locus-tag class description SHELL_RS00030 PF06463 Molybdenum Cofactor Synthesis C SHELL_RS00030 PF04055 Radical SAM superfamily SHELL_RS00040 PF01507 Phosphoadenosine phosphosulfate reductase family SHELL_RS00055 PF01926 50S ribosome-binding GTPase SHELL_RS00060 PF00899 ThiF family SHELL_RS00075 PF00924 Mechanosensitive ion channel SHELL_RS00085 PF01380 SIS domain SHELL_RS00090 PF00696 Amino acid kinase family SHELL_RS00105 PF00398 Ribosomal RNA adenine dimethylase SHELL_RS00135 PF00448 SRP54-type protein, GTPase domain SHELL_RS00135 PF02881 SRP54-type protein, helical bundle domain SHELL_RS00135 PF02978 Signal peptide binding domain SHELL_RS00160 PF00206 Lyase SHELL_RS00160 PF10397 Adenylosuccinate lyase C-terminus SHELL_RS00170 PF00709 Adenylosuccinate synthetase SHELL_RS00175 PF00156 Phosphoribosyl transferase domain SHELL_RS00180 PF00117 Glutamine amidotransferase class-I SHELL_RS00180 PF02540 NAD synthase SHELL_RS00180 PF00958 GMP synthase C terminal domain SHELL_RS00200 PF01906 Putative heavy-metal-binding SHELL_RS00215 PF00156 Phosphoribosyl transferase domain SHELL_RS00220 PF01048 Phosphorylase superfamily SHELL_RS00235 PF08443 RimK-like ATP-grasp domain SHELL_RS00265 PF14791 DNA polymerase beta thumb SHELL_RS00265 PF14716 Helix-hairpin-helix domain SHELL_RS00265 PF02811 PHP domain SHELL_RS00270 PF00133 tRNA synthetases class I (I, L, M and V) SHELL_RS00270 PF08264 Anticodon-binding domain of tRNA SHELL_RS00275 PF05161 MOFRL family SHELL_RS00275 PF13660 Domain of unknown function (DUF4147) SHELL_RS00290 PF02545 Maf-like protein SHELL_RS00295 PF09383 NIL domain SHELL_RS00295 PF00005 ABC transporter SHELL_RS00330 PF08241 Methyltransferase domain SHELL_RS00335 PF01029 NusB family SHELL_RS00335 PF01189 16S rRNA methyltransferase RsmB/F SHELL_RS00345 PF01513 ATP-NAD kinase SHELL_RS00365 PF01367 5'-3' exonuclease, C-terminal SAM fold SHELL_RS00365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SHELL_RS00365 PF00476 DNA polymerase family A SHELL_RS00365 PF09281 Taq polymerase, exonuclease SHELL_RS00375 PF17862 AAA+ lid domain SHELL_RS00375 PF00004 ATPase family associated with various cellular activities (AAA) SHELL_RS00375 PF01434 Peptidase family M41 SHELL_RS00390 PF01142 tRNA pseudouridine synthase D (TruD) SHELL_RS00415 PF00005 ABC transporter SHELL_RS00430 PF02585 GlcNAc-PI de-N-acetylase SHELL_RS00435 PF00754 F5/8 type C domain SHELL_RS00435 PF00041 Fibronectin type III domain SHELL_RS00435 PF00963 Cohesin domain SHELL_RS00435 PF02838 Glycosyl hydrolase family 20, domain 2 SHELL_RS00435 PF07555 beta-N-acetylglucosaminidase SHELL_RS00445 PF02056 Family 4 glycosyl hydrolase SHELL_RS00445 PF11975 Family 4 glycosyl hydrolase C-terminal domain SHELL_RS00455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SHELL_RS00460 PF10609 NUBPL iron-transfer P-loop NTPase SHELL_RS00495 PF01048 Phosphorylase superfamily SHELL_RS00500 PF00107 Zinc-binding dehydrogenase SHELL_RS00500 PF08240 Alcohol dehydrogenase GroES-like domain SHELL_RS00550 PF01555 DNA methylase SHELL_RS00585 PF13427 Domain of unknown function (DUF4111) SHELL_RS00585 PF01909 Nucleotidyltransferase domain SHELL_RS00620 PF01384 Phosphate transporter family SHELL_RS00630 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SHELL_RS00630 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SHELL_RS00645 PF04055 Radical SAM superfamily SHELL_RS00645 PF02310 B12 binding domain SHELL_RS00650 PF13186 Iron-sulfur cluster-binding domain SHELL_RS00650 PF04055 Radical SAM superfamily SHELL_RS00670 PF00999 Sodium/hydrogen exchanger family SHELL_RS00675 PF03600 Citrate transporter SHELL_RS00680 PF00146 NADH dehydrogenase SHELL_RS00690 PF01899 Na+/H+ ion antiporter subunit SHELL_RS00715 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SHELL_RS00725 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SHELL_RS00730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SHELL_RS00735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SHELL_RS00740 PF00361 Proton-conducting membrane transporter SHELL_RS00750 PF01138 3' exoribonuclease family, domain 1 SHELL_RS00750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SHELL_RS00750 PF00013 KH domain SHELL_RS00750 PF03725 3' exoribonuclease family, domain 2 SHELL_RS00750 PF00575 S1 RNA binding domain SHELL_RS00795 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SHELL_RS00795 PF00013 KH domain SHELL_RS00795 PF01138 3' exoribonuclease family, domain 1 SHELL_RS00795 PF00575 S1 RNA binding domain SHELL_RS00795 PF03725 3' exoribonuclease family, domain 2 SHELL_RS00815 PF00252 Ribosomal protein L16p/L10e SHELL_RS00820 PF02926 THUMP domain SHELL_RS00820 PF10672 S-adenosylmethionine-dependent methyltransferase SHELL_RS00820 PF01170 Putative RNA methylase family UPF0020 SHELL_RS00860 PF02223 Thymidylate kinase SHELL_RS00880 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SHELL_RS01000 PF07728 AAA domain (dynein-related subfamily) SHELL_RS01000 PF12102 Domain of unknown function (DUF3578) SHELL_RS01070 PF01555 DNA methylase SHELL_RS01085 PF01180 Dihydroorotate dehydrogenase SHELL_RS01090 PF01979 Amidohydrolase family SHELL_RS01095 PF00175 Oxidoreductase NAD-binding domain SHELL_RS01095 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SHELL_RS01100 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain SHELL_RS01100 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain SHELL_RS01105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHELL_RS01105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHELL_RS01110 PF00156 Phosphoribosyl transferase domain SHELL_RS01110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SHELL_RS01120 PF06418 CTP synthase N-terminus SHELL_RS01120 PF00117 Glutamine amidotransferase class-I SHELL_RS01125 PF00156 Phosphoribosyl transferase domain SHELL_RS01155 PF00571 CBS domain SHELL_RS01155 PF01769 Divalent cation transporter SHELL_RS01155 PF03448 MgtE intracellular N domain SHELL_RS01190 PF00128 Alpha amylase, catalytic domain SHELL_RS01190 PF16657 Maltogenic Amylase, C-terminal domain SHELL_RS01190 PF02903 Alpha amylase, N-terminal ig-like domain SHELL_RS01210 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family SHELL_RS01235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SHELL_RS01235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SHELL_RS01240 PF00266 Aminotransferase class-V SHELL_RS01260 PF01321 Creatinase/Prolidase N-terminal domain SHELL_RS01260 PF00557 Metallopeptidase family M24 SHELL_RS01265 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SHELL_RS01280 PF00498 FHA domain SHELL_RS01280 PF12401 Protein of unknown function (DUF2662) SHELL_RS01285 PF00069 Protein kinase domain SHELL_RS01285 PF01011 PQQ enzyme repeat SHELL_RS01285 PF13360 PQQ-like domain SHELL_RS01285 PF13570 PQQ-like domain SHELL_RS01290 PF01895 PhoU domain SHELL_RS01310 PF01300 Telomere recombination SHELL_RS01335 PF03537 Glycoside-hydrolase family GH114 SHELL_RS01375 PF04055 Radical SAM superfamily SHELL_RS01375 PF00919 Uncharacterized protein family UPF0004 SHELL_RS01380 PF02594 Uncharacterised ACR, YggU family COG1872 SHELL_RS01390 PF13291 ACT domain SHELL_RS01390 PF00291 Pyridoxal-phosphate dependent enzyme SHELL_RS01425 PF01048 Phosphorylase superfamily SHELL_RS01430 PF09190 DALR domain SHELL_RS01430 PF01406 tRNA synthetases class I (C) catalytic domain SHELL_RS01460 PF00696 Amino acid kinase family SHELL_RS01480 PF01032 FecCD transport family SHELL_RS01485 PF00005 ABC transporter SHELL_RS01495 PF00857 Isochorismatase family SHELL_RS01495 PF00550 Phosphopantetheine attachment site SHELL_RS01500 PF01926 50S ribosome-binding GTPase SHELL_RS01500 PF04055 Radical SAM superfamily SHELL_RS01500 PF01018 GTP1/OBG SHELL_RS01530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SHELL_RS01530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SHELL_RS01540 PF02001 Protein of unknown function DUF134 SHELL_RS01545 PF00348 Polyprenyl synthetase SHELL_RS01555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SHELL_RS01560 PF00579 tRNA synthetases class I (W and Y) SHELL_RS01565 PF01979 Amidohydrolase family SHELL_RS01570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SHELL_RS01580 PF00885 6,7-dimethyl-8-ribityllumazine synthase SHELL_RS01645 PF04675 DNA ligase N terminus SHELL_RS01645 PF01068 ATP dependent DNA ligase domain SHELL_RS01645 PF04679 ATP dependent DNA ligase C terminal region SHELL_RS01655 PF00719 Inorganic pyrophosphatase SHELL_RS01665 PF00549 CoA-ligase SHELL_RS01665 PF02629 CoA binding domain SHELL_RS01670 PF08442 ATP-grasp domain SHELL_RS01670 PF00549 CoA-ligase SHELL_RS01690 PF00294 pfkB family carbohydrate kinase SHELL_RS01695 PF01048 Phosphorylase superfamily SHELL_RS01705 PF12850 Calcineurin-like phosphoesterase superfamily domain SHELL_RS01715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SHELL_RS01715 PF01872 RibD C-terminal domain SHELL_RS01730 PF13419 Haloacid dehalogenase-like hydrolase SHELL_RS01740 PF02391 MoaE protein SHELL_RS01775 PF09334 tRNA synthetases class I (M) SHELL_RS01775 PF08264 Anticodon-binding domain of tRNA SHELL_RS01775 PF01588 Putative tRNA binding domain SHELL_RS01780 PF02926 THUMP domain SHELL_RS01780 PF02568 Thiamine biosynthesis protein (ThiI) SHELL_RS01815 PF17863 AAA lid domain SHELL_RS01815 PF07726 ATPase family associated with various cellular activities (AAA) SHELL_RS01850 PF00082 Subtilase family SHELL_RS01855 PF03853 YjeF-related protein N-terminus SHELL_RS01855 PF01256 Carbohydrate kinase SHELL_RS01900 PF01189 16S rRNA methyltransferase RsmB/F SHELL_RS01900 PF01029 NusB family SHELL_RS01910 PF01661 Macro domain SHELL_RS01930 PF02310 B12 binding domain SHELL_RS01930 PF02607 B12 binding domain SHELL_RS01940 PF02007 Tetrahydromethanopterin S-methyltransferase MtrH subunit SHELL_RS01945 PF01554 MatE SHELL_RS01950 PF00326 Prolyl oligopeptidase family SHELL_RS01950 PF07676 WD40-like Beta Propeller Repeat SHELL_RS01970 PF01925 Sulfite exporter TauE/SafE SHELL_RS01990 PF01980 tRNA-methyltransferase O SHELL_RS01995 PF00005 ABC transporter SHELL_RS02010 PF01037 Lrp/AsnC ligand binding domain SHELL_RS02020 PF05191 Adenylate kinase, active site lid SHELL_RS02025 PF01507 Phosphoadenosine phosphosulfate reductase family SHELL_RS02030 PF01171 PP-loop family SHELL_RS02045 PF02073 Thermophilic metalloprotease (M29) SHELL_RS02055 PF00005 ABC transporter SHELL_RS02080 PF01380 SIS domain SHELL_RS02095 PF01979 Amidohydrolase family SHELL_RS02095 PF13382 Adenine deaminase C-terminal domain SHELL_RS02100 PF01979 Amidohydrolase family SHELL_RS02110 PF00266 Aminotransferase class-V SHELL_RS02120 PF01522 Polysaccharide deacetylase SHELL_RS02125 PF01189 16S rRNA methyltransferase RsmB/F SHELL_RS02125 PF01029 NusB family SHELL_RS02195 PF00005 ABC transporter SHELL_RS02235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SHELL_RS02235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SHELL_RS02240 PF00111 2Fe-2S iron-sulfur cluster binding domain SHELL_RS02240 PF01799 [2Fe-2S] binding domain SHELL_RS02250 PF00291 Pyridoxal-phosphate dependent enzyme SHELL_RS02260 PF00005 ABC transporter SHELL_RS02295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SHELL_RS02300 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS02305 PF12911 N-terminal TM domain of oligopeptide transport permease C SHELL_RS02310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS02310 PF00005 ABC transporter SHELL_RS02315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS02315 PF00005 ABC transporter SHELL_RS02320 PF02436 Conserved carboxylase domain SHELL_RS02320 PF00682 HMGL-like SHELL_RS02320 PF00364 Biotin-requiring enzyme SHELL_RS02340 PF01747 ATP-sulfurylase SHELL_RS02340 PF14306 PUA-like domain SHELL_RS02350 PF00939 Sodium:sulfate symporter transmembrane region SHELL_RS02360 PF01336 OB-fold nucleic acid binding domain SHELL_RS02360 PF00152 tRNA synthetases class II (D, K and N) SHELL_RS02370 PF01791 DeoC/LacD family aldolase SHELL_RS02415 PF00069 Protein kinase domain SHELL_RS02415 PF03793 PASTA domain SHELL_RS02455 PF03793 PASTA domain SHELL_RS02455 PF00069 Protein kinase domain SHELL_RS02480 PF00069 Protein kinase domain SHELL_RS02480 PF03793 PASTA domain SHELL_RS02520 PF18211 Csm1 subunit domain B SHELL_RS02520 PF01966 HD domain SHELL_RS02535 PF03787 RAMP superfamily SHELL_RS02555 PF00994 Probable molybdopterin binding domain SHELL_RS02560 PF00005 ABC transporter SHELL_RS02560 PF17912 MalK OB fold domain SHELL_RS02560 PF03459 TOBE domain SHELL_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS02590 PF00152 tRNA synthetases class II (D, K and N) SHELL_RS02590 PF01336 OB-fold nucleic acid binding domain SHELL_RS02620 PF01370 NAD dependent epimerase/dehydratase family SHELL_RS02645 PF01914 MarC family integral membrane protein SHELL_RS02655 PF03459 TOBE domain SHELL_RS02655 PF17912 MalK OB fold domain SHELL_RS02655 PF00005 ABC transporter SHELL_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS02675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHELL_RS02675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHELL_RS02685 PF00155 Aminotransferase class I and II SHELL_RS02730 PF00005 ABC transporter SHELL_RS02730 PF08402 TOBE domain SHELL_RS02735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SHELL_RS02735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SHELL_RS02750 PF03009 Glycerophosphoryl diester phosphodiesterase family SHELL_RS02760 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS02760 PF13192 Thioredoxin domain SHELL_RS02765 PF01266 FAD dependent oxidoreductase SHELL_RS02770 PF01409 tRNA synthetases class II core domain (F) SHELL_RS02775 PF08745 PINc domain ribonuclease SHELL_RS02780 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SHELL_RS02780 PF01189 16S rRNA methyltransferase RsmB/F SHELL_RS02780 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SHELL_RS02800 PF00999 Sodium/hydrogen exchanger family SHELL_RS02805 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SHELL_RS02805 PF03484 tRNA synthetase B5 domain SHELL_RS02815 PF01458 Uncharacterized protein family (UPF0051) SHELL_RS02830 PF00857 Isochorismatase family SHELL_RS02835 PF11897 Protein of unknown function (DUF3417) SHELL_RS02835 PF00343 Carbohydrate phosphorylase SHELL_RS02850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SHELL_RS02850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SHELL_RS02855 PF00582 Universal stress protein family SHELL_RS02860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SHELL_RS02860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SHELL_RS02865 PF00162 Phosphoglycerate kinase SHELL_RS02870 PF01180 Dihydroorotate dehydrogenase SHELL_RS02885 PF01979 Amidohydrolase family SHELL_RS02890 PF00696 Amino acid kinase family SHELL_RS02920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHELL_RS02920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHELL_RS02935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHELL_RS02935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHELL_RS02955 PF10609 NUBPL iron-transfer P-loop NTPase SHELL_RS02965 PF08544 GHMP kinases C terminal SHELL_RS02965 PF00288 GHMP kinases N terminal domain SHELL_RS02990 PF00795 Carbon-nitrogen hydrolase SHELL_RS03010 PF03453 MoeA N-terminal region (domain I and II) SHELL_RS03010 PF00994 Probable molybdopterin binding domain SHELL_RS03010 PF03454 MoeA C-terminal region (domain IV) SHELL_RS03015 PF00270 DEAD/DEAH box helicase SHELL_RS03015 PF08148 DSHCT (NUC185) domain SHELL_RS03015 PF00271 Helicase conserved C-terminal domain SHELL_RS03045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SHELL_RS03045 PF17944 Arginine decarboxylase C-terminal helical extension SHELL_RS03045 PF17810 Arginine decarboxylase helical bundle domain SHELL_RS03060 PF00483 Nucleotidyl transferase SHELL_RS03065 PF01161 Phosphatidylethanolamine-binding protein SHELL_RS03090 PF00005 ABC transporter SHELL_RS03130 PF03099 Biotin/lipoate A/B protein ligase family SHELL_RS03140 PF04055 Radical SAM superfamily SHELL_RS03140 PF06968 Biotin and Thiamin Synthesis associated domain SHELL_RS03150 PF00005 ABC transporter SHELL_RS03160 PF00291 Pyridoxal-phosphate dependent enzyme SHELL_RS03165 PF01037 Lrp/AsnC ligand binding domain SHELL_RS03170 PF00120 Glutamine synthetase, catalytic domain SHELL_RS03170 PF03951 Glutamine synthetase, beta-Grasp domain SHELL_RS03175 PF12826 Helix-hairpin-helix motif SHELL_RS03175 PF03120 NAD-dependent DNA ligase OB-fold domain SHELL_RS03175 PF01653 NAD-dependent DNA ligase adenylation domain SHELL_RS03175 PF00533 BRCA1 C Terminus (BRCT) domain SHELL_RS03180 PF00953 Glycosyl transferase family 4 SHELL_RS03180 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SHELL_RS03185 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SHELL_RS03205 PF12804 MobA-like NTP transferase domain SHELL_RS03205 PF00132 Bacterial transferase hexapeptide (six repeats) SHELL_RS03210 PF00005 ABC transporter SHELL_RS03225 PF02789 Cytosol aminopeptidase family, N-terminal domain SHELL_RS03225 PF00883 Cytosol aminopeptidase family, catalytic domain SHELL_RS03230 PF01865 Protein of unknown function DUF47 SHELL_RS03275 PF01145 SPFH domain / Band 7 family SHELL_RS03285 PF08402 TOBE domain SHELL_RS03285 PF00005 ABC transporter SHELL_RS03290 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS03335 PF02896 PEP-utilising enzyme, TIM barrel domain SHELL_RS03335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SHELL_RS03335 PF00391 PEP-utilising enzyme, mobile domain SHELL_RS03340 PF00289 Biotin carboxylase, N-terminal domain SHELL_RS03340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SHELL_RS03340 PF02785 Biotin carboxylase C-terminal domain SHELL_RS03350 PF07687 Peptidase dimerisation domain SHELL_RS03350 PF01546 Peptidase family M20/M25/M40 SHELL_RS03370 PF02653 Branched-chain amino acid transport system / permease component SHELL_RS03375 PF02653 Branched-chain amino acid transport system / permease component SHELL_RS03380 PF00005 ABC transporter SHELL_RS03385 PF02608 ABC transporter substrate-binding protein PnrA-like SHELL_RS03415 PF01979 Amidohydrolase family SHELL_RS03440 PF00483 Nucleotidyl transferase SHELL_RS03445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SHELL_RS03445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SHELL_RS03445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SHELL_RS03445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SHELL_RS03450 PF02627 Carboxymuconolactone decarboxylase family SHELL_RS03455 PF13603 Leucyl-tRNA synthetase, Domain 2 SHELL_RS03455 PF09334 tRNA synthetases class I (M) SHELL_RS03455 PF00133 tRNA synthetases class I (I, L, M and V) SHELL_RS03455 PF08264 Anticodon-binding domain of tRNA SHELL_RS03460 PF00005 ABC transporter SHELL_RS03465 PF01458 Uncharacterized protein family (UPF0051) SHELL_RS03470 PF01458 Uncharacterized protein family (UPF0051) SHELL_RS03475 PF00005 ABC transporter SHELL_RS03485 PF00535 Glycosyl transferase family 2 SHELL_RS03490 PF03459 TOBE domain SHELL_RS03490 PF00005 ABC transporter SHELL_RS03490 PF17912 MalK OB fold domain SHELL_RS03495 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS03525 PF13230 Glutamine amidotransferases class-II SHELL_RS03535 PF00155 Aminotransferase class I and II SHELL_RS03545 PF00291 Pyridoxal-phosphate dependent enzyme SHELL_RS03570 PF12838 4Fe-4S dicluster domain SHELL_RS03570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SHELL_RS03570 PF00384 Molybdopterin oxidoreductase SHELL_RS03570 PF01568 Molydopterin dinucleotide binding domain SHELL_RS03570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SHELL_RS03580 PF00171 Aldehyde dehydrogenase family SHELL_RS03585 PF00534 Glycosyl transferases group 1 SHELL_RS03595 PF00005 ABC transporter SHELL_RS03595 PF08402 TOBE domain SHELL_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS03610 PF01547 Bacterial extracellular solute-binding protein SHELL_RS03615 PF01113 Dihydrodipicolinate reductase, N-terminus SHELL_RS03620 PF00291 Pyridoxal-phosphate dependent enzyme SHELL_RS03630 PF00999 Sodium/hydrogen exchanger family SHELL_RS03670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SHELL_RS03680 PF08264 Anticodon-binding domain of tRNA SHELL_RS03680 PF00133 tRNA synthetases class I (I, L, M and V) SHELL_RS03685 PF00005 ABC transporter SHELL_RS03705 PF01966 HD domain SHELL_RS03710 PF00924 Mechanosensitive ion channel SHELL_RS03710 PF05552 Conserved TM helix SHELL_RS03730 PF00578 AhpC/TSA family SHELL_RS03730 PF10417 C-terminal domain of 1-Cys peroxiredoxin SHELL_RS03735 PF05343 M42 glutamyl aminopeptidase SHELL_RS03740 PF00258 Flavodoxin SHELL_RS03740 PF00753 Metallo-beta-lactamase superfamily SHELL_RS03750 PF03070 TENA/THI-4/PQQC family SHELL_RS03770 PF00005 ABC transporter SHELL_RS03775 PF08543 Phosphomethylpyrimidine kinase SHELL_RS03780 PF01037 Lrp/AsnC ligand binding domain SHELL_RS03790 PF01880 Desulfoferrodoxin SHELL_RS03795 PF00465 Iron-containing alcohol dehydrogenase SHELL_RS03800 PF00004 ATPase family associated with various cellular activities (AAA) SHELL_RS03800 PF02190 ATP-dependent protease La (LON) substrate-binding domain SHELL_RS03800 PF05362 Lon protease (S16) C-terminal proteolytic domain SHELL_RS03815 PF00005 ABC transporter SHELL_RS03850 PF02625 XdhC and CoxI family SHELL_RS03850 PF13478 XdhC Rossmann domain SHELL_RS03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHELL_RS03885 PF11953 Domain of unknown function (DUF3470) SHELL_RS03885 PF12838 4Fe-4S dicluster domain SHELL_RS03890 PF04324 BFD-like [2Fe-2S] binding domain SHELL_RS03890 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS03895 PF01266 FAD dependent oxidoreductase SHELL_RS03900 PF00294 pfkB family carbohydrate kinase SHELL_RS03910 PF01171 PP-loop family SHELL_RS03920 PF00150 Cellulase (glycosyl hydrolase family 5) SHELL_RS03920 PF00553 Cellulose binding domain SHELL_RS03925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS03925 PF00005 ABC transporter SHELL_RS03930 PF00005 ABC transporter SHELL_RS03930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS03935 PF12911 N-terminal TM domain of oligopeptide transport permease C SHELL_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS03945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SHELL_RS03950 PF00232 Glycosyl hydrolase family 1 SHELL_RS03955 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SHELL_RS03960 PF01544 CorA-like Mg2+ transporter protein SHELL_RS03965 PF01791 DeoC/LacD family aldolase SHELL_RS03985 PF00994 Probable molybdopterin binding domain SHELL_RS03985 PF03453 MoeA N-terminal region (domain I and II) SHELL_RS03985 PF03454 MoeA C-terminal region (domain IV) SHELL_RS03995 PF00202 Aminotransferase class-III SHELL_RS04005 PF03485 Arginyl tRNA synthetase N terminal domain SHELL_RS04005 PF00750 tRNA synthetases class I (R) SHELL_RS04005 PF05746 DALR anticodon binding domain SHELL_RS04010 PF01967 MoaC family SHELL_RS04015 PF04055 Radical SAM superfamily SHELL_RS04015 PF06463 Molybdenum Cofactor Synthesis C SHELL_RS04035 PF17910 FeoB cytosolic helical domain SHELL_RS04035 PF02421 Ferrous iron transport protein B SHELL_RS04035 PF07670 Nucleoside recognition SHELL_RS04035 PF07664 Ferrous iron transport protein B C terminus SHELL_RS04075 PF00994 Probable molybdopterin binding domain SHELL_RS04075 PF03453 MoeA N-terminal region (domain I and II) SHELL_RS04075 PF03454 MoeA C-terminal region (domain IV) SHELL_RS04085 PF00583 Acetyltransferase (GNAT) family SHELL_RS04085 PF16199 Radical_SAM C-terminal domain SHELL_RS04085 PF04055 Radical SAM superfamily SHELL_RS04115 PF16363 GDP-mannose 4,6 dehydratase SHELL_RS04130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SHELL_RS04130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SHELL_RS04130 PF04324 BFD-like [2Fe-2S] binding domain SHELL_RS04130 PF18267 Rubredoxin NAD+ reductase C-terminal domain SHELL_RS04130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS04135 PF13247 4Fe-4S dicluster domain SHELL_RS04135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SHELL_RS04140 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SHELL_RS04140 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SHELL_RS04150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SHELL_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS04160 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS04160 PF12911 N-terminal TM domain of oligopeptide transport permease C SHELL_RS04165 PF00005 ABC transporter SHELL_RS04165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS04170 PF00005 ABC transporter SHELL_RS04170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS04205 PF00005 ABC transporter SHELL_RS04245 PF17863 AAA lid domain SHELL_RS04245 PF07726 ATPase family associated with various cellular activities (AAA) SHELL_RS04270 PF00535 Glycosyl transferase family 2 SHELL_RS04285 PF08241 Methyltransferase domain SHELL_RS04300 PF16363 GDP-mannose 4,6 dehydratase SHELL_RS04320 PF00534 Glycosyl transferases group 1 SHELL_RS04320 PF13439 Glycosyltransferase Family 4 SHELL_RS04325 PF05050 Methyltransferase FkbM domain SHELL_RS04365 PF01522 Polysaccharide deacetylase SHELL_RS04370 PF13439 Glycosyltransferase Family 4 SHELL_RS04375 PF00535 Glycosyl transferase family 2 SHELL_RS04385 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SHELL_RS04390 PF04321 RmlD substrate binding domain SHELL_RS04395 PF16363 GDP-mannose 4,6 dehydratase SHELL_RS04400 PF00483 Nucleotidyl transferase SHELL_RS04425 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SHELL_RS04455 PF12706 Beta-lactamase superfamily domain SHELL_RS04455 PF00753 Metallo-beta-lactamase superfamily SHELL_RS04475 PF13427 Domain of unknown function (DUF4111) SHELL_RS04475 PF18765 Polymerase beta, Nucleotidyltransferase SHELL_RS04480 PF01979 Amidohydrolase family SHELL_RS04485 PF01380 SIS domain SHELL_RS04505 PF01112 Asparaginase SHELL_RS04520 PF00480 ROK family SHELL_RS04525 PF00561 alpha/beta hydrolase fold SHELL_RS04535 PF00133 tRNA synthetases class I (I, L, M and V) SHELL_RS04535 PF09334 tRNA synthetases class I (M) SHELL_RS04535 PF08264 Anticodon-binding domain of tRNA SHELL_RS04570 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SHELL_RS04615 PF00270 DEAD/DEAH box helicase SHELL_RS04615 PF09369 Domain of unknown function (DUF1998) SHELL_RS04615 PF00271 Helicase conserved C-terminal domain SHELL_RS04625 PF01523 Putative modulator of DNA gyrase SHELL_RS04630 PF01523 Putative modulator of DNA gyrase SHELL_RS04635 PF03099 Biotin/lipoate A/B protein ligase family SHELL_RS04635 PF02237 Biotin protein ligase C terminal domain SHELL_RS04645 PF01467 Cytidylyltransferase-like SHELL_RS04650 PF02163 Peptidase family M50 SHELL_RS04685 PF01966 HD domain SHELL_RS04785 PF02272 DHHA1 domain SHELL_RS04785 PF01368 DHH family SHELL_RS04795 PF13932 GidA associated domain SHELL_RS04795 PF01134 Glucose inhibited division protein A SHELL_RS04805 PF00591 Glycosyl transferase family, a/b domain SHELL_RS04805 PF02885 Glycosyl transferase family, helical bundle domain SHELL_RS04805 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SHELL_RS04820 PF07969 Amidohydrolase family SHELL_RS04830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SHELL_RS04830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SHELL_RS04830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SHELL_RS04830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SHELL_RS04835 PF02675 S-adenosylmethionine decarboxylase SHELL_RS04850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHELL_RS04855 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SHELL_RS04855 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SHELL_RS04860 PF00037 4Fe-4S binding domain SHELL_RS04865 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SHELL_RS04880 PF02779 Transketolase, pyrimidine binding domain SHELL_RS04880 PF02780 Transketolase, C-terminal domain SHELL_RS04880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SHELL_RS04885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHELL_RS04900 PF01554 MatE SHELL_RS04905 PF12704 MacB-like periplasmic core domain SHELL_RS04905 PF02687 FtsX-like permease family SHELL_RS04905 PF00005 ABC transporter SHELL_RS04915 PF00005 ABC transporter SHELL_RS04920 PF17284 Spermidine synthase tetramerisation domain SHELL_RS04945 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SHELL_RS04945 PF01189 16S rRNA methyltransferase RsmB/F SHELL_RS04945 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SHELL_RS04955 PF00999 Sodium/hydrogen exchanger family SHELL_RS04970 PF02785 Biotin carboxylase C-terminal domain SHELL_RS04970 PF00289 Biotin carboxylase, N-terminal domain SHELL_RS04970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SHELL_RS04970 PF00364 Biotin-requiring enzyme SHELL_RS04975 PF01039 Carboxyl transferase domain SHELL_RS05015 PF17868 AAA lid domain SHELL_RS05015 PF07728 AAA domain (dynein-related subfamily) SHELL_RS05015 PF12592 Protein of unknown function (DUF3763) SHELL_RS05060 PF00005 ABC transporter SHELL_RS05060 PF12704 MacB-like periplasmic core domain SHELL_RS05060 PF02687 FtsX-like permease family SHELL_RS05065 PF00005 ABC transporter SHELL_RS05070 PF00005 ABC transporter SHELL_RS05120 PF08323 Starch synthase catalytic domain SHELL_RS05120 PF00534 Glycosyl transferases group 1 SHELL_RS05125 PF03065 Glycosyl hydrolase family 57 SHELL_RS05125 PF09095 Domain of unknown function (DUF1926) SHELL_RS05125 PF09094 Domain of unknown function (DUF1925) SHELL_RS05130 PF00232 Glycosyl hydrolase family 1 SHELL_RS05135 PF07690 Major Facilitator Superfamily SHELL_RS05145 PF01636 Phosphotransferase enzyme family SHELL_RS05145 PF18085 Maltokinase N-terminal cap domain SHELL_RS05160 PF00005 ABC transporter SHELL_RS05175 PF08546 Ketopantoate reductase PanE/ApbA C terminal SHELL_RS05175 PF02558 Ketopantoate reductase PanE/ApbA SHELL_RS05180 PF02548 Ketopantoate hydroxymethyltransferase SHELL_RS05195 PF02441 Flavoprotein SHELL_RS05195 PF04127 DNA / pantothenate metabolism flavoprotein SHELL_RS05205 PF00152 tRNA synthetases class II (D, K and N) SHELL_RS05205 PF01336 OB-fold nucleic acid binding domain SHELL_RS05210 PF00730 HhH-GPD superfamily base excision DNA repair protein SHELL_RS05210 PF00633 Helix-hairpin-helix motif SHELL_RS05210 PF10576 Iron-sulfur binding domain of endonuclease III SHELL_RS05215 PF00174 Oxidoreductase molybdopterin binding domain SHELL_RS05230 PF02562 PhoH-like protein SHELL_RS05275 PF01008 Initiation factor 2 subunit family SHELL_RS05280 PF01008 Initiation factor 2 subunit family SHELL_RS05290 PF01883 Iron-sulfur cluster assembly protein SHELL_RS05295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHELL_RS05295 PF02403 Seryl-tRNA synthetase N-terminal domain SHELL_RS05320 PF12706 Beta-lactamase superfamily domain SHELL_RS05325 PF01523 Putative modulator of DNA gyrase SHELL_RS05330 PF01523 Putative modulator of DNA gyrase SHELL_RS05340 PF00270 DEAD/DEAH box helicase SHELL_RS05340 PF00271 Helicase conserved C-terminal domain SHELL_RS05340 PF08494 DEAD/H associated SHELL_RS05375 PF00155 Aminotransferase class I and II SHELL_RS05395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SHELL_RS05395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SHELL_RS05400 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS05400 PF12911 N-terminal TM domain of oligopeptide transport permease C SHELL_RS05405 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS05425 PF00005 ABC transporter SHELL_RS05425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS05430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHELL_RS05430 PF00005 ABC transporter SHELL_RS05435 PF00398 Ribosomal RNA adenine dimethylase SHELL_RS05440 PF06463 Molybdenum Cofactor Synthesis C SHELL_RS05440 PF04055 Radical SAM superfamily SHELL_RS05455 PF01435 Peptidase family M48 SHELL_RS05485 PF01068 ATP dependent DNA ligase domain SHELL_RS05485 PF04675 DNA ligase N terminus SHELL_RS05485 PF04679 ATP dependent DNA ligase C terminal region SHELL_RS05495 PF03167 Uracil DNA glycosylase superfamily SHELL_RS05515 PF13344 Haloacid dehalogenase-like hydrolase SHELL_RS05525 PF02540 NAD synthase SHELL_RS05530 PF01871 AMMECR1 SHELL_RS05540 PF00571 CBS domain SHELL_RS05540 PF01769 Divalent cation transporter SHELL_RS05540 PF03448 MgtE intracellular N domain SHELL_RS05545 PF00571 CBS domain SHELL_RS05550 PF00571 CBS domain SHELL_RS05550 PF01743 Poly A polymerase head domain SHELL_RS05585 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) SHELL_RS05615 PF00282 Pyridoxal-dependent decarboxylase conserved domain SHELL_RS05620 PF01434 Peptidase family M41 SHELL_RS05620 PF00004 ATPase family associated with various cellular activities (AAA) SHELL_RS05620 PF17862 AAA+ lid domain SHELL_RS05620 PF06480 FtsH Extracellular SHELL_RS05645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SHELL_RS05645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SHELL_RS05645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SHELL_RS05645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SHELL_RS05665 PF01351 Ribonuclease HII SHELL_RS05670 PF01926 50S ribosome-binding GTPase SHELL_RS05670 PF01018 GTP1/OBG SHELL_RS05685 PF01434 Peptidase family M41 SHELL_RS05685 PF00004 ATPase family associated with various cellular activities (AAA) SHELL_RS05685 PF17862 AAA+ lid domain SHELL_RS05705 PF03952 Enolase, N-terminal domain SHELL_RS05705 PF00113 Enolase, C-terminal TIM barrel domain SHELL_RS05725 PF01396 Topoisomerase DNA binding C4 zinc finger SHELL_RS05725 PF01751 Toprim domain SHELL_RS05725 PF01131 DNA topoisomerase SHELL_RS05740 PF00118 TCP-1/cpn60 chaperonin family SHELL_RS05790 PF02934 GatB/GatE catalytic domain SHELL_RS05790 PF02637 GatB domain SHELL_RS05795 PF00710 Asparaginase, N-terminal SHELL_RS05795 PF17763 Glutaminase/Asparaginase C-terminal domain SHELL_RS05820 PF03266 NTPase SHELL_RS05825 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase SHELL_RS05855 PF01931 Protein of unknown function DUF84 SHELL_RS05875 PF01255 Putative undecaprenyl diphosphate synthase SHELL_RS05885 PF13607 Succinyl-CoA ligase like flavodoxin domain SHELL_RS05885 PF13380 CoA binding domain SHELL_RS05890 PF13380 CoA binding domain SHELL_RS05890 PF13607 Succinyl-CoA ligase like flavodoxin domain SHELL_RS05895 PF16875 Glycosyl hydrolase family 36 N-terminal domain SHELL_RS05895 PF16874 Glycosyl hydrolase family 36 C-terminal domain SHELL_RS05895 PF00485 Phosphoribulokinase / Uridine kinase family SHELL_RS05905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SHELL_RS05905 PF14572 Phosphoribosyl synthetase-associated domain SHELL_RS05915 PF00753 Metallo-beta-lactamase superfamily SHELL_RS05915 PF12706 Beta-lactamase superfamily domain SHELL_RS05930 PF02834 LigT like Phosphoesterase SHELL_RS05955 PF01180 Dihydroorotate dehydrogenase SHELL_RS05980 PF17864 RuvB AAA lid domain SHELL_RS05980 PF05491 RuvB C-terminal winged helix domain SHELL_RS05980 PF05496 Holliday junction DNA helicase RuvB P-loop domain SHELL_RS06005 PF02254 TrkA-N domain SHELL_RS06005 PF02080 TrkA-C domain SHELL_RS06010 PF02386 Cation transport protein SHELL_RS06040 PF13860 FlgD Ig-like domain SHELL_RS06040 PF05922 Peptidase inhibitor I9 SHELL_RS06040 PF02225 PA domain SHELL_RS06040 PF00082 Subtilase family SHELL_RS06085 PF01925 Sulfite exporter TauE/SafE SHELL_RS06090 PF00248 Aldo/keto reductase family SHELL_RS06120 PF17863 AAA lid domain SHELL_RS06120 PF07726 ATPase family associated with various cellular activities (AAA) SHELL_RS06145 PF06745 KaiC SHELL_RS06155 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SHELL_RS06155 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SHELL_RS06185 PF00293 NUDIX domain SHELL_RS06185 PF13344 Haloacid dehalogenase-like hydrolase SHELL_RS06195 PF00850 Histone deacetylase domain SHELL_RS06225 PF01066 CDP-alcohol phosphatidyltransferase SHELL_RS06250 PF00293 NUDIX domain SHELL_RS06260 PF01813 ATP synthase subunit D SHELL_RS06275 PF01496 V-type ATPase 116kDa subunit family SHELL_RS06300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SHELL_RS06300 PF02874 ATP synthase alpha/beta family, beta-barrel domain SHELL_RS06300 PF16886 ATPsynthase alpha/beta subunit N-term extension SHELL_RS06305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SHELL_RS06305 PF02874 ATP synthase alpha/beta family, beta-barrel domain SHELL_RS06310 PF00596 Class II Aldolase and Adducin N-terminal domain SHELL_RS06330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHELL_RS06330 PF09180 Prolyl-tRNA synthetase, C-terminal SHELL_RS06330 PF03129 Anticodon binding domain SHELL_RS06345 PF02899 Phage integrase, N-terminal SAM-like domain SHELL_RS06345 PF00589 Phage integrase family SHELL_RS06380 PF01040 UbiA prenyltransferase family SHELL_RS06385 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SHELL_RS06385 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SHELL_RS06390 PF08544 GHMP kinases C terminal SHELL_RS06390 PF00288 GHMP kinases N terminal domain SHELL_RS06390 PF10509 Galactokinase galactose-binding signature SHELL_RS06465 PF02535 ZIP Zinc transporter SHELL_RS06470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SHELL_RS06470 PF01411 tRNA synthetases class II (A) SHELL_RS06470 PF02272 DHHA1 domain SHELL_RS06485 PF01253 Translation initiation factor SUI1 SHELL_RS06495 PF00491 Arginase family SHELL_RS06500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHELL_RS06500 PF03129 Anticodon binding domain SHELL_RS06515 PF04055 Radical SAM superfamily SHELL_RS06515 PF18693 TRAM domain SHELL_RS06515 PF00919 Uncharacterized protein family UPF0004 SHELL_RS06535 PF02441 Flavoprotein SHELL_RS06545 PF06745 KaiC SHELL_RS06550 PF17176 tRNA-binding domain SHELL_RS06550 PF13718 GNAT acetyltransferase 2 SHELL_RS06550 PF05127 Helicase SHELL_RS06550 PF08351 Domain of unknown function (DUF1726) SHELL_RS06555 PF17862 AAA+ lid domain SHELL_RS06555 PF01434 Peptidase family M41 SHELL_RS06555 PF00004 ATPase family associated with various cellular activities (AAA) SHELL_RS06555 PF06480 FtsH Extracellular SHELL_RS06560 PF06745 KaiC SHELL_RS06565 PF01751 Toprim domain SHELL_RS06565 PF01131 DNA topoisomerase SHELL_RS06565 PF17915 Reverse gyrase zinc finger SHELL_RS06565 PF00270 DEAD/DEAH box helicase SHELL_RS06580 PF01132 Elongation factor P (EF-P) OB domain SHELL_RS06580 PF09285 Elongation factor P, C-terminal SHELL_RS06580 PF08207 Elongation factor P (EF-P) KOW-like domain SHELL_RS06595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHELL_RS06595 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS06600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SHELL_RS06600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SHELL_RS06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS06600 PF13806 Rieske-like [2Fe-2S] domain SHELL_RS06600 PF18267 Rubredoxin NAD+ reductase C-terminal domain SHELL_RS06600 PF04324 BFD-like [2Fe-2S] binding domain SHELL_RS06605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHELL_RS06605 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS06610 PF02347 Glycine cleavage system P-protein SHELL_RS06615 PF02347 Glycine cleavage system P-protein SHELL_RS06620 PF08669 Glycine cleavage T-protein C-terminal barrel domain SHELL_RS06620 PF01571 Aminomethyltransferase folate-binding domain SHELL_RS06630 PF00464 Serine hydroxymethyltransferase SHELL_RS06635 PF01597 Glycine cleavage H-protein SHELL_RS06690 PF01938 TRAM domain SHELL_RS06690 PF04055 Radical SAM superfamily SHELL_RS06690 PF00919 Uncharacterized protein family UPF0004 SHELL_RS06705 PF02386 Cation transport protein SHELL_RS06730 PF02649 Type I GTP cyclohydrolase folE2 SHELL_RS06735 PF01242 6-pyruvoyl tetrahydropterin synthase SHELL_RS06755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SHELL_RS06755 PF01411 tRNA synthetases class II (A) SHELL_RS06755 PF02272 DHHA1 domain SHELL_RS06770 PF00687 Ribosomal protein L1p/L10e family SHELL_RS06775 PF03946 Ribosomal protein L11, N-terminal domain SHELL_RS06775 PF00298 Ribosomal protein L11, RNA binding domain SHELL_RS06790 PF02881 SRP54-type protein, helical bundle domain SHELL_RS06790 PF00448 SRP54-type protein, GTPase domain SHELL_RS06845 PF03477 ATP cone domain SHELL_RS06845 PF13597 Anaerobic ribonucleoside-triphosphate reductase SHELL_RS06855 PF02511 Thymidylate synthase complementing protein SHELL_RS06860 PF00692 dUTPase SHELL_RS06865 PF07690 Major Facilitator Superfamily SHELL_RS06875 PF03749 Sugar fermentation stimulation protein RE domain SHELL_RS06875 PF17746 SfsA N-terminal OB domain SHELL_RS06895 PF00107 Zinc-binding dehydrogenase SHELL_RS06895 PF08240 Alcohol dehydrogenase GroES-like domain SHELL_RS06900 PF13247 4Fe-4S dicluster domain SHELL_RS06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS06905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SHELL_RS06905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SHELL_RS06915 PF00483 Nucleotidyl transferase SHELL_RS06935 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SHELL_RS06935 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SHELL_RS06940 PF01569 PAP2 superfamily SHELL_RS06950 PF05175 Methyltransferase small domain SHELL_RS06965 PF05191 Adenylate kinase, active site lid SHELL_RS06995 PF00333 Ribosomal protein S5, N-terminal domain SHELL_RS06995 PF03719 Ribosomal protein S5, C-terminal domain SHELL_RS07015 PF00347 Ribosomal protein L6 SHELL_RS07020 PF00410 Ribosomal protein S8 SHELL_RS07030 PF00281 Ribosomal protein L5 SHELL_RS07030 PF00673 ribosomal L5P family C-terminus SHELL_RS07035 PF01479 S4 domain SHELL_RS07035 PF00163 Ribosomal protein S4/S9 N-terminal domain SHELL_RS07040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SHELL_RS07040 PF00467 KOW motif SHELL_RS07045 PF00238 Ribosomal protein L14p/L23e SHELL_RS07050 PF00366 Ribosomal protein S17 SHELL_RS07060 PF00831 Ribosomal L29 protein SHELL_RS07065 PF07650 KH domain SHELL_RS07065 PF00189 Ribosomal protein S3, C-terminal domain SHELL_RS07070 PF00237 Ribosomal protein L22p/L17e SHELL_RS07075 PF00203 Ribosomal protein S19 SHELL_RS07095 PF00181 Ribosomal Proteins L2, RNA binding domain SHELL_RS07095 PF03947 Ribosomal Proteins L2, C-terminal domain SHELL_RS07100 PF00276 Ribosomal protein L23 SHELL_RS07110 PF00297 Ribosomal protein L3 SHELL_RS07120 PF05872 Bacterial protein of unknown function (DUF853) SHELL_RS07140 PF08494 DEAD/H associated SHELL_RS07140 PF00270 DEAD/DEAH box helicase SHELL_RS07140 PF00271 Helicase conserved C-terminal domain SHELL_RS07180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SHELL_RS07180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SHELL_RS07185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHELL_RS07205 PF01884 PcrB family SHELL_RS07220 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SHELL_RS07230 PF01008 Initiation factor 2 subunit family SHELL_RS07245 PF13393 Histidyl-tRNA synthetase SHELL_RS07250 PF01139 tRNA-splicing ligase RtcB SHELL_RS07280 PF03459 TOBE domain SHELL_RS07280 PF00005 ABC transporter SHELL_RS07280 PF17912 MalK OB fold domain SHELL_RS07285 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS07290 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS07295 PF01547 Bacterial extracellular solute-binding protein SHELL_RS07305 PF03129 Anticodon binding domain SHELL_RS07305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHELL_RS07305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SHELL_RS07305 PF02824 TGS domain SHELL_RS07315 PF18073 Rubredoxin metal binding domain SHELL_RS07330 PF01230 HIT domain SHELL_RS07360 PF17915 Reverse gyrase zinc finger SHELL_RS07360 PF01751 Toprim domain SHELL_RS07360 PF00270 DEAD/DEAH box helicase SHELL_RS07360 PF01131 DNA topoisomerase SHELL_RS07385 PF00271 Helicase conserved C-terminal domain SHELL_RS07385 PF00270 DEAD/DEAH box helicase SHELL_RS07395 PF00156 Phosphoribosyl transferase domain SHELL_RS07430 PF00924 Mechanosensitive ion channel SHELL_RS07495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SHELL_RS07500 PF13685 Iron-containing alcohol dehydrogenase SHELL_RS07505 PF00227 Proteasome subunit SHELL_RS07510 PF00753 Metallo-beta-lactamase superfamily SHELL_RS07510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SHELL_RS07510 PF10996 Beta-Casp domain SHELL_RS07515 PF01467 Cytidylyltransferase-like SHELL_RS07520 PF01137 RNA 3'-terminal phosphate cyclase SHELL_RS07520 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain SHELL_RS07525 PF01018 GTP1/OBG SHELL_RS07525 PF09269 Domain of unknown function (DUF1967) SHELL_RS07525 PF01926 50S ribosome-binding GTPase SHELL_RS07535 PF00227 Proteasome subunit SHELL_RS07540 PF04493 Endonuclease V SHELL_RS07555 PF05221 S-adenosyl-L-homocysteine hydrolase SHELL_RS07555 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SHELL_RS07565 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHELL_RS07570 PF01895 PhoU domain SHELL_RS07575 PF00005 ABC transporter SHELL_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component SHELL_RS07600 PF00248 Aldo/keto reductase family SHELL_RS07610 PF00145 C-5 cytosine-specific DNA methylase SHELL_RS07625 PF16360 GTP-binding GTPase Middle Region SHELL_RS07625 PF13167 GTP-binding GTPase N-terminal SHELL_RS07625 PF01926 50S ribosome-binding GTPase SHELL_RS07635 PF17862 AAA+ lid domain SHELL_RS07635 PF06480 FtsH Extracellular SHELL_RS07635 PF01434 Peptidase family M41 SHELL_RS07635 PF00004 ATPase family associated with various cellular activities (AAA) SHELL_RS07650 PF01702 Queuine tRNA-ribosyltransferase SHELL_RS07675 PF00118 TCP-1/cpn60 chaperonin family SHELL_RS07695 PF00005 ABC transporter SHELL_RS07700 PF01950 Fructose-1,6-bisphosphatase SHELL_RS07705 PF00121 Triosephosphate isomerase SHELL_RS07715 PF02887 Pyruvate kinase, alpha/beta domain SHELL_RS07715 PF00224 Pyruvate kinase, barrel domain SHELL_RS07760 PF00557 Metallopeptidase family M24 SHELL_RS07775 PF01751 Toprim domain SHELL_RS07775 PF13331 Domain of unknown function (DUF4093) SHELL_RS07800 PF00291 Pyridoxal-phosphate dependent enzyme SHELL_RS07825 PF08753 NikR C terminal nickel binding domain SHELL_RS07825 PF01402 Ribbon-helix-helix protein, copG family SHELL_RS07860 PF00136 DNA polymerase family B SHELL_RS07860 PF03104 DNA polymerase family B, exonuclease domain SHELL_RS07895 PF00679 Elongation factor G C-terminus SHELL_RS07895 PF14492 Elongation Factor G, domain II SHELL_RS07895 PF03764 Elongation factor G, domain IV SHELL_RS07895 PF03144 Elongation factor Tu domain 2 SHELL_RS07895 PF00009 Elongation factor Tu GTP binding domain SHELL_RS07930 PF00575 S1 RNA binding domain SHELL_RS07930 PF03725 3' exoribonuclease family, domain 2 SHELL_RS07930 PF01138 3' exoribonuclease family, domain 1 SHELL_RS07930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SHELL_RS07930 PF00013 KH domain SHELL_RS07935 PF03725 3' exoribonuclease family, domain 2 SHELL_RS07935 PF01138 3' exoribonuclease family, domain 1 SHELL_RS07980 PF06071 Protein of unknown function (DUF933) SHELL_RS07980 PF01926 50S ribosome-binding GTPase SHELL_RS07990 PF00483 Nucleotidyl transferase SHELL_RS08010 PF02568 Thiamine biosynthesis protein (ThiI) SHELL_RS08010 PF02926 THUMP domain SHELL_RS08035 PF01725 Ham1 family SHELL_RS08045 PF00814 Glycoprotease family SHELL_RS08080 PF00009 Elongation factor Tu GTP binding domain SHELL_RS08080 PF03144 Elongation factor Tu domain 2 SHELL_RS08080 PF03143 Elongation factor Tu C-terminal domain SHELL_RS08090 PF04760 Translation initiation factor IF-2, N-terminal region SHELL_RS08090 PF11987 Translation-initiation factor 2 SHELL_RS08090 PF00009 Elongation factor Tu GTP binding domain SHELL_RS08095 PF00334 Nucleoside diphosphate kinase SHELL_RS08115 PF00749 tRNA synthetases class I (E and Q), catalytic domain SHELL_RS08125 PF01070 FMN-dependent dehydrogenase SHELL_RS08130 PF01875 Memo-like protein SHELL_RS08135 PF00318 Ribosomal protein S2 SHELL_RS08145 PF00380 Ribosomal protein S9/S16 SHELL_RS08150 PF00572 Ribosomal protein L13 SHELL_RS08155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SHELL_RS08165 PF00411 Ribosomal protein S11 SHELL_RS08170 PF01479 S4 domain SHELL_RS08170 PF00163 Ribosomal protein S4/S9 N-terminal domain SHELL_RS08175 PF00416 Ribosomal protein S13/S18 SHELL_RS08185 PF00338 Ribosomal protein S10p/S20e SHELL_RS08190 PF00009 Elongation factor Tu GTP binding domain SHELL_RS08195 PF00177 Ribosomal protein S7p/S5e SHELL_RS08220 PF04997 RNA polymerase Rpb1, domain 1 SHELL_RS08220 PF00623 RNA polymerase Rpb1, domain 2 SHELL_RS08220 PF04983 RNA polymerase Rpb1, domain 3 SHELL_RS08220 PF05000 RNA polymerase Rpb1, domain 4 SHELL_RS08220 PF04998 RNA polymerase Rpb1, domain 5 SHELL_RS08225 PF04997 RNA polymerase Rpb1, domain 1 SHELL_RS08225 PF00623 RNA polymerase Rpb1, domain 2 SHELL_RS08225 PF04983 RNA polymerase Rpb1, domain 3 SHELL_RS08225 PF05000 RNA polymerase Rpb1, domain 4 SHELL_RS08225 PF04998 RNA polymerase Rpb1, domain 5 SHELL_RS08230 PF00562 RNA polymerase Rpb2, domain 6 SHELL_RS08230 PF10385 RNA polymerase beta subunit external 1 domain SHELL_RS08230 PF04563 RNA polymerase beta subunit SHELL_RS08230 PF04560 RNA polymerase Rpb2, domain 7 SHELL_RS08230 PF04561 RNA polymerase Rpb2, domain 2 SHELL_RS08230 PF04565 RNA polymerase Rpb2, domain 3 SHELL_RS08245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SHELL_RS08245 PF13378 Enolase C-terminal domain-like SHELL_RS08250 PF13419 Haloacid dehalogenase-like hydrolase