locus-tag	class	description
DAIF1_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DAIF1_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DAIF1_RS00020	COG0187	DNA topoisomerase II activity
DAIF1_RS00025	COG1266	CAAX protease self-immunity
DAIF1_RS00030	COG0501	Belongs to the peptidase M48B family
DAIF1_RS00085	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
DAIF1_RS00095	COG4772	TonB-dependent receptor
DAIF1_RS00130	COG1012	belongs to the aldehyde dehydrogenase family
DAIF1_RS00135	COG3284	Transcriptional regulator
DAIF1_RS00140	COG0800	Aldolase
DAIF1_RS00145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DAIF1_RS00180	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DAIF1_RS00195	COG3507	Belongs to the glycosyl hydrolase 43 family
DAIF1_RS00200	COG1609	Transcriptional regulator
DAIF1_RS00210	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS00215	COG2755	lipolytic protein G-D-S-L family
DAIF1_RS00225	COG3186	Phenylalanine-4-hydroxylase
DAIF1_RS00230	COG1522	sequence-specific DNA binding
DAIF1_RS00240	COG1752	Esterase of the alpha-beta hydrolase superfamily
DAIF1_RS00250	COG4771	TonB-dependent receptor
DAIF1_RS00270	COG1122	ATPase activity
DAIF1_RS00285	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DAIF1_RS00295	COG0515	serine threonine protein kinase
DAIF1_RS00295	COG2815	serine threonine protein kinase
DAIF1_RS00300	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
DAIF1_RS00310	COG1435	thymidine kinase activity
DAIF1_RS00315	COG0210	DNA helicase
DAIF1_RS00325	COG3132	Protein of unknown function, DUF480
DAIF1_RS00330	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DAIF1_RS00335	COG0284	orotidine-5'-phosphate decarboxylase activity
DAIF1_RS00340	COG5640	endopeptidase activity
DAIF1_RS00350	COG2937	Belongs to the GPAT DAPAT family
DAIF1_RS00365	COG0037	tRNA processing
DAIF1_RS00370	COG2974	May be involved in recombination
DAIF1_RS00380	COG1803	Methylglyoxal synthase
DAIF1_RS00385	COG2205	protein histidine kinase activity
DAIF1_RS00385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DAIF1_RS00390	COG0493	'glutamate synthase
DAIF1_RS00395	COG0070	glutamate synthase
DAIF1_RS00395	COG0069	glutamate synthase activity
DAIF1_RS00395	COG0067	glutamate synthase
DAIF1_RS00415	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS00420	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DAIF1_RS00445	COG1205	dead DEAH box helicase
DAIF1_RS00445	COG1111	helicase
DAIF1_RS00480	COG0714	Associated with various cellular activities
DAIF1_RS00500	COG0312	modulator of DNA gyrase
DAIF1_RS00515	COG3550	peptidyl-serine autophosphorylation
DAIF1_RS00520	COG1396	sequence-specific DNA binding
DAIF1_RS00535	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DAIF1_RS00555	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DAIF1_RS00595	COG1968	undecaprenyl-diphosphatase activity
DAIF1_RS00600	COG0174	glutamine synthetase
DAIF1_RS00605	COG0347	Belongs to the P(II) protein family
DAIF1_RS00610	COG0004	ammonium transporteR
DAIF1_RS00620	COG3279	Response regulator of the LytR AlgR family
DAIF1_RS00635	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DAIF1_RS00650	COG3852	Histidine kinase
DAIF1_RS00655	COG2204	response regulator
DAIF1_RS00660	COG2032	superoxide dismutase activity
DAIF1_RS00665	COG2032	superoxide dismutase activity
DAIF1_RS00675	COG0183	Belongs to the thiolase family
DAIF1_RS00710	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
DAIF1_RS00715	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DAIF1_RS00750	COG1309	transcriptional regulator
DAIF1_RS00755	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS00760	COG2207	Transcriptional regulator
DAIF1_RS00820	COG2837	iron assimilation
DAIF1_RS00860	COG2197	response regulator
DAIF1_RS00865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DAIF1_RS00865	COG2205	protein histidine kinase activity
DAIF1_RS00870	COG3474	cytochrome
DAIF1_RS00880	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS00885	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DAIF1_RS00895	COG0612	Peptidase, M16
DAIF1_RS00905	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DAIF1_RS00910	COG0596	Alpha beta hydrolase
DAIF1_RS00920	COG0318	PFAM AMP-dependent synthetase and ligase
DAIF1_RS00925	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DAIF1_RS00935	COG1181	Belongs to the D-alanine--D-alanine ligase family
DAIF1_RS00950	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DAIF1_RS00955	COG4122	O-methyltransferase activity
DAIF1_RS00960	COG0564	pseudouridine synthase activity
DAIF1_RS00980	COG0339	signal peptide processing
DAIF1_RS00995	COG0681	Belongs to the peptidase S26 family
DAIF1_RS01000	COG2814	Major facilitator Superfamily
DAIF1_RS01005	COG0583	DNA-binding transcription factor activity
DAIF1_RS01010	COG0583	DNA-binding transcription factor activity
DAIF1_RS01015	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DAIF1_RS01020	COG2224	Isocitrate lyase
DAIF1_RS01050	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DAIF1_RS01055	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS01075	COG0697	spore germination
DAIF1_RS01085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DAIF1_RS01095	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DAIF1_RS01100	COG1280	lysine exporter protein (LysE YggA)
DAIF1_RS01105	COG1607	acyl-coa hydrolase
DAIF1_RS01115	COG1902	pentaerythritol trinitrate reductase activity
DAIF1_RS01145	COG1335	isochorismatase
DAIF1_RS01150	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DAIF1_RS01155	COG1752	Esterase of the alpha-beta hydrolase superfamily
DAIF1_RS01170	COG3800	Transcriptional regulator
DAIF1_RS01170	COG1396	sequence-specific DNA binding
DAIF1_RS01180	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS01185	COG1024	Enoyl-CoA hydratase
DAIF1_RS01190	COG1024	Enoyl-CoA hydratase
DAIF1_RS01210	COG1764	response to oxidative stress
DAIF1_RS01315	COG0659	secondary active sulfate transmembrane transporter activity
DAIF1_RS01345	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DAIF1_RS01375	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DAIF1_RS01375	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DAIF1_RS01380	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DAIF1_RS01395	COG3657	addiction module killer protein
DAIF1_RS01400	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DAIF1_RS01435	COG3237	CsbD-like
DAIF1_RS01445	COG0180	Tryptophanyl-tRNA synthetase
DAIF1_RS01470	COG0477	Major facilitator Superfamily
DAIF1_RS01475	COG0697	spore germination
DAIF1_RS01490	COG0577	efflux transmembrane transporter activity
DAIF1_RS01490	COG1136	(ABC) transporter
DAIF1_RS01500	COG1136	(ABC) transporter
DAIF1_RS01505	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS01515	COG4585	Histidine kinase
DAIF1_RS01520	COG2197	response regulator
DAIF1_RS01525	COG3038	cytochrome b561
DAIF1_RS01535	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DAIF1_RS01550	COG0628	permease
DAIF1_RS01570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DAIF1_RS01585	COG5507	3-demethylubiquinone-9 3-methyltransferase
DAIF1_RS01595	COG2771	luxR family
DAIF1_RS01595	COG2200	EAL domain
DAIF1_RS01610	COG2814	Major facilitator Superfamily
DAIF1_RS01615	COG0583	DNA-binding transcription factor activity
DAIF1_RS01620	COG4807	Protein conserved in bacteria
DAIF1_RS01630	COG4221	oxidoreductase activity
DAIF1_RS01640	COG0018	arginyl-trna synthetase
DAIF1_RS01645	COG2003	Belongs to the UPF0758 family
DAIF1_RS01650	COG2197	response regulator
DAIF1_RS01655	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DAIF1_RS01660	COG0756	dUTP diphosphatase activity
DAIF1_RS01675	COG2205	protein histidine kinase activity
DAIF1_RS01685	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DAIF1_RS01690	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DAIF1_RS01705	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DAIF1_RS01710	COG0708	Exodeoxyribonuclease III
DAIF1_RS01715	COG2223	nitrite transmembrane transporter activity
DAIF1_RS01730	COG0739	heme binding
DAIF1_RS01735	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DAIF1_RS01795	COG2234	aminopeptidase activity
DAIF1_RS01805	COG4942	peptidase
DAIF1_RS01810	COG0793	Belongs to the peptidase S41A family
DAIF1_RS01820	COG2067	long-chain fatty acid transport protein
DAIF1_RS01845	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DAIF1_RS01850	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DAIF1_RS01890	COG0109	protoheme IX farnesyltransferase activity
DAIF1_RS01905	COG0358	DNA primase activity
DAIF1_RS01910	COG1295	ribonuclease BN
DAIF1_RS01915	COG1610	YqeY-like protein
DAIF1_RS01925	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DAIF1_RS01935	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DAIF1_RS01940	COG0668	transmembrane transport
DAIF1_RS01955	COG2133	pyrroloquinoline quinone binding
DAIF1_RS01960	COG4682	membrane
DAIF1_RS01970	COG0531	amino acid
DAIF1_RS01980	COG1737	Transcriptional regulator
DAIF1_RS01985	COG4948	Mandelate Racemase Muconate Lactonizing
DAIF1_RS02040	COG5383	Protein conserved in bacteria
DAIF1_RS02050	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
DAIF1_RS02055	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DAIF1_RS02085	COG0778	Nitroreductase
DAIF1_RS02090	COG2353	YceI-like domain
DAIF1_RS02105	COG2375	cellular response to nickel ion
DAIF1_RS02210	COG0322	excinuclease ABC activity
DAIF1_RS02255	COG2267	carboxylic ester hydrolase activity
DAIF1_RS02270	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
DAIF1_RS02315	COG0488	(ABC) transporter
DAIF1_RS02320	COG0583	DNA-binding transcription factor activity
DAIF1_RS02330	COG2814	Major facilitator Superfamily
DAIF1_RS02335	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DAIF1_RS02340	COG1113	amino acid transport
DAIF1_RS02350	COG0741	lytic transglycosylase activity
DAIF1_RS02375	COG2764	glyoxalase bleomycin resistance protein dioxygenase
DAIF1_RS02385	COG5507	3-demethylubiquinone-9 3-methyltransferase
DAIF1_RS02390	COG4941	Belongs to the sigma-70 factor family
DAIF1_RS02420	COG3275	phosphorelay sensor kinase activity
DAIF1_RS02425	COG3279	Response regulator of the LytR AlgR family
DAIF1_RS02445	COG3590	peptidase
DAIF1_RS02450	COG5001	Diguanylate cyclase
DAIF1_RS02455	COG0583	DNA-binding transcription factor activity
DAIF1_RS02465	COG3384	dioxygenase
DAIF1_RS02470	COG0025	NhaP-type Na H and K H
DAIF1_RS02495	COG1360	Flagellar Motor Protein
DAIF1_RS02525	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DAIF1_RS02540	COG2205	protein histidine kinase activity
DAIF1_RS02555	COG2813	Specifically methylates the guanine in position
DAIF1_RS02560	COG1187	pseudouridine synthase activity
DAIF1_RS02565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DAIF1_RS02575	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DAIF1_RS02580	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DAIF1_RS02595	COG0583	DNA-binding transcription factor activity
DAIF1_RS02600	COG2226	methyltransferase
DAIF1_RS02625	COG1956	GAF domain-containing protein
DAIF1_RS02630	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DAIF1_RS02635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DAIF1_RS02640	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DAIF1_RS02645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DAIF1_RS02645	COG0785	Cytochrome C biogenesis protein
DAIF1_RS02650	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DAIF1_RS02655	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS02660	COG5002	protein histidine kinase activity
DAIF1_RS02665	COG2205	protein histidine kinase activity
DAIF1_RS02670	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS02680	COG0720	synthase
DAIF1_RS02700	COG0513	Belongs to the DEAD box helicase family
DAIF1_RS02715	COG0625	glutathione transferase activity
DAIF1_RS02720	COG1573	uracil-dna glycosylase
DAIF1_RS02755	COG0626	cystathionine gamma-synthase activity
DAIF1_RS02820	COG2226	methyltransferase
DAIF1_RS02830	COG0277	FAD linked oxidase domain protein
DAIF1_RS02835	COG0546	phosphoglycolate phosphatase activity
DAIF1_RS02835	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
DAIF1_RS02855	COG2246	polysaccharide biosynthetic process
DAIF1_RS02900	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DAIF1_RS02935	COG1127	ABC transporter
DAIF1_RS02940	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DAIF1_RS02955	COG0442	prolyl-tRNA aminoacylation
DAIF1_RS02970	COG1183	phosphatidylcholine synthase activity
DAIF1_RS02990	COG0525	valine-tRNA ligase activity
DAIF1_RS03005	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DAIF1_RS03015	COG0795	lipopolysaccharide-transporting ATPase activity
DAIF1_RS03025	COG4974	Belongs to the 'phage' integrase family
DAIF1_RS03040	COG0047	phosphoribosylformylglycinamidine synthase activity
DAIF1_RS03040	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DAIF1_RS03050	COG1404	Belongs to the peptidase S8 family
DAIF1_RS03055	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DAIF1_RS03060	COG1459	type II secretion system
DAIF1_RS03065	COG2165	general secretion pathway protein
DAIF1_RS03070	COG4970	Tfp pilus assembly protein FimT
DAIF1_RS03075	COG2165	general secretion pathway protein
DAIF1_RS03080	COG4795	General secretion pathway protein
DAIF1_RS03085	COG3156	type II secretion system protein K
DAIF1_RS03090	COG3166	PFAM Fimbrial assembly family protein
DAIF1_RS03105	COG1450	Type ii and iii secretion system protein
DAIF1_RS03115	COG0463	Glycosyl transferase, family 2
DAIF1_RS03135	COG2194	sulfuric ester hydrolase activity
DAIF1_RS03150	COG1215	transferase activity, transferring glycosyl groups
DAIF1_RS03155	COG1215	transferase activity, transferring glycosyl groups
DAIF1_RS03160	COG0457	Tetratricopeptide repeat
DAIF1_RS03160	COG3118	belongs to the thioredoxin family
DAIF1_RS03165	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DAIF1_RS03170	COG2252	PERMEase
DAIF1_RS03180	COG0488	(ABC) transporter
DAIF1_RS03195	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DAIF1_RS03210	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DAIF1_RS03215	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DAIF1_RS03215	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DAIF1_RS03245	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DAIF1_RS03250	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DAIF1_RS03290	COG2755	lipolytic protein G-D-S-L family
DAIF1_RS03290	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DAIF1_RS03295	COG0277	FAD linked oxidase domain protein
DAIF1_RS03300	COG1988	membrane-bound metal-dependent
DAIF1_RS03335	COG2001	Belongs to the MraZ family
DAIF1_RS03340	COG0275	rRNA processing
DAIF1_RS03345	COG3116	cell division
DAIF1_RS03355	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DAIF1_RS03360	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DAIF1_RS03380	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DAIF1_RS03385	COG1181	Belongs to the D-alanine--D-alanine ligase family
DAIF1_RS03390	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DAIF1_RS03400	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DAIF1_RS03405	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
DAIF1_RS03415	COG0739	heme binding
DAIF1_RS03420	COG0653	protein targeting
DAIF1_RS03425	COG0494	nUDIX hydrolase
DAIF1_RS03435	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DAIF1_RS03460	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DAIF1_RS03465	COG0457	Tetratricopeptide repeat
DAIF1_RS03480	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DAIF1_RS03495	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DAIF1_RS03500	COG1607	acyl-coa hydrolase
DAIF1_RS03505	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DAIF1_RS03525	COG4106	trans-aconitate 2-methyltransferase activity
DAIF1_RS03530	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DAIF1_RS03540	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DAIF1_RS03545	COG0667	Aldo Keto reductase
DAIF1_RS03555	COG4771	TonB-dependent receptor
DAIF1_RS03570	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DAIF1_RS03575	COG4181	ATPase activity
DAIF1_RS03590	COG0642	Histidine kinase
DAIF1_RS03600	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DAIF1_RS03605	COG0861	Integral membrane protein TerC family
DAIF1_RS03610	COG2814	Major facilitator Superfamily
DAIF1_RS03615	COG1704	LemA family
DAIF1_RS03630	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DAIF1_RS03635	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DAIF1_RS03650	COG3738	Protein conserved in bacteria
DAIF1_RS03655	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DAIF1_RS03660	COG2967	ApaG domain
DAIF1_RS03670	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DAIF1_RS03680	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DAIF1_RS03690	COG2096	Adenosyltransferase
DAIF1_RS03700	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DAIF1_RS03705	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DAIF1_RS03715	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
DAIF1_RS03730	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DAIF1_RS03740	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DAIF1_RS03745	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DAIF1_RS03750	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DAIF1_RS03755	COG0583	DNA-binding transcription factor activity
DAIF1_RS03760	COG3634	alkyl hydroperoxide reductase activity
DAIF1_RS03780	COG0583	DNA-binding transcription factor activity
DAIF1_RS03820	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DAIF1_RS03845	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DAIF1_RS03860	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DAIF1_RS03865	COG1404	Belongs to the peptidase S8 family
DAIF1_RS03885	COG1295	ribonuclease BN
DAIF1_RS03890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DAIF1_RS03905	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DAIF1_RS03910	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DAIF1_RS03925	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DAIF1_RS03935	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DAIF1_RS03945	COG0193	aminoacyl-tRNA hydrolase activity
DAIF1_RS03950	COG0012	GTP binding
DAIF1_RS03960	COG2197	response regulator
DAIF1_RS03965	COG2205	protein histidine kinase activity
DAIF1_RS03965	COG0784	Response regulator, receiver
DAIF1_RS03970	COG2200	EAL domain
DAIF1_RS03970	COG2199	diguanylate cyclase activity
DAIF1_RS03970	COG2203	Gaf domain
DAIF1_RS03975	COG2205	protein histidine kinase activity
DAIF1_RS03975	COG0784	Response regulator, receiver
DAIF1_RS03980	COG4206	TonB-dependent receptor
DAIF1_RS03985	COG4242	Belongs to the peptidase S51 family
DAIF1_RS04010	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DAIF1_RS04025	COG0250	Participates in transcription elongation, termination and antitermination
DAIF1_RS04030	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DAIF1_RS04035	COG0081	regulation of translation
DAIF1_RS04045	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DAIF1_RS04050	COG0222	ribosome binding
DAIF1_RS04055	COG0085	RNA polymerase activity
DAIF1_RS04060	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DAIF1_RS04075	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DAIF1_RS04080	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DAIF1_RS04085	COG0051	transcription antitermination factor activity, RNA binding
DAIF1_RS04090	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DAIF1_RS04095	COG0088	Forms part of the polypeptide exit tunnel
DAIF1_RS04100	COG0089	rRNA binding
DAIF1_RS04105	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DAIF1_RS04110	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DAIF1_RS04115	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DAIF1_RS04120	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DAIF1_RS04125	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DAIF1_RS04130	COG0255	Belongs to the universal ribosomal protein uL29 family
DAIF1_RS04135	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DAIF1_RS04140	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DAIF1_RS04145	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DAIF1_RS04150	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DAIF1_RS04155	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DAIF1_RS04160	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DAIF1_RS04165	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DAIF1_RS04170	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DAIF1_RS04175	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DAIF1_RS04180	COG1841	ribosomal large subunit assembly
DAIF1_RS04190	COG0201	protein transport
DAIF1_RS04195	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DAIF1_RS04200	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DAIF1_RS04205	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DAIF1_RS04210	COG0202	RNA polymerase activity
DAIF1_RS04215	COG0203	ribosomal protein L17
DAIF1_RS04230	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
DAIF1_RS04245	COG0154	amidase activity
DAIF1_RS04260	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DAIF1_RS04265	COG0039	L-malate dehydrogenase activity
DAIF1_RS04280	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DAIF1_RS04295	COG0625	glutathione transferase activity
DAIF1_RS04305	COG0446	pyridine nucleotide-disulphide oxidoreductase
DAIF1_RS04305	COG1902	pentaerythritol trinitrate reductase activity
DAIF1_RS04310	COG2364	Membrane
DAIF1_RS04315	COG0604	alcohol dehydrogenase
DAIF1_RS04330	COG1187	pseudouridine synthase activity
DAIF1_RS04350	COG1063	alcohol dehydrogenase
DAIF1_RS04360	COG0406	alpha-ribazole phosphatase activity
DAIF1_RS04365	COG0285	dihydrofolate synthase activity
DAIF1_RS04385	COG2833	Protein of unknown function (DUF455)
DAIF1_RS04395	COG3291	Pkd domain containing protein
DAIF1_RS04400	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DAIF1_RS04405	COG0671	phosphoesterase, PA-phosphatase related
DAIF1_RS04410	COG0438	transferase activity, transferring glycosyl groups
DAIF1_RS04415	COG4206	TonB-dependent receptor
DAIF1_RS04420	COG0248	Ppx GppA phosphatase
DAIF1_RS04425	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DAIF1_RS04440	COG4783	chaperone-mediated protein folding
DAIF1_RS04455	COG0473	3-isopropylmalate dehydrogenase activity
DAIF1_RS04520	COG0544	peptidyl-prolyl cis-trans isomerase activity
DAIF1_RS04530	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DAIF1_RS04565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DAIF1_RS04570	COG1388	LysM domain
DAIF1_RS04570	COG3942	CHAP domain
DAIF1_RS04575	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DAIF1_RS04590	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DAIF1_RS04595	COG0631	protein serine/threonine phosphatase activity
DAIF1_RS04610	COG0859	PFAM glycosyl transferase family 9
DAIF1_RS04615	COG3642	lipopolysaccharide core region biosynthetic process
DAIF1_RS04620	COG1234	tRNA 3'-trailer cleavage
DAIF1_RS04635	COG2076	Multidrug Resistance protein
DAIF1_RS04665	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DAIF1_RS04675	COG0537	adenosine 5'-monophosphoramidase activity
DAIF1_RS04695	COG0714	Associated with various cellular activities
DAIF1_RS04710	COG1399	metal-binding, possibly nucleic acid-binding protein
DAIF1_RS04715	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DAIF1_RS04720	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DAIF1_RS04730	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DAIF1_RS04745	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DAIF1_RS04750	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DAIF1_RS04755	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DAIF1_RS04760	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DAIF1_RS04785	COG1942	4-Oxalocrotonate Tautomerase
DAIF1_RS04795	COG4774	siderophore transport
DAIF1_RS04825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DAIF1_RS04830	COG0697	spore germination
DAIF1_RS04835	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS04840	COG0583	DNA-binding transcription factor activity
DAIF1_RS04845	COG0583	DNA-binding transcription factor activity
DAIF1_RS04850	COG0477	Major facilitator Superfamily
DAIF1_RS04860	COG2205	protein histidine kinase activity
DAIF1_RS04910	COG0583	DNA-binding transcription factor activity
DAIF1_RS04935	COG0667	Aldo Keto reductase
DAIF1_RS04955	COG2818	Glycosylase
DAIF1_RS04960	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DAIF1_RS04965	COG1678	Uncharacterized ACR, COG1678
DAIF1_RS04970	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DAIF1_RS04975	COG0540	Belongs to the ATCase OTCase family
DAIF1_RS04995	COG2239	Acts as a magnesium transporter
DAIF1_RS05000	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DAIF1_RS05015	COG1660	Displays ATPase and GTPase activities
DAIF1_RS05020	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DAIF1_RS05025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DAIF1_RS05030	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DAIF1_RS05040	COG1137	ATPase activity
DAIF1_RS05055	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DAIF1_RS05070	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DAIF1_RS05090	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DAIF1_RS05110	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DAIF1_RS05120	COG0628	permease
DAIF1_RS05130	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DAIF1_RS05140	COG2261	transglycosylase associated protein
DAIF1_RS05170	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DAIF1_RS05175	COG1477	protein flavinylation
DAIF1_RS05195	COG4771	TonB-dependent receptor
DAIF1_RS05205	COG3128	pkhd-type hydroxylase
DAIF1_RS05210	COG4774	siderophore transport
DAIF1_RS05220	COG2146	nitrite reductase [NAD(P)H] activity
DAIF1_RS05235	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DAIF1_RS05240	COG0719	Fe-S assembly protein
DAIF1_RS05245	COG0396	ATPase activity
DAIF1_RS05250	COG0719	Fe-S assembly protein
DAIF1_RS05255	COG1959	2 iron, 2 sulfur cluster binding
DAIF1_RS05265	COG0693	protein deglycase activity
DAIF1_RS05290	COG1764	response to oxidative stress
DAIF1_RS05295	COG0384	phenazine biosynthesis protein PhzF
DAIF1_RS05300	COG0384	phenazine biosynthesis protein PhzF
DAIF1_RS05305	COG0527	aspartate kinase activity
DAIF1_RS05315	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DAIF1_RS05330	COG0142	geranyltranstransferase activity
DAIF1_RS05335	COG0366	Alpha amylase catalytic
DAIF1_RS05345	COG1082	Xylose isomerase domain protein TIM barrel
DAIF1_RS05355	COG2190	(PTS) system
DAIF1_RS05355	COG2211	Major facilitator Superfamily
DAIF1_RS05385	COG1131	(ABC) transporter
DAIF1_RS05395	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
DAIF1_RS05400	COG4191	Histidine kinase
DAIF1_RS05400	COG0784	Response regulator, receiver
DAIF1_RS05410	COG0629	single-stranded DNA binding
DAIF1_RS05540	COG2010	Cytochrome c
DAIF1_RS05550	COG0673	inositol 2-dehydrogenase activity
DAIF1_RS05555	COG2211	Major facilitator Superfamily
DAIF1_RS05565	COG1609	Transcriptional regulator
DAIF1_RS05570	COG2259	Doxx family
DAIF1_RS05575	COG0798	PFAM Bile acid sodium symporter
DAIF1_RS05580	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DAIF1_RS05590	COG0431	NADPH-dependent FMN reductase
DAIF1_RS05625	COG0640	Transcriptional regulator
DAIF1_RS05640	COG3655	Transcriptional regulator
DAIF1_RS05645	COG1253	flavin adenine dinucleotide binding
DAIF1_RS05650	COG1408	metallophosphoesterase
DAIF1_RS05680	COG2259	Doxx family
DAIF1_RS05705	COG0477	Major facilitator Superfamily
DAIF1_RS05720	COG1802	Transcriptional regulator
DAIF1_RS05755	COG3052	prosthetic group binding
DAIF1_RS05770	COG0579	oxidoreductase
DAIF1_RS05815	COG3104	oligopeptide transport
DAIF1_RS05825	COG1297	OPT oligopeptide transporter protein
DAIF1_RS05830	COG0823	Involved in the tonB-independent uptake of proteins
DAIF1_RS05830	COG1506	peptidase
DAIF1_RS05845	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
DAIF1_RS05850	COG2894	cell division
DAIF1_RS05865	COG4585	Histidine kinase
DAIF1_RS05870	COG2197	response regulator
DAIF1_RS05890	COG1073	alpha beta
DAIF1_RS05910	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DAIF1_RS05920	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
DAIF1_RS05930	COG1595	DNA-templated transcription, initiation
DAIF1_RS05940	COG1946	Acyl-CoA thioesterase
DAIF1_RS05960	COG0824	Thioesterase
DAIF1_RS05965	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DAIF1_RS05970	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DAIF1_RS05975	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DAIF1_RS05980	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DAIF1_RS05985	COG0268	Binds directly to 16S ribosomal RNA
DAIF1_RS05990	COG0728	peptidoglycan biosynthetic process
DAIF1_RS05995	COG0196	riboflavin kinase activity
DAIF1_RS06000	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DAIF1_RS06010	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DAIF1_RS06035	COG4206	TonB-dependent receptor
DAIF1_RS06055	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DAIF1_RS06065	COG4245	von Willebrand factor, type A
DAIF1_RS06100	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DAIF1_RS06105	COG1845	cytochrome c oxidase, subunit III
DAIF1_RS06110	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DAIF1_RS06125	COG0326	Molecular chaperone. Has ATPase activity
DAIF1_RS06145	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DAIF1_RS06165	COG0228	four-way junction DNA binding
DAIF1_RS06170	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DAIF1_RS06175	COG0336	Belongs to the RNA methyltransferase TrmD family
DAIF1_RS06180	COG0335	large ribosomal subunit rRNA binding
DAIF1_RS06200	COG0534	Mate efflux family protein
DAIF1_RS06215	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
DAIF1_RS06250	COG2831	hemolysin activation secretion protein
DAIF1_RS06270	COG3210	domain, Protein
DAIF1_RS06305	COG0840	transmembrane signaling receptor activity
DAIF1_RS06325	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS06345	COG0024	Methionine aminopeptidase
DAIF1_RS06375	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DAIF1_RS06400	COG1647	Serine aminopeptidase, S33
DAIF1_RS06425	COG2814	Major facilitator Superfamily
DAIF1_RS06430	COG3706	GGDEF domain
DAIF1_RS06445	COG1515	deoxyribonuclease V activity
DAIF1_RS06450	COG0588	phosphoglycerate mutase activity
DAIF1_RS06455	COG3590	peptidase
DAIF1_RS06475	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DAIF1_RS06485	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DAIF1_RS06490	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS06495	COG2205	protein histidine kinase activity
DAIF1_RS06500	COG4452	Inner membrane protein CreD
DAIF1_RS06515	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DAIF1_RS06520	COG0735	belongs to the Fur family
DAIF1_RS06605	COG5002	protein histidine kinase activity
DAIF1_RS06605	COG5001	Diguanylate cyclase
DAIF1_RS06615	COG1187	pseudouridine synthase activity
DAIF1_RS06625	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DAIF1_RS06655	COG1132	(ABC) transporter
DAIF1_RS06720	COG1981	membrane
DAIF1_RS06725	COG0825	malonyl-CoA metabolic process
DAIF1_RS06750	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DAIF1_RS06755	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DAIF1_RS06760	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DAIF1_RS06770	COG0750	zinc metalloprotease
DAIF1_RS06775	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DAIF1_RS06780	COG0575	Belongs to the CDS family
DAIF1_RS06785	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DAIF1_RS06790	COG0233	cytoplasmic translational termination
DAIF1_RS06795	COG0528	UMP kinase activity
DAIF1_RS06805	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DAIF1_RS06810	COG0052	Belongs to the universal ribosomal protein uS2 family
DAIF1_RS06830	COG3188	usher protein
DAIF1_RS06850	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
DAIF1_RS06860	COG1393	Belongs to the ArsC family
DAIF1_RS06865	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DAIF1_RS06875	COG0367	asparagine synthase
DAIF1_RS06880	COG0475	glutathione-regulated potassium exporter activity
DAIF1_RS06885	COG2366	antibiotic biosynthetic process
DAIF1_RS06915	COG1566	PFAM secretion protein HlyD family protein
DAIF1_RS06920	COG2814	Major facilitator Superfamily
DAIF1_RS06930	COG0583	DNA-binding transcription factor activity
DAIF1_RS06950	COG0557	exoribonuclease II activity
DAIF1_RS06960	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DAIF1_RS06965	COG1538	Outer membrane efflux protein
DAIF1_RS06970	COG1136	(ABC) transporter
DAIF1_RS06970	COG0577	efflux transmembrane transporter activity
DAIF1_RS06975	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS06995	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DAIF1_RS07000	COG2259	Doxx family
DAIF1_RS07010	COG3220	belongs to the UPF0276 family
DAIF1_RS07020	COG0704	Plays a role in the regulation of phosphate uptake
DAIF1_RS07030	COG0581	inorganic phosphate transmembrane transporter activity
DAIF1_RS07035	COG0573	inorganic phosphate transmembrane transporter activity
DAIF1_RS07040	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DAIF1_RS07045	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DAIF1_RS07060	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DAIF1_RS07070	COG1024	Enoyl-CoA hydratase
DAIF1_RS07100	COG0116	Belongs to the methyltransferase superfamily
DAIF1_RS07100	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DAIF1_RS07125	COG2733	membrane
DAIF1_RS07135	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DAIF1_RS07140	COG1012	belongs to the aldehyde dehydrogenase family
DAIF1_RS07150	COG0477	Major facilitator Superfamily
DAIF1_RS07155	COG2703	oxygen carrier activity
DAIF1_RS07180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DAIF1_RS07185	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DAIF1_RS07190	COG0174	glutamine synthetase
DAIF1_RS07200	COG2072	flavoprotein involved in K transport
DAIF1_RS07205	COG3842	ATPase activity
DAIF1_RS07210	COG1176	ABC-type spermidine putrescine transport system, permease component I
DAIF1_RS07215	COG1177	transmembrane transport
DAIF1_RS07220	COG1012	belongs to the aldehyde dehydrogenase family
DAIF1_RS07235	COG4535	Mg2 and Co2 transporter CorC
DAIF1_RS07255	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DAIF1_RS07260	COG1702	phosphate starvation-inducible protein PhoH
DAIF1_RS07270	COG1131	(ABC) transporter
DAIF1_RS07275	COG0842	Transport permease protein
DAIF1_RS07280	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DAIF1_RS07295	COG0741	lytic transglycosylase activity
DAIF1_RS07300	COG0723	plastoquinol--plastocyanin reductase activity
DAIF1_RS07305	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DAIF1_RS07310	COG2857	Cytochrome c1
DAIF1_RS07315	COG0625	glutathione transferase activity
DAIF1_RS07320	COG2969	positive regulation of protein catabolic process
DAIF1_RS07355	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DAIF1_RS07360	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DAIF1_RS07365	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS07375	COG1611	Belongs to the LOG family
DAIF1_RS07420	COG0556	nucleotide-excision repair
DAIF1_RS07465	COG3713	MltA-interacting MipA family protein
DAIF1_RS07475	COG2205	protein histidine kinase activity
DAIF1_RS07480	COG2333	competence protein COMEC
DAIF1_RS07480	COG0658	competence protein
DAIF1_RS07485	COG0811	peptide transport
DAIF1_RS07500	COG1663	tetraacyldisaccharide 4'-kinase activity
DAIF1_RS07505	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
DAIF1_RS07510	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DAIF1_RS07520	COG0322	excinuclease ABC activity
DAIF1_RS07560	COG1136	(ABC) transporter
DAIF1_RS07560	COG0577	efflux transmembrane transporter activity
DAIF1_RS07595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DAIF1_RS07615	COG1917	Cupin 2, conserved barrel domain protein
DAIF1_RS07615	COG4977	sequence-specific DNA binding
DAIF1_RS07620	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DAIF1_RS07640	COG0348	domain, Protein
DAIF1_RS07655	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DAIF1_RS07680	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DAIF1_RS07685	COG0069	glutamate synthase activity
DAIF1_RS07710	COG1054	Belongs to the UPF0176 family
DAIF1_RS07715	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DAIF1_RS07730	COG1253	flavin adenine dinucleotide binding
DAIF1_RS07750	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DAIF1_RS07765	COG0504	CTP synthase activity
DAIF1_RS07770	COG2877	3-deoxy-8-phosphooctulonate synthase activity
DAIF1_RS07785	COG0148	phosphopyruvate hydratase activity
DAIF1_RS07790	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DAIF1_RS07795	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DAIF1_RS07800	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DAIF1_RS07810	COG2840	Smr protein MutS2
DAIF1_RS07815	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
DAIF1_RS07820	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DAIF1_RS07840	COG1534	Rna-binding protein
DAIF1_RS07845	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
DAIF1_RS07850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DAIF1_RS07865	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DAIF1_RS07870	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DAIF1_RS07875	COG1923	regulation of RNA biosynthetic process
DAIF1_RS07880	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DAIF1_RS07885	COG1546	Belongs to the CinA family
DAIF1_RS07890	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DAIF1_RS07895	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DAIF1_RS07900	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DAIF1_RS07905	COG2137	regulation of response to DNA damage stimulus
DAIF1_RS07910	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DAIF1_RS07915	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DAIF1_RS07925	COG1201	RNA secondary structure unwinding
DAIF1_RS07935	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DAIF1_RS07940	COG1595	DNA-templated transcription, initiation
DAIF1_RS07955	COG3540	Alkaline phosphatase
DAIF1_RS07970	COG3258	Cytochrome c
DAIF1_RS07985	COG2223	nitrite transmembrane transporter activity
DAIF1_RS08000	COG1741	Belongs to the pirin family
DAIF1_RS08005	COG0583	DNA-binding transcription factor activity
DAIF1_RS08030	COG0351	phosphomethylpyrimidine kinase
DAIF1_RS08030	COG0352	thiamine-phosphate diphosphorylase activity
DAIF1_RS08045	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DAIF1_RS08050	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DAIF1_RS08060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DAIF1_RS08070	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DAIF1_RS08075	COG0477	Major facilitator Superfamily
DAIF1_RS08085	COG0617	tRNA 3'-terminal CCA addition
DAIF1_RS08095	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
DAIF1_RS08100	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DAIF1_RS08110	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
DAIF1_RS08115	COG0166	Belongs to the GPI family
DAIF1_RS08120	COG0166	Belongs to the GPI family
DAIF1_RS08125	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
DAIF1_RS08135	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DAIF1_RS08140	COG0671	phosphoesterase, PA-phosphatase related
DAIF1_RS08150	COG0800	Aldolase
DAIF1_RS08155	COG0129	dihydroxy-acid dehydratase activity
DAIF1_RS08160	COG0363	glucosamine-6-phosphate deaminase activity
DAIF1_RS08165	COG0837	glucose binding
DAIF1_RS08170	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DAIF1_RS08190	COG2009	succinate dehydrogenase
DAIF1_RS08195	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DAIF1_RS08220	COG4591	ABC-type transport system involved in lipoprotein release permease component
DAIF1_RS08235	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
DAIF1_RS08245	COG0552	protein localization to endoplasmic reticulum
DAIF1_RS08270	COG0742	ribosomal rna small subunit methyltransferase
DAIF1_RS08275	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DAIF1_RS08285	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DAIF1_RS08290	COG0405	Gamma-glutamyltransferase
DAIF1_RS08295	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DAIF1_RS08305	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DAIF1_RS08335	COG0415	Belongs to the DNA photolyase family
DAIF1_RS08340	COG2885	chlorophyll binding
DAIF1_RS08345	COG0583	DNA-binding transcription factor activity
DAIF1_RS08620	COG3567	Phage-associated protein, HI1409 family
DAIF1_RS08760	COG0582	viral genome integration into host DNA
DAIF1_RS08785	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DAIF1_RS08795	COG2914	Belongs to the UPF0125 (RnfH) family
DAIF1_RS08800	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DAIF1_RS08805	COG0735	belongs to the Fur family
DAIF1_RS08815	COG0583	DNA-binding transcription factor activity
DAIF1_RS08820	COG0497	DNA recombination
DAIF1_RS08825	COG1420	regulation of RNA biosynthetic process
DAIF1_RS08830	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DAIF1_RS08835	COG0443	Heat shock 70 kDa protein
DAIF1_RS08840	COG0484	heat shock protein binding
DAIF1_RS08855	COG2207	Transcriptional regulator
DAIF1_RS08860	COG2223	nitrite transmembrane transporter activity
DAIF1_RS08870	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
DAIF1_RS08875	COG0287	Prephenate dehydrogenase
DAIF1_RS08875	COG1605	Chorismate mutase
DAIF1_RS08885	COG1132	(ABC) transporter
DAIF1_RS08905	COG5001	Diguanylate cyclase
DAIF1_RS08915	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DAIF1_RS08920	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DAIF1_RS08925	COG0343	queuine tRNA-ribosyltransferase activity
DAIF1_RS08930	COG1862	Preprotein translocase
DAIF1_RS08935	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DAIF1_RS08940	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DAIF1_RS08945	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DAIF1_RS08955	COG2081	HI0933 family
DAIF1_RS08965	COG0564	pseudouridine synthase activity
DAIF1_RS08990	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
DAIF1_RS08995	COG3420	alginic acid biosynthetic process
DAIF1_RS09005	COG0710	3-dehydroquinate dehydratase activity
DAIF1_RS09020	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DAIF1_RS09030	COG3485	protocatechuate 3,4-dioxygenase
DAIF1_RS09035	COG3485	protocatechuate 3,4-dioxygenase
DAIF1_RS09045	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DAIF1_RS09050	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DAIF1_RS09055	COG1414	Transcriptional regulator
DAIF1_RS09065	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DAIF1_RS09070	COG0513	Belongs to the DEAD box helicase family
DAIF1_RS09085	COG0583	DNA-binding transcription factor activity
DAIF1_RS09090	COG0488	(ABC) transporter
DAIF1_RS09115	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS09135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DAIF1_RS09140	COG2957	Belongs to the agmatine deiminase family
DAIF1_RS09150	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DAIF1_RS09155	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DAIF1_RS09165	COG0776	regulation of translation
DAIF1_RS09175	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DAIF1_RS09180	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DAIF1_RS09190	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DAIF1_RS09195	COG0183	Belongs to the thiolase family
DAIF1_RS09200	COG1250	3-hydroxyacyl-CoA dehydrogenase
DAIF1_RS09200	COG1024	Enoyl-CoA hydratase
DAIF1_RS09210	COG0105	UTP biosynthetic process
DAIF1_RS09215	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DAIF1_RS09220	COG0457	Tetratricopeptide repeat
DAIF1_RS09220	COG0859	PFAM glycosyl transferase family 9
DAIF1_RS09225	COG1426	Protein conserved in bacteria
DAIF1_RS09230	COG2976	Protein conserved in bacteria
DAIF1_RS09235	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DAIF1_RS09240	COG1160	GTP binding
DAIF1_RS09250	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DAIF1_RS09255	COG0475	glutathione-regulated potassium exporter activity
DAIF1_RS09255	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DAIF1_RS09260	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DAIF1_RS09275	COG0519	Catalyzes the synthesis of GMP from XMP
DAIF1_RS09275	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DAIF1_RS09310	COG0583	DNA-binding transcription factor activity
DAIF1_RS09335	COG1733	regulation of RNA biosynthetic process
DAIF1_RS09340	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS09360	COG0640	Transcriptional regulator
DAIF1_RS09380	COG4716	Myosin-crossreactive antigen
DAIF1_RS09385	COG0300	oxidoreductase activity
DAIF1_RS09390	COG2207	Transcriptional regulator
DAIF1_RS09420	COG0431	NADPH-dependent FMN reductase
DAIF1_RS09435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DAIF1_RS09440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DAIF1_RS09445	COG1473	amidohydrolase
DAIF1_RS09455	COG1126	abc transporter atp-binding protein
DAIF1_RS09460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DAIF1_RS09525	COG1309	transcriptional regulator
DAIF1_RS09545	COG0697	spore germination
DAIF1_RS09550	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DAIF1_RS09555	COG0167	dihydroorotate dehydrogenase activity
DAIF1_RS09570	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS09575	COG1012	belongs to the aldehyde dehydrogenase family
DAIF1_RS09595	COG0456	acetyltransferase
DAIF1_RS09615	COG0784	Response regulator, receiver
DAIF1_RS09615	COG4191	Histidine kinase
DAIF1_RS09620	COG2205	protein histidine kinase activity
DAIF1_RS09620	COG3437	response regulator, receiver
DAIF1_RS09620	COG3850	Histidine kinase
DAIF1_RS09620	COG4999	Histidine kinase
DAIF1_RS09625	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DAIF1_RS09645	COG0640	Transcriptional regulator
DAIF1_RS09690	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DAIF1_RS09695	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DAIF1_RS09700	COG0124	histidyl-tRNA synthetase
DAIF1_RS09715	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DAIF1_RS09720	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DAIF1_RS09725	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DAIF1_RS09730	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DAIF1_RS09730	COG0131	Imidazoleglycerol-phosphate dehydratase
DAIF1_RS09735	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DAIF1_RS09740	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DAIF1_RS09745	COG0107	imidazoleglycerol-phosphate synthase activity
DAIF1_RS09750	COG0140	phosphoribosyl-ATP diphosphatase activity
DAIF1_RS09750	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DAIF1_RS09765	COG0837	glucose binding
DAIF1_RS09770	COG1446	asparaginase
DAIF1_RS09775	COG3142	Participates in the control of copper homeostasis
DAIF1_RS09790	COG0789	Transcriptional regulator
DAIF1_RS09810	COG3537	Alpha-1,2-mannosidase
DAIF1_RS09815	COG1609	Transcriptional regulator
DAIF1_RS09825	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DAIF1_RS09840	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
DAIF1_RS09845	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
DAIF1_RS09850	COG0235	Class ii aldolase
DAIF1_RS09865	COG0531	amino acid
DAIF1_RS09870	COG0531	amino acid
DAIF1_RS09880	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DAIF1_RS09885	COG0277	FAD linked oxidase domain protein
DAIF1_RS09900	COG5002	protein histidine kinase activity
DAIF1_RS09905	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS09910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS09915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS09935	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DAIF1_RS09960	COG1024	Enoyl-CoA hydratase
DAIF1_RS09970	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DAIF1_RS09970	COG1918	ferrous iron import across plasma membrane
DAIF1_RS09980	COG2249	NAD(P)H dehydrogenase (quinone) activity
DAIF1_RS09985	COG0789	Transcriptional regulator
DAIF1_RS09995	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DAIF1_RS10000	COG0505	Belongs to the CarA family
DAIF1_RS10010	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DAIF1_RS10015	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DAIF1_RS10035	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DAIF1_RS10055	COG3279	Response regulator of the LytR AlgR family
DAIF1_RS10070	COG1012	belongs to the aldehyde dehydrogenase family
DAIF1_RS10090	COG0784	Response regulator, receiver
DAIF1_RS10090	COG2198	Histidine kinase
DAIF1_RS10090	COG2205	protein histidine kinase activity
DAIF1_RS10095	COG1024	Enoyl-CoA hydratase
DAIF1_RS10100	COG0318	PFAM AMP-dependent synthetase and ligase
DAIF1_RS10105	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
DAIF1_RS10110	COG1012	belongs to the aldehyde dehydrogenase family
DAIF1_RS10115	COG1309	transcriptional regulator
DAIF1_RS10120	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DAIF1_RS10165	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
DAIF1_RS10175	COG0840	transmembrane signaling receptor activity
DAIF1_RS10175	COG0840	transmembrane signaling receptor activity
DAIF1_RS10180	COG0840	transmembrane signaling receptor activity
DAIF1_RS10190	COG0835	chemotaxis
DAIF1_RS10195	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
DAIF1_RS10200	COG0840	transmembrane signaling receptor activity
DAIF1_RS10210	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS10220	COG0835	chemotaxis
DAIF1_RS10230	COG1360	Flagellar Motor Protein
DAIF1_RS10235	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DAIF1_RS10240	COG0643	Histidine kinase
DAIF1_RS10240	COG0784	Response regulator, receiver
DAIF1_RS10240	COG2198	Histidine kinase
DAIF1_RS10245	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DAIF1_RS10270	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DAIF1_RS10275	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DAIF1_RS10290	COG1987	bacterial-type flagellum assembly
DAIF1_RS10300	COG3190	flagellar
DAIF1_RS10350	COG1677	Flagellar hook-basal body complex protein FliE
DAIF1_RS10375	COG2197	response regulator
DAIF1_RS10395	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
DAIF1_RS10400	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DAIF1_RS10435	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
DAIF1_RS10445	COG4787	bacterial-type flagellum-dependent cell motility
DAIF1_RS10455	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DAIF1_RS10460	COG1558	bacterial-type flagellum-dependent cell motility
DAIF1_RS10465	COG1815	bacterial-type flagellum-dependent cell motility
DAIF1_RS10470	COG0835	chemotaxis
DAIF1_RS10470	COG0784	Response regulator, receiver
DAIF1_RS10490	COG5002	protein histidine kinase activity
DAIF1_RS10525	COG2915	High frequency lysogenization protein hflD homolog
DAIF1_RS10530	COG0482	sulfurtransferase activity
DAIF1_RS10545	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DAIF1_RS10555	COG0542	response to heat
DAIF1_RS10590	COG0860	N-Acetylmuramoyl-L-alanine amidase
DAIF1_RS10590	COG2247	cell wall binding repeat
DAIF1_RS10605	COG0492	ferredoxin-NADP+ reductase activity
DAIF1_RS10610	COG1674	ftsk spoiiie
DAIF1_RS10625	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DAIF1_RS10640	COG2819	hydrolase of the alpha beta superfamily
DAIF1_RS10650	COG4558	Periplasmic binding protein
DAIF1_RS10655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DAIF1_RS10660	COG1120	ATPase activity
DAIF1_RS10670	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DAIF1_RS10685	COG0784	Response regulator, receiver
DAIF1_RS10685	COG5002	protein histidine kinase activity
DAIF1_RS10760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DAIF1_RS10775	COG2828	Protein conserved in bacteria
DAIF1_RS10780	COG0583	DNA-binding transcription factor activity
DAIF1_RS10805	COG1472	Belongs to the glycosyl hydrolase 3 family
DAIF1_RS10820	COG3661	Belongs to the glycosyl hydrolase 67 family
DAIF1_RS10830	COG1472	Belongs to the glycosyl hydrolase 3 family
DAIF1_RS10835	COG0477	Major facilitator Superfamily
DAIF1_RS10845	COG1070	Carbohydrate kinase
DAIF1_RS10905	COG0431	NADPH-dependent FMN reductase
DAIF1_RS10910	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS10915	COG2205	protein histidine kinase activity
DAIF1_RS10925	COG2194	sulfuric ester hydrolase activity
DAIF1_RS10940	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DAIF1_RS10980	COG2207	Transcriptional regulator
DAIF1_RS10985	COG3459	Glycosyltransferase 36 associated
DAIF1_RS11010	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DAIF1_RS11015	COG0577	efflux transmembrane transporter activity
DAIF1_RS11015	COG1136	(ABC) transporter
DAIF1_RS11020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS11025	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS11030	COG2205	protein histidine kinase activity
DAIF1_RS11050	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DAIF1_RS11060	COG0583	DNA-binding transcription factor activity
DAIF1_RS11065	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DAIF1_RS11070	COG0583	DNA-binding transcription factor activity
DAIF1_RS11095	COG2610	gluconate transmembrane transporter activity
DAIF1_RS11115	COG0642	Histidine kinase
DAIF1_RS11130	COG0318	PFAM AMP-dependent synthetase and ligase
DAIF1_RS11155	COG1902	pentaerythritol trinitrate reductase activity
DAIF1_RS11160	COG4221	oxidoreductase activity
DAIF1_RS11165	COG0604	alcohol dehydrogenase
DAIF1_RS11225	COG3685	Protein conserved in bacteria
DAIF1_RS11270	COG0346	lactoylglutathione lyase activity
DAIF1_RS11280	COG0583	DNA-binding transcription factor activity
DAIF1_RS11320	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
DAIF1_RS11355	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
DAIF1_RS11365	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DAIF1_RS11420	COG2080	2 iron, 2 sulfur cluster binding
DAIF1_RS11425	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DAIF1_RS11430	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DAIF1_RS11440	COG2068	MobA-Related Protein
DAIF1_RS11460	COG2199	diguanylate cyclase activity
DAIF1_RS11465	COG0708	Exodeoxyribonuclease III
DAIF1_RS11470	COG3214	Protein conserved in bacteria
DAIF1_RS11525	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DAIF1_RS11530	COG1285	pathogenesis
DAIF1_RS11535	COG4191	Histidine kinase
DAIF1_RS11540	COG4566	intracellular signal transduction
DAIF1_RS11595	COG0243	molybdopterin cofactor binding
DAIF1_RS11610	COG0477	Major facilitator Superfamily
DAIF1_RS11635	COG1136	(ABC) transporter
DAIF1_RS11650	COG4771	TonB-dependent receptor
DAIF1_RS11660	COG0583	DNA-binding transcription factor activity
DAIF1_RS11665	COG0656	L-ascorbic acid biosynthetic process
DAIF1_RS11690	COG0583	DNA-binding transcription factor activity
DAIF1_RS11695	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS11700	COG3537	Alpha-1,2-mannosidase
DAIF1_RS11715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DAIF1_RS11725	COG0477	Major facilitator Superfamily
DAIF1_RS11770	COG0583	DNA-binding transcription factor activity
DAIF1_RS11780	COG1335	isochorismatase
DAIF1_RS11785	COG1335	isochorismatase
DAIF1_RS11815	COG0811	peptide transport
DAIF1_RS11860	COG1459	type II secretion system
DAIF1_RS11940	COG0840	transmembrane signaling receptor activity
DAIF1_RS11945	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DAIF1_RS11955	COG4149	molybdate abc transporter
DAIF1_RS11965	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DAIF1_RS11980	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DAIF1_RS11985	COG2181	nitrate reductase activity
DAIF1_RS11990	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DAIF1_RS11995	COG1140	nitrate reductase beta subunit
DAIF1_RS12000	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DAIF1_RS12005	COG2223	nitrite transmembrane transporter activity
DAIF1_RS12015	COG0746	molybdenum cofactor guanylyltransferase activity
DAIF1_RS12020	COG0314	molybdopterin synthase activity
DAIF1_RS12030	COG0303	'Molybdopterin
DAIF1_RS12035	COG0521	Mo-molybdopterin cofactor biosynthetic process
DAIF1_RS12035	COG0315	cyclic pyranopterin monophosphate synthase activity
DAIF1_RS12040	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DAIF1_RS12070	COG2207	Transcriptional regulator
DAIF1_RS12085	COG1566	PFAM secretion protein HlyD family protein
DAIF1_RS12100	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
DAIF1_RS12155	COG2885	chlorophyll binding
DAIF1_RS12180	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS12185	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DAIF1_RS12185	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
DAIF1_RS12195	COG1535	isochorismatase
DAIF1_RS12195	COG3433	isochorismatase activity
DAIF1_RS12200	COG1021	2,3-dihydroxybenzoate-AMP ligase
DAIF1_RS12215	COG2409	Drug exporters of the RND superfamily
DAIF1_RS12220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DAIF1_RS12280	COG1914	H( )-stimulated, divalent metal cation uptake system
DAIF1_RS12295	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DAIF1_RS12300	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DAIF1_RS12305	COG3321	synthase
DAIF1_RS12305	COG0604	alcohol dehydrogenase
DAIF1_RS12305	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS12310	COG4206	TonB-dependent receptor
DAIF1_RS12315	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DAIF1_RS12340	COG0583	DNA-binding transcription factor activity
DAIF1_RS12350	COG4772	TonB-dependent receptor
DAIF1_RS12380	COG2885	chlorophyll binding
DAIF1_RS12380	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DAIF1_RS12385	COG5295	Hep Hag repeat protein
DAIF1_RS12415	COG4964	Belongs to the GSP D family
DAIF1_RS12470	COG2814	Major facilitator Superfamily
DAIF1_RS12480	COG1228	amidohydrolase
DAIF1_RS12490	COG1335	isochorismatase
DAIF1_RS12505	COG3850	Histidine kinase
DAIF1_RS12510	COG2197	response regulator
DAIF1_RS12530	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DAIF1_RS12540	COG0583	DNA-binding transcription factor activity
DAIF1_RS12555	COG3161	chorismate lyase activity
DAIF1_RS12595	COG0277	FAD linked oxidase domain protein
DAIF1_RS12600	COG1304	FMN binding
DAIF1_RS12605	COG2186	Transcriptional regulator
DAIF1_RS12615	COG1285	pathogenesis
DAIF1_RS12630	COG2207	Transcriptional regulator
DAIF1_RS12645	COG2814	Major facilitator Superfamily
DAIF1_RS12700	COG0587	DNA-directed DNA polymerase activity
DAIF1_RS12715	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DAIF1_RS12740	COG1595	DNA-templated transcription, initiation
DAIF1_RS12750	COG1629	transport
DAIF1_RS12750	COG4206	TonB-dependent receptor
DAIF1_RS12780	COG0531	amino acid
DAIF1_RS12795	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DAIF1_RS12805	COG0789	Transcriptional regulator
DAIF1_RS12890	COG5001	Diguanylate cyclase
DAIF1_RS12890	COG5002	protein histidine kinase activity
DAIF1_RS12890	COG3447	MASE1 domain protein
DAIF1_RS12895	COG2183	response to ionizing radiation
DAIF1_RS12925	COG3243	poly(R)-hydroxyalkanoic acid synthase
DAIF1_RS12955	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
DAIF1_RS12965	COG0668	transmembrane transport
DAIF1_RS12970	COG1902	pentaerythritol trinitrate reductase activity
DAIF1_RS13085	COG3702	type iv secretory pathway
DAIF1_RS13105	COG2948	multi-organism process
DAIF1_RS13115	COG3736	Type IV secretory pathway, component VirB8
DAIF1_RS13125	COG3505	Type IV secretory pathway VirD4
DAIF1_RS13140	COG2814	Major facilitator Superfamily
DAIF1_RS13175	COG4774	siderophore transport
DAIF1_RS13185	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS13200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS13205	COG0577	efflux transmembrane transporter activity
DAIF1_RS13205	COG1136	(ABC) transporter
DAIF1_RS13250	COG0210	DNA helicase
DAIF1_RS13285	COG4319	ketosteroid isomerase
DAIF1_RS13310	COG0583	DNA-binding transcription factor activity
DAIF1_RS13315	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DAIF1_RS13325	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DAIF1_RS13340	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DAIF1_RS13345	COG0077	Prephenate dehydratase
DAIF1_RS13345	COG1605	Chorismate mutase
DAIF1_RS13350	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DAIF1_RS13385	COG1228	amidohydrolase
DAIF1_RS13400	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
DAIF1_RS13520	COG4993	Dehydrogenase
DAIF1_RS13530	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
DAIF1_RS13540	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
DAIF1_RS13550	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DAIF1_RS13555	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DAIF1_RS13570	COG0359	binds to the 23S rRNA
DAIF1_RS13575	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DAIF1_RS13580	COG0360	Binds together with S18 to 16S ribosomal RNA
DAIF1_RS13595	COG0316	Belongs to the HesB IscA family
DAIF1_RS13600	COG0017	Asparaginyl-tRNA synthetase
DAIF1_RS13615	COG2808	Putative FMN-binding domain
DAIF1_RS13620	COG0288	reversible hydration of carbon dioxide
DAIF1_RS13630	COG3844	kynureninase activity
DAIF1_RS13635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DAIF1_RS13640	COG2925	Exonuclease
DAIF1_RS13650	COG0667	Aldo Keto reductase
DAIF1_RS13670	COG2902	Dehydrogenase
DAIF1_RS13680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS13685	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS13695	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS13710	COG0646	methionine synthase
DAIF1_RS13710	COG1410	methionine synthase
DAIF1_RS13725	COG2900	Belongs to the SlyX family
DAIF1_RS13740	COG0386	Belongs to the glutathione peroxidase family
DAIF1_RS13750	COG1725	Transcriptional regulator
DAIF1_RS13755	COG1131	(ABC) transporter
DAIF1_RS13790	COG2850	peptidyl-arginine hydroxylation
DAIF1_RS13800	COG0567	Dehydrogenase, E1 component
DAIF1_RS13830	COG0305	Participates in initiation and elongation during chromosome replication
DAIF1_RS13850	COG0625	glutathione transferase activity
DAIF1_RS13870	COG0084	hydrolase, TatD family'
DAIF1_RS13875	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DAIF1_RS13895	COG2839	Protein conserved in bacteria
DAIF1_RS13930	COG1595	DNA-templated transcription, initiation
DAIF1_RS13935	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DAIF1_RS13950	COG0386	Belongs to the glutathione peroxidase family
DAIF1_RS13955	COG0339	signal peptide processing
DAIF1_RS13965	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DAIF1_RS13980	COG0705	Rhomboid family
DAIF1_RS13985	COG3104	oligopeptide transport
DAIF1_RS13995	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DAIF1_RS14015	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DAIF1_RS14015	COG0316	Belongs to the HesB IscA family
DAIF1_RS14020	COG2154	pterin-4-alpha-carbinolamine dehydratase
DAIF1_RS14030	COG0428	transporter
DAIF1_RS14040	COG1530	ribonuclease E activity
DAIF1_RS14055	COG0395	ABC-type sugar transport system, permease component
DAIF1_RS14085	COG0271	Belongs to the BolA IbaG family
DAIF1_RS14090	COG2350	Protein conserved in bacteria
DAIF1_RS14095	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DAIF1_RS14100	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DAIF1_RS14105	COG1187	pseudouridine synthase activity
DAIF1_RS14120	COG2814	Major facilitator Superfamily
DAIF1_RS14140	COG0436	Aminotransferase
DAIF1_RS14165	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
DAIF1_RS14180	COG3088	subunit of a heme lyase
DAIF1_RS14180	COG4235	cytochrome complex assembly
DAIF1_RS14190	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DAIF1_RS14200	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DAIF1_RS14205	COG4988	ABC transporter
DAIF1_RS14215	COG1294	oxidase, subunit
DAIF1_RS14245	COG0726	polysaccharide deacetylase
DAIF1_RS14245	COG1649	PFAM Uncharacterised BCR, COG1649
DAIF1_RS14250	COG1215	transferase activity, transferring glycosyl groups
DAIF1_RS14260	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DAIF1_RS14275	COG0165	Argininosuccinate lyase
DAIF1_RS14280	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DAIF1_RS14290	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DAIF1_RS14295	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DAIF1_RS14300	COG0137	argininosuccinate synthase activity
DAIF1_RS14305	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DAIF1_RS14320	COG2166	iron-sulfur cluster assembly
DAIF1_RS14340	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DAIF1_RS14360	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DAIF1_RS14365	COG0402	S-adenosylhomocysteine deaminase activity
DAIF1_RS14375	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DAIF1_RS14380	COG1509	lysine 2,3-aminomutase activity
DAIF1_RS14385	COG5001	Diguanylate cyclase
DAIF1_RS14385	COG3300	MHYT domain
DAIF1_RS14400	COG0483	inositol monophosphate 1-phosphatase activity
DAIF1_RS14405	COG0501	Belongs to the peptidase M48B family
DAIF1_RS14415	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS14435	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DAIF1_RS14445	COG0802	atpase or kinase
DAIF1_RS14450	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DAIF1_RS14450	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DAIF1_RS14455	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DAIF1_RS14460	COG1570	exodeoxyribonuclease VII activity
DAIF1_RS14470	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DAIF1_RS14480	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DAIF1_RS14490	COG4771	TonB-dependent receptor
DAIF1_RS14495	COG1309	transcriptional regulator
DAIF1_RS14520	COG2130	NADP-dependent
DAIF1_RS14545	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS14565	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DAIF1_RS14605	COG2076	Multidrug Resistance protein
DAIF1_RS14615	COG1280	lysine exporter protein (LysE YggA)
DAIF1_RS14625	COG1794	racemase activity, acting on amino acids and derivatives
DAIF1_RS14670	COG0776	regulation of translation
DAIF1_RS14680	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DAIF1_RS14685	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DAIF1_RS14695	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DAIF1_RS14700	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DAIF1_RS14745	COG1185	polyribonucleotide nucleotidyltransferase activity
DAIF1_RS14750	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DAIF1_RS14760	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DAIF1_RS14765	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DAIF1_RS14770	COG0195	Participates in both transcription termination and antitermination
DAIF1_RS14775	COG0779	Required for maturation of 30S ribosomal subunits
DAIF1_RS14790	COG1007	ATP synthesis coupled electron transport
DAIF1_RS14815	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DAIF1_RS14820	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DAIF1_RS14830	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
DAIF1_RS14835	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
DAIF1_RS14840	COG0649	NAD binding
DAIF1_RS14845	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DAIF1_RS14850	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DAIF1_RS14855	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DAIF1_RS14870	COG0149	triose-phosphate isomerase activity
DAIF1_RS14885	COG0438	transferase activity, transferring glycosyl groups
DAIF1_RS14890	COG0726	polysaccharide deacetylase
DAIF1_RS14895	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DAIF1_RS14900	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DAIF1_RS14905	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DAIF1_RS14910	COG0159	tryptophan synthase activity
DAIF1_RS14920	COG0133	tryptophan synthase activity
DAIF1_RS14960	COG0135	phosphoribosylanthranilate isomerase activity
DAIF1_RS14965	COG0101	tRNA pseudouridine synthase activity
DAIF1_RS14980	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DAIF1_RS14990	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DAIF1_RS14995	COG2890	protein-(glutamine-N5) methyltransferase activity
DAIF1_RS15000	COG1999	signal sequence binding
DAIF1_RS15005	COG0688	phosphatidylethanolamine metabolic process
DAIF1_RS15020	COG0433	COG0433 Predicted ATPase
DAIF1_RS15025	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DAIF1_RS15035	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DAIF1_RS15045	COG0412	Dienelactone hydrolase
DAIF1_RS15055	COG0717	Belongs to the dCTP deaminase family
DAIF1_RS15060	COG0489	protein tyrosine kinase activity
DAIF1_RS15065	COG4771	TonB-dependent receptor
DAIF1_RS15070	COG4771	TonB-dependent receptor
DAIF1_RS15075	COG4771	TonB-dependent receptor
DAIF1_RS15085	COG4771	TonB-dependent receptor
DAIF1_RS15090	COG4771	TonB-dependent receptor
DAIF1_RS15095	COG3590	peptidase
DAIF1_RS15130	COG0697	spore germination
DAIF1_RS15140	COG2311	Membrane
DAIF1_RS15145	COG1047	Peptidyl-prolyl cis-trans
DAIF1_RS15150	COG0791	NLP P60 protein
DAIF1_RS15155	COG0791	NLP P60 protein
DAIF1_RS15195	COG1301	dicarboxylic acid transport
DAIF1_RS15215	COG1722	exodeoxyribonuclease VII activity
DAIF1_RS15220	COG0142	geranyltranstransferase activity
DAIF1_RS15230	COG0312	modulator of DNA gyrase
DAIF1_RS15235	COG3028	Belongs to the UPF0307 family
DAIF1_RS15240	COG0312	modulator of DNA gyrase
DAIF1_RS15260	COG2968	Membrane
DAIF1_RS15270	COG4771	TonB-dependent receptor
DAIF1_RS15280	COG2755	lipolytic protein G-D-S-L family
DAIF1_RS15280	COG0657	acetylesterase activity
DAIF1_RS15290	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DAIF1_RS15300	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DAIF1_RS15315	COG0495	leucyl-tRNA aminoacylation
DAIF1_RS15325	COG3118	belongs to the thioredoxin family
DAIF1_RS15335	COG4251	negative regulation of phosphorylation
DAIF1_RS15335	COG2203	Gaf domain
DAIF1_RS15335	COG5001	Diguanylate cyclase
DAIF1_RS15335	COG3706	GGDEF domain
DAIF1_RS15360	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DAIF1_RS15375	COG0346	lactoylglutathione lyase activity
DAIF1_RS15385	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DAIF1_RS15385	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DAIF1_RS15395	COG2878	Part of a membrane complex involved in electron transport
DAIF1_RS15410	COG0251	oxidation-reduction process
DAIF1_RS15415	COG0392	lysyltransferase activity
DAIF1_RS15415	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DAIF1_RS15445	COG2824	Alkylphosphonate utilization operon protein PhnA
DAIF1_RS15450	COG0443	Heat shock 70 kDa protein
DAIF1_RS15490	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DAIF1_RS15495	COG3122	Protein conserved in bacteria
DAIF1_RS15500	COG1451	nucleotide metabolic process
DAIF1_RS15510	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DAIF1_RS15530	COG0183	Belongs to the thiolase family
DAIF1_RS15545	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS15555	COG1793	dna ligase
DAIF1_RS15560	COG1201	RNA secondary structure unwinding
DAIF1_RS15575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DAIF1_RS15580	COG1278	Cold shock
DAIF1_RS15585	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DAIF1_RS15590	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DAIF1_RS15595	COG1472	Belongs to the glycosyl hydrolase 3 family
DAIF1_RS15600	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DAIF1_RS15605	COG2954	triphosphatase activity
DAIF1_RS15615	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DAIF1_RS15620	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS15625	COG1381	Involved in DNA repair and RecF pathway recombination
DAIF1_RS15630	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DAIF1_RS15645	COG0681	Belongs to the peptidase S26 family
DAIF1_RS15650	COG0481	GTPase activity
DAIF1_RS15655	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DAIF1_RS15670	COG1250	3-hydroxyacyl-CoA dehydrogenase
DAIF1_RS15670	COG1024	Enoyl-CoA hydratase
DAIF1_RS15675	COG1741	Belongs to the pirin family
DAIF1_RS15680	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DAIF1_RS15690	COG1741	Belongs to the pirin family
DAIF1_RS15700	COG1966	Carbon starvation protein
DAIF1_RS15705	COG2879	small protein
DAIF1_RS15725	COG2205	protein histidine kinase activity
DAIF1_RS15730	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS15735	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DAIF1_RS15765	COG2814	Major facilitator Superfamily
DAIF1_RS15770	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DAIF1_RS15770	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DAIF1_RS15780	COG1113	amino acid transport
DAIF1_RS15785	COG1917	Cupin 2, conserved barrel domain protein
DAIF1_RS15785	COG2207	Transcriptional regulator
DAIF1_RS15790	COG0753	catalase activity
DAIF1_RS15820	COG1376	ErfK ybiS ycfS ynhG family protein
DAIF1_RS15825	COG0739	heme binding
DAIF1_RS15835	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DAIF1_RS15845	COG0330	HflC and HflK could
DAIF1_RS15850	COG0330	HflC and HflK could
DAIF1_RS15855	COG0604	alcohol dehydrogenase
DAIF1_RS15880	COG4953	penicillin-binding protein 1C
DAIF1_RS15885	COG2373	Large extracellular alpha-helical protein
DAIF1_RS15890	COG2079	MmgE PrpD family protein
DAIF1_RS15895	COG2828	Protein conserved in bacteria
DAIF1_RS15920	COG3829	transcription factor binding
DAIF1_RS15950	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DAIF1_RS15970	COG0477	Major facilitator Superfamily
DAIF1_RS15985	COG0784	Response regulator, receiver
DAIF1_RS15985	COG2198	Histidine kinase
DAIF1_RS15985	COG2205	protein histidine kinase activity
DAIF1_RS15995	COG3038	cytochrome b561
DAIF1_RS16010	COG1760	l-serine dehydratase
DAIF1_RS16015	COG0596	Alpha beta hydrolase
DAIF1_RS16020	COG0527	aspartate kinase activity
DAIF1_RS16020	COG0460	homoserine dehydrogenase
DAIF1_RS16025	COG0626	cystathionine gamma-synthase activity
DAIF1_RS16030	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DAIF1_RS16035	COG0739	heme binding
DAIF1_RS16040	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DAIF1_RS16045	COG1272	protein, Hemolysin III
DAIF1_RS16050	COG2982	Protein involved in outer membrane biogenesis
DAIF1_RS16060	COG0463	Glycosyl transferase, family 2
DAIF1_RS16070	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DAIF1_RS16080	COG4771	TonB-dependent receptor
DAIF1_RS16085	COG1309	transcriptional regulator
DAIF1_RS16095	COG1960	acyl-CoA dehydrogenase activity
DAIF1_RS16125	COG0583	DNA-binding transcription factor activity
DAIF1_RS16140	COG0509	glycine decarboxylation via glycine cleavage system
DAIF1_RS16145	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DAIF1_RS16155	COG0330	HflC and HflK could
DAIF1_RS16160	COG2186	Transcriptional regulator
DAIF1_RS16180	COG2271	Major facilitator Superfamily
DAIF1_RS16200	COG1742	UPF0060 membrane protein
DAIF1_RS16205	COG3956	TIGRFAM MazG family protein
DAIF1_RS16210	COG1218	3'(2'),5'-bisphosphate nucleotidase
DAIF1_RS16215	COG0494	nUDIX hydrolase
DAIF1_RS16225	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DAIF1_RS16240	COG2198	Histidine kinase
DAIF1_RS16240	COG0784	Response regulator, receiver
DAIF1_RS16240	COG0643	Histidine kinase
DAIF1_RS16245	COG0840	transmembrane signaling receptor activity
DAIF1_RS16250	COG0835	chemotaxis
DAIF1_RS16265	COG0189	ligase activity
DAIF1_RS16280	COG1199	ATP-dependent helicase activity
DAIF1_RS16290	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DAIF1_RS16295	COG1216	Glycosyl transferase, family 2
DAIF1_RS16295	COG1442	glycosyl transferase family 8
DAIF1_RS16305	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DAIF1_RS16315	COG1643	Atp-dependent helicase
DAIF1_RS16320	COG0783	Belongs to the Dps family
DAIF1_RS16325	COG0514	ATP-dependent DNA helicase (RecQ)
DAIF1_RS16335	COG2132	Multicopper oxidase
DAIF1_RS16420	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DAIF1_RS16425	COG0602	queuosine metabolic process
DAIF1_RS16435	COG2885	chlorophyll binding
DAIF1_RS16440	COG0823	Involved in the tonB-independent uptake of proteins
DAIF1_RS16460	COG0824	Thioesterase
DAIF1_RS16465	COG2255	four-way junction helicase activity
DAIF1_RS16480	COG0632	four-way junction helicase activity
DAIF1_RS16485	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DAIF1_RS16490	COG0217	transcriptional regulatory protein
DAIF1_RS16510	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DAIF1_RS16530	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
DAIF1_RS16545	COG0488	(ABC) transporter
DAIF1_RS16555	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DAIF1_RS16555	COG4651	solute:proton antiporter activity
DAIF1_RS16570	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS16575	COG2205	protein histidine kinase activity
DAIF1_RS16585	COG0542	response to heat
DAIF1_RS16605	COG0028	Belongs to the TPP enzyme family
DAIF1_RS16630	COG3387	PFAM Glycoside hydrolase 15-related
DAIF1_RS16635	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
DAIF1_RS16650	COG0564	pseudouridine synthase activity
DAIF1_RS16655	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DAIF1_RS16665	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DAIF1_RS16665	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DAIF1_RS16670	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DAIF1_RS16675	COG0045	succinate-CoA ligase (ADP-forming) activity
DAIF1_RS16710	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DAIF1_RS16730	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS16745	COG0189	ligase activity
DAIF1_RS16775	COG2022	thiamine diphosphate biosynthetic process
DAIF1_RS16780	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DAIF1_RS16785	COG3273	potassium ion transport
DAIF1_RS16785	COG0471	metal ion transport
DAIF1_RS16805	COG1970	mechanosensitive ion channel activity
DAIF1_RS16815	COG1115	amino acid carrier protein
DAIF1_RS16825	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DAIF1_RS16830	COG1115	amino acid carrier protein
DAIF1_RS16840	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS16860	COG0583	DNA-binding transcription factor activity
DAIF1_RS16870	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DAIF1_RS16880	COG3588	fructose-bisphosphate aldolase
DAIF1_RS16885	COG0469	pyruvate kinase activity
DAIF1_RS16895	COG0126	phosphoglycerate kinase activity
DAIF1_RS16910	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DAIF1_RS16915	COG3047	cAMP biosynthetic process
DAIF1_RS16960	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DAIF1_RS16965	COG1301	dicarboxylic acid transport
DAIF1_RS16975	COG2304	oxidoreductase activity
DAIF1_RS16995	COG0714	Associated with various cellular activities
DAIF1_RS17025	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DAIF1_RS17095	COG0254	rRNA binding
DAIF1_RS17105	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DAIF1_RS17115	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DAIF1_RS17120	COG1758	RNA polymerase activity
DAIF1_RS17130	COG1561	YicC-like family, N-terminal region
DAIF1_RS17135	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DAIF1_RS17140	COG0346	lactoylglutathione lyase activity
DAIF1_RS17155	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DAIF1_RS17170	COG0006	proline dipeptidase activity
DAIF1_RS17175	COG0006	proline dipeptidase activity
DAIF1_RS17180	COG3079	Belongs to the UPF0149 family
DAIF1_RS17200	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DAIF1_RS17210	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DAIF1_RS17220	COG2912	Transglutaminase-like superfamily
DAIF1_RS17225	COG1773	rubredoxin
DAIF1_RS17235	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DAIF1_RS17240	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
DAIF1_RS17250	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DAIF1_RS17255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DAIF1_RS17260	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS17280	COG0671	phosphoesterase, PA-phosphatase related
DAIF1_RS17290	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DAIF1_RS17295	COG0563	adenylate kinase activity
DAIF1_RS17315	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
DAIF1_RS17325	COG0848	biopolymer transport protein
DAIF1_RS17335	COG2832	Protein of unknown function (DUF454)
DAIF1_RS17375	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DAIF1_RS17385	COG4771	TonB-dependent receptor
DAIF1_RS17395	COG0745	RESPONSE REGULATOR receiver
DAIF1_RS17405	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DAIF1_RS17410	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DAIF1_RS17415	COG0405	Gamma-glutamyltransferase
DAIF1_RS17420	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DAIF1_RS17440	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DAIF1_RS17445	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DAIF1_RS17460	COG0473	3-isopropylmalate dehydrogenase activity
DAIF1_RS17480	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS17495	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DAIF1_RS17500	COG1538	Outer membrane efflux protein
DAIF1_RS17510	COG1519	Transferase
DAIF1_RS17515	COG1560	Kdo2-lipid A biosynthetic process
DAIF1_RS17555	COG1301	dicarboxylic acid transport
DAIF1_RS17565	COG4191	Histidine kinase
DAIF1_RS17580	COG0642	Histidine kinase
DAIF1_RS17595	COG2851	Citrate transporter
DAIF1_RS17600	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS17615	COG1162	GTPase activity
DAIF1_RS17635	COG0726	polysaccharide deacetylase
DAIF1_RS17640	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DAIF1_RS17655	COG1228	amidohydrolase
DAIF1_RS17660	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DAIF1_RS17670	COG1307	EDD domain protein, DegV family
DAIF1_RS17710	COG5001	Diguanylate cyclase
DAIF1_RS17710	COG4251	negative regulation of phosphorylation
DAIF1_RS17710	COG3706	GGDEF domain
DAIF1_RS17710	COG2203	Gaf domain
DAIF1_RS17720	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
DAIF1_RS17725	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
DAIF1_RS17735	COG0583	DNA-binding transcription factor activity
DAIF1_RS17740	COG1902	pentaerythritol trinitrate reductase activity
DAIF1_RS17760	COG0583	DNA-binding transcription factor activity
DAIF1_RS17765	COG1064	alcohol dehydrogenase
DAIF1_RS17790	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DAIF1_RS17795	COG0218	Necessary for normal cell division and for the maintenance of normal septation
DAIF1_RS17810	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DAIF1_RS17825	COG1522	sequence-specific DNA binding
DAIF1_RS17855	COG0617	tRNA 3'-terminal CCA addition
DAIF1_RS17890	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DAIF1_RS17895	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DAIF1_RS17900	COG1609	Transcriptional regulator
DAIF1_RS17910	COG0837	glucose binding
DAIF1_RS17920	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DAIF1_RS17940	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DAIF1_RS17955	COG0784	Response regulator, receiver
DAIF1_RS17960	COG4251	negative regulation of phosphorylation
DAIF1_RS17965	COG2823	Periplasmic or secreted lipoprotein
DAIF1_RS17970	COG0673	inositol 2-dehydrogenase activity
DAIF1_RS17975	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DAIF1_RS17995	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DAIF1_RS18005	COG2921	Belongs to the UPF0250 family
DAIF1_RS18015	COG1686	Belongs to the peptidase S11 family
DAIF1_RS18025	COG2951	lytic endotransglycosylase activity
DAIF1_RS18035	COG0772	Belongs to the SEDS family
DAIF1_RS18045	COG0772	Belongs to the SEDS family
DAIF1_RS18060	COG1792	Involved in formation and maintenance of cell shape
DAIF1_RS18065	COG1077	Cell shape determining protein MreB Mrl
DAIF1_RS18070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DAIF1_RS18075	COG1368	sulfuric ester hydrolase activity
DAIF1_RS18080	COG0546	phosphoglycolate phosphatase activity
DAIF1_RS18100	COG0308	aminopeptidase N
DAIF1_RS18105	COG2226	methyltransferase
DAIF1_RS18135	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS18140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS18155	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DAIF1_RS18175	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DAIF1_RS18185	COG2832	Protein of unknown function (DUF454)
DAIF1_RS18195	COG0436	Aminotransferase
DAIF1_RS18200	COG1505	serine-type exopeptidase activity
DAIF1_RS18215	COG2011	ABC-type metal ion transport system permease component
DAIF1_RS18220	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DAIF1_RS18225	COG0697	spore germination
DAIF1_RS18230	COG1666	GTP binding
DAIF1_RS18260	COG0339	signal peptide processing
DAIF1_RS18270	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DAIF1_RS18290	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DAIF1_RS18300	COG1136	(ABC) transporter
DAIF1_RS18310	COG1136	(ABC) transporter
DAIF1_RS18310	COG0577	efflux transmembrane transporter activity
DAIF1_RS18320	COG2204	response regulator
DAIF1_RS18325	COG4191	Histidine kinase
DAIF1_RS18335	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DAIF1_RS18345	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DAIF1_RS18350	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DAIF1_RS18355	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DAIF1_RS18360	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DAIF1_RS18365	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DAIF1_RS18370	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DAIF1_RS18380	COG0356	it plays a direct role in the translocation of protons across the membrane
DAIF1_RS18395	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DAIF1_RS18400	COG0508	dehydrogenase complex catalyzes the overall conversion of
DAIF1_RS18420	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DAIF1_RS18445	COG0181	hydroxymethylbilane synthase activity
DAIF1_RS18455	COG3275	phosphorelay sensor kinase activity
DAIF1_RS18460	COG0400	carboxylic ester hydrolase activity
DAIF1_RS18470	COG4771	TonB-dependent receptor
DAIF1_RS18480	COG0840	transmembrane signaling receptor activity
DAIF1_RS18515	COG0583	DNA-binding transcription factor activity
DAIF1_RS18530	COG1764	response to oxidative stress
DAIF1_RS18540	COG0583	DNA-binding transcription factor activity
DAIF1_RS18560	COG1595	DNA-templated transcription, initiation
DAIF1_RS18570	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DAIF1_RS18610	COG0625	glutathione transferase activity
DAIF1_RS18620	COG1733	regulation of RNA biosynthetic process
DAIF1_RS18660	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DAIF1_RS18710	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DAIF1_RS18715	COG1490	D-aminoacyl-tRNA deacylase activity
DAIF1_RS18755	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DAIF1_RS18760	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DAIF1_RS18760	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DAIF1_RS18765	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DAIF1_RS18770	COG0242	peptide deformylase activity
DAIF1_RS18775	COG1652	LysM domain
DAIF1_RS18780	COG0758	DNA mediated transformation
DAIF1_RS18785	COG2922	Belongs to the Smg family
DAIF1_RS18795	COG1714	RDD family
DAIF1_RS18800	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DAIF1_RS18800	COG1754	DNA topoisomerase type I activity
DAIF1_RS18805	COG0009	L-threonylcarbamoyladenylate synthase
DAIF1_RS18830	COG0616	signal peptide processing
DAIF1_RS18835	COG0534	Mate efflux family protein
DAIF1_RS18850	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DAIF1_RS18855	COG0625	glutathione transferase activity
DAIF1_RS18870	COG1252	NADH dehydrogenase
DAIF1_RS18890	COG2860	membrane
DAIF1_RS18900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS18905	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DAIF1_RS18910	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DAIF1_RS18925	COG1846	Transcriptional regulator
DAIF1_RS18935	COG0459	protein refolding
DAIF1_RS18940	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DAIF1_RS18945	COG2356	endonuclease I
DAIF1_RS18950	COG1324	tolerance protein
DAIF1_RS18960	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DAIF1_RS18970	COG0840	transmembrane signaling receptor activity
DAIF1_RS18990	COG0583	DNA-binding transcription factor activity
DAIF1_RS19005	COG1686	Belongs to the peptidase S11 family
DAIF1_RS19020	COG2249	NAD(P)H dehydrogenase (quinone) activity
DAIF1_RS19040	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
DAIF1_RS19050	COG0511	ligase activity, forming carbon-carbon bonds
DAIF1_RS19055	COG0439	Biotin carboxylase
DAIF1_RS19070	COG2264	protein methyltransferase activity
DAIF1_RS19080	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DAIF1_RS19085	COG4589	Belongs to the CDS family
DAIF1_RS19100	COG2453	phosphatase
DAIF1_RS19100	COG0671	phosphoesterase, PA-phosphatase related
DAIF1_RS19105	COG2267	carboxylic ester hydrolase activity
DAIF1_RS19110	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DAIF1_RS19115	COG0138	bifunctional purine biosynthesis protein purh
DAIF1_RS19125	COG0151	Belongs to the GarS family
DAIF1_RS19130	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DAIF1_RS19135	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DAIF1_RS19140	COG2201	protein-glutamate methylesterase activity
DAIF1_RS19145	COG2177	Part of the ABC transporter FtsEX involved in
DAIF1_RS19150	COG2884	Cell division ATP-binding protein ftsE
DAIF1_RS19160	COG3118	belongs to the thioredoxin family
DAIF1_RS19165	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DAIF1_RS19170	COG3706	GGDEF domain
DAIF1_RS19180	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
DAIF1_RS19220	COG1652	LysM domain
DAIF1_RS19225	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DAIF1_RS19225	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DAIF1_RS19230	COG1473	amidohydrolase
DAIF1_RS19235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DAIF1_RS19255	COG1289	transmembrane transporter activity
DAIF1_RS19260	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS19295	COG0316	Belongs to the HesB IscA family
DAIF1_RS19340	COG1051	belongs to the nudix hydrolase family
DAIF1_RS19355	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DAIF1_RS19360	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DAIF1_RS19365	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
DAIF1_RS19375	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DAIF1_RS19380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DAIF1_RS19385	COG0730	response to heat
DAIF1_RS19395	COG0134	indole-3-glycerol-phosphate synthase activity
DAIF1_RS19400	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DAIF1_RS19415	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DAIF1_RS19430	COG1597	lipid kinase activity
DAIF1_RS19450	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DAIF1_RS19455	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DAIF1_RS19465	COG2111	Na H antiporter
DAIF1_RS19465	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DAIF1_RS19470	COG1006	Multisubunit Na H antiporter MnhC subunit
DAIF1_RS19475	COG0651	ATP synthesis coupled electron transport
DAIF1_RS19480	COG1863	multisubunit Na H antiporter MnhE subunit
DAIF1_RS19485	COG2212	antiporter activity
DAIF1_RS19490	COG1320	monovalent cation:proton antiporter activity
DAIF1_RS19510	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
DAIF1_RS19530	COG4804	nuclease activity
DAIF1_RS19545	COG3104	oligopeptide transport
DAIF1_RS19550	COG3483	tryptophan 2,3-dioxygenase activity
DAIF1_RS19555	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DAIF1_RS19580	COG2378	regulation of single-species biofilm formation
DAIF1_RS19595	COG2354	Protein conserved in bacteria
DAIF1_RS19605	COG1368	sulfuric ester hydrolase activity
DAIF1_RS19615	COG3264	Mechanosensitive ion channel
DAIF1_RS19615	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
DAIF1_RS19630	COG0723	plastoquinol--plastocyanin reductase activity
DAIF1_RS19630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DAIF1_RS19645	COG3212	peptidase
DAIF1_RS19665	COG1166	arginine decarboxylase activity
DAIF1_RS19670	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DAIF1_RS19685	COG0347	Belongs to the P(II) protein family
DAIF1_RS19690	COG2960	long-chain fatty acid transporting porin activity
DAIF1_RS19700	COG3209	COG3209 Rhs family protein
DAIF1_RS19730	COG1136	(ABC) transporter
DAIF1_RS19730	COG0577	efflux transmembrane transporter activity
DAIF1_RS19765	COG0606	chelatase, subunit chli
DAIF1_RS19795	COG0561	phosphatase activity
DAIF1_RS19800	COG3932	Exopolysaccharide synthesis, ExoD
DAIF1_RS19835	COG1999	signal sequence binding
DAIF1_RS19840	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DAIF1_RS19845	COG1845	cytochrome c oxidase, subunit III
DAIF1_RS19855	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DAIF1_RS19860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DAIF1_RS19875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DAIF1_RS19880	COG1104	cysteine desulfurase activity
DAIF1_RS19910	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DAIF1_RS19930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DAIF1_RS19935	COG2031	fatty acid transporter
DAIF1_RS19960	COG0673	inositol 2-dehydrogenase activity
DAIF1_RS19970	COG1501	Belongs to the glycosyl hydrolase 31 family
DAIF1_RS19975	COG2222	sugar isomerase
DAIF1_RS19980	COG1940	carbohydrate kinase activity
DAIF1_RS19990	COG1349	DNA-binding transcription factor activity
DAIF1_RS19995	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DAIF1_RS20000	COG2814	Major facilitator Superfamily
DAIF1_RS20045	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DAIF1_RS20050	COG0156	8-amino-7-oxononanoate synthase activity
DAIF1_RS20055	COG2267	carboxylic ester hydrolase activity
DAIF1_RS20060	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS20075	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DAIF1_RS20095	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DAIF1_RS20120	COG0714	Associated with various cellular activities
DAIF1_RS20135	COG0754	glutathionylspermidine amidase activity
DAIF1_RS20150	COG0129	dihydroxy-acid dehydratase activity
DAIF1_RS20160	COG1199	ATP-dependent helicase activity
DAIF1_RS20170	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DAIF1_RS20190	COG3781	membrane
DAIF1_RS20220	COG0625	glutathione transferase activity
DAIF1_RS20240	COG2207	Transcriptional regulator
DAIF1_RS20250	COG4555	ABC transporter
DAIF1_RS20285	COG1131	(ABC) transporter
DAIF1_RS20290	COG0842	Transport permease protein
DAIF1_RS20300	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DAIF1_RS20310	COG0084	hydrolase, TatD family'
DAIF1_RS20315	COG1643	Atp-dependent helicase
DAIF1_RS20325	COG1187	pseudouridine synthase activity
DAIF1_RS20335	COG0667	Aldo Keto reductase
DAIF1_RS20355	COG0583	DNA-binding transcription factor activity
DAIF1_RS20360	COG2814	Major facilitator Superfamily
DAIF1_RS20370	COG2205	protein histidine kinase activity
DAIF1_RS20370	COG2198	Histidine kinase
DAIF1_RS20370	COG0784	Response regulator, receiver
DAIF1_RS20385	COG2267	carboxylic ester hydrolase activity
DAIF1_RS20390	COG0393	Putative heavy-metal-binding
DAIF1_RS20395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DAIF1_RS20395	COG1042	CoA-binding domain protein
DAIF1_RS20395	COG0045	succinate-CoA ligase (ADP-forming) activity
DAIF1_RS20400	COG2239	Acts as a magnesium transporter
DAIF1_RS20415	COG3177	Filamentation induced by cAMP protein fic
DAIF1_RS20415	COG0666	response to abiotic stimulus
DAIF1_RS20420	COG3100	YcgL domain-containing protein
DAIF1_RS20435	COG1028	Short-chain dehydrogenase reductase Sdr
DAIF1_RS20455	COG0644	oxidoreductase
DAIF1_RS20475	COG2986	histidine ammonia-lyase
DAIF1_RS20485	COG0463	Glycosyl transferase, family 2
DAIF1_RS20490	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DAIF1_RS20500	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DAIF1_RS20505	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DAIF1_RS20520	COG1294	oxidase, subunit
DAIF1_RS20525	COG1271	oxidase subunit
DAIF1_RS20535	COG1595	DNA-templated transcription, initiation
DAIF1_RS20570	COG0408	coproporphyrinogen oxidase activity
DAIF1_RS20575	COG2323	membrane
DAIF1_RS20590	COG0589	response to stress
DAIF1_RS20600	COG1690	Belongs to the RtcB family
DAIF1_RS20610	COG4650	regulator
DAIF1_RS20630	COG0210	DNA helicase
DAIF1_RS20640	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DAIF1_RS20645	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DAIF1_RS20650	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DAIF1_RS20660	COG1819	glycosyl
DAIF1_RS20670	COG0251	oxidation-reduction process
DAIF1_RS20705	COG0463	Glycosyl transferase, family 2
DAIF1_RS20720	COG1475	DNA binding
DAIF1_RS20725	COG1192	Involved in chromosome partitioning
DAIF1_RS20730	COG0357	Ribosomal RNA small subunit methyltransferase G
DAIF1_RS20735	COG2091	lysine biosynthetic process via aminoadipic acid
DAIF1_RS20775	COG1971	Probably functions as a manganese efflux pump
DAIF1_RS20780	COG2205	protein histidine kinase activity
DAIF1_RS20780	COG0784	Response regulator, receiver
DAIF1_RS20795	COG2911	Protein conserved in bacteria
DAIF1_RS20800	COG0729	surface antigen
DAIF1_RS20810	COG0752	glycyl-tRNA synthetase alpha subunit
DAIF1_RS20815	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DAIF1_RS20820	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DAIF1_RS20820	COG0519	Catalyzes the synthesis of GMP from XMP
DAIF1_RS20830	COG0805	protein transport
DAIF1_RS20840	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DAIF1_RS20850	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
DAIF1_RS20860	COG0840	transmembrane signaling receptor activity
DAIF1_RS20915	COG3135	benzoate transporter
DAIF1_RS20930	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
DAIF1_RS20935	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DAIF1_RS20970	COG0302	gtp cyclohydrolase
DAIF1_RS20985	COG1566	PFAM secretion protein HlyD family protein
DAIF1_RS20995	COG1289	transmembrane transporter activity
DAIF1_RS21010	COG1074	ATP-dependent DNA helicase activity
DAIF1_RS21015	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DAIF1_RS21020	COG1127	ABC transporter
DAIF1_RS21025	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DAIF1_RS21030	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DAIF1_RS21045	COG2853	Lipoprotein
DAIF1_RS21050	COG0386	Belongs to the glutathione peroxidase family
DAIF1_RS21060	COG1322	Protein conserved in bacteria
DAIF1_RS21075	COG0583	DNA-binding transcription factor activity
DAIF1_RS21090	COG0667	Aldo Keto reductase
DAIF1_RS21100	COG0531	amino acid
DAIF1_RS21120	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DAIF1_RS21125	COG0861	Integral membrane protein TerC family
DAIF1_RS21135	COG0584	glycerophosphoryl diester phosphodiesterase
DAIF1_RS21155	COG0706	membrane insertase activity
DAIF1_RS21160	COG0594	ribonuclease P activity
DAIF1_RS21165	COG0230	Belongs to the bacterial ribosomal protein bL34 family