locus-tag class description JGY87_RS00005 PF00308 Bacterial dnaA protein JGY87_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JGY87_RS00005 PF11638 DnaA N-terminal domain JGY87_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JGY87_RS00010 PF02767 DNA polymerase III beta subunit, central domain JGY87_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JGY87_RS00020 PF02463 RecF/RecN/SMC N terminal domain JGY87_RS00025 PF01751 Toprim domain JGY87_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS00025 PF00204 DNA gyrase B JGY87_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JGY87_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JGY87_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JGY87_RS00035 PF01256 Carbohydrate kinase JGY87_RS00040 PF00221 Aromatic amino acid lyase JGY87_RS00045 PF02403 Seryl-tRNA synthetase N-terminal domain JGY87_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JGY87_RS00050 PF03591 AzlC protein JGY87_RS00060 PF00561 alpha/beta hydrolase fold JGY87_RS00070 PF02272 DHHA1 domain JGY87_RS00070 PF01368 DHH family JGY87_RS00075 PF03948 Ribosomal protein L9, C-terminal domain JGY87_RS00075 PF01281 Ribosomal protein L9, N-terminal domain JGY87_RS00080 PF00772 DnaB-like helicase N terminal domain JGY87_RS00080 PF03796 DnaB-like helicase C terminal domain JGY87_RS00085 PF00709 Adenylosuccinate synthetase JGY87_RS00090 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JGY87_RS00105 PF00072 Response regulator receiver domain JGY87_RS00105 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS00110 PF13426 PAS domain JGY87_RS00110 PF00512 His Kinase A (phospho-acceptor) domain JGY87_RS00110 PF14827 Double sensory domain of two-component sensor kinase JGY87_RS00110 PF00672 HAMP domain JGY87_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS00125 PF00753 Metallo-beta-lactamase superfamily JGY87_RS00130 PF02590 Predicted SPOUT methyltransferase JGY87_RS00160 PF00005 ABC transporter JGY87_RS00165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JGY87_RS00165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JGY87_RS00165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JGY87_RS00165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JGY87_RS00170 PF00483 Nucleotidyl transferase JGY87_RS00175 PF00534 Glycosyl transferases group 1 JGY87_RS00175 PF09318 Glycosyl transferase 1 domain A JGY87_RS00190 PF07563 Protein of unknown function (DUF1541) JGY87_RS00195 PF01925 Sulfite exporter TauE/SafE JGY87_RS00200 PF02583 Metal-sensitive transcriptional repressor JGY87_RS00205 PF13686 DsrE/DsrF/DrsH-like family JGY87_RS00210 PF00753 Metallo-beta-lactamase superfamily JGY87_RS00220 PF01451 Low molecular weight phosphotyrosine protein phosphatase JGY87_RS00225 PF02040 Arsenical pump membrane protein JGY87_RS00230 PF01022 Bacterial regulatory protein, arsR family JGY87_RS00265 PF02796 Helix-turn-helix domain of resolvase JGY87_RS00265 PF00239 Resolvase, N terminal domain JGY87_RS00285 PF02706 Chain length determinant protein JGY87_RS00285 PF13807 G-rich domain on putative tyrosine kinase JGY87_RS00290 PF13614 AAA domain JGY87_RS00300 PF02719 Polysaccharide biosynthesis protein JGY87_RS00305 PF00483 Nucleotidyl transferase JGY87_RS00320 PF00535 Glycosyl transferase family 2 JGY87_RS00330 PF01370 NAD dependent epimerase/dehydratase family JGY87_RS00340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JGY87_RS00340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JGY87_RS00340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JGY87_RS00345 PF00534 Glycosyl transferases group 1 JGY87_RS00345 PF13477 Glycosyl transferase 4-like JGY87_RS00350 PF02397 Bacterial sugar transferase JGY87_RS00355 PF00132 Bacterial transferase hexapeptide (six repeats) JGY87_RS00355 PF17836 PglD N-terminal domain JGY87_RS00360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JGY87_RS00365 PF03816 Cell envelope-related transcriptional attenuator domain JGY87_RS00370 PF00270 DEAD/DEAH box helicase JGY87_RS00370 PF00271 Helicase conserved C-terminal domain JGY87_RS00375 PF00293 NUDIX domain JGY87_RS00395 PF03466 LysR substrate binding domain JGY87_RS00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS00400 PF14537 Cytochrome c3 JGY87_RS00400 PF00890 FAD binding domain JGY87_RS00405 PF03401 Tripartite tricarboxylate transporter family receptor JGY87_RS00415 PF01970 Tripartite tricarboxylate transporter TctA family JGY87_RS00420 PF00890 FAD binding domain JGY87_RS00430 PF00455 DeoR C terminal sensor domain JGY87_RS00430 PF08220 DeoR-like helix-turn-helix domain JGY87_RS00435 PF00171 Aldehyde dehydrogenase family JGY87_RS00440 PF04962 KduI/IolB family JGY87_RS00445 PF00294 pfkB family carbohydrate kinase JGY87_RS00450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JGY87_RS00450 PF00205 Thiamine pyrophosphate enzyme, central domain JGY87_RS00450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JGY87_RS00455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JGY87_RS00455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JGY87_RS00460 PF01261 Xylose isomerase-like TIM barrel JGY87_RS00465 PF00474 Sodium:solute symporter family JGY87_RS00470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JGY87_RS00470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JGY87_RS00475 PF01116 Fructose-bisphosphate aldolase class-II JGY87_RS00480 PF14552 Tautomerase enzyme JGY87_RS00490 PF00106 short chain dehydrogenase JGY87_RS00495 PF04650 YSIRK type signal peptide JGY87_RS00505 PF00005 ABC transporter JGY87_RS00510 PF01613 Flavin reductase like domain JGY87_RS00515 PF07690 Major Facilitator Superfamily JGY87_RS00525 PF11066 Protein of unknown function (DUF2867) JGY87_RS00525 PF13460 NAD(P)H-binding JGY87_RS00530 PF03073 TspO/MBR family JGY87_RS00540 PF01593 Flavin containing amine oxidoreductase JGY87_RS00545 PF00535 Glycosyl transferase family 2 JGY87_RS00555 PF01593 Flavin containing amine oxidoreductase JGY87_RS00565 PF00875 DNA photolyase JGY87_RS00565 PF03441 FAD binding domain of DNA photolyase JGY87_RS00580 PF03123 CAT RNA binding domain JGY87_RS00580 PF00874 PRD domain JGY87_RS00585 PF02378 Phosphotransferase system, EIIC JGY87_RS00585 PF00367 phosphotransferase system, EIIB JGY87_RS00590 PF00232 Glycosyl hydrolase family 1 JGY87_RS00605 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JGY87_RS00610 PF02146 Sir2 family JGY87_RS00625 PF10100 Staphylopine dehydrogenase JGY87_RS00630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JGY87_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS00640 PF12911 N-terminal TM domain of oligopeptide transport permease C JGY87_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS00645 PF00005 ABC transporter JGY87_RS00650 PF00005 ABC transporter JGY87_RS00655 PF07690 Major Facilitator Superfamily JGY87_RS00675 PF03601 Conserved hypothetical protein 698 JGY87_RS00680 PF03466 LysR substrate binding domain JGY87_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS00685 PF02311 AraC-like ligand binding domain JGY87_RS00685 PF12833 Helix-turn-helix domain JGY87_RS00695 PF02929 Beta galactosidase small chain JGY87_RS00695 PF00703 Glycosyl hydrolases family 2 JGY87_RS00695 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JGY87_RS00695 PF02837 Glycosyl hydrolases family 2, sugar binding domain JGY87_RS00705 PF00005 ABC transporter JGY87_RS00715 PF01381 Helix-turn-helix JGY87_RS00725 PF03466 LysR substrate binding domain JGY87_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS00730 PF07690 Major Facilitator Superfamily JGY87_RS00735 PF00491 Arginase family JGY87_RS00740 PF07690 Major Facilitator Superfamily JGY87_RS00765 PF07690 Major Facilitator Superfamily JGY87_RS00770 PF00535 Glycosyl transferase family 2 JGY87_RS00785 PF02417 Chromate transporter JGY87_RS00790 PF03551 Transcriptional regulator PadR-like family JGY87_RS00800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JGY87_RS00800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JGY87_RS00805 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS00805 PF00107 Zinc-binding dehydrogenase JGY87_RS00815 PF00107 Zinc-binding dehydrogenase JGY87_RS00815 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS00820 PF03611 PTS system sugar-specific permease component JGY87_RS00825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JGY87_RS00840 PF00440 Bacterial regulatory proteins, tetR family JGY87_RS00840 PF18665 Tetracyclin repressor-like, C-terminal domain JGY87_RS00845 PF01757 Acyltransferase family JGY87_RS00850 PF01522 Polysaccharide deacetylase JGY87_RS00855 PF00535 Glycosyl transferase family 2 JGY87_RS00860 PF12282 Signal transduction histidine kinase JGY87_RS00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS00860 PF07568 Histidine kinase JGY87_RS00865 PF00072 Response regulator receiver domain JGY87_RS00865 PF03861 ANTAR domain JGY87_RS00870 PF04346 Ethanolamine utilisation protein, EutH JGY87_RS00880 PF00120 Glutamine synthetase, catalytic domain JGY87_RS00885 PF00171 Aldehyde dehydrogenase family JGY87_RS00890 PF01546 Peptidase family M20/M25/M40 JGY87_RS00890 PF07687 Peptidase dimerisation domain JGY87_RS00900 PF12867 DinB superfamily JGY87_RS00915 PF00072 Response regulator receiver domain JGY87_RS00915 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS00920 PF00512 His Kinase A (phospho-acceptor) domain JGY87_RS00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS00925 PF06737 Transglycosylase-like domain JGY87_RS00930 PF06737 Transglycosylase-like domain JGY87_RS00935 PF01872 RibD C-terminal domain JGY87_RS00945 PF17773 UPF0176 acylphosphatase like domain JGY87_RS00945 PF12368 Rhodanase C-terminal JGY87_RS00945 PF00581 Rhodanese-like domain JGY87_RS00950 PF01641 SelR domain JGY87_RS00950 PF01625 Peptide methionine sulfoxide reductase JGY87_RS00955 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS00960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS00960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS00965 PF00596 Class II Aldolase and Adducin N-terminal domain JGY87_RS00970 PF11762 L-arabinose isomerase C-terminal domain JGY87_RS00970 PF02610 L-arabinose isomerase JGY87_RS00975 PF00083 Sugar (and other) transporter JGY87_RS00985 PF00005 ABC transporter JGY87_RS00995 PF03551 Transcriptional regulator PadR-like family JGY87_RS00995 PF10400 Virulence activator alpha C-term JGY87_RS01000 PF05870 Phenolic acid decarboxylase (PAD) JGY87_RS01005 PF00083 Sugar (and other) transporter JGY87_RS01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS01015 PF01261 Xylose isomerase-like TIM barrel JGY87_RS01020 PF00480 ROK family JGY87_RS01040 PF02311 AraC-like ligand binding domain JGY87_RS01040 PF12833 Helix-turn-helix domain JGY87_RS01045 PF04650 YSIRK type signal peptide JGY87_RS01045 PF17041 E domain JGY87_RS01045 PF00746 LPXTG cell wall anchor motif JGY87_RS01045 PF07501 G5 domain JGY87_RS01055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS01055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS01060 PF02581 Thiamine monophosphate synthase JGY87_RS01065 PF01266 FAD dependent oxidoreductase JGY87_RS01075 PF05690 Thiazole biosynthesis protein ThiG JGY87_RS01080 PF00899 ThiF family JGY87_RS01085 PF03477 ATP cone domain JGY87_RS01085 PF13597 Anaerobic ribonucleoside-triphosphate reductase JGY87_RS01095 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JGY87_RS01105 PF03358 NADPH-dependent FMN reductase JGY87_RS01115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS01120 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS01120 PF07702 UTRA domain JGY87_RS01125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JGY87_RS01125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JGY87_RS01135 PF02447 GntP family permease JGY87_RS01150 PF04235 Protein of unknown function (DUF418) JGY87_RS01165 PF02548 Ketopantoate hydroxymethyltransferase JGY87_RS01170 PF02569 Pantoate-beta-alanine ligase JGY87_RS01175 PF06039 Malate:quinone oxidoreductase (Mqo) JGY87_RS01190 PF17210 SdrD B-like domain JGY87_RS01190 PF17961 Bacterial Ig domain JGY87_RS01190 PF04650 YSIRK type signal peptide JGY87_RS01190 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JGY87_RS01190 PF00746 LPXTG cell wall anchor motif JGY87_RS01195 PF00171 Aldehyde dehydrogenase family JGY87_RS01220 PF01207 Dihydrouridine synthase (Dus) JGY87_RS01225 PF07690 Major Facilitator Superfamily JGY87_RS01230 PF01551 Peptidase family M23 JGY87_RS01235 PF03009 Glycerophosphoryl diester phosphodiesterase family JGY87_RS01245 PF05552 Conserved TM helix JGY87_RS01250 PF01047 MarR family JGY87_RS01255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JGY87_RS01255 PF00205 Thiamine pyrophosphate enzyme, central domain JGY87_RS01255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JGY87_RS01260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JGY87_RS01265 PF00296 Luciferase-like monooxygenase JGY87_RS01270 PF01597 Glycine cleavage H-protein JGY87_RS01275 PF01661 Macro domain JGY87_RS01285 PF10437 Bacterial lipoate protein ligase C-terminus JGY87_RS01285 PF03099 Biotin/lipoate A/B protein ligase family JGY87_RS01295 PF11181 Heat induced stress protein YflT JGY87_RS01305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JGY87_RS01305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JGY87_RS01310 PF01969 Protein of unknown function DUF111 JGY87_RS01315 PF00731 AIR carboxylase JGY87_RS01320 PF02540 NAD synthase JGY87_RS01325 PF09861 Lactate racemase N-terminal domain JGY87_RS01330 PF03812 2-keto-3-deoxygluconate permease JGY87_RS01335 PF02595 Glycerate kinase family JGY87_RS01340 PF17853 GGDEF-like domain JGY87_RS01340 PF05651 Putative sugar diacid recognition JGY87_RS01340 PF13556 PucR C-terminal helix-turn-helix domain JGY87_RS01345 PF02896 PEP-utilising enzyme, TIM barrel domain JGY87_RS01345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JGY87_RS01345 PF00391 PEP-utilising enzyme, mobile domain JGY87_RS01350 PF03618 Kinase/pyrophosphorylase JGY87_RS01355 PF06983 3-demethylubiquinone-9 3-methyltransferase JGY87_RS01375 PF01381 Helix-turn-helix JGY87_RS01380 PF07690 Major Facilitator Superfamily JGY87_RS01385 PF13396 Phospholipase_D-nuclease N-terminal JGY87_RS01385 PF13091 PLD-like domain JGY87_RS01390 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS01390 PF00155 Aminotransferase class I and II JGY87_RS01395 PF00202 Aminotransferase class-III JGY87_RS01400 PF00171 Aldehyde dehydrogenase family JGY87_RS01405 PF13520 Amino acid permease JGY87_RS01415 PF00274 Fructose-bisphosphate aldolase class-I JGY87_RS01420 PF08241 Methyltransferase domain JGY87_RS01425 PF02028 BCCT, betaine/carnitine/choline family transporter JGY87_RS01435 PF00171 Aldehyde dehydrogenase family JGY87_RS01440 PF00732 GMC oxidoreductase JGY87_RS01440 PF05199 GMC oxidoreductase JGY87_RS01445 PF00535 Glycosyl transferase family 2 JGY87_RS01445 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS01455 PF00881 Nitroreductase family JGY87_RS01460 PF09587 Bacterial capsule synthesis protein PGA_cap JGY87_RS01465 PF01156 Inosine-uridine preferring nucleoside hydrolase JGY87_RS01470 PF07690 Major Facilitator Superfamily JGY87_RS01475 PF13520 Amino acid permease JGY87_RS01480 PF00202 Aminotransferase class-III JGY87_RS01485 PF02774 Semialdehyde dehydrogenase, dimerisation domain JGY87_RS01485 PF01118 Semialdehyde dehydrogenase, NAD binding domain JGY87_RS01490 PF01960 ArgJ family JGY87_RS01495 PF00696 Amino acid kinase family JGY87_RS01500 PF07687 Peptidase dimerisation domain JGY87_RS01500 PF01546 Peptidase family M20/M25/M40 JGY87_RS01510 PF03358 NADPH-dependent FMN reductase JGY87_RS01525 PF02447 GntP family permease JGY87_RS01530 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS01530 PF00107 Zinc-binding dehydrogenase JGY87_RS01535 PF02652 L-lactate permease JGY87_RS01540 PF07690 Major Facilitator Superfamily JGY87_RS01545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JGY87_RS01545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JGY87_RS01550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JGY87_RS01550 PF00367 phosphotransferase system, EIIB JGY87_RS01550 PF02378 Phosphotransferase system, EIIC JGY87_RS01555 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JGY87_RS01560 PF07670 Nucleoside recognition JGY87_RS01560 PF07662 Na+ dependent nucleoside transporter C-terminus JGY87_RS01560 PF01773 Na+ dependent nucleoside transporter N-terminus JGY87_RS01565 PF04227 Indigoidine synthase A like protein JGY87_RS01575 PF00497 Bacterial extracellular solute-binding proteins, family 3 JGY87_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS01585 PF00005 ABC transporter JGY87_RS01590 PF08279 HTH domain JGY87_RS01590 PF05043 Mga helix-turn-helix domain JGY87_RS01590 PF00874 PRD domain JGY87_RS01590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS01590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JGY87_RS01595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS01605 PF03611 PTS system sugar-specific permease component JGY87_RS01620 PF08546 Ketopantoate reductase PanE/ApbA C terminal JGY87_RS01620 PF02558 Ketopantoate reductase PanE/ApbA JGY87_RS01630 PF03180 NLPA lipoprotein JGY87_RS01635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JGY87_RS01635 PF00056 lactate/malate dehydrogenase, NAD binding domain JGY87_RS01640 PF00975 Thioesterase domain JGY87_RS01640 PF00501 AMP-binding enzyme JGY87_RS01640 PF00550 Phosphopantetheine attachment site JGY87_RS01640 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS01640 PF00668 Condensation domain JGY87_RS01645 PF07993 Male sterility protein JGY87_RS01645 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS01645 PF00668 Condensation domain JGY87_RS01645 PF00550 Phosphopantetheine attachment site JGY87_RS01645 PF00501 AMP-binding enzyme JGY87_RS01655 PF08279 HTH domain JGY87_RS01655 PF05043 Mga helix-turn-helix domain JGY87_RS01655 PF00874 PRD domain JGY87_RS01655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS01660 PF02378 Phosphotransferase system, EIIC JGY87_RS01660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JGY87_RS01660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS01665 PF01238 Phosphomannose isomerase type I JGY87_RS01670 PF00480 ROK family JGY87_RS01685 PF01053 Cys/Met metabolism PLP-dependent enzyme JGY87_RS01690 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS01695 PF01053 Cys/Met metabolism PLP-dependent enzyme JGY87_RS01720 PF01774 UreD urease accessory protein JGY87_RS01725 PF02492 CobW/HypB/UreG, nucleotide-binding domain JGY87_RS01730 PF01730 UreF JGY87_RS01735 PF02814 UreE urease accessory protein, N-terminal domain JGY87_RS01735 PF05194 UreE urease accessory protein, C-terminal domain JGY87_RS01740 PF00449 Urease alpha-subunit, N-terminal domain JGY87_RS01740 PF01979 Amidohydrolase family JGY87_RS01745 PF00699 Urease beta subunit JGY87_RS01750 PF00547 Urease, gamma subunit JGY87_RS01755 PF03253 Urea transporter JGY87_RS01760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JGY87_RS01765 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS01770 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS01775 PF00005 ABC transporter JGY87_RS01780 PF00005 ABC transporter JGY87_RS01785 PF01497 Periplasmic binding protein JGY87_RS01795 PF13520 Amino acid permease JGY87_RS01805 PF00753 Metallo-beta-lactamase superfamily JGY87_RS01825 PF01180 Dihydroorotate dehydrogenase JGY87_RS01830 PF03881 Fructosamine kinase JGY87_RS01835 PF05979 Bacterial protein of unknown function (DUF896) JGY87_RS01855 PF13536 Putative multidrug resistance efflux transporter JGY87_RS01860 PF00324 Amino acid permease JGY87_RS01870 PF01551 Peptidase family M23 JGY87_RS01875 PF04343 Protein of unknown function, DUF488 JGY87_RS01895 PF00155 Aminotransferase class I and II JGY87_RS01900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JGY87_RS01900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS01905 PF00403 Heavy-metal-associated domain JGY87_RS01910 PF00403 Heavy-metal-associated domain JGY87_RS01915 PF00916 Sulfate permease family JGY87_RS01915 PF01740 STAS domain JGY87_RS01920 PF00005 ABC transporter JGY87_RS01925 PF02687 FtsX-like permease family JGY87_RS01940 PF00939 Sodium:sulfate symporter transmembrane region JGY87_RS01945 PF05684 Protein of unknown function (DUF819) JGY87_RS01950 PF12464 Maltose acetyltransferase JGY87_RS01950 PF14602 Hexapeptide repeat of succinyl-transferase JGY87_RS01950 PF00132 Bacterial transferase hexapeptide (six repeats) JGY87_RS01960 PF07286 Protein of unknown function (DUF1445) JGY87_RS01975 PF00171 Aldehyde dehydrogenase family JGY87_RS01990 PF12833 Helix-turn-helix domain JGY87_RS01995 PF07690 Major Facilitator Superfamily JGY87_RS02000 PF07687 Peptidase dimerisation domain JGY87_RS02000 PF01546 Peptidase family M20/M25/M40 JGY87_RS02015 PF07690 Major Facilitator Superfamily JGY87_RS02025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JGY87_RS02025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JGY87_RS02030 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JGY87_RS02030 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JGY87_RS02035 PF00108 Thiolase, N-terminal domain JGY87_RS02035 PF02803 Thiolase, C-terminal domain JGY87_RS02040 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JGY87_RS02045 PF08450 SMP-30/Gluconolactonase/LRE-like region JGY87_RS02050 PF01476 LysM domain JGY87_RS02050 PF05257 CHAP domain JGY87_RS02055 PF03553 Na+/H+ antiporter family JGY87_RS02060 PF03466 LysR substrate binding domain JGY87_RS02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS02065 PF03788 LrgA family JGY87_RS02070 PF04172 LrgB-like family JGY87_RS02075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JGY87_RS02075 PF00205 Thiamine pyrophosphate enzyme, central domain JGY87_RS02075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JGY87_RS02080 PF03606 C4-dicarboxylate anaerobic carrier JGY87_RS02085 PF02378 Phosphotransferase system, EIIC JGY87_RS02085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JGY87_RS02085 PF00367 phosphotransferase system, EIIB JGY87_RS02100 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS02120 PF00934 PE family JGY87_RS02120 PF07859 alpha/beta hydrolase fold JGY87_RS02125 PF01546 Peptidase family M20/M25/M40 JGY87_RS02125 PF07687 Peptidase dimerisation domain JGY87_RS02135 PF08245 Mur ligase middle domain JGY87_RS02140 PF14102 Capsule biosynthesis CapC JGY87_RS02145 PF09587 Bacterial capsule synthesis protein PGA_cap JGY87_RS02160 PF00202 Aminotransferase class-III JGY87_RS02165 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JGY87_RS02170 PF00107 Zinc-binding dehydrogenase JGY87_RS02170 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS02175 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS02180 PF00535 Glycosyl transferase family 2 JGY87_RS02180 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JGY87_RS02195 PF00005 ABC transporter JGY87_RS02210 PF13419 Haloacid dehalogenase-like hydrolase JGY87_RS02215 PF01546 Peptidase family M20/M25/M40 JGY87_RS02215 PF07687 Peptidase dimerisation domain JGY87_RS02225 PF04203 Sortase domain JGY87_RS02230 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JGY87_RS02235 PF01380 SIS domain JGY87_RS02240 PF00480 ROK family JGY87_RS02245 PF00701 Dihydrodipicolinate synthetase family JGY87_RS02250 PF00474 Sodium:solute symporter family JGY87_RS02270 PF02525 Flavodoxin-like fold JGY87_RS02280 PF00881 Nitroreductase family JGY87_RS02285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS02295 PF00005 ABC transporter JGY87_RS02295 PF00664 ABC transporter transmembrane region JGY87_RS02300 PF00005 ABC transporter JGY87_RS02300 PF00664 ABC transporter transmembrane region JGY87_RS02310 PF01297 Zinc-uptake complex component A periplasmic JGY87_RS02315 PF00171 Aldehyde dehydrogenase family JGY87_RS02320 PF01047 MarR family JGY87_RS02325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS02330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS02335 PF01738 Dienelactone hydrolase family JGY87_RS02345 PF00939 Sodium:sulfate symporter transmembrane region JGY87_RS02360 PF06874 Firmicute fructose-1,6-bisphosphatase JGY87_RS02365 PF00474 Sodium:solute symporter family JGY87_RS02370 PF09335 SNARE associated Golgi protein JGY87_RS02375 PF07690 Major Facilitator Superfamily JGY87_RS02385 PF03306 Alpha-acetolactate decarboxylase JGY87_RS02390 PF12805 FUSC-like inner membrane protein yccS JGY87_RS02405 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JGY87_RS02410 PF04607 Region found in RelA / SpoT proteins JGY87_RS02420 PF07729 FCD domain JGY87_RS02420 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS02425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS02425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS02430 PF02447 GntP family permease JGY87_RS02445 PF12833 Helix-turn-helix domain JGY87_RS02455 PF02837 Glycosyl hydrolases family 2, sugar binding domain JGY87_RS02455 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JGY87_RS02455 PF00703 Glycosyl hydrolases family 2 JGY87_RS02460 PF00933 Glycosyl hydrolase family 3 N terminal domain JGY87_RS02480 PF02614 Glucuronate isomerase JGY87_RS02485 PF03786 D-mannonate dehydratase (UxuA) JGY87_RS02500 PF00106 short chain dehydrogenase JGY87_RS02530 PF01502 Phosphoribosyl-AMP cyclohydrolase JGY87_RS02530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JGY87_RS02535 PF00977 Histidine biosynthesis protein JGY87_RS02540 PF00977 Histidine biosynthesis protein JGY87_RS02545 PF00117 Glutamine amidotransferase class-I JGY87_RS02550 PF00475 Imidazoleglycerol-phosphate dehydratase JGY87_RS02555 PF00155 Aminotransferase class I and II JGY87_RS02560 PF00815 Histidinol dehydrogenase JGY87_RS02565 PF01634 ATP phosphoribosyltransferase JGY87_RS02570 PF13393 Histidyl-tRNA synthetase JGY87_RS02575 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS02580 PF17941 Polyphosphate kinase C-terminal domain 1 JGY87_RS02580 PF02503 Polyphosphate kinase middle domain JGY87_RS02580 PF13090 Polyphosphate kinase C-terminal domain 2 JGY87_RS02580 PF13089 Polyphosphate kinase N-terminal domain JGY87_RS02585 PF02541 Ppx/GppA phosphatase family JGY87_RS02590 PF03806 AbgT putative transporter family JGY87_RS02600 PF05343 M42 glutamyl aminopeptidase JGY87_RS02610 PF01645 Conserved region in glutamate synthase JGY87_RS02620 PF00005 ABC transporter JGY87_RS02625 PF03649 Uncharacterised protein family (UPF0014) JGY87_RS02630 PF07690 Major Facilitator Superfamily JGY87_RS02635 PF03600 Citrate transporter JGY87_RS02640 PF13520 Amino acid permease JGY87_RS02650 PF08361 MAATS-type transcriptional repressor, C-terminal region JGY87_RS02650 PF00440 Bacterial regulatory proteins, tetR family JGY87_RS02655 PF05853 beta-keto acid cleavage enzyme JGY87_RS02660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JGY87_RS02660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JGY87_RS02670 PF00005 ABC transporter JGY87_RS02670 PF00571 CBS domain JGY87_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS02680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JGY87_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS02695 PF04172 LrgB-like family JGY87_RS02700 PF03788 LrgA family JGY87_RS02705 PF04397 LytTr DNA-binding domain JGY87_RS02705 PF00072 Response regulator receiver domain JGY87_RS02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS02710 PF13492 GAF domain JGY87_RS02710 PF07694 5TMR of 5TMR-LYT JGY87_RS02710 PF06580 Histidine kinase JGY87_RS02715 PF07690 Major Facilitator Superfamily JGY87_RS02720 PF01546 Peptidase family M20/M25/M40 JGY87_RS02740 PF01470 Pyroglutamyl peptidase JGY87_RS02750 PF02096 60Kd inner membrane protein JGY87_RS02755 PF00999 Sodium/hydrogen exchanger family JGY87_RS02775 PF07690 Major Facilitator Superfamily JGY87_RS02785 PF01545 Cation efflux family JGY87_RS02785 PF16916 Dimerisation domain of Zinc Transporter JGY87_RS02795 PF00300 Histidine phosphatase superfamily (branch 1) JGY87_RS02805 PF07690 Major Facilitator Superfamily JGY87_RS02820 PF13462 Thioredoxin JGY87_RS02825 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JGY87_RS02825 PF01297 Zinc-uptake complex component A periplasmic JGY87_RS02830 PF04264 YceI-like domain JGY87_RS02840 PF03551 Transcriptional regulator PadR-like family JGY87_RS02860 PF00232 Glycosyl hydrolase family 1 JGY87_RS02865 PF00367 phosphotransferase system, EIIB JGY87_RS02865 PF02378 Phosphotransferase system, EIIC JGY87_RS02865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JGY87_RS02870 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS02870 PF07702 UTRA domain JGY87_RS02875 PF01226 Formate/nitrite transporter JGY87_RS02880 PF00583 Acetyltransferase (GNAT) family JGY87_RS02890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JGY87_RS02890 PF14824 Sirohaem biosynthesis protein central JGY87_RS02890 PF10414 Sirohaem synthase dimerisation region JGY87_RS02895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JGY87_RS02895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS02895 PF18267 Rubredoxin NAD+ reductase C-terminal domain JGY87_RS02895 PF04324 BFD-like [2Fe-2S] binding domain JGY87_RS02895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JGY87_RS02900 PF00355 Rieske [2Fe-2S] domain JGY87_RS02905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JGY87_RS02910 PF04650 YSIRK type signal peptide JGY87_RS02910 PF04650 YSIRK type signal peptide JGY87_RS02915 PF00384 Molybdopterin oxidoreductase JGY87_RS02915 PF01568 Molydopterin dinucleotide binding domain JGY87_RS02915 PF14710 Respiratory nitrate reductase alpha N-terminal JGY87_RS02920 PF14711 Respiratory nitrate reductase beta C-terminal JGY87_RS02920 PF13247 4Fe-4S dicluster domain JGY87_RS02930 PF02665 Nitrate reductase gamma subunit JGY87_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS02940 PF07730 Histidine kinase JGY87_RS02945 PF00196 Bacterial regulatory proteins, luxR family JGY87_RS02945 PF00072 Response regulator receiver domain JGY87_RS02950 PF07690 Major Facilitator Superfamily JGY87_RS02955 PF00011 Hsp20/alpha crystallin family JGY87_RS02965 PF01047 MarR family JGY87_RS02985 PF08460 Bacterial SH3 domain JGY87_RS02985 PF05257 CHAP domain JGY87_RS02985 PF01510 N-acetylmuramoyl-L-alanine amidase JGY87_RS02990 PF02378 Phosphotransferase system, EIIC JGY87_RS02990 PF00367 phosphotransferase system, EIIB JGY87_RS03010 PF02690 Na+/Pi-cotransporter JGY87_RS03020 PF00296 Luciferase-like monooxygenase JGY87_RS03025 PF00296 Luciferase-like monooxygenase JGY87_RS03030 PF03606 C4-dicarboxylate anaerobic carrier JGY87_RS03035 PF00455 DeoR C terminal sensor domain JGY87_RS03035 PF08220 DeoR-like helix-turn-helix domain JGY87_RS03040 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS03040 PF00107 Zinc-binding dehydrogenase JGY87_RS03045 PF02733 Dak1 domain JGY87_RS03050 PF02734 DAK2 domain JGY87_RS03055 PF02502 Ribose/Galactose Isomerase JGY87_RS03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS03075 PF00083 Sugar (and other) transporter JGY87_RS03080 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS03080 PF00107 Zinc-binding dehydrogenase JGY87_RS03085 PF13673 Acetyltransferase (GNAT) domain JGY87_RS03095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS03100 PF02652 L-lactate permease JGY87_RS03105 PF00534 Glycosyl transferases group 1 JGY87_RS03105 PF13439 Glycosyltransferase Family 4 JGY87_RS03110 PF06039 Malate:quinone oxidoreductase (Mqo) JGY87_RS03115 PF00512 His Kinase A (phospho-acceptor) domain JGY87_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS03115 PF00672 HAMP domain JGY87_RS03120 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS03120 PF00072 Response regulator receiver domain JGY87_RS03125 PF02687 FtsX-like permease family JGY87_RS03130 PF00005 ABC transporter JGY87_RS03140 PF12802 MarR family JGY87_RS03150 PF07690 Major Facilitator Superfamily JGY87_RS03165 PF07690 Major Facilitator Superfamily JGY87_RS03190 PF01544 CorA-like Mg2+ transporter protein JGY87_RS03195 PF01070 FMN-dependent dehydrogenase JGY87_RS03200 PF03616 Sodium/glutamate symporter JGY87_RS03205 PF03553 Na+/H+ antiporter family JGY87_RS03210 PF02245 Methylpurine-DNA glycosylase (MPG) JGY87_RS03215 PF05656 Protein of unknown function (DUF805) JGY87_RS03220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS03220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS03225 PF00005 ABC transporter JGY87_RS03225 PF13732 Domain of unknown function (DUF4162) JGY87_RS03235 PF01263 Aldose 1-epimerase JGY87_RS03240 PF03475 3-alpha domain JGY87_RS03240 PF03473 MOSC domain JGY87_RS03245 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JGY87_RS03255 PF00491 Arginase family JGY87_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS03260 PF03466 LysR substrate binding domain JGY87_RS03265 PF07670 Nucleoside recognition JGY87_RS03270 PF01175 Urocanase Rossmann-like domain JGY87_RS03270 PF17392 Urocanase C-terminal domain JGY87_RS03270 PF17391 Urocanase N-terminal domain JGY87_RS03275 PF01979 Amidohydrolase family JGY87_RS03280 PF00916 Sulfate permease family JGY87_RS03280 PF01740 STAS domain JGY87_RS03285 PF07687 Peptidase dimerisation domain JGY87_RS03285 PF01546 Peptidase family M20/M25/M40 JGY87_RS03295 PF01613 Flavin reductase like domain JGY87_RS03310 PF01380 SIS domain JGY87_RS03310 PF01418 Helix-turn-helix domain, rpiR family JGY87_RS03315 PF00367 phosphotransferase system, EIIB JGY87_RS03315 PF02378 Phosphotransferase system, EIIC JGY87_RS03325 PF01758 Sodium Bile acid symporter family JGY87_RS03330 PF13419 Haloacid dehalogenase-like hydrolase JGY87_RS03355 PF00324 Amino acid permease JGY87_RS03360 PF00245 Alkaline phosphatase JGY87_RS03370 PF02378 Phosphotransferase system, EIIC JGY87_RS03370 PF00367 phosphotransferase system, EIIB JGY87_RS03375 PF01380 SIS domain JGY87_RS03395 PF00459 Inositol monophosphatase family JGY87_RS03400 PF03816 Cell envelope-related transcriptional attenuator domain JGY87_RS03405 PF12838 4Fe-4S dicluster domain JGY87_RS03405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JGY87_RS03405 PF00384 Molybdopterin oxidoreductase JGY87_RS03405 PF01568 Molydopterin dinucleotide binding domain JGY87_RS03405 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JGY87_RS03425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JGY87_RS03425 PF13457 GW (Gly-Tryp) dipeptide domain JGY87_RS03430 PF01494 FAD binding domain JGY87_RS03435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS03435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JGY87_RS03440 PF00893 Small Multidrug Resistance protein JGY87_RS03445 PF00893 Small Multidrug Resistance protein JGY87_RS03450 PF05257 CHAP domain JGY87_RS03460 PF02558 Ketopantoate reductase PanE/ApbA JGY87_RS03460 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain JGY87_RS03465 PF03553 Na+/H+ antiporter family JGY87_RS03470 PF05257 CHAP domain JGY87_RS03495 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS03500 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS03505 PF00497 Bacterial extracellular solute-binding proteins, family 3 JGY87_RS03510 PF00005 ABC transporter JGY87_RS03515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JGY87_RS03515 PF02770 Acyl-CoA dehydrogenase, middle domain JGY87_RS03515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JGY87_RS03520 PF01497 Periplasmic binding protein JGY87_RS03525 PF02632 BioY family JGY87_RS03535 PF02634 FdhD/NarQ family JGY87_RS03540 PF00356 Bacterial regulatory proteins, lacI family JGY87_RS03545 PF10509 Galactokinase galactose-binding signature JGY87_RS03545 PF08544 GHMP kinases C terminal JGY87_RS03545 PF00288 GHMP kinases N terminal domain JGY87_RS03550 PF16363 GDP-mannose 4,6 dehydratase JGY87_RS03555 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JGY87_RS03555 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JGY87_RS03565 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS03570 PF03459 TOBE domain JGY87_RS03570 PF00005 ABC transporter JGY87_RS03580 PF00899 ThiF family JGY87_RS03585 PF00994 Probable molybdopterin binding domain JGY87_RS03590 PF01967 MoaC family JGY87_RS03595 PF00994 Probable molybdopterin binding domain JGY87_RS03595 PF03454 MoeA C-terminal region (domain IV) JGY87_RS03595 PF03453 MoeA N-terminal region (domain I and II) JGY87_RS03605 PF02391 MoaE protein JGY87_RS03610 PF02597 ThiS family JGY87_RS03615 PF12804 MobA-like NTP transferase domain JGY87_RS03620 PF04055 Radical SAM superfamily JGY87_RS03620 PF06463 Molybdenum Cofactor Synthesis C JGY87_RS03625 PF01047 MarR family JGY87_RS03635 PF01047 MarR family JGY87_RS03645 PF02388 FemAB family JGY87_RS03650 PF00873 AcrB/AcrD/AcrF family JGY87_RS03675 PF06800 Sugar transport protein JGY87_RS03685 PF01131 DNA topoisomerase JGY87_RS03685 PF01751 Toprim domain JGY87_RS03690 PF00860 Permease family JGY87_RS03700 PF00338 Ribosomal protein S10p/S20e JGY87_RS03705 PF00297 Ribosomal protein L3 JGY87_RS03710 PF00573 Ribosomal protein L4/L1 family JGY87_RS03715 PF00276 Ribosomal protein L23 JGY87_RS03720 PF00181 Ribosomal Proteins L2, RNA binding domain JGY87_RS03720 PF03947 Ribosomal Proteins L2, C-terminal domain JGY87_RS03725 PF00203 Ribosomal protein S19 JGY87_RS03730 PF00237 Ribosomal protein L22p/L17e JGY87_RS03735 PF07650 KH domain JGY87_RS03735 PF00189 Ribosomal protein S3, C-terminal domain JGY87_RS03740 PF00252 Ribosomal protein L16p/L10e JGY87_RS03745 PF00831 Ribosomal L29 protein JGY87_RS03750 PF00366 Ribosomal protein S17 JGY87_RS03755 PF00238 Ribosomal protein L14p/L23e JGY87_RS03760 PF00467 KOW motif JGY87_RS03760 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JGY87_RS03765 PF00673 ribosomal L5P family C-terminus JGY87_RS03765 PF00281 Ribosomal protein L5 JGY87_RS03770 PF00253 Ribosomal protein S14p/S29e JGY87_RS03775 PF00410 Ribosomal protein S8 JGY87_RS03780 PF00347 Ribosomal protein L6 JGY87_RS03785 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JGY87_RS03790 PF00333 Ribosomal protein S5, N-terminal domain JGY87_RS03790 PF03719 Ribosomal protein S5, C-terminal domain JGY87_RS03795 PF00327 Ribosomal protein L30p/L7e JGY87_RS03800 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JGY87_RS03805 PF00344 SecY translocase JGY87_RS03810 PF05191 Adenylate kinase, active site lid JGY87_RS03815 PF01176 Translation initiation factor 1A / IF-1 JGY87_RS03820 PF00444 Ribosomal protein L36 JGY87_RS03825 PF00416 Ribosomal protein S13/S18 JGY87_RS03830 PF00411 Ribosomal protein S11 JGY87_RS03835 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JGY87_RS03835 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JGY87_RS03835 PF01000 RNA polymerase Rpb3/RpoA insert domain JGY87_RS03840 PF01196 Ribosomal protein L17 JGY87_RS03845 PF00005 ABC transporter JGY87_RS03850 PF00005 ABC transporter JGY87_RS03855 PF02361 Cobalt transport protein JGY87_RS03860 PF01416 tRNA pseudouridine synthase JGY87_RS03865 PF00572 Ribosomal protein L13 JGY87_RS03870 PF00380 Ribosomal protein S9/S16 JGY87_RS03880 PF00296 Luciferase-like monooxygenase JGY87_RS03885 PF16884 N-terminal domain of oxidoreductase JGY87_RS03885 PF00107 Zinc-binding dehydrogenase JGY87_RS03890 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS03890 PF00107 Zinc-binding dehydrogenase JGY87_RS03895 PF02028 BCCT, betaine/carnitine/choline family transporter JGY87_RS03910 PF03780 Asp23 family, cell envelope-related function JGY87_RS03915 PF04183 IucA / IucC family JGY87_RS03915 PF06276 Ferric iron reductase FhuF-like transporter JGY87_RS03920 PF05977 Transmembrane secretion effector JGY87_RS03925 PF06276 Ferric iron reductase FhuF-like transporter JGY87_RS03925 PF04183 IucA / IucC family JGY87_RS03930 PF01168 Alanine racemase, N-terminal domain JGY87_RS03935 PF01497 Periplasmic binding protein JGY87_RS03940 PF01032 FecCD transport family JGY87_RS03945 PF01032 FecCD transport family JGY87_RS03950 PF07670 Nucleoside recognition JGY87_RS03955 PF03992 Antibiotic biosynthesis monooxygenase JGY87_RS03965 PF04307 LexA-binding, inner membrane-associated putative hydrolase JGY87_RS03970 PF01704 UTP--glucose-1-phosphate uridylyltransferase JGY87_RS03975 PF03006 Haemolysin-III related JGY87_RS03980 PF07690 Major Facilitator Superfamily JGY87_RS03985 PF17080 Multidrug Resistance efflux pump JGY87_RS03990 PF10609 NUBPL iron-transfer P-loop NTPase JGY87_RS04040 PF00491 Arginase family JGY87_RS04045 PF02457 DisA bacterial checkpoint controller nucleotide-binding JGY87_RS04055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JGY87_RS04055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JGY87_RS04055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JGY87_RS04055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JGY87_RS04060 PF01232 Mannitol dehydrogenase Rossmann domain JGY87_RS04060 PF08125 Mannitol dehydrogenase C-terminal domain JGY87_RS04065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS04070 PF05043 Mga helix-turn-helix domain JGY87_RS04070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS04070 PF00874 PRD domain JGY87_RS04070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JGY87_RS04070 PF08279 HTH domain JGY87_RS04075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JGY87_RS04075 PF02378 Phosphotransferase system, EIIC JGY87_RS04080 PF01380 SIS domain JGY87_RS04090 PF00005 ABC transporter JGY87_RS04110 PF16916 Dimerisation domain of Zinc Transporter JGY87_RS04110 PF01545 Cation efflux family JGY87_RS04115 PF01022 Bacterial regulatory protein, arsR family JGY87_RS04120 PF13460 NAD(P)H-binding JGY87_RS04125 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS04125 PF07729 FCD domain JGY87_RS04130 PF01238 Phosphomannose isomerase type I JGY87_RS04140 PF03601 Conserved hypothetical protein 698 JGY87_RS04155 PF00294 pfkB family carbohydrate kinase JGY87_RS04160 PF00210 Ferritin-like domain JGY87_RS04165 PF01048 Phosphorylase superfamily JGY87_RS04170 PF01791 DeoC/LacD family aldolase JGY87_RS04175 PF02885 Glycosyl transferase family, helical bundle domain JGY87_RS04175 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JGY87_RS04175 PF00591 Glycosyl transferase family, a/b domain JGY87_RS04180 PF01676 Metalloenzyme superfamily JGY87_RS04190 PF02664 S-Ribosylhomocysteinase (LuxS) JGY87_RS04210 PF03630 Fumble JGY87_RS04220 PF05066 HB1, ASXL, restriction endonuclease HTH domain JGY87_RS04225 PF06418 CTP synthase N-terminus JGY87_RS04225 PF00117 Glutamine amidotransferase class-I JGY87_RS04230 PF01116 Fructose-bisphosphate aldolase class-II JGY87_RS04235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JGY87_RS04245 PF00171 Aldehyde dehydrogenase family JGY87_RS04250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JGY87_RS04250 PF07498 Rho termination factor, N-terminal domain JGY87_RS04250 PF07497 Rho termination factor, RNA-binding domain JGY87_RS04255 PF01197 Ribosomal protein L31 JGY87_RS04260 PF00265 Thymidine kinase JGY87_RS04265 PF00472 RF-1 domain JGY87_RS04265 PF03462 PCRF domain JGY87_RS04270 PF05175 Methyltransferase small domain JGY87_RS04270 PF17827 PrmC N-terminal domain JGY87_RS04275 PF03481 Putative GTP-binding controlling metal-binding JGY87_RS04275 PF01300 Telomere recombination JGY87_RS04280 PF01451 Low molecular weight phosphotyrosine protein phosphatase JGY87_RS04285 PF04260 Protein of unknown function (DUF436) JGY87_RS04290 PF00464 Serine hydroxymethyltransferase JGY87_RS04300 PF02350 UDP-N-acetylglucosamine 2-epimerase JGY87_RS04310 PF00119 ATP synthase A chain JGY87_RS04315 PF00137 ATP synthase subunit C JGY87_RS04320 PF00430 ATP synthase B/B' CF(0) JGY87_RS04325 PF00213 ATP synthase delta (OSCP) subunit JGY87_RS04330 PF02874 ATP synthase alpha/beta family, beta-barrel domain JGY87_RS04330 PF00306 ATP synthase alpha/beta chain, C terminal domain JGY87_RS04330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JGY87_RS04335 PF00231 ATP synthase JGY87_RS04340 PF02874 ATP synthase alpha/beta family, beta-barrel domain JGY87_RS04340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JGY87_RS04345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JGY87_RS04345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JGY87_RS04355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JGY87_RS04360 PF07977 FabA-like domain JGY87_RS04370 PF00436 Single-strand binding protein family JGY87_RS04375 PF06737 Transglycosylase-like domain JGY87_RS04380 PF03070 TENA/THI-4/PQQC family JGY87_RS04385 PF08543 Phosphomethylpyrimidine kinase JGY87_RS04390 PF02110 Hydroxyethylthiazole kinase family JGY87_RS04395 PF02581 Thiamine monophosphate synthase JGY87_RS04400 PF02096 60Kd inner membrane protein JGY87_RS04405 PF01966 HD domain JGY87_RS04410 PF13396 Phospholipase_D-nuclease N-terminal JGY87_RS04410 PF13091 PLD-like domain JGY87_RS04415 PF02583 Metal-sensitive transcriptional repressor JGY87_RS04430 PF01098 Cell cycle protein JGY87_RS04435 PF07478 D-ala D-ala ligase C-terminus JGY87_RS04435 PF01820 D-ala D-ala ligase N-terminus JGY87_RS04440 PF01225 Mur ligase family, catalytic domain JGY87_RS04440 PF02875 Mur ligase family, glutamate ligase domain JGY87_RS04440 PF08245 Mur ligase middle domain JGY87_RS04445 PF00270 DEAD/DEAH box helicase JGY87_RS04445 PF00271 Helicase conserved C-terminal domain JGY87_RS04455 PF03703 Bacterial PH domain JGY87_RS04465 PF01648 4'-phosphopantetheinyl transferase superfamily JGY87_RS04470 PF00842 Alanine racemase, C-terminal domain JGY87_RS04470 PF01168 Alanine racemase, N-terminal domain JGY87_RS04480 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JGY87_RS04485 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JGY87_RS04485 PF07228 Stage II sporulation protein E (SpoIIE) JGY87_RS04490 PF01740 STAS domain JGY87_RS04495 PF13581 Histidine kinase-like ATPase domain JGY87_RS04500 PF04542 Sigma-70 region 2 JGY87_RS04500 PF04539 Sigma-70 region 3 JGY87_RS04500 PF04545 Sigma-70, region 4 JGY87_RS04505 PF17674 HHH domain JGY87_RS04505 PF00575 S1 RNA binding domain JGY87_RS04505 PF09371 Tex-like protein N-terminal domain JGY87_RS04505 PF16921 Tex protein YqgF-like domain JGY87_RS04510 PF10263 SprT-like family JGY87_RS04510 PF17283 SprT-like zinc ribbon domain JGY87_RS04540 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS04540 PF00585 C-terminal regulatory domain of Threonine dehydratase JGY87_RS04545 PF00694 Aconitase C-terminal domain JGY87_RS04550 PF00330 Aconitase family (aconitate hydratase) JGY87_RS04555 PF00180 Isocitrate/isopropylmalate dehydrogenase JGY87_RS04560 PF00682 HMGL-like JGY87_RS04560 PF08502 LeuA allosteric (dimerisation) domain JGY87_RS04565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JGY87_RS04565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JGY87_RS04570 PF01842 ACT domain JGY87_RS04570 PF10369 Small subunit of acetolactate synthase JGY87_RS04575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JGY87_RS04575 PF00205 Thiamine pyrophosphate enzyme, central domain JGY87_RS04575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JGY87_RS04580 PF00920 Dehydratase family JGY87_RS04585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JGY87_RS04590 PF00814 Glycoprotease family JGY87_RS04595 PF00583 Acetyltransferase (GNAT) family JGY87_RS04600 PF00814 Glycoprotease family JGY87_RS04610 PF00488 MutS domain V JGY87_RS04610 PF05190 MutS family domain IV JGY87_RS04610 PF05192 MutS domain III JGY87_RS04610 PF01624 MutS domain I JGY87_RS04610 PF05188 MutS domain II JGY87_RS04615 PF12848 ABC transporter JGY87_RS04615 PF00005 ABC transporter JGY87_RS04615 PF16326 ABC transporter C-terminal domain JGY87_RS04620 PF02629 CoA binding domain JGY87_RS04620 PF06971 Putative DNA-binding protein N-terminus JGY87_RS04625 PF04143 Sulphur transport JGY87_RS04630 PF01206 Sulfurtransferase TusA JGY87_RS04635 PF13407 Periplasmic binding protein domain JGY87_RS04635 PF00356 Bacterial regulatory proteins, lacI family JGY87_RS04640 PF08244 Glycosyl hydrolases family 32 C terminal JGY87_RS04640 PF00251 Glycosyl hydrolases family 32 N-terminal domain JGY87_RS04645 PF00294 pfkB family carbohydrate kinase JGY87_RS04650 PF00072 Response regulator receiver domain JGY87_RS04650 PF04397 LytTr DNA-binding domain JGY87_RS04655 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JGY87_RS04655 PF17203 Single cache domain 3 JGY87_RS04655 PF00989 PAS fold JGY87_RS04655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS04665 PF04647 Accessory gene regulator B JGY87_RS04670 PF00795 Carbon-nitrogen hydrolase JGY87_RS04685 PF02517 CPBP intramembrane metalloprotease JGY87_RS04690 PF00166 Chaperonin 10 Kd subunit JGY87_RS04695 PF00118 TCP-1/cpn60 chaperonin family JGY87_RS04720 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS04725 PF00005 ABC transporter JGY87_RS04735 PF00005 ABC transporter JGY87_RS04780 PF10282 Lactonase, 7-bladed beta-propeller JGY87_RS04785 PF00171 Aldehyde dehydrogenase family JGY87_RS04790 PF02833 DHHA2 domain JGY87_RS04790 PF01368 DHH family JGY87_RS04795 PF00857 Isochorismatase family JGY87_RS04805 PF00939 Sodium:sulfate symporter transmembrane region JGY87_RS04810 PF00800 Prephenate dehydratase JGY87_RS04815 PF02898 Nitric oxide synthase, oxygenase domain JGY87_RS04820 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JGY87_RS04820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JGY87_RS04820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JGY87_RS04825 PF02540 NAD synthase JGY87_RS04830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JGY87_RS04840 PF10397 Adenylosuccinate lyase C-terminus JGY87_RS04840 PF00206 Lyase JGY87_RS04845 PF01371 Trp repressor protein JGY87_RS04850 PF02557 D-alanyl-D-alanine carboxypeptidase JGY87_RS04855 PF01884 PcrB family JGY87_RS04860 PF13361 UvrD-like helicase C-terminal domain JGY87_RS04860 PF00580 UvrD/REP helicase N-terminal domain JGY87_RS04865 PF00533 BRCA1 C Terminus (BRCT) domain JGY87_RS04865 PF03120 NAD-dependent DNA ligase OB-fold domain JGY87_RS04865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JGY87_RS04865 PF12826 Helix-hairpin-helix motif JGY87_RS04865 PF01653 NAD-dependent DNA ligase adenylation domain JGY87_RS04870 PF07537 CamS sex pheromone cAM373 precursor JGY87_RS04875 PF00474 Sodium:solute symporter family JGY87_RS04880 PF02686 Glu-tRNAGln amidotransferase C subunit JGY87_RS04885 PF01425 Amidase JGY87_RS04890 PF02934 GatB/GatE catalytic domain JGY87_RS04890 PF02637 GatB domain JGY87_RS04895 PF00781 Diacylglycerol kinase catalytic domain JGY87_RS04900 PF05958 tRNA (Uracil-5-)-methyltransferase JGY87_RS04910 PF00817 impB/mucB/samB family JGY87_RS04910 PF11799 impB/mucB/samB family C-terminal domain JGY87_RS04920 PF00210 Ferritin-like domain JGY87_RS04925 PF08245 Mur ligase middle domain JGY87_RS04925 PF08353 Domain of unknown function (DUF1727) JGY87_RS04930 PF07685 CobB/CobQ-like glutamine amidotransferase domain JGY87_RS04935 PF06081 Aromatic acid exporter family member 1 JGY87_RS04940 PF00557 Metallopeptidase family M24 JGY87_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS04955 PF07730 Histidine kinase JGY87_RS04960 PF00196 Bacterial regulatory proteins, luxR family JGY87_RS04960 PF00072 Response regulator receiver domain JGY87_RS04965 PF03631 Virulence factor BrkB JGY87_RS04975 PF01451 Low molecular weight phosphotyrosine protein phosphatase JGY87_RS04980 PF06569 Protein of unknown function (DUF1128) JGY87_RS04985 PF02073 Thermophilic metalloprotease (M29) JGY87_RS04990 PF03061 Thioesterase superfamily JGY87_RS04995 PF08756 YfkB-like domain JGY87_RS04995 PF04055 Radical SAM superfamily JGY87_RS05005 PF01965 DJ-1/PfpI family JGY87_RS05010 PF00912 Transglycosylase JGY87_RS05015 PF02631 RecX family JGY87_RS05025 PF00005 ABC transporter JGY87_RS05035 PF04307 LexA-binding, inner membrane-associated putative hydrolase JGY87_RS05040 PF14815 NUDIX domain JGY87_RS05040 PF00633 Helix-hairpin-helix motif JGY87_RS05040 PF00730 HhH-GPD superfamily base excision DNA repair protein JGY87_RS05045 PF04167 Protein of unknown function (DUF402) JGY87_RS05050 PF00664 ABC transporter transmembrane region JGY87_RS05050 PF00005 ABC transporter JGY87_RS05055 PF06081 Aromatic acid exporter family member 1 JGY87_RS05060 PF00202 Aminotransferase class-III JGY87_RS05065 PF00578 AhpC/TSA family JGY87_RS05070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JGY87_RS05070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS05075 PF01475 Ferric uptake regulator family JGY87_RS05225 PF02261 Aspartate decarboxylase JGY87_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS05245 PF00005 ABC transporter JGY87_RS05250 PF08331 Domain of unknown function (DUF1730) JGY87_RS05255 PF00588 SpoU rRNA Methylase family JGY87_RS05260 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JGY87_RS05275 PF10415 Fumarase C C-terminus JGY87_RS05275 PF00206 Lyase JGY87_RS05280 PF01479 S4 domain JGY87_RS05280 PF00849 RNA pseudouridylate synthase JGY87_RS05285 PF13185 GAF domain JGY87_RS05285 PF07730 Histidine kinase JGY87_RS05290 PF00196 Bacterial regulatory proteins, luxR family JGY87_RS05290 PF00072 Response regulator receiver domain JGY87_RS05295 PF00375 Sodium:dicarboxylate symporter family JGY87_RS05300 PF01098 Cell cycle protein JGY87_RS05305 PF03816 Cell envelope-related transcriptional attenuator domain JGY87_RS05310 PF01925 Sulfite exporter TauE/SafE JGY87_RS05320 PF01061 ABC-2 type transporter JGY87_RS05325 PF04055 Radical SAM superfamily JGY87_RS05330 PF01228 Glycine radical JGY87_RS05330 PF02901 Pyruvate formate lyase-like JGY87_RS05335 PF01842 ACT domain JGY87_RS05335 PF00551 Formyl transferase JGY87_RS05345 PF04286 Protein of unknown function (DUF445) JGY87_RS05350 PF06133 Control of competence regulator ComK, YlbF/YmcA JGY87_RS05355 PF00149 Calcineurin-like phosphoesterase JGY87_RS05360 PF13514 AAA domain JGY87_RS05365 PF01966 HD domain JGY87_RS05370 PF00639 PPIC-type PPIASE domain JGY87_RS05385 PF01230 HIT domain JGY87_RS05390 PF00005 ABC transporter JGY87_RS05395 PF05975 Bacterial ABC transporter protein EcsB JGY87_RS05405 PF01208 Uroporphyrinogen decarboxylase (URO-D) JGY87_RS05410 PF00762 Ferrochelatase JGY87_RS05415 PF01593 Flavin containing amine oxidoreductase JGY87_RS05420 PF06821 Serine hydrolase JGY87_RS05510 PF05105 Bacteriophage holin family JGY87_RS05530 PF01510 N-acetylmuramoyl-L-alanine amidase JGY87_RS05530 PF05257 CHAP domain JGY87_RS05530 PF08460 Bacterial SH3 domain JGY87_RS05555 PF00106 short chain dehydrogenase JGY87_RS05575 PF00106 short chain dehydrogenase JGY87_RS05595 PF00535 Glycosyl transferase family 2 JGY87_RS05605 PF00501 AMP-binding enzyme JGY87_RS05605 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS05615 PF01809 Putative membrane protein insertion efficiency factor JGY87_RS05625 PF00326 Prolyl oligopeptidase family JGY87_RS05630 PF01293 Phosphoenolpyruvate carboxykinase JGY87_RS05635 PF02773 S-adenosylmethionine synthetase, C-terminal domain JGY87_RS05635 PF00438 S-adenosylmethionine synthetase, N-terminal domain JGY87_RS05635 PF02772 S-adenosylmethionine synthetase, central domain JGY87_RS05645 PF00248 Aldo/keto reductase family JGY87_RS05650 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JGY87_RS05655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JGY87_RS05665 PF00923 Transaldolase/Fructose-6-phosphate aldolase JGY87_RS05685 PF00196 Bacterial regulatory proteins, luxR family JGY87_RS05685 PF04542 Sigma-70 region 2 JGY87_RS05695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JGY87_RS05695 PF13457 GW (Gly-Tryp) dipeptide domain JGY87_RS05700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JGY87_RS05710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JGY87_RS05710 PF01872 RibD C-terminal domain JGY87_RS05715 PF00677 Lumazine binding domain JGY87_RS05720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JGY87_RS05720 PF00925 GTP cyclohydrolase II JGY87_RS05725 PF00885 6,7-dimethyl-8-ribityllumazine synthase JGY87_RS05730 PF01619 Proline dehydrogenase JGY87_RS05735 PF12146 Serine aminopeptidase, S33 JGY87_RS05740 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JGY87_RS05740 PF00056 lactate/malate dehydrogenase, NAD binding domain JGY87_RS05745 PF01047 MarR family JGY87_RS05750 PF06962 Putative rRNA methylase JGY87_RS05755 PF16199 Radical_SAM C-terminal domain JGY87_RS05755 PF04055 Radical SAM superfamily JGY87_RS05760 PF07690 Major Facilitator Superfamily JGY87_RS05765 PF08264 Anticodon-binding domain of tRNA JGY87_RS05765 PF00133 tRNA synthetases class I (I, L, M and V) JGY87_RS05765 PF13603 Leucyl-tRNA synthetase, Domain 2 JGY87_RS05765 PF09334 tRNA synthetases class I (M) JGY87_RS05780 PF01943 Polysaccharide biosynthesis protein JGY87_RS05780 PF14667 Polysaccharide biosynthesis C-terminal domain JGY87_RS05785 PF00849 RNA pseudouridylate synthase JGY87_RS05785 PF01479 S4 domain JGY87_RS05795 PF01546 Peptidase family M20/M25/M40 JGY87_RS05800 PF01063 Amino-transferase class IV JGY87_RS05805 PF01636 Phosphotransferase enzyme family JGY87_RS05810 PF02390 Putative methyltransferase JGY87_RS05815 PF00753 Metallo-beta-lactamase superfamily JGY87_RS05825 PF05343 M42 glutamyl aminopeptidase JGY87_RS05830 PF00085 Thioredoxin JGY87_RS05835 PF07285 Protein of unknown function (DUF1444) JGY87_RS05840 PF14794 Domain of unknown function (DUF4479) JGY87_RS05840 PF01588 Putative tRNA binding domain JGY87_RS05845 PF17854 FtsK alpha domain JGY87_RS05845 PF01580 FtsK/SpoIIIE family JGY87_RS05845 PF09397 Ftsk gamma domain JGY87_RS05850 PF08245 Mur ligase middle domain JGY87_RS05850 PF01225 Mur ligase family, catalytic domain JGY87_RS05850 PF02875 Mur ligase family, glutamate ligase domain JGY87_RS05855 PF06103 Bacterial protein of unknown function (DUF948) JGY87_RS05865 PF01817 Chorismate mutase type II JGY87_RS05865 PF00793 DAHP synthetase I family JGY87_RS05870 PF00356 Bacterial regulatory proteins, lacI family JGY87_RS05875 PF00850 Histone deacetylase domain JGY87_RS05880 PF00583 Acetyltransferase (GNAT) family JGY87_RS05885 PF00501 AMP-binding enzyme JGY87_RS05885 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS05890 PF01268 Formate--tetrahydrofolate ligase JGY87_RS05895 PF00912 Transglycosylase JGY87_RS05895 PF00905 Penicillin binding protein transpeptidase domain JGY87_RS05900 PF01479 S4 domain JGY87_RS05900 PF00579 tRNA synthetases class I (W and Y) JGY87_RS05905 PF13180 PDZ domain JGY87_RS05910 PF01553 Acyltransferase JGY87_RS05925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JGY87_RS05925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS05925 PF01842 ACT domain JGY87_RS05930 PF00266 Aminotransferase class-V JGY87_RS05935 PF02566 OsmC-like protein JGY87_RS05940 PF03009 Glycerophosphoryl diester phosphodiesterase family JGY87_RS05945 PF13302 Acetyltransferase (GNAT) domain JGY87_RS05950 PF00163 Ribosomal protein S4/S9 N-terminal domain JGY87_RS05950 PF01479 S4 domain JGY87_RS05955 PF13185 GAF domain JGY87_RS05960 PF06160 Septation ring formation regulator, EzrA JGY87_RS05965 PF00266 Aminotransferase class-V JGY87_RS05970 PF02568 Thiamine biosynthesis protein (ThiI) JGY87_RS05970 PF02926 THUMP domain JGY87_RS05975 PF01925 Sulfite exporter TauE/SafE JGY87_RS05980 PF01343 Peptidase family S49 JGY87_RS05985 PF06271 RDD family JGY87_RS05990 PF08534 Redoxin JGY87_RS05995 PF02384 N-6 DNA Methylase JGY87_RS06000 PF00871 Acetokinase family JGY87_RS06010 PF00582 Universal stress protein family JGY87_RS06015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JGY87_RS06015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JGY87_RS06020 PF03932 CutC family JGY87_RS06025 PF01321 Creatinase/Prolidase N-terminal domain JGY87_RS06025 PF00557 Metallopeptidase family M24 JGY87_RS06040 PF00571 CBS domain JGY87_RS06040 PF03061 Thioesterase superfamily JGY87_RS06040 PF07085 DRTGG domain JGY87_RS06040 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS06045 PF01368 DHH family JGY87_RS06045 PF02272 DHHA1 domain JGY87_RS06050 PF01336 OB-fold nucleic acid binding domain JGY87_RS06050 PF07733 Bacterial DNA polymerase III alpha NTPase domain JGY87_RS06050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JGY87_RS06050 PF02811 PHP domain JGY87_RS06050 PF14579 Helix-hairpin-helix motif JGY87_RS06055 PF00390 Malic enzyme, N-terminal domain JGY87_RS06055 PF03949 Malic enzyme, NAD binding domain JGY87_RS06060 PF01039 Carboxyl transferase domain JGY87_RS06060 PF17848 Acetyl-coA carboxylase zinc finger domain JGY87_RS06065 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JGY87_RS06070 PF00365 Phosphofructokinase JGY87_RS06075 PF00391 PEP-utilising enzyme, mobile domain JGY87_RS06075 PF00224 Pyruvate kinase, barrel domain JGY87_RS06075 PF02887 Pyruvate kinase, alpha/beta domain JGY87_RS06080 PF00324 Amino acid permease JGY87_RS06085 PF00285 Citrate synthase, C-terminal domain JGY87_RS06090 PF00180 Isocitrate/isopropylmalate dehydrogenase JGY87_RS06095 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS06095 PF00072 Response regulator receiver domain JGY87_RS06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS06100 PF00512 His Kinase A (phospho-acceptor) domain JGY87_RS06100 PF00989 PAS fold JGY87_RS06100 PF16736 Single Cache-like JGY87_RS06105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JGY87_RS06105 PF01367 5'-3' exonuclease, C-terminal SAM fold JGY87_RS06105 PF00476 DNA polymerase family A JGY87_RS06110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JGY87_RS06110 PF06827 Zinc finger found in FPG and IleRS JGY87_RS06110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JGY87_RS06115 PF01121 Dephospho-CoA kinase JGY87_RS06120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JGY87_RS06120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JGY87_RS06125 PF03477 ATP cone domain JGY87_RS06135 PF07319 Primosomal protein DnaI N-terminus JGY87_RS06135 PF01695 IstB-like ATP binding protein JGY87_RS06140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JGY87_RS06140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JGY87_RS06140 PF03129 Anticodon binding domain JGY87_RS06140 PF02824 TGS domain JGY87_RS06145 PF00324 Amino acid permease JGY87_RS06150 PF00707 Translation initiation factor IF-3, C-terminal domain JGY87_RS06150 PF05198 Translation initiation factor IF-3, N-terminal domain JGY87_RS06155 PF01632 Ribosomal protein L35 JGY87_RS06160 PF00453 Ribosomal protein L20 JGY87_RS06175 PF05698 Bacterial trigger factor protein (TF) C-terminus JGY87_RS06175 PF05697 Bacterial trigger factor protein (TF) JGY87_RS06175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JGY87_RS06180 PF07724 AAA domain (Cdc48 subfamily) JGY87_RS06180 PF10431 C-terminal, D2-small domain, of ClpB protein JGY87_RS06180 PF06689 ClpX C4-type zinc finger JGY87_RS06185 PF01926 50S ribosome-binding GTPase JGY87_RS06190 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JGY87_RS06190 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JGY87_RS06190 PF01488 Shikimate / quinate 5-dehydrogenase JGY87_RS06195 PF01578 Cytochrome C assembly protein JGY87_RS06200 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JGY87_RS06200 PF03900 Porphobilinogen deaminase, C-terminal domain JGY87_RS06210 PF00490 Delta-aminolevulinic acid dehydratase JGY87_RS06215 PF00202 Aminotransferase class-III JGY87_RS06225 PF03352 Methyladenine glycosylase JGY87_RS06230 PF00133 tRNA synthetases class I (I, L, M and V) JGY87_RS06230 PF08264 Anticodon-binding domain of tRNA JGY87_RS06230 PF10458 Valyl tRNA synthetase tRNA binding arm JGY87_RS06235 PF02875 Mur ligase family, glutamate ligase domain JGY87_RS06235 PF08245 Mur ligase middle domain JGY87_RS06250 PF04002 RadC-like JAB domain JGY87_RS06275 PF04085 rod shape-determining protein MreC JGY87_RS06285 PF00829 Ribosomal prokaryotic L21 protein JGY87_RS06290 PF04327 Cysteine protease Prp JGY87_RS06295 PF01016 Ribosomal L27 protein JGY87_RS06300 PF01926 50S ribosome-binding GTPase JGY87_RS06300 PF01018 GTP1/OBG JGY87_RS06300 PF09269 Domain of unknown function (DUF1967) JGY87_RS06310 PF01330 RuvA N terminal domain JGY87_RS06310 PF07499 RuvA, C-terminal domain JGY87_RS06315 PF05491 RuvB C-terminal winged helix domain JGY87_RS06315 PF17864 RuvB AAA lid domain JGY87_RS06315 PF05496 Holliday junction DNA helicase RuvB P-loop domain JGY87_RS06320 PF02547 Queuosine biosynthesis protein JGY87_RS06325 PF01702 Queuine tRNA-ribosyltransferase JGY87_RS06330 PF02699 Preprotein translocase subunit JGY87_RS06335 PF07549 SecD/SecF GG Motif JGY87_RS06335 PF02355 Protein export membrane protein JGY87_RS06340 PF01368 DHH family JGY87_RS06340 PF02272 DHHA1 domain JGY87_RS06340 PF17768 RecJ OB domain JGY87_RS06340 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JGY87_RS06345 PF00156 Phosphoribosyl transferase domain JGY87_RS06350 PF13291 ACT domain JGY87_RS06350 PF04607 Region found in RelA / SpoT proteins JGY87_RS06350 PF02824 TGS domain JGY87_RS06355 PF02580 D-Tyr-tRNA(Tyr) deacylase JGY87_RS06360 PF01520 N-acetylmuramoyl-L-alanine amidase JGY87_RS06360 PF08239 Bacterial SH3 domain JGY87_RS06365 PF03129 Anticodon binding domain JGY87_RS06365 PF13393 Histidyl-tRNA synthetase JGY87_RS06370 PF02938 GAD domain JGY87_RS06370 PF01336 OB-fold nucleic acid binding domain JGY87_RS06370 PF00152 tRNA synthetases class II (D, K and N) JGY87_RS06380 PF00899 ThiF family JGY87_RS06385 PF12002 MgsA AAA+ ATPase C terminal JGY87_RS06385 PF16193 AAA C-terminal domain JGY87_RS06385 PF05496 Holliday junction DNA helicase RuvB P-loop domain JGY87_RS06390 PF02082 Transcriptional regulator JGY87_RS06405 PF00296 Luciferase-like monooxygenase JGY87_RS06410 PF00005 ABC transporter JGY87_RS06410 PF16326 ABC transporter C-terminal domain JGY87_RS06410 PF12848 ABC transporter JGY87_RS06415 PF00266 Aminotransferase class-V JGY87_RS06430 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JGY87_RS06430 PF14490 Helix-hairpin-helix containing domain JGY87_RS06430 PF13538 UvrD-like helicase C-terminal domain JGY87_RS06435 PF02272 DHHA1 domain JGY87_RS06435 PF01411 tRNA synthetases class II (A) JGY87_RS06435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JGY87_RS06440 PF06135 IreB regulatory phosphoprotein JGY87_RS06445 PF03652 Holliday junction resolvase JGY87_RS06450 PF06949 Protein of unknown function (DUF1292) JGY87_RS06455 PF01596 O-methyltransferase JGY87_RS06460 PF01136 Peptidase family U32 JGY87_RS06465 PF01136 Peptidase family U32 JGY87_RS06465 PF16325 Peptidase family U32 C-terminal domain JGY87_RS06470 PF00485 Phosphoribulokinase / Uridine kinase family JGY87_RS06475 PF01272 Transcription elongation factor, GreA/GreB, C-term JGY87_RS06475 PF03449 Transcription elongation factor, N-terminal JGY87_RS06480 PF02682 Carboxyltransferase domain, subdomain C and D JGY87_RS06485 PF02626 Carboxyltransferase domain, subdomain A and B JGY87_RS06490 PF00364 Biotin-requiring enzyme JGY87_RS06495 PF02785 Biotin carboxylase C-terminal domain JGY87_RS06495 PF00289 Biotin carboxylase, N-terminal domain JGY87_RS06495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JGY87_RS06500 PF03746 LamB/YcsF family JGY87_RS06505 PF01566 Natural resistance-associated macrophage protein JGY87_RS06510 PF01925 Sulfite exporter TauE/SafE JGY87_RS06515 PF01048 Phosphorylase superfamily JGY87_RS06525 PF01926 50S ribosome-binding GTPase JGY87_RS06530 PF01488 Shikimate / quinate 5-dehydrogenase JGY87_RS06530 PF08501 Shikimate dehydrogenase substrate binding domain JGY87_RS06530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JGY87_RS06535 PF01985 CRS1 / YhbY (CRM) domain JGY87_RS06540 PF01467 Cytidylyltransferase-like JGY87_RS06545 PF01966 HD domain JGY87_RS06555 PF13649 Methyltransferase domain JGY87_RS06560 PF10531 SLBB domain JGY87_RS06565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JGY87_RS06575 PF00753 Metallo-beta-lactamase superfamily JGY87_RS06575 PF13567 Domain of unknown function (DUF4131) JGY87_RS06575 PF03772 Competence protein JGY87_RS06580 PF06144 DNA polymerase III, delta subunit JGY87_RS06585 PF01649 Ribosomal protein S20 JGY87_RS06590 PF00679 Elongation factor G C-terminus JGY87_RS06590 PF14492 Elongation Factor G, domain II JGY87_RS06590 PF03144 Elongation factor Tu domain 2 JGY87_RS06590 PF06421 GTP-binding protein LepA C-terminus JGY87_RS06590 PF00009 Elongation factor Tu GTP binding domain JGY87_RS06595 PF06969 HemN C-terminal domain JGY87_RS06595 PF04055 Radical SAM superfamily JGY87_RS06600 PF01628 HrcA protein C terminal domain JGY87_RS06600 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JGY87_RS06605 PF01025 GrpE JGY87_RS06610 PF00012 Hsp70 protein JGY87_RS06615 PF00226 DnaJ domain JGY87_RS06615 PF01556 DnaJ C terminal domain JGY87_RS06615 PF00684 DnaJ central domain JGY87_RS06625 PF04452 RNA methyltransferase JGY87_RS06630 PF01165 Ribosomal protein S21 JGY87_RS06635 PF01957 NfeD-like C-terminal, partner-binding JGY87_RS06635 PF01972 Serine dehydrogenase proteinase JGY87_RS06640 PF12127 SigmaW regulon antibacterial JGY87_RS06650 PF02562 PhoH-like protein JGY87_RS06655 PF02130 Uncharacterized protein family UPF0054 JGY87_RS06660 PF01219 Prokaryotic diacylglycerol kinase JGY87_RS06665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JGY87_RS06670 PF07650 KH domain JGY87_RS06670 PF01926 50S ribosome-binding GTPase JGY87_RS06675 PF11967 Recombination protein O N terminal JGY87_RS06675 PF02565 Recombination protein O C terminal JGY87_RS06680 PF03129 Anticodon binding domain JGY87_RS06680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JGY87_RS06685 PF00571 CBS domain JGY87_RS06685 PF08279 HTH domain JGY87_RS06690 PF03618 Kinase/pyrophosphorylase JGY87_RS06695 PF01807 CHC2 zinc finger JGY87_RS06695 PF00772 DnaB-like helicase N terminal domain JGY87_RS06695 PF08275 DNA primase catalytic core, N-terminal domain JGY87_RS06700 PF03979 Sigma-70 factor, region 1.1 JGY87_RS06700 PF00140 Sigma-70 factor, region 1.2 JGY87_RS06700 PF04542 Sigma-70 region 2 JGY87_RS06700 PF04539 Sigma-70 region 3 JGY87_RS06700 PF04545 Sigma-70, region 4 JGY87_RS06705 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JGY87_RS06710 PF01784 NIF3 (NGG1p interacting factor 3) JGY87_RS06715 PF00271 Helicase conserved C-terminal domain JGY87_RS06715 PF00270 DEAD/DEAH box helicase JGY87_RS06720 PF01261 Xylose isomerase-like TIM barrel JGY87_RS06725 PF00005 ABC transporter JGY87_RS06730 PF00950 ABC 3 transport family JGY87_RS06735 PF01475 Ferric uptake regulator family JGY87_RS06740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JGY87_RS06740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JGY87_RS06745 PF00905 Penicillin binding protein transpeptidase domain JGY87_RS06745 PF03717 Penicillin-binding Protein dimerisation domain JGY87_RS06750 PF00471 Ribosomal protein L33 JGY87_RS06755 PF01812 5-formyltetrahydrofolate cyclo-ligase family JGY87_RS06760 PF01694 Rhomboid family JGY87_RS06765 PF06014 Bacterial protein of unknown function (DUF910) JGY87_RS06770 PF00480 ROK family JGY87_RS06775 PF01910 Thiamine-binding protein JGY87_RS06780 PF00753 Metallo-beta-lactamase superfamily JGY87_RS06785 PF00437 Type II/IV secretion system protein JGY87_RS06815 PF01202 Shikimate kinase JGY87_RS06820 PF01571 Aminomethyltransferase folate-binding domain JGY87_RS06820 PF08669 Glycine cleavage T-protein C-terminal barrel domain JGY87_RS06825 PF02347 Glycine cleavage system P-protein JGY87_RS06830 PF00266 Aminotransferase class-V JGY87_RS06835 PF00581 Rhodanese-like domain JGY87_RS06840 PF03099 Biotin/lipoate A/B protein ligase family JGY87_RS06855 PF01321 Creatinase/Prolidase N-terminal domain JGY87_RS06855 PF00557 Metallopeptidase family M24 JGY87_RS06860 PF01132 Elongation factor P (EF-P) OB domain JGY87_RS06860 PF08207 Elongation factor P (EF-P) KOW-like domain JGY87_RS06860 PF09285 Elongation factor P, C-terminal JGY87_RS06865 PF00364 Biotin-requiring enzyme JGY87_RS06870 PF00289 Biotin carboxylase, N-terminal domain JGY87_RS06870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JGY87_RS06870 PF02785 Biotin carboxylase C-terminal domain JGY87_RS06875 PF03780 Asp23 family, cell envelope-related function JGY87_RS06880 PF01029 NusB family JGY87_RS06885 PF02601 Exonuclease VII, large subunit JGY87_RS06885 PF13742 OB-fold nucleic acid binding domain JGY87_RS06890 PF02609 Exonuclease VII small subunit JGY87_RS06895 PF00348 Polyprenyl synthetase JGY87_RS06900 PF01316 Arginine repressor, DNA binding domain JGY87_RS06900 PF02863 Arginine repressor, C-terminal domain JGY87_RS06905 PF13476 AAA domain JGY87_RS06910 PF01515 Phosphate acetyl/butaryl transferase JGY87_RS06915 PF00871 Acetokinase family JGY87_RS06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS06920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JGY87_RS06925 PF00676 Dehydrogenase E1 component JGY87_RS06930 PF02779 Transketolase, pyrimidine binding domain JGY87_RS06930 PF02780 Transketolase, C-terminal domain JGY87_RS06935 PF02817 e3 binding domain JGY87_RS06935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JGY87_RS06935 PF00364 Biotin-requiring enzyme JGY87_RS06940 PF06491 Disulphide isomerase JGY87_RS06945 PF06081 Aromatic acid exporter family member 1 JGY87_RS06945 PF11728 Putative aromatic acid exporter C-terminal domain JGY87_RS06955 PF07687 Peptidase dimerisation domain JGY87_RS06955 PF01546 Peptidase family M20/M25/M40 JGY87_RS06960 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JGY87_RS06960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JGY87_RS06965 PF00356 Bacterial regulatory proteins, lacI family JGY87_RS06970 PF00128 Alpha amylase, catalytic domain JGY87_RS06970 PF16657 Maltogenic Amylase, C-terminal domain JGY87_RS06980 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JGY87_RS06980 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JGY87_RS06985 PF12706 Beta-lactamase superfamily domain JGY87_RS06990 PF03807 NADP oxidoreductase coenzyme F420-dependent JGY87_RS06990 PF14748 Pyrroline-5-carboxylate reductase dimerisation JGY87_RS07000 PF00248 Aldo/keto reductase family JGY87_RS07005 PF00293 NUDIX domain JGY87_RS07010 PF01475 Ferric uptake regulator family JGY87_RS07015 PF00589 Phage integrase family JGY87_RS07015 PF02899 Phage integrase, N-terminal SAM-like domain JGY87_RS07025 PF02616 Segregation and condensation protein ScpA JGY87_RS07030 PF04079 Segregation and condensation complex subunit ScpB JGY87_RS07035 PF01479 S4 domain JGY87_RS07035 PF00849 RNA pseudouridylate synthase JGY87_RS07040 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS07040 PF00072 Response regulator receiver domain JGY87_RS07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS07045 PF00672 HAMP domain JGY87_RS07045 PF18698 Histidine kinase sensor domain JGY87_RS07045 PF00512 His Kinase A (phospho-acceptor) domain JGY87_RS07050 PF12822 ECF transporter, substrate-specific component JGY87_RS07065 PF00270 DEAD/DEAH box helicase JGY87_RS07065 PF00271 Helicase conserved C-terminal domain JGY87_RS07070 PF01476 LysM domain JGY87_RS07080 PF00710 Asparaginase, N-terminal JGY87_RS07080 PF17763 Glutaminase/Asparaginase C-terminal domain JGY87_RS07085 PF02224 Cytidylate kinase JGY87_RS07090 PF00575 S1 RNA binding domain JGY87_RS07095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JGY87_RS07095 PF01926 50S ribosome-binding GTPase JGY87_RS07100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JGY87_RS07100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JGY87_RS07105 PF00216 Bacterial DNA-binding protein JGY87_RS07115 PF01209 ubiE/COQ5 methyltransferase family JGY87_RS07120 PF00348 Polyprenyl synthetase JGY87_RS07125 PF00334 Nucleoside diphosphate kinase JGY87_RS07130 PF01264 Chorismate synthase JGY87_RS07135 PF01761 3-dehydroquinate synthase JGY87_RS07140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JGY87_RS07150 PF08858 IDEAL domain JGY87_RS07150 PF08864 UPF0302 domain JGY87_RS07155 PF07187 Protein of unknown function (DUF1405) JGY87_RS07160 PF04298 Putative neutral zinc metallopeptidase JGY87_RS07165 PF03819 MazG nucleotide pyrophosphohydrolase domain JGY87_RS07170 PF13439 Glycosyltransferase Family 4 JGY87_RS07170 PF00534 Glycosyl transferases group 1 JGY87_RS07175 PF13735 tRNA nucleotidyltransferase domain 2 putative JGY87_RS07175 PF12627 Probable RNA and SrmB- binding site of polymerase A JGY87_RS07175 PF01743 Poly A polymerase head domain JGY87_RS07180 PF03099 Biotin/lipoate A/B protein ligase family JGY87_RS07180 PF08279 HTH domain JGY87_RS07180 PF02237 Biotin protein ligase C terminal domain JGY87_RS07185 PF13307 Helicase C-terminal domain JGY87_RS07185 PF04851 Type III restriction enzyme, res subunit JGY87_RS07185 PF00929 Exonuclease JGY87_RS07190 PF00152 tRNA synthetases class II (D, K and N) JGY87_RS07190 PF01336 OB-fold nucleic acid binding domain JGY87_RS07195 PF07261 Replication initiation and membrane attachment JGY87_RS07200 PF00633 Helix-hairpin-helix motif JGY87_RS07200 PF00730 HhH-GPD superfamily base excision DNA repair protein JGY87_RS07200 PF10576 Iron-sulfur binding domain of endonuclease III JGY87_RS07210 PF00912 Transglycosylase JGY87_RS07210 PF00905 Penicillin binding protein transpeptidase domain JGY87_RS07215 PF03838 Recombination protein U JGY87_RS07225 PF06908 YspA SLOG family JGY87_RS07230 PF05103 DivIVA protein JGY87_RS07240 PF02926 THUMP domain JGY87_RS07240 PF01170 Putative RNA methylase family UPF0020 JGY87_RS07245 PF00892 EamA-like transporter family JGY87_RS07255 PF00350 Dynamin family JGY87_RS07260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JGY87_RS07260 PF01367 5'-3' exonuclease, C-terminal SAM fold JGY87_RS07270 PF06821 Serine hydrolase JGY87_RS07275 PF02592 Putative vitamin uptake transporter JGY87_RS07285 PF08712 Scaffold protein Nfu/NifU N terminal JGY87_RS07285 PF13769 Virulence factor JGY87_RS07290 PF08712 Scaffold protein Nfu/NifU N terminal JGY87_RS07290 PF13769 Virulence factor JGY87_RS07295 PF06491 Disulphide isomerase JGY87_RS07300 PF00303 Thymidylate synthase JGY87_RS07305 PF00186 Dihydrofolate reductase JGY87_RS07310 PF02645 Uncharacterised protein, DegV family COG1307 JGY87_RS07315 PF01625 Peptide methionine sulfoxide reductase JGY87_RS07320 PF01641 SelR domain JGY87_RS07325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JGY87_RS07330 PF06855 YozE SAM-like fold JGY87_RS07335 PF17820 PDZ domain JGY87_RS07335 PF03572 Peptidase family S41 JGY87_RS07335 PF01471 Putative peptidoglycan binding domain JGY87_RS07345 PF03033 Glycosyltransferase family 28 N-terminal domain JGY87_RS07345 PF04101 Glycosyltransferase family 28 C-terminal domain JGY87_RS07350 PF01569 PAP2 superfamily JGY87_RS07355 PF00072 Response regulator receiver domain JGY87_RS07355 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS07360 PF18719 ArlS sensor domain JGY87_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS07360 PF00512 His Kinase A (phospho-acceptor) domain JGY87_RS07365 PF00676 Dehydrogenase E1 component JGY87_RS07365 PF02779 Transketolase, pyrimidine binding domain JGY87_RS07365 PF16870 2-oxoglutarate dehydrogenase C-terminal JGY87_RS07370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JGY87_RS07370 PF00364 Biotin-requiring enzyme JGY87_RS07370 PF02817 e3 binding domain JGY87_RS07380 PF02040 Arsenical pump membrane protein JGY87_RS07390 PF02311 AraC-like ligand binding domain JGY87_RS07390 PF12833 Helix-turn-helix domain JGY87_RS07415 PF01872 RibD C-terminal domain JGY87_RS07420 PF00005 ABC transporter JGY87_RS07445 PF07728 AAA domain (dynein-related subfamily) JGY87_RS07445 PF08406 CbbQ/NirQ/NorQ C-terminal JGY87_RS07450 PF00092 von Willebrand factor type A domain JGY87_RS07455 PF05525 Branched-chain amino acid transport protein JGY87_RS07460 PF02028 BCCT, betaine/carnitine/choline family transporter JGY87_RS07465 PF05816 Toxic anion resistance protein (TelA) JGY87_RS07475 PF00708 Acylphosphatase JGY87_RS07485 PF00313 'Cold-shock' DNA-binding domain JGY87_RS07490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JGY87_RS07490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JGY87_RS07495 PF00842 Alanine racemase, C-terminal domain JGY87_RS07495 PF01168 Alanine racemase, N-terminal domain JGY87_RS07500 PF01546 Peptidase family M20/M25/M40 JGY87_RS07505 PF14602 Hexapeptide repeat of succinyl-transferase JGY87_RS07505 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JGY87_RS07505 PF00132 Bacterial transferase hexapeptide (six repeats) JGY87_RS07510 PF05173 Dihydrodipicolinate reductase, C-terminus JGY87_RS07510 PF01113 Dihydrodipicolinate reductase, N-terminus JGY87_RS07515 PF00701 Dihydrodipicolinate synthetase family JGY87_RS07520 PF01118 Semialdehyde dehydrogenase, NAD binding domain JGY87_RS07520 PF02774 Semialdehyde dehydrogenase, dimerisation domain JGY87_RS07525 PF00696 Amino acid kinase family JGY87_RS07525 PF01842 ACT domain JGY87_RS07525 PF13840 ACT domain JGY87_RS07530 PF00248 Aldo/keto reductase family JGY87_RS07535 PF00005 ABC transporter JGY87_RS07535 PF12848 ABC transporter JGY87_RS07540 PF17783 CvfB-like winged helix domain JGY87_RS07540 PF13509 S1 domain JGY87_RS07545 PF12849 PBP superfamily domain JGY87_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS07555 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS07560 PF00005 ABC transporter JGY87_RS07565 PF01895 PhoU domain JGY87_RS07570 PF01432 Peptidase family M3 JGY87_RS07570 PF08439 Oligopeptidase F JGY87_RS07580 PF01497 Periplasmic binding protein JGY87_RS07590 PF02388 FemAB family JGY87_RS07595 PF02388 FemAB family JGY87_RS07605 PF00290 Tryptophan synthase alpha chain JGY87_RS07610 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS07615 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JGY87_RS07620 PF00218 Indole-3-glycerol phosphate synthase JGY87_RS07625 PF00591 Glycosyl transferase family, a/b domain JGY87_RS07630 PF00117 Glutamine amidotransferase class-I JGY87_RS07635 PF04715 Anthranilate synthase component I, N terminal region JGY87_RS07635 PF00425 chorismate binding enzyme JGY87_RS07650 PF00534 Glycosyl transferases group 1 JGY87_RS07650 PF09318 Glycosyl transferase 1 domain A JGY87_RS07655 PF03009 Glycerophosphoryl diester phosphodiesterase family JGY87_RS07665 PF05343 M42 glutamyl aminopeptidase JGY87_RS07670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS07675 PF01842 ACT domain JGY87_RS07675 PF02153 Prephenate dehydrogenase JGY87_RS07680 PF00817 impB/mucB/samB family JGY87_RS07680 PF11799 impB/mucB/samB family C-terminal domain JGY87_RS07680 PF11798 IMS family HHH motif JGY87_RS07685 PF01361 Tautomerase enzyme JGY87_RS07690 PF03816 Cell envelope-related transcriptional attenuator domain JGY87_RS07695 PF01625 Peptide methionine sulfoxide reductase JGY87_RS07700 PF13407 Periplasmic binding protein domain JGY87_RS07705 PF02653 Branched-chain amino acid transport system / permease component JGY87_RS07710 PF00005 ABC transporter JGY87_RS07715 PF05025 RbsD / FucU transport protein family JGY87_RS07720 PF00356 Bacterial regulatory proteins, lacI family JGY87_RS07730 PF03706 Lysylphosphatidylglycerol synthase TM region JGY87_RS07730 PF09924 Uncharacterised conserved protein (DUF2156) JGY87_RS07735 PF01594 AI-2E family transporter JGY87_RS07745 PF00874 PRD domain JGY87_RS07745 PF03123 CAT RNA binding domain JGY87_RS07750 PF01235 Sodium:alanine symporter family JGY87_RS07755 PF00521 DNA gyrase/topoisomerase IV, subunit A JGY87_RS07755 PF03989 DNA gyrase C-terminal domain, beta-propeller JGY87_RS07760 PF01751 Toprim domain JGY87_RS07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS07760 PF00986 DNA gyrase B subunit, carboxyl terminus JGY87_RS07760 PF00204 DNA gyrase B JGY87_RS07765 PF02660 Glycerol-3-phosphate acyltransferase JGY87_RS07775 PF03061 Thioesterase superfamily JGY87_RS07780 PF00694 Aconitase C-terminal domain JGY87_RS07780 PF00330 Aconitase family (aconitate hydratase) JGY87_RS07785 PF02028 BCCT, betaine/carnitine/choline family transporter JGY87_RS07790 PF01741 Large-conductance mechanosensitive channel, MscL JGY87_RS07795 PF13476 AAA domain JGY87_RS07800 PF12320 Type 5 capsule protein repressor C-terminal domain JGY87_RS07800 PF00149 Calcineurin-like phosphoesterase JGY87_RS07805 PF07301 Protein of unknown function (DUF1453) JGY87_RS07815 PF03672 Uncharacterised protein family (UPF0154) JGY87_RS07820 PF02779 Transketolase, pyrimidine binding domain JGY87_RS07820 PF02780 Transketolase, C-terminal domain JGY87_RS07820 PF00456 Transketolase, thiamine diphosphate binding domain JGY87_RS07825 PF05979 Bacterial protein of unknown function (DUF896) JGY87_RS07835 PF00717 Peptidase S24-like JGY87_RS07835 PF01726 LexA DNA binding domain JGY87_RS07845 PF00478 IMP dehydrogenase / GMP reductase domain JGY87_RS07850 PF00253 Ribosomal protein S14p/S29e JGY87_RS07855 PF00471 Ribosomal protein L33 JGY87_RS07860 PF06628 Catalase-related immune-responsive JGY87_RS07860 PF00199 Catalase JGY87_RS07865 PF00324 Amino acid permease JGY87_RS07880 PF08544 GHMP kinases C terminal JGY87_RS07880 PF00288 GHMP kinases N terminal domain JGY87_RS07885 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS07890 PF01842 ACT domain JGY87_RS07890 PF00742 Homoserine dehydrogenase JGY87_RS07890 PF03447 Homoserine dehydrogenase, NAD binding domain JGY87_RS07895 PF00696 Amino acid kinase family JGY87_RS07895 PF13840 ACT domain JGY87_RS07915 PF00565 Staphylococcal nuclease homologue JGY87_RS07930 PF04299 Putative FMN-binding domain JGY87_RS07935 PF02566 OsmC-like protein JGY87_RS07940 PF00120 Glutamine synthetase, catalytic domain JGY87_RS07940 PF03951 Glutamine synthetase, beta-Grasp domain JGY87_RS07945 PF13411 MerR HTH family regulatory protein JGY87_RS07950 PF06838 Methionine gamma-lyase JGY87_RS07955 PF16360 GTP-binding GTPase Middle Region JGY87_RS07955 PF13167 GTP-binding GTPase N-terminal JGY87_RS07955 PF01926 50S ribosome-binding GTPase JGY87_RS07960 PF00255 Glutathione peroxidase JGY87_RS07965 PF17209 Hfq protein JGY87_RS07980 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JGY87_RS07980 PF01266 FAD dependent oxidoreductase JGY87_RS07985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS07985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS07990 PF00230 Major intrinsic protein JGY87_RS08005 PF01119 DNA mismatch repair protein, C-terminal domain JGY87_RS08005 PF08676 MutL C terminal dimerisation domain JGY87_RS08010 PF01624 MutS domain I JGY87_RS08010 PF05188 MutS domain II JGY87_RS08010 PF05190 MutS family domain IV JGY87_RS08010 PF00488 MutS domain V JGY87_RS08010 PF05192 MutS domain III JGY87_RS08020 PF06133 Control of competence regulator ComK, YlbF/YmcA JGY87_RS08025 PF04055 Radical SAM superfamily JGY87_RS08025 PF01938 TRAM domain JGY87_RS08025 PF00919 Uncharacterized protein family UPF0004 JGY87_RS08030 PF01910 Thiamine-binding protein JGY87_RS08035 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS08040 PF02082 Transcriptional regulator JGY87_RS08045 PF05908 Poly-gamma-glutamate hydrolase JGY87_RS08055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JGY87_RS08060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JGY87_RS08060 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JGY87_RS08060 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JGY87_RS08065 PF13277 YmdB-like protein JGY87_RS08075 PF01966 HD domain JGY87_RS08075 PF00013 KH domain JGY87_RS08075 PF12072 Domain of unknown function (DUF3552) JGY87_RS08080 PF00154 recA bacterial DNA recombination protein JGY87_RS08085 PF02464 Competence-damaged protein JGY87_RS08085 PF18146 Damage-inducible protein CinA KH domain JGY87_RS08085 PF00994 Probable molybdopterin binding domain JGY87_RS08090 PF01066 CDP-alcohol phosphatidyltransferase JGY87_RS08100 PF11868 Protein of unknown function (DUF3388) JGY87_RS08110 PF00675 Insulinase (Peptidase family M16) JGY87_RS08110 PF05193 Peptidase M16 inactive domain JGY87_RS08115 PF05193 Peptidase M16 inactive domain JGY87_RS08120 PF07702 UTRA domain JGY87_RS08120 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS08125 PF01580 FtsK/SpoIIIE family JGY87_RS08125 PF09397 Ftsk gamma domain JGY87_RS08125 PF17854 FtsK alpha domain JGY87_RS08130 PF00753 Metallo-beta-lactamase superfamily JGY87_RS08130 PF17770 Ribonuclease J C-terminal domain JGY87_RS08130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JGY87_RS08135 PF01138 3' exoribonuclease family, domain 1 JGY87_RS08135 PF03725 3' exoribonuclease family, domain 2 JGY87_RS08135 PF00575 S1 RNA binding domain JGY87_RS08135 PF00013 KH domain JGY87_RS08135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JGY87_RS08140 PF00312 Ribosomal protein S15 JGY87_RS08145 PF06574 FAD synthetase JGY87_RS08145 PF01687 Riboflavin kinase JGY87_RS08150 PF16198 tRNA pseudouridylate synthase B C-terminal domain JGY87_RS08150 PF01509 TruB family pseudouridylate synthase (N terminal domain) JGY87_RS08155 PF02033 Ribosome-binding factor A JGY87_RS08170 PF00009 Elongation factor Tu GTP binding domain JGY87_RS08170 PF11987 Translation-initiation factor 2 JGY87_RS08170 PF04760 Translation initiation factor IF-2, N-terminal region JGY87_RS08175 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JGY87_RS08180 PF04296 Protein of unknown function (DUF448) JGY87_RS08185 PF08529 NusA N-terminal domain JGY87_RS08185 PF00575 S1 RNA binding domain JGY87_RS08185 PF13184 NusA-like KH domain JGY87_RS08190 PF02576 RimP N-terminal domain JGY87_RS08190 PF17384 RimP C-terminal SH3 domain JGY87_RS08195 PF02811 PHP domain JGY87_RS08195 PF14480 DNA polymerase III polC-type N-terminus I JGY87_RS08195 PF11490 DNA polymerase III polC-type N-terminus II JGY87_RS08195 PF07733 Bacterial DNA polymerase III alpha NTPase domain JGY87_RS08195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JGY87_RS08195 PF14579 Helix-hairpin-helix motif JGY87_RS08195 PF00929 Exonuclease JGY87_RS08200 PF04073 Aminoacyl-tRNA editing domain JGY87_RS08200 PF03129 Anticodon binding domain JGY87_RS08200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JGY87_RS08205 PF02163 Peptidase family M50 JGY87_RS08205 PF13180 PDZ domain JGY87_RS08215 PF01255 Putative undecaprenyl diphosphate synthase JGY87_RS08220 PF01765 Ribosome recycling factor JGY87_RS08225 PF00696 Amino acid kinase family JGY87_RS08230 PF00889 Elongation factor TS JGY87_RS08235 PF00318 Ribosomal protein S2 JGY87_RS08240 PF06018 CodY GAF-like domain JGY87_RS08240 PF08222 CodY helix-turn-helix domain JGY87_RS08245 PF00004 ATPase family associated with various cellular activities (AAA) JGY87_RS08245 PF07724 AAA domain (Cdc48 subfamily) JGY87_RS08245 PF10431 C-terminal, D2-small domain, of ClpB protein JGY87_RS08250 PF00227 Proteasome subunit JGY87_RS08255 PF02899 Phage integrase, N-terminal SAM-like domain JGY87_RS08255 PF00589 Phage integrase family JGY87_RS08260 PF01134 Glucose inhibited division protein A JGY87_RS08265 PF01751 Toprim domain JGY87_RS08265 PF01396 Topoisomerase DNA binding C4 zinc finger JGY87_RS08265 PF01131 DNA topoisomerase JGY87_RS08270 PF18255 DNA processing protein A sterile alpha motif domain JGY87_RS08270 PF02481 DNA recombination-mediator protein A JGY87_RS08275 PF00549 CoA-ligase JGY87_RS08275 PF02629 CoA binding domain JGY87_RS08280 PF08442 ATP-grasp domain JGY87_RS08280 PF00549 CoA-ligase JGY87_RS08285 PF01351 Ribonuclease HII JGY87_RS08290 PF01926 50S ribosome-binding GTPase JGY87_RS08295 PF09586 Bacterial membrane protein YfhO JGY87_RS08305 PF01245 Ribosomal protein L19 JGY87_RS08310 PF01746 tRNA (Guanine-1)-methyltransferase JGY87_RS08315 PF05239 PRC-barrel domain JGY87_RS08315 PF01782 RimM N-terminal domain JGY87_RS08320 PF00886 Ribosomal protein S16 JGY87_RS08330 PF00296 Luciferase-like monooxygenase JGY87_RS08335 PF02881 SRP54-type protein, helical bundle domain JGY87_RS08335 PF02978 Signal peptide binding domain JGY87_RS08335 PF00448 SRP54-type protein, GTPase domain JGY87_RS08340 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JGY87_RS08345 PF00448 SRP54-type protein, GTPase domain JGY87_RS08345 PF02881 SRP54-type protein, helical bundle domain JGY87_RS08350 PF06470 SMC proteins Flexible Hinge Domain JGY87_RS08350 PF02463 RecF/RecN/SMC N terminal domain JGY87_RS08355 PF14622 Ribonuclease-III-like JGY87_RS08355 PF00035 Double-stranded RNA binding motif JGY87_RS08360 PF00550 Phosphopantetheine attachment site JGY87_RS08370 PF00698 Acyl transferase domain JGY87_RS08375 PF02504 Fatty acid synthesis protein JGY87_RS08380 PF01575 MaoC like domain JGY87_RS08385 PF01447 Thermolysin metallopeptidase, catalytic domain JGY87_RS08385 PF02868 Thermolysin metallopeptidase, alpha-helical domain JGY87_RS08385 PF07504 Fungalysin/Thermolysin Propeptide Motif JGY87_RS08385 PF03413 Peptidase propeptide and YPEB domain JGY87_RS08390 PF00270 DEAD/DEAH box helicase JGY87_RS08390 PF00271 Helicase conserved C-terminal domain JGY87_RS08390 PF17191 RecG wedge domain JGY87_RS08395 PF03313 Serine dehydratase alpha chain JGY87_RS08400 PF01842 ACT domain JGY87_RS08400 PF03315 Serine dehydratase beta chain JGY87_RS08405 PF13684 Dihydroxyacetone kinase family JGY87_RS08405 PF02734 DAK2 domain JGY87_RS08410 PF03780 Asp23 family, cell envelope-related function JGY87_RS08415 PF00830 Ribosomal L28 family JGY87_RS08420 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JGY87_RS08420 PF04263 Thiamin pyrophosphokinase, catalytic domain JGY87_RS08425 PF00834 Ribulose-phosphate 3 epimerase family JGY87_RS08430 PF16745 RsgA N-terminal domain JGY87_RS08430 PF03193 RsgA GTPase JGY87_RS08435 PF03793 PASTA domain JGY87_RS08435 PF00069 Protein kinase domain JGY87_RS08445 PF04055 Radical SAM superfamily JGY87_RS08450 PF01189 16S rRNA methyltransferase RsmB/F JGY87_RS08450 PF01029 NusB family JGY87_RS08455 PF02911 Formyl transferase, C-terminal domain JGY87_RS08455 PF00551 Formyl transferase JGY87_RS08460 PF01327 Polypeptide deformylase JGY87_RS08475 PF00271 Helicase conserved C-terminal domain JGY87_RS08475 PF17764 3′ DNA-binding domain (3′BD) JGY87_RS08475 PF18074 Primosomal protein N C-terminal domain JGY87_RS08475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JGY87_RS08475 PF04851 Type III restriction enzyme, res subunit JGY87_RS08480 PF02441 Flavoprotein JGY87_RS08480 PF04127 DNA / pantothenate metabolism flavoprotein JGY87_RS08485 PF01192 RNA polymerase Rpb6 JGY87_RS08490 PF00625 Guanylate kinase JGY87_RS08495 PF05670 NFACT protein RNA binding domain JGY87_RS08505 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JGY87_RS08505 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JGY87_RS08515 PF00156 Phosphoribosyl transferase domain JGY87_RS08520 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JGY87_RS08525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JGY87_RS08525 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JGY87_RS08525 PF02142 MGS-like domain JGY87_RS08530 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JGY87_RS08530 PF00117 Glutamine amidotransferase class-I JGY87_RS08535 PF01979 Amidohydrolase family JGY87_RS08540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JGY87_RS08540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JGY87_RS08545 PF00860 Permease family JGY87_RS08550 PF00156 Phosphoribosyl transferase domain JGY87_RS08555 PF00849 RNA pseudouridylate synthase JGY87_RS08555 PF01479 S4 domain JGY87_RS08560 PF01252 Signal peptidase (SPase) II JGY87_RS08570 PF06827 Zinc finger found in FPG and IleRS JGY87_RS08570 PF08264 Anticodon-binding domain of tRNA JGY87_RS08570 PF00133 tRNA synthetases class I (I, L, M and V) JGY87_RS08575 PF05103 DivIVA protein JGY87_RS08585 PF02325 YGGT family JGY87_RS08590 PF04472 Cell division protein SepF JGY87_RS08595 PF01168 Alanine racemase, N-terminal domain JGY87_RS08600 PF02578 Multi-copper polyphenol oxidoreductase laccase JGY87_RS08605 PF12327 FtsZ family, C-terminal domain JGY87_RS08605 PF00091 Tubulin/FtsZ family, GTPase domain JGY87_RS08610 PF02491 SHS2 domain inserted in FTSA JGY87_RS08615 PF08478 POTRA domain, FtsQ-type JGY87_RS08615 PF03799 Cell division protein FtsQ JGY87_RS08620 PF02875 Mur ligase family, glutamate ligase domain JGY87_RS08620 PF08245 Mur ligase middle domain JGY87_RS08625 PF00953 Glycosyl transferase family 4 JGY87_RS08630 PF03793 PASTA domain JGY87_RS08630 PF00905 Penicillin binding protein transpeptidase domain JGY87_RS08630 PF03717 Penicillin-binding Protein dimerisation domain JGY87_RS08635 PF04977 Septum formation initiator JGY87_RS08640 PF01795 MraW methylase family JGY87_RS08645 PF02381 MraZ protein, putative antitoxin-like JGY87_RS08650 PF10079 Bacillithiol biosynthesis BshC JGY87_RS08655 PF13673 Acetyltransferase (GNAT) domain JGY87_RS08660 PF13419 Haloacid dehalogenase-like hydrolase JGY87_RS08665 PF05480 Staphylococcus haemolytic protein JGY87_RS08675 PF05480 Staphylococcus haemolytic protein JGY87_RS08685 PF05480 Staphylococcus haemolytic protein JGY87_RS08695 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JGY87_RS08695 PF00535 Glycosyl transferase family 2 JGY87_RS08735 PF01725 Ham1 family JGY87_RS08740 PF01177 Asp/Glu/Hydantoin racemase JGY87_RS08745 PF13085 2Fe-2S iron-sulfur cluster binding domain JGY87_RS08745 PF13183 4Fe-4S dicluster domain JGY87_RS08750 PF02910 Fumarate reductase flavoprotein C-term JGY87_RS08750 PF00890 FAD binding domain JGY87_RS08755 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JGY87_RS08760 PF01541 GIY-YIG catalytic domain JGY87_RS08760 PF02151 UvrB/uvrC motif JGY87_RS08760 PF08459 UvrC Helix-hairpin-helix N-terminal JGY87_RS08765 PF00085 Thioredoxin JGY87_RS08770 PF00488 MutS domain V JGY87_RS08770 PF01713 Smr domain JGY87_RS08775 PF02811 PHP domain JGY87_RS08775 PF14791 DNA polymerase beta thumb JGY87_RS08775 PF14716 Helix-hairpin-helix domain JGY87_RS08785 PF05164 Cell division protein ZapA JGY87_RS08790 PF11858 Domain of unknown function (DUF3378) JGY87_RS08790 PF01351 Ribonuclease HII JGY87_RS08795 PF03484 tRNA synthetase B5 domain JGY87_RS08795 PF03147 Ferredoxin-fold anticodon binding domain JGY87_RS08795 PF01588 Putative tRNA binding domain JGY87_RS08795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JGY87_RS08795 PF03483 B3/4 domain JGY87_RS08800 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JGY87_RS08800 PF01409 tRNA synthetases class II core domain (F) JGY87_RS08805 PF00588 SpoU rRNA Methylase family JGY87_RS08805 PF08032 RNA 2'-O ribose methyltransferase substrate binding JGY87_RS08815 PF01783 Ribosomal L32p protein family JGY87_RS08825 PF05636 HIGH Nucleotidyl Transferase JGY87_RS08830 PF01467 Cytidylyltransferase-like JGY87_RS08845 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JGY87_RS08850 PF03009 Glycerophosphoryl diester phosphodiesterase family JGY87_RS08855 PF06133 Control of competence regulator ComK, YlbF/YmcA JGY87_RS08865 PF00005 ABC transporter JGY87_RS08865 PF17755 UvrA DNA-binding domain JGY87_RS08865 PF17760 UvrA interaction domain JGY87_RS08875 PF01040 UbiA prenyltransferase family JGY87_RS08880 PF02628 Cytochrome oxidase assembly protein JGY87_RS08885 PF00364 Biotin-requiring enzyme JGY87_RS08885 PF02785 Biotin carboxylase C-terminal domain JGY87_RS08885 PF00289 Biotin carboxylase, N-terminal domain JGY87_RS08885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JGY87_RS08885 PF00682 HMGL-like JGY87_RS08885 PF02436 Conserved carboxylase domain JGY87_RS08890 PF01098 Cell cycle protein JGY87_RS08895 PF07408 Protein of unknown function (DUF1507) JGY87_RS08905 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JGY87_RS08910 PF00009 Elongation factor Tu GTP binding domain JGY87_RS08910 PF14492 Elongation Factor G, domain II JGY87_RS08910 PF00679 Elongation factor G C-terminus JGY87_RS08910 PF03144 Elongation factor Tu domain 2 JGY87_RS08920 PF00459 Inositol monophosphatase family JGY87_RS08925 PF06335 Protein of unknown function (DUF1054) JGY87_RS08935 PF01566 Natural resistance-associated macrophage protein JGY87_RS08945 PF13416 Bacterial extracellular solute-binding protein JGY87_RS08950 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS08955 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS08960 PF08402 TOBE domain JGY87_RS08960 PF00005 ABC transporter JGY87_RS08970 PF05256 Uncharacterised protein family (UPF0223) JGY87_RS08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS08975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JGY87_RS08980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JGY87_RS08980 PF02817 e3 binding domain JGY87_RS08980 PF00364 Biotin-requiring enzyme JGY87_RS08985 PF02780 Transketolase, C-terminal domain JGY87_RS08985 PF02779 Transketolase, pyrimidine binding domain JGY87_RS08990 PF00676 Dehydrogenase E1 component JGY87_RS09000 PF01327 Polypeptide deformylase JGY87_RS09010 PF07288 Protein of unknown function (DUF1447) JGY87_RS09015 PF00753 Metallo-beta-lactamase superfamily JGY87_RS09015 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JGY87_RS09015 PF17770 Ribonuclease J C-terminal domain JGY87_RS09020 PF02080 TrkA-C domain JGY87_RS09020 PF02254 TrkA-N domain JGY87_RS09025 PF02322 Cytochrome bd terminal oxidase subunit II JGY87_RS09030 PF01654 Cytochrome bd terminal oxidase subunit I JGY87_RS09040 PF02896 PEP-utilising enzyme, TIM barrel domain JGY87_RS09040 PF00391 PEP-utilising enzyme, mobile domain JGY87_RS09040 PF05524 PEP-utilising enzyme, N-terminal JGY87_RS09045 PF00381 PTS HPr component phosphorylation site JGY87_RS09055 PF10672 S-adenosylmethionine-dependent methyltransferase JGY87_RS09055 PF17785 PUA-like domain JGY87_RS09075 PF00005 ABC transporter JGY87_RS09085 PF02843 Phosphoribosylglycinamide synthetase, C domain JGY87_RS09085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JGY87_RS09085 PF02844 Phosphoribosylglycinamide synthetase, N domain JGY87_RS09090 PF01808 AICARFT/IMPCHase bienzyme JGY87_RS09090 PF02142 MGS-like domain JGY87_RS09095 PF00551 Formyl transferase JGY87_RS09100 PF02769 AIR synthase related protein, C-terminal domain JGY87_RS09100 PF00586 AIR synthase related protein, N-terminal domain JGY87_RS09105 PF13537 Glutamine amidotransferase domain JGY87_RS09105 PF00156 Phosphoribosyl transferase domain JGY87_RS09110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JGY87_RS09110 PF02769 AIR synthase related protein, C-terminal domain JGY87_RS09110 PF00586 AIR synthase related protein, N-terminal domain JGY87_RS09120 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JGY87_RS09125 PF01259 SAICAR synthetase JGY87_RS09130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS09130 PF02222 ATP-grasp domain JGY87_RS09130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JGY87_RS09135 PF00731 AIR carboxylase JGY87_RS09140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JGY87_RS09140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JGY87_RS09145 PF00175 Oxidoreductase NAD-binding domain JGY87_RS09145 PF00970 Oxidoreductase FAD-binding domain JGY87_RS09145 PF00042 Globin JGY87_RS09155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JGY87_RS09155 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JGY87_RS09160 PF00115 Cytochrome C and Quinol oxidase polypeptide I JGY87_RS09165 PF00510 Cytochrome c oxidase subunit III JGY87_RS09170 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JGY87_RS09175 PF01156 Inosine-uridine preferring nucleoside hydrolase JGY87_RS09180 PF00144 Beta-lactamase JGY87_RS09185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JGY87_RS09185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JGY87_RS09185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JGY87_RS09185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JGY87_RS09190 PF03816 Cell envelope-related transcriptional attenuator domain JGY87_RS09195 PF10804 Protein of unknown function (DUF2538) JGY87_RS09200 PF13673 Acetyltransferase (GNAT) domain JGY87_RS09205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JGY87_RS09205 PF13457 GW (Gly-Tryp) dipeptide domain JGY87_RS09205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JGY87_RS09205 PF13457 GW (Gly-Tryp) dipeptide domain JGY87_RS09215 PF01757 Acyltransferase family JGY87_RS09220 PF00155 Aminotransferase class I and II JGY87_RS09225 PF01047 MarR family JGY87_RS09230 PF00378 Enoyl-CoA hydratase/isomerase JGY87_RS09235 PF00561 alpha/beta hydrolase fold JGY87_RS09240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JGY87_RS09240 PF16582 Middle domain of thiamine pyrophosphate JGY87_RS09245 PF00425 chorismate binding enzyme JGY87_RS09250 PF01040 UbiA prenyltransferase family JGY87_RS09260 PF05154 TM2 domain JGY87_RS09280 PF06338 ComK protein JGY87_RS09290 PF10437 Bacterial lipoate protein ligase C-terminus JGY87_RS09290 PF03099 Biotin/lipoate A/B protein ligase family JGY87_RS09295 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JGY87_RS09305 PF02872 5'-nucleotidase, C-terminal domain JGY87_RS09305 PF00149 Calcineurin-like phosphoesterase JGY87_RS09310 PF02386 Cation transport protein JGY87_RS09315 PF13180 PDZ domain JGY87_RS09320 PF03741 Integral membrane protein TerC family JGY87_RS09325 PF16658 Class II release factor RF3, C-terminal domain JGY87_RS09325 PF03144 Elongation factor Tu domain 2 JGY87_RS09325 PF00009 Elongation factor Tu GTP binding domain JGY87_RS09335 PF08245 Mur ligase middle domain JGY87_RS09335 PF02875 Mur ligase family, glutamate ligase domain JGY87_RS09335 PF01225 Mur ligase family, catalytic domain JGY87_RS09340 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JGY87_RS09340 PF04101 Glycosyltransferase family 28 C-terminal domain JGY87_RS09345 PF07690 Major Facilitator Superfamily JGY87_RS09355 PF00756 Putative esterase JGY87_RS09360 PF01235 Sodium:alanine symporter family JGY87_RS09365 PF01594 AI-2E family transporter JGY87_RS09375 PF02254 TrkA-N domain JGY87_RS09375 PF00999 Sodium/hydrogen exchanger family JGY87_RS09375 PF02080 TrkA-C domain JGY87_RS09380 PF00571 CBS domain JGY87_RS09380 PF01769 Divalent cation transporter JGY87_RS09380 PF03448 MgtE intracellular N domain JGY87_RS09385 PF00849 RNA pseudouridylate synthase JGY87_RS09390 PF01513 ATP-NAD kinase JGY87_RS09395 PF04607 Region found in RelA / SpoT proteins JGY87_RS09410 PF01152 Bacterial-like globin JGY87_RS09420 PF01432 Peptidase family M3 JGY87_RS09420 PF08439 Oligopeptidase F JGY87_RS09430 PF05389 Negative regulator of genetic competence (MecA) JGY87_RS09435 PF03960 ArsC family JGY87_RS09440 PF00579 tRNA synthetases class I (W and Y) JGY87_RS09445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JGY87_RS09450 PF00005 ABC transporter JGY87_RS09450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JGY87_RS09455 PF00005 ABC transporter JGY87_RS09455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JGY87_RS09460 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS09460 PF12911 N-terminal TM domain of oligopeptide transport permease C JGY87_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS09480 PF00109 Beta-ketoacyl synthase, N-terminal domain JGY87_RS09480 PF02801 Beta-ketoacyl synthase, C-terminal domain JGY87_RS09485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JGY87_RS09485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JGY87_RS09495 PF00004 ATPase family associated with various cellular activities (AAA) JGY87_RS09495 PF07724 AAA domain (Cdc48 subfamily) JGY87_RS09495 PF17871 AAA lid domain JGY87_RS09495 PF02861 Clp amino terminal domain, pathogenicity island component JGY87_RS09495 PF10431 C-terminal, D2-small domain, of ClpB protein JGY87_RS09500 PF01757 Acyltransferase family JGY87_RS09505 PF01883 Iron-sulfur cluster assembly protein JGY87_RS09515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS09515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JGY87_RS09520 PF07457 Protein of unknown function (DUF1516) JGY87_RS09525 PF01557 Fumarylacetoacetate (FAA) hydrolase family JGY87_RS09530 PF04235 Protein of unknown function (DUF418) JGY87_RS09535 PF12705 PD-(D/E)XK nuclease superfamily JGY87_RS09535 PF00580 UvrD/REP helicase N-terminal domain JGY87_RS09535 PF13361 UvrD-like helicase C-terminal domain JGY87_RS09540 PF12705 PD-(D/E)XK nuclease superfamily JGY87_RS09540 PF13361 UvrD-like helicase C-terminal domain JGY87_RS09545 PF10502 Signal peptidase, peptidase S26 JGY87_RS09550 PF10502 Signal peptidase, peptidase S26 JGY87_RS09555 PF09335 SNARE associated Golgi protein JGY87_RS09560 PF00342 Phosphoglucose isomerase JGY87_RS09565 PF00764 Arginosuccinate synthase JGY87_RS09570 PF14698 Argininosuccinate lyase C-terminal JGY87_RS09570 PF00206 Lyase JGY87_RS09575 PF03009 Glycerophosphoryl diester phosphodiesterase family JGY87_RS09580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JGY87_RS09580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JGY87_RS09585 PF00202 Aminotransferase class-III JGY87_RS09590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JGY87_RS09595 PF00575 S1 RNA binding domain JGY87_RS09600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JGY87_RS09610 PF13244 Domain of unknown function (DUF4040) JGY87_RS09610 PF00361 Proton-conducting membrane transporter JGY87_RS09610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JGY87_RS09615 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JGY87_RS09620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JGY87_RS09625 PF00361 Proton-conducting membrane transporter JGY87_RS09630 PF01899 Na+/H+ ion antiporter subunit JGY87_RS09635 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JGY87_RS09640 PF03334 Na+/H+ antiporter subunit JGY87_RS09655 PF03061 Thioesterase superfamily JGY87_RS09660 PF03553 Na+/H+ antiporter family JGY87_RS09660 PF13726 Na+-H+ antiporter family JGY87_RS09665 PF00883 Cytosol aminopeptidase family, catalytic domain JGY87_RS09665 PF02789 Cytosol aminopeptidase family, N-terminal domain JGY87_RS09670 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS09675 PF01521 Iron-sulphur cluster biosynthesis JGY87_RS09680 PF07293 Protein of unknown function (DUF1450) JGY87_RS09685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS09690 PF07315 Protein of unknown function (DUF1462) JGY87_RS09695 PF01106 NifU-like domain JGY87_RS09700 PF04914 DltD protein JGY87_RS09705 PF00550 Phosphopantetheine attachment site JGY87_RS09710 PF03062 MBOAT, membrane-bound O-acyltransferase family JGY87_RS09715 PF00501 AMP-binding enzyme JGY87_RS09715 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS09725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JGY87_RS09725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JGY87_RS09730 PF13344 Haloacid dehalogenase-like hydrolase JGY87_RS09735 PF01934 Protein of unknown function DUF86 JGY87_RS09745 PF06265 Protein of unknown function (DUF1027) JGY87_RS09750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JGY87_RS09750 PF04055 Radical SAM superfamily JGY87_RS09755 PF02872 5'-nucleotidase, C-terminal domain JGY87_RS09760 PF01925 Sulfite exporter TauE/SafE JGY87_RS09765 PF01904 Protein of unknown function DUF72 JGY87_RS09770 PF03060 Nitronate monooxygenase JGY87_RS09775 PF03471 Transporter associated domain JGY87_RS09775 PF00571 CBS domain JGY87_RS09775 PF01595 Cyclin M transmembrane N-terminal domain JGY87_RS09785 PF00583 Acetyltransferase (GNAT) family JGY87_RS09790 PF06146 Phosphate-starvation-inducible E JGY87_RS09795 PF01458 Uncharacterized protein family (UPF0051) JGY87_RS09800 PF01592 NifU-like N terminal domain JGY87_RS09805 PF00266 Aminotransferase class-V JGY87_RS09810 PF01458 Uncharacterized protein family (UPF0051) JGY87_RS09815 PF00005 ABC transporter JGY87_RS09825 PF01595 Cyclin M transmembrane N-terminal domain JGY87_RS09825 PF03471 Transporter associated domain JGY87_RS09825 PF00571 CBS domain JGY87_RS09835 PF03180 NLPA lipoprotein JGY87_RS09840 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS09845 PF00005 ABC transporter JGY87_RS09845 PF09383 NIL domain JGY87_RS09850 PF00085 Thioredoxin JGY87_RS09855 PF01751 Toprim domain JGY87_RS09860 PF01597 Glycine cleavage H-protein JGY87_RS09865 PF03960 ArsC family JGY87_RS09870 PF00085 Thioredoxin JGY87_RS09875 PF00881 Nitroreductase family JGY87_RS09880 PF01487 Type I 3-dehydroquinase JGY87_RS09885 PF02566 OsmC-like protein JGY87_RS09900 PF03600 Citrate transporter JGY87_RS09915 PF05154 TM2 domain JGY87_RS09955 PF13673 Acetyltransferase (GNAT) domain JGY87_RS09960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS09975 PF12146 Serine aminopeptidase, S33 JGY87_RS10005 PF01022 Bacterial regulatory protein, arsR family JGY87_RS10015 PF05257 CHAP domain JGY87_RS10015 PF01476 LysM domain JGY87_RS10025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS10070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JGY87_RS10090 PF01668 SmpB protein JGY87_RS10095 PF08206 Ribonuclease B OB domain JGY87_RS10095 PF00773 RNB domain JGY87_RS10095 PF00575 S1 RNA binding domain JGY87_RS10095 PF17876 Cold shock domain JGY87_RS10100 PF12146 Serine aminopeptidase, S33 JGY87_RS10105 PF03840 Preprotein translocase SecG subunit JGY87_RS10115 PF00113 Enolase, C-terminal TIM barrel domain JGY87_RS10115 PF03952 Enolase, N-terminal domain JGY87_RS10120 PF01676 Metalloenzyme superfamily JGY87_RS10120 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JGY87_RS10125 PF00121 Triosephosphate isomerase JGY87_RS10130 PF00162 Phosphoglycerate kinase JGY87_RS10135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JGY87_RS10135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JGY87_RS10140 PF04198 Putative sugar-binding domain JGY87_RS10155 PF08338 Domain of unknown function (DUF1731) JGY87_RS10155 PF01370 NAD dependent epimerase/dehydratase family JGY87_RS10165 PF00574 Clp protease JGY87_RS10175 PF14527 WhiA LAGLIDADG-like domain JGY87_RS10175 PF02650 WhiA C-terminal HTH domain JGY87_RS10175 PF10298 WhiA N-terminal LAGLIDADG-like domain JGY87_RS10180 PF01933 Uncharacterised protein family UPF0052 JGY87_RS10185 PF03668 P-loop ATPase protein family JGY87_RS10190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS10200 PF14602 Hexapeptide repeat of succinyl-transferase JGY87_RS10205 PF01790 Prolipoprotein diacylglyceryl transferase JGY87_RS10210 PF07475 HPr Serine kinase C-terminal domain JGY87_RS10210 PF02603 HPr Serine kinase N terminus JGY87_RS10215 PF00005 ABC transporter JGY87_RS10215 PF17760 UvrA interaction domain JGY87_RS10215 PF17755 UvrA DNA-binding domain JGY87_RS10220 PF17757 UvrB interaction domain JGY87_RS10220 PF12344 Ultra-violet resistance protein B JGY87_RS10220 PF02151 UvrB/uvrC motif JGY87_RS10220 PF04851 Type III restriction enzyme, res subunit JGY87_RS10220 PF00271 Helicase conserved C-terminal domain JGY87_RS10235 PF05257 CHAP domain JGY87_RS10235 PF01476 LysM domain JGY87_RS10245 PF07516 SecA Wing and Scaffold domain JGY87_RS10245 PF01043 SecA preprotein cross-linking domain JGY87_RS10245 PF07517 SecA DEAD-like domain JGY87_RS10245 PF02810 SEC-C motif JGY87_RS10250 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JGY87_RS10250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JGY87_RS10260 PF00271 Helicase conserved C-terminal domain JGY87_RS10260 PF04851 Type III restriction enzyme, res subunit JGY87_RS10265 PF02645 Uncharacterised protein, DegV family COG1307 JGY87_RS10270 PF09186 Domain of unknown function (DUF1949) JGY87_RS10270 PF01205 Uncharacterized protein family UPF0029 JGY87_RS10275 PF00953 Glycosyl transferase family 4 JGY87_RS10280 PF07694 5TMR of 5TMR-LYT JGY87_RS10280 PF00990 Diguanylate cyclase, GGDEF domain JGY87_RS10295 PF01546 Peptidase family M20/M25/M40 JGY87_RS10295 PF07687 Peptidase dimerisation domain JGY87_RS10300 PF02595 Glycerate kinase family JGY87_RS10320 PF01565 FAD binding domain JGY87_RS10320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JGY87_RS10335 PF01497 Periplasmic binding protein JGY87_RS10340 PF00005 ABC transporter JGY87_RS10345 PF01032 FecCD transport family JGY87_RS10350 PF01032 FecCD transport family JGY87_RS10355 PF00268 Ribonucleotide reductase, small chain JGY87_RS10360 PF02867 Ribonucleotide reductase, barrel domain JGY87_RS10360 PF00317 Ribonucleotide reductase, all-alpha domain JGY87_RS10360 PF08343 Ribonucleotide reductase N-terminal JGY87_RS10365 PF07972 NrdI Flavodoxin like JGY87_RS10375 PF14489 QueF-like protein JGY87_RS10380 PF00854 POT family JGY87_RS10385 PF00854 POT family JGY87_RS10390 PF00781 Diacylglycerol kinase catalytic domain JGY87_RS10395 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JGY87_RS10400 PF00155 Aminotransferase class I and II JGY87_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component JGY87_RS10410 PF00571 CBS domain JGY87_RS10410 PF00005 ABC transporter JGY87_RS10415 PF00570 HRDC domain JGY87_RS10415 PF00270 DEAD/DEAH box helicase JGY87_RS10415 PF16124 RecQ zinc-binding JGY87_RS10415 PF09382 RQC domain JGY87_RS10415 PF00271 Helicase conserved C-terminal domain JGY87_RS10420 PF00005 ABC transporter JGY87_RS10420 PF16326 ABC transporter C-terminal domain JGY87_RS10420 PF12848 ABC transporter JGY87_RS10425 PF02535 ZIP Zinc transporter JGY87_RS10430 PF00884 Sulfatase JGY87_RS10440 PF02682 Carboxyltransferase domain, subdomain C and D JGY87_RS10455 PF00425 chorismate binding enzyme JGY87_RS10455 PF04715 Anthranilate synthase component I, N terminal region JGY87_RS10460 PF00591 Glycosyl transferase family, a/b domain JGY87_RS10460 PF02885 Glycosyl transferase family, helical bundle domain JGY87_RS10460 PF00117 Glutamine amidotransferase class-I JGY87_RS10465 PF06508 Queuosine biosynthesis protein QueC JGY87_RS10470 PF01242 6-pyruvoyl tetrahydropterin synthase JGY87_RS10475 PF04055 Radical SAM superfamily JGY87_RS10490 PF00535 Glycosyl transferase family 2 JGY87_RS10495 PF00248 Aldo/keto reductase family JGY87_RS10500 PF00571 CBS domain JGY87_RS10500 PF01595 Cyclin M transmembrane N-terminal domain JGY87_RS10500 PF03471 Transporter associated domain JGY87_RS10505 PF01979 Amidohydrolase family JGY87_RS10510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JGY87_RS10510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JGY87_RS10515 PF00294 pfkB family carbohydrate kinase JGY87_RS10520 PF08220 DeoR-like helix-turn-helix domain JGY87_RS10520 PF00455 DeoR C terminal sensor domain JGY87_RS10525 PF04073 Aminoacyl-tRNA editing domain JGY87_RS10530 PF00483 Nucleotidyl transferase JGY87_RS10540 PF07690 Major Facilitator Superfamily JGY87_RS10560 PF00056 lactate/malate dehydrogenase, NAD binding domain JGY87_RS10560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JGY87_RS10565 PF09335 SNARE associated Golgi protein JGY87_RS10575 PF00248 Aldo/keto reductase family JGY87_RS10580 PF07683 Cobalamin synthesis protein cobW C-terminal domain JGY87_RS10580 PF02492 CobW/HypB/UreG, nucleotide-binding domain JGY87_RS10585 PF01047 MarR family JGY87_RS10590 PF00664 ABC transporter transmembrane region JGY87_RS10590 PF00005 ABC transporter JGY87_RS10595 PF00664 ABC transporter transmembrane region JGY87_RS10595 PF00005 ABC transporter JGY87_RS10600 PF02673 Bacitracin resistance protein BacA JGY87_RS10610 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JGY87_RS10615 PF03641 Possible lysine decarboxylase JGY87_RS10620 PF01810 LysE type translocator JGY87_RS10625 PF00155 Aminotransferase class I and II JGY87_RS10625 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS10655 PF07690 Major Facilitator Superfamily JGY87_RS10660 PF04306 Protein of unknown function (DUF456) JGY87_RS10665 PF07690 Major Facilitator Superfamily JGY87_RS10670 PF03466 LysR substrate binding domain JGY87_RS10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS10680 PF01717 Cobalamin-independent synthase, Catalytic domain JGY87_RS10690 PF01709 Transcriptional regulator JGY87_RS10710 PF05257 CHAP domain JGY87_RS10710 PF01476 LysM domain JGY87_RS10715 PF01384 Phosphate transporter family JGY87_RS10720 PF01865 Protein of unknown function DUF47 JGY87_RS10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS10730 PF00486 Transcriptional regulatory protein, C terminal JGY87_RS10730 PF00072 Response regulator receiver domain JGY87_RS10735 PF01370 NAD dependent epimerase/dehydratase family JGY87_RS10745 PF07859 alpha/beta hydrolase fold JGY87_RS10760 PF03610 PTS system fructose IIA component JGY87_RS10765 PF02734 DAK2 domain JGY87_RS10770 PF02733 Dak1 domain JGY87_RS10775 PF01032 FecCD transport family JGY87_RS10780 PF01032 FecCD transport family JGY87_RS10785 PF00005 ABC transporter JGY87_RS10790 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JGY87_RS10790 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JGY87_RS10795 PF07662 Na+ dependent nucleoside transporter C-terminus JGY87_RS10795 PF01773 Na+ dependent nucleoside transporter N-terminus JGY87_RS10800 PF00664 ABC transporter transmembrane region JGY87_RS10800 PF00005 ABC transporter JGY87_RS10805 PF07943 Penicillin-binding protein 5, C-terminal domain JGY87_RS10805 PF00768 D-alanyl-D-alanine carboxypeptidase JGY87_RS10810 PF01467 Cytidylyltransferase-like JGY87_RS10815 PF00535 Glycosyl transferase family 2 JGY87_RS10820 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS10825 PF01061 ABC-2 type transporter JGY87_RS10830 PF00005 ABC transporter JGY87_RS10835 PF03808 Glycosyl transferase WecB/TagA/CpsF family JGY87_RS10845 PF02742 Iron dependent repressor, metal binding and dimerisation domain JGY87_RS10845 PF01325 Iron dependent repressor, N-terminal DNA binding domain JGY87_RS10850 PF00005 ABC transporter JGY87_RS10855 PF00950 ABC 3 transport family JGY87_RS10860 PF01297 Zinc-uptake complex component A periplasmic JGY87_RS10865 PF00999 Sodium/hydrogen exchanger family JGY87_RS10870 PF03334 Na+/H+ antiporter subunit JGY87_RS10875 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JGY87_RS10880 PF01899 Na+/H+ ion antiporter subunit JGY87_RS10885 PF00361 Proton-conducting membrane transporter JGY87_RS10890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JGY87_RS10895 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JGY87_RS10900 PF13244 Domain of unknown function (DUF4040) JGY87_RS10900 PF00361 Proton-conducting membrane transporter JGY87_RS10900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JGY87_RS10940 PF00561 alpha/beta hydrolase fold JGY87_RS10955 PF00561 alpha/beta hydrolase fold JGY87_RS10965 PF01032 FecCD transport family JGY87_RS10970 PF01497 Periplasmic binding protein JGY87_RS10980 PF03485 Arginyl tRNA synthetase N terminal domain JGY87_RS10980 PF05746 DALR anticodon binding domain JGY87_RS10980 PF00750 tRNA synthetases class I (R) JGY87_RS10990 PF08741 YwhD family JGY87_RS10995 PF01966 HD domain JGY87_RS11000 PF00583 Acetyltransferase (GNAT) family JGY87_RS11005 PF03358 NADPH-dependent FMN reductase JGY87_RS11010 PF00248 Aldo/keto reductase family JGY87_RS11015 PF07293 Protein of unknown function (DUF1450) JGY87_RS11020 PF08544 GHMP kinases C terminal JGY87_RS11020 PF00288 GHMP kinases N terminal domain JGY87_RS11030 PF00288 GHMP kinases N terminal domain JGY87_RS11035 PF03099 Biotin/lipoate A/B protein ligase family JGY87_RS11040 PF01515 Phosphate acetyl/butaryl transferase JGY87_RS11045 PF06778 Chlorite dismutase JGY87_RS11065 PF04241 Protein of unknown function (DUF423) JGY87_RS11075 PF03167 Uracil DNA glycosylase superfamily JGY87_RS11080 PF08543 Phosphomethylpyrimidine kinase JGY87_RS11085 PF17412 Family of unknown function JGY87_RS11095 PF07690 Major Facilitator Superfamily JGY87_RS11110 PF02803 Thiolase, C-terminal domain JGY87_RS11110 PF00108 Thiolase, N-terminal domain JGY87_RS11115 PF00501 AMP-binding enzyme JGY87_RS11120 PF00390 Malic enzyme, N-terminal domain JGY87_RS11120 PF03949 Malic enzyme, NAD binding domain JGY87_RS11125 PF03390 2-hydroxycarboxylate transporter family JGY87_RS11130 PF02567 Phenazine biosynthesis-like protein JGY87_RS11140 PF03992 Antibiotic biosynthesis monooxygenase JGY87_RS11160 PF04304 Protein of unknown function (DUF454) JGY87_RS11165 PF00072 Response regulator receiver domain JGY87_RS11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JGY87_RS11170 PF00989 PAS fold JGY87_RS11170 PF17203 Single cache domain 3 JGY87_RS11170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JGY87_RS11175 PF01380 SIS domain JGY87_RS11180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JGY87_RS11185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JGY87_RS11195 PF02585 GlcNAc-PI de-N-acetylase JGY87_RS11200 PF02649 Type I GTP cyclohydrolase folE2 JGY87_RS11215 PF03358 NADPH-dependent FMN reductase JGY87_RS11225 PF14437 MafB19-like deaminase JGY87_RS11230 PF01712 Deoxynucleoside kinase JGY87_RS11235 PF01712 Deoxynucleoside kinase JGY87_RS11245 PF13419 Haloacid dehalogenase-like hydrolase JGY87_RS11260 PF01063 Amino-transferase class IV JGY87_RS11265 PF01370 NAD dependent epimerase/dehydratase family JGY87_RS11280 PF02525 Flavodoxin-like fold JGY87_RS11285 PF00296 Luciferase-like monooxygenase JGY87_RS11305 PF03737 Aldolase/RraA JGY87_RS11315 PF08274 PhnA Zinc-Ribbon JGY87_RS11315 PF03831 PhnA domain JGY87_RS11325 PF00324 Amino acid permease JGY87_RS11330 PF00487 Fatty acid desaturase JGY87_RS11335 PF17961 Bacterial Ig domain JGY87_RS11335 PF02986 Fibronectin binding repeat JGY87_RS11335 PF00746 LPXTG cell wall anchor motif JGY87_RS11335 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JGY87_RS11335 PF04650 YSIRK type signal peptide JGY87_RS11340 PF02574 Homocysteine S-methyltransferase JGY87_RS11345 PF00324 Amino acid permease JGY87_RS11350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JGY87_RS11350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JGY87_RS11355 PF00491 Arginase family JGY87_RS11360 PF01566 Natural resistance-associated macrophage protein JGY87_RS11365 PF00550 Phosphopantetheine attachment site JGY87_RS11365 PF00668 Condensation domain JGY87_RS11365 PF00501 AMP-binding enzyme JGY87_RS11365 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS11375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JGY87_RS11375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JGY87_RS11380 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS11380 PF00107 Zinc-binding dehydrogenase JGY87_RS11385 PF07690 Major Facilitator Superfamily JGY87_RS11390 PF00455 DeoR C terminal sensor domain JGY87_RS11390 PF08220 DeoR-like helix-turn-helix domain JGY87_RS11395 PF00664 ABC transporter transmembrane region JGY87_RS11395 PF00005 ABC transporter JGY87_RS11400 PF00106 short chain dehydrogenase JGY87_RS11405 PF03786 D-mannonate dehydratase (UxuA) JGY87_RS11410 PF02614 Glucuronate isomerase JGY87_RS11415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JGY87_RS11425 PF03480 Bacterial extracellular solute-binding protein, family 7 JGY87_RS11430 PF00294 pfkB family carbohydrate kinase JGY87_RS11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS11445 PF03466 LysR substrate binding domain JGY87_RS11450 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JGY87_RS11460 PF02447 GntP family permease JGY87_RS11465 PF00248 Aldo/keto reductase family JGY87_RS11470 PF08803 Putative mono-oxygenase ydhR JGY87_RS11480 PF00768 D-alanyl-D-alanine carboxypeptidase JGY87_RS11480 PF07943 Penicillin-binding protein 5, C-terminal domain JGY87_RS11485 PF02423 Ornithine cyclodeaminase/mu-crystallin family JGY87_RS11500 PF01144 Coenzyme A transferase JGY87_RS11505 PF01144 Coenzyme A transferase JGY87_RS11515 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS11540 PF00155 Aminotransferase class I and II JGY87_RS11545 PF01546 Peptidase family M20/M25/M40 JGY87_RS11545 PF07687 Peptidase dimerisation domain JGY87_RS11550 PF00009 Elongation factor Tu GTP binding domain JGY87_RS11550 PF03144 Elongation factor Tu domain 2 JGY87_RS11550 PF03143 Elongation factor Tu C-terminal domain JGY87_RS11555 PF00679 Elongation factor G C-terminus JGY87_RS11555 PF14492 Elongation Factor G, domain II JGY87_RS11555 PF03764 Elongation factor G, domain IV JGY87_RS11555 PF00009 Elongation factor Tu GTP binding domain JGY87_RS11555 PF03144 Elongation factor Tu domain 2 JGY87_RS11560 PF00177 Ribosomal protein S7p/S5e JGY87_RS11565 PF00164 Ribosomal protein S12/S23 JGY87_RS11570 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JGY87_RS11575 PF04997 RNA polymerase Rpb1, domain 1 JGY87_RS11575 PF00623 RNA polymerase Rpb1, domain 2 JGY87_RS11575 PF04983 RNA polymerase Rpb1, domain 3 JGY87_RS11575 PF05000 RNA polymerase Rpb1, domain 4 JGY87_RS11575 PF04998 RNA polymerase Rpb1, domain 5 JGY87_RS11580 PF10385 RNA polymerase beta subunit external 1 domain JGY87_RS11580 PF04563 RNA polymerase beta subunit JGY87_RS11580 PF04561 RNA polymerase Rpb2, domain 2 JGY87_RS11580 PF04565 RNA polymerase Rpb2, domain 3 JGY87_RS11580 PF00562 RNA polymerase Rpb2, domain 6 JGY87_RS11580 PF04560 RNA polymerase Rpb2, domain 7 JGY87_RS11585 PF05175 Methyltransferase small domain JGY87_RS11590 PF00542 Ribosomal protein L7/L12 C-terminal domain JGY87_RS11590 PF16320 Ribosomal protein L7/L12 dimerisation domain JGY87_RS11595 PF00466 Ribosomal protein L10 JGY87_RS11600 PF00687 Ribosomal protein L1p/L10e family JGY87_RS11605 PF03946 Ribosomal protein L11, N-terminal domain JGY87_RS11605 PF00298 Ribosomal protein L11, RNA binding domain JGY87_RS11610 PF00467 KOW motif JGY87_RS11610 PF02357 Transcription termination factor nusG JGY87_RS11615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JGY87_RS11620 PF00471 Ribosomal protein L33 JGY87_RS11635 PF00588 SpoU rRNA Methylase family JGY87_RS11635 PF08032 RNA 2'-O ribose methyltransferase substrate binding JGY87_RS11640 PF00636 Ribonuclease III domain JGY87_RS11645 PF01406 tRNA synthetases class I (C) catalytic domain JGY87_RS11645 PF09190 DALR domain JGY87_RS11650 PF00132 Bacterial transferase hexapeptide (six repeats) JGY87_RS11655 PF00749 tRNA synthetases class I (E and Q), catalytic domain JGY87_RS11665 PF18073 Rubredoxin metal binding domain JGY87_RS11670 PF00004 ATPase family associated with various cellular activities (AAA) JGY87_RS11670 PF07724 AAA domain (Cdc48 subfamily) JGY87_RS11670 PF17871 AAA lid domain JGY87_RS11670 PF02861 Clp amino terminal domain, pathogenicity island component JGY87_RS11670 PF10431 C-terminal, D2-small domain, of ClpB protein JGY87_RS11675 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JGY87_RS11680 PF02151 UvrB/uvrC motif JGY87_RS11685 PF05848 CtsR N-terminal HTH domain JGY87_RS11685 PF17727 CtsR C-terminal dimerization domain JGY87_RS11690 PF07662 Na+ dependent nucleoside transporter C-terminus JGY87_RS11690 PF01773 Na+ dependent nucleoside transporter N-terminus JGY87_RS11695 PF01174 SNO glutamine amidotransferase family JGY87_RS11700 PF01680 SOR/SNZ family JGY87_RS11705 PF00155 Aminotransferase class I and II JGY87_RS11705 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS11790 PF00152 tRNA synthetases class II (D, K and N) JGY87_RS11790 PF01336 OB-fold nucleic acid binding domain JGY87_RS11795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JGY87_RS11800 PF02152 Dihydroneopterin aldolase JGY87_RS11805 PF00809 Pterin binding enzyme JGY87_RS11810 PF00291 Pyridoxal-phosphate dependent enzyme JGY87_RS11815 PF01430 Hsp33 protein JGY87_RS11820 PF00004 ATPase family associated with various cellular activities (AAA) JGY87_RS11820 PF01434 Peptidase family M41 JGY87_RS11820 PF06480 FtsH Extracellular JGY87_RS11820 PF17862 AAA+ lid domain JGY87_RS11825 PF00156 Phosphoribosyl transferase domain JGY87_RS11830 PF01171 PP-loop family JGY87_RS11830 PF11734 TilS substrate C-terminal domain JGY87_RS11835 PF00575 S1 RNA binding domain JGY87_RS11845 PF01479 S4 domain JGY87_RS11850 PF03819 MazG nucleotide pyrophosphohydrolase domain JGY87_RS11850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JGY87_RS11855 PF01943 Polysaccharide biosynthesis protein JGY87_RS11855 PF14667 Polysaccharide biosynthesis C-terminal domain JGY87_RS11860 PF02559 CarD-like/TRCF domain JGY87_RS11860 PF00270 DEAD/DEAH box helicase JGY87_RS11860 PF00271 Helicase conserved C-terminal domain JGY87_RS11860 PF03461 TRCF domain JGY87_RS11860 PF17757 UvrB interaction domain JGY87_RS11865 PF01195 Peptidyl-tRNA hydrolase JGY87_RS11870 PF01386 Ribosomal L25p family JGY87_RS11870 PF14693 Ribosomal protein TL5, C-terminal domain JGY87_RS11875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JGY87_RS11875 PF14572 Phosphoribosyl synthetase-associated domain JGY87_RS11880 PF00132 Bacterial transferase hexapeptide (six repeats) JGY87_RS11880 PF00483 Nucleotidyl transferase JGY87_RS11885 PF04026 SpoVG JGY87_RS11890 PF01042 Endoribonuclease L-PSP JGY87_RS11895 PF00156 Phosphoribosyl transferase domain JGY87_RS11895 PF09182 Bacterial purine repressor, N-terminal JGY87_RS11900 PF08544 GHMP kinases C terminal JGY87_RS11900 PF00288 GHMP kinases N terminal domain JGY87_RS11905 PF06257 Biofilm formation stimulator VEG JGY87_RS11910 PF00398 Ribosomal RNA adenine dimethylase JGY87_RS11915 PF13331 Domain of unknown function (DUF4093) JGY87_RS11915 PF01751 Toprim domain JGY87_RS11920 PF01026 TatD related DNase JGY87_RS11925 PF08264 Anticodon-binding domain of tRNA JGY87_RS11925 PF09334 tRNA synthetases class I (M) JGY87_RS11925 PF01588 Putative tRNA binding domain JGY87_RS11930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JGY87_RS11935 PF01541 GIY-YIG catalytic domain JGY87_RS11940 PF05175 Methyltransferase small domain JGY87_RS11945 PF06156 Initiation control protein YabA JGY87_RS11950 PF04468 PSP1 C-terminal conserved region JGY87_RS11955 PF09115 DNA polymerase III, delta subunit, C terminal JGY87_RS11960 PF06153 Cyclic-di-AMP receptor JGY87_RS11965 PF02223 Thymidylate kinase JGY87_RS11970 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JGY87_RS11970 PF01276 Orn/Lys/Arg decarboxylase, major domain JGY87_RS12005 PF02132 RecR protein JGY87_RS12005 PF13662 Toprim domain JGY87_RS12010 PF02575 YbaB/EbfC DNA-binding family JGY87_RS12015 PF12169 DNA polymerase III subunits gamma and tau domain III JGY87_RS12020 PF00583 Acetyltransferase (GNAT) family JGY87_RS12030 PF00392 Bacterial regulatory proteins, gntR family JGY87_RS12030 PF07702 UTRA domain JGY87_RS12035 PF00128 Alpha amylase, catalytic domain JGY87_RS12035 PF16657 Maltogenic Amylase, C-terminal domain JGY87_RS12040 PF00367 phosphotransferase system, EIIB JGY87_RS12040 PF02378 Phosphotransferase system, EIIC JGY87_RS12050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JGY87_RS12050 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS12055 PF01493 GXGXG motif JGY87_RS12055 PF00310 Glutamine amidotransferases class-II JGY87_RS12055 PF04898 Glutamate synthase central domain JGY87_RS12055 PF01645 Conserved region in glutamate synthase JGY87_RS12075 PF00909 Ammonium Transporter Family JGY87_RS12080 PF00293 NUDIX domain JGY87_RS12090 PF05257 CHAP domain JGY87_RS12090 PF01476 LysM domain JGY87_RS12100 PF00920 Dehydratase family JGY87_RS12110 PF04650 YSIRK type signal peptide JGY87_RS12115 PF00209 Sodium:neurotransmitter symporter family JGY87_RS12120 PF05525 Branched-chain amino acid transport protein JGY87_RS12125 PF08818 Domain of unknown function (DU1801) JGY87_RS12130 PF01145 SPFH domain / Band 7 family JGY87_RS12130 PF15975 Flotillin JGY87_RS12140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JGY87_RS12140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JGY87_RS12155 PF13411 MerR HTH family regulatory protein JGY87_RS12160 PF12146 Serine aminopeptidase, S33 JGY87_RS12170 PF05908 Poly-gamma-glutamate hydrolase JGY87_RS12175 PF00266 Aminotransferase class-V JGY87_RS12180 PF07690 Major Facilitator Superfamily JGY87_RS12185 PF00696 Amino acid kinase family JGY87_RS12195 PF06545 Protein of unknown function (DUF1116) JGY87_RS12200 PF02629 CoA binding domain JGY87_RS12200 PF00549 CoA-ligase JGY87_RS12205 PF02615 Malate/L-lactate dehydrogenase JGY87_RS12210 PF02615 Malate/L-lactate dehydrogenase JGY87_RS12215 PF07883 Cupin domain JGY87_RS12215 PF05899 Protein of unknown function (DUF861) JGY87_RS12220 PF01546 Peptidase family M20/M25/M40 JGY87_RS12230 PF07687 Peptidase dimerisation domain JGY87_RS12230 PF01546 Peptidase family M20/M25/M40 JGY87_RS12235 PF00300 Histidine phosphatase superfamily (branch 1) JGY87_RS12245 PF08281 Sigma-70, region 4 JGY87_RS12245 PF04542 Sigma-70 region 2 JGY87_RS12255 PF08245 Mur ligase middle domain JGY87_RS12255 PF02875 Mur ligase family, glutamate ligase domain JGY87_RS12270 PF02557 D-alanyl-D-alanine carboxypeptidase JGY87_RS12275 PF00199 Catalase JGY87_RS12275 PF06628 Catalase-related immune-responsive JGY87_RS12285 PF01979 Amidohydrolase family JGY87_RS12290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JGY87_RS12295 PF07905 Purine catabolism regulatory protein-like family JGY87_RS12295 PF17853 GGDEF-like domain JGY87_RS12295 PF13556 PucR C-terminal helix-turn-helix domain JGY87_RS12300 PF13673 Acetyltransferase (GNAT) domain JGY87_RS12300 PF04229 GrpB protein JGY87_RS12305 PF07690 Major Facilitator Superfamily JGY87_RS12310 PF00313 'Cold-shock' DNA-binding domain JGY87_RS12325 PF00375 Sodium:dicarboxylate symporter family JGY87_RS12340 PF00117 Glutamine amidotransferase class-I JGY87_RS12340 PF00958 GMP synthase C terminal domain JGY87_RS12345 PF00571 CBS domain JGY87_RS12345 PF00478 IMP dehydrogenase / GMP reductase domain JGY87_RS12350 PF00860 Permease family JGY87_RS12355 PF00156 Phosphoribosyl transferase domain JGY87_RS12360 PF11181 Heat induced stress protein YflT JGY87_RS12375 PF00375 Sodium:dicarboxylate symporter family JGY87_RS12385 PF03313 Serine dehydratase alpha chain JGY87_RS12390 PF01842 ACT domain JGY87_RS12390 PF03315 Serine dehydratase beta chain JGY87_RS12405 PF00881 Nitroreductase family JGY87_RS12410 PF06628 Catalase-related immune-responsive JGY87_RS12410 PF18011 C-terminal domain found in long catalases JGY87_RS12410 PF00199 Catalase JGY87_RS12415 PF10417 C-terminal domain of 1-Cys peroxiredoxin JGY87_RS12415 PF00578 AhpC/TSA family JGY87_RS12420 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS12420 PF13192 Thioredoxin domain JGY87_RS12435 PF00300 Histidine phosphatase superfamily (branch 1) JGY87_RS12455 PF01810 LysE type translocator JGY87_RS12460 PF00893 Small Multidrug Resistance protein JGY87_RS12465 PF00893 Small Multidrug Resistance protein JGY87_RS12485 PF07992 Pyridine nucleotide-disulphide oxidoreductase JGY87_RS12485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JGY87_RS12500 PF05908 Poly-gamma-glutamate hydrolase JGY87_RS12505 PF02386 Cation transport protein JGY87_RS12510 PF01970 Tripartite tricarboxylate transporter TctA family JGY87_RS12525 PF04303 PrpF protein JGY87_RS12530 PF03466 LysR substrate binding domain JGY87_RS12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS12540 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JGY87_RS12540 PF01510 N-acetylmuramoyl-L-alanine amidase JGY87_RS12540 PF13457 GW (Gly-Tryp) dipeptide domain JGY87_RS12560 PF00753 Metallo-beta-lactamase superfamily JGY87_RS12565 PF13686 DsrE/DsrF/DrsH-like family JGY87_RS12570 PF02583 Metal-sensitive transcriptional repressor JGY87_RS12575 PF01925 Sulfite exporter TauE/SafE JGY87_RS12585 PF01084 Ribosomal protein S18 JGY87_RS12595 PF01648 4'-phosphopantetheinyl transferase superfamily JGY87_RS12605 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS12605 PF00668 Condensation domain JGY87_RS12605 PF00550 Phosphopantetheine attachment site JGY87_RS12605 PF00975 Thioesterase domain JGY87_RS12605 PF00501 AMP-binding enzyme JGY87_RS12610 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS12610 PF00668 Condensation domain JGY87_RS12610 PF00550 Phosphopantetheine attachment site JGY87_RS12610 PF00975 Thioesterase domain JGY87_RS12610 PF00501 AMP-binding enzyme JGY87_RS12620 PF00436 Single-strand binding protein family JGY87_RS12625 PF01250 Ribosomal protein S6 JGY87_RS12635 PF01926 50S ribosome-binding GTPase JGY87_RS12635 PF06071 Protein of unknown function (DUF933) JGY87_RS12640 PF06107 Bacterial protein of unknown function (DUF951) JGY87_RS12645 PF00924 Mechanosensitive ion channel JGY87_RS12650 PF10057 Uncharacterized conserved protein (DUF2294) JGY87_RS12655 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JGY87_RS12660 PF00361 Proton-conducting membrane transporter JGY87_RS12660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JGY87_RS12665 PF12833 Helix-turn-helix domain JGY87_RS12665 PF02311 AraC-like ligand binding domain JGY87_RS12670 PF02056 Family 4 glycosyl hydrolase JGY87_RS12670 PF11975 Family 4 glycosyl hydrolase C-terminal domain JGY87_RS12680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JGY87_RS12680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JGY87_RS12685 PF00107 Zinc-binding dehydrogenase JGY87_RS12685 PF08240 Alcohol dehydrogenase GroES-like domain JGY87_RS12690 PF01964 Radical SAM ThiC family JGY87_RS12690 PF13667 ThiC-associated domain JGY87_RS12695 PF00465 Iron-containing alcohol dehydrogenase JGY87_RS12720 PF02687 FtsX-like permease family JGY87_RS12720 PF12704 MacB-like periplasmic core domain JGY87_RS12725 PF00005 ABC transporter JGY87_RS12730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JGY87_RS12735 PF03606 C4-dicarboxylate anaerobic carrier JGY87_RS12740 PF06968 Biotin and Thiamin Synthesis associated domain JGY87_RS12740 PF04055 Radical SAM superfamily JGY87_RS12745 PF06445 GyrI-like small molecule binding domain JGY87_RS12745 PF13411 MerR HTH family regulatory protein JGY87_RS12750 PF07690 Major Facilitator Superfamily JGY87_RS12765 PF00171 Aldehyde dehydrogenase family JGY87_RS12775 PF00501 AMP-binding enzyme JGY87_RS12775 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS12780 PF07690 Major Facilitator Superfamily JGY87_RS12785 PF01546 Peptidase family M20/M25/M40 JGY87_RS12785 PF07687 Peptidase dimerisation domain JGY87_RS12790 PF07690 Major Facilitator Superfamily JGY87_RS12795 PF01638 HxlR-like helix-turn-helix JGY87_RS12800 PF01575 MaoC like domain JGY87_RS12805 PF06993 Protein of unknown function (DUF1304) JGY87_RS12810 PF00083 Sugar (and other) transporter JGY87_RS12825 PF01098 Cell cycle protein JGY87_RS12830 PF13649 Methyltransferase domain JGY87_RS12835 PF00962 Adenosine/AMP deaminase JGY87_RS12850 PF14306 PUA-like domain JGY87_RS12850 PF01747 ATP-sulfurylase JGY87_RS12855 PF01925 Sulfite exporter TauE/SafE JGY87_RS12860 PF14824 Sirohaem biosynthesis protein central JGY87_RS12865 PF01903 CbiX JGY87_RS12870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JGY87_RS12875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JGY87_RS12875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JGY87_RS12880 PF00258 Flavodoxin JGY87_RS12880 PF00175 Oxidoreductase NAD-binding domain JGY87_RS12880 PF00667 FAD binding domain JGY87_RS12885 PF01507 Phosphoadenosine phosphosulfate reductase family JGY87_RS12890 PF17762 HTH domain found in ParB protein JGY87_RS12890 PF02195 ParB-like nuclease domain JGY87_RS12895 PF01053 Cys/Met metabolism PLP-dependent enzyme JGY87_RS12900 PF01053 Cys/Met metabolism PLP-dependent enzyme JGY87_RS12905 PF02574 Homocysteine S-methyltransferase JGY87_RS12905 PF02219 Methylenetetrahydrofolate reductase JGY87_RS12910 PF08267 Cobalamin-independent synthase, N-terminal domain JGY87_RS12910 PF01717 Cobalamin-independent synthase, Catalytic domain JGY87_RS12920 PF00175 Oxidoreductase NAD-binding domain JGY87_RS12920 PF00258 Flavodoxin JGY87_RS12920 PF00667 FAD binding domain JGY87_RS12945 PF02803 Thiolase, C-terminal domain JGY87_RS12945 PF00108 Thiolase, N-terminal domain JGY87_RS12950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JGY87_RS12950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JGY87_RS12955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JGY87_RS12955 PF02770 Acyl-CoA dehydrogenase, middle domain JGY87_RS12955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JGY87_RS12960 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS12960 PF00501 AMP-binding enzyme JGY87_RS12965 PF01144 Coenzyme A transferase JGY87_RS12970 PF03448 MgtE intracellular N domain JGY87_RS12970 PF01769 Divalent cation transporter JGY87_RS12970 PF00571 CBS domain JGY87_RS12975 PF01297 Zinc-uptake complex component A periplasmic JGY87_RS12980 PF00950 ABC 3 transport family JGY87_RS12985 PF00005 ABC transporter JGY87_RS13005 PF03466 LysR substrate binding domain JGY87_RS13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JGY87_RS13010 PF03061 Thioesterase superfamily JGY87_RS13020 PF01757 Acyltransferase family JGY87_RS13025 PF00535 Glycosyl transferase family 2 JGY87_RS13030 PF00535 Glycosyl transferase family 2 JGY87_RS13030 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS13035 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JGY87_RS13035 PF00535 Glycosyl transferase family 2 JGY87_RS13050 PF00550 Phosphopantetheine attachment site JGY87_RS13050 PF00668 Condensation domain JGY87_RS13050 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS13050 PF00501 AMP-binding enzyme JGY87_RS13050 PF00975 Thioesterase domain JGY87_RS13065 PF13520 Amino acid permease JGY87_RS13070 PF00248 Aldo/keto reductase family JGY87_RS13075 PF01497 Periplasmic binding protein JGY87_RS13090 PF07664 Ferrous iron transport protein B C terminus JGY87_RS13090 PF17910 FeoB cytosolic helical domain JGY87_RS13090 PF02421 Ferrous iron transport protein B JGY87_RS13090 PF07670 Nucleoside recognition JGY87_RS13100 PF13411 MerR HTH family regulatory protein JGY87_RS13100 PF07739 TipAS antibiotic-recognition domain JGY87_RS13110 PF10417 C-terminal domain of 1-Cys peroxiredoxin JGY87_RS13110 PF00578 AhpC/TSA family JGY87_RS13115 PF00474 Sodium:solute symporter family JGY87_RS13120 PF01381 Helix-turn-helix JGY87_RS13125 PF07690 Major Facilitator Superfamily JGY87_RS13130 PF02554 Carbon starvation protein CstA JGY87_RS13135 PF02195 ParB-like nuclease domain JGY87_RS13135 PF17762 HTH domain found in ParB protein JGY87_RS13140 PF02527 rRNA small subunit methyltransferase G JGY87_RS13145 PF01134 Glucose inhibited division protein A JGY87_RS13145 PF13932 GidA associated domain JGY87_RS13150 PF01926 50S ribosome-binding GTPase JGY87_RS13150 PF12631 MnmE helical domain JGY87_RS13150 PF10396 GTP-binding protein TrmE N-terminus JGY87_RS13155 PF00825 Ribonuclease P JGY87_RS13160 PF00468 Ribosomal protein L34 JGY87_RS13165 PF01446 Replication protein JGY87_RS13180 PF07501 G5 domain JGY87_RS13180 PF00746 LPXTG cell wall anchor motif JGY87_RS13180 PF17041 E domain JGY87_RS13180 PF04650 YSIRK type signal peptide JGY87_RS13215 PF00975 Thioesterase domain JGY87_RS13215 PF00550 Phosphopantetheine attachment site JGY87_RS13215 PF00501 AMP-binding enzyme JGY87_RS13215 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS13215 PF00668 Condensation domain JGY87_RS13225 PF00202 Aminotransferase class-III JGY87_RS13225 PF00501 AMP-binding enzyme JGY87_RS13225 PF13193 AMP-binding enzyme C-terminal domain JGY87_RS13225 PF00668 Condensation domain JGY87_RS13225 PF16197 Ketoacyl-synthetase C-terminal extension JGY87_RS13225 PF00109 Beta-ketoacyl synthase, N-terminal domain JGY87_RS13225 PF02801 Beta-ketoacyl synthase, C-terminal domain JGY87_RS13225 PF00550 Phosphopantetheine attachment site