receiver domain ssp1_RS06840 PF00512 His Kinase A (phospho-acceptor) domain ssp1_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS06840 PF18719 ArlS sensor domain ssp1_RS06845 PF02779 Transketolase, pyrimidine binding domain ssp1_RS06845 PF00676 Dehydrogenase E1 component ssp1_RS06845 PF16870 2-oxoglutarate dehydrogenase C-terminal ssp1_RS06850 PF02817 e3 binding domain ssp1_RS06850 PF00364 Biotin-requiring enzyme ssp1_RS06850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ssp1_RS06870 PF07728 AAA domain (dynein-related subfamily) ssp1_RS06870 PF08406 CbbQ/NirQ/NorQ C-terminal ssp1_RS06875 PF00092 von Willebrand factor type A domain ssp1_RS06880 PF05525 Branched-chain amino acid transport protein ssp1_RS06885 PF05816 Toxic anion resistance protein (TelA) ssp1_RS06895 PF00708 Acylphosphatase ssp1_RS06905 PF00313 'Cold-shock' DNA-binding domain ssp1_RS06910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ssp1_RS06910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ssp1_RS06915 PF00842 Alanine racemase, C-terminal domain ssp1_RS06915 PF01168 Alanine racemase, N-terminal domain ssp1_RS06920 PF01546 Peptidase family M20/M25/M40 ssp1_RS06925 PF00132 Bacterial transferase hexapeptide (six repeats) ssp1_RS06925 PF14602 Hexapeptide repeat of succinyl-transferase ssp1_RS06925 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ssp1_RS06930 PF01113 Dihydrodipicolinate reductase, N-terminus ssp1_RS06930 PF05173 Dihydrodipicolinate reductase, C-terminus ssp1_RS06935 PF00701 Dihydrodipicolinate synthetase family ssp1_RS06940 PF01118 Semialdehyde dehydrogenase, NAD binding domain ssp1_RS06940 PF02774 Semialdehyde dehydrogenase, dimerisation domain ssp1_RS06945 PF00696 Amino acid kinase family ssp1_RS06945 PF13840 ACT domain ssp1_RS06945 PF01842 ACT domain ssp1_RS06950 PF12848 ABC transporter ssp1_RS06950 PF00005 ABC transporter ssp1_RS06955 PF17783 CvfB-like winged helix domain ssp1_RS06955 PF13509 S1 domain ssp1_RS06960 PF12849 PBP superfamily domain ssp1_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS06975 PF00005 ABC transporter ssp1_RS06980 PF01895 PhoU domain ssp1_RS06995 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS07000 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS07005 PF00005 ABC transporter ssp1_RS07010 PF00005 ABC transporter ssp1_RS07015 PF01497 Periplasmic binding protein ssp1_RS07025 PF02388 FemAB family ssp1_RS07030 PF02388 FemAB family ssp1_RS07035 PF00290 Tryptophan synthase alpha chain ssp1_RS07040 PF00291 Pyridoxal-phosphate dependent enzyme ssp1_RS07045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ssp1_RS07050 PF00218 Indole-3-glycerol phosphate synthase ssp1_RS07055 PF00591 Glycosyl transferase family, a/b domain ssp1_RS07060 PF00117 Glutamine amidotransferase class-I ssp1_RS07065 PF04715 Anthranilate synthase component I, N terminal region ssp1_RS07065 PF00425 chorismate binding enzyme ssp1_RS07070 PF05343 M42 glutamyl aminopeptidase ssp1_RS07075 PF01842 ACT domain ssp1_RS07075 PF02153 Prephenate dehydrogenase ssp1_RS07080 PF11799 impB/mucB/samB family C-terminal domain ssp1_RS07080 PF00817 impB/mucB/samB family ssp1_RS07080 PF11798 IMS family HHH motif ssp1_RS07085 PF01361 Tautomerase enzyme ssp1_RS07090 PF03816 Cell envelope-related transcriptional attenuator domain ssp1_RS07095 PF01625 Peptide methionine sulfoxide reductase ssp1_RS07100 PF09924 Uncharacterised conserved protein (DUF2156) ssp1_RS07100 PF03706 Lysylphosphatidylglycerol synthase TM region ssp1_RS07105 PF01594 AI-2E family transporter ssp1_RS07110 PF00874 PRD domain ssp1_RS07110 PF03123 CAT RNA binding domain ssp1_RS07115 PF01235 Sodium:alanine symporter family ssp1_RS07120 PF00521 DNA gyrase/topoisomerase IV, subunit A ssp1_RS07120 PF03989 DNA gyrase C-terminal domain, beta-propeller ssp1_RS07125 PF01751 Toprim domain ssp1_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS07125 PF00204 DNA gyrase B ssp1_RS07125 PF00986 DNA gyrase B subunit, carboxyl terminus ssp1_RS07130 PF02660 Glycerol-3-phosphate acyltransferase ssp1_RS07140 PF03061 Thioesterase superfamily ssp1_RS07145 PF00694 Aconitase C-terminal domain ssp1_RS07145 PF00330 Aconitase family (aconitate hydratase) ssp1_RS07150 PF02028 BCCT, betaine/carnitine/choline family transporter ssp1_RS07155 PF01741 Large-conductance mechanosensitive channel, MscL ssp1_RS07160 PF13476 AAA domain ssp1_RS07165 PF00149 Calcineurin-like phosphoesterase ssp1_RS07165 PF12320 Type 5 capsule protein repressor C-terminal domain ssp1_RS07170 PF07301 Protein of unknown function (DUF1453) ssp1_RS07180 PF03672 Uncharacterised protein family (UPF0154) ssp1_RS07185 PF00456 Transketolase, thiamine diphosphate binding domain ssp1_RS07185 PF02780 Transketolase, C-terminal domain ssp1_RS07185 PF02779 Transketolase, pyrimidine binding domain ssp1_RS07190 PF05979 Bacterial protein of unknown function (DUF896) ssp1_RS07200 PF00717 Peptidase S24-like ssp1_RS07200 PF01726 LexA DNA binding domain ssp1_RS07210 PF00478 IMP dehydrogenase / GMP reductase domain ssp1_RS07215 PF00253 Ribosomal protein S14p/S29e ssp1_RS07220 PF00471 Ribosomal protein L33 ssp1_RS07225 PF06628 Catalase-related immune-responsive ssp1_RS07225 PF00199 Catalase ssp1_RS07230 PF00324 Amino acid permease ssp1_RS07245 PF00288 GHMP kinases N terminal domain ssp1_RS07245 PF08544 GHMP kinases C terminal ssp1_RS07250 PF00291 Pyridoxal-phosphate dependent enzyme ssp1_RS07255 PF01842 ACT domain ssp1_RS07255 PF00742 Homoserine dehydrogenase ssp1_RS07255 PF03447 Homoserine dehydrogenase, NAD binding domain ssp1_RS07260 PF13840 ACT domain ssp1_RS07260 PF00696 Amino acid kinase family ssp1_RS07275 PF00565 Staphylococcal nuclease homologue ssp1_RS07285 PF00072 Response regulator receiver domain ssp1_RS07285 PF00196 Bacterial regulatory proteins, luxR family ssp1_RS07290 PF07730 Histidine kinase ssp1_RS07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS07300 PF00005 ABC transporter ssp1_RS07305 PF13091 PLD-like domain ssp1_RS07305 PF13396 Phospholipase_D-nuclease N-terminal ssp1_RS07355 PF03951 Glutamine synthetase, beta-Grasp domain ssp1_RS07355 PF00120 Glutamine synthetase, catalytic domain ssp1_RS07360 PF13411 MerR HTH family regulatory protein ssp1_RS07365 PF06838 Methionine gamma-lyase ssp1_RS07370 PF01926 50S ribosome-binding GTPase ssp1_RS07370 PF13167 GTP-binding GTPase N-terminal ssp1_RS07370 PF16360 GTP-binding GTPase Middle Region ssp1_RS07375 PF00255 Glutathione peroxidase ssp1_RS07380 PF17209 Hfq protein ssp1_RS07390 PF00561 alpha/beta hydrolase fold ssp1_RS07395 PF01266 FAD dependent oxidoreductase ssp1_RS07395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ssp1_RS07400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ssp1_RS07400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ssp1_RS07405 PF00230 Major intrinsic protein ssp1_RS07410 PF04309 Glycerol-3-phosphate responsive antiterminator ssp1_RS07415 PF08676 MutL C terminal dimerisation domain ssp1_RS07415 PF01119 DNA mismatch repair protein, C-terminal domain ssp1_RS07420 PF01624 MutS domain I ssp1_RS07420 PF00488 MutS domain V ssp1_RS07420 PF05190 MutS family domain IV ssp1_RS07420 PF05192 MutS domain III ssp1_RS07420 PF05188 MutS domain II ssp1_RS07430 PF06133 Control of competence regulator ComK, YlbF/YmcA ssp1_RS07435 PF01938 TRAM domain ssp1_RS07435 PF04055 Radical SAM superfamily ssp1_RS07435 PF00919 Uncharacterized protein family UPF0004 ssp1_RS07440 PF01910 Thiamine-binding protein ssp1_RS07445 PF05908 Poly-gamma-glutamate hydrolase ssp1_RS07450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ssp1_RS07455 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ssp1_RS07455 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ssp1_RS07455 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ssp1_RS07460 PF13277 YmdB-like protein ssp1_RS07470 PF12072 Domain of unknown function (DUF3552) ssp1_RS07470 PF01966 HD domain ssp1_RS07470 PF00013 KH domain ssp1_RS07475 PF00154 recA bacterial DNA recombination protein ssp1_RS07480 PF00994 Probable molybdopterin binding domain ssp1_RS07480 PF02464 Competence-damaged protein ssp1_RS07480 PF18146 Damage-inducible protein CinA KH domain ssp1_RS07485 PF01066 CDP-alcohol phosphatidyltransferase ssp1_RS07490 PF13464 Domain of unknown function (DUF4115) ssp1_RS07495 PF11868 Protein of unknown function (DUF3388) ssp1_RS07505 PF00675 Insulinase (Peptidase family M16) ssp1_RS07505 PF05193 Peptidase M16 inactive domain ssp1_RS07510 PF05193 Peptidase M16 inactive domain ssp1_RS07515 PF07702 UTRA domain ssp1_RS07515 PF00392 Bacterial regulatory proteins, gntR family ssp1_RS07520 PF01580 FtsK/SpoIIIE family ssp1_RS07520 PF09397 Ftsk gamma domain ssp1_RS07520 PF17854 FtsK alpha domain ssp1_RS07525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ssp1_RS07525 PF00753 Metallo-beta-lactamase superfamily ssp1_RS07525 PF17770 Ribonuclease J C-terminal domain ssp1_RS07535 PF00575 S1 RNA binding domain ssp1_RS07535 PF01138 3' exoribonuclease family, domain 1 ssp1_RS07535 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ssp1_RS07535 PF00013 KH domain ssp1_RS07535 PF03725 3' exoribonuclease family, domain 2 ssp1_RS07540 PF00312 Ribosomal protein S15 ssp1_RS07545 PF01687 Riboflavin kinase ssp1_RS07545 PF06574 FAD synthetase ssp1_RS07550 PF01509 TruB family pseudouridylate synthase (N terminal domain) ssp1_RS07550 PF16198 tRNA pseudouridylate synthase B C-terminal domain ssp1_RS07555 PF02033 Ribosome-binding factor A ssp1_RS07560 PF00009 Elongation factor Tu GTP binding domain ssp1_RS07560 PF11987 Translation-initiation factor 2 ssp1_RS07560 PF04760 Translation initiation factor IF-2, N-terminal region ssp1_RS07565 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ssp1_RS07570 PF04296 Protein of unknown function (DUF448) ssp1_RS07575 PF00575 S1 RNA binding domain ssp1_RS07575 PF13184 NusA-like KH domain ssp1_RS07575 PF08529 NusA N-terminal domain ssp1_RS07580 PF02576 RimP N-terminal domain ssp1_RS07580 PF17384 RimP C-terminal SH3 domain ssp1_RS07585 PF00929 Exonuclease ssp1_RS07585 PF02811 PHP domain ssp1_RS07585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ssp1_RS07585 PF14579 Helix-hairpin-helix motif ssp1_RS07585 PF11490 DNA polymerase III polC-type N-terminus II ssp1_RS07585 PF14480 DNA polymerase III polC-type N-terminus I ssp1_RS07585 PF07733 Bacterial DNA polymerase III alpha NTPase domain ssp1_RS07590 PF03129 Anticodon binding domain ssp1_RS07590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ssp1_RS07590 PF04073 Aminoacyl-tRNA editing domain ssp1_RS07595 PF02163 Peptidase family M50 ssp1_RS07595 PF13180 PDZ domain ssp1_RS07605 PF01255 Putative undecaprenyl diphosphate synthase ssp1_RS07610 PF01765 Ribosome recycling factor ssp1_RS07615 PF00696 Amino acid kinase family ssp1_RS07620 PF00889 Elongation factor TS ssp1_RS07625 PF00318 Ribosomal protein S2 ssp1_RS07630 PF06018 CodY GAF-like domain ssp1_RS07630 PF08222 CodY helix-turn-helix domain ssp1_RS07635 PF10431 C-terminal, D2-small domain, of ClpB protein ssp1_RS07635 PF07724 AAA domain (Cdc48 subfamily) ssp1_RS07635 PF00004 ATPase family associated with various cellular activities (AAA) ssp1_RS07640 PF00227 Proteasome subunit ssp1_RS07645 PF00589 Phage integrase family ssp1_RS07645 PF02899 Phage integrase, N-terminal SAM-like domain ssp1_RS07650 PF01134 Glucose inhibited division protein A ssp1_RS07655 PF01396 Topoisomerase DNA binding C4 zinc finger ssp1_RS07655 PF01131 DNA topoisomerase ssp1_RS07655 PF01751 Toprim domain ssp1_RS07660 PF02481 DNA recombination-mediator protein A ssp1_RS07665 PF02629 CoA binding domain ssp1_RS07665 PF00549 CoA-ligase ssp1_RS07670 PF08442 ATP-grasp domain ssp1_RS07670 PF00549 CoA-ligase ssp1_RS07675 PF01351 Ribonuclease HII ssp1_RS07680 PF01926 50S ribosome-binding GTPase ssp1_RS07685 PF09586 Bacterial membrane protein YfhO ssp1_RS07695 PF01245 Ribosomal protein L19 ssp1_RS07700 PF01746 tRNA (Guanine-1)-methyltransferase ssp1_RS07705 PF01782 RimM N-terminal domain ssp1_RS07705 PF05239 PRC-barrel domain ssp1_RS07710 PF00886 Ribosomal protein S16 ssp1_RS07715 PF02978 Signal peptide binding domain ssp1_RS07715 PF02881 SRP54-type protein, helical bundle domain ssp1_RS07715 PF00448 SRP54-type protein, GTPase domain ssp1_RS07720 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ssp1_RS07725 PF00448 SRP54-type protein, GTPase domain ssp1_RS07725 PF02881 SRP54-type protein, helical bundle domain ssp1_RS07730 PF02463 RecF/RecN/SMC N terminal domain ssp1_RS07730 PF06470 SMC proteins Flexible Hinge Domain ssp1_RS07735 PF14622 Ribonuclease-III-like ssp1_RS07735 PF00035 Double-stranded RNA binding motif ssp1_RS07740 PF00550 Phosphopantetheine attachment site ssp1_RS07755 PF00698 Acyl transferase domain ssp1_RS07760 PF02504 Fatty acid synthesis protein ssp1_RS07765 PF01575 MaoC like domain ssp1_RS07770 PF00270 DEAD/DEAH box helicase ssp1_RS07770 PF00271 Helicase conserved C-terminal domain ssp1_RS07770 PF17191 RecG wedge domain ssp1_RS07775 PF13684 Dihydroxyacetone kinase family ssp1_RS07775 PF02734 DAK2 domain ssp1_RS07780 PF03780 Asp23 family, cell envelope-related function ssp1_RS07785 PF00830 Ribosomal L28 family ssp1_RS07795 PF00834 Ribulose-phosphate 3 epimerase family ssp1_RS07800 PF16745 RsgA N-terminal domain ssp1_RS07800 PF03193 RsgA GTPase ssp1_RS07805 PF03793 PASTA domain ssp1_RS07805 PF00069 Protein kinase domain ssp1_RS07815 PF04055 Radical SAM superfamily ssp1_RS07820 PF01029 NusB family ssp1_RS07820 PF01189 16S rRNA methyltransferase RsmB/F ssp1_RS07825 PF00551 Formyl transferase ssp1_RS07825 PF02911 Formyl transferase, C-terminal domain ssp1_RS07830 PF01327 Polypeptide deformylase ssp1_RS07840 PF00271 Helicase conserved C-terminal domain ssp1_RS07840 PF04851 Type III restriction enzyme, res subunit ssp1_RS07840 PF18074 Primosomal protein N C-terminal domain ssp1_RS07840 PF17764 3′ DNA-binding domain (3′BD) ssp1_RS07840 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ssp1_RS07845 PF02441 Flavoprotein ssp1_RS07845 PF04127 DNA / pantothenate metabolism flavoprotein ssp1_RS07850 PF01192 RNA polymerase Rpb6 ssp1_RS07855 PF00625 Guanylate kinase ssp1_RS07860 PF05670 NFACT protein RNA binding domain ssp1_RS07875 PF00156 Phosphoribosyl transferase domain ssp1_RS07880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ssp1_RS07885 PF02142 MGS-like domain ssp1_RS07885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ssp1_RS07885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ssp1_RS07890 PF00117 Glutamine amidotransferase class-I ssp1_RS07890 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ssp1_RS07895 PF01979 Amidohydrolase family ssp1_RS07900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ssp1_RS07900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ssp1_RS07905 PF00860 Permease family ssp1_RS07910 PF00156 Phosphoribosyl transferase domain ssp1_RS07920 PF01479 S4 domain ssp1_RS07920 PF00849 RNA pseudouridylate synthase ssp1_RS07925 PF01252 Signal peptidase (SPase) II ssp1_RS07930 PF01476 LysM domain ssp1_RS07930 PF05257 CHAP domain ssp1_RS07940 PF00133 tRNA synthetases class I (I, L, M and V) ssp1_RS07940 PF08264 Anticodon-binding domain of tRNA ssp1_RS07940 PF06827 Zinc finger found in FPG and IleRS ssp1_RS07945 PF05103 DivIVA protein ssp1_RS07955 PF02325 YGGT family ssp1_RS07960 PF04472 Cell division protein SepF ssp1_RS07965 PF01168 Alanine racemase, N-terminal domain ssp1_RS07970 PF02578 Multi-copper polyphenol oxidoreductase laccase ssp1_RS07975 PF00091 Tubulin/FtsZ family, GTPase domain ssp1_RS07975 PF12327 FtsZ family, C-terminal domain ssp1_RS07980 PF02491 SHS2 domain inserted in FTSA ssp1_RS07985 PF08478 POTRA domain, FtsQ-type ssp1_RS07985 PF03799 Cell division protein FtsQ ssp1_RS07990 PF08245 Mur ligase middle domain ssp1_RS07990 PF02875 Mur ligase family, glutamate ligase domain ssp1_RS07995 PF00953 Glycosyl transferase family 4 ssp1_RS08000 PF03717 Penicillin-binding Protein dimerisation domain ssp1_RS08000 PF00905 Penicillin binding protein transpeptidase domain ssp1_RS08000 PF03793 PASTA domain ssp1_RS08005 PF04977 Septum formation initiator ssp1_RS08010 PF01795 MraW methylase family ssp1_RS08015 PF02381 MraZ protein, putative antitoxin-like ssp1_RS08020 PF10079 Bacillithiol biosynthesis BshC ssp1_RS08035 PF05480 Staphylococcus haemolytic protein ssp1_RS08040 PF05480 Staphylococcus haemolytic protein ssp1_RS08045 PF05480 Staphylococcus haemolytic protein ssp1_RS08050 PF05480 Staphylococcus haemolytic protein ssp1_RS08065 PF01725 Ham1 family ssp1_RS08070 PF01177 Asp/Glu/Hydantoin racemase ssp1_RS08075 PF13183 4Fe-4S dicluster domain ssp1_RS08075 PF13085 2Fe-2S iron-sulfur cluster binding domain ssp1_RS08080 PF00890 FAD binding domain ssp1_RS08080 PF02910 Fumarate reductase flavoprotein C-term ssp1_RS08085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ssp1_RS08090 PF08459 UvrC Helix-hairpin-helix N-terminal ssp1_RS08090 PF02151 UvrB/uvrC motif ssp1_RS08090 PF01541 GIY-YIG catalytic domain ssp1_RS08095 PF00085 Thioredoxin ssp1_RS08100 PF00488 MutS domain V ssp1_RS08100 PF01713 Smr domain ssp1_RS08105 PF14716 Helix-hairpin-helix domain ssp1_RS08105 PF14791 DNA polymerase beta thumb ssp1_RS08105 PF02811 PHP domain ssp1_RS08115 PF05164 Cell division protein ZapA ssp1_RS08120 PF01351 Ribonuclease HII ssp1_RS08120 PF11858 Domain of unknown function (DUF3378) ssp1_RS08125 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ssp1_RS08125 PF01588 Putative tRNA binding domain ssp1_RS08125 PF03147 Ferredoxin-fold anticodon binding domain ssp1_RS08125 PF03484 tRNA synthetase B5 domain ssp1_RS08125 PF03483 B3/4 domain ssp1_RS08130 PF01409 tRNA synthetases class II core domain (F) ssp1_RS08130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ssp1_RS08135 PF00588 SpoU rRNA Methylase family ssp1_RS08135 PF08032 RNA 2'-O ribose methyltransferase substrate binding ssp1_RS08140 PF01783 Ribosomal L32p protein family ssp1_RS08150 PF05636 HIGH Nucleotidyl Transferase ssp1_RS08155 PF01467 Cytidylyltransferase-like ssp1_RS08170 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ssp1_RS08175 PF03009 Glycerophosphoryl diester phosphodiesterase family ssp1_RS08180 PF06133 Control of competence regulator ComK, YlbF/YmcA ssp1_RS08195 PF01040 UbiA prenyltransferase family ssp1_RS08200 PF02628 Cytochrome oxidase assembly protein ssp1_RS08205 PF00289 Biotin carboxylase, N-terminal domain ssp1_RS08205 PF02785 Biotin carboxylase C-terminal domain ssp1_RS08205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ssp1_RS08205 PF00682 HMGL-like ssp1_RS08205 PF02436 Conserved carboxylase domain ssp1_RS08205 PF00364 Biotin-requiring enzyme ssp1_RS08210 PF01098 Cell cycle protein ssp1_RS08215 PF07408 Protein of unknown function (DUF1507) ssp1_RS08225 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) ssp1_RS08230 PF00009 Elongation factor Tu GTP binding domain ssp1_RS08230 PF03144 Elongation factor Tu domain 2 ssp1_RS08230 PF00679 Elongation factor G C-terminus ssp1_RS08230 PF14492 Elongation Factor G, domain II ssp1_RS08240 PF00459 Inositol monophosphatase family ssp1_RS08245 PF06335 Protein of unknown function (DUF1054) ssp1_RS08250 PF01566 Natural resistance-associated macrophage protein ssp1_RS08265 PF13416 Bacterial extracellular solute-binding protein ssp1_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS08275 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS08280 PF00005 ABC transporter ssp1_RS08280 PF08402 TOBE domain ssp1_RS08290 PF05256 Uncharacterised protein family (UPF0223) ssp1_RS08295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ssp1_RS08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS08300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ssp1_RS08300 PF02817 e3 binding domain ssp1_RS08300 PF00364 Biotin-requiring enzyme ssp1_RS08305 PF02779 Transketolase, pyrimidine binding domain ssp1_RS08305 PF02780 Transketolase, C-terminal domain ssp1_RS08310 PF00676 Dehydrogenase E1 component ssp1_RS08320 PF01327 Polypeptide deformylase ssp1_RS08325 PF07288 Protein of unknown function (DUF1447) ssp1_RS08330 PF17770 Ribonuclease J C-terminal domain ssp1_RS08330 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ssp1_RS08330 PF00753 Metallo-beta-lactamase superfamily ssp1_RS08335 PF02080 TrkA-C domain ssp1_RS08335 PF02254 TrkA-N domain ssp1_RS08340 PF02322 Cytochrome bd terminal oxidase subunit II ssp1_RS08345 PF01654 Cytochrome bd terminal oxidase subunit I ssp1_RS08355 PF02896 PEP-utilising enzyme, TIM barrel domain ssp1_RS08355 PF00391 PEP-utilising enzyme, mobile domain ssp1_RS08355 PF05524 PEP-utilising enzyme, N-terminal ssp1_RS08360 PF00381 PTS HPr component phosphorylation site ssp1_RS08370 PF10672 S-adenosylmethionine-dependent methyltransferase ssp1_RS08370 PF17785 PUA-like domain ssp1_RS08390 PF00005 ABC transporter ssp1_RS08395 PF02361 Cobalt transport protein ssp1_RS08400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ssp1_RS08400 PF02844 Phosphoribosylglycinamide synthetase, N domain ssp1_RS08400 PF02843 Phosphoribosylglycinamide synthetase, C domain ssp1_RS08405 PF01808 AICARFT/IMPCHase bienzyme ssp1_RS08405 PF02142 MGS-like domain ssp1_RS08410 PF00551 Formyl transferase ssp1_RS08415 PF02769 AIR synthase related protein, C-terminal domain ssp1_RS08415 PF00586 AIR synthase related protein, N-terminal domain ssp1_RS08420 PF00156 Phosphoribosyl transferase domain ssp1_RS08420 PF13537 Glutamine amidotransferase domain ssp1_RS08425 PF02769 AIR synthase related protein, C-terminal domain ssp1_RS08425 PF00586 AIR synthase related protein, N-terminal domain ssp1_RS08425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ssp1_RS08435 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ssp1_RS08440 PF01259 SAICAR synthetase ssp1_RS08445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ssp1_RS08445 PF02222 ATP-grasp domain ssp1_RS08445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS08450 PF00731 AIR carboxylase ssp1_RS08455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ssp1_RS08455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ssp1_RS08460 PF00175 Oxidoreductase NAD-binding domain ssp1_RS08460 PF00970 Oxidoreductase FAD-binding domain ssp1_RS08460 PF00042 Globin ssp1_RS08470 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ssp1_RS08475 PF00115 Cytochrome C and Quinol oxidase polypeptide I ssp1_RS08480 PF00510 Cytochrome c oxidase subunit III ssp1_RS08485 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ssp1_RS08490 PF01156 Inosine-uridine preferring nucleoside hydrolase ssp1_RS08495 PF00144 Beta-lactamase ssp1_RS08500 PF03816 Cell envelope-related transcriptional attenuator domain ssp1_RS08505 PF10804 Protein of unknown function (DUF2538) ssp1_RS08510 PF13673 Acetyltransferase (GNAT) domain ssp1_RS08515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ssp1_RS08515 PF13457 GW (Gly-Tryp) dipeptide domain ssp1_RS08525 PF01757 Acyltransferase family ssp1_RS08530 PF00155 Aminotransferase class I and II ssp1_RS08535 PF00378 Enoyl-CoA hydratase/isomerase ssp1_RS08540 PF12697 Alpha/beta hydrolase family ssp1_RS08545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ssp1_RS08545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ssp1_RS08545 PF16582 Middle domain of thiamine pyrophosphate ssp1_RS08550 PF00425 chorismate binding enzyme ssp1_RS08555 PF01040 UbiA prenyltransferase family ssp1_RS08565 PF05154 TM2 domain ssp1_RS08595 PF10437 Bacterial lipoate protein ligase C-terminus ssp1_RS08595 PF03099 Biotin/lipoate A/B protein ligase family ssp1_RS08600 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) ssp1_RS08615 PF02386 Cation transport protein ssp1_RS08620 PF13180 PDZ domain ssp1_RS08625 PF03741 Integral membrane protein TerC family ssp1_RS08630 PF00009 Elongation factor Tu GTP binding domain ssp1_RS08630 PF03144 Elongation factor Tu domain 2 ssp1_RS08630 PF16658 Class II release factor RF3, C-terminal domain ssp1_RS08640 PF01225 Mur ligase family, catalytic domain ssp1_RS08640 PF02875 Mur ligase family, glutamate ligase domain ssp1_RS08640 PF08245 Mur ligase middle domain ssp1_RS08645 PF04101 Glycosyltransferase family 28 C-terminal domain ssp1_RS08645 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ssp1_RS08650 PF07690 Major Facilitator Superfamily ssp1_RS08660 PF00756 Putative esterase ssp1_RS08665 PF01235 Sodium:alanine symporter family ssp1_RS08670 PF01594 AI-2E family transporter ssp1_RS08680 PF02080 TrkA-C domain ssp1_RS08680 PF00999 Sodium/hydrogen exchanger family ssp1_RS08680 PF02254 TrkA-N domain ssp1_RS08685 PF03448 MgtE intracellular N domain ssp1_RS08685 PF01769 Divalent cation transporter ssp1_RS08685 PF00571 CBS domain ssp1_RS08690 PF00849 RNA pseudouridylate synthase ssp1_RS08695 PF01513 ATP-NAD kinase ssp1_RS08700 PF04607 Region found in RelA / SpoT proteins ssp1_RS08715 PF01152 Bacterial-like globin ssp1_RS08725 PF01432 Peptidase family M3 ssp1_RS08725 PF08439 Oligopeptidase F ssp1_RS08735 PF05389 Negative regulator of genetic competence (MecA) ssp1_RS08740 PF03960 ArsC family ssp1_RS08745 PF00579 tRNA synthetases class I (W and Y) ssp1_RS08750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ssp1_RS08755 PF00005 ABC transporter ssp1_RS08755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ssp1_RS08760 PF00005 ABC transporter ssp1_RS08760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ssp1_RS08765 PF12911 N-terminal TM domain of oligopeptide transport permease C ssp1_RS08765 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS08770 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS08780 PF00109 Beta-ketoacyl synthase, N-terminal domain ssp1_RS08780 PF02801 Beta-ketoacyl synthase, C-terminal domain ssp1_RS08785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ssp1_RS08785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ssp1_RS08795 PF00004 ATPase family associated with various cellular activities (AAA) ssp1_RS08795 PF07724 AAA domain (Cdc48 subfamily) ssp1_RS08795 PF17871 AAA lid domain ssp1_RS08795 PF02861 Clp amino terminal domain, pathogenicity island component ssp1_RS08795 PF10431 C-terminal, D2-small domain, of ClpB protein ssp1_RS08800 PF01757 Acyltransferase family ssp1_RS08805 PF01883 Iron-sulfur cluster assembly protein ssp1_RS08815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ssp1_RS08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS08820 PF07457 Protein of unknown function (DUF1516) ssp1_RS08825 PF01557 Fumarylacetoacetate (FAA) hydrolase family ssp1_RS08830 PF13361 UvrD-like helicase C-terminal domain ssp1_RS08830 PF00580 UvrD/REP helicase N-terminal domain ssp1_RS08830 PF12705 PD-(D/E)XK nuclease superfamily ssp1_RS08835 PF12705 PD-(D/E)XK nuclease superfamily ssp1_RS08835 PF13361 UvrD-like helicase C-terminal domain ssp1_RS08840 PF10502 Signal peptidase, peptidase S26 ssp1_RS08845 PF10502 Signal peptidase, peptidase S26 ssp1_RS08850 PF09335 SNARE associated Golgi protein ssp1_RS08855 PF00342 Phosphoglucose isomerase ssp1_RS08860 PF00764 Arginosuccinate synthase ssp1_RS08865 PF00206 Lyase ssp1_RS08865 PF14698 Argininosuccinate lyase C-terminal ssp1_RS08870 PF03009 Glycerophosphoryl diester phosphodiesterase family ssp1_RS08875 PF03009 Glycerophosphoryl diester phosphodiesterase family ssp1_RS08885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ssp1_RS08885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ssp1_RS08890 PF00202 Aminotransferase class-III ssp1_RS08895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ssp1_RS08900 PF00575 S1 RNA binding domain ssp1_RS08905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ssp1_RS08915 PF13244 Domain of unknown function (DUF4040) ssp1_RS08915 PF00361 Proton-conducting membrane transporter ssp1_RS08915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ssp1_RS08920 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ssp1_RS08925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ssp1_RS08930 PF00361 Proton-conducting membrane transporter ssp1_RS08935 PF01899 Na+/H+ ion antiporter subunit ssp1_RS08940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ssp1_RS08945 PF03334 Na+/H+ antiporter subunit ssp1_RS08960 PF03061 Thioesterase superfamily ssp1_RS08965 PF03553 Na+/H+ antiporter family ssp1_RS08965 PF13726 Na+-H+ antiporter family ssp1_RS08970 PF02789 Cytosol aminopeptidase family, N-terminal domain ssp1_RS08970 PF00883 Cytosol aminopeptidase family, catalytic domain ssp1_RS08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS08980 PF01521 Iron-sulphur cluster biosynthesis ssp1_RS08985 PF07293 Protein of unknown function (DUF1450) ssp1_RS08990 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS08995 PF07315 Protein of unknown function (DUF1462) ssp1_RS09000 PF01106 NifU-like domain ssp1_RS09005 PF03466 LysR substrate binding domain ssp1_RS09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS09010 PF03601 Conserved hypothetical protein 698 ssp1_RS09015 PF04914 DltD protein ssp1_RS09020 PF00550 Phosphopantetheine attachment site ssp1_RS09025 PF03062 MBOAT, membrane-bound O-acyltransferase family ssp1_RS09030 PF13193 AMP-binding enzyme C-terminal domain ssp1_RS09030 PF00501 AMP-binding enzyme ssp1_RS09040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ssp1_RS09040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ssp1_RS09045 PF13344 Haloacid dehalogenase-like hydrolase ssp1_RS09050 PF01934 Protein of unknown function DUF86 ssp1_RS09060 PF06265 Protein of unknown function (DUF1027) ssp1_RS09065 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ssp1_RS09065 PF04055 Radical SAM superfamily ssp1_RS09070 PF02872 5'-nucleotidase, C-terminal domain ssp1_RS09075 PF01925 Sulfite exporter TauE/SafE ssp1_RS09080 PF01904 Protein of unknown function DUF72 ssp1_RS09085 PF03060 Nitronate monooxygenase ssp1_RS09090 PF00571 CBS domain ssp1_RS09090 PF01595 Cyclin M transmembrane N-terminal domain ssp1_RS09090 PF03471 Transporter associated domain ssp1_RS09095 PF01458 Uncharacterized protein family (UPF0051) ssp1_RS09100 PF01592 NifU-like N terminal domain ssp1_RS09105 PF00266 Aminotransferase class-V ssp1_RS09110 PF01458 Uncharacterized protein family (UPF0051) ssp1_RS09115 PF00005 ABC transporter ssp1_RS09125 PF05532 CsbD-like ssp1_RS09130 PF03180 NLPA lipoprotein ssp1_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS09140 PF09383 NIL domain ssp1_RS09140 PF00005 ABC transporter ssp1_RS09150 PF01751 Toprim domain ssp1_RS09160 PF01597 Glycine cleavage H-protein ssp1_RS09165 PF03960 ArsC family ssp1_RS09170 PF00085 Thioredoxin ssp1_RS09180 PF01487 Type I 3-dehydroquinase ssp1_RS09185 PF02566 OsmC-like protein ssp1_RS09195 PF00300 Histidine phosphatase superfamily (branch 1) ssp1_RS09230 PF05908 Poly-gamma-glutamate hydrolase ssp1_RS09255 PF00313 'Cold-shock' DNA-binding domain ssp1_RS09275 PF16916 Dimerisation domain of Zinc Transporter ssp1_RS09275 PF01545 Cation efflux family ssp1_RS09290 PF00248 Aldo/keto reductase family ssp1_RS09295 PF14278 Transcriptional regulator C-terminal region ssp1_RS09295 PF00440 Bacterial regulatory proteins, tetR family ssp1_RS09340 PF10668 Phage terminase small subunit ssp1_RS09340 PF03592 Terminase small subunit ssp1_RS09345 PF04072 Leucine carboxyl methyltransferase ssp1_RS09350 PF01497 Periplasmic binding protein ssp1_RS09370 PF03592 Terminase small subunit ssp1_RS09370 PF10668 Phage terminase small subunit ssp1_RS09460 PF01668 SmpB protein ssp1_RS09465 PF17876 Cold shock domain ssp1_RS09465 PF00773 RNB domain ssp1_RS09465 PF08206 Ribonuclease B OB domain ssp1_RS09465 PF00575 S1 RNA binding domain ssp1_RS09470 PF12146 Serine aminopeptidase, S33 ssp1_RS09475 PF03840 Preprotein translocase SecG subunit ssp1_RS09485 PF03952 Enolase, N-terminal domain ssp1_RS09485 PF00113 Enolase, C-terminal TIM barrel domain ssp1_RS09490 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ssp1_RS09490 PF01676 Metalloenzyme superfamily ssp1_RS09495 PF00121 Triosephosphate isomerase ssp1_RS09500 PF00162 Phosphoglycerate kinase ssp1_RS09505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ssp1_RS09505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ssp1_RS09510 PF04198 Putative sugar-binding domain ssp1_RS09525 PF01370 NAD dependent epimerase/dehydratase family ssp1_RS09525 PF08338 Domain of unknown function (DUF1731) ssp1_RS09535 PF00574 Clp protease ssp1_RS09585 PF14527 WhiA LAGLIDADG-like domain ssp1_RS09585 PF02650 WhiA C-terminal HTH domain ssp1_RS09585 PF10298 WhiA N-terminal LAGLIDADG-like domain ssp1_RS09590 PF01933 Uncharacterised protein family UPF0052 ssp1_RS09595 PF03668 P-loop ATPase protein family ssp1_RS09600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS09610 PF14602 Hexapeptide repeat of succinyl-transferase ssp1_RS09615 PF01790 Prolipoprotein diacylglyceryl transferase ssp1_RS09620 PF07475 HPr Serine kinase C-terminal domain ssp1_RS09620 PF02603 HPr Serine kinase N terminus ssp1_RS09625 PF00005 ABC transporter ssp1_RS09625 PF17755 UvrA DNA-binding domain ssp1_RS09625 PF17760 UvrA interaction domain ssp1_RS09630 PF17757 UvrB interaction domain ssp1_RS09630 PF02151 UvrB/uvrC motif ssp1_RS09630 PF12344 Ultra-violet resistance protein B ssp1_RS09630 PF04851 Type III restriction enzyme, res subunit ssp1_RS09630 PF00271 Helicase conserved C-terminal domain ssp1_RS09645 PF05257 CHAP domain ssp1_RS09645 PF01476 LysM domain ssp1_RS09655 PF02810 SEC-C motif ssp1_RS09655 PF07517 SecA DEAD-like domain ssp1_RS09655 PF01043 SecA preprotein cross-linking domain ssp1_RS09655 PF07516 SecA Wing and Scaffold domain ssp1_RS09660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ssp1_RS09660 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ssp1_RS09670 PF04851 Type III restriction enzyme, res subunit ssp1_RS09670 PF00271 Helicase conserved C-terminal domain ssp1_RS09675 PF02645 Uncharacterised protein, DegV family COG1307 ssp1_RS09680 PF01205 Uncharacterized protein family UPF0029 ssp1_RS09680 PF09186 Domain of unknown function (DUF1949) ssp1_RS09685 PF00953 Glycosyl transferase family 4 ssp1_RS09690 PF00990 Diguanylate cyclase, GGDEF domain ssp1_RS09690 PF07694 5TMR of 5TMR-LYT ssp1_RS09705 PF07687 Peptidase dimerisation domain ssp1_RS09705 PF01546 Peptidase family M20/M25/M40 ssp1_RS09710 PF02595 Glycerate kinase family ssp1_RS09730 PF01565 FAD binding domain ssp1_RS09730 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ssp1_RS09745 PF00005 ABC transporter ssp1_RS09755 PF01032 FecCD transport family ssp1_RS09760 PF00268 Ribonucleotide reductase, small chain ssp1_RS09765 PF02867 Ribonucleotide reductase, barrel domain ssp1_RS09765 PF00317 Ribonucleotide reductase, all-alpha domain ssp1_RS09765 PF08343 Ribonucleotide reductase N-terminal ssp1_RS09770 PF07972 NrdI Flavodoxin like ssp1_RS09780 PF14489 QueF-like protein ssp1_RS09785 PF00854 POT family ssp1_RS09790 PF00781 Diacylglycerol kinase catalytic domain ssp1_RS09795 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) ssp1_RS09800 PF00155 Aminotransferase class I and II ssp1_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component ssp1_RS09810 PF00571 CBS domain ssp1_RS09810 PF00005 ABC transporter ssp1_RS09815 PF00271 Helicase conserved C-terminal domain ssp1_RS09815 PF00570 HRDC domain ssp1_RS09815 PF16124 RecQ zinc-binding ssp1_RS09815 PF09382 RQC domain ssp1_RS09815 PF00270 DEAD/DEAH box helicase ssp1_RS09820 PF12848 ABC transporter ssp1_RS09820 PF16326 ABC transporter C-terminal domain ssp1_RS09820 PF00005 ABC transporter ssp1_RS09825 PF02535 ZIP Zinc transporter ssp1_RS09830 PF00884 Sulfatase ssp1_RS09850 PF01063 Amino-transferase class IV ssp1_RS09855 PF04715 Anthranilate synthase component I, N terminal region ssp1_RS09855 PF00425 chorismate binding enzyme ssp1_RS09860 PF00591 Glycosyl transferase family, a/b domain ssp1_RS09860 PF02885 Glycosyl transferase family, helical bundle domain ssp1_RS09860 PF00117 Glutamine amidotransferase class-I ssp1_RS09865 PF06508 Queuosine biosynthesis protein QueC ssp1_RS09870 PF01242 6-pyruvoyl tetrahydropterin synthase ssp1_RS09875 PF04055 Radical SAM superfamily ssp1_RS09885 PF00535 Glycosyl transferase family 2 ssp1_RS09890 PF00248 Aldo/keto reductase family ssp1_RS09895 PF03471 Transporter associated domain ssp1_RS09895 PF01595 Cyclin M transmembrane N-terminal domain ssp1_RS09895 PF00571 CBS domain ssp1_RS09900 PF01979 Amidohydrolase family ssp1_RS09905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ssp1_RS09905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ssp1_RS09910 PF00294 pfkB family carbohydrate kinase ssp1_RS09915 PF00455 DeoR C terminal sensor domain ssp1_RS09915 PF08220 DeoR-like helix-turn-helix domain ssp1_RS09920 PF04073 Aminoacyl-tRNA editing domain ssp1_RS09930 PF07690 Major Facilitator Superfamily ssp1_RS09945 PF03441 FAD binding domain of DNA photolyase ssp1_RS09945 PF00875 DNA photolyase ssp1_RS09950 PF00939 Sodium:sulfate symporter transmembrane region ssp1_RS09955 PF00056 lactate/malate dehydrogenase, NAD binding domain ssp1_RS09955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ssp1_RS09965 PF00248 Aldo/keto reductase family ssp1_RS09970 PF02492 CobW/HypB/UreG, nucleotide-binding domain ssp1_RS09970 PF07683 Cobalamin synthesis protein cobW C-terminal domain ssp1_RS09975 PF01047 MarR family ssp1_RS09980 PF00664 ABC transporter transmembrane region ssp1_RS09980 PF00005 ABC transporter ssp1_RS09985 PF00005 ABC transporter ssp1_RS09985 PF00664 ABC transporter transmembrane region ssp1_RS09990 PF02673 Bacitracin resistance protein BacA ssp1_RS10000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ssp1_RS10005 PF03641 Possible lysine decarboxylase ssp1_RS10010 PF00753 Metallo-beta-lactamase superfamily ssp1_RS10015 PF02082 Transcriptional regulator ssp1_RS10025 PF13302 Acetyltransferase (GNAT) domain ssp1_RS10050 PF04306 Protein of unknown function (DUF456) ssp1_RS10055 PF07690 Major Facilitator Superfamily ssp1_RS10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS10060 PF03466 LysR substrate binding domain ssp1_RS10075 PF01709 Transcriptional regulator ssp1_RS10085 PF12833 Helix-turn-helix domain ssp1_RS10085 PF07883 Cupin domain ssp1_RS10095 PF05257 CHAP domain ssp1_RS10095 PF01476 LysM domain ssp1_RS10100 PF01384 Phosphate transporter family ssp1_RS10105 PF01865 Protein of unknown function DUF47 ssp1_RS10115 PF02687 FtsX-like permease family ssp1_RS10120 PF00005 ABC transporter ssp1_RS10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ssp1_RS10130 PF00486 Transcriptional regulatory protein, C terminal ssp1_RS10130 PF00072 Response regulator receiver domain ssp1_RS10135 PF01370 NAD dependent epimerase/dehydratase family ssp1_RS10145 PF07859 alpha/beta hydrolase fold ssp1_RS10160 PF03610 PTS system fructose IIA component ssp1_RS10165 PF02734 DAK2 domain ssp1_RS10170 PF02733 Dak1 domain ssp1_RS10175 PF01032 FecCD transport family ssp1_RS10180 PF01032 FecCD transport family ssp1_RS10185 PF00005 ABC transporter ssp1_RS10190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ssp1_RS10190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ssp1_RS10195 PF07662 Na+ dependent nucleoside transporter C-terminus ssp1_RS10195 PF01773 Na+ dependent nucleoside transporter N-terminus ssp1_RS10200 PF00664 ABC transporter transmembrane region ssp1_RS10200 PF00005 ABC transporter ssp1_RS10205 PF00768 D-alanyl-D-alanine carboxypeptidase ssp1_RS10205 PF07943 Penicillin-binding protein 5, C-terminal domain ssp1_RS10210 PF01467 Cytidylyltransferase-like ssp1_RS10215 PF00535 Glycosyl transferase family 2 ssp1_RS10220 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ssp1_RS10225 PF01061 ABC-2 type transporter ssp1_RS10230 PF00005 ABC transporter ssp1_RS10235 PF03808 Glycosyl transferase WecB/TagA/CpsF family ssp1_RS10245 PF02742 Iron dependent repressor, metal binding and dimerisation domain ssp1_RS10245 PF01325 Iron dependent repressor, N-terminal DNA binding domain ssp1_RS10245 PF18357 Diphteria toxin repressor SH3 domain ssp1_RS10250 PF00005 ABC transporter ssp1_RS10255 PF00950 ABC 3 transport family ssp1_RS10260 PF01297 Zinc-uptake complex component A periplasmic ssp1_RS10265 PF00999 Sodium/hydrogen exchanger family ssp1_RS10270 PF03334 Na+/H+ antiporter subunit ssp1_RS10275 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ssp1_RS10280 PF01899 Na+/H+ ion antiporter subunit ssp1_RS10285 PF00361 Proton-conducting membrane transporter ssp1_RS10290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ssp1_RS10295 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ssp1_RS10300 PF13244 Domain of unknown function (DUF4040) ssp1_RS10300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ssp1_RS10300 PF00361 Proton-conducting membrane transporter ssp1_RS10335 PF00561 alpha/beta hydrolase fold ssp1_RS10355 PF13419 Haloacid dehalogenase-like hydrolase ssp1_RS10360 PF01032 FecCD transport family ssp1_RS10365 PF01497 Periplasmic binding protein ssp1_RS10370 PF01554 MatE ssp1_RS10380 PF10576 Iron-sulfur binding domain of endonuclease III ssp1_RS10380 PF00730 HhH-GPD superfamily base excision DNA repair protein ssp1_RS10380 PF00633 Helix-hairpin-helix motif ssp1_RS10385 PF03485 Arginyl tRNA synthetase N terminal domain ssp1_RS10385 PF00750 tRNA synthetases class I (R) ssp1_RS10385 PF05746 DALR anticodon binding domain ssp1_RS10400 PF08741 YwhD family ssp1_RS10405 PF01966 HD domain ssp1_RS10410 PF03352 Methyladenine glycosylase ssp1_RS10410 PF00117 Glutamine amidotransferase class-I ssp1_RS10410 PF00958 GMP synthase C terminal domain ssp1_RS10410 PF13302 Acetyltransferase (GNAT) domain ssp1_RS10410 PF13673 Acetyltransferase (GNAT) domain ssp1_RS10415 PF03358 NADPH-dependent FMN reductase ssp1_RS10420 PF00248 Aldo/keto reductase family ssp1_RS10425 PF07293 Protein of unknown function (DUF1450) ssp1_RS10430 PF00288 GHMP kinases N terminal domain ssp1_RS10430 PF08544 GHMP kinases C terminal ssp1_RS10440 PF00288 GHMP kinases N terminal domain ssp1_RS10440 PF08544 GHMP kinases C terminal ssp1_RS10440 PF10509 Galactokinase galactose-binding signature ssp1_RS10445 PF03099 Biotin/lipoate A/B protein ligase family ssp1_RS10450 PF01515 Phosphate acetyl/butaryl transferase ssp1_RS10455 PF06778 Chlorite dismutase ssp1_RS10485 PF03167 Uracil DNA glycosylase superfamily ssp1_RS10490 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ssp1_RS10495 PF08543 Phosphomethylpyrimidine kinase ssp1_RS10500 PF14731 Staphopain proregion ssp1_RS10500 PF05543 Staphopain peptidase C47 ssp1_RS10510 PF07690 Major Facilitator Superfamily ssp1_RS10520 PF01380 SIS domain ssp1_RS10525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ssp1_RS10530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ssp1_RS10540 PF02585 GlcNAc-PI de-N-acetylase ssp1_RS10545 PF02649 Type I GTP cyclohydrolase folE2 ssp1_RS10550 PF07690 Major Facilitator Superfamily ssp1_RS10565 PF10425 C-terminus of bacterial fibrinogen-binding adhesin ssp1_RS10565 PF17210 SdrD B-like domain ssp1_RS10565 PF00746 LPXTG cell wall anchor motif ssp1_RS10565 PF17961 Bacterial Ig domain ssp1_RS10565 PF04650 YSIRK type signal peptide ssp1_RS10565 PF10425 C-terminus of bacterial fibrinogen-binding adhesin ssp1_RS10565 PF17210 SdrD B-like domain ssp1_RS10565 PF00746 LPXTG cell wall anchor motif ssp1_RS10565 PF04650 YSIRK type signal peptide ssp1_RS10565 PF17961 Bacterial Ig domain ssp1_RS10570 PF03358 NADPH-dependent FMN reductase ssp1_RS10580 PF14437 MafB19-like deaminase ssp1_RS10585 PF01712 Deoxynucleoside kinase ssp1_RS10590 PF01712 Deoxynucleoside kinase ssp1_RS10600 PF01063 Amino-transferase class IV ssp1_RS10605 PF01370 NAD dependent epimerase/dehydratase family ssp1_RS10610 PF02872 5'-nucleotidase, C-terminal domain ssp1_RS10610 PF00149 Calcineurin-like phosphoesterase ssp1_RS10620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ssp1_RS10620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ssp1_RS10625 PF08240 Alcohol dehydrogenase GroES-like domain ssp1_RS10625 PF00107 Zinc-binding dehydrogenase ssp1_RS10630 PF07690 Major Facilitator Superfamily ssp1_RS10635 PF00455 DeoR C terminal sensor domain ssp1_RS10635 PF08220 DeoR-like helix-turn-helix domain ssp1_RS10645 PF02423 Ornithine cyclodeaminase/mu-crystallin family ssp1_RS10655 PF00155 Aminotransferase class I and II ssp1_RS10660 PF07687 Peptidase dimerisation domain ssp1_RS10660 PF01546 Peptidase family M20/M25/M40 ssp1_RS10665 PF03144 Elongation factor Tu domain 2 ssp1_RS10665 PF00009 Elongation factor Tu GTP binding domain ssp1_RS10665 PF03143 Elongation factor Tu C-terminal domain ssp1_RS10670 PF00009 Elongation factor Tu GTP binding domain ssp1_RS10670 PF03764 Elongation factor G, domain IV ssp1_RS10670 PF03144 Elongation factor Tu domain 2 ssp1_RS10670 PF14492 Elongation Factor G, domain II ssp1_RS10670 PF00679 Elongation factor G C-terminus ssp1_RS10675 PF00177 Ribosomal protein S7p/S5e ssp1_RS10680 PF00164 Ribosomal protein S12/S23 ssp1_RS10685 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ssp1_RS10690 PF05000 RNA polymerase Rpb1, domain 4 ssp1_RS10690 PF04983 RNA polymerase Rpb1, domain 3 ssp1_RS10690 PF00623 RNA polymerase Rpb1, domain 2 ssp1_RS10690 PF04997 RNA polymerase Rpb1, domain 1 ssp1_RS10690 PF04998 RNA polymerase Rpb1, domain 5 ssp1_RS10695 PF10385 RNA polymerase beta subunit external 1 domain ssp1_RS10695 PF04561 RNA polymerase Rpb2, domain 2 ssp1_RS10695 PF04563 RNA polymerase beta subunit ssp1_RS10695 PF00562 RNA polymerase Rpb2, domain 6 ssp1_RS10695 PF04560 RNA polymerase Rpb2, domain 7 ssp1_RS10695 PF04565 RNA polymerase Rpb2, domain 3 ssp1_RS10700 PF05175 Methyltransferase small domain ssp1_RS10705 PF00542 Ribosomal protein L7/L12 C-terminal domain ssp1_RS10705 PF16320 Ribosomal protein L7/L12 dimerisation domain ssp1_RS10710 PF00466 Ribosomal protein L10 ssp1_RS10720 PF00687 Ribosomal protein L1p/L10e family ssp1_RS10725 PF03946 Ribosomal protein L11, N-terminal domain ssp1_RS10725 PF00298 Ribosomal protein L11, RNA binding domain ssp1_RS10730 PF02357 Transcription termination factor nusG ssp1_RS10735 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ssp1_RS10740 PF00471 Ribosomal protein L33 ssp1_RS10750 PF05991 YacP-like NYN domain ssp1_RS10755 PF00588 SpoU rRNA Methylase family ssp1_RS10755 PF08032 RNA 2'-O ribose methyltransferase substrate binding ssp1_RS10760 PF00636 Ribonuclease III domain ssp1_RS10765 PF01406 tRNA synthetases class I (C) catalytic domain ssp1_RS10765 PF09190 DALR domain ssp1_RS10770 PF00132 Bacterial transferase hexapeptide (six repeats) ssp1_RS10775 PF00749 tRNA synthetases class I (E and Q), catalytic domain ssp1_RS10785 PF18073 Rubredoxin metal binding domain ssp1_RS10790 PF00004 ATPase family associated with various cellular activities (AAA) ssp1_RS10790 PF10431 C-terminal, D2-small domain, of ClpB protein ssp1_RS10790 PF02861 Clp amino terminal domain, pathogenicity island component ssp1_RS10790 PF07724 AAA domain (Cdc48 subfamily) ssp1_RS10790 PF17871 AAA lid domain ssp1_RS10795 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ssp1_RS10800 PF02151 UvrB/uvrC motif ssp1_RS10805 PF05848 CtsR N-terminal HTH domain ssp1_RS10805 PF17727 CtsR C-terminal dimerization domain ssp1_RS10810 PF01773 Na+ dependent nucleoside transporter N-terminus ssp1_RS10810 PF07662 Na+ dependent nucleoside transporter C-terminus ssp1_RS10815 PF01174 SNO glutamine amidotransferase family ssp1_RS10820 PF01680 SOR/SNZ family ssp1_RS10825 PF00155 Aminotransferase class I and II ssp1_RS10825 PF00392 Bacterial regulatory proteins, gntR family ssp1_RS10920 PF00152 tRNA synthetases class II (D, K and N) ssp1_RS10920 PF01336 OB-fold nucleic acid binding domain ssp1_RS10925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ssp1_RS10930 PF02152 Dihydroneopterin aldolase ssp1_RS10935 PF00809 Pterin binding enzyme ssp1_RS10940 PF00291 Pyridoxal-phosphate dependent enzyme ssp1_RS10945 PF01430 Hsp33 protein ssp1_RS10950 PF01434 Peptidase family M41 ssp1_RS10950 PF00004 ATPase family associated with various cellular activities (AAA) ssp1_RS10950 PF06480 FtsH Extracellular ssp1_RS10950 PF17862 AAA+ lid domain ssp1_RS10955 PF00156 Phosphoribosyl transferase domain ssp1_RS10960 PF01171 PP-loop family ssp1_RS10960 PF11734 TilS substrate C-terminal domain ssp1_RS10965 PF00575 S1 RNA binding domain ssp1_RS10975 PF01479 S4 domain ssp1_RS10980 PF03819 MazG nucleotide pyrophosphohydrolase domain ssp1_RS10980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ssp1_RS10985 PF01943 Polysaccharide biosynthesis protein ssp1_RS10985 PF14667 Polysaccharide biosynthesis C-terminal domain ssp1_RS10990 PF00270 DEAD/DEAH box helicase ssp1_RS10990 PF17757 UvrB interaction domain ssp1_RS10990 PF03461 TRCF domain ssp1_RS10990 PF00271 Helicase conserved C-terminal domain ssp1_RS10990 PF02559 CarD-like/TRCF domain ssp1_RS10995 PF01195 Peptidyl-tRNA hydrolase ssp1_RS11000 PF14693 Ribosomal protein TL5, C-terminal domain ssp1_RS11000 PF01386 Ribosomal L25p family ssp1_RS11005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ssp1_RS11005 PF14572 Phosphoribosyl synthetase-associated domain ssp1_RS11010 PF00483 Nucleotidyl transferase ssp1_RS11010 PF00132 Bacterial transferase hexapeptide (six repeats) ssp1_RS11015 PF04026 SpoVG ssp1_RS11020 PF01042 Endoribonuclease L-PSP ssp1_RS11025 PF09182 Bacterial purine repressor, N-terminal ssp1_RS11025 PF00156 Phosphoribosyl transferase domain ssp1_RS11030 PF08544 GHMP kinases C terminal ssp1_RS11030 PF00288 GHMP kinases N terminal domain ssp1_RS11035 PF06257 Biofilm formation stimulator VEG ssp1_RS11040 PF00398 Ribosomal RNA adenine dimethylase ssp1_RS11045 PF01751 Toprim domain ssp1_RS11045 PF13331 Domain of unknown function (DUF4093) ssp1_RS11050 PF01026 TatD related DNase ssp1_RS11055 PF01588 Putative tRNA binding domain ssp1_RS11055 PF09334 tRNA synthetases class I (M) ssp1_RS11055 PF08264 Anticodon-binding domain of tRNA ssp1_RS11060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ssp1_RS11065 PF01541 GIY-YIG catalytic domain ssp1_RS11070 PF05175 Methyltransferase small domain ssp1_RS11075 PF06156 Initiation control protein YabA ssp1_RS11080 PF04468 PSP1 C-terminal conserved region ssp1_RS11085 PF09115 DNA polymerase III, delta subunit, C terminal ssp1_RS11090 PF06153 Cyclic-di-AMP receptor ssp1_RS11095 PF02223 Thymidylate kinase ssp1_RS11100 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ssp1_RS11100 PF01276 Orn/Lys/Arg decarboxylase, major domain ssp1_RS11105 PF13302 Acetyltransferase (GNAT) domain ssp1_RS11130 PF02132 RecR protein ssp1_RS11130 PF13662 Toprim domain ssp1_RS11135 PF02575 YbaB/EbfC DNA-binding family ssp1_RS11140 PF12169 DNA polymerase III subunits gamma and tau domain III ssp1_RS11155 PF00392 Bacterial regulatory proteins, gntR family ssp1_RS11155 PF07702 UTRA domain ssp1_RS11160 PF16657 Maltogenic Amylase, C-terminal domain ssp1_RS11160 PF00128 Alpha amylase, catalytic domain ssp1_RS11165 PF00367 phosphotransferase system, EIIB ssp1_RS11165 PF02378 Phosphotransferase system, EIIC ssp1_RS11175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ssp1_RS11175 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS11180 PF00310 Glutamine amidotransferases class-II ssp1_RS11180 PF04898 Glutamate synthase central domain ssp1_RS11180 PF01645 Conserved region in glutamate synthase ssp1_RS11180 PF01493 GXGXG motif ssp1_RS11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ssp1_RS11185 PF03466 LysR substrate binding domain ssp1_RS11200 PF13302 Acetyltransferase (GNAT) domain ssp1_RS11205 PF00293 NUDIX domain ssp1_RS11215 PF00534 Glycosyl transferases group 1 ssp1_RS11215 PF09318 Glycosyl transferase 1 domain A ssp1_RS11220 PF01370 NAD dependent epimerase/dehydratase family ssp1_RS11225 PF05257 CHAP domain ssp1_RS11225 PF01476 LysM domain ssp1_RS11230 PF00313 'Cold-shock' DNA-binding domain ssp1_RS11235 PF06993 Protein of unknown function (DUF1304) ssp1_RS11240 PF17041 E domain ssp1_RS11240 PF07501 G5 domain ssp1_RS11240 PF00746 LPXTG cell wall anchor motif ssp1_RS11240 PF17041 E domain ssp1_RS11240 PF04650 YSIRK type signal peptide ssp1_RS11240 PF07501 G5 domain ssp1_RS11240 PF04650 YSIRK type signal peptide ssp1_RS11240 PF00746 LPXTG cell wall anchor motif ssp1_RS11245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ssp1_RS11245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ssp1_RS11255 PF01047 MarR family ssp1_RS11260 PF01053 Cys/Met metabolism PLP-dependent enzyme ssp1_RS11265 PF00291 Pyridoxal-phosphate dependent enzyme ssp1_RS11275 PF01965 DJ-1/PfpI family ssp1_RS11280 PF01810 LysE type translocator ssp1_RS11285 PF00209 Sodium:neurotransmitter symporter family ssp1_RS11295 PF12146 Serine aminopeptidase, S33 ssp1_RS11300 PF01569 PAP2 superfamily ssp1_RS11315 PF10057 Uncharacterized conserved protein (DUF2294) ssp1_RS11320 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ssp1_RS11325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ssp1_RS11325 PF00361 Proton-conducting membrane transporter ssp1_RS11340 PF07683 Cobalamin synthesis protein cobW C-terminal domain ssp1_RS11340 PF02492 CobW/HypB/UreG, nucleotide-binding domain ssp1_RS11350 PF00117 Glutamine amidotransferase class-I ssp1_RS11350 PF00958 GMP synthase C terminal domain ssp1_RS11355 PF00478 IMP dehydrogenase / GMP reductase domain ssp1_RS11355 PF00571 CBS domain ssp1_RS11360 PF00860 Permease family ssp1_RS11370 PF11181 Heat induced stress protein YflT ssp1_RS11390 PF00375 Sodium:dicarboxylate symporter family ssp1_RS11395 PF00881 Nitroreductase family ssp1_RS11400 PF00578 AhpC/TSA family ssp1_RS11405 PF07992 Pyridine nucleotide-disulphide oxidoreductase ssp1_RS11405 PF13192 Thioredoxin domain ssp1_RS11425 PF00300 Histidine phosphatase superfamily (branch 1) ssp1_RS11430 PF01810 LysE type translocator ssp1_RS11450 PF03592 Terminase small subunit ssp1_RS11450 PF10668 Phage terminase small subunit ssp1_RS11525 PF14659 Phage integrase, N-terminal SAM-like domain ssp1_RS11525 PF00589 Phage integrase family ssp1_RS11530 PF01084 Ribosomal protein S18 ssp1_RS11535 PF00436 Single-strand binding protein family ssp1_RS11540 PF01250 Ribosomal protein S6 ssp1_RS11555 PF01926 50S ribosome-binding GTPase ssp1_RS11555 PF06071 Protein of unknown function (DUF933) ssp1_RS11560 PF06107 Bacterial protein of unknown function (DUF951) ssp1_RS11565 PF00924 Mechanosensitive ion channel ssp1_RS11570 PF17762 HTH domain found in ParB protein ssp1_RS11570 PF02195 ParB-like nuclease domain ssp1_RS11580 PF01053 Cys/Met metabolism PLP-dependent enzyme ssp1_RS11585 PF01053 Cys/Met metabolism PLP-dependent enzyme ssp1_RS11590 PF02219 Methylenetetrahydrofolate reductase ssp1_RS11590 PF02574 Homocysteine S-methyltransferase ssp1_RS11595 PF01717 Cobalamin-independent synthase, Catalytic domain ssp1_RS11595 PF08267 Cobalamin-independent synthase, N-terminal domain ssp1_RS11615 PF02803 Thiolase, C-terminal domain ssp1_RS11615 PF00108 Thiolase, N-terminal domain ssp1_RS11620 PF02837 Glycosyl hydrolases family 2, sugar binding domain ssp1_RS11620 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ssp1_RS11620 PF00703 Glycosyl hydrolases family 2 ssp1_RS11625 PF00106 short chain dehydrogenase ssp1_RS11630 PF03786 D-mannonate dehydratase (UxuA) ssp1_RS11635 PF02614 Glucuronate isomerase ssp1_RS11645 PF00294 pfkB family carbohydrate kinase ssp1_RS11650 PF01081 KDPG and KHG aldolase ssp1_RS11655 PF12833 Helix-turn-helix domain ssp1_RS11665 PF00933 Glycosyl hydrolase family 3 N terminal domain ssp1_RS11670 PF07683 Cobalamin synthesis protein cobW C-terminal domain ssp1_RS11670 PF02492 CobW/HypB/UreG, nucleotide-binding domain ssp1_RS11685 PF13302 Acetyltransferase (GNAT) domain ssp1_RS11700 PF00005 ABC transporter ssp1_RS11705 PF02687 FtsX-like permease family ssp1_RS11715 PF04650 YSIRK type signal peptide ssp1_RS11775 PF01797 Transposase IS200 like ssp1_RS11780 PF02687 FtsX-like permease family ssp1_RS11780 PF12704 MacB-like periplasmic core domain ssp1_RS11785 PF00005 ABC transporter ssp1_RS11810 PF16295 Tetracyclin repressor-like, C-terminal domain ssp1_RS11810 PF00440 Bacterial regulatory proteins, tetR family ssp1_RS11825 PF02195 ParB-like nuclease domain ssp1_RS11825 PF17762 HTH domain found in ParB protein ssp1_RS11830 PF02527 rRNA small subunit methyltransferase G ssp1_RS11835 PF13932 GidA associated domain ssp1_RS11835 PF01134 Glucose inhibited division protein A ssp1_RS11840 PF10396 GTP-binding protein TrmE N-terminus ssp1_RS11840 PF12631 MnmE helical domain ssp1_RS11840 PF01926 50S ribosome-binding GTPase ssp1_RS11845 PF00825 Ribonuclease P ssp1_RS11850 PF00468 Ribosomal protein L34