LQ332_RS00020 NONE
LQ332_RS00025 NONE
LQ332_RS00030    4390 ..    4443 + -17.6  -3.14132   GATCAGCCCGCGTTG GCCGATGCCG-GTGCCGGT-GCCGACA TGA TGTCGGCCATCGGCAGGCGGCG-CGGC TTGCTCGGGAACGCG  88 44
        fabR    7349 ..    7383 +  -7.7  -2.64155   GCACCCCCGCCGCAT    TCC-GCCGCGGCTGAC AATC GGCCGCCGGGGCCGGA     TCCCTTTCCACAGGA  50 12
LQ332_RS00055    9422 ..    9445 + -11.8  -3.56643   CGGTCCTGCCCCAGT          GGA-TCCACGC CAT GCGTGGATTCC          TTTACACGGTGTGGG  77 57
LQ332_RS00080   15273 ..   15316 + -13.1  -3.34013   GCAAAGGGATCTGAC CCGCGCGAGCGGGTGCGG-GC CAGA GCTCCGCGCCC-CTCGCACCG TTCGTTAAGAACCTG  77 75
LQ332_RS00085   18451 ..   18509 + -11.7  -3.70902   CAGGTCGTAATCCTG GCTCCGCCCCGTCCGCGGTAGAGTCGACT GTC AGTCGACTC-GC-GCGCGCAGCGCGGACC TTTCGATGTGCGCAA  77 424
LQ332_RS00110   22938 ..   22962 +  -5.6  -2.70932   TGAGGTAGTGCCGGC         CGCTGG-CCGG CAAT CCGGTCTCGCG          TGGTTGCCGGCCAGC  46 38
LQ332_RS00120   26685 ..   26732 + -21.4  -3.36515   GCCCGATGCAGTGAC GGTGGCGATCACGGTGGCGGCGT ATG ATGCCGCCACCATG-TCGCTGCC TGTTTCGCCATCGCG 100 51
LQ332_RS00125   28558 ..   28578 +  -5.3  -2.66733   GATCGACATCCCGGA            TATCCACGC ATG GCGTGGAGC            TACTGTCACTTCGAC  44 89
LQ332_RS00130   29343 ..   29360 +  -5.5  -3.53012   TCAACCGCCCATCCG             CTGCTGC GCGC GCAACAG              TTTCCGGAACGAACC  55 42
LQ332_RS00140   30821 ..   30838 + -12.7  -3.15544   CTGGGCCCGGCCGCT             GCGCAGG CACG CCTGCGC              TTCCTGCAGCTGGGC  68 223
LQ332_RS00165 NONE
LQ332_RS00170 NONE
LQ332_RS00175 NONE
        cpaB NONE
LQ332_RS00185 NONE
LQ332_RS00190 NONE
LQ332_RS00195 NONE
LQ332_RS00200 NONE
LQ332_RS00205 NONE
LQ332_RS00210 NONE
LQ332_RS00215 NONE
LQ332_RS00220   51923 ..   51934 +  -2.2  -2.79796   CGATCCAGTGCAGCG                CC-GC ACA GCTGG                TCTACTGAAATCGAG  40 6
LQ332_RS00225   52777 ..   52800 +   -16  -3.91984   TCACGGCATTGCACA          CGACGGCGCC CCAG GGCGCCGTTG           TTGTTTCCGGCATGT  93 50
LQ332_RS00235   54550 ..   54575 + -23.3  -3.69395   CGCAAGTGATGTCCC         GCGGCGGCGCC CCAG GGCGCCGCCGC          TTCTTGGGTAGTGCC 100 350
LQ332_RS00285 NONE
LQ332_RS00290   65657 ..   65685 +  -8.1  -2.90763   GACCTTGGTCGACAC        GGTAGATCCACGC CAT GCGTGGATGGATC        TCTGTCAGATATCGA  52 156
LQ332_RS00300   68037 ..   68091 +   -26  -3.17075   CGCCCGCTCACACCA TCCACGCATGGCGTGGATCT-CCTG ACGATA CGGGTAGCTCCACGCCATGCGTGGA TTCCGTTCGAGGCCA 100 41
LQ332_RS00315   71399 ..   71410 +  -2.2  -2.52464   TGCGTGGATGCATCC                CGAT CAAC GTCG                 TCCGTTGCGGCGGCA  37 60
LQ332_RS00325   73508 ..   73536 + -24.7  -3.53224   CGGATATCGACACAG        CAGAAGGCCCGGC ATT GCCGGGCCTTCTG        TTTGCCAGCCGGATC 100 64
LQ332_RS00335   77154 ..   77164 +  -8.2  -2.75481   GGTCCTGCAGCTCTT                 CGCC ACT GGCG                 TCGTTGCCGTTGGCC  52 102
LQ332_RS00350   79240 ..   79262 +   -12  -2.98823   CGCCATCACCTGTGT           GGAGTCGAGC CAT GCTCGACTGC           TGTCTGTCCGGACGA  68 210
LQ332_RS00385   87468 ..   87501 + -12.5  -3.64236   AGTTCAATGCGGTGC     CTGCCCGGTTCCGG GCAGGCA CCGGAG-CGGGCAG     TTTGGCCGTTTGGAT  77 40
LQ332_RS00390   88671 ..   88695 + -13.5  -2.62983   GCCGGCACTACCACG          TGCTGCCGGGC CAT GCCCGGCGTCA          TCCTCTCCGCCTCAA  67 109
LQ332_RS00410   93590 ..   93645 +   -41  -4.56597   TTCGCCATATGAAAA GGGGACGGAGGGGATTAAGTCGTTTA TGCA TAAACGACTTAATCCCCTCCGTCCCC TTTTTCAGGCACGGC 100 29
LQ332_RS00420 NONE
        imuA   98101 ..   98119 +  -2.4  -3.61715   CCACTGAGGCCGCGC             CATGCA CTGGGCC TGCGTG             TTGTTGCCGCAGCTG  50 34
LQ332_RS00430 NONE
LQ332_RS00435  102716 ..  102727 +  -3.6  -2.66316   TTGCGCGCGCCAGCG                CGGG AATC TCCG                 TGATCTGATCGAACA  40 113
LQ332_RS00440  103747 ..  103757 +  -8.2  -3.12895   CAACCGCAACCGCAA                 CCGC GTC GCGG                 TCTCTTCATCACAGG  56 446
LQ332_RS00450 NONE
LQ332_RS00455 NONE
LQ332_RS00460  106519 ..  106546 +  -4.8  -3.28269   TTTTGCTGTAAGGTG        CAGC-CGCTGC CCTTGCC GCCGCGGGCTG        TTCCCTTTCCCAGTT  49 132
LQ332_RS00465 NONE
LQ332_RS00470 NONE
LQ332_RS00475  110523 ..  110535 +  -4.7  -2.57211   GCACCGTCTCGATGG                GCCTC AAC GTGGC                GTTCTAGCCGCCGCT  43 6
LQ332_RS00480 NONE
LQ332_RS00485  112279 ..  112289 +  -2.4  -2.78816   GCCACGTGCGTCCAG                 CCGC AAC GCGA                 TCTCATCGCGCATCG  39 269
LQ332_RS00525  122297 ..  122317 +  -2.3  -3.57587   GTGCAACAAATGCTT            GCCAACCCC CTG GGGCAAGGC            TATTATTTCGCTCCT  50 84
LQ332_RS00530  122404 ..  122420 +  -2.2  -3.60792   CAGCGGTTCGATCCC              GCTTGG CTCCA CCAATC              TTTCGGCATTAGGCC  50 12
LQ332_RS00535  122566 ..  122586 +  -9.7   -5.4505   ATCACGAACAACGAG            GACCCGG CCGATAA CCGGGTC            TTTTTTGTTCACCGC 100 44
LQ332_RS00540  122808 ..  122831 +  -4.6  -3.30124   CGCTTGGCTCCACCA          CTTTCGAC ATTAGGCC GTCGAAGG           TTCTACAACATGAAG  51 26
LQ332_RS00545 NONE
LQ332_RS00550 NONE
LQ332_RS00555  123189 ..  123206 + -12.7  -5.31519   GCCAATTCTTGAAAA             CCCCGAC CCTG GTCGGGG              TTTTTCTTTGCCTGT 100 37
LQ332_RS00565  124926 ..  124944 +  -2.3  -3.90112   CGCGCCGAAAGCGCC             GCGGCGA CAGGC TCGCTGG             TTTCGTTGCGGGCCA  56 223
LQ332_RS00575  125367 ..  125387 + -16.9  -4.28254   CACCACTGCATCAAA            GGCCAGGTC CCC GACCTGGCC            TTTTGCATGTTGCGG 100 36
LQ332_RS00580  127272 ..  127305 +    -6   -3.4252   CTCTTCCATGCTGCG    CGCCGC-C--GCCGAGG CTT CCTCGACCAGCGCGGCG    TTCTGCTGGGTGCCC  55 127
LQ332_RS00590  130972 ..  130992 +  -7.5  -2.62396   CTGTGTGAGTGGAGA            TGCGCGC AGTATTC GCGCGCG            TCCTCTCACAGGCTG  50 438
        ppsA  148183 ..  148198 + -11.8  -4.02132   CGCTGAAAACAGAAA              CCCCGC CTTG GCGGGG               TTTCTGCGTTTGGGG  84 51
LQ332_RS00675  149132 ..  149147 + -11.8   -4.4874   TCTGCCCGCATGCAA              CCCCGC CTCT GCGGGG               TTTTCAGTTTTTGGC 100 69
LQ332_RS00680  150309 ..  150338 +  -7.7  -2.90194   GGTCAGCCCAGCCTT       CCGCCAGTGCCTGC TCG GCGCGCTC-GGCGG       TGTACTTGCCGGCAT  50 241
LQ332_RS00710  154917 ..  154949 +  -6.1  -2.71011   GATGAATCCAGGTCT      GCACGCTGGATCGGG ACG CGCGATACTACGTGC      TCATTGAAAGCACCT  46 36
LQ332_RS00715  155417 ..  155452 +  -3.7  -3.65902   ACGAGGGCTGAGATC    AGCCCCGGCGGCGGG GGTCAA TCCACGGGCGGGGCG     TTTGCCTCGAATGCC  53 30
LQ332_RS00725 NONE
LQ332_RS00730 NONE
LQ332_RS00735  159132 ..  159164 +  -3.9  -3.58343   GCTCGCGGTTCCAGT      CGCTGTAGGCGCGCG GAC CGCCCTTCTGCGCCG      TTTCCGGGTACTGCA  51 275
LQ332_RS00835  179522 ..  179552 +    -3  -2.92792   GGGCCGGGCGGCGGC       GCGGTGGGCCGGCG TGT CACCGATCAAACGC       TGATTTACCCTGAGT  42 43
LQ332_RS00840  181263 ..  181275 +  -3.3  -3.14211   GTCGCGGCACCACCA                GCAGC CCA GCTTC                TTCATAGAAGCGGAT  45 446
LQ332_RS00850  182649 ..  182662 +  -5.9  -3.09516   CGCTGGGTCGCTGAC               CGGGC CGGC GCCTG                TTGAGTCGTGCAGGC  49 8
LQ332_RS00855 NONE
LQ332_RS00860  183672 ..  183684 +  -4.7  -2.79327   GTCCGATTGTGCGTG                CCGGG TGT CACGG                ATTTGAATCCCATGG  45 94
LQ332_RS00865  183999 ..  184014 +  -2.4  -3.71848   TGCCGGTTGCCGCGC              CTGCGT TGTC GCGCCG               TTCTTGATCAGGCCG  53 52
LQ332_RS00870 NONE
LQ332_RS00875  184688 ..  184724 +  -5.3  -2.78463   GGCGATGCCCTTCAT  GCCG-GCG-GTGTGCA-GG GCG CCATG-ACACGCGCTCGGC  TATGCTGCGCCACCT  44 171
LQ332_RS00880 NONE
LQ332_RS00890  188745 ..  188757 +  -4.1  -2.92928   GGGATAGGCCCCGAA                GCGTT GCA AATGC                TAATCTTTCTCATTT  44 50
LQ332_RS00895  190918 ..  190929 +  -7.2  -3.29043   CGGGTGTACGTGCAG                GCGG CCTA CCGC                 TTCTGAGAAGGCCTT  54 8
LQ332_RS00920  195688 ..  195723 +  -2.4  -3.53811   GAGACCCAGCGCGCC    ATG-CCAAGCCGCCTTA TCA TGGGGCGGCAAGGGCAC    TTTACGCCCGGTGAC  47 99
LQ332_RS00925  198551 ..  198571 + -10.4  -3.15544   CCGCCCAGTAATTCA            CGCCCTGA GTGGA TCGGGGCG            TTGGTCAGCATACGG  63 58
LQ332_RS00940  201582 ..  201608 + -13.6  -2.60798   CGGCGCCGGAATACA         GCAACGCCGGGC ATG GCCCGGCGCTAC         CTTCCTGCTTTCTCA  70 42
LQ332_RS00950  203414 ..  203434 + -19.7  -6.22802   CCCGGCCCACCCTGG            CGGCCCCGC TCT GCGGGGCCG            TTTTTTTTTGTGGCG 100 111
LQ332_RS00955  203917 ..  203933 + -12.3  -2.85999   GATCACGGTGGTTCA              TCCACGC ATG GCGTGGA              TCTACTGTGGCATCG  66 39
LQ332_RS00965  206162 ..  206190 +  -7.4  -3.59979   CCGCCCCGCGCAACA        CTCTGTCCGTCG TCCAT TGACGGAAGGAG        TTTGCGATGACCGCC  63 110
LQ332_RS00970  206796 ..  206819 + -12.4  -4.52589   GGGTTCGTGATGTTT          AGACGGAGGC TTCG GCCTCCGTCC           TTTTATCTGGAGAGG 100 52
LQ332_RS00995  212115 ..  212127 +  -3.3  -2.78596   TCGGGGAAGGCCCAA                CTCCC ACG GGAAG                TGTGATGAACCACTA  40 89
LQ332_RS01000  212629 ..  212647 +  -2.4  -4.41494   CATTCCCTGAGCGCA             ATTGTTGC AAT GCAATAAA             TTTTGATTGACAATC  65 31
LQ332_RS01005  213996 ..  214007 +  -5.8   -3.1364   TCACCCATCACGTAA                TCCC AACC GGGA                 TTCAGTCGTTGCATG  49 82
        hutI NONE
        hutH NONE
        hutG NONE
LQ332_RS01035  221540 ..  221575 +   -14  -2.53263   GGCACTACCGGGAAC    GTGTGGTAGTGCCGGCC GCT GGCCGGCACCGC-ACGC    TGCGTTGCCCGTGCA  70 54
LQ332_RS01040  223238 ..  223262 +  -7.7  -3.14878   CGGCCATACGCCGTC          GGTGGGTGACG TGG CGCCGCCGACC          TGTTAACTTGCGCGC  55 152
LQ332_RS01045  225822 ..  225837 + -11.8  -3.01924   ACGCTCGTAGGTGCA              GGCGCG GCAT CGCGCC               TCTTCCGCGGCAGTG  62 434
LQ332_RS01060  228044 ..  228059 +  -4.6  -3.14132   CACGCATTCGCGGTG              TGGACG GAAA CGGCCA               TTGGTGCCGGCCAGG  47 473
LQ332_RS01080  231324 ..  231334 +  -2.4  -3.05384   GTCACGCGCGCAGGA                 CCGG TTA CCGC                 TTGCCTGAGCGCAAC  42 7
LQ332_RS01110 NONE
LQ332_RS01115  238888 ..  238898 +  -8.2  -3.15861   GCGCTGTTCGATCCA                 GGCG CAC CGCC                 TTCGTGGCCGTACTG  56 274
LQ332_RS01130 NONE
LQ332_RS01135  242737 ..  242773 +  -9.4  -2.52896   CCACGCCATTGGGCT   GCGGT-GCGGGCTCCGGC GCG GCCGGA-CCAGCGACCGG   TGGATTCGCCGCTGC  51 424
LQ332_RS01185  258098 ..  258127 +  -7.1  -3.91897   GGGCGAACCTTGGTT       CGCCCTATCCACGC ATG GCGTGGATCGA-CG       TTTGTGAGTGCCGAC  64 53
        asnS NONE
LQ332_RS01225 NONE
LQ332_RS01230 NONE
LQ332_RS01235 NONE
         can NONE
LQ332_RS01245  268616 ..  268627 +  -3.6  -2.51259   GAACGCTAGTTGCCA                GCCT TGGT GGGC                 GCTTTCTTGTACGTG  39 47
        kynU  270013 ..  270026 +  -2.3  -3.64822   CGTCGAGGAAGTGGA               AGCCT GGGC AGGCC                TTTGAGTCGGCCCCT  50 7
LQ332_RS01255 NONE
        sbcB NONE
LQ332_RS01265 NONE
LQ332_RS01270  274559 ..  274576 + -12.7  -2.79183   AGTCTTCACCCGGTA             CTGCCGC GGTT GCGGCAG              TCTGGTCGCCATGAA  69 40
LQ332_RS01275  275198 ..  275256 + -15.3  -3.41051   ACAGCCCCTAGCCCT CGTTGGCGACGCCGTGCG-GCACGTGGCC GGC GGCCACATGCTCGCG-GGCGCTGTCGATG TTGTGCTGCGAATCA  84 85
LQ332_RS01295 NONE
LQ332_RS01300 NONE
LQ332_RS01305  287518 ..  287539 + -17.3  -5.45652   GCGCTGAAACGAAAA           GGCCCCGGA GCGA TCCGGGGCC            TTTTTTGTTGCCGCT 100 50
LQ332_RS01320 NONE
LQ332_RS01325 NONE
        metH  294049 ..  294104 + -30.1  -4.68994   CGAATGACACAAAAA GGGGACGGAGGGGATTAAGTCGT TTATGCATTC GCGACTTAATCCCCTCCGTCCCC TTTTTGCCTCATCAT 100 34
LQ332_RS01335  295622 ..  295634 +  -6.2  -3.54424   AGCGATAGGGCGGCG                CCGG CAGCA CCGG                TTTGGGCGCCTCCAG  57 337
LQ332_RS01370 NONE
LQ332_RS01375 NONE
LQ332_RS01380 NONE
LQ332_RS01385  304274 ..  304287 +  -2.3  -2.55544   CTGATCCCATCCACC               TGGAG GCAT CACCA                TGCGTTCCCTGCTCG  38 37
LQ332_RS01390 NONE
LQ332_RS01395 NONE
LQ332_RS01400  306347 ..  306365 + -17.4  -3.97088   CCGTCGCTGAAAAAA             CGCCGCCC CCG GGGCGGCG             TTTCCTCTTGTAGAG 100 31
        purB  309765 ..  309801 + -23.9  -4.07568   TGTCGGGACGGAATT    TGAAAGAGGGACGCGGC TTC GCCGCGTCCCTCTTTTG    TTTTGGCACGAGCAA 100 277
LQ332_RS01415 NONE
LQ332_RS01420  312556 ..  312577 +  -2.9  -3.81137   CGCGGTGGTGCCCCT           TCGTGTCCC GTTG GGGGTACAA            TTTGGCTGTTTGAAC  54 96
LQ332_RS01425 NONE
        sucB  316758 ..  316781 + -19.6  -3.44527   GTAAGAAACCTCCCG          CCCCTCCGCG CCTG CGCGGAGGGG           TTCTGGTAATGCATC 100 37
        lpdA  318295 ..  318310 + -11.8  -5.45652   CCCGGATATGAAAAA              CCCCGC CTCG GCGGGG               TTTTTTGTTGCCCGT 100 74
LQ332_RS01495 NONE
LQ332_RS01500  333143 ..  333175 +  -7.5  -2.77235   GCTGCCGGCGCTCTA      ACGGTACTGCCGGCC CCC GGCCGGCACCAGCGC      TGATTCGATCATTCC  51 25
LQ332_RS01510  334590 ..  334606 +  -6.5  -3.68222   TGCAGCCGGGCAGCA              CGCGC ACGGTTG GCGCG              TTGTTCACGTTCGAA  59 54
LQ332_RS01515  335221 ..  335238 + -14.1  -4.72272   ACCGGCAACGAAAAA             GGCCCGC TTGC GCGGGCC              TTTTTCGTGCCGACG 100 54
LQ332_RS01525 NONE
LQ332_RS01530 NONE
        arsC  337817 ..  337872 + -42.4   -4.5442   TCCTGTAACGGAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTCTGGTTACCGC 100 33
LQ332_RS01555 NONE
LQ332_RS01560  342200 ..  342211 +  -3.6  -3.64703   CGCGTGGATGCGGGA                GGGT CAGA GCCC                 TTTGCGTGGCAAAGG  51 142
LQ332_RS01565  344193 ..  344207 +  -4.3  -3.60627   TCTCGTTCCGCCCAA               TGAGA ACCTG TCTCA               TTTGAGATAGAATCA  53 48
LQ332_RS01570  345043 ..  345063 + -16.1  -3.14132   GATGCTGCAACGGGA            GTGCCGGCC AGT GGCCGGCGC            TTCCTGGCCCACGGG  82 39
LQ332_RS01580  347912 ..  347931 + -16.4  -6.17268   GGCCTGAAACGGAAA            CCGCCCGG GAGA CCGGGCGG             TTTTTTTTGTTGTGA 100 54
LQ332_RS01600  350898 ..  350916 +    -8  -2.93901   ATCACGCCGAACGCC             GCGCCCGC CAG GTGCGCGC             TGTGGTTGATGCGGT  50 184
LQ332_RS01615  354089 ..  354122 + -21.1  -3.16564   GAACGACTGCTGCAA     CAGAAAAGGCCGGGG TCTC CCCCGGCCTTTTCCG      TTCATCCCGTCACCG 100 106
LQ332_RS01625 NONE
LQ332_RS01630  356261 ..  356271 +  -8.2  -2.77899   GCCAGGTGCCGGACT                 GCGC GAT GCGC                 TCCTTGCTCCAGCCA  52 450
LQ332_RS01645 NONE
LQ332_RS01650  359237 ..  359260 + -16.7  -3.68024   CCCGCCTCGCCCCCG          CCGCCCCGG CCCTGT CCGGGGCGG           TTGTCTGTTGACCAG  91 70
        zupT  360145 ..  360180 +  -5.3  -2.82623   GTGGATCTACCCAAA    CAAGGTAGCGGCCAGG CCTGC CCCGG-CGCTACCCGG    TCATTGTCAGCGCAG  45 71
         rne  364797 ..  364832 + -22.8  -3.88291   TTTGATCGCGTAAAA    C-GAAACGGCGGGGATC GAT GATCCCCGCCGTTTCCG    TTTGTGACCCTGGTC 100 47
LQ332_RS01720 NONE
        scpB NONE
LQ332_RS01730  382555 ..  382584 + -20.9   -3.6502   TGGCCACGCTGACAT       GAAAAACCCCGGC TCCG GCCGGGGTTTTTC        TTTACCTGGCAGGTC 100 45
LQ332_RS01735  383034 ..  383064 +   -14  -3.16881   GACGGAGGGGATTAA       GTCGCTTTCGCCCC TTT GAGGCAAAAGCGAC       TTAATCCCCTCCGTC  76 65
        ccmA NONE
        ccmB NONE
        ccmC NONE
        ccmD NONE
        ccmE NONE
LQ332_RS01780 NONE
LQ332_RS01785 NONE
LQ332_RS01790 NONE
LQ332_RS01795  392540 ..  392595 +  -9.7  -2.50994   TGGAGCTGCGCTTCC CATAACGCGCC-GCGGTAG-TGCCGGCC GCT GGCCGGCAACCAC-GCAGGCGCATCAGG ATTCATGAGGTTGCC  55 21
LQ332_RS01800 NONE
LQ332_RS01805  394166 ..  394186 + -12.5  -3.14026   CCACCCGCTGCGGTA            GTGCCGGCC GCT GGCCGGCAA            TTCCGTATCCGTATC  69 41
LQ332_RS01820 NONE
        cydB NONE
        cydX NONE
LQ332_RS01835  400964 ..  400984 +  -7.6   -5.4833   GGTGGTCGCATTGAA           GCCTGG-TG AAGT CATCCAGGC            TTTTTTGTTCCCTGA 100 45
LQ332_RS01840  401181 ..  401206 +  -7.5  -5.71712   GTGGTCACCAAGAAG         CCTGGAAGACG TCAC TGTCCTCCGGG          TTTTTTTGTATCAGC 100 46
LQ332_RS01845  402878 ..  402888 +  -5.4  -4.69622   AACGCTGGCATGTGA                 TGTG CGT CACA                 TTTTTCAGGTTGTCT  77 316
        pgaA NONE
        pgaB  406851 ..  406876 +  -3.9  -3.09671   CCGGAGAAGTGACGT         GGACATGCATC CGCT GCTGCAGGTTC          TGTTCCAGTTCGCCT  45 29
        pgaC NONE
        pgaD  408662 ..  408678 + -12.3  -3.38294   CTACCGCGAAGAGCA              TCCACGC AGG GCGTGGA              TCTGTTTATGTACGC  73 115
        cysS NONE
LQ332_RS01930 NONE
LQ332_RS01935  423763 ..  423778 + -11.8  -4.42386   TCCGCCAACAAAAAA              CCCGGC CAAG GCCGGG               TTTTCTGCATGACCA  95 363
        yidD NONE
LQ332_RS01950 NONE
LQ332_RS01955  427807 ..  427837 +  -8.3  -3.19192   CTCTTCGGCGCCCTG      CTGG--ATGCCGGCC AGC GGCCGGCATTACCCG      TTACGTTGGATCAAC  59 74
        epmB  433260 ..  433272 +  -5.5   -4.2558   GGTGTAATTCCGCAG                GGGGT CAG ATCCC                TTTTCCTGCGGAATA  70 34
LQ332_RS02005  438166 ..  438185 + -11.4  -4.54727   AGCGGTTCATGGAGA            CGGCACCT GCGA GGGTGCCG             TTTTCGTTTGCGCGG  91 53
      gluQRS NONE
LQ332_RS02020 NONE
        phaR  442201 ..  442221 + -19.7   -4.4078   CGGCGGGAACGAAAA            CGGCGCGCC CCT GGCGCGCCG            TTTTGCTTGGAACCA 100 51
        queG NONE
        xseA  452799 ..  452840 +  -4.9  -3.15663   CAGCGGCACCGCCTC GCGGGGATCGAAGCACGCCG CTG CGGCCAGCATC-AGCCCCAC TTCGTCGGCCTGGGT  47 504
         rnd  456657 ..  456696 +  -8.4  -3.17075   AGCGCAGCTGCAGGC  GCTGCTGCCG-GCACGCTG AAG CAGCGGGCGCGGCGCCGGA  TTGCATTCCCGCCGC  57 7
LQ332_RS02090  459458 ..  459482 + -20.1  -5.79595   CCACTCATAAGAAGA          CCCGCAGATCG TCT CGATCTGCGGG          TTTTTTCTTTTCAGC 100 38
LQ332_RS02100  460792 ..  460822 +  -8.9  -3.61715   TACCGGGAACTCCGC      CGCCGGTGCGC-CG GGAC CGAGCATGCCGGCG       TTGTTGAGCGCGATG  63 497
LQ332_RS02110  462360 ..  462373 +  -9.5   -2.8474   GGTCCGGGCCGGGCT               GCGCG ACGC CGCGC                TCGTTGTAGGTGGCG  57 322
LQ332_RS02120  463586 ..  463605 + -12.2  -5.40474   GCCACCATGTTTGAG            GACCTGCA GAAA TGCAGGTC             TTTTTTTCCGGAAAT 100 34
LQ332_RS02125  463730 ..  463749 +  -7.1  -6.07627   GCCACCATCTTTCGA            GACCTGC AGAAAG GCGGGTC             TTTTTTTTTGCCCGT 100 34
LQ332_RS02130  464426 ..  464438 +  -4.7  -3.53012   AGGCGCGTCGCACGC                AGCCG ATC CGGCA                TTTCGCACGCCCGGC  53 54
LQ332_RS02135 NONE
LQ332_RS02140  466920 ..  466952 +  -6.2  -3.14931   CCAGGCACCGGTAGT     GCCGGCCGCTGGCCGG CAA CCG-C-AACAGCCGGC     TTCCTGCGGGATGGC  49 52
LQ332_RS02145  467916 ..  467937 +  -2.9  -3.90112   AAATGCAACCCTCAC           CGTC-CTGTC ACG GGCGGCGGCG           TTTGCTTGCCCCACC  56 49
         dxs  470375 ..  470388 +  -5.3  -4.58395   AAAATGTGAGCTGTA               TCAGA TTAT TCTGA                TTTTTACGGGCTGAA  74 495
LQ332_RS02170 NONE
LQ332_RS02175 NONE
LQ332_RS02180 NONE
LQ332_RS02195  474580 ..  474593 +  -5.9  -3.12351   GCGATGAACACCTCC               GGGCT GCGC GGCCC                TTCGCTGTGCCCCGC  50 189
LQ332_RS02205  475661 ..  475677 +    -3  -2.77899   CCAGCCCAGGAGCCT             TC-GGTG GCAC CACCCGA              TCCTTCCTCGACGAC  40 109
LQ332_RS02210  476143 ..  476164 + -11.5  -3.83844   CGCACGCACAAAAAA           GCCCACGCA TCGC TGCGCGGGC            TTCTTGATTCATCAC  79 55
LQ332_RS02260  484712 ..  484743 +  -9.3  -3.54741   GCCTGGCATCGCCCG      GGCACGGGGTCAC CCTGAT GTGGCCGCGCGCC       TTTGCCGGCATCATC  65 8
LQ332_RS02265 NONE
LQ332_RS02270  486790 ..  486842 +  -5.4  -3.77302   ACAGGTCGGCACTGC CCGGCGTCGGCCGCAGCGCG-TGCGG TTG CAGCGGTGCGCTG-GCCGGATGCAGG TTGATTTTCTGCTGG  58 253
LQ332_RS02420 NONE
LQ332_RS02425 NONE
LQ332_RS02430  520180 ..  520199 + -12.1  -4.37711   CGCTTGAACGAAAAA            CGCCCCG GCTTTG CGGGGCG             TTTTCCGTTTGCTGA  95 58
LQ332_RS02460  526761 ..  526791 +  -5.3  -2.52464   ACGATGCGGGTGCTT      CCG-CCATCCCGGC ATCC GCCTGGACGGATGG       TGACTTCCGCGCGCA  43 371
LQ332_RS02505 NONE
         asd  536637 ..  536667 + -16.8  -3.14132   GCTGCGCTGAGGCTT       CGGGAGTGCCGGCC ACT GGCCGGCATCTCCG       TTGATCCAACGCGGC  85 31
LQ332_RS02525  540338 ..  540391 + -15.3  -3.21099   CAAGCGCTGATCTGC CACG-GCCGGGGTCAGAGCCCTTTCC GCT GGAAAGGGATCTGACCCCGCTTCCCG TTCGTCATCCAGAAA  83 31
        greB  540903 ..  540921 +  -2.3  -3.33162   CACCTTTGCGGTGAT            CGGGGTCG AGTA CG-CGCCG             TTGTAGAGTCGACTG  45 1
LQ332_RS02545 NONE
LQ332_RS02550  544563 ..  544576 +  -2.3  -2.71791   CGGCTAGGATATCCG               GCCCA GTCC TGAGC                GTTTGCCGACCCGAT  38 14
LQ332_RS02555  545053 ..  545064 +  -3.6  -4.07568   CGATGATGCCGCAGC                GCGC GTAG GTGC                 TTTTGCCCAGGCACA  60 321
LQ332_RS02570  549369 ..  549388 + -16.4  -5.75945   TGCGTGTCTGGACCA            GGCCCCGC TTCG GCGGGGCC             TTTTTTTTGGCCGGT 100 59
LQ332_RS02575  552672 ..  552700 + -17.5  -5.00616   AGGTAGGAACGCATG        GGAAAGCCCGGGT CTG AACCGGGCTTTCC        TTTTTTGAACCGGCC 100 54
LQ332_RS02580  554752 ..  554772 +   -14  -3.62354   GCACGCTGAACGAAC            CGGGGCAG CACGC CTGCCCCG            TGTTTCCTTTGGCAC  84 32
LQ332_RS02585  555815 ..  555825 +  -2.4  -2.90075   CACCCTTGCAGGTCT                 GGCC GGC GGCG                 TATCGTTCGGCCCAC  40 138
LQ332_RS02590  558020 ..  558049 + -21.5   -5.0538   CGCTGCGGCAGACCT       GCAAGGGCCCGGG ACTT CCCGGGCCTTTGC        TTTTTTGCGATGCCC 100 52
LQ332_RS02595  560285 ..  560302 + -14.1  -5.76949   CCGTGGTAACGCAAA             GGGCGCC TTCG GGCGCCC              TTTTTTTTGCGGGTG 100 52
LQ332_RS02600 NONE
LQ332_RS02605  562966 ..  562983 +    -4  -4.07885   ACGCCGCCGGAAGCG             CCCAGC ACCGTG GCAGGG              TTTTCCAGCAGCGTA  60 454
LQ332_RS02645  568907 ..  568919 +  -4.1  -5.58454   CGCTTTTACAGGGCA                TGATG CCC CATCG                TTTTTTTCCTGTGAC 100 123
LQ332_RS02650  569754 ..  569772 +   -16   -5.4505   GATACGCAAAGCAAA             GCCGCTGC CCT GCAGCGGC             TTTTTTGTTGGGCCC 100 65
LQ332_RS02660 NONE
LQ332_RS02665  574157 ..  574168 +  -5.8  -3.56643   TGCCGCGGCCAAGCC                CCCA TGGA TGGG                 TTTACGGCGTCTCCC  57 425
        tilS NONE
LQ332_RS02675  575875 ..  575894 +  -5.7  -3.65991   GAGCCTTTCGATCCG            CC-CAGCC ATGAC GGCTGAGG            TTCTGTTCGCGCGCT  57 8
LQ332_RS02680  576806 ..  576824 + -17.4  -4.27584   CCCCGCACATGAAAA             CGCCCGGC AAT GCCGGGCG             TTTTCAGTTCCGCAT 100 71
LQ332_RS02695  579502 ..  579522 +  -6.1  -3.54459   CCAGATCGTTGCCGA            CCATGCGCA CCT TCTGCATGG            TTTCCGGGCCGTTGC  57 195
LQ332_RS02720  587746 ..  587768 + -18.4  -4.77157   GCCCTGGCCGACAGA           GGCGGGTCCC GCT GGGGCCCGCC           TTTTTCATGCGTTCC 100 49
LQ332_RS02725 NONE
LQ332_RS02730  591606 ..  591635 + -25.1  -2.70932   TTGCAGTGCCACCCT       CGAAGGCCCGGGC CATT GCCCGGGCCTTCG        TCGTTCCGGCACGGA 100 47
        arcD  593171 ..  593206 +  -8.9  -3.12351   CACTGTAGAACCGAG    CCCACGCTCGGCTTC GCACAG GCAGCCGAGCATGGC     TTGGCTCTACAACCG  57 33
        trxA  602368 ..  602394 + -10.1  -2.52543   CGGGCAATAATGCGC        GCGCTGGCGGCC ATGC GGCCGCCA-CGA         TCCGTTCGGGGGGAT  58 79
LQ332_RS02790 NONE
LQ332_RS02795 NONE
LQ332_RS02800  606276 ..  606289 +  -2.3  -2.64933   ACGTACGCTGATCCA               GAGCG CCGG CGCTA                TCCTCTGCCTCCCTG  38 30
LQ332_RS02805  607061 ..  607071 +  -8.2  -3.35679   AGTCGCGCACAGCAG                 CGCC CGG GGCG                 TTCTCCATCACCAGC  60 51
LQ332_RS02815 NONE
LQ332_RS02820  609953 ..  609977 +  -7.1  -3.01791   CTGGCCGTACGCGGC          CGGATCGTGCA AGC TCCACGGTCTG          TGTTCCACGGAAGCT  50 76
LQ332_RS02825 NONE
LQ332_RS02830 NONE
LQ332_RS02835  613449 ..  613461 +  -5.5  -4.07568   TTGAACGTGTGTTCC                GGGGT CAG ATCCC                TTTTCCAAAGGAAAA  66 37
LQ332_RS02840  614323 ..  614346 +    -3  -3.35813   CGCGCAGACCTGGCA          GCGCGAGT AAGCACCC GCCCGCGC           TTCATTCCCGTGACC  47 16
        metG NONE
LQ332_RS02850 NONE
        rnfB  617626 ..  617638 +  -5.5  -3.53012   ACTGCCCCTATAACA                GGGGT CAG ATCCC                TTTCCGCAGGAAAGG  55 28
        mprF  621011 ..  621028 +  -2.6  -5.00616   CGTCCTCATCCTTGT             CGCCGT ACACGC ACAGCG              TTTTTTCCGCCGGCA  81 256
LQ332_RS02890  625507 ..  625522 + -11.8  -2.71712   GCCGCCATTGTAACC              GCCCGG CTCC CCGGGC               CTTTGCGCGCGGCGG  65 411
LQ332_RS02900  627058 ..  627074 + -10.1  -2.87931   CACCGCTGCACCTTC              CACTGGC CAC GCCGGTG              TGTGTCCACAGTGCA  60 83
LQ332_RS02905 NONE
LQ332_RS02910  627890 ..  627900 +  -4.6  -3.14344   GGCGCTCCACCTGGC                 CGGC GTC GCTG                 TTGATCGAGCCACTG  47 197
LQ332_RS02930 NONE
LQ332_RS02935  630961 ..  630973 +  -6.3  -3.66095   CAAATCGTTCCGATA                TCGAA ATT TTCGA                TTTCGATGGAGATTT  57 284
LQ332_RS02950 NONE
LQ332_RS02955  633529 ..  633540 +  -3.6   -3.1247   GGTTCTGAGGTATGC                GGGT CAGG GCCC                 TTGCCTGTGGCAAGT  43 33
LQ332_RS02960 NONE
LQ332_RS02970  637856 ..  637886 +  -8.8  -3.05384   CCACGACTCCAGCGC       CACGCCGAACAGCG CAC TGCCGCGCGGCGTG       TTCCATCCCGCCAGC  55 184
LQ332_RS02980  642025 ..  642038 +  -9.5  -3.11634   TCATCATGTTGTCGG               CGCGC AGTT GCGCG                TTGCCTAATCTAACG  60 104
LQ332_RS02985  642435 ..  642466 + -19.6  -3.54424   TCTTCACGCTGTTCT      GGAAAAGCCGCTGG TTCG CCAGCGGCTTTTTC       TTTGCCCCGATGCCG 100 50
LQ332_RS02990  643022 ..  643056 + -20.8  -4.26188   CATGGGCCCGGCGCT     ACAGGAAAGCCGCGGC GCC GCCGCGGCTTTTCTGC     TTTTCGCTCTCTGCC 100 69
LQ332_RS03000 NONE
LQ332_RS03005 NONE
LQ332_RS03010 NONE
        pdeM  650798 ..  650824 +  -3.7  -3.66356   GGTCCTCGTGCAGCA        TCTGC-AGCAGT CCGC GCAGCTTGCAGA         TTTCCGATTCCAGCT  51 236
LQ332_RS03065  658996 ..  659020 +  -7.1  -4.05747   TTTTCCGCGATCGGG          TAGATCCACGC CAT GCGTGGATGAA          TTTCTGTCAGATATC  67 243
LQ332_RS03115  670344 ..  670366 + -14.9  -4.89838   AGTTCCACAGCAGAA           GCCAGAGCC AAAGC GGCTCTGGC           TTTTCTGTTTGTTGG 100 87
LQ332_RS03120  671873 ..  671888 +  -3.3  -2.73124   CGCTGATCACTGAAA              TGTGA CATAAA TCACA               CTTTAGACCGTCAAA  40 104
        aqpZ  672648 ..  672676 + -24.7  -3.15999   TGATCCATGAGGCAC        CCATTGCGGCCGC CCT GCGGCCGCAATGG        TTACGTCTGTAACCG 100 38
LQ332_RS03130  673344 ..  673372 + -10.1  -3.10715   ACACCTCGATCCGCA        GGTAGTGCCGGCC GCT GGCCGGCAAACCC        TTCGATCCTGATCAA  63 79
LQ332_RS03140 NONE
LQ332_RS03145  676863 ..  676908 + -23.5  -4.26202   TGACGGCGAGAAGCA TCAGGGGTCAGATCCGTTTCC TCCG GGAAACGGATCTGACCCCTTC TTTGTTCATGGGTCT 100 97
LQ332_RS03165 NONE
LQ332_RS03170 NONE
LQ332_RS03175  684946 ..  684988 + -33.8  -4.50058   TGTTGGACATGCCGA TGGGGTCGGATCCGTTTTCC GTA GGAAAACGGATCCGACCCCA TTTTGATTGTCGATA 100 261
LQ332_RS03180  687545 ..  687570 + -18.3  -3.23216   GGCGAAATGAGAAAA         GGGGCGGGTCC GCGA GGATCCGCCCC          TTCCTGGTAGTGCCG  93 207
        gcvP  694286 ..  694305 + -16.4  -3.40522   CATCGGATGACAAAA            CGGCCCGC GAAA GCGGGCCG             TTCTCATAAGGGCGT  90 51
LQ332_RS03220 NONE
LQ332_RS03225  700205 ..  700226 +  -9.3  -3.05816   TCAATCCGCGCAATC           CCGGCGGTG AAGC CGCCGCCAG            TTCGATGGCCAGTGG  55 480
LQ332_RS03235  700920 ..  700942 + -15.6   -3.2794   AGCGGGCGATGGCAA           TACGGCCGCT CAA GGCGGCCGTA           TTCCTGTCACTGCAC  86 63
LQ332_RS03245 NONE
LQ332_RS03250  706091 ..  706118 +  -2.7  -2.90496   GCTCCGCTGGCATGG       TGGACGGGCATCC CCTT GGA-GCC-GCCCA        TGCTTTCAGCCCGCG  40 89
LQ332_RS03255 NONE
LQ332_RS03260  708109 ..  708126 + -14.1  -4.62336   CTCAATAACGAAAAA             GCCCCGC TTTC GCGGGGC              TTTTTGCGGTCACCT 100 372
LQ332_RS03285  713228 ..  713249 + -11.6  -3.05384   CTCCCGCCGGTAAGG           TGCCCGCA CTACAC TGCGGGCA            TTACATGGGGAACAA  66 76
        pilH  713697 ..  713717 + -12.5  -2.53876   TCCAGGGCAATGAAG            TTGCCGGCC AGC GGCCGGCAC            TACCTTCAAATGGCC  64 85
LQ332_RS03300 NONE
LQ332_RS03305  716242 ..  716266 +   -15  -2.71364   CCCGTGTTCGGCATT         CGGCGCG-CGC GCCA GCGTCGCGCCG          TCATTGAGCCCGTCC  70 307
        prpR  733485 ..  733502 + -12.7  -2.73875   CTGAAGGCCTGTAAA             GCCGAGC CCAT GCTCGGC              TGATGTTCGCGCGAA  68 27
LQ332_RS03375  735810 ..  735828 +  -9.5  -3.01712   CAGCGGCAGGTGCAG             GCCGTGC GCTGA GCGCGGC             TATTCCACCAGGAAG  59 14
LQ332_RS03385 NONE
        aroB NONE
LQ332_RS03395 NONE
        hemE NONE
        mdtD  741048 ..  741069 +  -8.7  -2.90763   GCGCGGTTGTTGGTA           GGTGTCGAC CTTG GTCGACACA            TCTGTCAGATCTCGA  55 354
LQ332_RS03420 NONE
LQ332_RS03425 NONE
LQ332_RS03430  750908 ..  750922 +   -10  -3.08813   GAACTGCGGCGTGAA               CCGCTA GAA TAGCGG               TCTCTTCCGGTACCC  63 454
LQ332_RS03440  752396 ..  752412 +  -7.9  -4.08767   ACTGTTAGTCGACTA              TCGCGCG CAG CGCGGGA              TTTTCACGGCCTGAG  71 87
LQ332_RS03445  753995 ..  754030 +  -6.1  -3.12351   CAGCAGCTTGCGGCG   CACG-TCCTCGCC-GGA CAGG TCCAGGCGCGGATCGGG    TTCGGTGTAGCCGGC  50 486
LQ332_RS03465  758127 ..  758160 + -10.1  -2.78715   GCCACGGCGAAGCCG     ACGG-CGGGACCGGGC GCT GACCGGCCCCGGCCGG     TATAATCGGGCGCTT  60 6
LQ332_RS03470  759861 ..  759880 + -13.6  -3.34895   GAAAGGGCGCTCCCC            CTACCGGC GCAG GCCGGTAG             TTCATTGACCATACG  80 69
LQ332_RS03475  760619 ..  760632 +  -9.5  -2.57132   GCAGGTGCTGTAGAC               CGGCG TCCG CGCCG                CTTGTGCACGCCACG  55 28
LQ332_RS03480  762941 ..  762958 +  -6.9  -2.87132   GCACCGCGCATGTAC             GCACCGC GCTC GCGGTGA              TGTATCCAGAGGCGG  49 295
LQ332_RS03500  766415 ..  766434 + -12.2  -3.27907   ACACCCTAGGATCAA            GTTCCCGT CCCC ACGGGAAC             TTCCGTTGTCTGTCC  71 90
LQ332_RS03505  767350 ..  767367 + -14.1  -3.71873   CAGCGACAGACCCGA             GGGCGCC GAAA GGCGCCC              TTTGCATGTGCGTGC  86 60
LQ332_RS03510  770607 ..  770630 + -18.2  -3.44325   GATCAGCTGATGCCG          CAACGGCCCC GCAC GGGGCCGTTG           TTCGTTATGCCGCCT  93 51
LQ332_RS03520 NONE
LQ332_RS03525  774888 ..  774913 + -21.9  -2.91276   CGACACGCGTTGCCT         CGACGGCGGGC CTCG GCCCGCCGTCG          CTTTATCCGCCGACC 100 48
LQ332_RS03530  775619 ..  775675 + -22.6  -3.56246   CAAGAGAAAAAAGAA GAGCAGAAGCAACAGCAAAA-GCGGCC CACC GGCCGCTTTTTGCTGTTGCTGTTGCTG TTGATCTTCTTTTTC 100 236
LQ332_RS03545  779352 ..  779371 + -16.4  -5.35721   GACCGTGAGCCTGAA            GGGCGGCC TGCG GGCCGCCC             TTTTTGTTGTTGTGT 100 53
LQ332_RS03555  781733 ..  781751 +  -7.4  -3.69283   CACTGCCTTCTTGGC             GGTCGC CTTCTTC GCGACC             TTCTTCACTGCCTTC  64 490
        bioA NONE
LQ332_RS03615  791189 ..  791199 +  -3.2  -2.83403   CGCGCATGTGCACGG                 TCTG CGG CAGG                 GTTTCCTCGGAGGCG  42 219
        gshB NONE
LQ332_RS03660  805458 ..  805475 +  -3.3  -4.37198   ACGCCACGCGTGGAT             GCGAG-CG AAG CGACCCGC             TTTTGACTTTGACTT  66 301
LQ332_RS03685  814662 ..  814685 + -13.8  -3.07113   CTGCAGGGCCTGTTG          CGCCTGCCGC GCGC GCTGCAGGCG           TTGCGTAAGCTGCTG  69 511
LQ332_RS03700  818663 ..  818692 + -20.1  -2.76815   GGCGCCCGATCAGGC       CTGGCGCAGCGCGG CCA CC-CGCTGCGCCAG       CTTCTTCGCCGAGAT  93 107
LQ332_RS03710  823608 ..  823650 + -33.8   -5.0065   TGCCGGCAAAGCCAT TGGGGTCGGATCCGTTTTCC GAC GGAAAACGGATCCGACCCCA TTTTGTTTGTCGATA 100 259
        recQ  825712 ..  825770 + -18.6  -2.56715   GCCGGGCGCCCTGCA GAGCCGAGCCCACGCTCGGCTGCCGTTG CCG CAGAAGCCGCCGAGCGCGGGCGTGGCGC TACATTGGTGCAGGT  86 42
LQ332_RS03720  826265 ..  826283 +  -7.3  -3.08934   CGCCCTGCGCACCGC             AGCCGGC CGCCT GCCGGCG             TCTTCACGTGTCTGG  55 57
LQ332_RS03725 NONE
LQ332_RS03730  829115 ..  829169 + -13.6  -2.52464   GTTCTGAGCAGCGGT TCGTAG-GCAGTG--GCCAGCCCCGGC AGCC GCCGGGGCCGGCTACACTGCGCCACGC TCCATTGCAGGCCCC  70 34
LQ332_RS03735  829803 ..  829815 +  -3.4  -4.64763   GAACAGCTCCGACAG                GAAG CTGTC CTTC                TTCTTTTTTCGGTAG  72 128
LQ332_RS03745  831043 ..  831064 +    -3  -3.65529   GCCGGGCTCACTACC          GGCTTGCGCA TACT TGCGC--GCC           TTTCGCTCCCCCTGT  51 64
LQ332_RS03750  831775 ..  831786 +  -3.6  -3.76224   TTGAATAGCGGGGCC                CGGG CTTG TCCG                 TTTCATAGCTGCCCA  55 279
LQ332_RS03765  835249 ..  835268 +  -8.5  -3.44146   ACACTGCGCCATGAT            CCGGGCC ATGCTC GGCCTGG             TTCCTTCTCGGACCC  62 269
LQ332_RS03770  835643 ..  835661 + -10.2   -3.5882   CAGGTGCAACAAAAA             AGCACCGC CAA GCGGTGCC             TTTCGGAATGATCTG  71 51
LQ332_RS03780  837039 ..  837059 + -10.3  -2.57132   GTCGCAGTGGCCGCA            GGCGGCGCC GTT GGCGTCGGC            GTTGTAGCAGGACAC  55 177
LQ332_RS03875  854071 ..  854095 + -11.3  -2.62263   TCGGCCGGGAACTGC          TGCCGCTCGGC GGT GCCCGGCGGCG          TGCTGTCGCCGCCAT  59 345
        ampR  859566 ..  859622 + -44.3   -5.1101   CGATCAGAAAGAAAC GGGGACGGAGGGGATTAAGTCGTTTGT GGC ACAAACGACTTAATCCCCTCCGTCCCC TTTTTTGCGTGCTCA 100 116
LQ332_RS03910  864327 ..  864369 + -32.2  -2.90212   TGAAGAGGAATGCGT GGGCAAATCCGCCGGCCACG GCA CGTGGCCGGCGGATTTGCCG TATCTGGCCTCATCG 100 130
LQ332_RS03915  866305 ..  866317 +  -4.7  -4.10925   GCAACCGGACCCACC                CCGCC TTC GACGG                TTTTCCGCGATCTAT  64 210
LQ332_RS03925 NONE
LQ332_RS03930  870111 ..  870137 + -17.3  -3.77206   CACGCTGGCAACCCT         GCAGCGCGCGC CGGAT GCGCGTGCTGC         TTTCCTCCCATTGTC  93 114
LQ332_RS03935  870972 ..  870989 + -14.1  -4.56367   CTTCTGATGCATGAA             GGGCGCC GCTG GGCGCCC              TTTCTTTCTGCGGTC 100 34
LQ332_RS03955  876293 ..  876342 + -16.3  -3.01712   AGCTGCACCATTCAC GC-GAGCCCACGACGGTGCCGGCC AGC GGCCGGCACTACCGGGGGGTCAGC TGTTCCCACCCAGCG  85 209
LQ332_RS03980 NONE
        otsB  885281 ..  885297 +  -2.1  -2.51547   AACCGAGATGTACCG              CGTGATG ACC CAACCCG              ATCTTGATCTGGGCG  37 64
LQ332_RS03990 NONE
        otsA  888437 ..  888492 + -42.4  -5.10461   GGCTGAAGGAAAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTTCTTCAATCCA 100 35
LQ332_RS04020  892205 ..  892220 + -11.8   -5.0065   AAAGAAGTAAGAGAG              GGCCCC GGAA GGGGCC               TTTTCTTTGTCGGTC 100 31
LQ332_RS04025  894053 ..  894065 +  -4.8  -2.59921   GCACTACCTGCCAAC                GGCT CCCTC AGCC                CTTGTAGCCGTTGCT  43 505
LQ332_RS04045 NONE
LQ332_RS04050  901549 ..  901564 +  -3.2  -3.14881   ATCCACGCATGGCGT              GGATCG ACCT CAATCC               TTGGTAACGCGGTTG  43 183
LQ332_RS04075 NONE
LQ332_RS04080  909940 ..  909968 +  -2.4  -3.00774   CTGGTGATGAGCGGA       CTGCGCTGA-GGGG AAT CCCCATGAGC-CGG       TATGTGGTTGGCCTG  41 17
        coaE  910612 ..  910628 + -12.3  -2.79183   CACTACCGAAGCGCA              TCCACGC ATG GCGTGGA              TCTACTCCAGCTGCA  66 66
LQ332_RS04130  917660 ..  917708 + -12.4  -2.56164   GGATCCGCCCCCTGG CGCAACAGGTCAGAGCCCTTTCC CTGC GGAAAGGGCTCCGACCCCG-GCG GTTGCTGCTTAGAAC  64 252
        thiS  920003 ..  920018 +    -4  -3.53012   CCGGCAATCCGACGC              TGTCAGG CAC CCTG-CA              TTTGCCGGCCAGCGG  51 68
LQ332_RS04150 NONE
        trmB NONE
LQ332_RS04160  923658 ..  923705 + -16.4  -2.52464   GACTGCTCCTGGCTT GATGG-GGTCAGAGCCGTTTTCC TGC GGAAAACGGATCCGACCCCCAGC TGGCTTCAAGCCAGG  80 167
LQ332_RS04170  924513 ..  924545 + -16.9  -3.32844   TCGCGCTGATCCACG      CGTGCGGCGCCCGCT GAC GGCGGGCGCCATGCG      TTCTAGACTGCGGGC  90 32
LQ332_RS04175 NONE
        mscL  925791 ..  925818 + -21.4  -2.86492   CCGGCCGCGACTGCT        CGAAAGCCCCGC TCCG GCGGGGCTTTCG         CTTTGCTGCATCTGG 100 59
LQ332_RS04185  927431 ..  927473 + -18.5  -2.62616   ACCCACCGGGCAATG GCGTGGGTCAGAGCCCTCGC CCTG GCGAGGGATCTGACCC-CGA TCCTGTCAGCCCTCC  86 104
        cysK  943237 ..  943279 + -28.6  -3.51329   ATCCTGTTACGGGCC CGGGGTCGGATCCCTTTTCC GAA GGGAAAGGGCTCCGACCCCG TTCTGCTTCAGCCTG 100 85
LQ332_RS04245  944071 ..  944089 + -17.4   -4.4078   GACGCATGAAGAAAA             GGCCGGGC AAT GCCCGGCC             TTTTCCTTGGCAGCG 100 53
LQ332_RS04290  956459 ..  956478 +  -9.2   -5.5112   CCCTCGCAGCATGTT            GCCTCGGT GATT GCCGGGGC             TTTTTTGTTCCTGGG 100 93
LQ332_RS04295 NONE
LQ332_RS04300  958256 ..  958276 + -13.9  -2.56596   TCGCCATCGCTGTGC            CCGCCGGGC ATG GCCCGGCGC            TCCCTTCATCGCAAA  70 41
LQ332_RS04320 NONE
LQ332_RS04325  963123 ..  963178 + -40.2  -5.14563   CACTGCCTGAAAAAA GGGGACGGAGGGGATTAAGTCGTATG TGCA CATGCGACTTAATCCCCTCCGTCCCC TTTTTTCATCCACGC 100 31
LQ332_RS04405  982959 ..  982983 +  -6.3  -2.71268   TTGCATCCGCCATAC          CCACGCGGATG TCA CATCCGTGCGC          TAGTCTGTCGTCAGG  46 149
LQ332_RS04410  984020 ..  984036 +  -7.9  -3.31144   GCACCGGCTCGAGCG              CGCGGTT GAT GGCCGCG              TTCTCCGCCTCCGCC  55 383
        fdnG NONE
        fdxH NONE
LQ332_RS04500 1010287 .. 1010300 +  -2.3  -3.14344   TTCACCGGTGCTTTT               GGTAG GTGT CGACC                TTGGTCGACACGATG  42 218
LQ332_RS04505 NONE
        fdhE NONE
        selA NONE
        selB NONE
LQ332_RS04525 NONE
        selD 1016029 .. 1016059 +  -8.9  -3.03124   CGCTGATGCGTTGAA      ACGACAAGGGCGCC CGAA GGCGCCCCTG-CGC       TGTTGCCGGATGCAA  56 35
         rph NONE
LQ332_RS04545 NONE
        rdgB NONE
        hemW 1020104 .. 1020134 +   -11  -3.18264   GCACTCCGGTAAAGA       CGGTTCTGCCGGAC AGC GGCCGGCACTACCG       TTCATGCGTCGGGCA  68 78
LQ332_RS04560 NONE
LQ332_RS04565 1022913 .. 1022923 +  -2.4  -4.61231   CCTGAGTGCCGGTTC                 CAGC ACA GCGG                 TTTTTCGCGGTATGC  70 36
        pepQ 1024557 .. 1024573 + -12.3  -2.85337   GCAATTGCCAGTGGA              TCCACGC CAT GCGTGGA              TGATTCATTCGATAT  66 273
LQ332_RS04585 NONE
LQ332_RS04590 1027507 .. 1027530 +    -6  -3.50869   CCTACCCAGATCCTG          CGTGCTGGCTA TAA TGGCCA-CGCG          TTCTCTGCGGTACTC  55 157
        ssrS 1027725 .. 1027754 + -17.9  -3.90744   AATGCAATATTCCAG       CAAGGGCGGCGTC TTCG GGCGTCGCCCTTG        TTCTTTCCGGCACAA  95 36
LQ332_RS04600 NONE
LQ332_RS04605 NONE
        rpiA 1029542 .. 1029556 +  -2.8  -2.66787   TCGTGCTCTGACCCT               TCAGAA GGA TCCTGA               TGATGTCGCTGTTGC  40 30
LQ332_RS04615 1030066 .. 1030115 +   -13  -3.53012   CCCGGCTGGGGCCCC GAT-C-GGGGCCAGATCCCTTTCG CACG CGGAAGGGATCCGACCCCTGCATC TTTCACGCGGCACCG  78 86
LQ332_RS04620 1031147 .. 1031177 +  -2.5  -3.12351   CCCAGCGCGTCCCCG      GCGCGATGCCCT-CC TCC GGCAGGCCCTC-CGC      TTCGCTGTACAGGAA  43 160
        thiE NONE
        hemL 1033258 .. 1033313 + -42.4  -4.30719   GGCTGATCGCAAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTCTTCTAGCCGAA 100 35
LQ332_RS04645 1034489 .. 1034542 + -16.7  -2.52464   AAGCGTTACGCGGTG AGCTGATCGGGGTCAGAGCCCTCTCC GCA GGAGAGGGGTCCGACCCCGG-CACCC TGGCTTCAGCGCGCG  80 20
LQ332_RS04655 1037191 .. 1037201 +  -4.6   -3.7829   GTAATAGGCCAGCGA                 GCGG CCT TCGC                 TTTCCTCGATCTGCT  58 506
LQ332_RS04675 1040628 .. 1040650 + -11.2  -3.05384   GTCACCGGCGCCTGT           AGAGCCGGGC CAT GCTCGGCTCA           TTGAATGCAGCCGAG  66 42
LQ332_RS04690 1044272 .. 1044313 + -10.2  -2.52635   CAGCCTGTTCGATGA TGT-GCCCCAGCAC-CGTGG CCAG CAGCGCGTGCTGGGGCCGCA GTTCGTCGTCGGGGT  55 327
LQ332_RS04710 NONE
LQ332_RS04715 1048908 .. 1048924 +  -5.1  -3.20164   TTCGCGCTGCTGGAC              GGCCT CAATTGC AGGCC              TTGCCTTCCATCTGC  49 113
LQ332_RS04725 1051777 .. 1051798 +  -3.7  -3.72576   CGATGCGTGGATGGC           AGGCT-TGAC GGG GTCAGAGCCC           TTTGCTGCGGAAAGG  55 48
LQ332_RS04745 1053520 .. 1053535 +  -6.8  -3.05844   GCGACGGGGCTGTAA              GCG-GGG TAT CCCGCGC              TGTTGGGGTCAGAGC  51 26
         ppa 1059549 .. 1059598 + -26.5  -3.72576   ACAGCAAGGCCTGAG CCTGAACCGGATCGCTCCGGCGG CAGT CCGCCGGAGCGATGCGGGTCACG TTTCATGACGACGGC 100 27
LQ332_RS04775 1061207 .. 1061232 + -20.5  -2.82449   AACCCTACAAAAAAA         GAGGGCGGACC GTTC GGTCCGCCCTC          CTTCTGTTGCTACCG 100 411
LQ332_RS04810 1072602 .. 1072624 + -12.8  -2.98823   CCCGGTAACGGTTGG           TTTTCCACGC TTT GCGTGGAAGA           TGTGTATCGGAAAAC  71 242
LQ332_RS04830 1076512 .. 1076547 + -15.5   -5.4505   CCACCGCTTTCCCCT    GACCGGCCGGTACGTC ACCTC GACG-ACCGGCCGTTC    TTTTTTCTTCCCACC 100 24
        ilvC 1077585 .. 1077598 +  -2.4  -3.01712   CACCCGCTTTGCAAG               GTTC CCCCAT GAAC                TCTTCCACACACCGC  41 57
        ilvG NONE
LQ332_RS04845 1079586 .. 1079604 +  -2.2  -3.45742   GTACCGTAGCGACCA             CGGTGCCG GTA CGGAGGCG             TCTTCTTCGTCGTCC  47 47
LQ332_RS04850 NONE
LQ332_RS04855 NONE
LQ332_RS04860 1083117 .. 1083131 +  -2.7  -3.51436   CGCGTGCTCGCACGC               CGCCG CTGAC CGGCC               TCTTTCATCTACATT  47 17
        leuC NONE
        leuD NONE
        leuB 1086316 .. 1086340 + -13.5  -4.03811   ACGCTACAGATATGC          CGCGGCCAGGC CCT GCATGGCTGCG          TTATTTGGTGGTGTA  89 108
LQ332_RS04885 1088256 .. 1088272 + -13.7  -2.78935   GTCTGGAAATCAGCA              GCCACCC ATG GGGTGGC              TCTACTGGGAGATGT  73 143
LQ332_RS04900 1093543 .. 1093561 +  -2.2  -3.58343   GGCACCGGTAAAATG             GCCGGCCC ACT GCGCTGGA             TTTGAACCTCATGAC  50 137
LQ332_RS04905 NONE
LQ332_RS04910 1095621 .. 1095638 + -12.7    -5.252   GCCGGCAACGAAGAA             GCCACCC GCGA GGGTGGC              TTTTTTGTGGGCATG 100 52
LQ332_RS04925 1099472 .. 1099488 + -12.3  -2.64616   TCATGTGCAGCTTGA              TCCACGC CAT GCGTGGA              TGCTCTACATCCGGG  64 59
LQ332_RS04950 NONE
LQ332_RS04955 1107632 .. 1107649 + -14.1  -3.87815   TTGCGTAAACAGAAA             CGCGCCC CGTA GGGCGCG              TTTCTGCAGATCGAA  88 402
LQ332_RS04970 NONE
LQ332_RS04975 NONE
LQ332_RS04980 1116829 .. 1116862 +  -6.6  -3.53012   GGGAACCACAGGCCG     CCGTCGAGCACGGCC TGCAC GGCCTCGC-CGATGG     TTTCGGCAGGGGCCG  55 403
LQ332_RS05005 1121805 .. 1121829 +  -8.5   -3.6284   TTTCGCAAGGAGTCC          GCAGATGATGC TGA GCATCCTCGGC          TTTGGCATGGTCATT  65 95
LQ332_RS05010 NONE
        phbB 1123952 .. 1123991 + -13.4  -4.72986   CCCCACGGAGTGCGC  GGGGCCGGTGAACCTTCG CTTG CGAAGGGAATCCGGCCCC   TTTTTCATCCGGCTG 100 72
LQ332_RS05020 1126625 .. 1126655 + -25.6  -4.07885   CAAAGAAGAGCAAAA       GCAAAGAGCCGGGC ATT GCCCGGCTCTTTGC       TTTTCAAGCGCAATC 100 220
LQ332_RS05035 NONE
LQ332_RS05040 NONE
LQ332_RS05045 1132167 .. 1132184 + -12.7  -2.72799   GCCAACCCTTGCAGC             GCCGAGC CCAT GCTCGGC              TGCTCTATATCACCA  68 91
        grxD 1134030 .. 1134086 + -40.7  -5.00616   TCTGACCCCTAAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GGC ATAAACGACTTAATCCCCTCCGTCCCC TTTTTTCAGCCGGCG 100 82
LQ332_RS05075 NONE
LQ332_RS05080 NONE
LQ332_RS05085 1142556 .. 1142592 +  -2.1  -4.15854   AGCGCAGTCGCTGAA    CAGGGCGTGGCGC ATTTGCCGCGC GCGCCACGCCAGA    TTTTGAGATAGATTT  58 27
LQ332_RS05090 1143599 .. 1143633 +  -7.9  -3.30159   TTGAATGAAGGCCAA    CCGCGGCGGAACTC TGCACATC GA-TTCCACCGCGG     TTGTGCCAGCCTTGC  58 33
LQ332_RS05095 1144438 .. 1144484 + -10.7  -2.71681   TCGCCTTCAGGACCG CTGCCACGGCC-TGCAGGCAGC GGTC GCCGGCGGGATGGCCGTGGCGG TCGTTGAAGGCCTTG  59 456
LQ332_RS05125 1149782 .. 1149807 +  -6.8  -3.20723   CCAGCCCAGCAATGG         CGGCGTCGAT CACTGC ATCGCCGTCG          TTGAGTTGGTAGGCC  50 216
LQ332_RS05135 1151722 .. 1151756 + -21.4  -3.05816   GGCTGATCCCGCACG     GGGTCGGATCCCCGCC ACA GGGGGGGCTCCGACCC     TTGGATCAGGCGTCC 100 35
LQ332_RS05145 1152981 .. 1153008 + -10.6  -2.52543   CATGAGCGATTGGGG        TG-GGTGCCGGCC GTG GGTCGGCACTGCA        TCCCTTACCGCCACT  58 36
LQ332_RS05155 1155090 .. 1155118 + -21.9  -3.44051   CGCAGATGTGGAAAA        GAAAAACCCCGGC AAT GCCGGGGTTTTTC        TTCTGGTAGTGCCGG 100 46
LQ332_RS05165 1157357 .. 1157373 +  -2.1  -2.78463   GGCCGGCGTCGGTCG              CCTGTTC GGT GCCCAGG              TGTCATGACCGGCAT  38 1
LQ332_RS05170 1158212 .. 1158230 + -14.6  -3.09516   ATTTGAGGGGGTTCG             GCAGGGCT TGC AGCCCTGC             TTCGGTAGTGCCGGC  80 35
LQ332_RS05175 1159539 .. 1159555 + -10.1  -3.32343   CGTATGCGTGGGTGC              CGGCGGA GTA TTCGCCG              TTGTGAGGGTGTGCC  67 3
LQ332_RS05185 1161250 .. 1161276 + -10.1  -5.00616   TGCGGTATGTTTCCT        TC-ACGCCGGCG GCTG CGCCGGCGTTGC         TTTTTTCAACGGAGA 100 81
LQ332_RS05190 1162009 .. 1162033 +  -5.5  -3.58343   CATCATTTCCCCCTG          GCTGGCGCCTG GCG CCGGCCCCACC          TTTCCAGATGCTGGA  57 83
LQ332_RS05195 NONE
LQ332_RS05200 1163974 .. 1163989 +    -6  -2.90496   AACGTCTCCTTCGGC              AGGCGC TTGA GCGCCA               TCATTTCCAGCGACA  47 317
LQ332_RS05210 NONE
LQ332_RS05215 1165813 .. 1165839 +  -3.8  -4.62772   TCCTCGCTCAGGATT         TGTAAATAGGAA TAG TTCGTATTAACA         TTTCTTTCGTTTCCG  75 76
        fhuE 1168110 .. 1168135 + -11.8  -3.01712   TGGGCGTTCTGATCA         GACGCGGGGT ACGACC ACCCCGCGCC          TGTTGAGCCGAGCGC  68 29
LQ332_RS05230 1172377 .. 1172394 +  -6.3  -3.02263   GTGGCGATGCGCAGC             T-CCGGCA GGT TGCCGGCA             TGTTCGCCCACCTGT  48 183
LQ332_RS05240 1174890 .. 1174916 +  -6.4  -2.92463   GAGTGAAACGATGAG         CCTGCTGGCCTG GGT CAGGCTGGCCGC         TGTATCCGTAGTGCC  50 97
LQ332_RS05245 1176285 .. 1176311 + -13.6  -2.92389   CACCGACTCCCACGG         GTAGTGCCGGCC GCT GGCCGGCACCCC         TATATCACTGGCTTC  75 65
LQ332_RS05275 1180064 .. 1180076 +  -9.1  -3.48924   GTTGAGCTTGAAGTA                CGGCT GCC AGCCG                TTGTCTGCCAGCTGG  61 354
LQ332_RS05285 1184343 .. 1184355 +  -4.7  -3.14132   GTGCCCTCCCGGGAA                GGGTC AGA GCCCC                TTCCTGCGAAAAGCG  47 177
LQ332_RS05315 NONE
LQ332_RS05320 1194270 .. 1194299 + -20.7  -4.84527   CGAGTCGTGCACGCA       CGCCGGGCCTGGG TCAT TCCGGGCCCGGCG        TTTTTCATGTATAGC 100 61
LQ332_RS05325 1197156 .. 1197175 + -10.6  -3.14132   ACAGCGCGGTCCACA            GCCGCGGC CGCC GCAGCGGC             TTGATCAGCGGCAGC  60 478
LQ332_RS05340 1199180 .. 1199238 + -37.7  -2.72344   CGTACGGTCAGCTGA C-GGATTGCCGGCCAGCGGCCGGCACTA CCGG TAGTGCCGGCCGCTGGCCGGCAGCCCCG TCATTCCAGGTCAAC 100 26
LQ332_RS05350 1200783 .. 1200812 + -14.3  -2.62184   TTGATCCCACCACAC       GGGGA-TGCCGGCC AGC GGCCGGCACTACCC       TGGTATCAGCCCAGC  70 249
LQ332_RS05375 1207265 .. 1207318 + -21.1  -2.74286   GGATCCGACCCCGAT CTGC-CTGGAGTCGGATCCCTTCGGC AAC GCCGAAGGGCTCTGACCCCACCGCAG TGCTTACGACTTCTT 100 201
LQ332_RS05415 1216474 .. 1216491 + -14.1   -4.4078   TCCCGAAACAGAAAA             GGCCGGC ATTT GCCGGCC              TTTTCGTTCACCACG 100 399
LQ332_RS05465 1229616 .. 1229638 +  -9.1  -3.53811   CCGCGCCTTCGGCGC           ACCCCCTTG AGCAA CAAGGGGGC           TTTCCACCCGATGCG  65 71
LQ332_RS05485 1232485 .. 1232502 + -12.7  -5.63517   TGCAACCACAAAAAA             CGGCAGG TTTC CCTGCCG              TTTTTTGTTTCGCGC 100 172
LQ332_RS05500 1235979 .. 1236008 +  -9.2  -3.54543   GTTTAATGAACGCTT       CAGTGCCGGCAC GTTCTA GTGCCGGCAGCG        TTTGCGGCCATCACT  65 67
LQ332_RS05505 NONE
LQ332_RS05510 NONE
LQ332_RS05515 1237314 .. 1237371 + -36.5  -2.90075   CCCTGTAGTGACACT GCCGGCCAGCGGCCGGCACTACCCTCGA TCA TC-AAGGTAGAGCCGGCCGCTGGCCGGC TGTCCTTCAGCCGCG 100 41
        smeT NONE
LQ332_RS05540 1245128 .. 1245145 + -14.1  -4.66537   ACCGCACAAGAAAAA             GGCCGCC TTGC GGCGGCC              TTTTCTGTTGCAGCG 100 40
LQ332_RS05585 1254220 .. 1254237 + -14.1  -4.33754   ACCGGCAAAGAAAAG             CGCCGCC CTCG GGCGGCG              TTTTCCGTTCTGCTT 100 119
LQ332_RS05600 1257532 .. 1257553 +  -6.5  -3.06087   CCGCCCGAGGCTGTA           CGCGGCG TTCGATCT CGCTGCG            TGTTGGCAATGTCTT  51 86
LQ332_RS05630 1261818 .. 1261859 +  -7.9  -3.13403   GCGCCGCGCGGCGTG CCGCC-TCGCGCTGCTGCTG ACG CAGCAGTGGCGTACCGGTGG TGTTGCTGGCACGGC  53 158
LQ332_RS05650 NONE
LQ332_RS05655 1267328 .. 1267338 +  -4.6  -3.61398   CCGGTTTCGGCCACT                 GCCT GCG GGGC                 TTCTTCAAACGCCGC  54 270
LQ332_RS05665 1270132 .. 1270159 +  -2.6  -3.15544   CGCCTCGCGCATCCA        CTGCG-CGGCCTG CAG CACGCCGATGAAG        TTGGTCCCGGTCGAG  43 363
        gloA 1271708 .. 1271738 +  -6.8  -3.16881   GACGGAGGGGATTAA       GCCGTTTCTGGC ACTATTG GCCGGAAGCGAC       TTAATCCCCTCCGTC  51 50
LQ332_RS05680 1272228 .. 1272244 + -15.1  -3.51924   GCCGTGAACGAAGAA              GCCGGGC AAT GCCCGGC              TTCTCTGCATCCAGC  86 51
LQ332_RS05695 NONE
LQ332_RS05700 1277217 .. 1277227 +  -2.4  -3.07043   GCCGTCAACGAGTGA                 GGGC CCG GCCA                 TGTTCGCCTACTACG  42 26
LQ332_RS05705 NONE
LQ332_RS05710 NONE
LQ332_RS05715 1280162 .. 1280185 +  -8.9  -3.18264   GAAGCGGCAACGCCT          GCATGGCCA CGGCTT TGGCTATGC           TTGGTGGGTGGCGCC  59 41
LQ332_RS05720 NONE
LQ332_RS05725 1283044 .. 1283069 +  -8.3  -3.03124   GCATCGCCACTCGCA         GG-TGCATCGGG AAC CCCAATGCAGCC         TCTTCGGCCATCACC  56 102
LQ332_RS05740 1285531 .. 1285549 + -13.1  -3.42996   CGCGCCAAACAAAAA             CGCCGGC ACGGG GCCGGCG             TTCTCATGGATGCTG  78 205
LQ332_RS05790 1294100 .. 1294126 + -13.7  -5.31456   CATCTTCTCTCCTGG        CGCGGCCTCCGG AACA TCGG-GGCCGCG         TTTTTTGTGGGTTGC 100 60
LQ332_RS05810 1299881 .. 1299909 + -18.2  -3.64703   GCTTCACGGATGTAA       CG-CGACGGGCCC TTCG GGGCCCGTCGTCG        TTTCCGTCACCCGCG  93 55
        glpD NONE
        glpK 1303506 .. 1303539 +  -8.2  -2.74523   GCCTTCCACGTCGAT    TGAGGGCAGTGCCGGCC GCT GGCCGGCA--GCCC-CG    TGATCTTCGCAATAC  53 441
LQ332_RS05835 NONE
LQ332_RS05840 1307144 .. 1307168 + -21.5  -2.65116   AAGTTCAAATAAGCA          GAACGGGCGCC CAG GGCGCCCGTTC          CTCTTTCGGTAGTGC 100 29
LQ332_RS05870 1315795 .. 1315832 + -22.9  -3.06737   GACCGGCAGCTCGCG   CCGT-GATCGCGCTGGCG ACC TGCCAGCGCGATCGACGG   TGTTGCGGGTTACTC 100 39
LQ332_RS05880 1316658 .. 1316681 + -19.6  -3.61244   GGCAAGGATGCAACC          GACGCCCGGC CCCC GCCGGGCGTC           TTCATTTGTGCGATC 100 67
LQ332_RS05905 1321845 .. 1321884 +  -4.8  -2.78679   AGCGCCTGCAGGACG  CGCGCTGGC-GCTGAGGCG CTA CTGCTCGGCGGCCATCTCG  ATTTCGCTGACGAAG  45 12
LQ332_RS05915 1324110 .. 1324146 +  -6.5  -3.21099   CAGGCTGCCCAGCAG   CGCAATGC-CCAGGCT CATGCC GGCCTGGCGCAGCGCG    TTCATCGTGGCCGAC  50 288
LQ332_RS05925 1326255 .. 1326279 + -12.2  -2.75064   CCACTTCGATCGACA         GGT-CCGGCAC CGGT GTGCCGGAACC          TCCTTCGCTGGCGAA  63 199
LQ332_RS05945 1330921 .. 1330946 + -10.3  -4.16016   CGTCTGGTTGAACGA         TCGGGGTGGCC GGAA GGCCACCCCAC          TTTCTTGCCACGTAC  79 52
LQ332_RS05955 1332746 .. 1332757 +  -3.6  -3.55622   GAAGCGGAAGTCGCC                CGCG GAAA TGCG                 TTTCCAGCCGTTGAA  51 171
LQ332_RS05970 NONE
LQ332_RS05975 1335206 .. 1335216 +  -6.8  -3.02461   CCCGGATCGATTGCT                 CCTG CAT CAGG                 TGTTCCCGGCAGTTC  48 300
LQ332_RS05985 NONE
LQ332_RS06010 1341262 .. 1341307 +  -8.2  -3.05384   CGACCGAAGAACATC CGCATTGACGGCTGTCCGGTCG CCTG CGACCGG-CGGCCG-CACCACG TTGAATACGACGCCG  57 18
        ribA NONE
LQ332_RS06020 NONE
LQ332_RS06025 1344775 .. 1344787 +  -2.6  -3.05384   CAGGTCGCGCACCCA                GCTG CCGAA CGGC                TTGCGTCGCAACGCG  42 210
LQ332_RS06035 1346876 .. 1346903 +  -3.3  -3.51924   CAGGCCAGGTGCGCC        CTGGGTCGCTG CCCATT CAGCGACATCG         TTGTGTGCATGCCCC  49 323
LQ332_RS06065 1354005 .. 1354028 + -18.2  -3.48395   CCTGACGGTCACATG          CGAAGGCGCC CTAG GGCGCCTTCG           TTGTATCCGGCCGAT  93 132
        dprA NONE
LQ332_RS06075 NONE
LQ332_RS06080 NONE
LQ332_RS06085 1357535 .. 1357568 + -16.1  -3.38317   TCTAATAAGGTGAAA     C-CTGAACGCCCGGCA CAC TACCGGGCGTTCAGCG     TATTGATTTGTCCGT  88 93
LQ332_RS06090 1360146 .. 1360162 +  -6.5  -2.69151   CTGCAAAGAAGTAGA              TGCACGC CAT GCGTGGA              TGCTGTGTCACGCCA  48 27
LQ332_RS06095 NONE
LQ332_RS06100 NONE
LQ332_RS06105 1362375 .. 1362410 +  -8.2  -4.17023   CCGGGGTGACAACCA    TCCGGTCG-TGCCGGCC GCT GGCCGGCAATCGCAGGA    TTTTCAGATGATTGC  72 32
LQ332_RS06115 1363619 .. 1363638 + -16.4  -4.43879   CCCATCAACGAAAAA            CGCCCGGC CTGA GCCGGGCG             TTTTCATTCACTACT 100 82
LQ332_RS06140 1371465 .. 1371517 + -19.1  -3.19192   GGGTCAGAGCCCCTT GGTTATCGGGGCCGGATCCCTTTCC GCA GGAAAGGGCTCTGACCCCGAACGCC TTCGCTTACGTCAGC 100 42
LQ332_RS06155 1374452 .. 1374470 + -10.2  -3.27525   AGTGCCGGCCGCTGG             CCGGCTGC GGC GCGGTCGG             TTCCCTTTCCGCAGG  65 39
LQ332_RS06175 NONE
LQ332_RS21185 1377114 .. 1377151 +  -4.9  -4.16921   GCTGTTCGCCCTCTT   CCAGCTGAGCGGCGAT GTCGTCG ATCACC-TTCGGCTGG   TTTTCCGGGTTCTTC  66 297
LQ332_RS06210 NONE
LQ332_RS06215 NONE
LQ332_RS06235 1389329 .. 1389362 + -23.1  -2.78816   CAACGCAGCGGTCCA     CGGCCGCCGCCGGGC CCTG GCCCGGTGGCGGCCC      TATACTCGACGGTCA 100 46
LQ332_RS06240 NONE
LQ332_RS06245 NONE
LQ332_RS06250 1392686 .. 1392704 +   -16  -2.75963   CTGCACCTGCGGTAG             TGCCGGCC GCT GGCCGGCA             ATTTCAACTGCGGGT  78 61
LQ332_RS06255 1396012 .. 1396027 + -10.4  -2.57132   GCCTCGGCACTGCGC              TGCGCC AGCA GGCGCA               CTTCTGCAGCCACCA  55 439
LQ332_RS06265 1399321 .. 1399336 +  -2.5  -3.20164   CGGCATCCTGCGCGC              CTGCA GCGCAA TGCGG               TTGCCTTCGCTGTCC  44 116
LQ332_RS06275 1400468 .. 1400511 +    -3   -4.2349   GCGGTGACGCTGGTC CG-ATGACGGTAGCGTCGAGC CAT GCTCGACGTTACAAGCGCGCG TTTTCCATGTGCCGC  64 20
LQ332_RS06290 1403361 .. 1403376 +  -4.6  -3.36327   GGCGGCGAACGGCCC              CAGCCA GACC TGGCAG               TTGTCGATGAAGTCC  49 201
LQ332_RS06305 1405251 .. 1405281 +  -7.5  -2.78384   GCCAGCGCACCGCCC      AGGCTGATC-CGGC GTAC GCCGAGGTCGGCCA       TCTCCTGCAGGCGCA  49 213
LQ332_RS06315 1406895 .. 1406924 +  -8.5  -3.39895   CCTTGGGCTGCCCTC       GGTGGGTGCGTAG CGTG CTGCGCACCGAAC        TTCCTTCATCCACGC  60 80
        aroQ 1407683 .. 1407695 + -10.5  -2.79915   TGATTGTCGACCCGG                GCGCC CAC GGCGC                TCTCCTCACCTAGAT  60 38
        accB NONE
        accC 1409609 .. 1409638 + -20.1  -3.19602   GCAGGGACTGGACAC       GGAAAGGGCGGGG ATAT CCCCGCCCTTTTC        TGTTGCTGTGGAGCC 100 47
        prmA NONE
LQ332_RS06350 NONE
         fis NONE
        purH 1421265 .. 1421281 + -15.1  -4.68724   GATCCGCATCACGAA              GCCGGGC CCT GCCCGGC              TTTTCTCTTCCGTAC 100 39
        purD 1422679 .. 1422709 + -19.8  -3.33815   AGAACGCCACCGAAA       AGAAAAGGCCCGGC AGT GCCGGGCCTTTTCA       TTGCTTCAACGCCAT 100 108
        trxA NONE
         rho 1431784 .. 1431804 +   -14  -6.11644   CTGCGTCGGAAGAAA            CCTGCCGC TCGCT GCGGCAGG            TTTTTTTTTGCCTGC 100 50
LQ332_RS06440 1433922 .. 1433954 +  -9.2   -3.0976   GCTGGTCGCGCATCT     TGGCCATGATC-CGC TCCG GCGCGACCATGGTCA      TGTTCACCTGTTCGG  55 404
LQ332_RS06510 1448324 .. 1448348 + -17.1  -2.64616   GTGGCCGTCGCGGTG          GTGGCCCGCGC TGA GCGCAGGCCAC          TGATCTCCCTCGCGC  81 12
LQ332_RS06515 1451666 .. 1451694 +  -7.3  -3.14132   GCCCCGCTGCTGCGG        GGGGCCGCGCG ATGAACC TGTCCGGCCCC        TTCATCCGCCGCCCG  55 46
LQ332_RS06520 1454810 .. 1454826 + -15.1  -3.57144   CATAGCTCTGGTAGC              GCCGGCC GCT GGCCGGC              TTTGCCGATGCGCCG  87 36
        yccS NONE
LQ332_RS06530 1460563 .. 1460588 +  -2.5  -2.52464   AGTATCTGACTGTAA         CCGCATACATGC AGC GCAGGT-TGAGG         TAGATTACGCACCCA  37 157
LQ332_RS06535 NONE
LQ332_RS06540 1461272 .. 1461297 + -20.5  -3.20382   ACTGATCCGCGTGGA         CGGATCCGGCG CCTG CGCCGGATCCG          TTGCTGCATGTCCGC 100 36
LQ332_RS06545 1461746 .. 1461769 +    -8  -3.93695   GCTTCCAGCCAACGG          CGCAGCCCCT CGTG ATGGGCGGCG           TTTGTCGATCATGGG  67 41
LQ332_RS06575 1466676 .. 1466707 +  -8.7  -2.60212   GCATCCGCATCAGCC     CCCGG-GCACA-CCG GCAG CGGCTGAGCACCGGG      CTTGTCGCATAATGG  53 2
LQ332_RS06580 1468615 .. 1468625 +  -2.4  -2.63596   CCTGAACTTCGACTT                 CCAC AAC GCGG                 TGCTCTGACGTGCCG  38 7
LQ332_RS06585 1470843 .. 1470857 +  -8.5   -2.7898   CTGGCACAGCATCGC               GCCGG CCAGT CCGGC               TGATTCACTCTTCCA  55 8
LQ332_RS06605 NONE
LQ332_RS06610 1472744 .. 1472789 + -28.1  -2.79133   TCCGGGGCAGCCAAA TTAAAAGCAAAAGGCCAGATC GAAA GATCTGGCCTTTTGCTTTTAA TCTGGTCGCGCATTC 100 28
        coq7 1475107 .. 1475123 +  -6.5  -4.15044   TAGATCCAGGGCATG              GGTGGGG GCT CCTTACC              TTTCTTGGGAAAACA  68 403
         crp NONE
LQ332_RS06645 1478018 .. 1478054 +  -3.1  -4.81852   GGAATAGGCGATATC  GATGTCGCCATAGCCGCG CTCG CGCAGC-AT-GCG-CATC   TTTTCTTCGTTGTGG  79 313
LQ332_RS06700 1487548 .. 1487575 + -16.3  -3.29144   TCGACTGATCCCCTG        CGCCCCCCGGCC GGAAA GGC-GGGGGGCG        TTCTGAACGCGGTAG  89 33
LQ332_RS06705 1488255 .. 1488276 +  -7.9  -3.72576   GCGCTACTGACCTTG           CGGTGGCCG ACAG TGGCCGTCG            TTTCCTGAACGGGCG  65 31
LQ332_RS06710 NONE
LQ332_RS06715 NONE
LQ332_RS06720 NONE
LQ332_RS06725 1493815 .. 1493842 +  -3.4  -4.15565   CGCCGTTACGAGGCG        CCGTTGATGGAGA TCT TC-CCATGACCGG        TTTTGAAGTCATCCA  60 2
LQ332_RS06730 NONE
LQ332_RS06735 1494555 .. 1494575 + -12.5  -2.94099   TCAGAGGCGATGAGG            TTGCCGGCC AGC GGCCGGCAC            TATCTCATGCCGCGC  68 75
LQ332_RS06750 1497093 .. 1497122 +  -6.4  -3.55444   GGCCGGCGGCCAGCG       CCTGTGCGGTCGG GCGGA TC-ACCGCGCGGG       TTTCGAACATGAAGG  57 181
LQ332_RS06765 1500220 .. 1500248 +  -2.9  -3.83026   GGCCGGCAGCAGAAC        AGTGGCTGGGCGA TTG TCGTCCGCCCCCC        TTTGATCTGCCGGGC  56 103
LQ332_RS06770 1501580 .. 1501597 +  -4.1  -3.27774   CCTCCCGTAGATCCA             CGCCA CGCGCGGA TGGCG              TTCATGCTTCAGCTC  47 31
        pdhA NONE
LQ332_RS06800 1508589 .. 1508615 +  -7.2  -3.31322   GGCCAAGCGCGCGGT        GGC-GGCCGGC TGACAT GCGGGCCCGCC         TTCTGGGGGCTTACC  55 13
LQ332_RS06805 NONE
LQ332_RS06810 1510376 .. 1510394 + -17.4  -5.60993   CCTGTGAAACACGAA             CGCCGGGC ATT GCCCGGCG             TTTTTTTATGCCCGC 100 51
LQ332_RS06830 1514326 .. 1514343 + -14.1  -3.53224   CAGACCACGACCGAA             GGCGGCG ATGG CGCCGCC              TTTGCGCGACAGGTA  76 348
LQ332_RS06840 1516904 .. 1516915 +  -2.2  -3.43756   CATTGGCGAAACAGC                CGTA TTCA TGCG                 CTTTTTAATGCAATC  47 43
LQ332_RS06845 1519339 .. 1519392 + -20.5  -2.50195   CCGCGATCTGCCGGA TGCTCGTGGGGTCAGATCCGTTTTCC GGA GGCAAACGGATCTGACCCCA-GCACA CTGTTGCTGCTGAGT  91 129
LQ332_RS06860 NONE
LQ332_RS06865 1524089 .. 1524106 +  -3.3  -3.32844   CATGCGCTGGAAAGG             CTGTTCG GGTT CGGGCGG              TTGTGACCTGCAGCC  47 2
LQ332_RS06870 1524793 .. 1524828 +  -8.2  -3.05596   TGTCGACCTTGCATG    TGCCGGTGGTGTCGAC CTTG GTCGACACGCTCTGCA     TTCCGTGCCGGCCTG  57 101
LQ332_RS06880 NONE
LQ332_RS06885 NONE
LQ332_RS06890 1527861 .. 1527876 +  -3.2  -2.52516   CCCAGTAGGCGTCGA              CATTGG CCAA CCAACG               GTTGGTACTGCCGGC  39 166
        speE 1532142 .. 1532163 + -17.3   -5.1861   TGATCCAAACAAAAA           CCCGCGCTG GCGA CAGCGCGGG            TTTTTTCATGCTCCG 100 38
LQ332_RS06915 1534208 .. 1534221 +  -5.2   -3.0464   CTATAAGTGGGCCAA               GCGC CGGTAA GCGC                TGTTCGCCCTGCATT  47 16
LQ332_RS06920 1534968 .. 1534999 +  -2.2  -3.14132   CGGTCGTCCCCCCTC      ATTCCG-CCCGGT TGATCTC ACCGGGACGGCAC      TTCATCGCACACGGG  42 11
LQ332_RS06930 1535895 .. 1535917 +    -9   -3.6512   GCCGCAGAATGAAAA           AAGGAGGCGC ACT GCGCCTCCCG           TTTACAGATTATTTC  65 29
         arr 1536796 .. 1536809 +  -3.7  -3.85864   CACGAGGGACCTGCG               GGCTC AGCT GCGCC                TTCTTCTCATACTCA  58 369
LQ332_RS06960 1541724 .. 1541742 +  -2.2  -3.67602   GCGACCCAAGGACTG             AGCGCGCT TAT GGCGCGGA             GTTTTTTGCCTGTGT  50 25
LQ332_RS06965 1542409 .. 1542428 +  -5.6  -3.72141   TGACGGAAACCGAGC            CGTCTTCC AGCA GGCGGACG             TTTACATATGCATCT  58 134
LQ332_RS06980 1546420 .. 1546474 +   -10  -3.01712   GCCAGCAGCGCCACC CGACGGCTGACCAGCGCGT-GCAGCT CCGCC AGCTCCGACGCCC-GGCCAGCCGTCA TGTTGCCGCCGAACA  59 402
LQ332_RS07005 1551280 .. 1551296 + -10.9  -2.76468   AGTCGACAGGGTAGA              GTCGACT GTT AGTCGAC              TGCTCTTCGCTGCTC  62 67
LQ332_RS07020 NONE
LQ332_RS07025 1555805 .. 1555837 +   -22  -2.55351   AGGCGTTGAGTGGTG      CCCCGGCCGGCTGG CTCTC CTGGCCGGCCGGGG      ATTGGTGTGCCGAGG 100 40
LQ332_RS07045 NONE
LQ332_RS07050 NONE
LQ332_RS07055 1563451 .. 1563476 + -16.1  -2.96695   CCCATCAACGGAAAA         AGCCGGCCGGA TCGC TCCGGCCGGCC          TCCTTTACTACACGC  81 368
LQ332_RS07075 1567720 .. 1567737 + -11.3  -3.28712   GGATTCATGCGGGTT             CGGCATG TGCT CATGCCG              TTATCCAAGCCGGGC  68 405
LQ332_RS07095 NONE
LQ332_RS07100 NONE
LQ332_RS07105 1572300 .. 1572334 +  -3.5  -3.18264   ACAGCGGATCCTGCG    GGATTGTCTGCAGCAG ATCG CCGC-GCAGGCAGTGC     TTCATGCGTCGGCCG  45 322
LQ332_RS07130 NONE
LQ332_RS07135 NONE
LQ332_RS07140 1584250 .. 1584267 +  -5.5  -2.72036   GCAGCTTCGGCTGCC             GGCGTTC CTGC GAACGGC              TAATCTCTACCTTTC  46 5
LQ332_RS07145 NONE
LQ332_RS07150 1586221 .. 1586242 + -10.9  -4.25283   GGCTGCGTTCTTGTA           G-AGCCGAGC CAT GCTCGGCTGC           TTTTCGTACCGACAT  88 42
LQ332_RS07155 1588194 .. 1588214 + -13.9  -3.01791   GTCGACCTTGGTCGA            CCTCCGCGC GTA GCGCGGTGG            TGTTGGCGCGCCCGT  75 43
        bioB NONE
        bioF NONE
        bioH NONE
LQ332_RS07195 NONE
        bioC 1596486 .. 1596514 + -10.1  -2.71731   CAGACCTGATCGCCC        GGTCGTGCCGGCC GCT GGCCGGCACCTCA        TGATTCCCCGGTGGA  59 32
LQ332_RS07215 1599493 .. 1599521 + -22.5  -3.86194   CGGCACCTCTGAAGA        CAGACGGCCCCGC AGT GCGGGGCCGTTTG        TTTCTGGGGCACGTT 100 198
        mnmG 1602166 .. 1602185 +  -6.4  -3.05596   CCCAGGTGATCGCGC            GTGGCCAGG GCA TC-GGCCAC            TTCAGTGAAGGCCTG  48 419
        baeS NONE
LQ332_RS07245 1609921 .. 1609943 +  -3.2  -2.67016   GTAGCGCCGGCCGCT           GGCCGGCAAC CTC GTGGCACGCC           TGGATTTCCGTGGTT  40 44
LQ332_RS07250 1610851 .. 1610870 + -11.4  -2.82516   CCGAGCACGCGCCTG            CGTAGGCG ACCG CGCCTGCG             TCTGGTAGTGCCGGC  64 21
LQ332_RS07255 1611553 .. 1611565 + -10.5  -2.80443   GGCTGAGCGGCCAAC                GCCGC CAT GCGGC                TCTGCTAAAGTCTGG  60 35
LQ332_RS07260 NONE
LQ332_RS07265 NONE
LQ332_RS07270 1614936 .. 1614962 +  -6.5  -3.42996   GCTGCGCCAGCAGTA        CAGGTGGCTGGC ATGA GCCCG-CGCCTG         TTCTGGTCGCTGCTG  57 10
LQ332_RS07275 NONE
LQ332_RS07280 NONE
LQ332_RS07285 1618530 .. 1618548 + -13.8  -3.06183   TCTACCAAAAACAGT             TGCCGGCC AAC GGCCGGCG             TTACCTACCCCTGCA  76 145
        ilvD 1623223 .. 1623279 + -37.1  -4.56597   CGGCATCTGGAAAAT GGGGACGGAGGGGATTAAGTCGTTT GTGCCTA AAACGACTTAATCCCCTCCGTCCCC TTTTTGCCGGCCAGC 100 69
LQ332_RS07325 1627727 .. 1627738 +  -3.6  -3.72576   ATGGCGCCCGCGAAG                GGGT CAGA GCCC                 TTTCCTGCGGAAAGG  54 58
LQ332_RS07350 1631170 .. 1631180 +  -4.6  -3.50853   CGGCACTACCGGAGG                 GCGT TCA GCGC                 TTGTACTTCGGCACG  53 176
LQ332_RS07375 1637625 .. 1637667 +   -17  -2.55544   ATGATGGCCGCGGGC CCA-CCCGGCCACCACCCC TTGTGC GGGGCGGTGGCCGGGATGC TAGATTGCATCCTCG  81 60
LQ332_RS07380 1638857 .. 1638888 + -16.7  -3.53224   TCCGCCCCGCAATGA      CG-ACAAGGCCCGG CATGT CCGGGCCTTGTCCG      TTTCAGCGGGCACTG  91 77
LQ332_RS07390 1639999 .. 1640025 +  -9.4  -3.03554   CGCCCGCGCGGTACG         GGGAGGGCTG ACGTATC CAGCACTCCC         TCTATCCTTCCTTAC  59 15
LQ332_RS07395 1640512 .. 1640536 + -18.6  -3.83026   CAATCCTGAAAACAA          CGAGGCCCGG AATGA CCGGGCCTCG          TTTCATATCCGCCGG  95 32
LQ332_RS07420 1646033 .. 1646063 +  -7.4  -3.05463   GCGGGAAGGGCTTCA       CATGCGCAGTCACG GAT CGGCACTGCGCGGG       TTCCGTCGCCCGCAT  55 76
LQ332_RS07425 1647430 .. 1647450 +   -14  -3.58343   GTGAAGCCGCTCCCA            GGCGACGC CATCC GCGTCGCC            TTTCAAAGTAATCCG  84 109
LQ332_RS07430 1648693 .. 1648719 + -15.1  -3.57561   ACTGAAGCCAGGGCA         CCGGGGGCGGC GTAGG GTCGCCTCCGG         TTTCCAGGGTTGCCG  87 36
LQ332_RS07440 NONE
LQ332_RS07445 1651517 .. 1651538 + -14.5    -4.564   GAAGCGTTCCCTGTA           GAGCCAAGC CGAT GCTTGGCTC            TTTTCGTTTCGGATT 100 100
LQ332_RS07450 1652462 .. 1652495 +  -2.3  -3.50853   CCACCACGAGGGGCA     CCGCCGTTG-GCCGCA ATC TCCGGCACAATCGCAG     TTCTGATTCCCCCAG  47 149
        panE NONE
LQ332_RS07460 1654340 .. 1654373 + -11.7  -2.78384   GCCTGCGCGACCTGC     TCCGGTAGTGCCGGCC GCT GGCCGGCAAT-CAGGA     TGTGCTGCCGGCCAG  62 18
        hrpB NONE
LQ332_RS07480 1658968 .. 1658995 + -18.4  -4.12532   CAGGGCAGCGCATGA        GGGCCGGACGCC GCAA GGCCTCCGGCCC         TTTCTGTCTCAACCG 100 83
LQ332_RS07500 1662382 .. 1662409 + -14.8  -4.56914   TCCGAGGCCTGACGA        CGCCCTCGGAAC GCAA GTCCCGGGGGCG         TTTTCGTTTGCGTCG 100 409
LQ332_RS07505 1663038 .. 1663064 +  -6.5  -3.06492   CACCGAAGGCTCCGC        GCGCGGACCGTC CGCC GATGG-CCGCCC         TCTTCCGCTGCCTGC  51 237
LQ332_RS07510 NONE
LQ332_RS07515 1666025 .. 1666046 + -11.5  -3.22476   TCTCGATCTGCACCC           CGCGCTGCT GCAT GGCGGCGCG            TTCCTCATCGGTGAT  64 468
LQ332_RS07530 1669436 .. 1669452 +  -7.2  -2.62184   CGCACCCACCAGGGC              CCGCGG CGGAC CTGCGG              TCGTATACGGCGGCG  47 129
        dkgB 1670547 .. 1670563 +    -5  -3.41073   CATAGAAAACCGGCA              GCCCCC AGCGC GCGGGC              TCTTTCAATCACCTG  52 208
LQ332_RS07550 1673914 .. 1673931 +  -9.1  -2.62184   GCCGCAGGAAGACGT             CCGCACCG AGG CGG-GCGG             TCATGTCGCGCACGC  51 236
LQ332_RS07560 1675197 .. 1675218 +  -6.5  -3.55444   TAATCGGCATCGGCG           TGC-AGGCGC ACC GCGCCGAGCA           TTTCGCCACTGCGCG  57 376
LQ332_RS07575 NONE
LQ332_RS07715 NONE
LQ332_RS07720 NONE
LQ332_RS07725 1710159 .. 1710194 +  -7.5  -3.91541   GCTTCCACTGACTCC   CACCCGGC-GTGCGCGG GTCC CCG-GCACCGCCCGGCG    TTCTTCCTTTGATCG  67 30
LQ332_RS07730 NONE
        hemF 1712805 .. 1712829 + -16.4  -3.30771   TGGCTCTGATCTTCC          GGCGCCGCGC CTGAC GCGTGGCGCC          TTCTCGCGCCTGTGG  90 32
LQ332_RS07740 1714700 .. 1714725 +  -5.4  -2.71144   GCTCCATGCGCCGAT         TGCGGGTGGTC AACCA GCCCACCC-CA         TAGTTCAGCACGATC  43 310
LQ332_RS07755 1718916 .. 1718935 +  -5.6  -3.25823   CCCCTTCCTCGCGGT            CGGCCTTG TACT CGGGGCTG             TTCATGTAACCCACG  49 449
LQ332_RS07810 1729474 .. 1729515 +  -2.1  -2.78679   AGGTAGGTGTGGAAC TGGCGGCCGCTGAGCTGGCC ATC GATCAGTTCGACGGCA-CCG ATTTCGATCACCCGA  39 433
LQ332_RS07825 1731148 .. 1731159 +  -3.6  -3.53012   CCGAACGATGTGGTG                GGGT CAGA GCCC                 TTTCCGGAGGAAAGG  49 136
LQ332_RS07830 1731624 .. 1731648 +  -3.4  -3.64703   CGGGCGTGAGTTGAG         CGCG-TCCCGC GATT GCGGGCTCCCG          TTTCACTCACAACCG  51 32
LQ332_RS07835 NONE
LQ332_RS07840 NONE
LQ332_RS07845 1737512 .. 1737527 + -10.4  -2.78463   GGCAGCGGCACCGAG              CCCTGC TTGA GCAGGG               TGTCATGGAACCCCT  56 188
LQ332_RS07895 1746070 .. 1746094 + -11.4  -3.34013   GCAGATGTTCCAGAA         C-GGGCCCGGC AATC GTCGGGCCCCG          TTCGTTCAACCGATC  70 68
         acs NONE
LQ332_RS07925 1755159 .. 1755181 +  -3.2  -2.71144   CAACGTCAGGTTGGG           CGCGAGCGCG AGC CGTGCGTCCG           TCCTTGCCCGACCTC  40 377
LQ332_RS07930 1755845 .. 1755861 + -12.3  -2.78596   CTACCAGACGTCACA              TCCACGC ATG GCGTGGA              TCTACTGCCGGGCTG  65 87
LQ332_RS07965 NONE
LQ332_RS07970 1773437 .. 1773461 +  -9.2  -2.69964   AAACAGGGATAATCG         GCGGCACGGGC AAGC GCCCG-GCCCC          TCCTGTCCTTCCCGG  56 29
LQ332_RS07975 1774634 .. 1774651 +  -4.7  -3.36289   CACGAAGATGCCGAC             GATCGCG TAGC CGCGGCC              TTCCTTGAACTGCTG  49 265
        hemH NONE
LQ332_RS08005 1778934 .. 1778962 + -12.4  -3.07104   GGCCCTTGCGCCCGC       TGCACGCGGGCCC GGTC GGGCCTGCG-GCG        TGTGTCTGGTTCTGC  69 96
LQ332_RS08010 1781289 .. 1781307 + -17.4  -6.24157   GCACGTTGAGGAAAA             CGGCGCCC GCA GGGCGCCG             TTTTTTTTTATGGCT 100 55
LQ332_RS08065 1794446 .. 1794466 +  -8.9  -3.27525   GTGCGGATGCGGTTG            TGCTGCCCG GCA TGGGCAGCC            TTCACTTTGCCCAGC  59 147
LQ332_RS08095 1802142 .. 1802161 +  -6.4  -2.85351   GCGCGCGGCGGGCGC            CGCCTG GAGCGGGA CAGGCG             TATGCTGTCGCGCCC  49 473
LQ332_RS08105 1803026 .. 1803058 + -19.9  -3.07113   CATGAACCCCGCCCA      TGGGTAGTGCCGGCC GCT GGCCGGCATTTCCCA      TTCGATCGGGTCATG 100 76
LQ332_RS08130 1810871 .. 1810898 + -13.4  -3.62859   GCTGCTGCCGGACGC        TGCCGCTGCCGT GCAC ACGCCAGCGGCG         TTTGCCCGTTGTCGT  81 45
LQ332_RS08135 NONE
LQ332_RS08140 NONE
LQ332_RS08145 NONE
LQ332_RS08150 1815617 .. 1815655 + -16.6  -2.62184   ACAGCCCCCGTTGCC   GGGGTCGGATCCTTCGCC GCA GGCGAAGGCGCTGCCCCC   TGCTCTGCACAGGAA  81 60
LQ332_RS08155 1816254 .. 1816288 +  -9.3   -3.6502   GCTTCCGCACCCAGC    CGCCAGGCCAGGCC ACCCAACC GGC-TGGCGTGGCG     TTTCAATGCGGCCTG  63 204
LQ332_RS08175 NONE
LQ332_RS08180 NONE
        mlaD NONE
LQ332_RS08190 NONE
LQ332_RS08195 NONE
LQ332_RS08200 1829387 .. 1829414 + -18.6  -4.14739   CCTGCATCGGTGCAT        GAAAAACCCCGC CTCG GCGGGGTTTTTC         TTTTCCGCTGGGTGC 100 44
LQ332_RS08220 1832889 .. 1832905 +  -2.1  -3.53091   TTCCAGCACGATCTT              GCCCTTG GCG CGGTGGC              TTTCCAGCAGCGCGT  47 114
LQ332_RS08230 NONE
        leuE 1835805 .. 1835845 +  -9.1  -2.70932   CGAACCCCTGCGCCA TGCCGAGCCCGGCCAGCACG GCGC CGTG--GGCCAG-CTCGGCA TCGTTGAACACCAGC  52 250
LQ332_RS08245 1837721 .. 1837741 +  -8.9  -3.33492   GGGCATGGCAGGCAG            GGCGGGCTA TGC TGGCCCCCC            TTCTGCAATGGATGC  60 41
LQ332_RS08250 1838191 .. 1838207 +  -2.9  -3.89614   CTGACGTCGCCCGGC              GCGGG GGTCCGG CCTGC              TTTATGCCGATTCCG  56 37
LQ332_RS08255 1839858 .. 1839873 + -11.8  -3.64716   GCCGGCACGACCGAA              GGGCGG TCAA CCGCCC               TGTTTTGCCGCGTAA  77 112
LQ332_RS08270 1843840 .. 1843869 +    -7  -3.51232   TGGGATTGTCCCGCC       GGCCGCCTCCAC TCTCCC GTTGCGGTGGCC        TTGGTTTCGCGCCAG  57 68
LQ332_RS08275 1845111 .. 1845128 +  -4.7  -3.16564   GCATTGCGCGCGCTG             TCGGCGC CCTT GCGCAGG              TTGCTGGGCTGGAAG  47 462
        dnaA 1854496 .. 1854538 +  -8.2  -3.59262   ATCGCAGCAGATTTA TCCACAGCTTTCCCCACCCC TTG GGGGTCGGTAATGCAGAGGG TTTCGAGGTCTGAAA  65 132
        dnaN 1855797 .. 1855817 + -18.3  -5.86332   CGTGGAACCAGACGA            CGCCCGGGA TTT TCCCGGGCG            TTTTTTTTAGGTTCC 100 57
        recF 1857854 .. 1857865 +  -2.2   -3.9941   CGGCTGGTATAATTC                GGGT TGGA ATCC                 TTTCATTCTCGGCAC  57 66
        gyrB 1860400 .. 1860427 + -16.3  -2.94912   ACACAATCGGCAGCC        GGCCGGTGCGC GGGGAG GCGCACCGGTC         TCTGTCCCTTGAACG  85 40
LQ332_RS08330 NONE
LQ332_RS08335 1862233 .. 1862255 +  -2.6  -4.84359   CTCACGCCATCTGTT           TCTGATACGT TTG GCGGCTCAGA           TTTTTCTGACAGTCC  74 82
LQ332_RS08340 1863515 .. 1863551 + -16.6  -2.56475   TAAGTAGGAATAACG    CCTGAACGCCTGCTCA GTTGA TGCGCAGGCGCTCAGG    ATTGGTATAAGCTTG  81 38
LQ332_RS08345 1864341 .. 1864351 +  -2.4  -3.33911   GGCCCTCCGGCCACC                 CCCG CTC CCGG                 TTCGATTGTTTAGCT  45 52
        exbB 1865217 .. 1865232 +  -2.6  -2.66748   GTAGTCACCAAGATC              TAGACGG AGC CCGT-TA              TGGCTTTCAGTAGTG  38 72
LQ332_RS08355 NONE
LQ332_RS08360 1866115 .. 1866134 +   -15  -5.84432   TGACGCGACTGCAGA            CGCCCCTG GAGA CAGGGGCG             TTTTTTTGTGTTCTC 100 66
         cls 1867679 .. 1867692 +  -4.5  -2.62184   CGAGGCCTTCGCCCG               GCTGGC CTC GCC-GC               TGCTGTGACGCAGCG  41 4
LQ332_RS08370 NONE
LQ332_RS08375 NONE
LQ332_RS08380 1869936 .. 1869946 +  -2.4  -3.17622   CCGAAGAAGGAGTCG                 CCGC AGG GCAG                 TCTATTCTAGGGCTC  44 5
LQ332_RS08385 NONE
LQ332_RS08390 1870903 .. 1870915 +  -3.4  -3.06302   ATGGTCCAGGTCCAG                TGCT GAGAA AGCA                TTGACTGGAGGTCCT  43 59
LQ332_RS08395 1871396 .. 1871410 +  -4.9  -2.70932   CCGGGGCGAGCTGGT               CGGTG TCCAC CGCCG               TGGTTACGACGCGAG  44 57
LQ332_RS08400 1872362 .. 1872378 +  -6.5  -2.73364   ACAGGAACTCGGTTT              CGCCTTC GTC GAAGTCG              TCGTTGAGGTAGAGC  46 297
LQ332_RS08420 1878146 .. 1878201 +   -16  -3.04792   CGCGGCGCTTGAGCG GGCTTTCCTGG-CCGCCACGATGGCGG TCG CCGCCATCCTTGCGGTCCTGGGCCGCC TGTTCAGCCTCGTGC  78 420
LQ332_RS08430 1879003 .. 1879025 +  -3.2  -2.90813   CATGTGCGTAGAACC           CACGTGCACG GCA CGGACACGGG           TGGTTTACGCCCGTC  41 113
LQ332_RS08435 NONE
        ligD 1882798 .. 1882810 +  -4.8  -3.28712   GGCGAGATCCCAGCC                CAGC TGCAC GCTG                TTGTCGCCAGGCGCC  49 336
LQ332_RS08465 1888949 .. 1888981 + -21.4  -2.78816   ACAAGTTCTGAGCAA     TGCCGGCGGCGCGCA CCGG TGCGCGCCGCCG-CA      TGTCGTGACCGCTGC 100 30
LQ332_RS08490 NONE
LQ332_RS08495 NONE
LQ332_RS08500 NONE
LQ332_RS08505 NONE
LQ332_RS08510 NONE
LQ332_RS08515 1902713 .. 1902732 +  -2.8  -3.25823   CTGATCGTCCGCGAT            TCCTGCCAG CCG CCGG-AGGA            TTGATCTCCCCCGGG  45 2
        kduI NONE
        kduD 1904622 .. 1904640 + -12.4  -3.02461   CGTGAGCCACGGCAG             TGCCGGTC GCT GGCCGGCA             TCTTCGCGAGGCTTC  68 43
LQ332_RS08530 1905822 .. 1905839 +  -8.4  -2.80935   CGCTGAGCCTGTAGA             GCCGAG GCCATG CTCGGC              TGTCCTGCATCCGGT  55 35
LQ332_RS08545 1908258 .. 1908273 + -11.8  -4.19238   GCGGATCTGCGGCAT              GGCCGC CATC GCGGCC               TTTTCGCCTTCCAGG  82 203
LQ332_RS08560 1912819 .. 1912847 + -16.7  -4.25104   GCGGTAGTGCAATGA        AGAAGGGCCGGCG CAA TGCCGGCCCTTCC        TTTTGATGCGCGACC 100 51
LQ332_RS08565 NONE
LQ332_RS08570 1914543 .. 1914566 +  -5.2  -3.37796   CGTTACAGCGCGCTC          TGCGG-GCGGA TCT TCAGCACCGCG          TTCTCGGTGGTGCAG  51 54
LQ332_RS08580 NONE
LQ332_RS08585 1917734 .. 1917756 + -20.6  -2.53015   CTGAGCAAGGGTGCA           GCGGGCCGGA ACC TCCGGCCCGC           TGCATTGCAGCCTGT  91 37
LQ332_RS08595 NONE
LQ332_RS08600 NONE
        mutM 1921209 .. 1921245 +  -6.6  -4.07868   GGCAGCCAGCGGCAG   C-TGAACGGGCAG-GGCG CGT CTCCGCTGCCCGTTAACG   TTTGTCTGCCTATCA  68 45
LQ332_RS08610 1923102 .. 1923125 +  -5.8  -3.44622   CCATCCCACGGAATG          CGGCTCTGGC TTTG GCCGTTGCCG           TTGCTTCTGCAGGTG  55 227
LQ332_RS08620 1925946 .. 1925999 +    -5  -3.67597   CCCATTGAAAGCGAA CGCCTGCGCCTGCGCCGGATCG ATCCTGACCG CGACGCGGTGCCGATGCTGGCG TTGTTGAATGACCCC  55 101
LQ332_RS08635 NONE
        pyrF 1928893 .. 1928931 +   -11  -3.88787   CGGTCACGCCGGCAC   CACGAACGCCATTCCG ATCCATG CGGGATGGCGTTCGCA   TTTGTCCGCCTGTGA  79 56
LQ332_RS08645 1930039 .. 1930066 +  -8.5  -5.61596   TCGTGCCGGCTTGAA        GAGCCTGCGATC CCCGT GATC-CGGGCTC        TTTTTTTATCCCGGT 100 162
LQ332_RS08650 NONE
        plsB 1933974 .. 1933989 +  -7.5  -3.17723   CTTCAGCTGCAGCTT              GCGCC GCTTCA GGCGC               TTGGCTTCCAGCTCA  53 191
        ttcA NONE
LQ332_RS08670 1936069 .. 1936111 + -11.1  -2.81133   AGGCTGACTGAACAC GCACCTCAT-GGGCCGCCGG TCAT CCGGCGGCCCGAAGCAGCGC TATGCTGGGTGCATG  64 30
LQ332_RS08675 1937166 .. 1937177 +  -7.2  -3.60151   AATCCACCCCGCCCG                GCCG AGCA CGGC                 TTCTGATTTGAACGA  59 288
LQ332_RS08685 1940906 .. 1940922 +  -2.1  -3.07816   ACCACGTCCGCCTCC              AGCAGCG ATT CACTGCC              TTCGATCGGTACGGC  41 261
LQ332_RS08705 1948382 .. 1948394 + -10.5  -3.05816   CTTTCTCGATGGTCA                GGCGG TCG CCGCC                TTCACTGGCCGGTGG  59 66
LQ332_RS08715 NONE
LQ332_RS08720 1950439 .. 1950483 +    -2  -3.05384   ATCGGCCAGACGCTC GGCCGACCACATGCGTGCACGC GCG GCGT-CATCCAGCAGG-CGGCC TTCGGTCAGCGCGAC  41 293
LQ332_RS08730 NONE
LQ332_RS08735 1954320 .. 1954346 + -10.8  -3.16564   CGCCTACTGCCCGAC         CAGCGCCAGCGT CTC GCGTTCGCGCTG         TTCCTCGCGTACCAG  63 485
LQ332_RS08755 1958582 .. 1958592 +  -6.8  -3.17586   GGGTTCCTCAATCGG                 TGGC GCT GCCA                 TGTTCCTGCGTTCGT  54 55
LQ332_RS08760 1959295 .. 1959311 + -12.3  -2.69799   GAGGGAGCTGGTAGA              TCCACGC CAT GCGTGGA              TGCTGTGTGCGATCC  65 54
LQ332_RS08810 1973118 .. 1973172 + -32.3  -3.19522   CTGAACCGCCGGTAG TGCCGGCCGCTGGCCGGCACCGATT GCCAG GATGGATGCCGGCCAGCGGCCGGCA TTACCTGTTCCGTGG 100 37
LQ332_RS08820 1978024 .. 1978049 +  -2.6  -4.66833   CTGACCCCATGCGCT         CAAGAGCG GCCAGCCAAG CGCTTTTG          TTTTTGCGCTTCCAC  70 368
LQ332_RS08830 NONE
LQ332_RS08835 NONE
LQ332_RS08840 NONE
LQ332_RS08845 NONE
LQ332_RS08850 1983972 .. 1983997 +  -6.9  -3.33492   AGAACCCAGCGTTCC         CTGCCGATTGCC CCG GTCAAT-GGCAG         TTATGGCCTAAATCG  55 66
LQ332_RS08855 NONE
LQ332_RS08860 1985903 .. 1985916 +  -5.2  -2.79492   GCACGGGCGCGCAGG               CCGC TACAAT GCGG                GTTTGCCCTTGAACC  45 45
LQ332_RS08865 NONE
LQ332_RS08870 1988642 .. 1988674 + -17.8  -2.78816   GCTGAGGCGGCATGA     CGGGTCG-TGCCGGCC GCT GGCCGGCAACG-CCCG     TGTGCTGCCGGATCC  87 36
        glnA 1992122 .. 1992171 + -20.8  -4.09685   ACTACGCCAGCTGAC CGGGCGCGATGGCGGTGGGT TCCCCCTCCC ACCCGCCGCCATCGCTTCCG TTTTCGCGGCTGGGG 100 27
LQ332_RS08890 NONE
         amt 1994292 .. 1994312 + -16.9  -3.48668   GCATTGATGTTGTGG            GTGCCGACC GTT GGTCGGCAC            TTCTACTGTCCTGGT  91 59
LQ332_RS08900 1995001 .. 1995022 + -11.5  -2.79133   TCTGGATCAGGACGA           CCTGTCCCG TTGT CGGGGCGGG            TGTCGTCCCAGATTC  64 97
LQ332_RS08905 NONE
LQ332_RS08910 1995791 .. 1995804 +  -2.3  -3.15078   GTGCTGGTCCGGGAT               ATCGC GACC GCGAC                TCTTCATCGCCTGTG  42 50
LQ332_RS08915 1996643 .. 1996661 +  -4.5   -2.6563   CGGCACTCCACCATG             GCGGCAT GATCG ATTCCGC             TACCTTCTTCAAGCG  41 88
LQ332_RS08920 1997815 .. 1997830 +  -2.4  -2.52464   CCCCTGCCGAACTGA              ACCGGC AAGG GTCGGA               TCCCTTCCAAAGGAA  37 26
LQ332_RS08925 1998297 .. 1998310 +  -8.1  -4.46615   CGCCCCCGGGCCAAG               GCTGG TCGG CCAGC                TTTTCCTTGGTCATC  79 86
LQ332_RS08935 1998813 .. 1998833 +  -3.1  -2.79492   ACAGGCCCTGGGCAA            GGCGTCAGC ACC GCTGGATCC            GTTTAACCTTCCGGC  41 41
LQ332_RS08940 NONE
LQ332_RS08945 2003724 .. 2003734 +  -3.2  -3.25823   ATGCCTGAGGGGAGC                 GCAT GTC GTGC                 TTAATGTCGGCAAAG  45 11
LQ332_RS08950 NONE
LQ332_RS08955 2007056 .. 2007086 + -15.4  -3.90112   TATATAGCATTTGCA       GCCGGGACGGCCGA TCT TTGATCGTCCCGGC       TTTAATTCGGAGGCG  93 490
LQ332_RS08960 2008231 .. 2008247 +  -3.5  -4.30987   TGGACTATGGCGGTT              CGTGCCG GGC CGGCTGG              TTTGTTCTGGCGAGT  64 118
LQ332_RS08965 2009727 .. 2009751 +  -2.7  -3.97834   GGGCTAAGGATGGTT          TGAACAGCTCG CGG TGGGCAGTGCA          TTTCTGGTCCGGTTC  57 110
LQ332_RS08975 NONE
        ntrC 2013783 .. 2013796 +  -2.3  -3.14931   CTCGCACCCGCTTGC               CGAAC TGTT GATCG                TTCATGGACGATGCA  42 60
LQ332_RS08985 2014391 .. 2014415 +    -5  -3.05596   CGCATCGCCTGTGGC         GTGATCCG-GG TCGT CCGCTGATCAC          TTCACTGCAGGCATC  47 5
LQ332_RS08990 2015084 .. 2015107 + -18.2  -4.09519   CCCGTAAGCATCAAG          GAACGCCGGC GCAA GCCGGCGTTC           TTCTTTATCGGTAGT 100 34
LQ332_RS09000 2018269 .. 2018293 + -15.7  -5.09895   GCAGCGCGGGTACGA          AAACGCCGCCC AAT GGGCGGCGTTC          TTTTTTGCATCGGTG 100 69
LQ332_RS09020 NONE
LQ332_RS09025 2022492 .. 2022503 +  -7.2  -3.29511   AAGGGGCAGTGACGG                GCCG CGTC CGGC                 TTGTGCGACAATCGG  54 29
LQ332_RS09030 2022995 .. 2023007 +  -4.7  -3.49653   CTGATTGTCGCAGGT                GGCGG ATC CGGCC                TTGTCTGGGCCTGAT  53 37
        secB NONE
LQ332_RS09040 2024658 .. 2024676 + -13.1  -5.08824   AAGTGAATCGAAAAA             CCCCGGC CACGT GCCGGGG             TTTTTTACGTGCGCG 100 35
LQ332_RS09050 2025690 .. 2025730 +    -9  -3.28712   CGGTATCGCCTTCGG TGTGGAACGCGAGCC-GTTC GTA GAGCCGGCGCGCGG-CCACA TTCTCCCAGGCGACA  59 77
LQ332_RS09075 2033689 .. 2033706 +  -4.7  -3.28712   CTGCCACCGTGACCG             TGCCCGC GATG GCGGCCG              TTGTGCCGCCACCGC  49 29
LQ332_RS09080 2034724 .. 2034746 +  -9.1  -3.57462   TGACGCTCTGGCCAA          GGC-TGGCCG TCGG CGGCCGCGCC           TTTGCCGATGCGGTG  63 265
LQ332_RS09090 2036308 .. 2036322 +    -7  -4.07455   GCGCCGTTACTTGCT               CGCGCG CCG CGCGCC               TTTCTCGTCTTCATC  68 345
LQ332_RS09110 2038852 .. 2038866 +  -5.6  -2.87132   CAGCCAGATACGGGG               CTGACG CGA CGCCAG               TATCTCCGCGCGGCC  47 22
LQ332_RS09145 2044240 .. 2044268 + -10.2   -4.4009   TCTCCCACACGCCAA        CCGAAGCCCGGC CTCGC GCCGGGCTTCAC        TTTTATGGGCTCCGG  88 87
LQ332_RS09150 2045060 .. 2045072 +  -3.3   -3.3761   TGCGCCTGGAGTGGG                GGCAA TGA TGGCC                GTTTTGTTCAAGACC  47 18
LQ332_RS09155 NONE
LQ332_RS09160 NONE
LQ332_RS09165 2047082 .. 2047098 + -13.7  -2.85351   ACGTTGCCCGTAGCA              GCCACGC ATG GCGTGGC              TCTACTGTGCCGCCA  73 115
LQ332_RS09170 2047592 .. 2047648 + -13.7   -3.1352   CCCTGACCCCATAGA TCCACGCCATGCGTGGATG--GCGTGC CGATT GCCCGCAACAGCCACGCATGGCGCGGC TCTATTGCGTTGCCA  76 27
LQ332_RS09200 2057407 .. 2057422 +  -8.2  -3.03124   GAACGCGCGCTGCAT              GGCCTG CTGC CGGGCC               TGTTCCGGCGTGGCC  55 313
LQ332_RS09215 2060861 .. 2060878 +  -8.3  -4.59212   GGTGCGCAGCACCGG             CTCGCCG ATGG CGGCGCG              TTTCTTTGGTTACTT  88 213
LQ332_RS09230 NONE
LQ332_RS09235 2065742 .. 2065764 +    -4  -4.18762   ATGCGGTGAAAGCCC           GGGGGTTATA GAA TAGCGCCCCC           TTTTGCCTGAGCCTT  62 77
LQ332_RS09240 2066867 .. 2066885 +   -16  -3.87815   TTTCCAAGTGTCCAG             GGGCCGGT TCT ACCGGCCC             TTTCTACAGGTGCGA  93 83
LQ332_RS09245 2067946 .. 2067958 +  -2.6  -3.31144   CGGATCCAGGCCATA                GGCG ATGCG TGCC                TTGTCGCACTGCGGG  45 176
LQ332_RS09255 NONE
LQ332_RS09260 2071073 .. 2071098 +  -3.1  -2.58618   AAGGCTCGACCACCC         GCGAGGAGC-GC CAT GCTGCACTACGC         CATTATTTTCTTTGT  39 95
LQ332_RS09265 2071248 .. 2071266 +   -16  -2.64155   GAGGCTAGCCGGTAG             TGCCGGCC GCT GGCCGGCA             TCGCTTTCCGCAGAG  77 33
LQ332_RS09275 NONE
        ubiB NONE
LQ332_RS09285 2075794 .. 2075827 +  -5.1  -3.05384   AGCAATCCAACTGCC     CGGAG-GCAGCCGGCC AGC GGCCGGCTCTACCCCA     TTCAGTGCCCAGCCC  47 95
LQ332_RS09290 2076937 .. 2076968 +  -4.5  -4.68655   TGGTTCCAGATGTAT     TGGGG-A--GCCGGCC AGC GGCCGGCACTACCTCA     TTTCTTTTCCGGTTC  75 363
        arfB NONE
LQ332_RS09315 2079051 .. 2079061 +  -2.4  -3.13773   GTATCCATACCGTCT                 GCCC AAG GAGC                 GTTTTACATGTCGCG  42 118
         dcp 2081253 .. 2081271 + -17.4  -4.88407   GTACGAAAGAAATAA             CGGCGGGG AAA CCCCGCCG             TTTTTCGTTGCGTGG 100 53
        lepB 2083179 .. 2083198 + -10.7  -3.06796   GATCGACTGGATCGA            CGGGCCT AGTCTG AGGCCCG             TTCCCTCCCATGCCC  63 88
LQ332_RS09340 2084566 .. 2084582 + -10.9  -2.75992   GGTTGCCGAGGTAGA              GTCGACT GTT AGTCGAC              TGCTCTTCCATCAGA  62 92
        aceB NONE
        aceA 2090026 .. 2090059 + -22.5  -3.51924   CAGGGAAGGGCCAGA     CAACGCCGGCCGGTC GGGG GACCTGCCGGCGTTG      TTGTATCGATGCAAG 100 145
LQ332_RS09365 NONE
LQ332_RS09370 2094254 .. 2094270 +  -7.9  -3.24747   GCACATCGCTAAAGT              TGGCCGC GCT GCGGTCG              TTGCTGCTATGCCGG  57 411
LQ332_RS09380 2095717 .. 2095736 +  -4.3  -3.05596   AGCAGGCTGCCGGCG            TCGG-CCA CGGCA TGGTCCGA            TTCACTGACCGGATC  43 265
LQ332_RS09400 2101084 .. 2101100 + -15.1  -3.71552   CGGTAATCCGGTAGC              GCCGGCC GCT GGCCGGC              TTCTGTTGCTGGGGT  89 27
LQ332_RS09405 2102110 .. 2102127 + -14.1  -3.71649   CCACCAAGCTCAAAA             CCCCGCC TGCA GGCGGGG              TTTCGCATTTCAGGG  86 338
LQ332_RS09410 2103827 .. 2103842 +    -6  -4.78981   TGCACAGCACCGGCT              CGCGGC TGGC GGCGCG               TTTCTTTTGGTTACT  82 227
LQ332_RS09420 NONE
        zapE 2106888 .. 2106914 +  -3.7  -3.61268   TTGTTCCGTTTTTGC        GGTG-CGTTGTG CCAC CGCAATGACGCC         TTTCGGGCTTGACTG  53 317
LQ332_RS09430 NONE
LQ332_RS09435 2110807 .. 2110838 +   -21  -4.05033   TCAGGCCTGTCGCAA      CGAGAAACCCCGGC CAAT GCCGGGGTTTTTCG       TTTCTGTGGCGTCGA 100 50
LQ332_RS09445 2112130 .. 2112140 +  -8.2  -2.50016   CCGACTTCATCGACC                 GCGC CCA GCGC                 CTGTTCGTGCTGACC  52 113
LQ332_RS09455 2114145 .. 2114175 + -10.2  -3.01712   CGCTGAGGCTCACAC       CCGCCAGGCCGGCG CCA TGCCGGCCCGCAGG       TGTTCGAACAGCGCG  62 35
        purU 2116419 .. 2116435 +  -4.3  -4.33258   GCGAGGTGACCAAGG              CGCAGTG CCA CTTTGCG              TTTCTGTTTCAGGGT  67 428
LQ332_RS09495 2123315 .. 2123335 +  -7.5  -3.36273   ACCCCGATCTACTGA            GCGCGATCG ATA CAATCGTGC            TTCATGTTGCAGGGA  58 26
LQ332_RS09500 2123800 .. 2123816 + -12.3  -2.64155   TCTGGGACTAGTAGA              TCCACGC CAC GCGTGGA              TGCATTTCGCGCACC  64 30
LQ332_RS09510 NONE
LQ332_RS09515 NONE
LQ332_RS09520 NONE
LQ332_RS09525 NONE
        mmsB 2131039 .. 2131073 + -17.3  -5.44119   ACAACGAAGGTGGGA    TGGGCGGATGTTCGGT TTCG ACCG-GCATCCGCCCA     TTTTTTTGGGGTGGG 100 88
LQ332_RS09545 NONE
LQ332_RS09550 2135924 .. 2135936 +  -9.1  -2.89881   AAACTATTGATCTCA                CTGGC AAT GCCAG                TCTCTGCGATCACTA  58 109
        dusA 2137108 .. 2137136 +  -7.3  -4.08767   TTTGTAAAAGGCCGG        GTCCCGAACCCGG CAT CCGGATTCACGAC        TTTTGAACGAATCGC  71 172
LQ332_RS09560 NONE
LQ332_RS09565 NONE
LQ332_RS09570 2139817 .. 2139847 +   -11  -3.07043   TGCCATCGAAGAGCA       TGAGGGTGCCGGCC AGC GGCCGGCACTACCG       TATTGCGATGCTGGG  66 86
        birA NONE
LQ332_RS09590 NONE
LQ332_RS09595 NONE
LQ332_RS09600 2143750 .. 2143770 + -18.3   -5.1287   GGTTTCAACAAAAAA            GGCCAGCGC GGG GCGCTGGCC            TTTTTTGCGTCTACC 100 73
LQ332_RS09680 2154449 .. 2154473 +   -15  -3.85817   AGGCAGAAACAGAAA         GGGCGCCCACG GAAA CG-GGGCGCCC          TTTGTCCACGGCGCT  91 266
LQ332_RS09805 NONE
LQ332_RS09810 NONE
LQ332_RS09815 NONE
LQ332_RS09820 2175202 .. 2175217 + -11.8  -4.33417   CACAGCCCACCACAA              GCCGCC TACG GGCGGC               TTTCTTGTGCCTGGA  95 53
LQ332_RS09830 NONE
LQ332_RS09835 2179205 .. 2179235 +   -14  -2.78384   CCACCGCAGCGCGAT      CCCGG-CGGGCGG CGGCCA CCGCCTGGCCGGG       TGTGCTGGCGGGCCC  67 441
LQ332_RS09845 2180843 .. 2180880 +   -12  -2.51815   GCGTTGGCGTATGTC   CGGAAC-GGGGCAACGC AGCAC GCATTGCCCCTGTCCCG   CTATTGCTGATTCAC  64 59
        rocF NONE
LQ332_RS09860 2182851 .. 2182870 + -16.4  -5.24129   GTTGGAAAACGAGAA            GGCCGGGG ATTT CCCCGGCC             TTTTTTCTGCGCGGC 100 52
LQ332_RS09865 2183274 .. 2183308 + -18.7  -3.48276   GCTTACCCCCCACAG    CACGACGCCCGC-ACC GTGA GGTCGCGGGCGTTGTG     TTGTCTGGGCCGGGC  93 50
LQ332_RS09875 2185525 .. 2185557 +  -8.3  -3.40597   GTGCTGCGCGAAGAA      TAAAGGTCGTGCCAG CGG CTGGCACGACCACGG      TATTTGCATAGGAAA  60 23
LQ332_RS09880 2186056 .. 2186070 +  -4.2  -3.08073   CCCGGGCCGCCCGCG               CGCCTA CCA TGGGTG               TCTGTTCCCGATCCT  45 127
LQ332_RS09885 2187129 .. 2187145 +  -2.9  -3.19117   TAGCCGTGGTATTGC              CGTGAAT CCG ATGCGCG              TGTTGCTGCTGTCGT  45 121
LQ332_RS09890 2188792 .. 2188821 + -14.3  -2.73875   GCGGCCCGCCGTTGA       GGTAG-TGCCGGCC GCT GGCCGGCAACTCCC       TGCTCTTCCCGGAGG  71 26
        yedA NONE
        rarD 2192710 .. 2192735 + -16.2  -2.71364   GCCTTCGCGCAAAAA         GAACGGCGCC CCGAAA GGCGCCGTTC          TGCTTCCAGCCATGG  78 95
LQ332_RS21195 NONE
LQ332_RS09935 NONE
LQ332_RS09940 2199765 .. 2199781 + -13.7  -3.08471   CCGCCAGAGCGCGAG              CCGTCGC TAC GCGACGG              TTCCCTGCGCTTCTC  76 154
LQ332_RS09990 2209524 .. 2209562 + -24.6  -2.71712   GTAATCGCGCCGTGA   CCGAAGGCCCTGCCGCCC ACC GGGTGGCGGGGCCTTCGC   GTTTCCGGGGCAGGG 100 37
LQ332_RS09995 2210481 .. 2210528 + -19.1  -3.06162   CGATCCAGGAAAACA CCACCGTCTCCTCCGGCGTGG CTTTCA CCGCGCCGAAGAAGTCGGTGG TCTTGCCGTGCGGTA  85 202
LQ332_RS10005 2211570 .. 2211603 + -18.9  -3.54424   CCGCGCTGCAGACGC     TTCGACAGGCCCGGC ATTC GCCGGGCCTGTTGCA      TTTGCGGGGATGCAA 100 60
LQ332_RS10010 2212724 .. 2212738 +  -3.5   -2.5547   CAGCTTGGCGGCGTC               GTCGA TGCGT TCGGC               CTTGATCTGGAGAAT  40 338
LQ332_RS10020 2213666 .. 2213678 +  -9.1  -3.51032   ACGCTGGGAGCTGGC                GCTGC AGG GCAGC                TTCTAGTTCGACGAT  65 7
LQ332_RS10030 2216116 .. 2216127 +  -7.2  -2.93901   GGCCGTCGAGGAAGT                GCGC CAGC GCGC                 TGTCGTTCATCGCCT  50 281
LQ332_RS10040 2217247 .. 2217263 + -15.1  -4.87291   CAGGAACAGAAAAAA              GCCGGGC ACT GCCCGGC              TTTTTCATTCAGATC 100 75
LQ332_RS10065 NONE
LQ332_RS10070 2222414 .. 2222445 +    -6  -3.73813   GCGGAATGCGCATGG      GTGACATGGCAGA ACGACTA TTTGCCA-GTCAC      TTCTATTCCTGATTG  60 261
LQ332_RS10080 2223976 .. 2223989 +  -2.3  -3.21276   TGCCCTGACTTTCGT               CTGGC CTTG GCGAG                TCTTATCCGCGCGGA  44 339
LQ332_RS10095 NONE
LQ332_RS10100 2233959 .. 2233972 +  -8.1  -2.52676   TCAACCAATGACCGT               CTCCG GTCG CGGAG                TCGATTGGCCGCCTA  50 254
LQ332_RS10105 2234995 .. 2235024 +    -5  -2.83012   GGCATCTCCCAGTTT       GCGTTCATTCTG GAGGCG TAGGATGCACGC        TGTGCTGGTCACATT  45 5
LQ332_RS10110 2236839 .. 2236855 +  -5.1  -3.65046   AACGCGCCCACTGCG              AGTGATC GCT GATCACC              TTCTTCAACTAACAG  55 395
       coaBC 2241827 .. 2241845 +    -3  -3.53444   CGCGCGGAGACTCCA             GGCATGAC CCA GGCATCCC             TTTCCCAACCGCTGC  49 19
         dut NONE
LQ332_RS10150 2244648 .. 2244658 +  -8.2  -3.32294   CGGTGCTGGGCGATA                 CCCC GCT GGGG                 TTCTGACCCCTTTGC  60 9
LQ332_RS10195 NONE
LQ332_RS10200 2256479 .. 2256504 +  -8.9  -2.52464   CGGACTGCGGGATCA         TCGCCCCCGACG CGC CGA-GGGGGCGG         TGCCTTGCGAACGGG  52 54
LQ332_RS10205 2256847 .. 2256859 +  -9.1  -3.34398   TGGCTTGCGCGAAGC                CGAGC TGG GCTCG                TCTTTACAACAGCGC  64 113
        tyrS 2260948 .. 2260974 + -23.8  -3.89346   GCTGCCTGAGACAAA         GGAAGGGCCGGC GCA GCCGGCCCTTCC         TTTGTAGAGTCGAGC 100 32
LQ332_RS10225 2263024 .. 2263037 +  -5.9  -3.02511   GAGCAAAGACAGCAT               CGTCC TGTC GGGCG                TCTTCACAAAGTACC  48 42
LQ332_RS10230 2263189 .. 2263209 +  -7.6  -2.91582   CATGTTCGAGTTTGT            TCCGGAAA GAGTA TTTCCGGG            TCTGTAGCTCAGGTG  54 39
LQ332_RS10235 2263412 .. 2263425 +  -6.7  -4.33621   GTGAGGCTAAGGCGA               GAGAC GCAA GTCTC                TTTATTGATTGAGTC  75 154
LQ332_RS10240 2266394 .. 2266407 +  -3.1  -2.71924   CTTGACCATATAACC               TCAAG TTGC CTTGG                CTTTACGACAACGTC  40 32
         rrf 2266637 .. 2266670 + -17.5  -5.40474   GCCAGGGTTTACACC     CGAGAACCCCGCTGC TTGC GCAGCGGGGTTTTCC      TTTTTTTGCAGGCAT 100 34
LQ332_RS10250 2268691 .. 2268704 +  -5.9  -3.02511   GAGCAAAGACAGCAT               CGTCC TGTC GGGCG                TCTTCACAAAGTACC  48 42
LQ332_RS10255 2268856 .. 2268876 +  -7.6  -2.91582   CATGTTCGAGTTTGT            TCCGGAAA GAGTA TTTCCGGG            TCTGTAGCTCAGGTG  54 39
LQ332_RS10260 2269079 .. 2269092 +  -6.7  -4.33621   GTGAGGCTAAGGCGA               GAGAC ATAA GTCTC                TTTATTGATTGAGTC  75 154
LQ332_RS10265 2272060 .. 2272073 +  -3.1  -2.71924   CTTGACCATATAACC               TCAAG TTGC CTTGG                CTTTACGACAGCGTC  40 32
         rrf 2272308 .. 2272329 + -17.3  -5.38054   GGTTTACACCCAAAA           CCCCGCTGC TCAC GCAGCGGGG            TTTTTCTTTGTGCGC 100 39
LQ332_RS10285 2276487 .. 2276512 +  -2.6   -2.7185   GGCTCGCCGCATGCA         CGGC-GGATTC AACGG GAATTTAGCCG         TGCTTCGCGCATAAT  38 46
LQ332_RS10290 2278037 .. 2278067 +  -5.3  -3.13403   CGGCCAAGCCCTGAC      GGTAG-C-GCCGGGC CGT GCCCGGCGGACGCCC      TGTTCATCCGCAAGG  47 27
LQ332_RS10295 2278987 .. 2279019 +  -6.1  -2.66316   CCAGATACGCGCCGA      TCAGCGCCGACACCG CGC CGCTGGCGCCGATGA      TGATCTGGTCCGGGC  45 483
LQ332_RS10305 2281102 .. 2281121 + -16.4  -5.53991   ACGCAGCACACGGAG            GGCCCCGC GCGA GCGGGGCC             TTTTTTTCGTCAATG 100 57
        pnuC NONE
LQ332_RS10320 2285158 .. 2285173 + -11.8  -4.56978   GCAAGGCACAAAAAA              CCCCGC GTTC GCGGGG               TTTCTTGTTTGCCGC 100 84
LQ332_RS10330 NONE
        coxB 2290164 .. 2290175 +  -2.2  -2.58427   GGCCGCCCGCGGCCG                TGGT GACA ACCG                 ATTCTGAGAGGTGTT  38 53
        ctaD NONE
LQ332_RS10345 NONE
LQ332_RS10350 NONE
LQ332_RS10355 2293527 .. 2293562 + -10.3  -3.72695   CTACGTGCTTTGATC    CCG-GCGGCTGCGGCG TCAGC CGCCGATGCCGTGCGG    TTTGATCCAGCCCAT  74 28
LQ332_RS10365 NONE
LQ332_RS10370 NONE
LQ332_RS10375 NONE
        cyoE 2297552 .. 2297585 +  -9.5  -3.61398   GCCGCCGGCGAACAG     GACCTTGGCAATCGG CACG CCGGTGGCCAGGCTC      TTCTTCGAGCCGCAG  67 293
        tsaD 2304072 .. 2304100 + -18.9  -3.63744   GACGTTGAGAGGTAC        CAAAGGGCCCCGC CCA GCAGGGCCCTTTG        TCTTTTCCGGGCCGC 100 320
        folB 2304591 .. 2304611 + -12.5  -3.13403   CCGGAAACCCCGGTA            GTGCCGGCC GCT GGCCGGCAA            TCTTGGTAACAACGA  69 61
LQ332_RS10425 2305993 .. 2306017 +  -7.1  -3.36518   ACCTCTCGCAAAATC          GCCCGGGAT CGCTAGA ATGCCGGGC          TTGTAAACGTTTTCA  55 101
LQ332_RS10430 2308231 .. 2308287 + -39.9  -5.22006   CCTGATCAAGAAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GCC ACTAACGACTTAATCCCCTCCGTCCCC TTTTTGTTGTCCTCA 100 36
LQ332_RS10435 2309361 .. 2309374 +  -9.5  -2.62263   ACCGAAGTGAAGGTC               CCCCG CGTG CGGGG                TCGTCTGGCAAGGGT  55 476
        yiaA 2311378 .. 2311391 +  -9.5  -2.60075   CTGCGCCCATTCCAG               GCGGC TGCG GCCGC                GTTCGTTGGCCCAGC  55 151
LQ332_RS10480 NONE
LQ332_RS10485 NONE
LQ332_RS10490 NONE
LQ332_RS10495 2324685 .. 2324707 +    -4  -3.59087   GTGCTTTAGGGTTTG           TTGGCAGGGG GCG CCCTCGACAA           TTTCCCGCTGCTCTT  53 32
LQ332_RS10500 NONE
LQ332_RS10505 2325955 .. 2325978 +   -21  -4.63527   GACCGGTGCATGGAA          CCCGGGCGGC GGTG GCCGCCCGGG           TTTTTCCCGTCATCG 100 60
LQ332_RS10510 NONE
LQ332_RS10515 2327326 .. 2327360 +  -7.6  -2.79321   CACCCTTCCAGGCAT     CAGGAGGTTGCCGGCC AGC GGCAGGCACTCCCCGG     TCATGTTGCTCTGCA  52 64
LQ332_RS10520 2329099 .. 2329131 + -11.9  -3.06183   CTGCGCGCGCTTGCG      CGGGGTCAGGCCG CGCAGGT CGGCCAGGCCCTG      TTCGGTGACGATCAC  62 312
        glnE 2334101 .. 2334131 +    -8  -3.19157   GCCGATCCACGCCAC       CCGGCGCGCCGGGC CCG GGCCGAAGCGACGG       TTGATCAGGTTGCTG  53 472
LQ332_RS10560 2338295 .. 2338319 + -17.1  -3.15249   CGCTGTATCGGTTTC          GGGCCCGCCGT CGT GCGGCGGGCTC          TTGCTGCACCGTGTA  85 43
LQ332_RS10565 2339102 .. 2339127 + -19.1   -5.0538   CGTCGTGAGAAGGCA         GAAGGCCCGCT GAAA AGCGGGCCTTC          TTTTTTGGGGTGCGG 100 56
LQ332_RS10575 2340720 .. 2340756 + -10.2  -3.76224   CCGGCACTACCCTTC   GGA-GG-GCGTGCGGACC AAC GGTCCGCACCTACCGTCC   TTTGATCAATCGCCG  74 57
        aceE NONE
LQ332_RS10595 NONE
LQ332_RS10600 2348898 .. 2348913 +  -2.4  -3.53444   ATTAGAGGGCAGCTA              CGGCCG GAAG CGGTGG               TTCGTTGTTCCGCAC  47 513
LQ332_RS10630 NONE
LQ332_RS10635 2355812 .. 2355828 +  -5.1  -4.46112   TGCCGCTTGATCCTT              CATTTGC CGG GCACATG              TTTCTTTCGCTGACG  74 135
LQ332_RS10640 NONE
LQ332_RS10645 2358091 .. 2358110 + -13.6  -4.05446   TTCCCGCGTGAAGAA            GGCAGGGT GCAG ACCCTGCC             TTTCTCGTTGCCGGG  93 70
LQ332_RS10650 NONE
LQ332_RS10655 2360086 .. 2360140 +  -6.4  -3.28712   CGCCACGGCCGTCGG CATCATCG-CGCGCAGGTGCG-CCGGG TTGG CCGGGTCGC-CCTGCACCACGAAGATG TTGTGCCCGGCCGGG  52 236
LQ332_RS10670 NONE
LQ332_RS10675 2362275 .. 2362299 +  -7.2  -3.25223   GCCCGACTCCCACCA         CG-GC-GCAACG TCG CGTTGCTGCACG         TTGATCGTCTCGATC  55 174
LQ332_RS10685 NONE
LQ332_RS10690 2364829 .. 2364844 +  -3.2  -3.61398   TTCACGCGGCACGTC              GC-GGCC GCT GGTCAGC              TTGTTCGGCGCGCCG  51 119
LQ332_RS10715 2367636 .. 2367654 +   -16  -3.06915   CGAAGCTCATGAGGG             TGCCGGCC AGC GGCCGGCA             TTACCTGGCGTGGAT  82 81
LQ332_RS10725 2368985 .. 2369018 +  -9.5  -3.18199   GCTACGGCAAATGAC     CAGGTAG-TGCCGGCC GCT GGCCGGCAACTGCAGG     TTGCCTTCCCCGTTC  62 27
LQ332_RS10735 2371118 .. 2371137 +  -3.4  -3.54424   GCCGGATCGGCATAC            AGCACGCT GGCC AGCGCGCC             TTTCACCCGCTCGCC  51 318
LQ332_RS10750 NONE
LQ332_RS10755 2376228 .. 2376262 + -17.8  -3.07816   GGCGCCGGTCACGGG     TCAGGTGGTGCCGGCC AGC GGCCGGCACTGCCGGG     TTGCCTCACTCCAGC  88 40
        cycA NONE
LQ332_RS10770 2380908 .. 2380941 + -14.5  -2.90194   AACTGCAGCAGCGCC     TGCGCGGCCTTGCCG TAGC CGGCGAGGCCTGGCA      TGTCATTCACGGCCT  72 465
LQ332_RS10780 2384617 .. 2384630 +  -9.5  -3.29459   CGTGCGCCAGGCAGT               CGCGC ATCA GCGCG                TTGAATTCTTCGGTG  63 326
LQ332_RS10790 NONE
LQ332_RS10795 2386137 .. 2386166 +  -2.8  -4.07568   CCCGGCAGCTCCGGA       CTGCCGCC-TGAA ACGGC TTCATGGCGTCCG       TTTTCAGGGGGCCAG  60 15
LQ332_RS10800 NONE
LQ332_RS10805 NONE
LQ332_RS10810 2387805 .. 2387828 +  -4.4   -3.0894   GCCGGGCTGACCGCC          GCCGCAAGGG AGAA CCCTCATGGC           TTACGTGGATGCTTA  45 31
LQ332_RS10815 2388188 .. 2388210 +  -3.2  -2.66316   AAGCGTGAGCCATGG           CGCTTGTGCG GGC CGGGCGTGCG           TGCTGTGATCGGCGC  40 33
LQ332_RS10820 2389543 .. 2389564 + -11.5  -3.09987   CTATGTTTCGCGCCC           AGCGGACGC ATCA GCGTCCGCA            TTCCATGCGTATTGA  66 80
LQ332_RS10825 NONE
LQ332_RS10830 2391945 .. 2391962 +  -9.1  -2.87132   TTCACCGATTCCCCG             CGTGCCGC ACC GCGGC-CG             TCTCTCCCAAAGGAC  58 88
LQ332_RS10835 2392636 .. 2392656 +  -3.9  -2.79133   AGGTGCCGTCGAACG            CCGATTCGA TGC TCGACTCGA            TCTGATCCGAGGTTC  43 0
LQ332_RS10840 2394346 .. 2394399 + -32.1  -4.29738   CACGCCCAAGCAACA CACAGATGGGGTCAGATCCCTTTCCC GCC GGGAAAGGGATCTGACCCCTTC-GTG TTTTCGTCCGTGTCG 100 41
LQ332_RS10845 2396291 .. 2396309 + -17.4  -3.65199   TGCCGCCCCCGGAAA             CGCCGGGC CGT GCCCGGCG             TTTCCATAACGGCTT  93 74
LQ332_RS10850 NONE
LQ332_RS10855 NONE
LQ332_RS10860 2398997 .. 2399009 + -10.5  -2.86271   GCGCAGTTCGCGCTT                GGCGG TGA CCGCC                TGCTTGTAGTCCAGC  57 205
LQ332_RS10870 2400719 .. 2400732 +  -2.3  -3.72576   TGGTAGGAGCCGACC               CGGGT CGGC ACGCG                TTTCGTGCGGCACCG  53 35
LQ332_RS10880 NONE
LQ332_RS10885 2403981 .. 2404012 + -12.2  -3.05384   CGGCCGCCACCTGAA      ATGAAACGGGCGCC TTGC GGCGCCCGTTCCGG       TTACATCACCACACC  69 83
LQ332_RS10895 2409649 .. 2409680 +  -4.3  -3.65046   GGATCACGCCCATGC      CGGCGAT-CGCCGC TTCGC GCAGCACGTCGCCG      TTGTTGGCGTGCAGC  51 306
LQ332_RS10905 NONE
LQ332_RS10910 2411680 .. 2411727 +  -4.6  -5.07107   GGGCATGAGCCGGGG CTGACGCGCGGCGGCTGCGGCCG TCG CGGCCAGGGCCGCA-TGTGGTAG TTTTTTCCGGGTTTC  85 33
LQ332_RS10915 2413447 .. 2413487 +  -8.2   -2.5001   GCGAATGACCGTGTA CCCCGGGTGG-GTGCGGAC CTTG GTCCGCACACCGTTCAGGC  CTTACTCCGGCTTCT  52 33
LQ332_RS10925 2414383 .. 2414405 + -14.1  -3.16564   TGAGCAATGGGCCGA           TCCGCCGGG CACGA CCCGGCGGG           TTGATCCGCTGAGGA  76 38
LQ332_RS10955 2418444 .. 2418476 + -12.6  -3.16881   CTGCCGGACCAACGT      GGCCGTGCGCCGGC ATTCC GCCGCCGCATGTCC      TTCGTCCACTGGATC  69 132
LQ332_RS10960 2419113 .. 2419154 + -12.9  -3.05463   GAGCCGGCGCACGCG CTCGGTGCACGGGGTGGTC GACA GGCCGACCCGTTCACCCAG  TTCGGTGAAGGAAAT  66 488
LQ332_RS10970 NONE
         alr 2421884 .. 2421903 +   -10  -3.01791   CAGGCGCTTCTCGTA            GCG-CAGCG GAT CGCTGTCGC            TCTTCAGCCCCAGGT  59 165
LQ332_RS10985 NONE
LQ332_RS10990 2425068 .. 2425081 +  -9.5  -3.61398   GTCGCTTCGAACCGG               CGCGC GTAG GCGCG                TTCTTCCGCCACCCG  67 145
LQ332_RS11000 NONE
LQ332_RS11005 NONE
LQ332_RS11010 2427984 .. 2428005 +  -7.3  -3.48593   ACCGAAGCCGAAGCT           GTTGGACAT CACC GTGTCCAGC            TTCTGTGCGCGGCTC  58 114
        dinB 2431110 .. 2431138 + -11.7  -3.42147   CCCCGCAACCGGACC        CACCTCGCCATCC CAC GGATGGCCAGCTG        TTGCTGTTGCTTCGG  70 193
LQ332_RS11040 NONE
LQ332_RS11045 2434713 .. 2434743 +  -3.2  -3.47841   CCAGCGGCGTACAAT      GGG-CGGCCCC ACGTCGTGCA GGTGCCGTCCC       TTGTCGTATCCCTAT  49 59
         gph 2435545 .. 2435600 + -17.6  -2.93089   GCAACCCCGAGGACG TCGCCGAAGGTCATGATGTTGCCGCCC GCT GGCCGGCACCACCATGACCGTC-GCGG TCATTTCGGCTGGTA  88 164
LQ332_RS11060 2438973 .. 2438989 +  -9.3  -2.59748   CACGCTAGAATGAAG              CGCCCCG TCG CGGGGCA              TCAGTTCTGGAAGTG  55 33
LQ332_RS11065 2440076 .. 2440092 +  -9.3  -3.02263   GCGCAGACCGACCTG              GCGCAGC CAG GCCGCGC              TCTTGGGGCCGATGT  55 426
        bioD 2441659 .. 2441669 +  -8.2  -3.05463   AGCCAGAGCAGGAAG                 CCGC CCT GCGG                 TTCGGTCGCGCGGGT  55 324
LQ332_RS11105 NONE
LQ332_RS11110 2448601 .. 2448623 +  -3.2  -2.82623   CACCCAGCTCCGAAT           CGGTCACCTC GAC GTGGCCACCG           TGCTTGTCGGCCACC  42 105
        asnB 2453141 .. 2453175 + -12.9  -3.15579   TCACCTCCCCCTTTA    CTTCGTACGCAAGGGC ATCC GCCCT-GCGTTCGGAG     TTCGTCGGCGCTTCC  72 365
LQ332_RS11140 2457172 .. 2457192 +  -4.6  -3.54475   GTCTCTTCAGGGAGC           CGGCCG-CG CGAC CGTCTGCCG            TTGTGTCCTGGGGAG  53 58
LQ332_RS11145 2460133 .. 2460146 +  -9.5  -3.61398   CACCGCCTTCGCGAC               GGCCG CCAC CGGCC                TTCTTCGGCCCGGCA  67 351
LQ332_RS11155 NONE
        maiA 2463754 .. 2463809 + -35.2  -3.85698   GCCGCCTGAAAAAAA GGGGACGGAGGGGATTAAGTCGTA TATGCACT TACGACTTAATCCCCTCCGTCCCC TTTCTGCCGCAAACG 100 32
LQ332_RS11180 NONE
LQ332_RS11185 2469184 .. 2469213 + -15.7  -4.82901   TGCAATGAGCATTCA       GCCTGAACCCCGC CCCG GCGGGGTTCGGTC        TTTTTGTCGCAGGGG 100 66
LQ332_RS11190 2469850 .. 2469898 + -14.6  -2.71712   CCAGGCACCACTCAC CGATGCGGGCGGTACCGG-TC TCCTCGTC GATCCGGGGCCGCCCGCATCC CTTTACGGGGCCGGC  75 171
LQ332_RS11195 NONE
LQ332_RS11200 NONE
LQ332_RS11205 NONE
LQ332_RS11210 NONE
LQ332_RS11215 NONE
LQ332_RS11220 NONE
LQ332_RS11225 2480699 .. 2480714 + -11.8  -2.68952   ATTGTCGGCGCTGTT              GCGGCG GCTG CGCCGC               TGAGTTGTATTTGAG  65 7
LQ332_RS11230 2482104 .. 2482114 +  -6.8  -3.03771   CCGGCTGCACCCATT                 GCAG ATT CTGC                 TCTTCGCCGATCTCG  48 351
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD NONE
        glmS 2496152 .. 2496195 + -15.5  -3.54424   TGACGGTGGAGTGAG ATGAGATGGAAACCAGAGCC GCGCG GGCTCTGGTTTCCG-CTCAA TTTCGGCGGATGCGG  90 27
LQ332_RS11340 NONE
LQ332_RS11345 2506866 .. 2506896 +  -4.7  -3.01712   GGCCTCGCCGAGGCA      GGCTGCGGCTGTCGC GAC GCG-CAGTC-CAGCG      TGTTCGCAGCAGGCA  46 123
LQ332_RS11355 2510006 .. 2510057 + -11.4  -3.14344   GTCGGTGGCCGGCTG CGCCCAGCTGGCGCCCTTGTAGAT CTCC AGCTGCGAGGGCGTCGGCCGCACG TTGATGCGCGGGCTG  64 458
LQ332_RS11380 2514550 .. 2514567 + -14.1   -4.8622   CCGGAGAATGAAAAA             CGCCGGC TTTC GCCGGCG              TTTTTCATTCCAACC 100 74
        pssA NONE
LQ332_RS11405 NONE
        rimI 2519857 .. 2519888 +  -6.4  -2.70932   TCGCAGCTGGCCGCC      CCGTGCACCCAGCGC CAT GCACAGGATGC-CGG      TGCTTACCAGCACCA  46 491
        lptF 2526451 .. 2526473 +  -7.6   -3.5944   CCCGAAGGGAGCCCG           CGCATGAGGC TGC GCCCGATGCG           TTTCGACCTCTACCT  63 19
        lptG 2527775 .. 2527794 +  -6.4  -3.53012   CCGCGCCGCAACGGC            GTGCCATC GCGC GATTGCAC             TTTCAGCCGCCACGG  55 240
        xerD 2529170 .. 2529199 +  -7.8  -2.88544   CGCTGCCCGGGCCCG       TCCG-TGGCAGCG CGGCC CGCTGCCGGCGGC       TGTGTCAGAATCCGG  52 55
LQ332_RS11455 2530043 .. 2530071 + -21.8  -5.87996   CGCTGCAGGCAGGAG        GCCGGGGATGCG TGTAT CGCATCCCCGGC        TTTTTTTATTACTTC 100 45
        purL 2536935 .. 2536954 + -10.7  -5.31519   TCGCGTATGGAAAAA            CCCGCTG CATTGC CAGCGGG             TTTTTCTTTGCGTGT 100 71
LQ332_RS11470 NONE
LQ332_RS11475 2546897 .. 2546931 + -15.7  -4.57073   TGTCGTAGTTGAACG     GCCGACGCCCGTCAC CCTGT GTGACGGGCTTCGTC     TTTTTACGAAAGGTG 100 49
        gspE NONE
LQ332_RS11485 NONE
        gspG NONE
LQ332_RS11495 NONE
LQ332_RS11500 NONE
LQ332_RS11505 NONE
LQ332_RS11510 NONE
LQ332_RS11515 NONE
        gspM NONE
LQ332_RS11525 NONE
        gspD 2557870 .. 2557885 + -10.4  -2.52795   ACCCCCAGACCGGCC              CAGCCG CTGG CGGCTG               TGCGTTCGGGCGCTT  58 183
LQ332_RS11535 NONE
LQ332_RS11540 2560121 .. 2560141 +  -2.3  -3.05384   CGTGGCTCGGCCCTA            CGGAAGGCG GCG CGCCCACGG            TTCACTCCGCCGGGC  42 81
        pncB 2561453 .. 2561498 +  -5.9  -3.31144   GCTGTAACGCTCGGA GAAGGCGATATC-GCCGGCGCG CAT CGCGCTGGCCGACACCGACAGC TTCTGGCCCTGGCGC  52 126
LQ332_RS11555 2562756 .. 2562779 + -17.4  -3.01791   GCAGTCGTGCCCGCA          CTGGCCGGCG TTCG CGCCGGCCGG           TGTTCCGCGGCCCCT  88 43
LQ332_RS11560 2563653 .. 2563675 +  -9.8  -3.61517   ATTGACATTGTCGAT           CCATCAGGCG CTT TGCCTGTTGG           TTGTTGGCGCGGCCT  68 126
LQ332_RS11565 NONE
LQ332_RS11570 2567266 .. 2567305 + -17.9  -3.25073   GTCCCTGCTGCGTTC  CGCCG-CAACGTCGCCCG GCTCA CGGGCGGCGTTGACTGCG  TCTTGATCTTCCAAC  91 57
        wecB NONE
LQ332_RS11580 2570880 .. 2570897 +  -2.7  -3.17325   CGCCAACGCAGGGCA             CTGATCCA CCG TGGA-CGG             TCTGTTCTGGAACAT  44 22
LQ332_RS11585 NONE
LQ332_RS11590 2575884 .. 2575908 + -13.6  -2.80816   GCCAGCCCCCAGCGT         CGCCGCA-GCG CCGC CGCCTGCGGCG          TGTCCTGGGTCAGCC  73 41
LQ332_RS11615 2581913 .. 2581953 + -20.6  -3.53012   ACTGTCGATTGAAAC CATACGGGGCCGG-ATTCC TTCG GGAATGCCGGCCCCGTCTG  TTTCGGCCCCGGCAG 100 94
LQ332_RS11620 2583295 .. 2583306 +  -3.6  -3.72576   GGCTGATCGGGGCCG                GGGT CAGA GCCC                 TTTCCTGGCGGAAAG  54 35
LQ332_RS11625 NONE
LQ332_RS11630 NONE
LQ332_RS11635 2584909 .. 2584922 +  -3.1    -3.794   TGGCAATAGGTACTT               C-CCTG AGC CAGGCG               TTTCATGCATTGCCC  54 154
        nrdR NONE
        ribD 2586671 .. 2586689 +    -3  -3.79445   CTTCGTCGTCCTCTT             CGCCAACG GGG CATTGGCC             TTTCCATTGCTGCTT  54 84
LQ332_RS11675 NONE
        ribB 2592466 .. 2592494 + -15.3  -3.14132   GGGATTGCCGGCCAG        CGGCCGGCACT ACCGGTG GGTGCCGGCCG        TTGGTCGGCAGCCCC  80 43
        ribH NONE
        nusB 2593516 .. 2593534 +  -4.4  -2.82516   ATGGCGCAAGGTCGA             ATCGGGTC ACT GACCCGCC             TGTGGTAGTGCCGGC  43 13
        thiL 2594641 .. 2594698 + -10.5  -3.81651   TGCTGGGTGCCAACC TTCCG-GCGTGGGGTCTGATCCCTTTGC GCC GCAAAGGGCTCTGACCCCGAGTGCGCAC TATTTTGGTTGACGT  75 55
LQ332_RS11710 2601577 .. 2601605 + -22.5  -3.32844   AAGCGAAGGGAATGC        GGAAGCGCCGGGT GAT GCCCGGCGCTTCC        TTGTAGAGTCGAGCC 100 42
LQ332_RS11715 2603780 .. 2603797 + -12.7  -3.34962   ACAAGACGGTGTAGC             GCCGAGC CCAC GCTCGGC              TTGTGCGATCTGGAG  77 27
        rsmI 2609191 .. 2609216 +  -2.3  -3.18264   CTGAGTCAGTCCGTA         GGGCAGGGGCG TTGG CGCCGGGGTCC          TTCGTCGATCAAACG  43 314
        rnpB 2611044 .. 2611056 +  -4.7  -3.70307   AGAACCCGGCTTATC                GGCCG GCT CCGCC                TCTTTCTTCCATAGG  58 12
LQ332_RS11770 NONE
        rsmH NONE
        ftsL NONE
LQ332_RS11785 NONE
LQ332_RS11790 2618138 .. 2618165 +  -3.3  -3.68351   AGAGGCACAGGCCGG        GGAGGGCGCCGC ATGAA GCG-CACCCTGC        TTTCGCTGATCGCAC  51 10
LQ332_RS11795 NONE
        mraY NONE
        ftsW NONE
        murG NONE
        murC NONE
LQ332_RS11820 NONE
LQ332_RS11825 NONE
        ftsA NONE
        ftsZ 2628912 .. 2628942 + -17.6   -2.7186   ATGTCCTGAAAACGC      GGGC-GCCGGGCC AGGATG GGCCCGGCCGCCC       TGCTTCACGCGCTTT  84 81
        lpxC 2630005 .. 2630024 + -12.8  -4.15703   ATTTAAAGATAAAAA            CGCCGCCT TTCC GGGCGGCG             TTGTTGTTTCTGGCG  89 57
LQ332_RS11850 2631854 .. 2631872 +   -16  -4.05788   GGGTGTTGCCATCGA             CAGGGCGC CAG GCGCCCTG             TTTCGTTTGCGGCGG  95 206
        secA 2634677 .. 2634706 + -21.5  -2.71712   CAGCTGAGCTGACCC       CGGAAGGCCCCGC GCAA GCGGGGCCTTCTG        CTTTGGCGCGGGCAA 100 29
LQ332_RS11860 2635898 .. 2635912 + -11.4  -3.06696   TCGAAGCGCGCGACA               CGCTGC CGG GCAGCG               TCTGTTCCAGGCGCA  62 194
LQ332_RS11875 NONE
LQ332_RS11880 NONE
LQ332_RS11885 NONE
LQ332_RS11890 2640885 .. 2640905 + -13.3  -3.59979   GCCACGCCATGCGTG            GCTGCCTGG CTT TCAGGCAGC            TTTCCACTCCCACCA  81 88
LQ332_RS11910 NONE
         ppc 2649289 .. 2649306 +  -6.2   -4.7254   CTGGCGGCGGATCTG             CGCTGC GGCCTG GCGGCG              TTTTTCGTCGGACGT  82 197
LQ332_RS11930 NONE
LQ332_RS11935 2653933 .. 2653949 +  -7.9   -3.5393   CCGTAGCGTCGACTG              TCGCGCG TAG CGCGTGG              TTTCCGCAACCTGAT  60 48
LQ332_RS11940 2655237 .. 2655253 + -13.7  -2.89475   ACATCGGCGGTGGCA              GCCACGC ATG GCGTGGC              TCTACTGTGTCGATC  73 166
LQ332_RS11975 2662633 .. 2662649 + -10.9  -2.73364   AACGGGAACGGTAGA              GTCGACT GTC AGTCGAC              TGCTTCGAATGACCG  62 92
LQ332_RS11980 2663096 .. 2663123 +  -7.6  -2.87211   CTGCCGGCCGCGCCG        GCAGG-GTGGGCG ACC CGTCCGCTCCCGC        TCTCTCCCCCCCGGT  52 76
LQ332_RS11985 2665375 .. 2665385 +  -2.4  -3.78775   CCGCACCTTCTCCGC                 CAGC CTT GCCG                 TTTCCTGGTGACCCC  53 4
LQ332_RS11990 2666025 .. 2666038 +  -8.1  -2.93164   GGCCGAATGTCCGTT               GGCCA CCGA TGGCC                TCTCATTACATCTGC  54 50
LQ332_RS11995 2667017 .. 2667057 + -13.2  -2.73681   AAGGCTGATCGCCGC GGTGGAGAGGGGGGCCGGG CGTA CCCGGCACCGCA-TCCACC  TGCTTCCGGTGGGTG  68 33
LQ332_RS12010 2671027 .. 2671037 +  -4.6  -2.60615   CACATCGCGTCCACC                 GTCG ATC CGGC                 ATGTTTCACAAAGCT  43 69
LQ332_RS12015 2671851 .. 2671905 +  -4.3  -2.78463   CGGGCACGGATGACC GGCCG-GCGCTGCCGCCG--GTCATCC TCCGT GCACGACTACGGCG-CAGCGCGCTGCC TATAATCGCAGCGCT  42 92
LQ332_RS12020 2673260 .. 2673302 + -20.7  -2.53876   ACGCCATGCGTGGAT GGGGTTGCGGTAGCGCCGGGC CAT GCCCGGCG-T-CCGCAGTCCC TCAGTTGCAGTGGAC 100 76
LQ332_RS12030 NONE
LQ332_RS12035 2675420 .. 2675453 + -22.5  -3.28712   CCGGCGTACACGTTT     CCCAGAACCCCCGGC CCCG GCCGGGGGTTCTGCG      TTGTGGGCCCCCGGC 100 49
LQ332_RS12040 2677062 .. 2677076 +  -2.7  -4.74084   TTGATCGCCTCGAAT               GCCTG AAAAA CCGGC               TTTTGCTTTTGATTT  74 305
LQ332_RS12045 NONE
LQ332_RS12050 NONE
LQ332_RS12055 NONE
         lgt NONE
LQ332_RS12065 NONE
LQ332_RS12070 2681758 .. 2681776 + -12.4  -3.21276   AACAGCAGGTTCTCT             TCGCGCGT GCC GCGCGCGA             TGTTGTGCAGCACCA  68 204
        ubiH NONE
LQ332_RS12130 2694076 .. 2694131 + -40.2  -5.08824   CGTCTGAAGCAAAAA GGGGACGGAGGGGATTAAGTCGTATG TGCA CATGCGACTTAATCCCCTCCGTCCCC TTTTTTCAGTCAACC 100 34
LQ332_RS12165 NONE
        msrA 2701103 .. 2701144 + -23.3  -3.97636   CTGACGAACTGTTGG AAAACAAAAAGGACGCGGC TTTC GCCGCGTCCTTTTTGTTTG  TTTCTGCATTCCCCT 100 289
        prmC NONE
         pip 2708648 .. 2708676 + -12.3  -3.14522   TAGCTTCGCCTGATC        GGTAGTGCCGGCC GCT GGCCGGCAACGCC        TTACCTGTCCGTTCC  69 28
LQ332_RS12215 2711873 .. 2711921 +  -9.3  -3.66356   ATCCGCGCCAACCGC TCGGCCCAGGCCTGCTGCCCGGC GAC GCCGGCGATCAGGTCCTGGCGGA TTTCCAGTTCCACGT  63 146
LQ332_RS12240 NONE
LQ332_RS12245 2718482 .. 2718492 +  -6.8  -3.70902   GCATGAATGACAAGG                 GGTC AGA GACC                 TTTGCCTCTGGCAAA  62 35
LQ332_RS12265 NONE
LQ332_RS12270 2721847 .. 2721885 + -25.4  -3.53012   CGGGCATTGAGGACC   GGGGCCGGATCCCTTTCC GCA GGAAAGGGCTCTGGCCCC   TTTGCCGGCCAGCGG 100 31
        sufT NONE
LQ332_RS12285 2724410 .. 2724436 + -16.7  -2.59431   GCGGCGTTGTTCCTG         GAAAGCCCGTC CCTGT GACGGGCTTTC         TGCGTTGTGGGGCCG  81 78
LQ332_RS12290 NONE
LQ332_RS12295 NONE
LQ332_RS12300 2726761 .. 2726771 +  -4.6   -4.3534   GACGCTGAAAATCTT                 GTGG TGT CCGC                 TTTTGGTCATTAGCG  70 242
LQ332_RS12305 2728687 .. 2728708 + -15.1   -5.4833   CCCTCTCCAAGGGCA           CGCCCTGGC TTCG GCCGGGGCG            TTTTTTCTTGGGTGG 100 49
LQ332_RS12325 NONE
LQ332_RS12330 2732453 .. 2732469 + -12.3  -2.82623   CTCATGTCTGGTAGA              TCCACGC CAT GCGTGGA              TGATTCTCCAGACAA  66 312
LQ332_RS12355 NONE
        lolB NONE
        ispE NONE
LQ332_RS12370 2740912 .. 2740969 +  -5.3  -2.52623   ACCGCCCCTGCCAAT AGCGGCTGTGTCCGCG-CCTTCCAGCGC ATC GCCCGCGCGGGACGTGGATACAACCGCG GTGTTGTCAGCAGCA  43 28
LQ332_RS12375 2742050 .. 2742069 +  -8.6  -3.01712   GGGGGCATACCCGGA            TGCTTCTG GTCG CGGAAGCA             TCTTCAACCGCCACG  56 66
LQ332_RS12380 NONE
         pth 2743685 .. 2743725 + -11.9  -2.71712   GGTCGGTACGGAGAA  TGATTGGAAAAGCAGCGCC CAC GTCGCTGTTTCCCCAATCA  CTTTCACCCCAGAGA  65 347
        ychF 2744863 .. 2744895 + -18.4  -3.87815   CGGCATCGGATCGGC      CCCGGACGCCCCGC CTTGT GCGGGGCGTCTGCG      TTTCTGGCGATGGAC  95 46
LQ332_RS12425 2760997 .. 2761027 +  -5.3  -2.55544   TCCCCGATGCGCCCC       TTGCCGGCCAGCG GCCGG CGCTACCCTGCAA       TCCATTCCCTCGTCC  43 68
LQ332_RS12430 NONE
LQ332_RS12435 2762316 .. 2762330 +  -7.8  -2.76263   TTTCACGTTGTGACA               TTCCCG GCG CGGGAG               TAGTTCAATGGTAGA  51 42
LQ332_RS12440 NONE
LQ332_RS12445 NONE
         tuf 2763823 .. 2763846 +  -2.4  -4.11216   GGAACCTCGGTCCGC          CTTCGCCGTCT AAG GGAAGGC-AAG          TTTTCAACGTACGCC  58 94
LQ332_RS12455 NONE
        secE NONE
        nusG 2765009 .. 2765023 + -12.8  -4.04394   ACGCCGGACCAGAAA               CCGGGC GGC GCCCGG               TTTCGTTCGTTTAGA  89 68
        rplK NONE
        rplA 2766359 .. 2766398 +  -7.3  -3.54543   ACCCTGAAGTAATCG TTTCGAGCGGTCACGGCAT TTCG GTGCCGTGACCG-T-GACA  TTTGAAGGCATCGCT  60 29
        rplJ NONE
        rplL 2767797 .. 2767855 + -24.1  -2.71712   TCGTTGTTGCGGTGG TGTAGAGTCGACGGTTGGTCGACTGCT GTGAA GGAAGTCGACCAACAGTCGACTCTACC GTTTCAAAAGCAGGA 100 113
        rpoB NONE
        rpoC 2776747 .. 2776768 + -12.3  -3.71649   CAATCGTCTGTCTCA           GCAGGCCAG AATT TTGGCCTGC            TTTAACATTTCCGCA  80 230
        rpsL NONE
        rpsG 2777713 .. 2777724 +  -2.2  -3.08464   CTTGTAAAACAGGCA                G-GGC AGC GCCAC                TTAGGTGCGTGCTGC  42 51
        fusA 2779965 .. 2779983 + -14.6  -3.06815   GCCGTCATGAAGAAG             GGCTGAGC CTC GCTCAGCC             TCTCTTGAAACCACT  80 20
         tuf 2781331 .. 2781363 +   -15  -3.08471   GGTCAATGCCATTCA     GGCGGC-GTCAACAG GCGA CTGTTGACAGCTGCC      TTGCGTGCCATTATG  80 143
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW 2783427 .. 2783448 +  -2.2  -2.50994   CGATGTAACGGCCAA           GGCCTGAGG TACAT CC-CATGCC           ATTGATGAAATTCAA  37 19
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 2788219 .. 2788240 + -15.9  -4.17657   CGAAAAAAACCCGAA           GAGCCCGAC GCAA GTCGGGCTC            TTTTGGCGTATACTC  95 118
        rpsH NONE
        rplF NONE
        rplR 2789818 .. 2789841 +  -4.4  -3.28712   CCTGCTCGCCAGCCT          GAGCGAGGCT GGAC GGCGCCGCTC           TTCTGCAGCGGCCCA  47 76
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 2792658 .. 2792687 +  -8.5  -3.14344   CAACCCCATCCGGCG       CCGGAGCCTGGGCA CAC TCCCCAGGC-CGGG       TTCATGAAACCAATG  57 203
        rpsM NONE
        rpsK 2793589 .. 2793607 +  -3.1  -2.71416   CGTCGCGTCTAAAGG             GAGCGAT AAGAA ATGGCTC             GTTATATCGGTCCTA  40 29
        rpsD 2794245 .. 2794264 + -16.4  -3.05384   ATTCACATTGGAGAG            CCCCCGGC GACG GCCGGGGG             TTCACTAGGAGAACC  85 40
        rpoA 2795265 .. 2795281 +  -2.2  -2.65264   CGGCCGGCGTCGCCA             GCCACGG TATG CTG-GGC              TGATATCGGTAATGC  38 6
        rplQ 2795888 .. 2795905 + -14.1  -4.35524   TGCGACACAGCGAAA             GCCCGGC CTCT GCCGGGC              TTTTGCATTTCCGGA 100 55
LQ332_RS12655 2796574 .. 2796585 +  -3.6  -3.72576   CGCTGAAGCAAGGCG                GGGT CGGA GCCC                 TTTCCTGCGGAAAGG  54 35
LQ332_RS12665 2800625 .. 2800646 +  -9.5  -3.66921   TTGGTCAACACGGTA           G-ATCCACGC CAT GCGTGGATGC           TTTGGGATTCCAATT  68 273
LQ332_RS12670 2802286 .. 2802297 +  -7.2  -3.14051   TGCGGAGGACGCCGC                GCGC GGGT GCGC                 TGTTCGTAGGCGTAG  53 164
LQ332_RS12690 2806999 .. 2807018 +   -15  -3.76373   GATCCCCCTTCGAAA            CGGCCACC CACG GGTGGCCG             TTTCCCTGTTCCCCG  89 39
LQ332_RS12695 2808136 .. 2808156 + -13.3  -4.41494   CTTCCATCGAGGTCG            GTGCCGACC GCT GGTCGGTAC            TTTTCCTTCAGGGTA  95 71
LQ332_RS12700 2809336 .. 2809346 +  -8.2  -2.54574   CACCCCGCCATCCCA                 CGGG AAA CCCG                 CTGTTGCTTCGGCTG  53 496
        prpE NONE
LQ332_RS12710 NONE
LQ332_RS12715 2813333 .. 2813369 + -10.8  -2.57132   GGCCTTCGGCCTTCA   GCGCGGCCTGCACGCCG GCGT CGGCGTCCATGC-GTGC    CTTGTAGGCGGCCAG  58 142
LQ332_RS12745 2820251 .. 2820282 + -18.8  -3.85698   TCTGCCAGTAGGACA      CAGCAGGACCCGGC TTCG GCCGGGTCTTGTTG       TTTCTGCCGCCGGGA  95 51
LQ332_RS12750 NONE
LQ332_RS12755 2821814 .. 2821834 + -10.4  -3.25088   CTGCCGGCCACCGTT            CCAGGCGT AGGGG GCGCCTGG            TTGCTGAATTTCCCG  65 61
LQ332_RS12760 2822246 .. 2822257 +  -7.2  -3.83026   ATCGGTGGGGTGATG                GGGC CAGG GCCC                 TTTCCTGTGGAAAGA  64 72
LQ332_RS12770 2824441 .. 2824457 + -15.1  -4.82855   GCAACACCGGAAAAA              GGCGCCC ATC GGGCGCC              TTTTTCAATTTCATG 100 78
LQ332_RS12780 2828322 .. 2828343 + -17.3  -5.14563   TCCGCGATTCCAAAA           CCCCGCGAC CCAC GTCGCGGGG            TTTTTTCATGCCCGG 100 129
LQ332_RS12785 NONE
        folC 2830423 .. 2830447 +  -2.6  -2.78384   CGCGTTCAGCCAATG          CCGACGCCGG CCGGT CCGGCACCCG          TATAATCGACGGCAA  38 43
LQ332_RS12795 NONE
LQ332_RS12800 NONE
        purF NONE
LQ332_RS12810 2834697 .. 2834753 + -44.3  -4.77157   GCCGGTTGAAGAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GCC ACAAACGACTTAATCCCCTCCGTCCCC TTTTTCATGCGTTGG 100 32
LQ332_RS12820 2837705 .. 2837731 + -20.9  -3.72576   GCTGAGTCCGTACTG         TCCGCGGCCGC CTTGT GCGGCCGCGGA         TTTCCTGCCGGCGGG 100 36
        grxC NONE
LQ332_RS12885 2853849 .. 2853873 +  -2.8  -4.62302   CTTCCTTTGCGCCGG         CGTT-TCCGGG CACG TCCGGACGGCG          TTTTTCCCCCTGTTC  72 301
LQ332_RS12890 2854932 .. 2854963 + -19.4  -3.28712   GACCTCGGTTGGATC      CACAGCGGGGCGCC TTCG GGCGCCCCGTTGCG       TTATGGGCAGACCCG 100 51
LQ332_RS12900 2857013 .. 2857027 +  -3.5  -3.16564   ACTGCCGGTGCGCAA              G-GCCG GCGA CGGCGC               TTGATAAGCTGGCGG  43 7
LQ332_RS12905 2858123 .. 2858156 +  -5.9  -2.80935   AAGTAATCGGCGGGG     CCGCCGCCGC-GCA GGATCGG TGCCGCTGCGGCAG     TGTCGTAGATGCCAT  46 155
LQ332_RS12920 NONE
LQ332_RS12925 2859891 .. 2859904 +  -2.3  -3.56821   TACAGGTTCGATTCC               TGTCG GGCG CGCCA                TTTCACCCATCTCCT  50 12
LQ332_RS12930 NONE
LQ332_RS12935 2861065 .. 2861087 +    -9  -3.05844   ACCCCACTGTTTCAA           CCGTATCGGC GCA GCCGGAGCGG           TATTGCAATAAACAG  57 35
LQ332_RS12940 2861219 .. 2861240 + -15.9  -5.56673   CCCACCAAGACAGAA           GCCACCTGG CACG CCAGGTGGC            TTTTTTCTTATAAGT 100 34
LQ332_RS12945 2861492 .. 2861513 + -14.5  -5.49234   GCCCACCAGACGAAA           GCCACTTGG TTCG CCAAGTGGC            TTTTTTCTTGCCTGT 100 33
LQ332_RS12950 2861857 .. 2861867 +  -6.8  -2.69964   TGCGGCAAGCAGGCG                 CGTC CCA GACG                 TCGTGTCCTTACAAC  48 134
         tig 2863253 .. 2863276 +   -21  -3.61398   GCGGATCACCGGATG          CCCCGCGCCG TTGC CGGCGCGGGG           TTGTTGCCCCCCAAG 100 45
        clpP 2863970 .. 2864004 + -16.5   -2.8055   GAGGCTCCGTTCCTG    CAGGGTCGGGCGGGAC TGGT GTCCC-CTCGGCCCTG     TGCTATTCTCGAATC  84 61
        clpX 2865405 .. 2865433 + -21.8  -5.71712   GCCTTGCATCTGAAA        GCCGATGGCCCC ATAAC GGGGCCATCGGC        TTTTTTTGTCTCCGG 100 80
         lon 2868084 .. 2868112 + -14.6  -3.12999   AACCGTTTCCACATG        GCGGCCGCATGC AGATG GCATGCGGTTGC        TTCCCTGTCGAATCC  80 169
LQ332_RS12975 2868432 .. 2868448 +  -2.1  -3.05816   GATGCTGTAAACTAA              GCGGCTC GCT GGGGTGC              TTAGCTCAGCGGTAG  42 26
LQ332_RS12980 NONE
LQ332_RS12985 2868630 .. 2868652 + -12.7  -4.77173   CCGCCATTCAACGAG           GCCTCCGGC CAAAA GCTGGAGGC           TTTGTTTTCTCCCCG 100 35
LQ332_RS12990 2868790 .. 2868812 + -12.7  -4.77173   CCGCCATTCAACGAG           GCCTCCGGC CAAAA GCTGGAGGC           TTTGTTTTCTCCCCG 100 35
LQ332_RS12995 2868947 .. 2868977 + -18.3  -3.21276   GCTCCGCCATTACAT       CGAGGCCCCCGGC CGAAA GCTGGGGGCCTTG       TCTTCTCACCGGCAG  93 32
LQ332_RS13000 2869135 .. 2869146 +    -3  -3.14051   GTCCCTGTGAAAAAA                CTTT GAAA AAAG                 TGTTCATCGGGCTGG  43 56
LQ332_RS13005 2869297 .. 2869318 + -15.1  -5.30616   CCGCCAACTTCAAAA           GCCCTCGGC GCAA GCCGGGGGC            TTTTTCTTTGCGTCA 100 35
LQ332_RS13010 2871450 .. 2871468 + -17.4   -5.4505   CTGCAGGTATGAAAA             GGCCCGGC AAT GCCGGGCC             TTTTTTGTTGGAGCG 100 50
LQ332_RS13025 NONE
        rnhA NONE
        dnaQ 2875467 .. 2875477 +  -6.8  -4.11216   GCTGGCCGGCATCTG                 CGTG CAA CACG                 TTTTCCCGGTGAGCC  68 66
LQ332_RS13045 2876514 .. 2876530 + -15.1   -5.4505   CAGATAAAGAAAGAA              GCCGCCC ACT GGGCGGC              TTTTTTCTTGGCCAG 100 39
LQ332_RS13050 2877455 .. 2877465 +  -8.2  -3.03441   CGTAGCGTTCGAAGG                 CGGC GAT GCCG                 TCTTCCACGGTGATC  55 79
LQ332_RS13060 NONE
LQ332_RS13065 2880340 .. 2880350 +  -4.6  -4.11394   GTTGCTGCCTTCCGG                 CCCT GGC GGGG                 TTTTCGACCTAGCGT  66 362
        sugE 2881039 .. 2881052 +  -2.4  -4.07568   GGATTCTCCGCCACA               TGCA GCAATA TGCA                TTTTCGGCAAAACCA  58 65
LQ332_RS13080 2892426 .. 2892436 +  -4.6  -3.14564   GCTGGCTGGTGCTGA                 GCGT GAT GCGC                 TTGATCGAGGGATCC  47 200
LQ332_RS13090 2893586 .. 2893602 + -15.1  -3.95007   CAGCCCAATAAAAAA              GCCGCCC AAG GGGCGGC              TTCTTCATTTATCTG  95 136
LQ332_RS13095 NONE
LQ332_RS13100 2895482 .. 2895499 + -10.5  -4.54026   GCTACGGAATTTTTG             GCCCTGC CTCG GCGGGGC              TTCTTTTATTTCGGC  89 79
LQ332_RS13110 2898034 .. 2898057 +   -11  -3.00923   GGATAATTCATCCGA          GCAGGGGCAGC TTA GC-GTCCCTGC          TGTCTCATCTTGGGA  65 35
LQ332_RS13120 NONE
LQ332_RS13125 NONE
LQ332_RS13130 NONE
LQ332_RS13135 2903746 .. 2903756 +  -3.2  -3.01712   AAACGCCGGACTGGT                 GGTC ATG GATC                 TCTTCACCAAAGGAG  42 116
LQ332_RS13140 NONE
LQ332_RS13150 NONE
LQ332_RS13155 2906543 .. 2906556 +  -3.1  -5.00884   ACCCCCAGCTATGAG               GTTCA GATG TGGAC                TTTTTTCAACGCAGT  81 58
LQ332_RS13170 2910409 .. 2910426 + -14.1  -3.56594   GATAGACAAGCGAAG             GCCCCGG CGAG CCGGGGC              TTTAGCCACCTTTGG  84 39
        dnaX NONE
LQ332_RS13190 2914989 .. 2915022 +  -5.1  -2.88544   TGCCGTTCTGATTGC     CAGTGTGGCACCCGT GCAA GCGGGTGCCACGGAA      TCTGTAGCCGTCGAG  45 30
        recR NONE
LQ332_RS13200 2916152 .. 2916169 +  -8.3  -4.13767   GCACGGATGAAAAAA             AGCCGCC CGAA GGCGGCC              TTTTCCGATCACGCG  72 84
LQ332_RS13225 2922753 .. 2922770 +  -9.1  -3.53444   GCCTGAGACTGATTG             CCGTGTG AAAG CGCACGG              TTTGCCCGGACATCG  61 331
LQ332_RS13235 NONE
        rpmF 2923999 .. 2924022 + -19.6  -3.89435   TTGATGTGCCGGGAA          GGCCGCTGCC TCCG GGCAGCGGCC           TTTGCCTTCTTTCCC 100 37
LQ332_RS13245 2925085 .. 2925116 + -17.4  -3.53224   GACAATGTGAAGTCT      TGTCGTTACGGCCCC TCC GGGGCCGTAACG-CG      TTTAAGGAGGACCTG  93 54
LQ332_RS13250 NONE
        fabD NONE
        fabG 2927866 .. 2927890 +    -2  -3.43756   GGGGCGCAGGGATTG          CGCCGCAAGT GGTTG ATCTGCGGAG          GTTTTTGCTGCAATG  47 45
        acpP 2928288 .. 2928313 + -18.3  -3.36515   CCGCGCACCGCACCC         CATGGGGCCGC TGTT GCGGCCCCGTG          TGTTTGGGCATCACA  93 75
        fabF 2929688 .. 2929703 + -11.8  -3.09015   GCCGCGTTCTACGGA              GCCGCC GCAA GGCGGC               TTCCGTGCATCTGAA  69 70
LQ332_RS13275 2931171 .. 2931222 + -10.8  -3.14211   GCGCTTGCCGGCCAG CGGCCGGCA-CTACCGTACCGGTGG GTG CCAGTGTTGTGGTGGGTGCCGACCG TTGGTCGGCACGGGT  63 96
        mltG NONE
         tmk NONE
LQ332_RS13290 NONE
LQ332_RS13295 2934344 .. 2934354 +  -2.4  -3.48276   ACGATGTGAGGCTGC                 GCGC GGG GCCC                 TTCTGTAGCGCCGGG  47 32
LQ332_RS13300 2934564 .. 2934581 +  -9.1   -5.4833   TGCAGAACGAAAGAA             GCCTCCA GCAA TGGGGGC              TTTTTTGTTGCCTGC 100 44
LQ332_RS13315 2936845 .. 2936883 +  -5.3   -3.7614   GATCAGCGTCTCGCG  GCCGGGTAGG-GTGTA-GC TGA GCGTACGCGTCTGCCGGGC  TTGTTCCTGATGCTT  58 270
LQ332_RS13430 NONE
LQ332_RS13435 2955625 .. 2955640 +  -5.4  -3.30124   CCTGGAGAGGGCGGT              GCG-GCA GCC TGCGCGC              TTCTAGACCCTCGAG  51 4
LQ332_RS13440 2956336 .. 2956361 + -10.3  -3.06796   CTGTCCCTTTCTGAT         TGCTGCCCTGC CATT GCGGGGCGGCC          TTGCATGCCGTGAAA  63 112
LQ332_RS13445 NONE
LQ332_RS13450 2960202 .. 2960222 +  -4.5  -2.78384   AAACGGCAGTGATGG            CCAGCGCGC CGG GCATGCGGG            TCTGGTGGCCGGCCA  43 193
       smqnr 2963272 .. 2963314 +    -5  -3.07113   GCTGCGAGGCCAGAT G-GC-CACCG-CC-GAAGCTGG TCG CCAGCTTCAGGTCGGTCAGCGC TTCGATCCAGTCGTG  46 525
LQ332_RS13475 2965661 .. 2965677 +  -5.1  -3.62096   CTTCAATGCCCGGCA              GCTGC CACGGAT GCAGC              TTTCCGGTGGTGGGG  54 390
LQ332_RS13485 2967950 .. 2967969 +  -7.8  -3.17051   TCCCGCTCACGCCGC            CTATGCCC ACCC GGGCCTAG             TGTTGATCGTCCCCG  55 80
LQ332_RS13495 NONE
LQ332_RS13500 2971737 .. 2971775 + -10.8  -2.55668   TGACGTGGGGAGCAG   CACCCGGTAATGGCGGCC GTT GGCCGTCAATCCCGGGGA   ATTCCTCTGCACATG  58 16
        soxR 2973724 .. 2973779 + -29.4   -5.4505   CTGGGAATGAAAAAA GGGGACGGAGGGGATTAAGTCG CAAGTGCACAAA CGACTTAATCCCCTCCGTCCCC TTTTTTCTTACCAGA 100 31
LQ332_RS13520 2975473 .. 2975487 + -11.4  -2.59431   TTCCTGCCCGCGTAC               CTGCGC GGC GCGCAG               TGCCTTGTCCACCAG  59 135
LQ332_RS13535 2978112 .. 2978130 +    -8  -3.72576   CGGCGTGCACCTGTG             CGGCGCCG TCC CCGTGCCG             TTTCCTCCACCGACC  65 58
LQ332_RS13540 NONE
LQ332_RS13545 2980151 .. 2980164 +  -5.2  -2.78816   GCTGGCTCAATCCAG               CGCC ACGACA GGCG                TATCGTCAGCACTCC  45 91
LQ332_RS13550 2981666 .. 2981695 +  -2.7  -2.80994   CCGCGATCATGTCGC       GCGCCAGCCG-CTC GCC GAGGCGGATGCCGA       TGTCATAACGTTCGG  39 511
LQ332_RS13560 2982477 .. 2982495 +  -4.6  -2.71268   AGCTGAACGATTTCA             TCTGCA ACTGTCA TGCAGA             TCGTGTCTAATACCG  44 74
LQ332_RS13565 2983700 .. 2983717 +  -6.2  -3.64259   AAGCCGTCGTAGGCC             GCGCGG AAGCCC TCGCGC              TTCTTCAGGATCGTT  57 480
LQ332_RS13575 NONE
        ruvX NONE
LQ332_RS13585 2986010 .. 2986041 +  -9.5  -3.34895   GCAGGTACCAATCTT      GGTTGGCA-CTGCC GTTGG GGTGGGTGCCAACC      TTGGTTGGCACTGGC  64 50
LQ332_RS13675 NONE
        murA NONE
LQ332_RS13685 3001718 .. 3001735 + -14.1  -4.87133   AAGAAGTAAGAAAAA             CGCCCGC GAAA GCGGGCG              TTTTCTTTGCGCGGT 100 32
LQ332_RS13725 NONE
LQ332_RS13730 NONE
         hda 3010115 .. 3010134 +    -5  -5.24515   ACCCGAGCAAGCGCA            GCG-AAGCG ACC CGCTTTTGC            TTTTCTTTCTTTCTT  93 300
LQ332_RS13760 3014712 .. 3014747 + -11.3  -4.05788   ACAGGGACGTAACGA   TTGCCCGGTACGACACA TGGC TGTGTCG--CCGGGCAG    TTTCATTTCCGGCGC  81 256
LQ332_RS13765 3015913 .. 3015924 +  -2.2  -3.31461   ACCCTCAAGGGCAAC                TGAG TCCC CTCG                 TTGTGCCCATGACTG  45 23
LQ332_RS13770 NONE
LQ332_RS13775 3017325 .. 3017341 + -12.3  -2.79796   CGCCGTTGGGCCCCA              TCCACGC ATG GCGTGGA              TCTACTGCACTGCGG  66 49
LQ332_RS13845 NONE
LQ332_RS13850 NONE
LQ332_RS13855 3037819 .. 3037834 + -10.4  -3.21924   CTGAAAACAAGAAAG              CCACGG TTTC CCGTGG               TGTTCTCGCACGTCC  65 159
LQ332_RS13890 3044434 .. 3044472 + -21.1  -3.15249   CACGGATGCTCTCCA  CCTGCCGTGCACGGCAGG GTCA CC-GCCGTGCAAGGCAGG   TTCGTCCACGCTGTG 100 70
LQ332_RS13895 3045065 .. 3045123 + -11.3  -2.70932   GACGCGTACCGGTAG -----TGCCGGCCGCTGGCCGGCAGATGCAG TCA CTGCG-CTGCCGGCCAGCGGCCGGCACTACC TCATTGACCCGGCAC  62 39
LQ332_RS13920 3048548 .. 3048599 + -20.8  -2.52464   GGCTGACTTCGAACG GTGCACGGCCGTGGGGCAGGGCCTG GCG CAGGTCCAGCCACGCGGCCA-GCAC TGCATTGGCAGCACC  85 320
LQ332_RS13935 NONE
        murL NONE
        murD 3055799 .. 3055815 +  -6.5  -2.71712   ATCGCCTGATCCGCC              GGATCGG GGG CGGATCC              CTTTCCGCAGGAAAG  48 32
LQ332_RS13950 3056499 .. 3056516 + -12.7  -2.61484   TGGCTCCACTGTAGC             GCCGAGC CCAC GCTCGGC              TGCCTTCATTCGTCT  67 90
LQ332_RS13960 3058224 .. 3058261 + -13.3  -3.13403   CCACGGCATCGTTGT   CGCCCAGGCCATCGAGC GCGC GCTCGGCGGCCTCGGCA    TATTCCTCGGCACGC  72 208
LQ332_RS13970 3061016 .. 3061041 + -17.6  -5.28176   GTGGCGGTACTTGCG         GGGACGGGGC CGAAGT GCCCCGTCCC          TTTTTTGTGGGTGGG 100 53
LQ332_RS13985 NONE
LQ332_RS13990 3070180 .. 3070193 +  -2.3  -2.81464   GCTGCGGGTTCCGTC               CCGTC CGGA GGTGG                TGTGATGCGTGGTGC  40 7
LQ332_RS13995 3071935 .. 3071948 +  -6.7  -2.53876   CCGCTGGCCGGCAAC               CCATG AATC CATGG                TCCCTTCAGATGCCG  47 47
LQ332_RS14000 NONE
LQ332_RS14005 3072970 .. 3072999 +   -12  -3.17212   CCCGCATGTGTTGCG       CGGAGCGCCGGC GCATCG GCCGGCACCCCG        TTCCTCACATCGTCA  69 121
LQ332_RS14025 3079564 .. 3079589 + -12.6  -5.63103   TTTAGTGTTGATAGA         GGCCCTCATC GTTGCG GATGGGGGCC          TTTTTTTCGTTCGGC 100 56
LQ332_RS14030 3080419 .. 3080436 +  -3.4  -3.69256   GGTTGCTCTCCGAGC             CG-TGCC TGGCT GGCAGCG             TTGTCTTCGATGAGT  54 119
LQ332_RS14035 3081365 .. 3081382 + -14.1  -4.99043   TGGTTAGAAAGGAAA             GCCCCGC TAAT GCGGGGC              TTTTCTTTCTGCGCG 100 287
LQ332_RS14040 NONE
LQ332_RS14045 NONE
LQ332_RS14050 NONE
LQ332_RS14055 3085546 .. 3085575 + -16.5   -2.8333   GCTGCGACAGCTGGG       GGAAGGGCGGC ATCAGGCC GCCGCCCTTCC        TGATCTTGTCCTTGA  75 88
LQ332_RS14085 3091386 .. 3091396 +  -8.2  -3.63569   ATCGTCCAAGGGGGT                 CGGC AAT GCCG                 TTCTTCACCGATTCG  65 168
LQ332_RS14090 NONE
LQ332_RS14095 3093629 .. 3093639 +  -8.2  -3.17075   ATCCGAGTGCCGGCG                 CGGC CTT GCCG                 TTGGGTTCGCGGCGG  57 69
LQ332_RS14100 3095663 .. 3095674 +  -3.6  -2.57468   CCAGCCGCGGGTGAA                GGCG ATGC TGCC                 CTTGCTGTGCTCGAC  40 199
LQ332_RS14115 3097191 .. 3097237 +  -7.1  -3.62096   CGAGCTCACAGTCTG ACCCGGCGGTGGTAGGGCAACG CAGC CGTTGCGC-GCCGCGCCCGGGC TTTGCCATCCTCCCC  59 25
LQ332_RS14120 3097979 .. 3098002 + -11.7  -2.62613   TTGACCGCTCGTCCC          GCC-CGCGCC AGACC GGCGCGAGGC          CTGTTTACCCTGGCC  62 144
LQ332_RS14125 3098491 .. 3098507 +  -2.9   -2.8001   CGCGGTGATGCGCGA              TGACCTC GAT GGTGTCA              TCTGATGGCGATTGT  41 4
LQ332_RS14130 NONE
LQ332_RS14135 3100374 .. 3100397 +  -5.2  -4.42062   TACACAGCACGACCC          GC-AGCCGTCA CCA TGGCGGCCCGC          TTTCTTTCCAGGATG  70 78
LQ332_RS14140 3101555 .. 3101565 +  -3.2  -3.60048   GCCGTGACCTGAAGT                 GGGT CAG ATCC                 CTTTTTTGGGGGAAA  51 34
LQ332_RS14170 3106363 .. 3106400 +  -3.9  -2.52635   CTGGCCGAGCAGGGG   GGCTGAGCG-ATGACCGC GCT GCGTGCGTACGCGCTGCC   GTTGCTGATGGGACT  41 20
LQ332_RS14175 NONE
LQ332_RS14180 NONE
LQ332_RS14185 3109019 .. 3109037 +  -8.8  -3.17075   GGAATTGCAGTTGCC             GGGCTGAG TTG CTCGGTCC             TTGGGTTCGCGGGCA  57 19
LQ332_RS14190 3110907 .. 3110940 +  -7.3  -3.09671   TCGGCCGCTTCGGCG     TCACCCCAGATGTTG GCCT CGGCGGCCGGGGTGA      TGTTGCCGTTGACAT  52 460
LQ332_RS14200 3112065 .. 3112091 +  -9.5  -3.05844   ACCAAGCCCACGTCC        GGTAGTGCCGGCC GCT GGCCGGCA--ACC        TCTTCCGCTCAGCCG  60 182
LQ332_RS14265 3127576 .. 3127605 + -17.9  -4.13014   CTCCAAGGTAGTGGC       AACGACGGCACCG GCAA CGGTGCCGTCGTC        TTTTCCGGCTCTGGC 100 79
LQ332_RS14270 3129680 .. 3129710 + -19.8  -3.07487   GGCGCTCTGAGCTGA       CAGGGCGGCGGA TGATCGT TCCGCCGCCCTG       GTTTTCCACATGTGC 100 31
LQ332_RS14285 3134973 .. 3135000 + -13.4  -4.37886   AGCGGCCGGCACTAC        CGCAGACCCCGC TTCG GCGGGGTTTGCC         TTTTCTGGCGGCTGC  95 91
LQ332_RS14290 3137187 .. 3137208 + -18.7  -4.04187   CAACTGAGGGTTGCG           GCGCCGCCC TCCG GGGCGGCGC            TTCTGTTTTCTGGTA 100 34
LQ332_RS14295 3138748 .. 3138779 +  -4.2  -3.53012   AAGGTCCGGCGCGTC      GCCACGCGCCCG TGGCCAAC CGCGCCCGCGGC       TTTACGCCACCGGCA  51 219
LQ332_RS14325 3143825 .. 3143836 +  -2.2  -2.58767   CCGCCCTTACCAAGG                TTCC TGAA GGAG                 TGCGTTGATGATTCG  38 6
LQ332_RS14330 3144523 .. 3144547 +  -4.8  -2.70932   GCTTGGGTGGCGCCC          GGGGGTTCCC GCCAA GGTTGCCCCC          TACTTGCCGGGCAGC  44 63
LQ332_RS14335 3145829 .. 3145849 + -15.4  -6.36459   TGTTGGACACGAAAA            CGCGCCGC TGACT GCGGCGCG            TTTTTTTTTATTCCG 100 61
LQ332_RS14340 3146320 .. 3146374 +  -5.5  -4.83032   TTACATGGGGGCGTT GCGCGGCAGCGGCTGTAG-AGCCGAGC CAT GCTCGGCTTCGAGCGAAGCGGCC-CGC TTTTGTCTTTGCTCT  82 76
        purT 3150457 .. 3150513 + -44.3  -4.58395   CCGTAAACCGAAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GCC ACAAACGACTTAATCCCCTCCGTCCCC TTTTTCCACCGTGCA 100 35
LQ332_RS14385 3153299 .. 3153344 + -22.1  -3.60296   TGAAGGTCAATGCAG TGAATGAC-GACAACGCCGGCA GAG TGCCGGCGTTGTCCGTCATACG TTTCCGCTGCGCATC 100 38
LQ332_RS14410 3158023 .. 3158038 + -10.4  -3.13073   GCCTTGGCATAGCTC              TCGCGC ATCT GCGCGA               TGTGTTCCTGCGCGT  60 462
        rplU NONE
        rpmA 3162847 .. 3162864 + -14.1  -4.43309   AGTGCTGCATGAAGA             GCCCCGC TTCG GCGGGGC              TTTTCGTTAGAGTTG 100 76
        obgE 3164060 .. 3164075 + -11.8   -5.4833   TGGCGTTGGCAGAAA              CCCGGC TCCG GCCGGG               TTTTTTGTTGGGTAG 100 59
        murJ 3166223 .. 3166239 + -11.5  -2.77899   GCGATGGGCTTCCGC              CCGCGCG ACC TGCGCGG              TCATTGATCGCGGCG  62 2
LQ332_RS14455 NONE
        ileS NONE
        lspA NONE
        ispH 3171653 .. 3171676 +   -11  -4.62069   TGAAACTGCTCTGGT          GGGTGCGAAC CTGG GTTCGCACGC           TTTTTCGCATGCAAG  93 79
LQ332_RS14475 NONE
LQ332_RS14480 3174338 .. 3174396 + -19.3  -2.89655   AATAGCAAAAAGGGG --ACGGAGGGGATTAAGTCGTTTACAGCA CCG TGGCGTAAACGACTTAATCCCCTCCGTCC CCTTTTTTTGGGGCG  93 36
LQ332_RS14510 3183514 .. 3183526 +  -4.8  -3.29144   CGGCGTGATGCTGGG                CCTG GGCTA CAGG                TTCTAAGGGGGCTCG  49 7
LQ332_RS14515 3184795 .. 3184807 +  -4.7  -3.53563   GGACAGGTCGGCGGA                CGTGC GTA GCCCG                TTTGCCGACGCATCT  53 187
LQ332_RS14520 NONE
LQ332_RS14525 NONE
LQ332_RS14530 3191791 .. 3191803 +  -6.9  -2.70932   CCAGTAGGCAATTGT                CCTCC CGT GGGGG                TAATTGACCACAGCG  48 115
LQ332_RS14535 3191935 .. 3191955 + -12.5  -4.96848   CCAGTTGCATGAAAA            GCCCCGGCC TTT GGTTGGGGC            TTTTTGTCTGCGCCC 100 38
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 3197398 .. 3197415 + -14.1  -5.06816   GTTGCCACGCAGAAA             GGCCGCC CTCG GGCGGCC              TTTTTGTTGGCGGGT 100 53
        radA 3201288 .. 3201300 +  -5.5  -4.59773   ACGGCAACGGTCAGG                CTGGC TGT GCTAG                TTTTTCCCGCTCGAC  79 86
LQ332_RS14580 NONE
LQ332_RS14585 3205578 .. 3205623 + -13.3  -2.88544   TACGGCCTGTAAGCC GGGTAT-CGGGTAGTGCCGGCC GCT GGCCGGCAGCACCGGGATATCC TGTGTGCCGGTCAGC  69 29
LQ332_RS14590 3206172 .. 3206186 + -12.8  -3.02043   GGTTCAGTTGCCGGC               CCGGCC CGC GGCCGG               TATTACCGGGCCATT  71 67
         ffh NONE
LQ332_RS14605 NONE
LQ332_RS14610 3210533 .. 3210553 + -11.1  -3.05384   GCAAAAAGGATCTGA            CCCCGGG CGAGCTC CCCGGGG            TTGGCTCGGCCGGGC  66 26
        rpsP 3210899 .. 3210920 + -17.3  -3.23853   CGGCCTGATCCTGAC           GGGCCACGC TTCG GCGTGGCCC            TCTTGGTTGAAGCAG  91 33
        rimM 3211430 .. 3211442 +  -3.3  -3.31144   CCTGGTCGTGGTCGA                CTGGG ATC CCGAG                TTCTGAGCCTGAGCA  47 7
        trmD 3212204 .. 3212227 +   -11  -3.91412   GCCCGGAACCAGAAG          GCCAGCCC CTAGCGCA GGGCTGGC           TTTATCGGCTATCAT  79 14
        rplS 3212797 .. 3212816 +   -15  -3.84451   CGGTTGTTGCCGCGA            CGGCCACC TTCG GGTGGCCG             TTTGCGTTTCCGGCA  91 51
LQ332_RS14635 NONE
LQ332_RS14640 NONE
LQ332_RS14645 3214195 .. 3214211 + -15.1  -3.03619   AGAAGAAGCGGTAGA              GCCGGCC GCT GGCCGGC              TGTTGCGCGATGCTT  79 27
LQ332_RS14655 NONE
LQ332_RS14660 3216781 .. 3216794 +  -3.7  -4.25104   CGATGCCGCCCTGCT               GCTGC ACCT GCTGC                TTTTCCTGGCCGAGC  67 183
LQ332_RS14680 NONE
LQ332_RS14685 NONE
LQ332_RS14690 3225731 .. 3225751 + -10.4  -5.36441   TGTTCACCCGCTCAA            GCCCCAGG TCGCC CTTGGGGC            TTTTTTGTGTCCGCA 100 127
LQ332_RS14695 NONE
LQ332_RS14700 NONE
LQ332_RS14705 3227997 .. 3228013 +  -2.2  -4.61482   CTGTTTTTTTAACCA              GCAAAC CAGCA GTTAGC              TTATTTTTTGAACAA  70 426
LQ332_RS14710 3228386 .. 3228409 +  -5.8  -2.70932   ACCCCACAAACGCGA          AACCCCGCCT TGCC GGGCGGGGAG           TCGTTGGAGCCGAAC  46 40
LQ332_RS14715 3230303 .. 3230319 +  -3.5  -2.71712   GAAGAAGGCCGGCTA              ACCCAGC AAC GCCGGGC              ATTTCCGGGGCAGGC  40 25
LQ332_RS14720 NONE
LQ332_RS14725 3231994 .. 3232013 +   -15  -4.78848   TGCGCTGGATTGAGA            GGGGTGGC GAAC GCCACCCC             TTTTCTCTTTGCAGA 100 298
LQ332_RS14730 3233857 .. 3233872 + -11.8  -5.45802   AAGGCCAAGGGAAAG              GGCGGC GAAA GCCGCC               TTTTTCTTTTCCAGA 100 39
LQ332_RS14735 3234413 .. 3234429 +  -2.1  -2.51089   GTGGTCCCGATTGAG              GGGCAGC GCT GATGGCC              ATATCTATTTCGGCT  37 14
LQ332_RS14740 NONE
LQ332_RS14745 3235307 .. 3235321 +  -2.8  -3.61715   GCGAGCCGTCCACCT               TGTTTG CCC CAGACG               TTCTTCCCGGGCCTG  51 44
LQ332_RS14750 NONE
LQ332_RS14755 NONE
LQ332_RS14760 3237927 .. 3237938 +  -2.2  -2.91383   ACGACATCAAGGCAC                GCTA AGCA TGGC                 TCTCTCCCTCAAGGT  40 21
LQ332_RS14765 3240591 .. 3240605 +  -4.9  -3.01712   ATGATCAGGTGTGAG               TGGGG TTCAC CCCCG               TATTACGAACACCGG  46 37
LQ332_RS14770 3240930 .. 3240948 +    -3  -3.14683   GGGATGCTTATCGCA             CGGGCTGA TTC TCGGATCG             TTGATCGCCCGCTAT  43 43
LQ332_RS14775 NONE
LQ332_RS14780 NONE
LQ332_RS14785 3242469 .. 3242494 +  -4.6  -3.72324   CTACCACTGCGAATG         AGGCTGGGCA TACTTC TGCCCATCCC          TTGTTCCTCGGAATC  58 74
LQ332_RS14800 3244708 .. 3244727 +   -15  -5.08255   AGGGTTTCTACCAAA            CCCCCGGA TATC TCCGGGGG             TTTTCTTTTGAGGGT 100 48
LQ332_RS14805 NONE
LQ332_RS14810 3248033 .. 3248057 +  -4.1  -3.76373   CTCGCAACCTCTTCC          AGCTCCGCGAT GAG AGCCCGGAGCC          TTTCGATCTTCGGCC  55 389
LQ332_RS14820 3249454 .. 3249468 +  -6.4  -3.01712   TCTACGACGACGCTG               CGGAGA TCG TCTTCG               TCTTCAACAAACAAC  48 384
LQ332_RS14835 3251205 .. 3251220 + -10.4  -5.95539   CCTTGGGCGCCGGTC              GGGACC TTCG GGTCCC               TTTTTTTATTTCAGC 100 50
LQ332_RS14845 NONE
LQ332_RS14850 NONE
LQ332_RS14855 3254956 .. 3254970 +  -4.2  -2.78547   CACTTGGGCAAGTAA               CGTGGC GCC GTCATG               TCCTTGGTCGAATAC  42 26
        ligD 3257527 .. 3257562 +  -5.2  -2.71731   TAGCCGCTATCCCCG    CGGTCGTGTCCGAGCG TAGA CGGGCAGACGCGAGCG     TCGTTGGCAGCTGCC  44 38
LQ332_RS14865 3258211 .. 3258232 +  -5.7  -4.45083   CCAGTAGGGCGATCG           CGTGTCGGG CCCG CCCGGCGCA            TTTTCTCCCTATCGA  73 46
LQ332_RS14880 3260264 .. 3260281 +  -2.6  -3.53012   GGGGAGCTGCTGAAG             CCGTTC CTGGGC GGGCGG              TTTAAGAACGGCAAC  47 28
LQ332_RS14885 3261035 .. 3261052 + -14.1  -5.61596   AGCGTTGCAGATAGA             GCCCCGG GAAA CCGGGGC              TTTTTTTGTGGGCGT 100 51
LQ332_RS14890 NONE
LQ332_RS14895 3262480 .. 3262495 + -11.8   -4.2142   AGGGGGCTTTTCAGG              CGCGGC CCAG GCCGCG               TTCTTTTGAGCTCTT  95 128
LQ332_RS14900 NONE
LQ332_RS14905 NONE
LQ332_RS14910 3263602 .. 3263618 +  -7.2  -3.41051   CACCTGCTGTGGGAA              GCGCTG GCAAG CGGCGC              TTCTGATGAACGTGA  55 3
LQ332_RS14930 NONE
LQ332_RS14935 3268406 .. 3268420 +  -2.7  -3.05384   CTGCGGGCTAAACGG               GCCGC AGTCC GCCGC               TTGACTGCACGCCGG  42 30
LQ332_RS14940 NONE
LQ332_RS14945 3271469 .. 3271484 +  -3.9  -3.23979   ATAACGGATGTTCCC              CGCGT CCGAAA GCGCG               TTGCATTGCTCTTCA  45 452
LQ332_RS14955 NONE
LQ332_RS14960 NONE
LQ332_RS14965 NONE
LQ332_RS14970 NONE
LQ332_RS14975 3275443 .. 3275459 + -15.1  -5.28176   TGGTAGTGAACGACA              GGCGGCC ATG GGCCGCC              TTTTTTATGGCTGGC 100 49
LQ332_RS14980 NONE
LQ332_RS14985 NONE
LQ332_RS14990 3276531 .. 3276548 +  -8.3  -5.31456   ATGGAAAGGAAAAAC             GGCGGCC TGAG GGGCGCC              TTTTTTATGACTTGG 100 45
LQ332_RS14995 3277583 .. 3277602 +  -4.2  -3.80945   GTGTCTTGAAAGTAA            GGGCGGATC AAT GG-CCGTCC            TTCTCTTGTCTGCTC  56 32
LQ332_RS15000 NONE
LQ332_RS15005 3279113 .. 3279126 +  -3.1  -3.09516   ACGCGGGGAGCATGA               GG-CAG CGC CTGGCC               TTCGGTCATCGGGAC  41 307
LQ332_RS15015 NONE
LQ332_RS15020 3281979 .. 3282013 +  -2.2  -4.57073   TTCGCTAAGCCAACC   GA---GAGCTGGGGGGC GAAA GCCCCCTGGCTCAAATC    TTTTTCAAGCGCCTG  67 33
LQ332_RS15025 NONE
LQ332_RS15030 NONE
LQ332_RS15035 3286751 .. 3286770 + -13.6  -4.09864   GACTGAGCCCAAAAA            GGGCAAGG CAAC CCTTGCCC             TTTTCCAAAATCGAT  93 35
LQ332_RS15040 3287383 .. 3287398 + -11.8  -5.06414   CCCGCGCCGCATCCA              GGGCCC TTCG GGGCCC               TTTTTGTTGGGCGCG 100 51
LQ332_RS21200 3287899 .. 3287946 +  -4.8  -3.19653   ACGACAACCCAGTAG GCAAC-CCCGGTGGGGGCGATTT CTT GAATCCTCCCCACGAGCCGTTGC TTCATCCCATTCTCC  49 198
LQ332_RS15045 3288998 .. 3289023 +  -8.2   -2.9294   GGGCCGTCCGCTATT         GGCCCCAGGC CCTGCT GTCTGGGGCG          TGTGTGGCTGGTCTG  56 82
LQ332_RS15050 NONE
LQ332_RS15055 3294006 .. 3294023 + -14.1  -4.17048   AAGACGCTTTTCAGG             CGCGGCC CTCT GGCCGCG              TTCTTTTCAAGAGCC  93 89
LQ332_RS15095 3303895 .. 3303933 + -17.5  -5.14563   CCTGCCATCAGGGAG   ACGGCGCCCATCACGAT GGCTG ATCGTGATGGGCGCGGA   TTTTTTCCTGAACGC 100 49
LQ332_RS15100 3304387 .. 3304408 +  -2.2  -2.55351   GGTCGAACGCCGCTG           CGAAC-GCG TCTAT CGCTGATCG           GTTGCTGTCACACAC  38 7
LQ332_RS15105 3306071 .. 3306094 +  -3.8  -2.90075   TGATCAGTTCGTGGC          TG-ACGTCGGC CAG GCGGGCGTCCA          TCTGGTTCAGGCGGA  42 172
LQ332_RS15135 3312698 .. 3312748 + -15.3  -3.57462   CGCGTGGCGGGCAAT GGCGTGGCCGATGT-CGCCCAGGC GCGC GCCGGGGCGCACTGCGGCGATGCC TTTCCACATCGCCTG  83 358
LQ332_RS15225 3330414 .. 3330436 +   -12  -3.28791   GCCGGCAATCGCGCA           GGTGGACGCC CCC GGTGTCCATC           TTGTCGACCACGCCT  70 97
LQ332_RS15235 3332537 .. 3332561 + -18.6  -2.78547   GAATGAAAATGAAGG          CCGCACCGGG GAATG CCCGGTGCGG          TCATTCGTCGCGTCG  87 39
        gpmA 3334089 .. 3334106 + -14.1  -4.96501   AAGTAAGAAGCAGAA             GGCCGGC GCAA GCCGGCC              TTTCTTTTTGTAGAG 100 35
LQ332_RS15250 3336408 .. 3336437 + -20.1  -3.01712   CGTGAACGCGTGATG       CGAAAGGCCCGGC GAAT GCCGGGCCTTTTG        TCTTCCAGGCCGGCA 100 50
        creB NONE
        creC NONE
        creD NONE
LQ332_RS15290 3346439 .. 3346462 +   -11  -3.32343   CAAGCACTCTTCTGT          GGGTGCGAAC CGTG GTTCGCACGC           TTCTACCGCTGTCCA  70 62
LQ332_RS15295 3348196 .. 3348227 +  -5.9  -3.16881   CCCCTCCGTTGCCCG      GTTGC-AGTGCCCA CGGGC TGGGCAATCGCGAC      TTAATCCCCTCCGTC  49 70
        gltX NONE
LQ332_RS15305 3350276 .. 3350318 + -35.2  -3.84825   CCGGCATTTTGGAAA CGGGGTCAGATCCCTTTGCC AGT GGCAAAGGGATCTGACCCCG TTTCATATCGGTGCG 100 65
LQ332_RS15340 NONE
LQ332_RS15345 3358781 .. 3358799 + -17.4  -5.61596   CCGGTCCACGAAGAA             CGCGGCGC CTG GCGCCGCG             TTTTTTTATGCGCGT 100 54
LQ332_RS15365 3363668 .. 3363697 +  -4.1  -3.48276   CCCGGCACGCTGACA       GCGTAGTCACCGC GCTG GCGTAGACTGCGG        TTCTCTCCAGAAAAC  51 28
LQ332_RS15370 NONE
LQ332_RS15375 3364692 .. 3364712 +  -4.6  -2.78384   CCTGATCCAGATCAA           G-GCCGCTC AGCT GCGCGGCGC            TATGCTGGCGCGGAC  44 47
        ubiM 3366099 .. 3366115 +  -2.2  -3.17723   TGGTGACCAGGTCGG              CCAGCT TGAGC AGCTGC              TTGAGTTCGACGTAG  43 195
LQ332_RS15390 3368341 .. 3368359 + -11.6  -3.28712   TCGTGACGGCTTCAA             GCCGCGCG GCC CGCGCAGC             TTCTAAGCCGCAGCC  68 1
LQ332_RS15395 NONE
LQ332_RS15400 3370989 .. 3371013 +  -5.5  -2.55668   GTGAAGGGGCCGCCC          GCCGCTGGCTG AAC CTGACAGCGAC          CTTGGTCTACACGTG  45 14
LQ332_RS15405 NONE
LQ332_RS15410 NONE
LQ332_RS15415 3374803 .. 3374821 +  -4.4  -3.58343   TCGGCGATGTTGCGC             GCCTCGGC CGT GCCAAGGA             TTTCAGGGTGCTGCA  53 84
LQ332_RS15425 3376782 .. 3376804 +  -9.9  -2.71364   GCACCTCCAGCGCGT          GCTGCAGCGG CACA CC-CTGCAGC           TGCTTGGGAAGCTCA  56 383
LQ332_RS15440 3379483 .. 3379497 +  -2.8  -2.72324   CTTGCAAGAGGCGAG               GGAATG CGA TGTTCC               GTTGGTTTGAATCCC  40 175
        smrA 3381327 .. 3381373 + -10.1  -2.87211   GCCGATCAGTAACGG TTTCGGAGTCGGATCCCTTTC AGGAG GAAAGGGCTCTGACCCCGGCG TGTCTCAGGAGACCT  60 29
         agp 3382826 .. 3382838 +  -9.1  -2.54896   TGCTGGTTGAACCAT                GCAGG GTC CCTGC                TGCCTTCGATGACCC  51 231
LQ332_RS15465 NONE
LQ332_RS15470 3386860 .. 3386908 + -15.4  -2.82516   GCTGCCGCCCAACGT CTGAGGTCAAGGCTGATGCCGGCC GCC GGCCGGCATCAGCCCT--CGTCGG TCTCGTACTCGACGA  80 22
LQ332_RS15485 3389652 .. 3389668 +  -5.8  -4.78981   CGAAGCACGGCGGCT             CGCGACC TGGC GG-CGCG              TTTCTTTTGGTTACT  82 488
LQ332_RS15495 NONE
LQ332_RS15500 3392222 .. 3392243 +  -5.8  -3.99374   TCAACCCGCTTTCCG           GCGCAACG GGGTGA CGTTGCTC            TTCTTCTTCGTAGCC  64 96
LQ332_RS15515 3394865 .. 3394894 + -20.1  -2.93393   TGTCAGGGCGCAAAC       GAAGGAGCCGGGC AAAT GCCCGGCTCTTTC        ATTTCTGCAATCACC 100 86
         map 3424203 .. 3424220 +  -6.3  -3.02043   CTGTCGCCGGGCGAG             TCG-CAGG TCT CCTGACGA             TGTTGCCGGCGAGTT  48 11
LQ332_RS15645 NONE
        dapD NONE
LQ332_RS15655 NONE
LQ332_RS15660 NONE
        dapE 3430587 .. 3430606 + -13.6  -5.60993   CCGGACACCAGAAAA            CCCGCATC GGTC GATGCGGG             TTTTTTTGTGCCCGG 100 290
        asnB 3432476 .. 3432487 +    -3  -3.15544   TGATCGCCCCCCGTA                CATT GGGG AATG                 TTCATGGACGTACAG  43 114
LQ332_RS15675 3434287 .. 3434323 +  -4.4   -3.6502   TTGCGTTCGCCCCAG   CTGCGCTTGGCC-AGCGG TCC CTGCTTGGCC-AGCTCAC   TTTCGGTACGGCGTG  51 439
         bfr 3437202 .. 3437219 + -14.1   -4.7497   GCCGACAACGAAAAA             GCCGGGG AATG CCCCGGC              TTTTTCGTGCCTGAC 100 332
        emrR NONE
        emrC NONE
        emrA NONE
        emrB 3445437 .. 3445454 + -14.1  -4.67038   GTTGAAACGCAGAAA             CCCCGCC GCAA GGCGGGG              TTTTACTTTTGGGGG 100 53
LQ332_RS15730 3447471 .. 3447484 +  -9.5  -5.01535   CCGTGCATGAAAAAA               CCCGC TTTC GCGGG                TTTTTCTCATTCTCG 100 50
         rnr NONE
LQ332_RS15750 3451060 .. 3451077 + -12.7  -2.64616   ATGATCCACCTGCAG             GCCGAGC CCAC GCTCGGC              TGCTCTGGGTCCAGG  67 37
        rlmB 3451972 .. 3452013 + -23.3  -4.82667   CAGCGCGATGTGATC GGGGTCAGATTGCTTTTCC AATG GGAAAAGGAATCTGACCCC  TTTTTCATGTCCTGC 100 46
LQ332_RS15775 NONE
LQ332_RS15780 3459035 .. 3459047 +  -4.7  -3.64866   GCCGCACGCGGTGAC                GCCCG GGC CGGGG                TTTGGCCTATCATCT  55 49
LQ332_RS15785 3462332 .. 3462342 +  -2.4  -5.00846   GCGCCGCGACACGCT                 GCTG CTC CCGC                 TTTTTCTGATCTTTC  79 143
LQ332_RS15845 3473738 .. 3473770 + -18.4  -3.72576   ACCCTTGTCCATGTA      CGCGGACGGCGGGC CTTGT GCCCGCCGTCTTCG      TTTCGTCACGACACA  93 52
LQ332_RS15865 3476509 .. 3476543 + -20.9  -3.55563   AATCGAAGCAGCAGA    C-GAAACGCGCCGGTG ATTC CACCGGCGCGTTTCTG     TTTGCGCAGTGCGCT 100 40
LQ332_RS15870 NONE
LQ332_RS15875 3478340 .. 3478360 + -11.9  -3.29511   CGCGCGGGGTCGGAT            CCGTTTTCC AAC GGAGAACGG            TTCTGACCCCATCAA  71 43
LQ332_RS15885 3479943 .. 3479960 +  -6.9  -2.90496   CCGGCGCGGGCCTGC             CGGCCGT GCCT ACGGCCC              TCCTTTCCGACCGGC  49 97
       rlmKL 3482159 .. 3482212 + -23.9  -2.78384   CGGTTGGGGTAACGC GACGCCCGGGGCCCGAGCCCTTGCGT TGC ACGCAAGGGCTCCGACCCCGG-TGGC TCTGCTACAGCACCG 100 29
LQ332_RS15925 3490025 .. 3490050 +  -4.7  -3.60395   GCTGTTCGCCCTTTG         TAG-AGTCGAGC CTT GCTCGACTGCCG         TTCGTTCTTCTGTGG  55 59
LQ332_RS15935 3492712 .. 3492729 + -10.5   -3.2794   GGCTGACTGTAGAGC             TGCCGCG GCGG CGCGGCG              TTGATCTGGATCAAG  65 511
LQ332_RS15950 3494997 .. 3495034 + -12.7  -2.87132   CGAAACGCAGTAACC   AACGATCAGCAGGTGAC AGCC GTCGCCTGCTGGTCGGC    TGTCTGCGGAACGGG  69 28
LQ332_RS15965 NONE
LQ332_RS15970 3500565 .. 3500616 +  -4.9  -2.57132   ATAGAAAAATCCGCC GCCGGGGGGTAGGCTGGC--AGCCG TCGC CGGCCCCGCCGGCCCCCCTTCCCGC ATTCTGGAGCACCCG  43 50
LQ332_RS15975 3501790 .. 3501821 + -15.2  -2.89881   CCACCGCCAGGCGCA      TGTCGAAGGAGGCC GCAG GGCCTCCTTCTGCA       TATGTGCAGTCCGTG  77 74
LQ332_RS15980 NONE
LQ332_RS15985 NONE
LQ332_RS15990 3506217 .. 3506252 +  -8.8  -2.64794   GCGGGCCCGACCCGG    TGGGC-GCCGCGGCACG GTG CGCGCCGCCACAGCCCG    TCATATCCCCTTCGG  53 70
        potA NONE
LQ332_RS16000 NONE
LQ332_RS16005 NONE
LQ332_RS16010 3511169 .. 3511199 +  -3.2  -3.28924   TTCGCGCTTGAGCTC       GTACAGCCGCACCA CGG TGCTGCGCTTGTAG       TTCTCGGCGAAGATG  47 521
LQ332_RS16055 NONE
LQ332_RS16060 NONE
LQ332_RS16065 3520809 .. 3520841 + -21.3  -3.53761   CCTGGATTGAAGGCA      GGGGGTCGGATCCCC GCA GGGGCTCCGATCCCC      TTTACCGGGGACTTA 100 31
LQ332_RS16080 3524086 .. 3524108 +  -9.1  -2.52464   AGGTGCTGGCTGTGC           CGCCGGTCA CAGGC TGAGCGGCG           TCGCTTGGCAAGCCC  55 9
LQ332_RS16085 NONE
        petA NONE
LQ332_RS16095 NONE
LQ332_RS16100 3527965 .. 3528016 + -12.3  -2.78384   TTGCACACTCGGGGA GGAG-TCGACCGCCGGCA-CGGTGCC GGC GGCGCCGATGC-GGCAGGCGGTCTCC TGTCGTGGGAGAGCC  65 89
LQ332_RS16105 NONE
LQ332_RS16110 3529218 .. 3529237 + -16.4  -5.27938   AAGTAACCATTCCGA            CGCCGCCC CGAT GGGCGGCG             TTTTTCTTTGCCCGT 100 35
        purE NONE
LQ332_RS16140 3533692 .. 3533721 +  -6.3  -3.62096   GGCAATGCAACGATG       TGGCGCGCCGGTG CAGG CATTGGCGCAACA        TTTCCGGTGGTAGCG  57 64
LQ332_RS16145 3534117 .. 3534159 +  -8.2  -3.36327   GTGACGCTCCGCTCT GCATTTCGGTAGTGCCGGCC GCT GGCCGGCAACCCCGGCATCC TTGTACGTCCAGTGG  60 37
        grxD NONE
LQ332_RS16160 3536064 .. 3536090 +  -3.6  -3.16683   ATTGCGTTGCGAACC         GGTGCCGTTTGT CGC ACAACCGTCACA         TTGATGGCGTAGCGT  43 76
LQ332_RS16165 3539481 .. 3539500 + -16.4  -4.27316   TGCTGTAAATGGAAA            CGGCCGGG GAAA CCCGGCCG             TTTTCCGTTCAGGCG 100 57
        ppnN NONE
LQ332_RS16175 NONE
        pilV NONE
LQ332_RS16185 NONE
LQ332_RS16190 3543908 .. 3543922 +  -2.1  -3.32343   GTCGATCGATTCCAT               CTTCA AGCCC TGAGG               TTGTCGGCATGTCCC  45 13
LQ332_RS16195 NONE
LQ332_RS16200 NONE
LQ332_RS16205 3548410 .. 3548427 + -12.7   -6.3578   CAAGATGCAAAAAAA             GCCGCGA TGAC TCGCGGC              TTTTTTTTTTGCAGT 100 40
        uvrB 3551151 .. 3551165 +  -5.6  -2.73875   CCAGCCTCGGCTGAA               CGTGGC AGT GCTGCG               TCATCTTCACAAAAG  46 27
LQ332_RS16220 3551369 .. 3551386 +  -9.8  -4.65895   TCGTGAACTGCAAAG             CCCGGC CCTGGC GCCGGG              TTTTTACGTAACAAG  88 63
LQ332_RS16225 3551546 .. 3551563 + -14.1  -5.27477   GTGGAAACGATGAAA             GCCGGCC CCTG GGCCGGC              TTTTTTCGTTCCGAT 100 67
LQ332_RS16235 3552400 .. 3552410 +  -6.8  -3.08996   GCAGGCTGTGCAGGG                 TCGC CTG GCGA                 TGTTGCCTGGCCGTC  48 157
LQ332_RS16245 NONE
LQ332_RS16250 3554892 .. 3554915 +  -8.8  -3.64371   CTGCCGATGGCGGCA          CGCT-GGCGTC ATG GCCGCCGAGCG          TTTCCCGTCTCCCTT  65 75
LQ332_RS16255 NONE
LQ332_RS16260 NONE
LQ332_RS16265 NONE
        msbA NONE
        lpxK 3561161 .. 3561172 +  -7.2  -3.17075   CGACCGAACTGAGCG                GCGC GGTG GCGC                 TTGCATTCACGCGCC  51 29
        kdsB NONE
LQ332_RS16285 NONE
LQ332_RS16290 NONE
        uvrC NONE
        pgsA 3566388 .. 3566433 + -23.5  -3.16564   AGCTGGGCAACTGAG CC-TGGGGTCGGATCCCTTTCC GCA GGAAAGGGCTCTGACCCCACGG TTGCTGCCATCCACG 100 27
LQ332_RS16310 3567846 .. 3567863 + -10.5  -5.00138   CAGATTCAAGAAAAA             CGCTCCC GCAA GGGGGCG              TTTTTCGTTTGCGTA 100 39
LQ332_RS16315 NONE
LQ332_RS16320 3569279 .. 3569296 + -10.5  -5.05505   CCAGATTCAGAAAAA             CGCTCCC GCAA GGGGGCG              TTTTTCGTTTGTCAT 100 38
LQ332_RS16325 NONE
LQ332_RS16330 NONE
LQ332_RS16335 NONE
LQ332_RS16340 3574085 .. 3574095 +  -2.4  -3.70902   GCGATCAGCAGGCGC                 AGCC ACA GGCG                 TTTCAGTCTCCACGG  53 221
LQ332_RS16355 3574926 .. 3574947 + -13.7  -4.82901   CCGCTCCAGATTCTA           CAGGGCCCC GACA GGGGCCTTG            TTTTTCTCCCGCCAC 100 33
LQ332_RS16360 3575149 .. 3575161 +  -9.1  -4.73682   CCATGTTCCGACAGG                CCCCA TCT TGGGG                TTTTGTCTTGTCAGG  91 38
LQ332_RS16365 3575285 .. 3575304 + -13.6   -5.4833   GCCTCCAATTGAAAA            GCCCTGAC TCCG GTCAGGGC             TTTTTTCTTGGCTGC 100 33
LQ332_RS16370 NONE
LQ332_RS16375 3577120 .. 3577138 +  -6.6  -3.51825   CACCGTCTGCATGTG             CGGCACGA TGG TCGGGTCG             TTGTGGTTGAACTGG  55 346
LQ332_RS16385 3578869 .. 3578904 +  -3.2  -2.52464   GCCGCCCACTCAATC    GCCGATTTCGATACGA TCTC TCGCATTGAGTTCGCC     TCGCTTGACCCGAAG  39 63
LQ332_RS16390 3580189 .. 3580233 + -17.7  -2.52516   GGTTCGCTGATTCGA TGGCGAACGCCGAGGGCAGGC ACC GCCTGCCATCGACGAACGCCG GTTCGTCCTGGCAGG  83 454
LQ332_RS16405 3581039 .. 3581056 +  -3.3   -4.4009   AACACAGTCCGAACA             GGCGTGAG TTA CGC-CGCC             TTTTGTCGCATGCAA  66 19
LQ332_RS16410 3581763 .. 3581794 + -13.8  -3.13403   GCGGACTGCAGTAGC      GCACCAGGCCCGG CCCGAAA CCG-GCCTGGTGC      TGTTCCTGCGCACAG  72 154
LQ332_RS16425 NONE
        hemN 3585206 .. 3585235 +  -4.9  -3.30443   GGCCGGATTGCGGAA       CGGCGGCGGCA TGCTTAAC TGTCGCTCCCG        TTCATGTCATAGTCC  51 189
LQ332_RS16440 NONE
LQ332_RS16445 NONE
LQ332_RS16450 3588835 .. 3588856 + -10.9  -3.48276   GCTAATGTCCCTGTA           GC-GTCGAGC CAT GCTCGACTGC           TTGTCTGGAACGAAG  72 36
LQ332_RS16455 3589649 .. 3589684 + -10.4  -2.70932   AGCGGCAGGCGCTTG    AGCGTGGCAGCGACCGA CGC TAGGTCGTTGCC-CGCG    TCCTTGCCGAGCAAC  56 304
LQ332_RS16470 3591783 .. 3591829 + -17.2  -3.05022   CAGGTTTCGGGTGCC TGCCGGGGCCGGATCCCTCTGC CGT GCAGAGGGCTCTGACCCCTGAA TCTGTCTGTGCGGGC  88 297
LQ332_RS16475 3592614 .. 3592627 +  -9.5  -3.29144   AGCCGTTGCCGGAGC               CGCGC CCGA GCGCG                TTCTGACCGCGCTCC  62 6
LQ332_RS16480 3593866 .. 3593885 + -11.4  -2.78935   ACAATGGCGTCACGG            CCCGTTGC AGCC GCGACGGG             TCTGATGGGGGCTCT  64 41
LQ332_RS16485 3594767 .. 3594788 +  -5.1  -2.62184   AGAGGCGTCAGCAGC           TGCGGCAGGC GTG GCCT-CAGCA           TCCTGTCCAGGCGCC  42 377
LQ332_RS16500 NONE
LQ332_RS16505 3598561 .. 3598612 +   -24  -2.79574   GAAAGGGATCTGACC CCGACAATCGAAAAAAGCCCGCCGG ATT CCGGCGGGCTTTTTTC-ATGGTCGA TCATTCCTCGGTATC 100 77
LQ332_RS16525 3603566 .. 3603592 + -20.2  -4.08216   CAAGGGCTGCGCTCC         GGAACGCCCCGC CCA GCGGGGCGTTTC         TTTTGAGGAACGTGG 100 69
LQ332_RS16530 3605587 .. 3605617 +  -8.3  -2.70932   AGCGCGCGCCTGACT      TGT-GAATGGGGGC TTCG GCCCCCATCCTGCA       TGCTTAAACCCCCAG  53 28
        kdsA 3606480 .. 3606495 +  -2.4   -3.6502   CGCGGTCACCAAGAA              GCACGG CTTC TCGCGC               TTTGCGTGAGCCGTG  50 1
LQ332_RS16540 3606902 .. 3606947 + -12.5  -3.55444   TGATCGCGCTGGCGC TGGCG-GCGCGTTGCTGGGCCA GTC TGGCCTGACGGCGCCCGCGCCA TTTGGCAAGTGGCGG  75 79
         eno NONE
        ftsB NONE
        ispD 3609379 .. 3609401 +  -6.8  -3.07816   CGCGCCGGCTGACTG           CCCGCGCGGC CCT GCTGCAAGGG           TTGCATCCATGAGCA  51 29
        ispF 3609892 .. 3609923 +  -3.6  -2.83899   ACAGGCGGTCGTGTT      GCTGGTGGCGGC ATGATCCC GCTGCCGTTGGC       ATTTGGTGCGCCGTT  41 10
        truD 3611036 .. 3611052 +  -2.1  -3.60048   ACAGTTGACTCTACC              TGGACAC ACG GCGTCCC              CTTTTTTCAGCGCCG  50 126
        surE NONE
LQ332_RS16580 NONE
LQ332_RS16585 NONE
LQ332_RS16590 3615140 .. 3615195 + -16.7  -3.54129   CGCCGGATGCGCAAG CGCCGAGCCGCGCCCGGCGTCCTCGCC TGGT GGCGTCGG-GCCGGGCGAGGCGCG-CG TTTGAGAGACGTATC  91 489
LQ332_RS16595 3616186 .. 3616205 +  -4.9  -3.27029   GGGACGATCAGCCGC            GCGGCAG CACGAT CTGACGC             TGTTCCTTGCTCGGG  49 449
        rlmE NONE
        ftsH 3619207 .. 3619236 + -15.7  -3.55622   GTTGCACGTAACACC       AGACGAGGCCGGG GCAA CCCGGCCTTGTCG        TTTCCGGGCCTTCGG  90 47
LQ332_RS16620 3619494 .. 3619520 +  -3.7  -2.71011   CGGCAGGGCGCGTTC        CCGTCAGCACCGT AGC GCGGTG--GGCGG        TGATTCCCGCCGCGT  42 49
LQ332_RS16625 3620148 .. 3620174 +    -8  -2.92192   GCGCCGACGGACAAC        GCGCGCCTCGG CGATTT CTGAGG-GCGC         TGTCGTTACCTCGGA  54 5
        folP 3621239 .. 3621271 +  -5.3  -2.53263   CGCCGACGATCCGCT      GGCCGGACGAAGACT GAT GGCCATCGACCGGCG      TCCGTTGGCGATCGC  43 9
        miaA NONE
         hfq NONE
        hflX 3623965 .. 3623979 +  -4.2  -2.85999   CAGCCGTGCCGGAGG               GGCG CGACATC CGCC               TGTCATCTGCGGTAC  43 85
LQ332_RS16650 3624522 .. 3624551 +  -5.7  -2.62184   CGCCCAGCTGTGACA       TGC-TGCCCCGG TAACCGT CCGGAGCACGCA       TGATGTGGGAAACGC  45 28
        ubiB 3626274 .. 3626290 + -13.7  -2.69528   AGCGATTCCCGTAGA              GCCGACC GCT GGTCGGC              TGCCTTTGCCTTTGC  71 63
        lexA NONE
        recA NONE
        recX NONE
        alaS 3631742 .. 3631767 +  -5.4  -3.06133   TGACGGAGCGTCAAG         CCG-GTGGGGG ATACC CTTCCACACGG         TTCCATGGAGACTTA  47 127
        csrA NONE
LQ332_RS16685 3632175 .. 3632201 +   -21  -5.38054   CCAGATACAAAGAAG         CGCCTGCAGATC CTC GATCTGCAGGCG         TTTTTCTTTATGGCC 100 38
LQ332_RS16695 3635216 .. 3635256 + -29.9  -3.08813   GCATGCCGTAGCGTT  GCGGTGTTCACCACGCCCG CGA CGGGCGTGGTGAACACGGC  TGTCTTACACTGCGG 100 30
LQ332_RS16710 NONE
LQ332_RS16715 3640239 .. 3640253 +  -7.8  -3.34902   CGCTGCCGAGTCACG               CAGCGG CGC CTGCTG               TCTTCTCTCCTGCAA  58 127
LQ332_RS16720 NONE
LQ332_RS16725 3644838 .. 3644860 +  -9.9  -4.57073   CCGGTCTGTGCTGTA          G-AGCCGAGC CCAC GCTCGGCTGC           TTTTTCGGGGCAATG  86 46
LQ332_RS16750 3653141 .. 3653151 +  -3.2  -2.78384   GGGGATTAAGTCGCA                 TCTG CCA CAGG                 TGTGCTGCAAACGAC  40 55
LQ332_RS16760 3655259 .. 3655288 + -16.4  -3.50853   GGTGCAGCACGTAAG       CGCCCGCGATGC ACGGAG GCACCGCGGGCG        TTGTGGTTACAGCGG  91 72
LQ332_RS16770 3657484 .. 3657500 + -12.3  -2.76964   GGTCGGCACGGTAGA              TCCACGC CAT GCGTGGA              TGCTCTTCGATCTCG  65 452
        dapA NONE
LQ332_RS16830 3665506 .. 3665523 + -14.1  -4.45544   CCGGAAAACGCAAAA             GGGCGCC CAAG GGCGCCC              TTTTCGTTGCTGCAA 100 158
LQ332_RS16840 3667674 .. 3667690 + -10.8   -4.7629   CCGGAAAACAGAAAA              GCCCGC ACGAG GCGGGC              TTTTTCGGTTCCTGC  95 213
        pcnB NONE
        folK 3669720 .. 3669737 +  -5.5  -3.29511   ATAGGGTGATAATGC             CCGGG TTATCTCC CCCGG              TTATCAGCACATGAG  51 32
        panB NONE
        panC NONE
LQ332_RS16870 3672004 .. 3672025 +  -2.2  -4.08317   CCCCTGACGACGGCC           AAGCGGGT GCTAGA ATCCGCTC            TTTCCTTTGCCGTTG  58 66
LQ332_RS16875 NONE
         pgi 3673943 .. 3673981 +  -8.9  -2.77235   CAGCTGAAGCGCTGA  TGCCCTGGTAGTGCCGGCC GCT GGCCGGCA-T-CCAGGTGA  TGCTTCAATCGTTCA  53 26
LQ332_RS21205 3674583 .. 3674621 +  -8.9  -2.77235   CAGCTGAAGCGCTGA  TGCCCTGGTAGTGCCGGCC GCT GGCCGGCA-T-CCAGGTGA  TGCTTCAATCGTTCA  53 499
        ispG NONE
LQ332_RS16900 3678881 .. 3678891 +  -4.6  -2.53876   GCTTGCAGGGGTATC                 GGCG CCC TGCC                 TAGCTTGACCTGCAA  43 176
LQ332_RS16905 3679823 .. 3679864 + -18.9  -2.52023   CGCGCGCTCGCAGCC TGGGGTCGGA-TCCTTTCCC GGC GGGAAAGGGCTCTGACCCCG ATCTTCATGTCAGTG  89 269
        ugpC 3687375 .. 3687403 + -10.4  -3.16564   AACCTCAACCCCGCA       TGGT--TGCCGGCC AGC GGCCGGCACTACCA       TTCCTGCACTCACCC  63 66
LQ332_RS16945 NONE
        sdhC NONE
        sdhD 3689334 .. 3689344 +  -8.2  -3.05384   TGCGGTGGGCCGCAT                 CGCC CTC GGCG                 TTGCCTGAGCCCAGG  57 7
        sdhA 3691152 .. 3691166 +  -3.5  -2.82516   ACGTGTCCGTGGTGC              CGC-CG AAGC CGCGCG               TGTACTGATCCGACC  41 3
LQ332_RS16965 3692051 .. 3692101 + -15.4  -3.91196   GCGGTATCTGGTAGA GCCACGCGACGCGTGGCTGTGC CACCCCA GTAGAGCCACGCCATGCGTGGC TTTGCTGTATCTGGA  93 50
LQ332_RS16970 3692397 .. 3692414 +  -9.1  -3.13403   CCTCGCGGCTGCAGG             CCGCC-GC CCA GCTGGCGG             TGTTGCTGGCCGCGC  60 49
LQ332_RS16975 NONE
LQ332_RS16980 3694016 .. 3694028 +  -3.3  -3.36505   CACGCACCCAGCCGG                CGGAG GCC CTGCG                TTATGAATAAGGTCT  47 3
        lolD NONE
LQ332_RS16990 3695465 .. 3695487 +    -7  -4.45544   GGAACGCACGATGTT          CCGGC-GTC CGCGGC GACAGCCGG           TTTTCGTTGATCAGC  79 189
LQ332_RS17010 3698624 .. 3698647 +   -11  -4.07568   ACTGCCGCGCCTGGT          GGGTGCCAAC CTTG GTTGGCACGC           TTTTGGGGCGCCAAC  81 64
        rsmD NONE
        coaD NONE
LQ332_RS17030 3702999 .. 3703028 + -20.7  -2.91276   CGCCGCTGATGACCT       GACCGGCCCGCGC GCCC GCGCTGGCCGGTC        CTTTGTCCCAAGGCG 100 95
LQ332_RS17035 NONE
         ggt 3705116 .. 3705135 + -12.1  -4.67608   CGGTTGATACCGAAA            CCCCGCC TTTGCC GGCGGGG             TTTTCTGTTGCCGTC 100 71
LQ332_RS17045 3706073 .. 3706110 + -11.3  -2.91264   GGCGCGCGCCCTGGG   GTAATGGAATGGCCGGGC AGT GCCCGGCCAT-CCATGGG   TGTGTCGATCCACGC  64 22
LQ332_RS17060 NONE
LQ332_RS17065 NONE
LQ332_RS17070 NONE
LQ332_RS17075 3713166 .. 3713187 +  -7.2  -3.05993   CCCTGGCTATCATGT           CCGCCTTC AACAAC GGGGGCGG            TGTCTGTGTCGGTAG  51 88
LQ332_RS17080 3714673 .. 3714689 +  -2.2  -2.87798   GTGACCGATCATCAT              CCCG ACATCGCAC CGGG              CTGTTTATTCTCTCT  40 90
LQ332_RS17085 3715483 .. 3715502 + -10.7  -4.55287   CAGCCGGAACGAAAA            TGCCGCC CTTGCA GGCGGCA             TTTTCTGTAGGTGCC  89 64
LQ332_RS17095 3717463 .. 3717485 +  -7.7  -3.14527   TTTCCAGGATCCGCT          TGCCGCTGCT TTCC AGC-GCGGCG           TCTTCCTGCGCCTTC  53 96
LQ332_RS17105 NONE
LQ332_RS17110 3719580 .. 3719590 +  -3.2  -3.35813   CCCTTCGTGGCGCGA                 TACC GCA GGTG                 TTGCTTGACCTCGAC  47 7
LQ332_RS17115 3720951 .. 3720966 +  -6.8  -3.80114   CCCCGCTTAGCTGCC              GGC-GCC AGC GGCAGCC              TTTCCTGCCTTCGTC  62 63
LQ332_RS17120 NONE
LQ332_RS17125 NONE
LQ332_RS17130 3726434 .. 3726459 + -19.1  -4.56978   CTGCAGTAGACCCGG         GGGACGGAAGC GCTG GCTTCCGTCCC          TTTCTTCTTTCAGGG 100 32
LQ332_RS17140 3727451 .. 3727496 +  -5.3  -3.39327   CCGCGGGCCCTGCGG GGCCTTCACCTGGGTACGG GTGTCCTG CAGCACGCGGGTGAATGCC TTGTAGGTGTCGCCG  49 225
LQ332_RS17150 3729818 .. 3729870 + -11.9  -3.30124   GGGCGGCCGCGCGCA CCGCCTGCG-CGGTGGTGGCCACG CCCAGC CGTTGCCGCGCTCGACGCAGGTGG TTCTCCACCGTGCGC  66 84
LQ332_RS17170 3734304 .. 3734320 +  -7.9  -3.53012   GGAAAAGCCCGGAAA              CCCAGGC CGA GCGTGGG              TTTCCGGAAGCCCGC  60 237
LQ332_RS17175 3734966 .. 3735000 + -22.2  -3.35015   CGGGGACATAAAAAA     GCCCGGGAACCCTTGT TAT GCGGGGGTTCCCGGGC     TTCTCCGGTCCTTGA 100 148
LQ332_RS17190 3740210 .. 3740227 + -14.1    -5.252   ATTGCTGAGATCTGA             GCCCCGC AGAT GCGGGGC              TTTTTTCTGGCCATG 100 116
LQ332_RS17205 3742789 .. 3742811 +  -9.1    -5.626   GGCTACTGAATTCTA          G-GGCCCCGC AGAT GCGGGGCTTC           TTTTTTTATAGCCTC 100 32
LQ332_RS17210 3744361 .. 3744379 +  -2.3  -3.66356   CTACTGGTGATGGAT             CTGGACC ATGAC GTTCCGG             TTTCCGGTTGGACCT  50 15
LQ332_RS17215 3745377 .. 3745399 +    -4  -4.84359   CCAAGGTCTCTATCT           GCTTCCTGCG CAT CACAGCAGGC           TTTTTGTGAAAGTAG  81 237
LQ332_RS17225 3747595 .. 3747618 +   -11  -3.00923   GGATAATTCATCCAA          GCAGGGGCAGC TTA GC-GTCCCTGC          TGTCTCATCTTGGGA  65 35
LQ332_RS17230 3749168 .. 3749195 +  -3.7  -3.53019   ATCGGCCGTCGGTTT        TTTTGCAATAAT ATTTA ATT-TTGCAAAA        TATTTCGGTTTATGA  51 357
LQ332_RS17235 3749977 .. 3749993 +  -3.7  -3.95214   TGTTGGCATGAAGTG              CGAAG CCATCTC CTTCG              TGTTTTTCGATGGCT  60 408
LQ332_RS17240 3750560 .. 3750582 +  -2.7  -4.07568   TTGGTTGATTCGCAG          CGGTGG-ATG TGGG CATTCCACCC           TTTTCACAGGGCGAG  58 221
LQ332_RS17245 3751137 .. 3751160 + -15.4  -3.62723   TTGCCAGTGCTCAAT          GCAGACTTGG GTGG CCAAGTCTGC           TTCCTTCTTTGCGTC  83 242
LQ332_RS17260 NONE
LQ332_RS17265 NONE
LQ332_RS17270 3754907 .. 3754917 +  -4.6  -3.56821   GCGTCCTTCGATGTG                 CGGC AGT GCTG                 TTTGCGCCATGTAGT  54 248
LQ332_RS17285 NONE
LQ332_RS17290 3757281 .. 3757299 +    -8  -3.72576   GCTGTGGGGGTTGCC             GTGGCTGC TCC GCCGCCGC             TTTGCTCGAAGGAAG  65 228
LQ332_RS17295 3758981 .. 3758995 +  -5.6  -3.93984   CGTATCGGCCAATTT               CCCCCA CGT TGGCGG               TTTGTCCGTCGCTTT  60 417
LQ332_RS17310 3762251 .. 3762268 + -14.1   -3.6608   GATATACAGGCGAAG             GCCCCGG CGAG CCGGGGC              TTTAGCTAACCTCGT  84 39
LQ332_RS17325 3766044 .. 3766088 +   -18  -3.35679   CACCAGGGCGCCGAT GCGG-GCGGTCATGCGTCGCGG TTG CCGCGACGCATCA-CGCGCTGC TTCTCGATCGCCCAG  87 474
LQ332_RS17340 NONE
LQ332_RS17345 3767331 .. 3767344 +  -5.9  -4.13244   TTGCGGACGGGCAGG               GGGCT CAGC GGCCC                TTCTTCTTCTTGTCC  66 57
         fur 3768277 .. 3768294 + -14.1  -4.90266   CCGCCAGCGACGAAA             CCCCGGG CCTG CCCGGGG              TTTTTGGTTGATGGG 100 55
LQ332_RS17365 3770705 .. 3770732 +   -12  -3.05384   CCGGGCCCACGCGCT        GCT-CTGCCGGCC TCA GGCCTGCAGCAGC        TTGCGTGCGGCGGCG  69 124
        hrcA NONE
        grpE NONE
        dnaK 3776254 .. 3776278 + -17.2  -3.32963   TGATCCGGACCGACG          CGGGACGCTG CCAGC CAGCGTCCCG          TTGTCGCATCAGGGT  93 38
        dnaJ 3777549 .. 3777567 + -17.4  -4.55798   AGTGTTGGGCGGTAG             CGCCGGGC CAT GCCCGGCG             TTTTCGTTTGCGATC 100 54
LQ332_RS17400 3779870 .. 3779914 + -20.9  -4.48299   CTGTCGGAACAGCTC GTGGGGTCAGATCCGTTTTCC GAA GAAAAACGGATCTGACCCCGA TTTATTTCGGTATCC 100 245
        pdxY NONE
LQ332_RS17410 3782471 .. 3782510 + -11.4  -3.53444   GCAGTGCTAGATCGT  CAGCCTC-AGCTCACCACC GCT GGTGGTGAACTCGCGGCCG  TTTCGCACCAGATGA  72 277
LQ332_RS17440 3789768 .. 3789798 + -18.3  -3.33696   GCCCGGCACCGAAGG      CG-CGCGCGGTGGC CTGA GCCGCCGCGCGACG       TTGCTTCACCGCAGG  93 9
        queA 3793485 .. 3793523 +  -8.6  -2.52896   CGGACCTGCCGGAAC   CCGGGAGGAAAGCCACGC ACG GCGTGGCTCCGCAGCCGG   TCCGTTCAGGCCTGA  53 84
         tgt 3794743 .. 3794781 +  -3.1  -2.71731   AACCCGGACGCCCCC  TGCCAAACGGCCCAAGG ACGAACG CCCGGGGCCGT--GGCA  TACTTCAAGGCTGAC  40 39
        yajC NONE
        secD NONE
        secF 3798151 .. 3798166 + -11.8  -5.36441   GCGGCACACAGAGAA              CCCCGC GCAC GCGGGG               TTTTTTGTGTGCAGG 100 54
LQ332_RS17480 3799598 .. 3799625 +   -20  -3.68351   CATGACCTGATCAGC        GAAAAGGCCGGC GAAC GCCGGCCTTTTC         TTTGGGTAGTGCCGG 100 31
LQ332_RS17500 3804769 .. 3804794 +  -3.9  -4.17048   TCGGCGTGTAGAGCT         GGCCG-CGCG GGTTGAG CGCCACGGCC         TTCTTTTCCAGCACC  63 200
LQ332_RS17510 3805629 .. 3805652 + -18.2   -5.4505   GTTGGGTAGCCAGAA          CGCCGGAAGC GAAA GCTTCCGGCG           TTTTTTATTGCCCGC 100 54
LQ332_RS17515 3806476 .. 3806496 +  -4.5  -3.02144   CTCAGCGGCAATTGA            GGCGGGCGG CCG TCGCCCCCA            TCTTCAACGCCATGG  44 26
LQ332_RS17520 3808139 .. 3808159 +  -2.6  -3.72576   GACGGGCGTTCGTGA           TCTG-TTGC GATC GCAGGCAGA            TTTCATCCGCGCAAG  53 91
LQ332_RS17525 NONE
LQ332_RS17530 3811249 .. 3811261 +  -3.3  -3.44051   GGCCGTGGGCGTCCA                GGCCA AGG TGACC                TTCTGATGGTCGCGC  49 7
        aroD NONE
LQ332_RS17540 3813534 .. 3813544 +  -6.8  -2.80443   AGGCGCTGAACCCCA                 TGCG CTA CGCA                 TGTCATGCAATGTGC  49 32
LQ332_RS17545 NONE
LQ332_RS17550 NONE
        pcaF NONE
        pcaH NONE
        pcaG NONE
LQ332_RS17570 NONE
        pcaD NONE
        pcaC 3820277 .. 3820310 +  -7.3  -3.07994   GCAACCTCCTGCACA     TC-GGCAAGGCCGGCC GCT GGCCGGCACTACCAGA     TTCAGTGCAGTTCAA  55 57
LQ332_RS17595 3824881 .. 3824891 +  -8.2  -3.22475   GGCCGGGCGCGAGGT                 CGCC AGC GGCG                 TCTTCTGCCAGTCCA  56 379
LQ332_RS17610 3828354 .. 3828365 +  -2.2  -2.55351   AACCCGTACAATGTC                CGGA TGCC TCTG                 ATTACTCTGCAGAAC  38 216
LQ332_RS17615 3830245 .. 3830265 +  -9.7  -3.16564   AAGGCTGAGTATCGG            TCGGCGC CAGCAGT GCGCCGA            TTGATCGGATGGAGA  60 33
LQ332_RS17630 3832651 .. 3832681 +  -3.9  -3.53012   GGCGAGCGACGGCGC      CGCCGCC-GGCATGC GCG GCG-GCCTGGTGGAG      TTTGCCACCCGCCGC  51 72
LQ332_RS17635 NONE
LQ332_RS17640 3839229 .. 3839262 + -17.4  -5.40072   AACGTGTTGTGGTGT     GGGGGAGGCCGGTC GTAGTG GGGCGGCCTCCCCC      TTTTTTTGCCGGGCA 100 49
         cmk 3844865 .. 3844888 + -12.4  -4.30576   AGTGCTGTACCCGCT          CCGTCGCGCA ATGA TGCGTGGCGG           TTTTCCTACTACACA  95 92
        rpsA 3846713 .. 3846736 +   -21  -3.57462   TTGTTGTTTCCTGGA          CGGCCCGGGC TTCT GCCCGGGCCG           TTTCAGGCTGAGATG 100 56
LQ332_RS17685 NONE
LQ332_RS17690 NONE
        lapB NONE
LQ332_RS17700 NONE
LQ332_RS17705 NONE
        galU 3852604 .. 3852660 + -21.1  -3.33162   AGGGCGGAATCAAGG GCAAGAGCAAAAGCAAAAAAGGCAGCC GAT GGCTGCCTTTTTTGCTTGTGGGGTTGC TTGTGGGGTCGGATC 100 221
         ndk NONE
        rlmN NONE
        pilW NONE
LQ332_RS17745 3860849 .. 3860864 +  -2.4  -3.55622   TCCGTTGTCCCGGTT              TCGCAC TGAG GCGCGG               TTTCACCACCTTCGA  47 17
LQ332_RS17750 NONE
        bamB NONE
         der 3864192 .. 3864209 + -14.1  -4.63952   AGTGATTCACGGGAA             GGCGGCC GCAG GGCCGCC              TTTCTTGTTTGTGGT 100 36
        moeB 3865621 .. 3865634 +  -8.1  -3.42378   CAACATGCGTGCTAT               TGCCG TCAT CGGCA                TTGCTCTATTGTTGA  58 153
LQ332_RS17770 3867686 .. 3867716 +   -11  -3.06261   AACGTTTCGGCGTCA       TGGGGGTGCCGGCC AGC GGCCGGCACTACGG       TGTTGGGAATTGCCG  66 198
        folD 3868923 .. 3868936 +  -2.3  -3.33815   CATTGGCCTGCTCCT               GGTAG GTGC CAACC                TTGGTTGGCACACAT  45 61
        guaB 3870618 .. 3870646 + -15.4  -3.95073   CGCGGGCCGAGCAAA        GAGGAACGGGGA AGCAC TTCCCGTTCCTC        TTTCTCCATCTGCCG  95 41
        guaA 3872282 .. 3872305 + -19.6   -2.6927   AATGAGTTGATAGAA          CGAGGGCGCC GAGA GGCGCCCTCG           TCGTATGTGAGGACT  90 36
LQ332_RS17790 NONE
LQ332_RS17795 3874848 .. 3874858 +  -4.6  -3.91412   TACGACATGCTTTGT                 GGCG AGA TGCC                 TTTGTGGAGTGTCCT  60 184
LQ332_RS17805 3876703 .. 3876713 +  -6.8  -2.89475   GAGTCTGGTTTCAGA                 CGCT GTG AGCG                 TATGGTGTCTCACTC  49 88
LQ332_RS17820 3879636 .. 3879648 +  -6.2  -5.23316   ATTCACTTTCGGCGA                CGGC CAGCT GCCG                TTTTTTCCTCTGGTG  93 175
LQ332_RS17830 3882323 .. 3882345 +  -2.7  -3.86897   TCGGCGCGGCGCGAT           TCGATGTTG CTGAC CGAGATCGA           TTTCTCCGACATGCG  56 392
LQ332_RS17875 3887683 .. 3887723 +  -2.5  -4.56775   TTCACGGGCAATCGA CCGGTTGCCGCAGT-GCCC AGGTC GTGCGAATGCGGTG-CCGG TTTTTCAGCGCGAAT  67 45
LQ332_RS17880 3888386 .. 3888405 + -12.8  -4.44608   GAGCGATGTGTGGTG            GGCCTGCG GCGA CGCGGGCC             TTCTTTTTGAGTCCA  95 39
LQ332_RS17885 3889399 .. 3889413 +  -5.6  -3.75332   CCTCGAACAGGTCGG               CAGGCG ATG CGCGTG               TTTCCGTTGCAGGGT  58 459
LQ332_RS17905 NONE
        msuE 3894731 .. 3894767 +  -2.7  -3.45817   TGGCGCCGCCGACGC    CGCTGCGGCGCATTGCC TGA GGCCATAACCGGCGGCG    CTTTTCTTATGGCGA  47 6
LQ332_RS17915 NONE
LQ332_RS17920 NONE
LQ332_RS17925 NONE
LQ332_RS17930 NONE
LQ332_RS17935 NONE
LQ332_RS21210 NONE
LQ332_RS17950 3902135 .. 3902160 +  -4.5  -4.36914   AACGCTGCAATGACA         CCGGGCGTGGC CCGG GCGACCCCCGC          TTTTGTAGAGCCAAG  69 28
LQ332_RS17960 3906637 .. 3906649 +  -3.3  -4.09685   GATCATCGTCAGGTC                GAACG GGC CGTAC                TTTTCGCCGATCGCC  60 341
LQ332_RS17970 3908215 .. 3908232 +  -4.8  -3.14211   GCCGACATCCACGCC             CAGCGC GCGCAG GTGCTG              TTCCTGCGCCAGGGT  47 100
LQ332_RS17980 3911277 .. 3911296 +  -2.8  -3.14602   TCTCCAATCTTCAAA            ATGGACGA ACGT TCGTTCAC             TATTCGTGGCATGAG  43 93
LQ332_RS17985 NONE
LQ332_RS17990 3912905 .. 3912931 +  -3.7  -3.72576   GGGCCACTGGAAGCG        GTGAT-G-CGGCG CGT CGCCGGCTAGCAC        TTTGGTCGCGCAGGC  56 2
LQ332_RS17995 3914091 .. 3914105 +    -7  -3.76373   TGTTAGTCGACTACC               GCGCGC AGC GCGGGC               TTTGCCTGTTCCAGA  62 81
LQ332_RS18035 3921241 .. 3921251 +  -5.4  -3.75024   CCTCAGGGGCGAGGT                 GTAC GTA GTAC                 TTCTTCGTCGTGGCG  58 167
LQ332_RS18045 3923122 .. 3923138 +  -7.9  -2.54896   TGCCTGCGGCTGGTC              GCGGGCG ACG TGCTCGC              TGAGTTCGATGCCGG  48 187
LQ332_RS18060 NONE
LQ332_RS18065 NONE
LQ332_RS18070 NONE
LQ332_RS18075 NONE
LQ332_RS18080 3931039 .. 3931059 +  -9.6  -3.01712   GGCACAGCACACGCA            GCCGGGCC GGATG GGCCAGGC            TCTTGAGCAGGGCGG  59 262
LQ332_RS18090 NONE
LQ332_RS18095 3932050 .. 3932066 +  -6.5  -3.12606   TCTGGCTGCACGATC              GCCTCCT TCG ATGAGGC              TTCACTGCTGTGTCA  51 12
LQ332_RS18100 3933277 .. 3933293 +  -4.4  -3.04144   CCGGCACGCGCACAC             TCGGCGC ATGG GCGC-GA              TCTTCCACCTGCGGC  44 119
LQ332_RS18105 3934076 .. 3934098 +  -3.3  -3.31726   CAAGAGCGCCCGCTG           TGCAACGCA TACAC TGCGTGGCC           TGTTCTCTCCCCCGA  47 122
LQ332_RS18110 3935081 .. 3935102 + -12.3  -3.41878   GCTGAATCCGGTCGA           CAAGCGTGC TGAT GCGCGCTTG            TTCTCAGTTGCAACC  73 36
        thrA 3937928 .. 3937939 +  -2.2  -2.52896   GTGAAGGAGCACGCC                TGTG ATTG CACG                 TGCGTTCGCGCCTGC  38 21
LQ332_RS18120 3938822 .. 3938835 +  -9.5   -2.8194   GTCGCCGCTGGATGC               GCCGG GAGC CCGGC                TGTGCTGAATCCTTC  58 4
        thrC 3940537 .. 3940588 + -12.3  -3.32022   GTCCAGTTCCTGGCA GGCGC-GCTGCAGCAGCTT-GCGCTC CAG GTGCGGGAAGCGGCTGC-GCAGCGCC TTCATCTGTGGCAGC  70 403
        hisS NONE
LQ332_RS18140 3942821 .. 3942854 + -18.9  -3.53012   GATTGTTGATTTGAA     AGCAGAACGCCCGCC CTTT GGTGGGCGTTCTGCG      TTTGCGGGCGAAGCG 100 49
LQ332_RS18145 NONE
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE NONE
LQ332_RS18190 NONE
LQ332_RS18195 3952711 .. 3952738 +  -9.8  -3.07816   TCGCGCTAGGCAAAG        TGGCCCCGATGC CTGA GAATCGGGGCGA         TTCAATCGATCCAAG  60 58
LQ332_RS18200 NONE
LQ332_RS18205 NONE
LQ332_RS18210 3955690 .. 3955703 +  -2.3  -3.70902   CCAAACAGCGGAACG               CAGGG GCAT CCATG                TTTCCGTGTAGACGA  53 152
LQ332_RS18215 3956445 .. 3956474 + -14.3   -2.9175   GTTAACGGCATTCCC       CCGGGCATTGCTGC ATC GCCGCA-TGCCCGG       TGTGGTTCAGCTGTG  75 151
LQ332_RS18220 3959677 .. 3959695 +  -7.4  -3.63627   ACAGGCTGGATTTGA             CCTTCCCA CGA TGGCAAGG             TTTAGCCTGTCCGCA  63 129
LQ332_RS18225 NONE
        cueR 3962730 .. 3962759 + -18.6  -3.45945   CGCATGCATTGAAAA       GCCCGCCCTGTG ACAGTG CACGGGGCGGGC        TTCGTTGTGGATGCC  93 52
LQ332_RS18245 NONE
LQ332_RS18250 NONE
        fucP 3972379 .. 3972393 +  -2.8  -2.90075   GGGAGGCTGAGTCCG               GAATGG GTG CCATTG               TCTGCTTCGGCGAAA  41 31
LQ332_RS18260 NONE
LQ332_RS18265 3974575 .. 3974591 +  -2.2  -2.53382   CATGGGTGCGTGCTA              CGAAGT GTTGA ACGTCG              TGCGTTGAAGATCGT  38 1
LQ332_RS18270 3977336 .. 3977367 + -17.4  -3.16881   GACGAAGGGGATTAA      GTCGTTTGTGGCCC ATGT GTGCCACAAACGAC       TTAATCCCCTCCGTC  88 52
LQ332_RS18300 3983667 .. 3983722 + -30.8  -4.68593   TGGCACGTTGAAAAA AGGGACGGAGGGGATTAAGTCGTTAA TGCA TAAACGACTTAATCCCCTCCGTCCCC TTTTTACCTAGTACA 100 30
LQ332_RS18310 NONE
LQ332_RS18315 3986899 .. 3986937 +  -3.9  -2.87132   CGCGTTGATCCGGCC  T-TCGGGTAGT-GCCGGCC GCT GGTCGGCAACTGCATGACA  TCTGTACGGAACGCC  43 33
LQ332_RS18320 3989156 .. 3989180 +  -6.4  -3.28924   CACCACGTCGGTGCG          TGCGCGGC GTACATCCA GCCGTGCA          TTGTCGGACAGGCTC  52 453
LQ332_RS18335 NONE
LQ332_RS18340 NONE
LQ332_RS18345 3995317 .. 3995349 +  -3.4  -3.54741   CGGTTGTTGTCGATG     GCGGTGTTGGCCG CGTGAGTA CGGTCAG-GCCGC      TTTCAGGCCCTGCTC  49 8
LQ332_RS18350 3996236 .. 3996263 + -10.4  -3.01712   GAAGGTGCTTAGTCG        GCGCGGCCGGCG AATT CGCCGGTGGCGG         TGTTCACCAGCACGC  62 151
LQ332_RS18380 4000155 .. 4000179 +  -2.7  -3.19463   CGTGGTCGACGCCGT          CAGTCAGGAAC GCC GTGCATGACCG          TTACTGCCTCCTCCG  44 4
LQ332_RS18385 NONE
LQ332_RS18390 4002529 .. 4002548 +  -4.8  -4.20516   ATCCTGCTGGATGAA            GGCCCGGC GCAG GCCCGGCG             TTTCTTCGATCCGCC  66 271
        dapB 4003747 .. 4003773 +  -9.5  -3.17075   CTGCTGGCGTAAGGC        GGTAGTGCCGGCC GCT GGCCGGCA--ACC        TTGGGTTACGGGGCG  60 29
        carA NONE
        carB NONE
        greA 4009046 .. 4009086 + -11.1  -2.71712   GCTACGTGGACTGAC CGGGTG-GCGACGGCGAC CCTGCT GTTGCCGGCGCGCAGCCG  CTTTGCCGCGGCGGC  62 27
LQ332_RS18420 4009984 .. 4010026 + -13.4  -2.60992   GGGGCCTCGGCCGAG CGGGATCGGATCCGTTTGCC ATC GGAAAATGGCTCTGACCCCG ATGTTTCCCGGGGTT  67 43
        recJ NONE
LQ332_RS18435 4016205 .. 4016263 +    -4  -2.70932   ATGGCGGCCATCGCC CGGTCCG-G-AGGCTGCG-GCGG-TG-GA CCACGC TCGCGCCCGCCCGCAGCCTGCCCGGGCCC TCATTCCGGGCACCC  42 151
LQ332_RS18440 NONE
        prfB NONE
LQ332_RS18450 4018512 .. 4018533 +  -8.7  -2.90763   GCGCGGCTGTTGGTG           GGTGTCGAC GTTG GTCGACACA            TCTGTCAGATATCGA  55 255
LQ332_RS18455 NONE
LQ332_RS18460 4022023 .. 4022059 + -20.3  -3.30124   GCAGGGTCCCGGACG    GGGTCGGATGCCTTTGC GCA GCAAAGGGATCTGACCC    TTCTCCCGGCTGGGG 100 56
        lysS 4023802 .. 4023821 +  -2.1  -3.41051   AGGGGGAGGGCACGG            TGTGGGG AGTCCG CTTCACA             TTGTGATGACGATCA  45 163
LQ332_RS18470 NONE
LQ332_RS18475 4027455 .. 4027466 +  -2.2  -3.61398   CGGCGTGCGCTGCTG                CTGG CGGA TCAG                 TTCTTCCACCGCCGC  50 291
LQ332_RS18505 4035857 .. 4035882 + -20.5  -4.93547   CATCGCAAACGGAAA         GGGCCGGATCC GTGC GGATCCGGCCC          TTTTTCGTTACTTGC 100 84
LQ332_RS18515 NONE
LQ332_RS18520 NONE
        acnB 4042257 .. 4042276 + -12.8  -4.95547   CGTTGAAATGAAAAA            CCCCCGGT GAGA GCCGGGGG             TTTTCTTGTTGTGCA 100 71
LQ332_RS18530 4042776 .. 4042790 +  -7.8  -3.72893   CCTGGGGCGAGCGGC               GCTGCT ACT GGCAGC               TTTGATACCCGCCTG  65 60
LQ332_RS18535 4043587 .. 4043617 +  -9.7  -3.53012   CTGGTCGTTTCGTCC      TGCACCAGCGTCGG CGCG CCGGC-CTGGCGCA       TTTCCAGCAGGCCGC  65 375
LQ332_RS18575 4053884 .. 4053896 + -10.5  -2.53876   CCGGGCCTCAGAGCT                CGCCG TTG CGGCG                TGCCTTGCGCTGGCG  58 304
        flgA 4113359 .. 4113372 +  -9.5  -3.45054   TATCCCTAAAGATCA               CGGCC CTGC GGCCG                TTATCCCTTGTGAAC  65 53
        flgM NONE
LQ332_RS18875 4114089 .. 4114103 +  -2.7  -3.07013   CTGCGGGCTGAACCC               CGCTG CATGA CCGCG               TATATTGGGCGCCTG  42 67
LQ332_RS18880 4115367 .. 4115393 +  -9.5  -2.70932   GCGCTGACCGCTTCC        GGTCGTGCCGGCC GCT GGCCGGCA--ACC        TCATTGAACCGGACA  56 34
LQ332_RS18895 4123131 .. 4123144 +  -5.9  -3.06796   CCGTCACCCGCACCT               CGTGC CGTC GCGCG                TTGAGTACGATGCGA  48 355
        clpS 4128682 .. 4128724 +  -5.6  -2.97825   CCGCGCGCACCAAAA TCCAGCACGTTGTCATGGTG CAGGT CGCCGTG-CAGCG-GCCGGA TCTCCTGTTCTTCCT  46 415
        clpA 4131645 .. 4131668 + -18.2  -3.41229   ACGGACCTGACATGA          CAAGGGCGGC TTCG GCCGCCCTTG           TTGTGCTGGGCCTGT  93 62
LQ332_RS18950 NONE
LQ332_RS18955 4132373 .. 4132396 + -18.2  -3.29144   GACAACCCTTCCTGA          CAAGGGCGGC TTCG GCCGCCCTTG           TTGTACGCGACGTCA  93 39
LQ332_RS18980 4136940 .. 4136961 + -18.7  -3.84825   TCCTGAAAGCACGAA           GGCCGGCGC TTTC GCGCCGGCC            TTTGGTCTCGGTCGA  95 61
LQ332_RS18990 NONE
LQ332_RS18995 4142674 .. 4142689 +  -4.6  -2.74144   ATCCAACTTTCCTGG              CCTGCG TGCC CACAGG               ATTTCCGCATGAACG  44 152
        lolA 4143404 .. 4143432 + -14.5  -2.58544   TGGCTGGCACGCTTG        GGATCTGCCGGCC AGC GGCCGGCTCATCC        GTTGTCCGGATGAAC  74 93
LQ332_RS19010 4146206 .. 4146234 + -11.7  -3.61398   CGTTGAGCCGGCTTA        TGTGGGGTCGAGC CAT GCTCGACGCTGCA        TTGTTCCCGCCGCCG  74 35
LQ332_RS19015 4146706 .. 4146736 + -13.3  -3.41693   CGCTACAGGGCAGCA       GAATGAAGCCGGC ATTTC GCCGGCTTCGTCC       TTACTTGATGGTGCA  77 67
LQ332_RS19025 NONE
LQ332_RS19030 NONE
LQ332_RS19035 NONE
LQ332_RS19040 4152105 .. 4152132 +    -4  -3.31144   GCTGGTGCTGCAGCA        GCGC-CGCAAGGC GGC GCCATGAGCGTGC        TTCTGAAACTGCACG  49 4
LQ332_RS19045 4152896 .. 4152908 +  -4.7  -2.85351   ATAGGCCGGATCTGC                CGCCG TCG CCGCG                TATCATGTCCGGCCG  45 37
LQ332_RS19050 4153937 .. 4153967 + -11.9  -5.01845   CCATCGCTGGACCTT      CGA-CAGAGCGCCC TCCG GGGCGCTCTTTTCG       TTTTTGATTCTTGTA 100 265
        fusA 4156204 .. 4156225 + -17.3  -5.38047   CATGAGGAAAGTGAG           GGGAGCCCG TTCG CGGGCTCCC            TTTTTTCTGTGCGTC 100 36
LQ332_RS19060 4156772 .. 4156795 +    -3  -3.75024   TGAAATAGTTTGCCG          GCGGGGTGGC CGTT GTCATCGTGC           TTGTTGATAATGCGG  54 33
LQ332_RS19065 4157817 .. 4157859 +  -6.9  -3.68302   GCGATGTGCGTGGTG GCCCAGCGAAGGCGCGTCGGC GCG GCCGATG-GCCTGCGC-GATC TTCTTCAGCTCTTCG  61 212
LQ332_RS19125 NONE
LQ332_RS19130 NONE
LQ332_RS19135 4171438 .. 4171448 +  -2.4  -2.70932   AATCGATCAGCACGT                 GGCC GCC GGAC                 TGCTTGACGAAGCCG  39 525
LQ332_RS19155 4177066 .. 4177076 +  -8.2  -2.93367   CCCCCCATCCCAGAA                 GGCC ATA GGCC                 TGTGTGCGCTTGTTC  53 500
LQ332_RS19170 4180100 .. 4180119 +   -10  -3.53444   GGCCCTGCGCGACAC            G-CGCTGGC AGC GCCAGCGAC            TTTCGAAGGGGGTGA  69 152
LQ332_RS19175 NONE
LQ332_RS19180 4183531 .. 4183548 +  -6.9  -4.81249   TCTCGGCACCGCTAA             CCGCCTG AATT TGGGCGG              TTTTTGCGTTTGCGA  82 453
LQ332_RS19190 NONE
LQ332_RS19195 4184478 .. 4184492 +  -3.5  -3.13164   GAAGAACAGGAGCGC              GCC-GC ATGA GCAGGC               TTCCCTCATTCGCCG  43 17
LQ332_RS19200 NONE
LQ332_RS19205 NONE
LQ332_RS19210 NONE
LQ332_RS19215 NONE
LQ332_RS19220 4186461 .. 4186486 + -16.1  -4.72272   AGTCGGAACAGGGCA         GGGGGCGCACG GCGA CGTTCGCCCCC          TTTTTCATGGGAGAA 100 45
LQ332_RS19225 NONE
LQ332_RS19230 NONE
LQ332_RS19235 NONE
LQ332_RS19240 4190151 .. 4190163 +  -3.3  -4.08767   CGTCGTCCATCGATG                CAGCG CTC CCCTG                TTTTGAGCGGCTCCC  60 92
        merT NONE
        merP NONE
        merA NONE
        merE 4198898 .. 4198917 +  -4.2  -3.78775   AGTATCTCGAAATCG            AGCTGACCG AAT CGGTC-GCG            TTTGGTGATCCGGCG  56 416
LQ332_RS19290 4199520 .. 4199531 +  -2.2  -3.15544   ACTGGATGTCAGGCA                G-GGC CGC GCCGC                TTAGTCAGAATAGAG  42 52
LQ332_RS19295 NONE
LQ332_RS19300 4203271 .. 4203295 +  -5.8  -3.53012   CGCAGCAAGCACTAC         GTTG-TGCTGA GGGA TCAGCAGCAGC          TTTGCCCCCGCGGAA  55 97
LQ332_RS19310 4203796 .. 4203809 +  -2.3  -4.09685   TCTTAGGGTGCCATT               GCAGA GATT TCAGC                TTTTGAGGAATAAAA  58 103
LQ332_RS19315 4205764 .. 4205777 +  -2.4  -4.80882   GCAAGGTTCTTAGCT               TTCG AGGCAG CGAA                TTTTTGATGTGCCCT  74 430
LQ332_RS19345 4210862 .. 4210895 +  -7.3  -2.82635   GCCCTGATCTGCCCA     GCGTCCGCAGGCGCTG CTT CGG-GCGTGCGGGAGC     TGTCATGGTGAGGCT  52 125
LQ332_RS19350 4211317 .. 4211347 +  -5.3  -3.60151   TCCTGGATTGACCCG       TGCTCGTGCTGCA TGCGT TGCAGCGCGCTCG       TTGTCGTTTCCCGGA  55 47
LQ332_RS19355 NONE
LQ332_RS21220 NONE
LQ332_RS19370 4217495 .. 4217511 +    -3  -2.95521   AAAATCCAAACCCTT              TTGTGT AGAGG GCACAA              TGTGATTGGTGTGGA  40 199
LQ332_RS19385 4219308 .. 4219320 +  -6.9  -3.20367   TCATCAACAACAGGC                GGCCG TAA TGGCC                TTGATGCCCTTGTTG  50 486
LQ332_RS19455 4231089 .. 4231103 +  -3.4  -4.63486   CTCCCCCATCTTGCG               CATGGC CGC GCCGAG               TTTTCTTCACCGCAT  72 69
LQ332_RS19465 NONE
LQ332_RS19470 4235262 .. 4235279 +  -2.5  -3.53224   CTCACCGGCGACCAG             GCGCAGG TCGT CCACCGC              TTTCACGCCCGGGTC  47 239
LQ332_RS19510 NONE
LQ332_RS19515 NONE
LQ332_RS19520 4248906 .. 4248916 +  -5.4  -3.41913   TGTCAATGAAGAAGA                 CAGA ATA TCTG                 GTTTTTAGATATCGG  51 372
LQ332_RS19530 4249397 .. 4249408 +  -5.8  -2.64616   TTTTGTGGAACCGTG                GGGT CTGA ACCC                 TCGTGTAGATCCGGG  45 201
LQ332_RS19540 4251998 .. 4252019 +  -4.3  -3.08798   AGCCCTCCTCCCGCT           GAATCGAGG CAGG CCTCGAAGC            TGTTGGGTCAACCAT  45 24
LQ332_RS19545 4252429 .. 4252457 +  -2.3  -3.32844   GAGGGTCATCCGGCC        GAAGTGCAAGTAG ACC CACCTCGTACTTC        TTCTCCAGTACCGCC  45 13
LQ332_RS19550 NONE
LQ332_RS19555 4254178 .. 4254192 +  -2.7  -2.81702   GTCAACGTCCTAAGC               CGGAG TAAAT CCCCG               TGCTTGCTCCTCTTG  40 28
LQ332_RS19560 NONE
LQ332_RS19570 NONE
LQ332_RS19575 4257155 .. 4257165 +  -4.6  -3.22298   AGTTCGAGCAGGGCA                 TCCG GCC CGGG                 TTAGTCGTCCATCCC  49 274
LQ332_RS19595 4261705 .. 4261721 +    -5  -2.78384   CAGTGCGCGTTGAAT              GTGCCC CGCTC GGGCCC              TATCCTGCACAAGAC  44 62
LQ332_RS19600 4263958 .. 4263999 +   -10  -2.74012   CCACCCTGCCGGTTC CAGCGGAACGCCTCCCAC ATCAGA GTCGGCGGCGTTCCACCG  TACTTCAACTCATCA  56 249
LQ332_RS19615 4267222 .. 4267246 + -17.2  -3.21218   GGAGCTGCTGCAGCG          CGTGGCACCG GACTA CGGTGCCACG          TTGATCGTAGACCCT  91 54
LQ332_RS19620 4268787 .. 4268801 +   -10  -3.59979   GCCGGACGTACTCTT               CTGCGA GCG TCGCAG               TTTGCCCTGAGAGGC  71 275
LQ332_RS19625 4270033 .. 4270048 +  -3.2  -3.04144   GGCTGCTGCCTGCGT              CG-CCTG GGA CGGGACG              TGTTCCGCATGGGCA  42 365
LQ332_RS19630 4270869 .. 4270908 + -11.4  -3.02144   CATCTCCGAACCCTG  GAAATGACTTGCCCCCGT TGGC GCGGGGGCAAGTGACATC   TGTTGGAGCAGATGG  65 157
LQ332_RS19635 NONE
LQ332_RS19640 NONE
LQ332_RS19645 4275181 .. 4275191 +  -6.8  -4.09685   GCATGCGGAAGGACG                 CTGG GCA CCAG                 TTTTGACCACTCCGG  68 465
LQ332_RS19650 4276127 .. 4276141 +  -2.8  -2.70932   AAGGCAGGCAGTTCT               TAGCAA TTT TTGCCA               TCATTGGGGCAACGG  40 39
LQ332_RS19675 4281728 .. 4281749 +   -13  -2.57132   CGAACCACGCACCGT           CCGCCACC TTTATC GGTGGCGG            CTTCTGCACGCGCGC  67 433
LQ332_RS19680 4282129 .. 4282171 +  -9.1  -3.45737   CGACTGCATCCGGAG GGCTGAGTGGCGTGGTGCCGC TGG GCGGC-CAACGC-GCTCTGTC TTGTGGTGGTGGTTG  65 20
LQ332_RS19685 4283040 .. 4283082 +  -4.9  -2.52464   AGTGGTGGTTGGCTA CCGG-AGTGGCATCCAAC CCGGCAAT GCTGGATGTCACTGCCTG TGCGTTCGCGCCCAC  42 460
LQ332_RS19715 4288694 .. 4288706 + -10.5  -2.50492   ATCGTATAGCCGCTC                CGGCC GCA GGCCG                ATGTTCATGCTGATC  55 109
LQ332_RS19740 4293417 .. 4293438 +  -5.7  -3.68222   TCCTACTGCAGCTTG           CGCTGCGGC TTCC GCTGCGGCC            TTCTTGAGATTCAGC  57 329
LQ332_RS19750 NONE
LQ332_RS19755 4296000 .. 4296039 + -10.1  -3.34192   GATGGGGCGCGATGT CG-CCC-GCAGTAGCCGAGC GTG GCTCGGCT-CTACAGGGACG TTGGTTGCGAGGGTT  67 14
LQ332_RS19775 4299075 .. 4299105 +   -19  -3.08679   AGGAAAAGTGACTGG       CGAGGGCTCCGGCG CCG TGCCGGAGCCCTCC       TGTTGCCTGGCGCCC  93 30
LQ332_RS19800 4306589 .. 4306616 + -10.4  -2.72096   GAAGTTTCAGCGGCA        GCCCCTGCCCCG CGGC CGGCGCGGGTGC         CTTGTGGTTGCTGGC  59 324
LQ332_RS19815 NONE
LQ332_RS19820 4314033 .. 4314067 +    -4  -2.53876   CCGCTGCGCGCAGCA     GCCCGGTCCTGCGCCT GAA ACGCGAGGGGACGGCC     TCGGTTGCCGTCCCC  41 48
LQ332_RS19865 4323126 .. 4323172 + -12.2  -3.14344   ACCAGCCGCTGCAAC TGCACCAGCAGCCTGTCTGCGT CCA ACGCATGCAGGCCGGTGGTGGG TTCGTCCAGCACATA  68 293
LQ332_RS19875 NONE
LQ332_RS19880 4326822 .. 4326839 +  -6.9  -3.14132   CGATCGCCCACCATG             TGCCGCG CGAC CGTGGCG              TTGGTGCGGGCCCAG  50 336
LQ332_RS19890 4328875 .. 4328911 +  -7.2  -3.20164   CCAGTTTGCCGCTGC   GCAGGCCCA-ACG-GGTC ACC GGCCACGGCTGGGCCCGC   TTCACTTACGTATGC  53 414
LQ332_RS19910 4332658 .. 4332675 +  -6.3  -3.96148   AACGTGCGCCGCCGC             GTTGTAC CCAT GTACAGC              TTTCTGATCGGGCCA  66 117
LQ332_RS19930 4335217 .. 4335241 + -20.1  -5.40072   CCGGTTGCACCCCAA          GTGGGCGGACA GCG TGTCCGCCCAC          TTTTTTTGCGAGGCG 100 51
LQ332_RS19950 NONE
LQ332_RS19995 NONE
LQ332_RS20000 NONE
LQ332_RS20005 4345336 .. 4345367 +  -8.7  -2.54896   GCGGCTGACAGCTGC     GCCGG-GCA-CGGCC GGCC GGACGCTGCACCGGC      TCACTTCGCTGCCGG  53 33
LQ332_RS20050 4359254 .. 4359272 +  -2.3  -2.71712   AGCGCATCCAGCTTC            GCACCGGC CGCG GCCAG-GC             ATTTCAGCGGAACAC  39 223
LQ332_RS20100 4375753 .. 4375785 + -14.9  -3.12668   GCGCCCGTCGCGGAC     CGCCGCTGTCACGG AACGTG CCG-GGCAGCGGCG      TTCGCTGTACCGGTC  80 418
LQ332_RS20110 4377205 .. 4377219 +  -3.4  -3.04792   CCCGGCGCTAGAAGG               CCAGCT GCA GGCGGG               TGTTGAACGTCGTGC  43 58
LQ332_RS20140 NONE
LQ332_RS20160 4386167 .. 4386196 +  -8.6  -3.59979   GGTGACGACCAAAGG       TGCCATGCCA-CG TGCTT CGATGGCCTGGCA       TTTACCCTCCAGCGC  63 401
        msuE NONE
LQ332_RS20180 4389262 .. 4389288 +  -7.2  -2.66326   CCTACCGCGCCGTGC         TTGAGCAGTGGG CTG CCCGCTGATCCA         TCGATTTCCCATTCG  48 3
LQ332_RS20185 4390426 .. 4390458 +  -7.6  -3.40867   CTGCACGTCGGGCCT     G-GCCAGCGCCGCAGG CCG CC-GCGGCGCCAGCGC     TTGCTTGATCCGTGC  58 96
LQ332_RS20205 NONE
LQ332_RS20210 NONE
LQ332_RS20215 NONE
LQ332_RS20220 NONE
LQ332_RS20225 4400822 .. 4400841 +  -2.8  -3.00572   ACCTGACCGGACTCC            TGCCCATGC AGC GC-TGGACA            CTTCTGTTTTCATTG  42 42
LQ332_RS20230 4402023 .. 4402037 +  -3.5  -4.46514   CGAGTGAGAGAGAAC               CGATG AGCCG CGTCG               TTTGTTTCGGTGAGT  69 34
LQ332_RS20235 4403442 .. 4403461 +    -2  -3.35679   TGCCATTGCCGAGCG            TGACCTGG ACGG CCGGGGTA             TTGTCGATCCAGCGC  45 423
LQ332_RS20250 NONE
LQ332_RS20260 4409111 .. 4409139 + -13.9  -3.54741   CTGAGGCGGCCTCAG       C-CCGCAGCGCC CAGTGC GGCGCTGCGGCG        TTTCCCGGCGTAATG  81 37
LQ332_RS20285 NONE
LQ332_RS20290 4413160 .. 4413171 +  -5.8  -2.68532   ACCGGATGTCGCGAC                CCTG AAGG CAGG                 TGGTGTCGATTTCCC  46 21
LQ332_RS20295 NONE
LQ332_RS20300 4414542 .. 4414553 +  -3.6  -3.09492   CTGCGGAACCGCCCT                TGCG CCAC CGCG                 TGTTCCAGTTCGACG  43 498
LQ332_RS20310 NONE
LQ332_RS20315 NONE
LQ332_RS20320 4418348 .. 4418360 +  -4.7  -3.21595   CCAACGGCCGGGTCC                CCGGG AGC CCCTG                TTCCTCCTCCCCCTT  49 62
LQ332_RS20325 NONE
LQ332_RS20330 NONE
LQ332_RS20335 4421218 .. 4421271 +  -7.7  -3.16742   CTGTAGCGGCGAGGC GTCG-TG-GCATGAT-GGCGTCC-CTG CCGC CAGTGGACGCCCATCATGCCCATCGGA TTCATCGGCCTTGGC  55 35
LQ332_RS20340 4422204 .. 4422224 + -11.1  -3.05384   ATATTCAGTCCAGTT            CGGCAGGCA TGG TGCCTGCCC            TTGAATCACAGGGAG  66 85
LQ332_RS20345 NONE
LQ332_RS20350 NONE
LQ332_RS20355 4425040 .. 4425058 +   -16  -3.44289   CCTGGCTGCGGGGCG             TGCCGGCC GCT GGCCGGCA             TTCCTTCGGTTTCTG  90 53
LQ332_RS20360 NONE
LQ332_RS20365 4426886 .. 4426897 +  -2.2  -2.71364   CCTGAACCTGCCGCT                G-CCG TGC CGGAC                TGGTTGCCCGCCTCC  38 95
LQ332_RS20370 NONE
LQ332_RS20375 NONE
LQ332_RS20380 4429578 .. 4429599 + -10.8  -4.25283   GCGCACCGTCACCCA           GGCCGGCG CATGAT CGCTGGCC            TTTTCCTGCAGGCGT  86 47
LQ332_RS20390 4432578 .. 4432598 +    -9  -3.55444   GGCAGCGGCAGTGCT           GGC-CGGCT GTAC AGCCGCGCC            TTTCGGACCTGGAAG  63 509
LQ332_RS20400 NONE
LQ332_RS20405 NONE
LQ332_RS20410 4435072 .. 4435089 +  -8.3  -3.14132   CTGAGCAGCGGCAGC             GCCGAGC GCAT GCCCGGC              TTGCTGCGCGCAGCG  57 37
LQ332_RS20425 NONE
LQ332_RS20430 4439861 .. 4439871 +  -2.4  -3.16881   CCACCATCCGTGGCG                 TCGG CTA CCGC                 TTCCTGGACTGAATG  42 3
LQ332_RS20435 4441254 .. 4441280 +  -6.5  -4.25104   AGGCGCACCTGTTCG        TCCG-GCGCGTG GCGG CGCGAGCGCGGA         TTTTCGTCCGCCGGC  72 340
         pip 4444913 .. 4444927 +   -10  -3.33696   CGGCAGGTGCTCGAC               GGCGAT GCC ATCGCC               TTCGTTCAACACCGC  63 221
LQ332_RS20480 4451780 .. 4451814 +  -5.4    -2.836   GACGCAGATGGACCC     CGACCCTGCCGGGCGC GCC GCGCCCCGGATGACCG     CTTGTTGCCTGTTCC  45 193
LQ332_RS20485 4452181 .. 4452202 +  -8.7  -2.64616   GCCGTGGTCGCCGGC           GGTGCTGGCG ATG CGCCA-CGCC           TGATCTGCCTCACCC  53 1
        mgtA 4455017 .. 4455041 +  -6.3  -3.28712   TACATCCGTCGTTAC          GGCTGGCAG TAGGCGC CCGCCGGCC          TTGTCCAGGGAGAAA  51 14
LQ332_RS20495 4456025 .. 4456046 +  -7.9  -3.91087   CGGCCGGCACTACCG           GTCGCCATC TACC GAGGGCGGC            TTTGCTATCCTTTCA  67 250
LQ332_RS20500 NONE
LQ332_RS20505 4457953 .. 4457996 +  -9.5  -3.05596   AGCCCGGTGTGCTGC AGGGTGA-AGCCGCCCTGGC GCCCG GCCAGCGTGGCCGTCACCCG TTCCATCGCCACGTA  59 204
LQ332_RS20520 NONE
LQ332_RS20525 NONE
LQ332_RS20530 4463265 .. 4463287 + -16.2  -3.28924   GCAGGTGCGAGCGCG           GCGCGCGGCC GTA GACCGCGCGC           TTGTAGAGGGCACTG  82 183
       blaL1 4465830 .. 4465870 + -13.2  -2.70932   TCCATACCCGGCGAG CCGGCCGGCATGCCGGGCAG CAC CAGCCCG-CGCGCC-GCCGG TCGTTCGGCCAGCAG  67 226
        fdhD 4470358 .. 4470399 +  -5.7  -2.81464   ATCCCAGTGCAGCGG CGGTCGCCGGGT-CACTGGA CTG TCCGGTCTGCGCGGCGGCCA TCTGCTCACTGCTGG  46 265
LQ332_RS20570 4471713 .. 4471731 +  -6.6  -4.26903   CTACCGCTGGTCGAC             TATCGCGC GAC GCGCGGAA             TTTTCCTGGCCTGAC  72 59
LQ332_RS20615 4479057 .. 4479093 +  -4.1  -2.52464   CAACAGCTGATACGC    AGTCGGTAGTGCCGGCC GCT GGCCGGCAACCCCGGGG    TCCCTTCAGCCGGCC  41 61
        dkgB 4481416 .. 4481429 +  -3.1  -2.52543   CTGGGACTGAGGAGC               CTCGCC ATG GGC-AG               TGCGTTGGCGCGGCT  39 31
LQ332_RS20630 NONE
LQ332_RS20635 NONE
LQ332_RS20640 4483702 .. 4483734 + -11.1  -2.78384   GCTTCGCGTGCTGCT      TCGGTAGTGCCGGCC GCT GGCCGGCAACCCCGG      TCTGCTCGAACACCC  59 80
LQ332_RS20650 4485753 .. 4485810 +  -2.6  -3.31461   TCGCCATCGGCAGCA GGC-CG-AACATCGCCAGCAGCGCGGT CATCAGC ACCGTGC-GCAGGCGCTGCAGCGAGCC TTGTACCACTGACTG  45 308
LQ332_RS20670 NONE
LQ332_RS20675 4493497 .. 4493523 +  -9.4  -2.78384   GCAGACGCATCGCGG         TCCTGGGCAG GAACGGA CGGCCCAGGA         TGTACTCGCCCGAGC  52 331
LQ332_RS20685 4496476 .. 4496488 +  -3.3  -4.27316   CATGCAGCAGCACCA                CGGTG GGC CACAG                TTTTACCTTGAACGC  67 180
LQ332_RS20700 4497533 .. 4497547 + -12.8  -2.53876   CCCGTCGCTGCGTTT               CCGCCG TTG CGGCGG               TGCGTTGCCGTGCGC  67 114
        proP 4499429 .. 4499455 + -12.3  -3.41051   GGCAGCGGCACCACG        CAGC-CGTCGGC ATCG GCCGGCGCGCTG         TTGTCGTAGACATGC  73 260
LQ332_RS20760 4511759 .. 4511800 + -15.7  -2.71924   TGATCGTTTCAACGC GGCGGACGATGGCCCGCCG CATC CTCCGGGCCATCGCCCACC  CTTTCCAGGAGACTG  78 38
LQ332_RS20765 NONE
LQ332_RS20770 4512970 .. 4512986 + -12.3  -2.85351   TGCAGCGTAACCCCA              TCCACGC ATG GCGTGGA              TCTACTGTGGAGCCA  66 31
LQ332_RS20805 4520484 .. 4520501 +  -6.9  -3.85698   GTCCGTCCAGACGCA             GCCGAGC GTAG GCTGGGC              TTTATGGGGCGGCCG  64 105
        gspH NONE
        gspI NONE
LQ332_RS20825 4522504 .. 4522520 + -12.3  -3.41962   CTTGCCTGCAACGCA              TCCACGC ATG GCGTGGA              TCTTATCTCTTGCCG  73 45
LQ332_RS20830 4523714 .. 4523730 + -12.3  -2.78384   ATGCTGGCCCAGCCA              TCCACGC ATG GCGTGGA              TCTACTGCCGAGCCC  65 94
LQ332_RS20910 NONE
LQ332_RS20915 4552713 .. 4552730 +  -4.8  -2.82015   TCCAGCTGCCCGCCT             CGTCCGG CTCCA CCGG-CG             TCTCATCGGTCTGCA  43 161
LQ332_RS20955 NONE
LQ332_RS20960 4567374 .. 4567394 +  -5.4  -3.72576   ACCGGTCATCCCTGA            CCGGGA CCGCGCGAA TCCCGG            TTTGGTGGAGCCGGC  58 228
LQ332_RS21020 4576547 .. 4576560 +  -4.5  -3.14878   GAAAGAGAATGACCA               TGCCT CGGC GGGCA                TCTTCCCTTCAGAGA  47 162
LQ332_RS21040 4584525 .. 4584546 +  -2.8   -4.1711   GAACCGCAAAGTACC           GCGCCGGG GAAAGG CCAAGCGC            TTTCTTGAACATCGT  61 93
LQ332_RS21050 NONE
LQ332_RS21055 NONE
LQ332_RS21060 NONE
LQ332_RS21065 4589840 .. 4589866 +  -4.3  -3.01712   GGCTGCAGGGGCCAT         CGCCGTTGGTG CGGCC CGCTGACGTCG         TCTTCGCAGCCGCAG  44 4
LQ332_RS21070 4590391 .. 4590419 + -12.3  -2.87132   CCTCGGTGCAGACAC        CTTACGACCGGGG CCG CCCCGGTCGGCGG        TGTCTGCGCCCACGG  66 74
LQ332_RS21080 NONE
LQ332_RS21085 4592404 .. 4592433 +  -4.9  -2.52464   CCGGCCGAGTGAACG       TCGCTGGATGGCGC CGA GCGCCGATT-GCGA       TCCATTCAGCCAGCG  43 29
LQ332_RS21090 NONE
LQ332_RS21095 NONE
LQ332_RS21100 NONE
LQ332_RS21105 4597231 .. 4597256 +    -6  -3.02144   CCACGATCAGGTTCA         GCCGGCCCAG GTAGCG CTCGGCCTGC          TGTTCCAGGAACTGC  48 513
LQ332_RS21115 NONE
LQ332_RS21120 NONE
LQ332_RS21125 NONE
LQ332_RS21130 4601876 .. 4601907 + -11.6  -2.87564   GTGCCGAACATTGAT      TG-GTAGTGCCGGCC GCT GGCCGGCATCACGCA      TCTCTGCGCGGGTCA  64 264
LQ332_RS21170 NONE
LQ332_RS21165 NONE
LQ332_RS21160 NONE
LQ332_RS21155 NONE
LQ332_RS21150 NONE
LQ332_RS21145 NONE
LQ332_RS21140 4602592 .. 4602627 -   -11  -3.44051   CCGGCACTACCAGAA    CCACGG-GTTGCCGGCC AGC GGCCGGCACTACCGGGG    CCATGGTTGCCGGCC  72 98
LQ332_RS21135 4601610 .. 4601620 -  -2.4  -3.63627   CGGTGATACCGCAAA                 GCCG AAA CGGA                 CACGCAAGCCGCGCT  50 438
LQ332_RS21110 4596206 .. 4596230 -  -3.6  -3.44206   CAACACGTATGACAA         CACCCTGGTGCA TAC CG-ACC-GGGTG         CTGGCGGAGACCATC  49 442
LQ332_RS21075 4590159 .. 4590185 -  -5.1  -3.78934   GGGTTGGCAGAAGAA        GGCCTGGCG-TCG TGG CGAGCGCCTG-CC        GTGGGCCGAAGTGGA  58 232
LQ332_RS21045 4584217 .. 4584234 -  -4.1  -2.71791   ACCGGGTGCGGAAAC             CCCGCGCA CGA TGC-CGGA             CTTGCCGGTGGCGCT  40 284
LQ332_RS21035 NONE
LQ332_RS21030 4577829 .. 4577841 -  -7.7  -2.78935   AGATTCCCCATCAGA                GCATC TGG GATGC                GCGAGGACGCTCGCC  52 469
LQ332_RS21025 4576046 .. 4576056 -  -4.6  -2.63723   TCGCCATGAATGAAT                 CGGA CTT CCCG                 CATCTGCACGCCTAC  42 399
        moaA NONE
       moaCB NONE
LQ332_RS21005 NONE
LQ332_RS21000 NONE
LQ332_RS20995 4571370 .. 4571386 - -13.7  -2.79796   GCTCATCGCAGTAGA              GCCACGC CAT GCGTGGC              TGCGCCGGCCGGATT  73 108
LQ332_RS20990 NONE
LQ332_RS20985 4570396 .. 4570445 -  -4.2  -3.16881   GAGGCATTGCAGCAA CGCAGGAACGAA-GGCCCTC-ATC ATAC GACAGCGCGCCATCCGGCCCTGCG CAACCTGCGCCTACT  45 36
LQ332_RS20980 NONE
        modA NONE
        modB NONE
LQ332_RS20965 4567066 .. 4567083 -  -5.5  -3.61398   CCTGTGCGGCAACAA             GCGCC ACCTGGAA GGCGC              GGTACGCGAGGCCAT  54 445
        glgA NONE
LQ332_RS20945 4561032 .. 4561043 -  -2.2  -2.50816   TCGTCATGCATCAAC                CTGC AGGT ACAG                 CGTGGACAGCGGCGG  37 2
        treZ NONE
LQ332_RS20935 NONE
        treY NONE
LQ332_RS20925 NONE
        glgX 4552461 .. 4552482 -  -4.3  -3.14132   TTCGTCGCCGACCAA           CCCGC-CGAC CTG GCCGCGCTGG           CGATCACCCTGCTGG  45 191
LQ332_RS20905 4550582 .. 4550601 - -12.2  -2.71712   CGTGCCGGCCCAAAC            GTGTCGAC CAAG GTCGACAC             CCACCAAGAGCAGCT  65 369
LQ332_RS20900 NONE
LQ332_RS20895 NONE
LQ332_RS20890 4548053 .. 4548066 -  -5.9  -2.75712   TCATCTATCCAAGGA               CGGCG ATGC CACCG                GGAAAGCGACGCAGA  46 1
LQ332_RS20885 4547385 .. 4547403 -  -7.4  -2.53995   AGGCAGGTGAAGCGA             CAGCGC AATTGCA GCGCTG             TACGCTGCGTGGTGT  50 54
LQ332_RS20880 4546698 .. 4546718 -  -7.6  -3.07344   TCATCCTGGAAGAGA           CCGCTGCAC CATG GT-CAGCGG            TGCATGTGTCAGTAC  55 34
        gspG NONE
        gspK NONE
        gspL NONE
        gspM 4543618 .. 4543648 -  -2.5  -3.06796   CGGTAGTGCAGGCAA       GGCTGCGCATC GCCCTCATG GATGGGCACCC       GCAGTAGCCACCATC  42 10
        gspD NONE
        gspE 4539811 .. 4539824 -  -3.1  -3.05844   CCTGGTAGTCGAACA               GTGCCA TGC TGGC-C               TCAATCGTCGCCGGT  43 26
        gspF 4538561 .. 4538573 -  -4.7  -2.52795   AACGGTCTGAATGCA                CTCGG TCG CCGCG                CTGGTCGACTAACAG  43 70
LQ332_RS20840 4536524 .. 4536545 - -17.3  -4.06179   GCGAAAACGCAGAAA           GCGCCGGCA TTGC TGCCGGCGC            CCTTTCATGTTCCAG 100 63
LQ332_RS20835 4523551 .. 4523568 -  -4.8  -2.79671   AGGCCAAGGGCAAAG             CGAGCA AGGTGG CGCTCG              TGGCGGTCATGCGCA  43 440
LQ332_RS20810 4520161 .. 4520182 -  -9.4  -3.61398   CGCCGTCGCGAAGAA           GCAGGACG ATGCTG CGCCCTGC            ATCGACGTGCAGGTC  63 346
LQ332_RS20800 NONE
LQ332_RS20795 NONE
LQ332_RS20790 NONE
LQ332_RS20785 NONE
LQ332_RS20780 4513514 .. 4513532 -    -3  -3.37796   CGCCACCACTCAGAA             GCCGGTAT TGA ACTCCAGC             TGGAACACGTCGATC  47 1
LQ332_RS20775 4512900 .. 4512953 - -16.6  -3.67188   AGGTAGTGGAAAAGA CCCCGGTCACCCTGGTGATGCGCG AAGGTG CGCGCATCACCAGTGAGCGTGGGG CTGCAGCGTAACCCC  91 153
LQ332_RS20755 4509777 .. 4509799 -  -9.8  -2.96695   CGCGCCACGAAAGCA           CCATCCACGC ACG GCGTGGAGAG           GATCTACGGTTCCTC  59 29
LQ332_RS20750 4509138 .. 4509160 -  -6.9  -3.28712   TTCCTGTTGTGACAA           CGGCGGGCA CGATC TGCCCACGG           CAATCGCCGCTCATC  54 36
LQ332_RS20745 4507960 .. 4508018 - -10.3   -2.5655   GGCATGGACAGGAAC TCCTCAAGCGGGGCGGGACCACGGGCACG TCC CGTGCCGGTGGTGC-GTCTGGCTTGAG-A AGAAACGCTGTTTCG  58 139
LQ332_RS20740 NONE
LQ332_RS20735 4503960 .. 4503985 -  -4.5  -2.71144   CAGCGGGCCGAAGCA         GGGACTGGCGG ATCG CGGCTTGTCCC          TGCCCTGCCCCGTCA  42 53
LQ332_RS20730 4502427 .. 4502442 -  -3.2  -3.19463   GTGATGATCGATGAA              GATCGC GGCC ACGACC               TGTTCACTCCGGCCT  45 54
LQ332_RS20725 NONE
LQ332_RS20720 4500301 .. 4500320 -  -9.4  -2.78596   GACGCCCCCACTATA            CCCAATTT GGCC AAATTGGG             GATAAATCCCCTTTC  56 39
LQ332_RS20715 NONE
LQ332_RS20710 4499043 .. 4499078 -  -8.3  -3.90112   TGTTCGTGAAGGAAA   CCGCCGGC-CTG--CCGC TGC GCGGTTCACCGCCGGCGG   TCGGCAGCGAACGGG  70 237
LQ332_RS20695 4496699 .. 4496717 -  -3.8  -3.18912   GTAGTCACGCATGAA             CGGCAT GCCGGTT ACGCCG             CCAACGCTTTCTGGA  47 18
LQ332_RS20690 4496306 .. 4496327 -  -8.7  -4.19238   TGCGGAAGCGGAAAA           GGTGACCTA TCAC TAGGTCGCC            CTGCAGCCGAGCCTG  72 79
LQ332_RS20680 4493142 .. 4493163 -  -7.9  -3.76373   TGTTGAAGATCGAAA           CG-GCGCCGC TCG GTGGCGCGCG           GGTGGGGGTGCGGTT  64 129
LQ332_RS20665 4489826 .. 4489840 -  -4.2  -2.52464   GCGGGCGGCAAGCGA               CGGTGA ACT TCATCG               AGACTCTCCTTCTGC  41 20
LQ332_RS20660 4488667 .. 4488687 -  -5.3  -2.50291   AATCAGGCGATCAAT            CATGGCGCA GCG TGCCCCGTG            CCGGTGCCGGCAGCG  43 4
LQ332_RS20655 4485106 .. 4485122 -    -5  -3.53091   ACGTGCTGCGCGAAA              GCGCGC GACGG GTGCGC              GACGGTGGCCGGCTG  52 495
LQ332_RS20645 4483171 .. 4483184 -  -3.8  -3.14564   GGAGTTCCCGATCAA               CCAG TACATG CTGG                CCAAGCGCGGCATCT  45 508
LQ332_RS20620 4479504 .. 4479555 -  -4.3  -3.10975   ATGGACCATGCAACA GCTGATACGCGTGGGTAGTGCCGGCC GCT GGCCGGCA--ACCC-CGAGGTCCCGC CAGCCGGCCAGCGGC  45 56
LQ332_RS20610 NONE
LQ332_RS20605 NONE
LQ332_RS20600 NONE
LQ332_RS20595 4475487 .. 4475505 -  -5.2  -3.16151   CCAAGCAGCAACACA             GCGCTACG GTT CATAGGGC             CTCAGCTGGGCATCG  47 10
LQ332_RS20590 NONE
LQ332_RS20585 4474040 .. 4474070 -  -3.1  -3.73775   GTTATGGTCATCAAA       GCCCACCGATTCA GCTTT TGTAGAGGCGGGC       TTGCTCGACTGCGCC  54 92
LQ332_RS20580 NONE
LQ332_RS20575 4471751 .. 4471777 -  -6.4  -3.05384   CCTGGCCTGACCGAA         GGGCAGCCGACC AGC GGTCGGCTCTAC         CACGGGCGATCGAAG  51 123
LQ332_RS20565 4469887 .. 4469900 -  -5.9  -3.30783   GCACCACAACGAACA               CGCCA TCGA CGGCG                GCCTGCTGGTGATCT  52 280
LQ332_RS20555 4466443 .. 4466455 - -10.5  -3.02144   CTACTGGCCGGAACA                GGCGC CTC GCGCC                AGGGCGAGGCGGGCG  62 310
LQ332_RS20550 4465687 .. 4465711 - -17.9  -3.55071   CCAGACGCGTCGAAA          GGTGCCGGTCA GGA CGACCGGCACC          CGCCGTCCATCAGCC  93 35
LQ332_RS20540 NONE
LQ332_RS20535 4462771 .. 4462789 -  -6.6  -3.29461   GAAGCGCCTGGACAA             CCTGCAGG CGA CGCGCAGG             AGCTACCAGGCGGCA  52 340
LQ332_RS20515 NONE
LQ332_RS20510 4457644 .. 4457679 -  -6.2  -3.01745   GGCTCAACAAGCAGA    TCGCCGGTGACCTCG GGGTCAG CGAGATCAC-GGTGA    AGGTCCGCCGTGCGC  48 133
LQ332_RS20475 NONE
LQ332_RS20470 NONE
LQ332_RS20465 NONE
LQ332_RS20460 4444372 .. 4444389 -  -2.6  -3.65812   GGGCTGGGAAGACAA             CGCCGC CACCCT GCAGCA              CGACGTGGATGCGCA  50 363
LQ332_RS20450 4442668 .. 4442704 - -19.4  -3.18467   AAAGCTCGAACGGAA    TGCCAGCCGACGCCGC ACAAG GCGACGCCGGCTGGCG    GGCGCAAACTACATG 100 299
LQ332_RS20445 NONE
LQ332_RS20440 4440642 .. 4440657 -  -2.4  -3.28712   GGCGCTGCTGGAGAA              TGCGCG GCGC CACGCC               ATTCCCTGTCCCTTA  45 324
LQ332_RS20420 NONE
LQ332_RS20415 4435045 .. 4435057 -  -3.3  -3.86015   CAGCCTGCCGATAAA                GGGCA AGG TGCGC                TGAGCAGCGGCAGCG  56 151
LQ332_RS20395 4431796 .. 4431829 -    -3  -3.42056   AGGTGCAACGTAGAA    CGCCCG-GCTCGCTGC TGCT GC-GCGTGCGCGAGCT     GCTGCTGCAGCGCAA  47 260
         xth 4429484 .. 4429494 -  -4.6  -3.38768   CGACACCATCCAGAA                 GGCC GAC AGCC                 GCCTGTACCGTACCC  49 88
LQ332_RS20305 4413840 .. 4413874 - -11.2  -2.90194   ATCGCGCCAAGTACA     CGGCCATGCGCGCGGC CCT GCTGCGCGCCTTGCCC     AGGCAACCTCCCGGG  61 221
LQ332_RS20280 NONE
LQ332_RS20275 NONE
LQ332_RS20270 NONE
LQ332_RS20265 4408999 .. 4409025 -  -9.2  -2.66316   GCCCGCACCACAGTA         CGCCCGAGGCCC TGC GCGCTGCGGGCG         CGAAAGTGATCTTCC  51 107
LQ332_RS20255 4407300 .. 4407325 - -11.2  -2.63073   CTCGCTGAAGAACAT         GCTGCCGGCCA CCACC TGGCCG-CAGC         CGGCCGGGTGTGACC  62 67
LQ332_RS20245 4404205 .. 4404226 - -18.7  -3.53031   TCCAGCCCAAAGGAA           CGCGCCCGC CCCA GCGGGCGCG            CCCTGCTTCAATGCA  93 33
LQ332_RS20240 4402920 .. 4402933 -  -2.3  -3.57462   GATTCGACGCGGAAA               GCACG GTGG CGTTC                GGACTGGCGTCAGGC  50 154
LQ332_RS20200 4391927 .. 4391941 -  -2.8  -3.28712   CCGCCCTGTTCAGAA               CGTGTA TCG TACACC               GAAATACGCACGCCG  45 5
LQ332_RS20195 4390943 .. 4390961 -  -3.7  -4.12532   CGTTCGACAGAGAAA             CAGCAGC CCCGT GCGGCCG             CACGCCACGTTGGCG  62 139
LQ332_RS20190 4390259 .. 4390277 -    -8  -3.21747   GTACCCCAGCACCAA             CTGCGGCA TGG CGCCGCTG             GCACGCGACGTGGCC  53 60
LQ332_RS20170 4386624 .. 4386673 -    -2  -3.10775   ACTTCCAGCGAAAAG GCGTTGATGAAGGCGTCCGCCCGC AGTG ACAGGCC--CGCCGGCATCAGCGC GCTCCGCCCACATTG  42 19
LQ332_RS20165 4385746 .. 4385764 -  -5.9  -3.09933   CCCGAACGTACCCAA             GCCGTAC TACGT GGACGGC             AAGATGAAGTGCGAC  48 59
LQ332_RS20155 4384723 .. 4384766 -  -5.8  -2.57132   CCGGCCCCGCACAAC CCTG-CCTGGGGAAGCCGGCC AGC GGCCGGCACGACCAGGTCAAT CAGCCTGCGGTTTCC  45 25
LQ332_RS20150 4384098 .. 4384110 -  -4.8  -3.30214   AAGTCAGGAGATCAA                TGCG TTTGG CGCA                CTTCAATCGCCCCTG  51 44
LQ332_RS20135 4381432 .. 4381447 -  -3.2  -2.62263   ACTGCTTGTACATCA              TCCCTC CCAG GAGTGA               AGCATCTACGTTGTG  39 83
LQ332_RS20130 NONE
LQ332_RS20125 NONE
LQ332_RS20120 4378708 .. 4378740 - -22.8  -3.34522   AGATCGGGGAAGGAA     GCACGCGCCGCCGGA TCGG TCCGGCGGCGCG-GC      AGACGGGCTCAGCCC 100 48
LQ332_RS20115 4376861 .. 4376903 -  -7.5  -3.57462   CAGGCGATGGCCAAA GCGTCGCCCCACCAGGCCAG CTGG CTGGCA-GGCGGTGCGGCGG CTTTGCTCAGCAACG  60 319
LQ332_RS20105 4375318 .. 4375343 -  -5.4  -3.05384   CCTGTTCGGACTGAA         GCGCAG-GGCA GCACG TACCACCGCGC         ACGCGCGTGGCGATT  47 65
LQ332_RS20095 4373081 .. 4373114 -  -6.7  -3.74872   ATGCAGCGCAGCAAA     TCGACCGCGCACCGAT GCA ATCGATGC-CAGCCGT     CCCGCGCCCCACCCG  62 41
LQ332_RS20090 4369552 .. 4369597 -  -5.1  -2.62184   CTGGCCGGCAGAGTA GCGCAGGCGCGACAGGTGCGGC GAC ACCGT-CCCGGCGCGGCACCGC TGGCGGGCAGCGGTG  43 68
LQ332_RS20085 NONE
LQ332_RS20080 NONE
LQ332_RS20075 4366071 .. 4366092 -  -7.1  -4.65895   CCGTGGACTCAAAAA           GGGGGCGTG CTGT CCGGCCCCC            GCGTTGCCACCGCAT  82 114
        xylB NONE
        xylA NONE
LQ332_RS20060 NONE
LQ332_RS20055 4358727 .. 4358740 -  -3.1  -4.56597   GCCGCGGCTGAAAAA               CTGCTG TCC CAGC-G               CCGGCCGCCGACGGC  71 412
LQ332_RS20045 NONE
LQ332_RS20040 NONE
LQ332_RS20035 NONE
LQ332_RS20030 NONE
LQ332_RS20025 NONE
LQ332_RS20020 NONE
LQ332_RS20015 NONE
LQ332_RS20010 4345254 .. 4345278 -    -2  -3.53012   CTGCCTGCCGCGAAA          CGGCGTGC CATGGCCCT GCTCGCCA          ATTCCGGTGCGGCGC  47 115
LQ332_RS19990 NONE
LQ332_RS19985 4341941 .. 4341955 -  -2.1   -3.1247   AGTGGGGACAGGCAA              TGACCG TAGG CGG-CA               GGCGGTCACATCACT  42 86
LQ332_RS19980 NONE
LQ332_RS19975 NONE
LQ332_RS19970 NONE
LQ332_RS19965 4338901 .. 4338928 -  -4.2  -3.53012   TCGCGGGGCCGTAAA        GGACAGGCGTG CAGGCCT CACG-CTATCC        CCAATTCAGCACCGT  51 20
LQ332_RS19960 4338229 .. 4338267 -  -2.3   -3.6502   CATGGTCCATGGAAA  GCCCCGGTATCGCCTCAC TTGC GT-AGGCGATTGCGCGGA   GGGGCACGTTGATTC  50 169
LQ332_RS19955 4337480 .. 4337513 - -13.3   -3.6715   GCATGCAATCGGAAA     TGAACCAGC-GCAGGT GCA ACCTGCTGCTGGTTGA     AGACCAGCTCGACCT  78 388
LQ332_RS19945 4336884 .. 4336922 - -12.5  -2.52742   ATGCCGTCATAACAT  CCG-CTG-GTGCGTGGCAA CGC CTGCCGCGCACTCAGGCGG  GCATCGCGCCGGACA  64 18
LQ332_RS19940 4336238 .. 4336259 -  -2.8  -3.15544   CGGGATCGGGATCAA           CGCTTGGC TTGGGC GCCGGGCG            TTTCGTCACGGTTGA  43 0
LQ332_RS19935 4334936 .. 4334970 - -11.2  -2.95751   GGACGAAGACAAGCA     GCGCGAGATCGCCGCC AAG GGCGGCCGCGCCGCGC     ATGAATCGGGCAACG  61 344
LQ332_RS19925 NONE
LQ332_RS19920 NONE
LQ332_RS19915 4332146 .. 4332159 -  -9.5  -3.17688   GAAGCAGCTGACCAA               GGCGC TTCC GCGCC                TGGCCCGTGCGGCCG  60 472
LQ332_RS19905 NONE
        ligD NONE
LQ332_RS19895 4328305 .. 4328324 -  -9.2  -3.76492   CGCAACTGGAGGAAA            TGCTGCCC ACCT GGGCAGCG             TTCTATCCCGAGCCG  67 196
LQ332_RS19885 4326411 .. 4326438 -  -9.1  -4.16842   CCCATCTTGAAGAAA        TACGCCAGCGC TACGAG GCACTGGCGAA         GACCGCTGCAGACAT  75 123
LQ332_RS19870 4322867 .. 4322898 -  -2.8  -3.09516   CGCCTGATCAGCGAA      CGCGTTGCAGC-CGC CCG GCGTGGCGCAGTGCG      CTGGCCGGGCATGGC  43 45
LQ332_RS19860 4320775 .. 4320798 - -19.6  -4.15044   GCGGGCGGCAAGAAA          CCACCGCCGC CGAA GCGGCGGTGG           CCGGGGACGGATCGG 100 226
LQ332_RS19855 4320125 .. 4320154 - -19.3  -3.54489   GGAACGGGAAAGGAA       GGAGGCCGCCAGC GCCT GCCGGCGACCTCC        TGCGATCAGTTGTAG 100 31
LQ332_RS19850 NONE
LQ332_RS19845 4316613 .. 4316634 -  -2.9  -3.17219   GACAAGCGCGATCAA           TCGCGCGACC AGA GG-CATGCGA           ATCACGGTGCGTTCT  43 27
LQ332_RS19840 NONE
LQ332_RS19835 NONE
LQ332_RS19830 NONE
LQ332_RS19825 4314053 .. 4314088 - -10.4  -3.53012   GTCCTGCGCCTGAAA    CGCG-AGGGGACGGC CTCGGTT GCCGTCCCCCACCCG    CGTGATCAGTTGTAC  69 31
LQ332_RS19810 NONE
LQ332_RS19805 4306145 .. 4306155 -  -2.4  -3.95584   TTGGCATCAACGAAA                 TCGC CGA GCGC                 CTGGACAGGCGCAAG  56 172
LQ332_RS19795 4304827 .. 4304839 -  -3.3   -2.6039   AGACCATCGGACAAT                GCCTG AAT CAGTC                CGATTCTCCACCGGC  39 20
LQ332_RS19790 4304416 .. 4304471 -  -4.6  -4.08216   GGACTCGTCCCAAAA GCGGGGGACGC-GGCGTTGCAG-GCCT GCCCG AGGCGCTGCGG-GCGTGCGCCGCCCGC CCCGGCAGGTGCCAC  64 78
LQ332_RS19785 4300429 .. 4300443 -  -7.1  -2.78384   TGGCGCGCCATCAGA               TGCGG GGTCG CCGCA               TCTGATGGCGGACAC  48 54
LQ332_RS19780 4299067 .. 4299111 -  -7.1  -4.25104   GTTCCTGCAGGAAAA GTGACTGGCGAGGGCTCCGGC GCCGT GCCGGAGCCCT--CCTGTTGC CTGGCGCCCACCTTC  72 39
LQ332_RS19770 NONE
LQ332_RS19765 NONE
LQ332_RS19760 4295648 .. 4295658 -  -3.2  -3.28924   CATCGGGTTCCAGAA                 CATC CCC GACG                 ATCGCTTCCTGCAAC  47 396
LQ332_RS19745 4293162 .. 4293180 -  -4.4  -3.53811   TGCATGCGCTGGAAA             TGGGCACC CGC GGCACCCC             CGATGAACATCCCGA  51 238
LQ332_RS19735 NONE
LQ332_RS19730 4289779 .. 4289801 -  -6.2  -3.14132   GGCGCGGCTGAGCAA           GCTGCTACCG CCC CAAAAGCAGC           GAGGAGCACGAGCAG  49 67
LQ332_RS19725 NONE
LQ332_RS19720 4288180 .. 4288192 -  -3.3  -4.07568   TGGCGTTCGGGAAAA                TCCCG TGG CTGGA                TGGACGCGCTCACAC  60 419
        paoA 4287481 .. 4287496 -  -4.6  -3.17075   GCGTTCGTAACTGAA              GGCCCT CATG AGCGCC               TCCCTGTAGAGGTCA  47 15
LQ332_RS19705 NONE
LQ332_RS19700 NONE
LQ332_RS19695 NONE
LQ332_RS19690 4282267 .. 4282287 -  -8.9  -3.31461   GATCGATTCTTACAA            CTGCGCCGC CAG GCGATGCAG            TTCGTGGACTCTCGG  59 383
LQ332_RS19670 4280068 .. 4280080 -  -3.4  -3.55563   ATCTGAGTGTGGAAA                TCGA CCTGC TCGA                GTTTGAATGTTCTCT  49 132
LQ332_RS19665 NONE
LQ332_RS19660 NONE
LQ332_RS19655 4276088 .. 4276104 -  -4.3  -4.61231   TGACACCTCGAAAAA              CAGCTAG AAT CCAGCAG              AAATCCTAAGGCAGG  75 454
LQ332_RS19610 NONE
LQ332_RS19605 4263492 .. 4263507 -  -4.6  -4.27316   GGTCTGAAGGGAAAA              GGGCAA ATTT CCGCCC               GGCAGTTCAGCCAAG  69 421
LQ332_RS19590 NONE
LQ332_RS19585 4258579 .. 4258597 -    -3  -3.70902   GCGGTGACAGTGAAA             CTGCTCTG TTA CAGTCCAG             TGCACCAGGCCCCTG  54 187
LQ332_RS19580 4257203 .. 4257216 -  -2.3  -3.58522   ACGATCAGGTCGAAA               CGACC CGTC GGCCA                CTCCTGCAGTTTCTG  50 305
LQ332_RS19565 4255243 .. 4255261 -    -6  -3.73953   ACTATCCGTACCAAA             TGGCCA TTGCGCT TGGCCA             GGAGCTCCCAGCCAG  61 326
LQ332_RS19535 4250139 .. 4250156 -  -9.8  -3.61089   CCCGAACAAGGAGAA             CGGGCC TCAAGC GGCCCG              TTTTCATTTGAACTG  68 59
LQ332_RS19525 4248552 .. 4248565 -  -8.1  -3.06815   AGGTGCTTGAACAGA               CCCCA TAGA TGGGG                AGAACCTGATCGAGA  55 63
LQ332_RS19505 NONE
LQ332_RS19500 NONE
LQ332_RS19495 4240791 .. 4240814 -  -3.6  -3.12327   TTTCGATAGCCAACA          GGGATCCGGC GCAC GCCGGCGCGC           ATCACCCTGCGATCG  43 27
LQ332_RS19490 NONE
LQ332_RS19485 NONE
LQ332_RS19480 NONE
LQ332_RS19475 NONE
LQ332_RS19460 4231054 .. 4231065 -  -5.8  -4.08706   CCGCTAGCAGACAAA                CGAG CAGC CTCG                 TCAGTCGGCTCCCCC  66 26
LQ332_RS19450 4229678 .. 4229695 -  -6.3  -4.63218   CGGTCGTGAACAAAA             TCTCAAG TAAG CCTGAGA              TGTCGCGACTTGTCA  79 135
        copL 4229084 .. 4229102 -  -2.4  -4.30576   CGTGGACCACGAAAA             TCATCATG CGA CATGAAAA             TGCTCCAAGCGTCGT  63 134
LQ332_RS19440 NONE
LQ332_RS19435 NONE
LQ332_RS19430 NONE
LQ332_RS19425 4224564 .. 4224585 -  -6.5  -2.77899   TGCGCGGATGAAGCA           TCCTGGGTG CAAG CACCCAGAC            CAGCCACGGCAAGGA  48 92
LQ332_RS19420 4224090 .. 4224111 -  -2.9  -3.01712   GGCGCGCCCGCAACA           CCGTCCC CTGTTGCT GCGACGG            ATCAGTGCTGTGCGA  42 27
LQ332_RS19415 4223658 .. 4223683 - -12.6  -2.62184   GCTTTCGCGAGACGA         GGATCCCACC GGCTCA GGCGGGATCC          TCGACGCATTACGCT  64 34
        copC NONE
        copD NONE
LQ332_RS19400 4219803 .. 4219814 -  -2.2  -2.62184   CCTTGTGGGATATGA                GCCA TCAG TGAC                 AGGAATGGCCGCGCG  38 18
LQ332_RS19395 4219465 .. 4219492 -   -12  -3.63837   AGAACGGCGGAAGAA        CCCGCGAACTGT TGGA ACAGCTCCCGGG         CTGAGAACACTTACA  77 36
LQ332_RS19390 4218788 .. 4218804 -  -5.1  -3.15544   CTGGATCCGGATCAA              GCCAC CGCACGT GTGGC              CGCGCGTTTGATCCA  47 98
LQ332_RS19380 NONE
LQ332_RS19375 4217360 .. 4217393 - -16.9  -4.84017   AAGTCCCCACAAAAA     GACGCCAGTCATG GAAGAAGT CATGACTGGCGTC      AAAGGGGAGAGTACC 100 58
LQ332_RS19340 4209779 .. 4209808 -  -2.8  -2.64933   CATGCACGTACACGA       TCGCATCCATCA GTCGCT TGAAGAATGCGC        GTTCCTCGGCCGCAC  39 128
LQ332_RS19335 4208964 .. 4208975 -  -4.4  -3.76952   CTGACCCAACGGAAA                CCTT CAAG AAGG                 CTCTGACCGTCGCCT  56 17
LQ332_RS19330 NONE
LQ332_RS19325 4207288 .. 4207299 -  -4.4  -2.58418   TCGCGAGATAAAACG                CAGA TGCA TCTG                 GTTAGCTGGACGCGA  41 368
LQ332_RS19320 4205808 .. 4205818 -  -5.4  -3.02461   GAACCCTCGCGAAGA                 TCCA CTA TGGA                 GACGCCGTCGATTTC  46 121
LQ332_RS19305 4202764 .. 4202774 -  -8.2  -3.29144   CTATCCGCGCCAGAA                 CGGC CTG GCCG                 TGGCCCTGCGCGAGC  59 447
        merR 4195030 .. 4195041 -  -5.8  -3.29096   TCCACCAAGCACCAA                CTCG GTCC CGAG                 TTGCTCGATCGGCAA  51 289
LQ332_RS19255 4191898 .. 4191945 - -12.6  -2.71144   TAGCCGGTGCAACCA GGGCAGGCACCAGCGGAAGGGA CCAG CCCCTTCCGCTGAAGCGTTCCG GGCGCTGGTTCAGAC  65 155
LQ332_RS19250 4190597 .. 4190611 -  -5.6  -3.72695   AGCGCCCCTACGAAA               GCGCCT CAC ACGCGC               TGGCGGCGTTTCGGC  60 16
LQ332_RS19245 NONE
LQ332_RS19185 4182806 .. 4182817 -  -3.6  -4.11216   TGGTGATGCGGAAAA                GCCC GGAG AGGC                 TGCGTTGGAGCAGAG  63 515
LQ332_RS19165 4177150 .. 4177167 -  -5.5  -2.52464   GGGGCCGCCAATGGA             TGCAGGC GATT GCCTTCA              GTCCGAAGAGCCGAC  45 23
LQ332_RS19160 4176475 .. 4176487 -  -2.6  -3.61089   GCCGAAGAAGGACAA                GGCC TGGTC AGCC                ATTCGTCGGCGCGCG  50 146
LQ332_RS19150 NONE
LQ332_RS19145 NONE
LQ332_RS19140 4170869 .. 4170920 -  -7.2  -4.66537   GGCCGGAAGAGAAAA CCCGCCGGCCACGATCGAGTGCG CGGATAT CA-ACCGGATCGCGGCGGGCGTG CGCGATCCGTCGGCC  82 46
LQ332_RS19120 NONE
LQ332_RS19115 4166987 .. 4167006 -  -2.8  -2.52896   CGATGCCCGAACCGA            TGAC-GGCG ATG CGCATGTCA            GTACCTCGCCTTGGC  39 23
LQ332_RS19110 NONE
LQ332_RS19105 NONE
LQ332_RS19100 NONE
LQ332_RS19095 NONE
LQ332_RS19090 NONE
LQ332_RS19085 4161291 .. 4161303 -  -3.4   -2.5602   GAAGCAGCGAACGGA                TGTG CATGT CACA                CCTCAGCGGGGACGG  39 28
LQ332_RS19080 4160680 .. 4160704 - -11.5  -3.58522   ACGACTATTCCTAAA          GATCGATGGCT CTG ATCCATCGATC          CTTGTTCATTCATGA  74 85
LQ332_RS19075 NONE
LQ332_RS19070 4157254 .. 4157273 -  -2.7  -3.79747   GCATCGACGAGGAAA            GCCCGCG CGTGGT CAAGGGC             GGCGAAGAAGGCCAG  53 383
LQ332_RS19020 4146710 .. 4146732 - -15.6  -2.64925   ACAGGGCAGCAGAAT           GAAGCCGGCA TTT CGCCGGCTTC           GTCCTTACTTGATGG  77 30
LQ332_RS19005 4143036 .. 4143054 -  -5.9  -3.54602   CAAGGAAGAGCAGAA             CAGCCCG CTGAC CGCGCTG             ATCAATCCGGCGCTG  57 398
        trxB 4136936 .. 4136965 - -19.3  -2.91144   GCACTCCTGAAAGCA       CGAAGGCCGGCGC TTTC GCGCCGGCCTTTG        GTCTCGGTCGAGCAT  93 71
LQ332_RS18975 NONE
         aat 4133240 .. 4133250 -  -2.4  -4.36914   GTGCGGTTCAGAAAA                 CGGC CAC GCTG                 GGCCTAAGGCGCAGT  65 78
        infA 4132948 .. 4132968 -  -9.7   -4.4767   GCAGGCATGACAAAA            GGCCAGC AACCAGG GCTGGCC            TTGTCGACGTGGCGC  86 55
LQ332_RS18960 4132376 .. 4132393 - -14.1  -3.29043   AACCCTTCCTGACAA             GGGCGGC TTCG GCCGCCC              TTGTTGTACGCGACG  78 41
LQ332_RS18940 4128142 .. 4128167 -  -4.6  -3.31461   CATGGACCTGGACAA         GGCCACGCAG GTGATG CTGCACGTCC          ATACCCGCGGCCGCG  49 230
LQ332_RS18930 NONE
LQ332_RS18925 NONE
        mnmA NONE
        hflD 4125148 .. 4125159 -  -3.6  -4.18018   CTTTTCCATGGAAAA                GGGC TCTG ACCC                 CACACCCTCAGGCCA  60 33
LQ332_RS18910 4123758 .. 4123778 - -15.4  -3.70902   CGGGTCACAGGCAAA            GGCCCCGG GCGAA CCGGGGCC            TTGCGGGCTGCCGGC  90 61
LQ332_RS18905 NONE
LQ332_RS18900 4122575 .. 4122596 -  -5.1  -2.52896   GCACGGCGGAAGTCA           CCCAGGC CATCGTCC ACCTGGG            CCACGCGCTGGGCAT  42 357
LQ332_RS18890 NONE
LQ332_RS18885 4115841 .. 4115896 - -35.6  -2.64616   CGGGCACCCAGAGCA GCCGGCCAGCGGCCGGCTCTACCA GGACCAAT CGGTAGTGCCGGCCGCTGGCCGGC AACCTCATCGAACCG 100 161
LQ332_RS18860 4111383 .. 4111403 -  -3.1  -2.91695   GGTAGTCGGAAATCA            GGTTGCGCA CGG TGCACTCCC            ACGGGAACGTTGCCC  42 153
        flgB NONE
        flgC NONE
        flgD NONE
        flgE NONE
LQ332_RS18835 4107838 .. 4107865 -  -2.5  -2.71712   GGCGGCGCCGGAAAT        CCGTCAGCTGC CCAGGC GCAGCAGGCTG         TTGGCACTGCGCGCG  38 1
        flgG NONE
        flgH 4106243 .. 4106255 -  -6.2  -3.39327   TGGCCATACTCAGAA                CGGC GTCAG GCCG                GAATTGAAGAAGCGG  53 7
LQ332_RS18820 NONE
        flgJ 4103904 .. 4103916 -  -5.5  -2.70932   GGGGTTCCTCAACGA                CGGGT GAT ACCCA                GCGCCGCGGTCGCGG  46 6
        flgK NONE
        flgL 4100760 .. 4100784 - -21.5  -4.98531   CGCGCAAACGAAAAA          GGCCGCGATGC AGG GCATCGCGGCC          TTTCGGGGTGACGCA 100 50
LQ332_RS18800 NONE
LQ332_RS18795 NONE
LQ332_RS18790 4096436 .. 4096458 - -13.4  -5.00616   GGGGTCTGCAAAAAA           CCCTCCCCCA ATG CAGGGGAGGG           ATCAGGCTACTGACA 100 239
        fliD NONE
        fliS NONE
LQ332_RS18775 NONE
LQ332_RS18770 4093355 .. 4093388 -  -7.3  -2.53995   ATCCACCTTAACTTA     GCTGAACGGGCG-CGC CAA GGGTCGGCCGTGCAGC     GCCAAGGGGACGGGT  50 42
LQ332_RS18765 4092656 .. 4092681 -  -4.5  -3.59979   CTTTTCCACGGGAAA         GGGCGCTGACC CCGG GACCGGCGCTC          ACTCGAGCTCGTGCT  53 24
        rpoN NONE
LQ332_RS18755 NONE
LQ332_RS18750 4088999 .. 4089030 - -16.6  -3.95219   TGCAAATCCCACAAA      CACCAACGCCCGGG CAAG CCCAGGCGTTCGTG       CCCCCTTCATGCTGG  95 50
LQ332_RS18745 4088380 .. 4088399 -  -3.4   -3.5332   AAACGTGGAAATGAA            GCGGGGTC AGCT GACCACGA             TGGCCTCATCTTCGT  49 31
LQ332_RS18740 4087679 .. 4087733 -  -6.4  -3.55444   CGGGGACGCCGTAAA CCCGTCCTTGGGGGCTTGGCCGCGGCA TTCA TGCCGCGGACAC-CCCGCAAC--CGGG CCCACCCCGCCTTCG  57 179
        fliE NONE
        fliF NONE
        fliG NONE
LQ332_RS18720 NONE
LQ332_RS18715 NONE
        fliJ NONE
LQ332_RS18705 4080636 .. 4080658 -  -3.3  -3.05384   TGGGGTGCGACGGAA           TTCCGTCGG AGGCG CGGACGGGA           GGGTGCCGATCCTCG  43 118
LQ332_RS18700 NONE
        fliM NONE
        fliN NONE
        fliO NONE
        fliP 4077501 .. 4077519 -  -4.4  -2.62184   TTTGTGGGGATATCA             GGCCGGAT TGA AGCTGGCC             GCCAACGTGCCCACG  41 4
LQ332_RS18675 NONE
        fliR NONE
LQ332_RS18665 4073900 .. 4073924 -  -6.3  -3.61715   GAGTGCGTGCAAGAA          CCGTTCCACGC ATG GCGTGGATCTA          CCGACAGCCCGTTCT  57 166
        flhB NONE
        flhA NONE
        flhF NONE
LQ332_RS18645 NONE
LQ332_RS18640 NONE
        cheY NONE
LQ332_RS18630 NONE
LQ332_RS18625 NONE
LQ332_RS18620 NONE
        motD NONE
LQ332_RS18610 NONE
LQ332_RS18605 4060311 .. 4060335 - -12.9  -3.05816   GCAGTGGGGACGTAA          GGTGTTGATCC AAC GGATCAACTCC          TTGCGTCCCCGACAG  72 105
LQ332_RS18600 NONE
LQ332_RS18595 NONE
LQ332_RS18590 4057383 .. 4057404 - -18.7  -5.27335   GCGCGCAAACAAAAA           CCGCCGCCC CGAG GGGCGGCGG            TTCAGTGCACGCTTG 100 50
LQ332_RS18585 4054788 .. 4054800 -  -5.5  -3.53012   CTTTCCCGCGGGAAA                GGGAT CTG ACCCC                GTGGTTCTGTCAGAA  55 35
LQ332_RS18580 4053370 .. 4053389 -  -2.8  -3.61764   CGATGAACCGCGAAA            GTGGCACCT GGC AGG-GCCAA            CGGCGGATCAGTGGT  50 512
LQ332_RS18570 4051691 .. 4051701 -  -2.4  -3.54424   GCCGACTGGGCGAAA                 GCGG AGG CGGC                 GGTGGTGGCCAGGAC  47 209
LQ332_RS18565 4051324 .. 4051349 -   -14  -3.96148   CGGTTGCAGCAGAAA         CCACGCCAGG ACCAGG CCCGGCGTGG          TCCGACGAACGGCGG  93 42
LQ332_RS18560 4048834 .. 4048868 - -23.7  -3.54129   CAGATGCCCCGTAAA     CGAAGACGCCCCGGC GCGGG GCCAGGGCGTCTTCG     TGGATCAGGTCAGGC 100 46
LQ332_RS18555 NONE
LQ332_RS18550 NONE
        cheD NONE
LQ332_RS18540 4043370 .. 4043384 -  -3.4  -3.53012   GCGCTTCCCGGCAAA               GCGCAC ATT GCCCGC               AGTGGTGCTGCCGGC  49 107
        acnA 4035857 .. 4035882 - -20.5  -3.85165   CATCGCAAACGGAAA         GGGCCGGATCC GTGC GGATCCGGCCC          TTTTTCGTTACTTGC 100 33
        betI NONE
        betB NONE
        betA 4030063 .. 4030092 -  -8.5  -4.18018   CCGCCGTAGGGAAAA       CGCGAAGAGGCCC CGGA GAGCCTCTTTGCT        GGGTAGTGCCGGCCG  72 126
LQ332_RS18485 4028240 .. 4028267 -   -22  -3.59979   GCGTCGCATGCGAAA        GGGCCCGGGACG TTTC CGCCCCGGGCCC         TGCATCGTTCAAATT 100 52
LQ332_RS18480 4027213 .. 4027231 -  -8.8  -5.53288   GTGAATTCAAAAAAA             GCCCGG TGGCCAG CCGGGC             TTGAACCCATCCTGG 100 54
LQ332_RS18425 4009945 .. 4009955 -  -4.6  -3.62046   GCAGTTCTGGAAGAA                 GCCG CGC CAGC                 TCCACGACTGATCGG  55 150
LQ332_RS18395 4002283 .. 4002303 -  -6.7  -2.96249   TCCGACCAAGAAGTA            GCGTCGAGC CAT GCTCGGCGG            CGGCCGCCGGGTGGG  50 71
LQ332_RS18375 NONE
LQ332_RS18370 NONE
LQ332_RS18365 3997658 .. 3997671 -  -9.5  -3.18274   CCGATTCTAACGGAA               GCGGC GACC GCCGC                CGTTGTGCACTGCGC  62 71
LQ332_RS18360 3996848 .. 3996860 -  -3.3  -2.70932   GCCCGGGGGGAATCA                CTTCG GAG CGAGG                CGGGTGGCGCCGTCC  40 10
        yeiP 3995793 .. 3995828 -  -3.2  -3.09933   GTCGAACCCACCGAA   GGCGATGGCAGCGCGG GCACGG CCGCGTT-CCG-CGCC    ACCGGCAACGAGCCG  43 426
LQ332_RS18330 3989743 .. 3989784 -  -2.8  -2.65815   GCGACATCGACACGA TGATGTGGCGGCTGAGCC CGGAGC GGCGCAGGCGGGCCATCA  GCGGTCGGCCATCAG  40 23
LQ332_RS18325 3988350 .. 3988368 -  -8.1  -3.01712   GCTGCTGCTGGAACA            GGCTGCGC AGCG GCGC-GCC             GAGCTGCGCGCGCGC  52 363
        serA 3983668 .. 3983721 - -34.3  -5.03314   GGCACGTTGAAAAAA GGGACGGAGGGGATTAAGTCGTTAA TGCA TAAACGACTTAATCCCCTCCGTCCC CTTTTTACCTAGTAC 100 34
LQ332_RS18295 3981409 .. 3981431 - -17.7  -2.74605   GCGCGGGAAAACGGA           CGGGCCGGC GCGAG GCCGGCCCG           AAGGCGGATCAGGGC  84 34
LQ332_RS18290 3979605 .. 3979628 -  -3.8  -4.56736   AGTGAAGAAGGAAAA          GC-GAAAAGCG GGT CGCTTCGCTGC          GCTTGCTCGCAGCCG  71 328
LQ332_RS18285 NONE
LQ332_RS18280 NONE
        mtnC 3977327 .. 3977376 - -31.1  -3.23611   AAAAAAGGGGACGAA GGGGATTAAGTCGTTTGTGGCCC ATGT GTGCCACAAACGACTTAATCCCC TCCGTCCCCTTTTTC 100 45
LQ332_RS18240 3963096 .. 3963125 - -18.7   -4.7497   TGCATCCATGAAAAA       CGGCAGCCAC-CTG TAC CAGCGTGGCTGCCG       TGGAGGACCCTCCCC 100 84
LQ332_RS18235 3962730 .. 3962759 - -16.4  -4.19817   CGCATGCATTGAAAA       GCCCGCCCTGTG ACAGTG CACGGGGCGGGC        TTCGTTGTGGATGCC  95 51
LQ332_RS18130 3940179 .. 3940214 - -11.8  -3.10343   AGATGGAGGATGCAA    CACGGGTAGTGCCGGCC GCT GGCCGGCAAC-CCCACG    AACCGCGATGCGGTC  69 39
LQ332_RS18085 3930605 .. 3930634 - -15.8  -3.11634   GTCGACATCATTGAA       CTGGCGCGTGGCC GCCTG GGCCA-GCGCCAG       TTTCCGTACTGGTCG  80 197
LQ332_RS18055 NONE
LQ332_RS18050 3922681 .. 3922708 -  -3.4  -2.54896   GCCGGACGCAAGCGA        CCAGCGCGTGG GTTTCGG CCAGGC-CTGG        TCCACGCAGCCGGGC  40 304
LQ332_RS18040 3921047 .. 3921073 -  -7.8  -2.88544   GCTCAGCTGGATAGA         GCGTCCCCCTCC TAA GGGGAAGGTCGC         CCGTTCGAATCGGGC  50 487
LQ332_RS18030 NONE
LQ332_RS18025 3918428 .. 3918439 -  -3.6  -3.72576   CCTTGGTCGACGAAA                GGCG TGCC CACC                 CAGGTTGACGGCTAC  54 54
LQ332_RS18020 NONE
LQ332_RS18015 NONE
LQ332_RS18010 NONE
        murB NONE
LQ332_RS18000 3914130 .. 3914146 - -10.9  -2.79321   TCCAGACGAAGAGCA              GTCGACT GAC AGTCGAC              TCTACCCATGGTCCG  64 53
LQ332_RS17975 3907813 .. 3907823 -  -2.4  -3.28712   GTTGCTGGGCCAGAA                 GCTG GAC CTGC                 TCAGCGATGCCAACT  45 339
LQ332_RS17965 3905981 .. 3906000 -  -9.2  -3.00298   GCCGGGAAGCAGACA            GCGCAGGG GTTG CCCTGCGT             TCGGCGCTCGACGAT  55 374
LQ332_RS17955 3901691 .. 3901710 -  -7.1   -4.4595   CCAGAAAATCGAAAA            GCCC-GCC GATGT GGCCGGGC            TGAAGGTGGTGGTCG  79 506
        ftrA 3889975 .. 3889989 -  -2.8  -3.95584   GCTGGAGTAAGCAAA               TGCATG GAG CATGGA               AGGGGCTTCTTGTGA  58 117
LQ332_RS17895 3889503 .. 3889526 - -10.2  -2.52896   TGACGCCTGAACGCA          GCGCGCGGCCG CGG CGG-CGTGCGC          GTGCAAGGCGACGGT  58 51
LQ332_RS17890 3888811 .. 3888833 -  -5.5  -3.90112   CCGGCGTCAACGAAA          CGCTGACCCG CTTG CCGG-CAGCG           CATCCGATTGCAGCG  60 169
LQ332_RS17870 3885896 .. 3885913 -    -7  -2.80816   TTTGGACGGACTATA             TGCAGG TAAATG CCTGCA              TTTCAAATCCAGCCC  49 142
LQ332_RS17865 NONE
LQ332_RS17860 NONE
LQ332_RS17855 NONE
LQ332_RS17850 NONE
LQ332_RS17845 NONE
LQ332_RS17840 NONE
LQ332_RS17835 3881443 .. 3881457 -  -7.8  -3.61715   CATTCTGGTGAACAA               TGCCGG CAT CCAGCA               CACCGCGCCGATCGA  60 521
LQ332_RS17825 3879132 .. 3879173 - -11.5  -3.17212   CCACCAGCGCAGCAA GACCACAGCGCTGGTCTGCC ATG GGCCGATC-GCGCTGCTGTC CACGCTGCCGGATGC  64 475
LQ332_RS17815 3877214 .. 3877271 - -14.2  -3.85817   ACCGCCCGCCAGAAA GGCCGACGGATTGCCCGCCGGCACCG GTTAAGGA CGGTGCCGGCGGGCAAGC-G-CAAAC TACAGACGCGTACAT  88 386
LQ332_RS17810 3876369 .. 3876379 -  -2.4  -3.58305   AACTAACGGCCGAAA                 GCGG CAA CCGT                 CGTCTTTCCCTGGAT  50 369
LQ332_RS17725 NONE
LQ332_RS17720 3854137 .. 3854163 -  -3.7  -3.02263   ATAGGGGTTGGAAGA        GGTTGT--CGGCC AGC GGCCGGCACTACC        GATGTCTTCCGTCAG  44 37
LQ332_RS17715 3852610 .. 3852654 - -21.7  -3.11178   GAATCAAGGGCAAGA GCAAAAGCAAAAAAGGCAGCC GAT GGCTGCCTTTTTTGCTTGTGG GGTTGCTTGTGGGGT 100 268
        ykgO 3843727 .. 3843740 -  -9.5  -5.72622   CGCATAAACAAAAAA               CCGCC CGAA GGCGG                TTTCTTGCATCGGGT 100 83
LQ332_RS17665 3843298 .. 3843316 -  -5.8  -2.87132   TGGTCTCGCTACACA             GGCCCGCC CAC GGCGGGTA             AGGGGATCAACGGAT  47 32
LQ332_RS17660 3842201 .. 3842215 -  -5.6  -2.52543   ATCCCCGTCAATCCA               TCAGGC ATT GCCTGG               TTGCCGGCCAGCGGC  45 56
LQ332_RS17655 NONE
LQ332_RS17650 NONE
LQ332_RS17645 3839382 .. 3839438 - -10.8  -3.35371   CATAGTGCCAACCAA GGTTGGCA-CCTACCGGTAGCGCCGGGC CAT GCCCGGCGGAACCATCAGCCTGCC-ACC TTGCCCCACACCTTG  67 13
LQ332_RS17625 NONE
LQ332_RS17620 3830350 .. 3830381 -   -10  -3.40867   GCACCCACCAATCAA      CGGTCCGTGCGGAC CAAG GTCCGCCCCCACCG       GGGGCCGGCGGTCAT  67 37
LQ332_RS17605 NONE
        dbpA 3824628 .. 3824639 -  -5.8  -2.69964   GCCTCAATCACATCA                TCCG CACG CGGA                 AGCGACGGCCCTTGA  46 6
LQ332_RS17590 NONE
LQ332_RS17585 3820119 .. 3820131 - -10.5  -3.61398   CGCGGCCCGCAACAA                CGGCG TGA CGCCG                GAGCAGATCAAGGAA  67 216
LQ332_RS17505 3804192 .. 3804204 -  -9.1  -4.19817   GCGACGCATCGAAAA                GGCCT ATG AGGCC                CTGGCGCCGGCGCTG  75 420
LQ332_RS17495 NONE
LQ332_RS17490 3801849 .. 3801876 -  -7.6  -3.07816   CCGGCACGCATCGAA        CGGCGATGTGGT TCAC ACCACGCTGCCG         GCAGCGTGGCCGCTG  55 10
LQ332_RS17485 3799603 .. 3799620 - -14.1  -4.21194   CCTGATCAGCGAAAA             GGCCGGC GAAC GCCGGCC              TTTTCTTTGGGTAGT 100 105
LQ332_RS17450 3790431 .. 3790469 - -16.6  -4.54727   GTGCGGAAACGAAAA   CGCCCCGTCGCCGATCGC AGA GCGGTCAGGGACGGGGTG   TCCTTGGATTATGGG 100 207
LQ332_RS17445 3789766 .. 3789800 -  -9.1  -3.05384   CCGCCCGGCACCGAA    GGCG-CGCGCGGTGGC CTGA GCCGCCGCGCGACGTT     GCTTCACCGCAGGGC  60 29
LQ332_RS17435 NONE
LQ332_RS17430 NONE
LQ332_RS17425 NONE
LQ332_RS17420 NONE
LQ332_RS17415 3782373 .. 3782395 -  -4.9  -4.56597   TGCCCTTGGCAAAAA          GCGTGTCGACC AGG GG-CGACAC-C          TACCCAGAGAGGGGC  74 92
LQ332_RS17395 3777593 .. 3777603 -  -2.4  -4.63527   CGATCATCGGAAAAA                 TGCC GCA GGCG                 TCTGCCCCAGCTGGC  70 3
        recN 3770366 .. 3770378 -  -4.7  -3.14132   TGCCCGTGCCAGCAA                CGGCG ACG CGCTG                CGCCAGCTGGTGCTG  47 364
LQ332_RS17360 3768277 .. 3768294 - -14.1  -3.76224   CCGCCAGCGACGAAA             CCCCGGG CCTG CCCGGGG              TTTTTGGTTGATGGG  86 42
        bamE 3767266 .. 3767302 - -15.3  -3.64703   GCTGGCCGATCCAAA   GGA-CAACCGCCG-GCG TCGCG CGCTCGGCGGTTGATCC   CGGCAACCCGTCGTT  87 58
        smpB NONE
LQ332_RS17330 3765161 .. 3765182 -  -4.3  -3.05463   ACCGGGCTGACCGAA           CTGCCGGCCA CCG CGGCC-GCGG           CACTGGTTGCCAGCG  43 467
        ssrA 3764298 .. 3764314 -  -9.4   -4.5032   TACAGGAACAAGAAA              GCGGAC ATGAA GTCCGC              TAGGTCGGCGTATAA  86 160
LQ332_RS17315 3762244 .. 3762275 -   -10   -3.0094   TTGCACTGATATACA      GGCGAAGGCCCCGG CGAG CCGGGGCTTTAGCT       AACCTCGTTTCGAAA  62 473
LQ332_RS17305 3759334 .. 3759347 -  -2.3  -3.05816   CGACCGGCTAGGGAA               GATCC CCTT GGAGC                GCCATGCACATCCAC  42 4
LQ332_RS17300 3758472 .. 3758483 -  -2.2  -3.88232   CTTGCGATACAACAA                TGCC AATC GACA                 GCGGACTCGCATGTC  56 181
LQ332_RS17280 NONE
LQ332_RS17275 3754568 .. 3754601 -  -4.6  -3.25072   CTGATCACAACTGAA     GC-TGCGCAGCTC GCCTATCAA GAGATGCGCAAGC     TCGGTGGCTATCTTC  47 82
LQ332_RS17255 3751339 .. 3751353 -  -4.2  -3.34222   AGCACTATCGGATAA               GCGG CAATCAT CCGC               AAGATTATTAATCAT  49 37
LQ332_RS17250 3750446 .. 3750458 -  -3.3  -2.87931   CTGATGGCGCAGACA                GCTGC CTA GCATC                GCTAGTGTGATCTGA  41 503
LQ332_RS17220 3744751 .. 3744774 -  -2.4  -3.53811   CTCAGTCGGCTTAAA          CCGCTATGACG AAA CA-CACAGCAG          GCATCTATTCGATAG  50 524
LQ332_RS17200 NONE
LQ332_RS17195 3740143 .. 3740153 -    -4  -3.06796   CGCCAGTTGACCTAA                 TTCA GAG TGAA                 ACTCTTGGCAGTCGA  45 140
LQ332_RS17185 NONE
LQ332_RS17180 3734966 .. 3735000 - -17.1  -5.36441   CGGGGACATAAAAAA     GCCCGGGAACCCTTG TTATG CGGGGGTTCCCGGGC     TTCTCCGGTCCTTGA 100 240
LQ332_RS17165 3731399 .. 3731414 -  -8.2   -4.4767   GGACCCAGCATAAAA              GGCCGC GCGC GCAGCC               ACGATGAGGGATTCC  84 57
        hchA 3730475 .. 3730500 - -13.3  -2.63631   GCAACGCGGACACCA         GCGCGGGCACTG GCT CAGCGCCCG-GC         CAACGCGTCCAGCAG  67 14
LQ332_RS17155 3729504 .. 3729524 -  -5.3  -3.31792   GGAGTACTGGCAGAA            CCCGGACAG CTT CGATCCGGA            TCGCTGGTTGCCCGA  49 281
LQ332_RS17145 3726939 .. 3726951 - -10.5  -3.53811   CTGACTCTGCCGAAA                CGGCG TCG CGCCG                TGTAACTAGTGGGTC  69 345
LQ332_RS17135 3726374 .. 3726408 - -12.8  -2.59431   GGCGTCTACAAGGCA     CTGGGGGGCTGGGG GCAATCA CCGCAGCCGCCCAG     CGTGGCGCAACTGCA  67 86
LQ332_RS17100 3717176 .. 3717186 -  -2.4  -3.26473   TGAAATCACCAGCAA                 CGAC ATG GGCG                 TGATGCTCAGGCTGG  45 264
LQ332_RS17090 3715483 .. 3715502 - -11.4  -4.41494   CAGCCGGAACGAAAA            TGCCGCCC TTGC AGGCGGCA             TTTTCTGTAGGTGCC  90 179
         upp 3706518 .. 3706530 -  -2.6  -2.94045   CCACGTGAAGAATCA                CGCG TCGGC CACG                CCCGCATCCACGGGC  41 129
LQ332_RS17050 3706082 .. 3706102 - -18.3  -3.17075   CCTGGGGTAATGGAA            TGGCCGGGC AGT GCCCGGCCA            TCCATGGGTGTGTCG  89 77
        htpG 3698686 .. 3698726 - -11.8  -2.66316   GCCGCTACCAGAGCA TCGCC-GGGTAG-GCCGGGC CAT GCCCGGCGCCACCCTGTCGG TCAGGCCGACAGTTC  65 26
        ftsY 3696790 .. 3696813 -  -8.8  -2.87132   TGGGTGTTCCAGAGA          GGCAGCCACCC ATG GGGTGGC-GCT          ACCAGATATCAGTAG  55 70
        mutY NONE
LQ332_RS16995 3694935 .. 3694952 -  -4.7  -4.21908   CAGCAGCACCGAAAA             GCTCGGC CTGT ACCGCGC              CCATGCTGGCGCGCC  66 449
LQ332_RS16940 3687270 .. 3687291 - -10.1  -3.06696   GCGTGGGCGAAGACA           TCCGGGTGG CCAT CCACCCGCA            GGGCCTGCATTTCTT  59 172
         zwf NONE
         glk NONE
         pgl 3682714 .. 3682734 - -12.5  -3.12351   GGTGGCGAGAGGCAA            GCGGCGGCA GGG CACCGCCGC            CGACGTCAATCAGCC  69 31
         edd 3680605 .. 3680640 -  -6.7  -3.72893   GAGGGCGCCATGAAA    CCGTCC-GGAGGCGGC GGCTA GCCCCCGCCAGGACCG    TTCGCGCCATGGATG  62 150
         eda 3679521 .. 3679551 -  -7.4   -4.4767   GGATCCACGACAAAA       TCGCACTGGCGCGC ATG GCCAGCCAGTACGG       CCTGGTAGATCCGGC  79 348
LQ332_RS16890 NONE
LQ332_RS16885 NONE
LQ332_RS16845 3667674 .. 3667690 - -10.8  -4.89567   CCGGAAAACAGAAAA              GCCCGC ACGAG GCGGGC              TTTTTCGGTTCCTGC 100 50
LQ332_RS16835 3665506 .. 3665523 - -14.1   -4.4267   CCGGAAAACGCAAAA             GGGCGCC CAAG GGCGCCC              TTTTCGTTGCTGCAA 100 51
LQ332_RS16820 3663164 .. 3663181 -  -3.3  -3.77206   GACAATTGCATGAAA             CGCCACG CGCC CGTGAGG              GATGCGCGAAAAATC  54 51
LQ332_RS16815 3662582 .. 3662613 -  -3.8  -4.71061   ACGGACAGGGAAAAA     CCACCACGGCCTGC TGCGGG GCAGG--GTGATGG      CAGACACAGTAGGCA  75 48
LQ332_RS16810 NONE
LQ332_RS16805 NONE
LQ332_RS16800 3659913 .. 3659953 - -21.3  -3.28924   GATGCCTTGGTAGAA  GGGGTCAGACCCCTTTTTC GCA GGAAAAGGGACCTGACCCC  CAGAGCGCGGCCCTC 100 39
        thiD NONE
LQ332_RS16790 3658112 .. 3658136 -  -5.5  -2.55015   ACTCTATCCAACTGA          GCTACGGGCGC CCT GCGACAGGAGC          GGAATTATGCGGATG  45 2
LQ332_RS16785 3658014 .. 3658036 -  -4.2   -2.9587   TCAAATTTTAAAGCA           TTTCCAGC GGCGGAT GCTGAAAA           CCTGTCGAGTGGTGC  44 35
LQ332_RS16780 NONE
LQ332_RS16775 3657771 .. 3657790 - -13.6  -5.77988   ACACACATAAAAAAA            CAGCAGGC CGAG GCCTGCTG             TTTCGGTGTAATGGT 100 37
LQ332_RS16765 3655258 .. 3655289 - -15.1  -3.09516   CGGTGCAGCACGTAA      GCGCCCGCGATGC ACGGAG GCACCGCGGGCGT       TGTGGTTACAGCGGC  80 31
LQ332_RS16755 3652725 .. 3652749 -  -3.4   -3.6682   CCGGACGGACTGAAA          GCGCAGGCGA TGGCG TCGTACGCGC          GCTGGCGCTATGGCG  51 469
LQ332_RS16745 NONE
LQ332_RS16740 3649476 .. 3649496 -  -5.4  -2.72344   CGGCAGCGCCAATGA            CATCGGCA TGACG TGACGATG            CAGGAATCGTGTTGT  44 67
LQ332_RS16735 NONE
LQ332_RS16730 3644894 .. 3644911 - -12.7  -2.82623   CCGGGGCGAGAAGCA             GCCGAGC GTGG GCTCGGC              TCTACAGGGGATTCC  69 41
LQ332_RS16705 3637979 .. 3637991 -  -2.6  -3.29144   CCACCGGGGCGACAA                CACC GGCAG GGCG                CACAGCACTGGAGTG  44 211
        aceE 3635148 .. 3635160 -  -9.1  -3.28416   GATGACCGAGACCAA                GGCGT TCT ACGCC                CACGACGGTACACCG  59 126
LQ332_RS16690 3632174 .. 3632202 - -17.5  -4.18674   GCCAGATACAAAGAA        GCGCCTGCAGATC CTC GATCTGCAGGCGT        TTTTCTTTATGGCCG 100 45
        yhbY NONE
LQ332_RS16600 3615793 .. 3615810 -    -7  -2.52464   GGCGCCTCGAATTCA             GCCTTC CAGGAT GAAGGC              GGCGGCGACCTTGCG  47 5
LQ332_RS16570 3610787 .. 3610801 -  -8.5  -2.56164   GGTTGAAGCAGGAAC               GGCGC GCGCT GCGCC               TGCGCCCGGCATTGC  51 283
        parE 3601126 .. 3601184 - -38.5  -3.15579   CCAAGGGCGCATGAA CCGGTAGTGCCGGCCGCTGGCCGGCA GTCGAGGT TGCCGGCCAGCGGCCGGCACTACCG- GGCAACCGGGTCAGA 100 80
LQ332_RS16515 3600427 .. 3600458 -  -7.1  -3.54424   CCGTATGTGTCCAAA      GGCATGGCGTGGC GTTGTG GCCACGACTGGCC       AGATTGGGTCAAGCC  57 34
LQ332_RS16510 3598577 .. 3598597 - -19.7   -5.1925   CGACAATCGAAAAAA            GCCCGCCGG ATT CCGGCGGGC            TTTTTTCATGGTCGA 100 288
LQ332_RS16495 NONE
LQ332_RS16490 3594468 .. 3594497 - -12.9  -3.59262   CGGCAGACCTGGAAA       CGTAGCAGCCGGCC AGC GGCCGGCT-CTACC       GGGTTCCGGCTCAGA  81 36
LQ332_RS16465 NONE
LQ332_RS16460 NONE
LQ332_RS16435 3584685 .. 3584720 -  -5.3  -3.39803   CACCTACAGCCAGAA    TCC-GCGCGACCTGCC GTCGT GGGAGGACGCGGTGGA    CCAGGGCCAGTTGCC  52 369
LQ332_RS16420 NONE
LQ332_RS16415 3581652 .. 3581664 - -10.5  -2.64616   GGTTGATTCACAGCA                GGCGC CAG GCGCC                GCAGGCCAGCAGCGC  58 5
LQ332_RS16400 3580230 .. 3580245 -  -2.5  -2.50816   CTGCCATCGACGAAC              GCC-GG TTCGT CCTGGC              AGGAGCCATCAGCCG  37 103
        crcB NONE
LQ332_RS16380 3576580 .. 3576598 -  -5.9  -3.61398   CTTCCGCTTGAAGAA             CGGGCAA TCCAT TGGCCCG             GATCGGCTGAAGGAC  57 406
LQ332_RS16350 NONE
LQ332_RS16345 3573717 .. 3573731 -  -7.8  -3.21395   ATGGTGCCGAGAACA               CCGGCA CGC TGCCGA               CCGCACGCGTGGTAC  53 186
LQ332_RS16305 3566387 .. 3566433 -   -18  -2.52795   AAGCTGGGCAACTGA GCCTGGGGTCGGATCCCTTTCC GCA GGAAAGGGCTCTGACCCCACGG TTGCTGCCATCCACG  86 127
LQ332_RS16240 3552204 .. 3552227 -  -2.2  -2.53015   ACATGCTGGAAGGCA          CGTTCAAGGC CGTG GCCTGGGTCG           CGATCCTGTGCGTGC  37 163
LQ332_RS16230 3551546 .. 3551563 - -14.1   -3.8901   GTGGAAACGATGAAA             GCCGGCC CCTG GGCCGGC              TTTTTTCGTTCCGAT  88 99
LQ332_RS16210 3548410 .. 3548427 - -12.7  -5.52909   CAAGATGCAAAAAAA             GCCGCGA TGAC TCGCGGC              TTTTTTTTTTGCAGT 100 64
LQ332_RS16150 3533799 .. 3533842 -  -6.7  -3.23899   CCGCAAGGAACTGAA GGGTCGTATCG-GCGAGATC GGCAA GCTCTCGCCCGACACGATCA AGGGCTACGCCACCC  50 403
LQ332_RS16130 NONE
        nadC 3530777 .. 3530819 -   -20  -3.28712   CGCCGGGTGTGAGAA CGCGGTCAGATCCCTTTTCC CAT GAAAAAGGGATCGGACCCCG CGCCGGGCCTCAGCC 100 35
LQ332_RS16120 NONE
LQ332_RS16115 3528781 .. 3528816 -  -9.7  -2.62263   ACTTCTTCCACATGA    CCAGCCACCGCCCGTA CCTGC TGCGGGCGCTGG-TGG    AATGGATCAACGACA  55 503
LQ332_RS16075 3522302 .. 3522319 -  -9.1  -3.53012   TCGGGTGGCGGGAAA             GCGGGCA ATTC TACCCGC              ATCCAGGCGCGTGCG  65 139
        miaB 3520809 .. 3520841 - -19.1  -2.54896   CCTGGATTGAAGGCA      GGGGGTCGGATCCCC GCA GGGGCTCCGATCCCC      TTTACCGGGGACTTA  89 38
LQ332_RS16050 NONE
        ybeY 3515919 .. 3515952 -  -8.7  -3.01712   CGTGGGCTCGGAACA     GAGCCCGACGTCAGC GCTC GCCGGCGTAGGGATC      GGCGATGCCGAGCTC  56 2
LQ332_RS16040 3515236 .. 3515261 -  -6.9  -3.90744   GCCGGGGGCAAACAA         TAGCGCGCCG CGCGGAC CGGCGC-CTA         CGGGCCGGCTGGATC  64 39
LQ332_RS16035 3514596 .. 3514610 -  -2.7  -2.78463   AGGTCTGCCATCATA               GCCGC GGCGA GCGCC               TGAACGGCCCGGTGA  38 6
LQ332_RS16030 3513931 .. 3513952 -  -3.5   -3.3422   CATCTCTGGAAAAAG           GGCACCCGG CAAG CCGGGCGAT            GGCCCAAGTCTAGCA  47 56
LQ332_RS16025 NONE
LQ332_RS16020 NONE
LQ332_RS16015 3510596 .. 3510619 -  -3.9  -3.72576   TTCGGCGGCAGCAAA         CAGT-C-CGGC TTCG GCCGGGAACTG          GCCGACCACGGCATC  55 155
LQ332_RS15960 3496915 .. 3496939 -    -7  -4.07568   GCCCGCCGGTGAAAA          TGCCGTACGC GGGCT GCGGTCGGCA          CGCGGCTTCACCACA  68 33
LQ332_RS15955 3494999 .. 3495032 - -15.3  -3.41982   AAACGCAGTAACCAA     CGATCAGCAGGTGAC AGCC GTCGCCTGCTGGTCG      GCTGTCTGCGGAACG  84 84
LQ332_RS15945 NONE
LQ332_RS15940 3492055 .. 3492103 -  -2.7  -3.05384   GTCGCTGTCATTCAA CCTGGCCGGCATCCTCGGCGCGG CGC CGGCGCCGTACCTGGCCACCTGG CTGGCCGAGCGTTTC  41 129
LQ332_RS15930 3489956 .. 3489990 -  -6.4  -3.86015   CATGCGTTCGACAAA     TACAGCGAGATCAAGG CCA CCTGGATCCAGTTGTA     ACGACGTGGCTGCTT  64 171
LQ332_RS15920 NONE
LQ332_RS15915 NONE
LQ332_RS15910 3484565 .. 3484590 - -14.7  -2.52464   GGTCCCGTCAACGGA         GCACTGCCCGC GCCG GCGGGCAGTCC          TGGGTGGGAGGCAGG  73 154
LQ332_RS15905 NONE
LQ332_RS15900 NONE
LQ332_RS15895 3482113 .. 3482131 -  -8.8  -3.17723   GGATTTCGAACGCAA             CGCGCG CATCCAC CGCGCG             TGGGAACTGAAGCGG  59 111
LQ332_RS15880 3478383 .. 3478423 - -16.1  -4.30014   CCCATCAACCGAAAA  TCGGGTCAGAGCCCGTTGC GTA GCAACGGGATCCGACCCCG  TGTCGATTCGAAGGA 100 307
LQ332_RS15860 NONE
LQ332_RS15855 NONE
         nth 3473450 .. 3473464 -  -5.6  -3.35679   CGTTGCCACCGACAA               GTCCAG CGG CTGGTC               GGTGTGGGGCAGCGT  49 354
        pstS 3470952 .. 3470980 - -16.8  -4.20868   CCCCGAAAAGAAGAA        GAGCGCGAGATC TCGAG GATCTCGCGCCC        GGTTGGGGCCGGCGG 100 84
        pstS 3469576 .. 3469602 - -15.1  -3.61715   TATGGCGTGGAAGAA         GCGGTGCCCGC GCGGG GCGGGCACCGT         CGGGTCCATCACTTC  87 34
        pstC NONE
        pstA NONE
        pstB NONE
        phoU 3466015 .. 3466039 - -17.2  -5.28942   CACCGCAAAGAAAAA          GGCCGCTGTC ACCAG GACAGCGGCC          ACCTTGGAGTCGACT 100 60
LQ332_RS15810 NONE
LQ332_RS15805 NONE
LQ332_RS15800 NONE
LQ332_RS15795 3463201 .. 3463214 -  -5.9  -2.80994   GTGAATTCTAGCAGA               GCGCC CCTG AGCGC                CCGGCTGGCCTGTGG  47 139
         rnt 3462010 .. 3462041 -   -18  -3.01924   CACCCGCCTGGAAGA      GGCCGCACAGCTGT GTGC ACGGCTGCGCGGCC       TGTTCCATGACCACC  82 517
LQ332_RS15770 NONE
LQ332_RS15765 NONE
LQ332_RS15760 3451717 .. 3451763 -  -5.7  -3.32268   GAAGGACCTGCAGAA GCAGGGCGTGTGG-ATCTACGGC CTG GCCGGTGAGGCCAC-CGCCTCGC TGTACCAGCTGGACC  52 280
LQ332_RS15740 3447765 .. 3447782 -  -9.1  -5.83822   CACAGGCAAAAAAAA             TCCCCGC CGAA GCGAGGA              GTTTTTTCGTTGGTG 100 36
LQ332_RS15735 3447471 .. 3447484 -  -9.5  -5.14563   CCGTGCATGAAAAAA               CCCGC TTTC GCGGG                TTTTTCTCATTCTCG 100 44
LQ332_RS15725 NONE
LQ332_RS15720 3445533 .. 3445546 -  -9.5  -5.37593   CCGGAAACGAAAAAA               CCCGC TTTC GCGGG                TTTGATCATCTTGAG 100 44
LQ332_RS15695 NONE
        parC 3437195 .. 3437226 - -23.2  -3.32844   CCCGCCAGCCGACAA      CGAAAAAGCCGGGG AATG CCCCGGCTTTTTCG       TGCCTGACGTCCGTC 100 130
LQ332_RS15680 NONE
LQ332_RS15635 3422677 .. 3422695 -    -3  -3.13403   CGTGCTCCATCAATA             GGTGATCG TGG CGGTAACC             GTATCCAGGTAGTTA  43 1
LQ332_RS15630 3421918 .. 3421932 -  -5.6  -3.14344   CACTGCGCCCATCAA               CGCCTC AGC GAGCCG               GTGGGGGCGACAGTG  49 15
LQ332_RS15625 NONE
LQ332_RS15620 3418389 .. 3418407 -  -7.4   -3.5393   ACCACCGTGCTGAAA             GATATCGC TGC GCGGTATC             GGCCGGATGGGCCGG  60 120
LQ332_RS15615 NONE
LQ332_RS15610 3417420 .. 3417432 - -10.5  -2.78463   ATCCGGTCGATTATA                GCCCG TCG CGGGC                ACGTGCTGCAATCGC  59 8
        rpsB NONE
         tsf 3415333 .. 3415354 - -17.3  -5.60993   GTGGGCACAAAAAAA           GAGCCGCGG TTTC CCGCGGCTC            CTTCTGGTCGCATCA 100 58
LQ332_RS15595 3413552 .. 3413570 -  -3.7  -3.28924   CACTGCGGCGCAGAA             TCCGGAG GTTGG CCCCGGT             CCGTGGGGCGTCCCG  47 42
        pyrH 3412688 .. 3412716 -  -4.3  -3.08438   GATTATAGGCGAATA        CGGGACGCTGCCG GGC CTGAATCGGCCCG        GTTGTCGCTTTGCGC  45 47
         frr 3412065 .. 3412096 -  -3.6  -2.53876   GCGGACGGCAACGGA      GGCGGGACTGAAGGC ATC GACTTCAGAC-CGAC      AGCAGTTCTTTTTCC  39 16
        uppS NONE
LQ332_RS15575 NONE
LQ332_RS15570 NONE
        rseP NONE
        bamA 3405295 .. 3405313 - -17.4  -4.55798   CAGGCCAAACGAAAA             CGCCGGGC AAT GCCCGGCG             CTTCGCACCCCGTCT 100 148
        lpxD NONE
        fabZ NONE
        lpxA 3402652 .. 3402677 -  -4.6  -3.14132   CCCGCTGCGCAGGAA         CGCTGCCGGCC ATCGA GGCCAGCGG-G         ATCACCGCGGCGCCG  47 66
        lpxB NONE
LQ332_RS15535 NONE
        dnaE 3396928 .. 3396957 - -11.3  -4.24002   GCGGAAACGGGAAAA       CCACGGAGCCAGC CTCA GCTGGCCCAGGGG        GGGCTGTAACGCACC  88 10
LQ332_RS15525 3395954 .. 3395997 -  -5.8  -3.55622   CCGAATGCGTGCAAA CCGCCCGTAC-GCCTTCGTCT GGA AGGCGACGGTAGCGCAGGCGG GCAGGGCGCGCCAGT  55 45
LQ332_RS15520 3394864 .. 3394895 - -16.6  -3.55444   CTGTCAGGGCGCAAA      CGAAGGAGCCGGGC AAAT GCCCGGCTCTTTCA       TTTCTGCAATCACCT  91 74
LQ332_RS15510 3393597 .. 3393610 -  -3.9  -4.17048   GTCGGCTGAAAATAA               TGAAT CCGG ATTCA                CATCCGCTCCAGCGC  62 23
        phaZ 3392154 .. 3392201 - -25.8  -3.01712   GGTGCGGTTGTAACA GGCCAAGGGTCGGATCCCTTTCC GTT GGAAAGGGCTCCGACCCCTG-CC GGGAATCAACCCGCT 100 31
LQ332_RS15490 3389446 .. 3389490 -  -4.2  -4.03204   GATCAAAGGCAGAAA CGGTCGCTTCGC-TCGCCGGGC CCG GCCCGGCACTACCAAGC-ATCG TCGTGCAGCTGTGGC  60 296
LQ332_RS15480 NONE
LQ332_RS15475 3386608 .. 3386628 -  -8.9  -3.66018   CGAGCAGGCCAACAA            GGACGCCGC GCA GCAGCGTCG            TCGCATCGATACCCA  63 292
LQ332_RS15460 3383721 .. 3383752 - -19.4  -3.86897   GCGATCCCCCACAAA      CAGATCGGCCCGGG TTTC CCCGGGCCGCTCCG       CTTCATCTCACACCG 100 47
LQ332_RS15455 3382115 .. 3382161 -  -5.6  -3.10894   AGCATTACCAGGGAA GTGGCGTTCCGCGCGAAGGTTG GGG CCGCTTGAACGCGGAACGCCAA TGGCAGGCGCTGGCG  46 494
LQ332_RS15435 NONE
LQ332_RS15430 NONE
LQ332_RS15420 3374671 .. 3374688 -  -3.3  -3.73402   AGACCGTGGATCAAA             TGCTGGC ACGC GCCGACA              AGGCGCTGTACCGGG  55 121
LQ332_RS15385 3365798 .. 3365827 -   -10  -2.53409   TACGAAGCCACCAAT       GCGATCGCCAGC CTGTAC ACCGACGATCGC        CGGCCGGCACGGCTG  55 139
LQ332_RS15360 NONE
LQ332_RS15355 3360227 .. 3360239 -  -5.5  -4.13767   TTTTCCACCGGAAAA                GGGAT CTG ACCCC                GATGCTCAAGCGAAC  66 31
LQ332_RS15350 3358781 .. 3358799 - -17.4  -3.71848   CCGGTCCACGAAGAA             CGCGGCGC CTG GCGCCGCG             TTTTTTTATGCGCGT  93 112
LQ332_RS15335 3355661 .. 3355678 - -14.1  -5.70829   AATACGACAAAAAAA             GGGGGCC TTTC GGCCCCC              TCAGGTAATGTTCCG 100 55
LQ332_RS15330 3355037 .. 3355053 - -12.3  -3.41962   CGGCAAGAGATAAGA              TCCACGC CAT GCGTGGA              TGACTATCTGGAGCG  73 61
LQ332_RS15325 NONE
LQ332_RS15320 NONE
LQ332_RS15315 NONE
LQ332_RS15310 3350276 .. 3350318 - -35.2  -3.55444   CCGGCATTTTGGAAA CGGGGTCAGATCCCTTTGCC AGT GGCAAAGGGATCTGACCCCG TTTCATATCGGTGCG 100 55
        rlmJ NONE
LQ332_RS15265 3340733 .. 3340755 -  -3.2  -3.41602   CCGATTTTAGCAGAA           GCCCGGTCAA CGC CCGTCCGGTC           GTGCCGGCCGCTGGC  47 131
         mfd 3337251 .. 3337261 -  -4.6  -3.14132   CGGGGGGGCGATCAA                 CCCG GGG CGAG                 GGTGGTCAGAAGGGC  47 11
LQ332_RS15255 3336413 .. 3336432 - -16.4  -3.60098   ACGCGTGATGCGAAA            GGCCCGGC GAAT GCCGGGCC             TTTTGTCTTCCAGGC  91 177
         nfi 3332531 .. 3332568 -   -12  -4.41047   ATCGTTGAATGAAAA   TGAAGG-CCGCACCGGG GAATG CCCGGTGCGGTCATTCG   TCGCGTCGCGAGGCC  95 19
LQ332_RS15230 3330105 .. 3330134 -  -3.6  -3.82084   CGCCAACATCAACAA      TGATCCGC-GCTGC ACCG GCAGCTGCG-ATCC       CTCGATCGCGCTGCA  58 279
LQ332_RS15220 3326324 .. 3326345 -  -2.9  -4.11216   TTCCGACGGCGAAAA           GCT-CCGCGC TGC GCGCGATAGT           CGACTGGCAGTCGAC  60 70
LQ332_RS15210 3324470 .. 3324482 -  -4.7   -2.7644   AGGGAAGGGCGAAAG                CGCGG CAT CGGCG                GCATCCAGCGGCGGA  44 94
LQ332_RS15205 NONE
LQ332_RS15200 NONE
LQ332_RS15195 NONE
LQ332_RS15190 NONE
LQ332_RS15185 3319877 .. 3319891 -  -2.7  -3.02649   AGCCGATCACATACA               GGCGC CTCAT GAGCC               GGCCCCTACCACCGC  41 17
LQ332_RS15180 NONE
LQ332_RS15175 3318193 .. 3318207 - -11.4  -3.53012   CCTTTCCTGTTGAAA               GCCTGC ACC GCAGGC               GGGGGAAAGTGTTCA  72 87
LQ332_RS15170 NONE
LQ332_RS15165 NONE
LQ332_RS15160 NONE
LQ332_RS15155 3313868 .. 3313898 -  -8.8  -3.61398   TGCGCCCGGGAACAA       CGAGGCTGCCGGCC AGC GGCCGGCACTACCG       GAGCTACGCTGGCCA  65 64
LQ332_RS15150 NONE
LQ332_RS15145 NONE
         map NONE
LQ332_RS15125 NONE
LQ332_RS15120 3308253 .. 3308283 -  -2.3  -2.60555   GAAGCGGAGAAGCCA       GCCTGGCCGGGGC TCAGT GCTGGGGCCATGC       GAACAGCACGCTCAT  38 8
LQ332_RS15115 NONE
LQ332_RS15110 3305651 .. 3305672 -  -7.1  -2.71364   GGACGCGCGCAATGA           GGCGGCGGG GCAA CAGGCCGCC            AATGCCGCAGTGGAG  49 329
LQ332_RS15085 NONE
LQ332_RS15080 3298540 .. 3298560 - -11.8  -5.86609   CGAAAAAAATAAAAA            GCCCCCGA GTCAT CCGGGGGC            GGGGGCTTAATGAGG 100 110
LQ332_RS15075 NONE
LQ332_RS15070 3295892 .. 3295905 -  -9.5  -4.24342   CTCGCCACGAACAAA               GGCCC CGAA GGGCC                CTTGCCGAGATACGA  81 69
LQ332_RS15065 NONE
LQ332_RS15060 3293951 .. 3293974 - -13.8  -2.56596   TCGGTGAGTAACGCA          GGGTTGCGGC GGAA GCCGCAGCCC           ATGGCTTTTCCCTCT  70 166
LQ332_RS15010 3278752 .. 3278768 -  -2.2  -3.90744   TCCGCTTGCAAACAA              CGCC TTCAAACCT GGCG              CTGGCTGGCACACGG  56 111
LQ332_RS14950 3270951 .. 3270968 -  -4.8  -2.71134   TCAAAGCAAGAATAC             CCTCCC GTTATG AGGAGG              TCTCTGGTTACGAGC  43 139
LQ332_RS14925 NONE
LQ332_RS14920 3266323 .. 3266336 -  -6.7  -3.01712   TCCCCTTCCGCAATA               GTGAC GCGG GTCAC                ATTTGGAGGCAAGTC  50 89
LQ332_RS14915 3263515 .. 3263526 -  -4.4  -3.55444   TGGTGATTCGGGAAA                TGAC GGGC GTCA                 AGGACGCCGAAGAGT  51 157
LQ332_RS14875 NONE
LQ332_RS14870 3258807 .. 3258817 -  -4.6  -3.53563   AGAGTGGCTGCTAAA                 CGCC TAC GACG                 GCCTTCCTTGGTGCA  53 53
LQ332_RS14840 3250991 .. 3251010 -  -6.4  -3.76125   GGACGTCAACTTAAA            CGGGGT CGAGTCTT ACCCCG             TGGCCGATCGCTTGG  61 241
LQ332_RS14830 NONE
LQ332_RS14825 3248902 .. 3248924 -  -4.9  -3.57792   TGATCGAGCTGCAAA          GCGGGACGATC ATG GATCG-CC-GC          TTGCCTTATTGGCCT  54 236
LQ332_RS14815 3247403 .. 3247418 -  -6.8  -4.10188   GAGACGGAGAAACAA              GCCGTGG CCC CC-CGGC              AAGGCGGTGTGCGGG  66 273
LQ332_RS14795 3243556 .. 3243573 -  -6.9  -2.52676   CAGTGGGGCAAGGCA             TCGCCCC TACT GGGTCGA              CTGATGTTGCCAGAA  47 14
LQ332_RS14790 3242470 .. 3242493 -  -8.1  -2.72661   TACCACTGCGAATGA          GGCTGGGCA TACTTC TGCCCATCC           CTTGTTCCTCGGAAT  51 82
        mutS 3219092 .. 3219102 -  -3.2  -2.94202   GATGAAATGAATAAT                 CGAA TGA TCCG                 TTCAGTCTGATAGTT  42 131
LQ332_RS14670 3217322 .. 3217355 - -18.2  -4.11216   TGCGGACCGTTAAAA     CGGCGACGCCGCCCC ACGGG GAGGCGGCGT-GCCG     TACGCGGGGTGGGCG 100 42
LQ332_RS14665 3216515 .. 3216541 -   -15  -3.01791   ACGCCGTGCCGAACA         GCGCGCGCTGCG CAT CGCGGCGCGCGA         TGGTTTCCAGCCGCC  74 146
LQ332_RS14650 3214320 .. 3214352 - -13.3   -3.9461   CGCGGCGAAGAAGAA      GCGGTAGAGCCGGCC GCT GGCCGGCTGTTACGC      GATGCTTCCGGAGAG  89 117
        ccsA 3205960 .. 3205973 -  -3.7  -3.54424   CGTTACCGCTGGAAA               GAGGC GTCG GCCAC                CGCGGGCCAGGTCGA  51 259
LQ332_RS14570 3197398 .. 3197415 - -14.1  -3.91897   GTTGCCACGCAGAAA             GGCCGCC CTCG GGCGGCC              TTTTTGTTGGCGGGT  88 252
LQ332_RS14545 NONE
LQ332_RS14540 3191935 .. 3191955 -  -8.1  -4.26076   CCAGTTGCATGAAAA            GCCCCGGCC TTT GGTTGGGGC            TTTTTGTCTGCGCCC  75 88
LQ332_RS14505 NONE
LQ332_RS14500 NONE
LQ332_RS14495 NONE
LQ332_RS14490 NONE
LQ332_RS14485 3174336 .. 3174394 - -21.5  -2.71995   GAAATAGCAAAAAGG GGACGGAGGGGATTAAGTCGTTTACAGCA CCG TGGCGTAAACGACTTAATCCCCTCCGT-- CCCCTTTTTTTGGGG 100 47
        rpsT 3164193 .. 3164208 - -11.8   -5.4833   GCAGGCAACAAAAAA              CCCGGC CGAG GCCGGG               TTCTTGTCTGCTGCC 100 72
        uvrA NONE
LQ332_RS14420 3158460 .. 3158473 -  -2.3  -3.14463   AAGCGTGCCGACCAA               GGTCG GCAC CTACC                AGGGTGTGTCAGGTA  42 34
LQ332_RS14415 3157504 .. 3157534 -  -8.8  -2.60075   GCGCGCTGAAGGAAG       GCCAGGCGCTGCCG CTG CGGCTGCAGCTGGA       GGGCGGTGCTGAAGC  51 150
LQ332_RS14405 3156224 .. 3156271 -  -8.2  -2.78596   GAGGGCCTGATTATA CCGGTCAGGGCGGCGGCCCCATC TTC GGTAGTGCCGGC-CGCTGGCCGG CAACCTCATGATCCT  53 83
        tesB NONE
LQ332_RS14395 3154667 .. 3154723 - -44.3  -5.31275   CCTCACGACAAAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GCC ACAAACGACTTAATCCCCTCCGTCCCC TTTTTGCAGTTGCCG 100 66
LQ332_RS14390 3153303 .. 3153340 - -23.7  -3.09933   GGTCAATGCAGTGAA   TGAC-GACAACGCCGGCA GAG TGCCGGCGTTGTCCGTCA   TACGTTTCCGCTGCG 100 23
LQ332_RS14380 NONE
LQ332_RS14375 3150457 .. 3150513 - -44.3  -4.81249   CCGTAAACCGAAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GCC ACAAACGACTTAATCCCCTCCGTCCCC TTTTTCCACCGTGCA 100 73
LQ332_RS14365 NONE
LQ332_RS14360 NONE
LQ332_RS14355 NONE
LQ332_RS14350 NONE
LQ332_RS14345 NONE
LQ332_RS14320 NONE
        minC NONE
        minD NONE
        minE NONE
LQ332_RS14300 3139416 .. 3139449 -  -6.5  -4.18018   CGCGCCGAGTGAAAA     GAGGGGCGCCGCG AGGTCCGA CGCGTCGCCACGC      GCCCGTGGCCAACCG  68 52
LQ332_RS14280 NONE
LQ332_RS14275 3129539 .. 3129549 -  -4.6  -3.40899   AAGCCTGTACTACAA                 GACC GAA GGCC                 ACGGCTTCTACACCG  52 207
LQ332_RS14260 3125626 .. 3125683 -  -2.6  -3.05384   CCGTTTTTGATGCAA CGCAGCATCCGACCTTTCGCGGC-CCGTC GCC GACAGTGGCGGGCAAGGCCAG--GCAGCG CCCGAGTCAGACCCG  42 185
         mqo 3123746 .. 3123765 -   -15  -3.89215   CCGCACAAACGCAAA            CGGCCACC CGAA GGTGGCCG             CCTGCCTGCTTCACG  91 55
LQ332_RS14250 3121219 .. 3121248 - -10.6  -4.26903   TGCAGTGCAGCAAAA       GGAAGGGCCCGC ACGGAG GCGGGCCCATTC        GGGTAGCCCACGACC  86 110
        mdcA NONE
        mdcC NONE
LQ332_RS14235 NONE
        mdcE NONE
        mdcG NONE
        mdcB 3116060 .. 3116078 -  -3.1  -2.63596   GTCCAGGGCAGAGCA             GGGCA AGGCTCATG TGCCC             TCCTGCTGCAGCAGG  39 16
        mdcH 3115062 .. 3115072 -  -6.8  -2.87132   GCGCCCTCCCAGACA                 CGTG ACT CACG                 TACAGCGCGGATGGA  49 105
LQ332_RS14210 NONE
LQ332_RS14205 3112656 .. 3112686 -  -5.4  -3.37499   CAACAGCCCAACCAA      GGCCA-CGTCCCGG TAGTG CCGGC-CGCTGGCC      GGCAACCACATCCCC  51 242
LQ332_RS14195 3110366 .. 3110390 -  -7.8  -2.52464   GGTGGGTGGAACGCA         GCGGCTGG-GC AGCA GCGCCAGGCGC          GATGATCGCGCTGGT  48 112
LQ332_RS14165 3104512 .. 3104526 - -11.4  -3.53444   TGACTCCTTGGGAAA               GCACGC GGG GCGTGC               GGGATGGACGCCGCC  72 86
LQ332_RS14160 NONE
LQ332_RS14155 NONE
LQ332_RS14150 3102357 .. 3102389 -  -5.3  -3.05384   TGGCCGGTCAGGGAA      CGGGTAGTGCCGGCC GCT GGCCGGCAACCTCAG      GAAGAAGGCAATGCA  47 22
LQ332_RS14145 3101144 .. 3101164 -  -5.4  -3.29144   GCAGGTGCTGGAGAA           CAGC-CACC TGCA GGTGCGCCG            TGGCGACGCGGCGCT  49 461
LQ332_RS14110 NONE
LQ332_RS14105 3095120 .. 3095131 -  -3.6  -2.79023   CAAGGCGATCAACGA                CGGC CATG GCCA                 TGATGCGGGCGACCA  40 392
LQ332_RS14080 NONE
LQ332_RS14075 NONE
LQ332_RS14070 NONE
LQ332_RS14065 3085807 .. 3085837 -  -2.4  -2.60723   GGATGTCCAAGCAAG       GCTCCTTTGCGG GTCAGCG CCGCGCACGAGC       GGGCTGGCTGAGGGT  38 8
LQ332_RS14060 3085162 .. 3085188 -  -7.3  -3.83568   CGACAGCTACAACAA        CCCGACCTATGCC AAT GGC-CAGG-CGGG        CTCCATCTACAAGCA  67 330
LQ332_RS14020 3077591 .. 3077615 -    -2  -3.53811   GTCATGGGGGGGAAA         TCCC-GCCGTC GCGC GTTGGCAGGGA          CAGCGTCCTGCGCGG  47 42
LQ332_RS14015 NONE
LQ332_RS14010 3072899 .. 3072919 - -16.9  -2.57132   GCTGTCGTGGACAAT            GTGCCGAGC ATG GCTCGGCAC            TACAGTAGGGCGAGC  81 110
LQ332_RS13980 3064103 .. 3064134 -  -2.9  -2.70932   TCTTCGCGGGAATCA      CCCTGCATACG TATTCAATGG CGTCGGCAGGG       ATGTAATCGCTTTCA  40 124
LQ332_RS13975 3061084 .. 3061113 - -18.7  -4.19817   GGCATCCACGCAAAA       GAAAACCCGCTGC CTGC GCAGCGGGTTTCC        GGTCCTGCTCCCTTT 100 137
LQ332_RS13965 3058037 .. 3058094 - -11.1  -2.91395   AGCGTTTCGAGAAAC GCTGATCGGTACAGCGGTAGTGCCGGCC GCT GGCCGGCATTCCCGTGGCATCGG-CAGC CTCAGGAGGTTGCCG  64 93
LQ332_RS13955 3056426 .. 3056460 - -12.9  -3.06796   TTGCACTGGATCGAA    CGCGGGTAGTGCCGGCC GCT GGCCGGCA--ACCTGCG    GAGAAACTCATCCGC  72 87
LQ332_RS13930 3049366 .. 3049403 -   -10  -3.07935   AGGGGACGGAGGGAA   TTAAGTCGCTTTTGCC CCATGT GCCATAAGCGACTTAA    TTCCCTCCGTCCCCT  63 53
LQ332_RS13925 3047919 .. 3047929 -  -2.4  -3.21276   GGCTGCTGGACAAGA                 CCCG CTA CGGC                 TTCAACAGCCGTTTT  43 516
LQ332_RS13915 3047007 .. 3047028 - -17.3  -6.06723   GCGCGCAAAAAAAAA           CGGGACGGC CAGA GCCGTCCCG            TCGGAATCCGCGTCG 100 50
LQ332_RS13910 NONE
LQ332_RS13905 NONE
LQ332_RS13900 3044873 .. 3044892 -  -7.8  -3.13403   GGCTGCTGATCAACA            GCGGCC TGGCCGAT GGCCGC             GAGCTGACCTCCTGG  53 295
LQ332_RS13885 3043267 .. 3043280 -  -6.7  -2.67515   TGGATCAGGAGACGA               CATCG ACAG CGATG                GTGCGGCGCTGTTCG  48 1
        sufB NONE
        sufC 3040916 .. 3040935 -  -3.4   -2.8507   CCATCGAATCAAGCA            GGGCGCTC ATCA GACCGCCG             CCTCGGGCACGACCC  41 15
        sufD NONE
LQ332_RS13865 3038360 .. 3038379 -   -15   -5.4505   GTGCGCAATAAAAAA            CGCCGCAG TTTC CTGCGGCG             TTCTCATACTTCCCT 100 56
LQ332_RS13840 NONE
LQ332_RS13835 3029858 .. 3029871 -  -2.3  -2.93215   CATAAACGATAATGA               TTCGC ATAT GCGCA                ATTGGGTTAGAGGTG  41 129
LQ332_RS13830 3029366 .. 3029398 -  -6.1  -3.30701   TGGCAGGAAACGCAA      TCAGGCGCACGGCAA CGG CCGCAGGGCGCCTCA      GCTGGCGTGCGGTGC  53 23
LQ332_RS13825 3026914 .. 3026937 - -19.6  -5.27335   CGCCGGAAACAAAAA          CGGCGGCAGG AGAA CCTGCCGCCG           TGGTGGAACGAAGCT 100 44
LQ332_RS13820 NONE
LQ332_RS13815 3025455 .. 3025471 -  -3.6  -3.59583   AGAATGATTGCCAAA              GTGTCG CAGGC CGGCAC              GGCCAGGCTCAGACT  51 34
LQ332_RS13810 3024862 .. 3024895 -    -3  -3.18264   GGCGGCAGGGATGAA    GCAGGCAGCGG-CGCG CGGG CACGACCGC-GCAGGC     GGTCACGCGGGCCGT  45 44
LQ332_RS13805 3022305 .. 3022329 - -12.2  -3.14564   CCATGCGTGGATGAA         GCGGTGCCGAC CAGG GTCGGCACC-C          ACCGGGGCAGGGCGC  69 46
LQ332_RS13800 NONE
LQ332_RS13795 3020895 .. 3020935 - -12.5  -3.59979   CCTTTCCAGCGGAAA  GGGCTCTGACCCCGAGG GATAGGG CGATGGGGTCAGAGCCC  TTCCTGCGGAAGGGA  77 61
LQ332_RS13790 NONE
LQ332_RS13785 NONE
LQ332_RS13780 3017390 .. 3017406 - -12.3  -2.78463   ACGCCGTTCAGTAGA              TCCACGC CAT GCGTGGA              TGGGGCAACCTCAGT  65 36
LQ332_RS13755 3012430 .. 3012477 -  -4.7  -3.16881   GACGCAGCCTAGCAA GGCCA-GGCTGCGTCCGTCACCG GTGC CGG-GTCAGCAGCAGCCGTGGTC GCCGTGGCGGGTACC  47 8
LQ332_RS13750 NONE
LQ332_RS13745 NONE
LQ332_RS13740 3010110 .. 3010128 -  -2.2  -3.17763   TCGACACCCGAGCAA             GCGCAGCG AAG CGACCCGC             TTTTGCTTTTCTTTC  44 221
        purM NONE
LQ332_RS13715 NONE
LQ332_RS13710 NONE
LQ332_RS13705 NONE
        purN NONE
LQ332_RS13695 NONE
LQ332_RS13690 3001718 .. 3001735 - -14.1  -5.23396   AAGAAGTAAGAAAAA             CGCCCGC GAAA GCGGGCG              TTTTCTTTGCGCGGT 100 89
LQ332_RS13670 NONE
LQ332_RS13665 NONE
        lptC 2997564 .. 2997575 -  -7.2  -3.53012   GGGGCCGCCCGGAAA                CCCG GGGG CGGG                 TGGGGGAGCTGCCTT  57 81
        lptA NONE
        lptB 2996250 .. 2996267 -  -4.1  -3.28712   CGCCTGCGGTCACAA             CTTGAAG GAAT CCCCAAG              GTAGACGCGACGTAC  47 2
LQ332_RS13645 2994758 .. 2994781 -  -9.4  -2.60392   GATGTGCCAATGAAC          CTCTCCGCCG GGCG CGGCGGCGCG           TCAAGCGATTCTGAC  55 26
        raiA NONE
LQ332_RS13635 NONE
        hprK 2992988 .. 2992998 -  -2.4  -2.73364   GGGGCAGGGGAATCA                 GGGG GTG CGCC                 GTTCCAGCAGGTTGC  38 12
        rapZ 2991802 .. 2991833 -  -2.2  -3.55444   TTTCGAGGCCTGAAA      GCGATTCATCCACGC ATG GCGTGGATCCA-CGT      GTCGACCAAGGTCGA  47 265
LQ332_RS13620 NONE
LQ332_RS13615 NONE
        ptsP 2989032 .. 2989056 -  -8.6  -4.77165   CGCGGGATAAGAAAA         GCCGCGATCCC GGCA AGGAT-GCGGC          AACAGGGGTGTTCAG  91 204
        mgtE NONE
LQ332_RS13600 2987217 .. 2987233 -  -4.4  -3.28791   ATCGGCGTTCCAGAA             GCGG-TG GGTT CAGCCGC              ATCGTAGTCCGCGCA  47 66
LQ332_RS13595 2986335 .. 2986388 - -18.3  -2.87344   CAGGGCGGGCAGATA GTGCCCAACCAAGGTTGGCACCCACC GAA AGCAGGTTCCAACCTTGGT-GGGCAA CCACCGGACGTCGTG  89 43
LQ332_RS13590 2985888 .. 2985906 -    -8  -2.52464   GCGGCGTGGAAGTCA             CCGACGAC GTG GCCGACGG             CCCGCAGTCGTGGGT  48 205
LQ332_RS13570 NONE
LQ332_RS13555 2981094 .. 2981111 -  -7.7  -3.61398   CTGGCGCCGGAAGAA             CTGCAGCG CAT CGC-GCAG             GCGCTGGACGAGGTG  60 137
LQ332_RS13530 NONE
        proC 2975144 .. 2975166 - -13.4  -2.72344   GCTGACCTGCAACGA           CGGCTTCGCG CTG CGCGAAGCTG           CGGTGGCCGGGGCGG  67 296
LQ332_RS13515 2973724 .. 2973779 - -31.4  -5.26875   CTGGGAATGAAAAAA GGGGACGGAGGGGATTAAGTCGCAAG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTTTCTTACCAGA 100 33
LQ332_RS13505 2971825 .. 2971842 - -12.7  -3.54424   CGGCACTGCCGTAAA             GCGGGTG CCTA CACCCGC              CGCGCGATCATCGCG  78 16
LQ332_RS13490 2968101 .. 2968115 - -12.8  -3.53012   CGGCCCTGGCTGAAA               CGCCCG GCG CGGGCG               GGGCGCAGCGGCATG  78 85
LQ332_RS13480 NONE
LQ332_RS13470 2962893 .. 2962915 - -14.8  -2.59431   GCGCGGGACAACTGA           CAGCCGCCGC GAT GCGGCCGCTG           GCCGGCTCAACGCAA  74 32
LQ332_RS13460 2961175 .. 2961193 -    -3  -2.52464   GCGGTTGGCAAGGGA             CATGAGCG GTA CGGTCAGG             GGGGAGTGGGGTGCA  39 21
LQ332_RS13455 2960013 .. 2960025 -  -3.3   -3.1505   ACGATTGCGGATGAA                GCTGC GGC GCAGG                CGGCGCTGATGCCCT  43 44
LQ332_RS13425 2952336 .. 2952352 -  -7.9  -2.64218   AGGGGGTATCAGAAG              GGACCCG CTT CGTGTCC              GGCGAAGCTGAGCTT  50 2
LQ332_RS13420 NONE
LQ332_RS13415 2951275 .. 2951287 -  -4.1  -2.78384   GTCTTCCGCATCAGA                TCACA CCG CGTGA                AAGCAACTGTTCCAG  42 8
LQ332_RS13410 2950696 .. 2950715 - -12.1  -4.98531   CCCTGAAACGAAAAA            GCCCCGG ACAATG CCGGGGC             TTCAGGACTGCAGCA 100 50
LQ332_RS13405 NONE
LQ332_RS13400 NONE
LQ332_RS13395 NONE
LQ332_RS13390 NONE
LQ332_RS13385 NONE
LQ332_RS13380 NONE
LQ332_RS13375 2946886 .. 2946902 -  -2.2  -3.06183   GCCACGGTTAGCGAA              CCTCGA TTCCT TCGATG              GTGATGGCCTCGCCG  42 1
LQ332_RS13370 2945846 .. 2945899 -  -8.7  -3.11192   CACAGCATCAGGCAA GCGCTGCCGCCCTTGCTCGTCGATGC GGT ACACCGCCT-GCAAGGTCGCCAGTGC ACCCCCGGGATGACG  57 105
LQ332_RS13365 NONE
LQ332_RS13360 NONE
LQ332_RS13355 NONE
LQ332_RS13350 2941843 .. 2941855 -  -3.3  -2.53271   CCATGCTTAGAAGAT                CTCCG AGA CGTAG                TTGTTATTCATGTGC  39 4
LQ332_RS13345 NONE
LQ332_RS13340 NONE
LQ332_RS13335 NONE
LQ332_RS13330 NONE
LQ332_RS13325 NONE
LQ332_RS13320 2936611 .. 2936632 -  -9.5  -4.09685   GTTGATGCGGGAAAA           GCATCCACGC ATG GCGTGGAT-C           TACACTTCGCTGCCG  76 25
LQ332_RS13310 2935237 .. 2935247 -  -2.4  -2.79183   TGTAGCGGGAGCACA                 TCCG GGC CGGT                 CAGGCATCGCCGCTG  40 25
LQ332_RS13305 2934564 .. 2934581 -  -6.9  -4.12296   TGCAGAACGAAAGAA             GCCTCCA GCAA TGGGGGC              TTTTTTGTTGCCTGC  68 75
LQ332_RS13230 2922180 .. 2922190 -  -2.4  -3.14463   AACGCTGGCGATCAA                 GGGC TGG GCCT                 TCAAGGATGGCGTCG  43 328
LQ332_RS13220 NONE
LQ332_RS13215 NONE
LQ332_RS13210 NONE
LQ332_RS13205 2916153 .. 2916168 - -11.8  -5.53991   CACGGATGAAAAAAA              GCCGCC CGAA GGCGGC               CTTTTCCGATCACGC 100 60
LQ332_RS13180 2912365 .. 2912382 - -11.3  -4.73108   CCCAGAAAAGCAAAA             CCCCTGA TTTC TCAGGGG              TTTGCAGAGTCTGGC 100 37
LQ332_RS13175 2910403 .. 2910432 - -13.5  -3.60525   TGCATTGATAGACAA       GCGAAGGCCCCGG CGAG CCGGGGCTTTAGC        CACCTTTGGTTTCGC  81 483
LQ332_RS13165 NONE
LQ332_RS13160 2907173 .. 2907203 -  -8.2  -3.53444   TTATCCCTGCTTAAA       TCAAGCCGTTAGTC AAA GTCTAGCGGCTTGG       TTGCTAGTAAGATCC  62 3
LQ332_RS13145 2904941 .. 2904951 -  -3.2  -2.52795   AAGTGCTGCAATGTA                 GGCT TCA AACC                 AAAAATCTTTCTGAC  39 359
LQ332_RS13105 2895662 .. 2895672 -  -6.8  -3.11272   GATCATCATCCAAGA                 GGCA ATG TGCC                 TGAAGGGCATAGCAG  51 75
LQ332_RS13085 2892166 .. 2892200 -  -3.5  -3.01712   GCCTTGGCCGCAACA    GCCA-GCTGTCGATGT TCGT ACAGGGCCAGCATGGC     GACGGCCGCCGCGAT  43 132
         ffs 2880219 .. 2880274 - -10.4  -3.90922   ATGCCGGGCAAAGAA TGCGAAGCCGGGGTCAGAGCCCCTTGC CAT GCAAAGGGATCAGACCCCAG-TGCAGA AAAGGCGATGGCCCC  75 36
LQ332_RS13055 2876876 .. 2876933 - -23.8  -2.83164   CGATGGATCAGTAGA TCCACGCCATGCGTGGATGCTGTTCCTGC CGA GCTGGA-C--CATCCACGCATGGCGTGGA TCTACCCGTTTCATT 100 512
LQ332_RS13040 2875027 .. 2875051 -  -8.5  -3.70149   CCCACAGTACGGAAA          GATCACCGACC GCT GCACGGTGATC          GATACCCTGGTGATG  67 515
        gloB NONE
LQ332_RS13015 2871560 .. 2871577 - -12.7   -5.4833   GCAGGCAAGAAAAAA             GCCGAGC GTGG GCTCGGC              TCTACACGGGAGGCG 100 54
LQ332_RS12915 2858725 .. 2858748 -   -16    -5.626   GACTCTACAAAAAAA          GCCGCGACCC TTGC GGATCGCGGC           CTGTCGTTTACGGCG 100 50
LQ332_RS12910 2858053 .. 2858068 -  -4.6  -3.53444   GGATTGCCCCGCAAA              GGGCTG GGAT CAGGCC               GGGCGGAACATGCGG  53 19
LQ332_RS12895 2854786 .. 2854800 -  -3.4  -4.11216   CGGCCAGCCGGAAAA               CGCCGA GCG CCTGCG               CAAGGCCATCGTGGC  63 219
LQ332_RS12875 NONE
        phoB 2850251 .. 2850290 - -18.7  -2.85668   GAGGGTTATAGCAGA GTTGCCGGCACCG-GCACC CGCA GGTGCACGGCGCCGGCA-C  GACGAGACTCAGGTG  89 34
        phoR NONE
        ppk1 2846600 .. 2846639 -  -2.2  -2.70498   GATACGGGACATAAG GGACCTCCAAG-TGCGAT CAAAGT ATCGCTTCTTGGCG-TCC  GCTGACGGGGGGCCA  38 155
LQ332_RS12855 2846246 .. 2846268 -  -6.3  -3.71991   CAGAAACCCCAAGAA          CCCGACACAA CAAC CTG-GTCGGG           TAGTGAGTCCTTTGA  60 60
LQ332_RS12850 2845426 .. 2845455 -  -2.8  -4.07568   CTGGCCCCCTGAAAA       CGGACGCCATGAA GCCGT TTCA-GGCGGCAG       TCCGGAGCTGCCGGG  60 15
         ppx 2843376 .. 2843393 -  -8.4  -3.29144   TCAGGTCGTGCACAA             GACGCC AAAGTG GGCGTC              GAAGGAGCCAGCTGG  59 295
LQ332_RS12840 2840370 .. 2840391 - -17.3  -5.24129   GCGGCCCATAAAAAA           CCACGGCCC CGAA GGGCCGTGG            TCGTCATGCTTCCGT 100 55
LQ332_RS12835 NONE
LQ332_RS12830 2838570 .. 2838582 -  -5.5  -3.03124   CCTCACCGGGGAACA                GGGAT CTG ACCCC                GGTTTACACCGGCAG  48 29
        lpxH 2837670 .. 2837685 -  -8.2  -3.36273   GCTGGTCAACACCAA              GGCCAC CATC GCGGCC               TTCCGCTGAGTCCGT  60 89
LQ332_RS12815 2834697 .. 2834753 - -44.3  -4.63218   GCCGGTTGAAGAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GCC ACAAACGACTTAATCCCCTCCGTCCCC TTTTTCATGCGTTGG 100 30
         tdh 2824441 .. 2824457 - -15.1  -4.66953   GCAACACCGGAAAAA              GGCGCCC ATC GGGCGCC              TTTTTCAATTTCATG 100 89
         kbl 2821889 .. 2821905 -  -7.9  -3.91084   CGACCCTCAATCAAA              CCCTGCG CTG CGCAGGC              CTGCTGCTGCCGATG  67 411
LQ332_RS12740 2817639 .. 2817662 -  -7.4  -3.20432   ACAGATTCAAGCCAA          TCCGGCGC TACAGGCG GCGCCGAA           CCTGCATGCGGGCGG  57 120
LQ332_RS12735 2816817 .. 2816829 -  -4.7  -3.05384   CGCTTGCGTACGGAA                GCGCG AAG CGTGC                CGCGAAACGGCGGCC  47 127
LQ332_RS12730 2814592 .. 2814607 -  -6.8  -4.65933   CAGCCCCAAAAGAAA              CGACCA GTAC CGGTCG               TGGGGGCTGCGCCGG  82 181
LQ332_RS12725 NONE
LQ332_RS12720 2813200 .. 2813216 -  -4.3  -2.53911   CCAAGGGGGAAGTGA              TCCGCCA GAT CGGCTGA              TCACGCCAATGACAT  41 119
        typA NONE
LQ332_RS12680 NONE
LQ332_RS12675 2801724 .. 2801766 -    -9  -3.29461   GAACCCGTTCCAGAA CTGGA-CGCGGCGCAGCGC CGACCT GCTCGGCACCGCGTTCCTG TGGCTGGACTATCGT  59 490
LQ332_RS12660 2796570 .. 2796615 - -16.9   -3.3482   CAAGCGCTGAAGCAA GGC-GGGGTCGGAGCCCTTTCC TGC GGAAAGGGATCCGACTCCAGGC ACCCTGGCGTCCTCA  90 38
LQ332_RS12420 2756978 .. 2757000 - -11.3  -5.40072   GGTGGCGGAAAAAAA          GAACCCCCGC CGGA GCGGGGGT-C           TTCTGTGTCTGCGCT 100 51
LQ332_RS12415 2754084 .. 2754097 -  -3.1  -2.83715   TCCAGGATCAGGACA               CGC-TG GGT CATGCG               GGGTCTCCTTGGCGC  41 19
LQ332_RS12410 NONE
LQ332_RS12405 NONE
LQ332_RS12400 2748827 .. 2748837 -  -6.8  -3.53224   CAGGCGTTTCCTAAA                 GCCA CTG TGGC                 CCGCGTACATCACCC  57 65
LQ332_RS12395 2745312 .. 2745337 -   -14  -4.07568   GCGGCGTGTGGAAAA         GCGCCCGGCA CTCCCT TGCCGGGCAC          GTCCCGCATCACCAG  93 34
        hemA NONE
        prfA NONE
LQ332_RS12340 2733471 .. 2733500 -  -4.9  -3.14564   CCACGCGGGGAGGAA       GCCCGAGCGTAGCG CAG CGGTG-GCTCAGGC       GATGTCGACGCCCTG  47 20
        ppk2 2732486 .. 2732498 -  -6.3   -4.0371   GATTCTCCAGACAAA                TCGAA TAT TTCGA                ATTGAATTCGAAGAG  64 193
        wrbA NONE
LQ332_RS12315 2729299 .. 2729324 -  -5.4  -3.48288   GAATGCAGATGATAA         GGCCCT-ACGC GCGAA GCGTCAGCGCC         GCTTGCCGAAGCGGG  53 18
LQ332_RS12310 2728584 .. 2728599 - -10.4  -3.17051   CCTGCACCATCAACA              GTCCCG CCGC CGGGAC               CTGGTACGTGCGGGT  60 178
LQ332_RS12275 2721873 .. 2721884 -  -7.2  -3.72576   CCTTTCCGCAGGAAA                GGGC TCTG GCCC                 CTTTGCCGGCCAGCG  62 251
LQ332_RS12260 NONE
LQ332_RS12255 NONE
LQ332_RS12250 2718480 .. 2718520 - -28.5  -3.54297   AGGCATGAATGACAA  GGGGTCAGAGACCTTTGCC TCT GGCAAAGGGCTCTGACCCC  GAACGTGCGGCGGGT 100 99
LQ332_RS12235 NONE
LQ332_RS12230 NONE
LQ332_RS12225 NONE
LQ332_RS12220 2711758 .. 2711799 - -10.7  -3.06679   AACACTCTGATCCAA CGATCCGGAGGTTGCCGGCC AGC GGCCGGCA-CTACCGGTTGG GCATGGATGCACGCG  63 44
LQ332_RS12210 2709194 .. 2709215 -  -2.1  -3.31144   GTTCGAGGCCGAGAA           CGTGGACAC GCTG GTGCGCGCG            ACCGATGGCTTCGCC  45 163
        ahpC 2705714 .. 2705733 -  -4.2  -3.64703   CTGGCTTCAGGCAAA            CAG-GGGGC GTG GCACCGCTG            TACAAGGTAGCGGAC  53 204
        ahpF 2704069 .. 2704090 -  -4.3  -3.53722   CCGACAGGCAGACAA           TGTTCCCGG TGAT CTGGGAACG            GTGGATCAGGCCGCT  51 31
LQ332_RS12185 2702957 .. 2702978 - -15.1  -4.22346   GAAAGCCATGCAAAA           GGCGGCACC TGCT GGCGCCGCC            TGTCTGTATTGTGGG 100 95
         rnk 2702497 .. 2702516 -  -5.6  -3.20991   TGCAAGGGAATCGAA            TCGC-GCGC GGT GCGCAGCGG            TAATCAGGGGTGATC  51 29
LQ332_RS12175 2701113 .. 2701134 - -17.3  -5.45802   GTTGGAAAACAAAAA           GGACGCGGC TTTC GCCGCGTCC            TTTTTGTTTGTTTCT 100 404
LQ332_RS12160 NONE
LQ332_RS12155 NONE
LQ332_RS12150 2696261 .. 2696285 -  -7.1  -3.53012   CGGTTGCTTGGGAAA         CCGGCGC-GC AGTGTA GCTGCACCGG          CCTGTATCGGGTGTG  57 49
LQ332_RS12145 NONE
        rlmM 2694554 .. 2694583 - -15.7  -3.53091   AGGCTCCTTGCCAAA       GGGGTACCGGGAG CGTA CTCCCGGCACCCT        GTGCCGCCGATGACG  90 43
LQ332_RS12135 2694076 .. 2694131 -   -38   -4.8622   CGTCTGAAGCAAAAA GGGGACGGAGGGGATTAAGTCGTATG TGCA CATGCGACTTAATCCCCTCCGTCCCC TTTTTTCAGTCAACC 100 31
LQ332_RS12120 NONE
LQ332_RS12115 2690402 .. 2690416 -  -4.2  -3.03243   ACGGATGGGTGAAGA               CCAGCA TCG TGCCGA               CTCAGCGCTGGCGCT  44 27
LQ332_RS12110 2689444 .. 2689460 -  -7.2  -3.35371   CATAGGGGCAATGAA              GGCGGA CGGAT CCCGCC              GGTTCGGGTTCATCC  55 35
        lptD NONE
LQ332_RS12100 NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
LQ332_RS12080 NONE
LQ332_RS12075 2681601 .. 2681648 -    -4  -4.47217   AAGTATCAACGAAAA CAC-CGGCGGGGTAGCGTCGACT GTT AGTCGACTATAGCGCGCAGCGCG GGGTTTTCAGGGGGG  71 68
LQ332_RS12025 2672841 .. 2672851 -  -3.2  -3.38326   GACAACGCCAACGAA                 CTGC TGG GCAA                 CCGGCCGGTGTCGGT  47 477
LQ332_RS12005 NONE
LQ332_RS12000 2666613 .. 2666640 -  -4.1   -3.4252   GCGCAGCGACTACAA        CGCGCTGGCCGT GGTCA ACCGCCA-CACG        CTCACGCCCAATGGC  49 497
LQ332_RS11970 2660112 .. 2660123 -  -5.8  -3.17194   AGGGGTTCAACTGAA                GTGC GTGA GCAC                 GCCGGCGATGGTCGC  49 5
LQ332_RS11965 2659062 .. 2659087 - -17.5  -4.65933   GATGGGCAAAAGAAA         GGCCCGGGTGC CTGC GCCCCCGGGCC          GTCTCATCCACGCGT 100 50
LQ332_RS11960 2658540 .. 2658553 -  -3.1  -2.52464   TGGGCGGCTAACCCA               GGCGCT GCC AG-GCC               TGGTGGGCGCCCAGG  39 4
        dusB 2657353 .. 2657368 -  -4.6  -2.64155   GGCTCTGGAAATTCA              GTCGGG CAAG CTCGAC               TCGACGGCGTGGCAG  43 46
LQ332_RS11950 2656433 .. 2656449 -  -7.9  -3.41962   CGGCAAGAGATAAGA              TCCACGC CAT GCGAGGA              TGCGGGAGCATTAGT  58 52
LQ332_RS11945 2655198 .. 2655214 - -12.3  -2.78384   GTGCCGTTGAGTAGA              TCCACGC CAT GCGTGGA              TGAAGGGACATCGGC  65 119
        metK 2649790 .. 2649806 - -15.1  -4.79223   GGAGACCATGAAAAA              GCCGGCC AGC GGCCGGC              TCTACCGGAAAAGAG 100 71
LQ332_RS11920 2649108 .. 2649121 -  -3.8  -3.29144   GCAGGGTGTGCAGAA               CACC GGCTGA GGTG                TCGCGGTAGTGCCGG  47 109
        ahcY 2641953 .. 2641978 - -20.5  -2.66272   CCGCACGCAAACGCA         GAACGGGCGCC CGAA GGCGCCCGTTC          CGTTCTTTGCATGCA  93 78
        ybaK NONE
LQ332_RS11895 2640804 .. 2640815 -  -7.2  -3.78934   GTTCTGGGAGAACAA                CGCC AACT GGCG                 GCCCTGAGCGGCATT  62 107
        metF NONE
LQ332_RS11865 2635730 .. 2635785 -  -8.3  -3.17075   CTGTGGCCAACGTAA CGCCGCGCACGCGGGGTCAGATCCCTGC GCA GCAGGCCTCTGACCCCATG-GC-CGA-G ATCCGGGGTCAGAGC  57 73
LQ332_RS11845 2630005 .. 2630024 - -12.1  -5.20783   ATTTAAAGATAAAAA            CGCCGCC TTTCCG GGCGGCG             TTGTTGTTTCTGGCG 100 256
LQ332_RS11765 2611703 .. 2611716 -  -5.9  -3.53224   GATCGCGCGGCGAAA               GGCCG GGCG CGACC                ACCCTGGGAGGTGAG  55 326
LQ332_RS11760 2611078 .. 2611128 - -12.8  -3.20382   TTCCATAGGCACGAA CTGC--GCATCG-GTAG-TGCCGGCC GCT GGCCGGCAGCTTCACGATGCCCGCAG CGGCGGACAGGGTGC  74 82
LQ332_RS11750 NONE
LQ332_RS11745 2608781 .. 2608804 - -12.4  -2.53715   GCGATGACGAGGAAG          CGCAGCTGGCC CAC GGCC-GCCGCG          TCTACGCGAAGCTGA  62 256
LQ332_RS11735 NONE
LQ332_RS11730 NONE
LQ332_RS11725 NONE
LQ332_RS11720 2603821 .. 2603837 - -15.1  -2.64616   TCTGGAGGGAGAGCA              GCCGGGC ACG GCCCGGC              TCTGCAGGAGAGCGT  74 46
LQ332_RS11705 2595291 .. 2595335 - -25.2  -3.48276   GGTGCGCGGACAGAA TGTCTGCCGACGCCACGCAT AGGGA ATGCGCGACGCCGGCAGACA AGCGTAACCAACAGA 100 287
LQ332_RS11700 2594211 .. 2594243 -  -3.3  -3.78775   TGGCCGACTACGAAA     GCCTGCGCCTG-CGC CTGCT GCGGCCGGCGCCG-C     GGGTGACCCTCGGCC  55 512
LQ332_RS11670 2589552 .. 2589571 - -16.4  -5.75342   GCGGGCCAAAAAAAA            CGGGCCCC TCGC GGGGCCCG             TTCGATCGCACGACG 100 57
LQ332_RS11665 2588531 .. 2588551 - -16.1  -4.07568   TGTGCTGGCTGAAAA            GCCGCGCAC ATC GCGCGCGGC            CCGCCGTTACCACCT  95 40
LQ332_RS11660 2587653 .. 2587669 -  -5.1  -3.10715   GTCAGCATCATGGAA              GCCTTGC GGA ACAAAGC              GGACGGCGGAGCATA  47 106
LQ332_RS11655 2587190 .. 2587210 - -10.3  -2.71712   GTGGCGTTGGGAAAG            GCGCCGCGC TTG ACCCGGCGC            TACAGAGTCGCGCGA  59 65
LQ332_RS11650 2586397 .. 2586419 -  -6.3  -3.39895   CGCGGCATCAACGAA          GTGCACACCG AAGC CGGTGC-CAC           GCTGGCCGGTGCGCT  55 254
        ettA 2579411 .. 2579438 - -21.4  -3.35046   GGACGGCCTGAAAGA        CGAAAGGCCGCG CGAG CGCGGCCTTTCG         TGTTCTGCGGTTTGG 100 42
LQ332_RS11605 NONE
LQ332_RS11600 2576996 .. 2577039 -  -8.9  -2.73364   GTGGCAGGTGAATCA CCACCCG-GTA-G-TGCCGGCC GCT GGCCGGCATCGCCCCCGGGTAG CAGGTGAGTCACCAC  53 133
LQ332_RS11595 2575685 .. 2575695 -  -3.2  -2.70932   GTTCGCGCTCAACGA                 TACG CAA CGCA                 GCTGGTCGCTCGGCG  40 192
LQ332_RS11550 2560905 .. 2560919 -    -7  -3.01712   GTGGGCGCGCGAATA               CCGTGG CGA CCTCGG               CATCGCGCTGTCCGA  52 481
LQ332_RS11460 2529867 .. 2529891 -    -5  -3.61398   CGTGCCGGCCAAGAA         CTGCACCAACC CGGT GGC-GATGCAG          TACGCGCTGGGCCAG  54 214
LQ332_RS11445 2527605 .. 2527620 -  -3.2  -3.06796   CTGGATCGGATTGAA              GGGTGA CGCA TCACCG               CTTGGGCATGCGCAC  43 20
LQ332_RS11430 NONE
LQ332_RS11425 2523243 .. 2523286 -  -2.9  -2.72379   GTAATCGTTGAAGGA TCAGGGCGCGGCGGCGGCCC ATCAA GGGG-GCCGGGGCGCGCTTA CATGTCGTGCTTGTT  40 23
LQ332_RS11420 2520345 .. 2520373 - -24.7  -3.50393   CCCGACTCTACAGAA        GGAAACGCCGGGC AGT GCCCGGCGTTTCC        CTGCGACGGTTACAG 100 35
LQ332_RS11415 2519243 .. 2519256 -  -5.2  -3.08679   TGCGCCCATCCAATA               CGCC GGCACT GGCG                CTGTACCACAGCGAA  46 206
LQ332_RS11395 2517041 .. 2517066 -  -3.2  -3.25093   ACAGCCGAAGCAACA         GC-GGGTCATG CGGCT CACGCCCCCGC         AACCGGACCCGCCCC  45 125
LQ332_RS11390 2515170 .. 2515189 -   -15  -6.22802   CGGCAGAAAAAAAAA            GACCGGGG CAGG CCCCGGTC             TTTTTGCCGATCAGC 100 36
LQ332_RS11385 2514543 .. 2514574 - -21.8  -3.35934   CCACACACCGGAGAA      TGAAAAACGCCGGC TTTC GCCGGCGTTTTTCA       TTCCAACCCGATCCG 100 44
LQ332_RS11375 2512018 .. 2512032 -  -2.8  -2.75074   TTCAGGGGAAGAGGA               GGTG CTCATGT CACC               AGTCCATGTGCATGA  40 21
LQ332_RS11370 NONE
LQ332_RS11365 NONE
LQ332_RS11360 2509581 .. 2509621 - -24.1  -3.71848   CGCGGTGACGAAGAA  GGGGTCAGATCCCTTTCCC GTC GGGGAAGGGCTCTGACCCC  TGCGACGCGTCAGCG 100 35
LQ332_RS11350 2506582 .. 2506604 -    -4  -3.64487   GCACACCGCCAAGAA           CGGCGAGCAC AAG ATCCTGGCCG           AATGCACGCTGCCGC  51 230
LQ332_RS11335 2503793 .. 2503807 -  -3.5  -2.78384   CCGTCCCGCATCAGA               TCGCC ACCAG GGCAA               ACCCGGCGCACAGCA  40 6
LQ332_RS11330 NONE
LQ332_RS11325 NONE
LQ332_RS11320 NONE
LQ332_RS11315 2499478 .. 2499515 -  -2.5  -3.17051   CGGCCAGCAGGAACA   GC-AGGAACGGGCGGGAC AGG GTCACGCCACCGCCTCGC   GGGCCATGGCACGCC  42 9
LQ332_RS11310 2499093 .. 2499109 -  -3.5  -3.53091   AGCGTTTTCCGCAAA              CGGCACC CCG GGAGCAG              TCATCGGAACGACAG  49 26
LQ332_RS11305 NONE
LQ332_RS11300 2496158 .. 2496190 - -16.4   -2.8655   TGGAGTGAGATGAGA      TGGAAACCAGAGCC GCGCG GGCTCTGGTTTCCG      CTCAATTTCGGCGGA  84 95
LQ332_RS11270 2489720 .. 2489733 -  -3.8  -2.78463   ATCTTGCTCATTACA               GCAG CCCCTT CTGC                TTGAGTGCGGCCACC  42 7
LQ332_RS11265 2488714 .. 2488743 - -10.6  -3.61988   GGATCCAGAAATGAA       GGGGGGGGCGTC TGTTTG GACGCCCCCTCG        GGTAGATCTGGACCT  71 59
LQ332_RS11260 NONE
LQ332_RS11255 NONE
LQ332_RS11250 2487182 .. 2487201 -  -5.6  -3.32844   CCCTTTAGTGGATAA            GGCCG-CCG GAT CGGTCTGCC            TGCAGCTCTGTCAGT  53 36
        galE 2486062 .. 2486074 -  -3.3  -3.09516   CCTGCGACGACGGAA                GCCTG CGA CAGCC                CGGTTACACGGGCAG  43 92
LQ332_RS11240 2483862 .. 2483884 -  -3.3  -3.88232   CCGCCGACAGAACAA           CACCTGCCG CCAGC CCGCAGGCA           GTGGTTGCCCTGCGC  56 45
LQ332_RS11235 2481438 .. 2481462 -  -7.1  -3.03159   TGAAGGTCTCGAAGA          TCGTTGGCGAG TTC CTCGCCAAGCA          CGTACGCAATACCAG  52 305
LQ332_RS11175 2466580 .. 2466635 - -31.4  -4.84017   AATTCTTCAGAAAAA GGGGACGGAGGGGATTAAGTCGCAAG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTTCGTGGGATCA 100 38
LQ332_RS11170 NONE
LQ332_RS11165 2463754 .. 2463809 - -35.2  -5.40072   GCCGCCTGAAAAAAA GGGGACGGAGGGGATTAAGTCGTA TATGCACT TACGACTTAATCCCCTCCGTCCCC TTTCTGCCGCAAACG 100 8
LQ332_RS11150 2459939 .. 2459960 - -17.3  -5.75945   AGCCGGCAAAAAAAA           GGACGGCGC GTCA GCGCCGTCC            CTCGATAGCCCCCGC 100 73
        queD 2453894 .. 2453922 - -16.1  -5.13741   GCAATGCAACAAAAA        TTACAAAGGCGCC CGA GGCGCCTTTGAAA        ACCCTTTAAGATCAG 100 49
LQ332_RS11130 2453405 .. 2453434 - -15.1  -5.47218   CGCCAGGCAAAAAAA       GACCCGGCAGA GGGAGGGA TCTGCCGGGTC        CGGATTGCGTGGGAG 100 72
LQ332_RS11120 2449823 .. 2449873 -  -2.3  -3.16564   GCCGTAGCGCAGGAA GTGGAAGGCGTGGCCGCGCATCGCC GAC GGCG-TGCGCGTCATCCCCATGC-C GAGCGGCTGAACAGG  42 13
LQ332_RS11115 2448230 .. 2448255 -  -2.5  -3.29461   CAACCTGCTCGACAA         CGCGCTGCGG CATGCAC CCG-AGGGCG         GGCATATCGAGGTGC  45 288
        msrB NONE
LQ332_RS11095 NONE
        msrA NONE
LQ332_RS11085 2441258 .. 2441302 -  -7.8  -3.44051   GCGCCAGGACGAGAA CATCGCCACGCTGCGGCAGCGG CTG CCGATGCCGT-GC-TGGGGACG GCTGCCCCATCTGCC  58 159
LQ332_RS11075 NONE
LQ332_RS11070 2439730 .. 2439759 - -10.7  -2.73875   GCGCTGCGAAGATCA       TGCAGTTGCCGGCC AGC GGCCGGCA-CTACC       GGTGCTATCAATCCT  59 33
        btuB 2435507 .. 2435538 - -14.4  -3.05816   CCAGGGCCGACGCAA      CGGGTAGTGCCGGCC GCT GGCCGGCAAC-CCCG      AGGACGTCGCCGAAG  76 88
LQ332_RS11035 NONE
LQ332_RS11030 2430951 .. 2430995 - -22.1  -3.57144   CCTCTGATCGTCAAA GGCGGGGTCAGCGCCCGTTGC GCA GCAACGGGATCCGACCCCGGC AGATTGCCGATATCT 100 242
        fabA NONE
        fabB 2427896 .. 2427927 -  -6.4  -3.05384   TTGCTGCCGAGGTAA      CGGTGGGTGCCGTCC GCT GGTCGGCACGC-CTG      CCCCATCACACCCGA  51 31
LQ332_RS10995 2425006 .. 2425022 - -13.7  -2.78816   GGAGGTTGCAGTAGA              GCCACGC CGT GCGTGGC              TGCTGGGCTCAGTGC  73 34
LQ332_RS10980 2421750 .. 2421768 -   -16  -3.08464   CCAGGAGTGACGTAA             TGCCGGCC AGC GGCCGGCA             TTACCAAGACCAGGG  82 72
LQ332_RS10965 2418618 .. 2418649 -  -8.1  -3.16742   GGCAAGCCGCAGGAA     CAGCGCT-C-GCAGA AGCA TCCGCAGCAGCGCTG      ACTATCGCCATGACC  55 138
        msrB 2417340 .. 2417371 -  -9.4  -2.73159   GGAATTCTGTGAAAT      CGGT-CAGCGGGGTG TTT CAGCCCGCCACACCG      GCTTCGGCACCGCCA  56 10
        motA NONE
        motB 2415369 .. 2415383 -  -7.8  -3.50832   CTGGAAACGGAAAGA               CCGCCA TTG TAGCGG               GTGCGCCGGGGGATG  60 110
LQ332_RS10935 NONE
LQ332_RS10930 2414375 .. 2414413 -  -8.6  -3.14211   ACCCGTTCTGAGCAA   TGGGCCGATCCGCCGGGC ACG ACCCGGCGGGTTGATCCG   CTGAGGACGACCCGA  57 174
LQ332_RS10920 2413253 .. 2413271 -  -9.5  -2.90904   GGAGAAGGACAACGA             CGGGCCC GACGT GGACCCG             GAGAAGGTGCGGCGC  57 243
LQ332_RS10900 2409028 .. 2409040 -  -7.7  -2.64735   AGGCGATGCAGACCA                TGCAG CGC CTGCA                TGAGCAGGGCATCCG  48 449
LQ332_RS10890 2403987 .. 2404006 - -16.4  -4.07246   CCACCTGAAATGAAA            CGGGCGCC TTGC GGCGCCCG             TTCCGGTTACATCAC  95 37
LQ332_RS10875 NONE
LQ332_RS10865 2398800 .. 2398831 - -23.2  -3.07113   CAGGACCCGATGGAA      CACTGCCACCGTGA GTGA TCACGGTGGCAGTG       TGGATCCCCCGCTAC 100 50
LQ332_RS10785 2383854 .. 2383870 -  -5.8  -3.40403   CCTGCTGGACGACAA              CGACCA GCCGA TGGCCG              CCGGCAGCGATGGCG  55 449
LQ332_RS10775 2380513 .. 2380530 - -12.7  -2.77899   GCTCCGGATGAAGCA             GCCGAGC GTGG GCTCGGC              GCTACAGGCAATCGG  68 42
LQ332_RS10760 NONE
LQ332_RS10745 2372684 .. 2372719 -  -6.8  -3.12668   CAGCGGCAGAGCCAA    GCCATGCTCGGCTGACC TTG AG-CATCCACGCATGGC    GTCGATCTACGGCAC  51 32
LQ332_RS10740 2370756 .. 2370811 - -11.9  -2.70932   CTGCCTGCTCAACGA CCAGGAACTGCGTGCCGGACC-GCTGC TGTG GCAGCAGATGCCGCAGGC-GTTCCCGG TGTGGAAGCGGTGAC  65 121
LQ332_RS10730 2368920 .. 2368933 -  -9.5  -3.01712   GGTGGGCGCCGAAGA               CCCGC AGCA GCGGG                CGGCCGAGGCCGAGG  59 152
        dmeF NONE
LQ332_RS10710 NONE
LQ332_RS10705 2365960 .. 2366002 - -18.5  -3.52539   GAAGCCGAATCATAA GCCCGAGTAGGAAAGGGCGC CTCG GCGCCCTTTCCTCCGC-GGC GGGGGCCTGGTATCA  93 38
LQ332_RS10700 2365696 .. 2365718 -  -4.1  -4.14739   GGATCTACTGCAAAA          GCAGCCGAGC GTGG GCTTGGCT-C           TACAGTTCAATCGCA  62 32
LQ332_RS10695 2364333 .. 2364356 - -11.6  -3.18681   TGCCAACGTGATGAA          CGAGCAGGCG GACT CGCCCGCGCG           CGCAGCGACGCTGGC  64 408
LQ332_RS10680 2361754 .. 2361775 -  -7.3  -4.63527   GGATGACCTGAAAAA           GATCACGGT GCCG ACCCTGATC            CTGCACGGTGACAGC  81 486
LQ332_RS10665 2360404 .. 2360426 -  -3.4  -2.94099   CCGCGCCAGTATAGA           TCCGGC CGGTGAAGGAC GCCGGA           AAGGTCAATCCGCCG  42 30
LQ332_RS10660 2359828 .. 2359848 -  -5.3  -3.22298   CGCACGCAGGATGAA            CTGCAGCAG CGC CAGGTGCAG            GAGCAGTCCGGTCCG  47 116
LQ332_RS10625 NONE
LQ332_RS10620 2351648 .. 2351661 -  -3.1  -2.66598   GAAGCAAGGGAGAAT               GACCT AGGG AAGTC                TCAGGGGCTGCGATC  40 77
LQ332_RS10615 2351055 .. 2351094 -   -23  -2.53263   TGGACCGCGAACGGA  TTGCCAGCCGGCGCCACA CGAA CGTGACGCCGGCTGACAA   GCGCAAACACATGGT 100 336
LQ332_RS10610 2350204 .. 2350214 -  -6.8  -3.89695   TGTCCACAAACAGAA                 TGGC ATC GCCA                 AGTACGCTCATATCA  64 361
LQ332_RS10605 2348634 .. 2348654 - -11.1  -2.92192   GTGGATTGAAGCAGA            GGTGTCGCG CGC CGGGACACC            GGTCAGCGCTGGCTC  65 395
LQ332_RS10585 2341577 .. 2341602 -  -4.5  -3.57144   GGTTTTACCTGTAAA         GGTGTCGCGCG GGCG CGCGCGGCATG          GGGGGAGACCTGGCT  53 45
LQ332_RS10580 2340415 .. 2340431 -  -6.5  -3.28924   CACGCTGGTGGACAA              GGCCG GCACCCT CGGCC              TGGAACCCAAGGTGG  52 356
LQ332_RS10570 2339102 .. 2339127 - -19.1  -2.59431   CGTCGTGAGAAGGCA         GAAGGCCCGCT GAAA AGCGGGCCTTC          TTTTTTGGGGTGCGG  89 153
LQ332_RS10555 2336353 .. 2336399 - -15.2  -2.78384   CGCGCGCCGATCATA CGCT-GCTCGGCGCAACGGGCG ATCCA CGCCC-TTGCGCCGCGCGATCG GGTCGTGCCGGCCGC  75 227
LQ332_RS10550 NONE
LQ332_RS10545 NONE
LQ332_RS10540 NONE
LQ332_RS10535 2333715 .. 2333734 -   -10  -3.78329   TGGCATGAATGCAAA            GCGCCAAC CAAG GTTGGCAC             CTGCCAGGGCAATGG  74 44
LQ332_RS10525 2328852 .. 2328899 - -35.8  -2.52676   CACCGCGTGAAGGTA GAGCCGGCCGCTGGCCGGCT GTAGGGGG AGCCGGCCAGCGGCCGGCTC TACCCGATGTCCGGA 100 48
LQ332_RS10475 NONE
LQ332_RS10470 2314979 .. 2315001 -   -12  -4.46404   GAAGCAAGAGCAAAA           GCATCCACGC ATG GCGTGGATCC           ACGGGATGCCGTTGT 100 295
LQ332_RS10465 NONE
LQ332_RS10460 NONE
LQ332_RS10455 2311703 .. 2311721 -  -6.6  -3.26471   TGATTGCCAGATCAA             TCCGACCG GCA CGGCCTGA             TGCGGCCGGTCACCC  54 35
LQ332_RS10450 2311254 .. 2311288 - -18.1  -3.13432   CGGAACAGGAGTGAA    TG-TGTAGAGCCGAGC CCAT GCTCGGCTCTACAGCA     GCAGGGCGCTATCGC  89 34
LQ332_RS10440 2309257 .. 2309276 -  -4.8  -3.20878   GAAGACCGAAGTGAA            GGTCCCCC GCAT GCGGGGCC             GTCTGGCAAGGGTAG  49 211
        rpsU 2302296 .. 2302320 - -13.6  -4.81249   CCGGAAACGCAAAAA         GCCGGCGACGC TCGC GCGT-GCCGGC          TTCGGCTCCCTCGCG 100 75
LQ332_RS10405 2301741 .. 2301783 - -24.2  -3.14463   AAGCGGGTGCATCAA TGGGGTCAGAGCCCTTCCGC GCT GCGGAAGGGATCCGACCCCG CGTGCCGGGTTACGC 100 35
LQ332_RS10400 2300714 .. 2300724 -  -2.4  -3.04144   GGGCCATGGGCAACA                 GGGC AGG GCGC                 GGTGCAGGACCACGC  41 68
        dnaG NONE
LQ332_RS10390 NONE
LQ332_RS10385 2297404 .. 2297424 - -15.5  -2.62184   CTCGGCTCCACAGTA            GATCCACGC CAT GCGTGGATC            ATTCCCCGGATGGTC  77 39
LQ332_RS10360 2293188 .. 2293204 -  -5.8  -3.08464   CCACCACGCACTGAA             GGCCGGC AACC GCCG-CC              AGCTGCTGGTCTGGC  48 363
        putA 2285158 .. 2285173 - -11.8  -5.31456   GCAAGGCACAAAAAA              CCCCGC GTTC GCGGGG               TTTCTTGTTTGCCGC 100 54
LQ332_RS10310 2280938 .. 2280959 -  -7.3  -3.16961   GGACAAGATGGAATA           CAGCGTGGGC TAC ACCCAC-CTG           TTCACCAAGGATCCG  53 197
LQ332_RS10300 2278691 .. 2278717 - -13.6  -3.30441   TACCAGGGGTCAGAA         GTGGAGCCGGCC AGC GGCCGGCACTAC         CAGGGGTCAGAACCC  80 32
LQ332_RS10280 2274343 .. 2274356 -  -5.9  -4.64861   TTCCTGGAAAACAAA               GGGCG GCCG CACCC                AGGCGCGGCCGGTAC  79 76
LQ332_RS10275 2272552 .. 2272573 - -18.7  -5.10933   GTACGCAAAAGAAAA           GCGGCGCCC CGTG GGGCGCCGC            TCAGGCTTGAATCAT 100 64
LQ332_RS10215 2258042 .. 2258070 - -16.8  -5.64274   GCAGGCATAAAAAAA       GGACGCGGCAAGC TTGG GCT-GCCGCGTCC        TTCTTCGTCAACGCA 100 45
LQ332_RS10210 2256620 .. 2256643 -  -8.8  -3.13867   GGACCCACGAACAGA          CCTGCGCC-GC CTT GCTGGAGCAGG          GCCTGTTCAGCAGTG  56 280
        pyrE NONE
LQ332_RS10185 2252740 .. 2252775 -  -8.9  -3.85698   CCTGCCGCCCATAAA    CGCACTACGCGCCGG ACCGGG CCGACGCGTAAAGAG     TGCATAAATTCGGTG  69 96
LQ332_RS10180 2252589 .. 2252600 -  -3.6  -3.28712   CCGGCTCCGTTAGAA                CGAC TCGG GCCG                 CAGCACGACATAGAG  45 8
        kdpA NONE
        kdpB NONE
        kdpC NONE
LQ332_RS10160 NONE
LQ332_RS10155 2244689 .. 2244746 - -47.4  -2.64218   ACGCTGCAGCAGAAT GGGTAGTGCCGGCCGCTGGCCGGCAA GCCCAA TTGCCGGCCAGCGGCCGGCACTACCC CTTGAACCGCAATCC 100 20
LQ332_RS10135 2239580 .. 2239592 -  -4.7  -2.57132   TCGGCGTCGGACAAG                GTGGC GGG GCCGC                GGGCGATCAGCTTCT  43 151
LQ332_RS10125 NONE
LQ332_RS10120 NONE
LQ332_RS10115 2236868 .. 2236888 -  -6.2  -3.33815   ACCTTCTTCAACTAA           CAGCACTCT CATC AG-GTGCTG            AAGAAGATGGCCCTG  53 76
LQ332_RS10090 NONE
LQ332_RS10085 2223678 .. 2223694 -  -6.5   -3.7732   GCCGCAGACTAAGAA              CGCGCAT TCC ATGCGCC              GTCATCCTTCGATGA  62 489
LQ332_RS10075 2222376 .. 2222386 -  -2.4  -3.53012   GGCCGCGGGCGGAAA                 GCGC CGT GGGC                 AAGATGCCATCCGCG  47 87
LQ332_RS10060 2220049 .. 2220071 -  -6.9  -4.10552   GTTCAGCAAATGAAA          CG-GGGCGGC CCTC GCCGACCACG           AAGTGGTCCAGCAGG  68 203
        argS NONE
LQ332_RS10045 2217247 .. 2217263 - -15.1  -5.49569   CAGGAACAGAAAAAA              GCCGGGC ACT GCCCGGC              TTTTTCATTCAGATC 100 48
LQ332_RS10035 2215654 .. 2215677 -  -3.8  -3.07994   GTCAACCTGATGGAA          CTGGTCGAACG CTT CGTCCG-CCAT          GGGCTGGCCGTCGGC  43 177
LQ332_RS10025 2213475 .. 2213492 - -11.3  -3.14132   GTGCCGCTGCATGAA             CGCTTCC GCCT GGAAGCG              GCGGTGGGCCAGTAC  64 214
LQ332_RS10015 2212287 .. 2212313 -    -5  -3.69323   TCAGCACCAGCGAAA         TGGCCCTGCG GTCAGGG CGCTCGGCCA         GCACGATCAGTTCGC  58 130
LQ332_RS10000 2210291 .. 2210313 - -12.7  -3.76224   CTGGCAGCGATGAAA           CGGACGCGC GCTGA GCACGTCCG           CCGGCTTCAGCGCGT  84 32
LQ332_RS09985 NONE
LQ332_RS09980 NONE
LQ332_RS09975 NONE
LQ332_RS09970 2205246 .. 2205278 -  -5.4  -2.69528   GGAAAGGGAAACGCA     TTATCCGCCG-GCCG TCTG CGGCGCGGCGGTTTC      CATGGATCAACGTTC  44 32
LQ332_RS09965 NONE
LQ332_RS09960 NONE
LQ332_RS09955 2201904 .. 2201919 -  -8.2  -3.29829   CACATCCTCGCAGAA              CCCGGC CGGG GCCGGA               ATTCAATTTTTCGTC  59 92
LQ332_RS09950 NONE
LQ332_RS09945 2200179 .. 2200200 - -11.5  -3.90744   CGGTCGCGCAAACAA           CCCGCCGGG AACT CCCGGCGAA            CCCGATCATCACTCC  79 34
LQ332_RS09930 2196170 .. 2196211 -  -4.9   -3.5774   ACGGAAGGCGGGAAA CG-GGGAAGCGCACCCGCGA TGG CCGCGGGCGAGCGTCGAGCG GTGCTGCCGGCGGCG  55 59
LQ332_RS09925 NONE
LQ332_RS09920 NONE
LQ332_RS09915 2192893 .. 2192914 - -15.9  -6.26417   CATGACAAAAAAAAA           GGACGGAGC CTTC GCTCCGTCC            TTGCGGGTGTGCCGC 100 56
LQ332_RS09900 2189236 .. 2189268 - -21.3  -2.57132   GGGCGGCGGGAGAAG      CCGCGGCCACCGGCA GTG CACCGGTGGCCGCGA      TCACGGCAGCGCGCT 100 40
LQ332_RS09895 2188740 .. 2188753 -  -2.4  -4.09685   GCCCACGTGGGAAAA               GGAA TCGGAG TTCC                GCAGCGCGCGTGACA  58 191
LQ332_RS09870 2182851 .. 2182870 - -16.4  -3.68359   GTTGGAAAACGAGAA            GGCCGGGG ATTT CCCCGGCC             TTTTTTCTGCGCGGC  91 481
LQ332_RS09850 2180652 .. 2180665 -  -3.7  -3.01712   TGGGCGCCTGCAATA               TGCGC AAGG GCGCT                CAGGGCGCACTGGTC  43 241
LQ332_RS09840 2178928 .. 2178956 -  -3.7  -3.20901   ACGTGATGAAGCCAA        TGGGCGTCCAC TGAGAAC GCGGACCCCCT        TGCTGATCAACCAGC  47 104
LQ332_RS09825 2175202 .. 2175217 - -11.8  -3.42078   CACAGCCCACCACAA              GCCGCC TACG GGCGGC               TTTCTTGTGCCTGGA  73 42
LQ332_RS09800 NONE
LQ332_RS09795 NONE
         gpM NONE
LQ332_RS09785 NONE
LQ332_RS09780 NONE
LQ332_RS09775 NONE
LQ332_RS09770 NONE
LQ332_RS09765 NONE
LQ332_RS09760 NONE
LQ332_RS09755 NONE
LQ332_RS09750 NONE
LQ332_RS09745 NONE
LQ332_RS09740 NONE
LQ332_RS09735 NONE
LQ332_RS09730 NONE
LQ332_RS09725 NONE
LQ332_RS09720 NONE
LQ332_RS09715 NONE
LQ332_RS09710 NONE
LQ332_RS09705 2159203 .. 2159217 -  -2.1  -2.87564   GTAGTCCTCTACACA              GCGAGG AATT CCT-GC               TGCGCCTTCGGCAAG  40 4
LQ332_RS09700 NONE
LQ332_RS21190 2158908 .. 2158918 -  -2.4  -2.79796   GCTCATGCGACGACA                 GCCG AGG CGCC                 GACTACGGAGCGGGG  40 28
LQ332_RS09695 NONE
LQ332_RS09690 NONE
LQ332_RS09685 2154449 .. 2154473 -   -15  -4.40605   AGGCAGAAACAGAAA         GGGCGCCCACG GAAA CG-GGGCGCCC          TTTGTCCACGGCGCT 100 145
LQ332_RS09675 NONE
LQ332_RS09670 NONE
LQ332_RS09665 2152608 .. 2152628 -  -2.5  -5.42259   GCAGGCGCAAAAAAA            CCGCG ATGCTTACGGG CGCGG            ATGCCGCTGTATCTT  89 143
LQ332_RS09660 NONE
LQ332_RS09655 NONE
LQ332_RS09650 NONE
LQ332_RS09645 NONE
LQ332_RS09640 NONE
LQ332_RS09635 2147919 .. 2147929 -  -2.4  -2.74012   GGATCAGCTCAAGCA                 CGGG CCA CCCC                 CTTGCTGCCGGCGGC  38 8
LQ332_RS09630 NONE
LQ332_RS09625 NONE
LQ332_RS09620 NONE
LQ332_RS09615 2145275 .. 2145293 -  -3.7  -3.02043   AAGGTTCCTCCAACA             CCGCGGC TGTCG GCTGCAG             GCCGTGTTGTTTGTG  44 211
LQ332_RS09610 NONE
LQ332_RS09605 2143750 .. 2143770 - -18.3   -5.4505   GGTTTCAACAAAAAA            GGCCAGCGC GGG GCGCTGGCC            TTTTTTGCGTCTACC 100 60
LQ332_RS09580 NONE
LQ332_RS09575 2139817 .. 2139847 -  -8.8  -2.75992   TGCCATCGAAGAGCA       TGAGGGTGCCGGCC AGC GGCCGGCACTACCG       TATTGCGATGCTGGG  53 20
LQ332_RS09540 NONE
LQ332_RS09535 2130972 .. 2131016 -  -2.5  -3.69323   TCATCACCAGCGAAA CGTGACCTGGTAGTGCCGGCC GCT GGCCGGCAACCTCATGCCCCC CTGTGGGACAACGAA  53 151
LQ332_RS09505 2123840 .. 2123859 - -13.6  -2.58544   GCGCACCGCCAGAAT            GTGCCCAC CAAG GTGGGCAC             CCCACCAAATGGCGA  70 120
LQ332_RS09490 NONE
LQ332_RS09485 2118309 .. 2118363 - -13.6  -3.05343   CGGATACCGTGAACA GGACGCGCGCGGCCA-CACCG-CCTGC GCGC GCAGGACGGCGACGGCCCCG-GCACCC TCCCCGCGGAGAGTC  76 367
LQ332_RS09480 2117554 .. 2117576 -   -17   -3.7511   TCCGGTACAACAGAA           GGGGCGACCA GCG TGGCCGCCCC           ATGCGCACACGTCAA  91 37
        pncA NONE
LQ332_RS09470 2115869 .. 2115888 - -11.4  -2.76468   GATCATCGAACAGGA            CGTGGCCC GGGT GGACCACG             CGATGGCACCGCGTG  59 150
LQ332_RS09460 2113969 .. 2114011 - -13.2  -2.53382   AGCAGGCTGAATCGA TCCTGCGCCATCGCCACGCC GAT GCCGTGGCGCTGGCGCGCGG CATTCTCTACGACCC  65 153
LQ332_RS09440 2110814 .. 2110831 - -14.1  -4.05446   TGTCGCAACGAGAAA             CCCCGGC CAAT GCCGGGG              TTTTTCGTTTCTGTG  93 109
LQ332_RS09415 2103881 .. 2103892 -  -2.2  -5.07652   CGCGCGAAAAGAAAA                GTGA CATC CCAC                 CGCGGGCGCGGAAAT  79 60
LQ332_RS09395 NONE
LQ332_RS09390 2097499 .. 2097537 -  -3.2  -2.62263   ACGTGCTTCATAGGA  GCGTGCTCGGTCATG GCACGGGTCA CATG-CGGAACACGC   CGAAGCGCGTCTGCT  39 9
LQ332_RS09385 2095333 .. 2095364 -  -5.7  -3.14344   GACCGCGGCGATCAA      CGATGCCGATGTC GATCGT GCCTTCGGCTTCG       ATGGCATCGGCCAGA  50 158
LQ332_RS09375 2093391 .. 2093439 -  -8.8  -2.79796   CCGGACCGCACTACA GGTGACCGCCGCACTGCTGCAGC CGAT GCTGCAGGACCGCGATGATC-CC ATGCTGCATGCGCGT  52 462
LQ332_RS09350 2085584 .. 2085639 - -22.6  -3.52204   TCAGCCGGAAATGAA TCAG-AGGCGGGGTCAGAGCCCGTTGC GCC GCAACGGGATCCGACCCCGCCCACAGT TCGCAGAAAACTGTC 100 225
LQ332_RS09345 NONE
LQ332_RS09330 NONE
LQ332_RS09325 2081250 .. 2081274 - -15.7  -4.53349   GAAGTACGAAAGAAA          TAACGGCGGGG AAA CCCCGCCGTTT          TTCGTTGCGTGGATG 100 186
LQ332_RS09305 2077023 .. 2077077 -  -4.9  -3.54424   CTGCAGCTCTGCAAA CAGGACCTTCCGCATGCAG-GGCGTGC ATC GCATGCTGCTGCACGCCGA-GCGCCTG CGCTTCCCGCATCCC  53 206
        ddlA 2071235 .. 2071258 -  -2.3  -2.52543   ATGTTCCGCAAGCGA          GGCTAGCCGG TAGTG CCGGCC-GCT          GGCCGGCATCGCTTT  37 84
LQ332_RS09250 2067786 .. 2067800 -  -4.2  -3.78934   CTTCCTGGACAAGAA               CCCGAT CTG ATCGGC               TCCCGGGCCGGCACT  56 45
LQ332_RS09225 NONE
LQ332_RS09220 2060443 .. 2060472 - -11.3  -3.33696   GGCCGGCTGAAGGAA       GCCGGCCAGCTGC AGCC GCAGCAGGTCAGC        CTGGCCAAGTGGAAC  66 481
LQ332_RS09210 2057582 .. 2057600 -  -5.9  -2.78384   CCCGGGGCGATCACA             TGCCCGA GTAGT TCGGGCC             GCCGCCGCCCTGCGG  46 2
LQ332_RS09205 2056849 .. 2056861 -  -5.5  -3.01712   TGCGGTGGCCGAACA                GCTGC GCG ACAGC                CTGCTGCAGGCCAGT  46 277
LQ332_RS09195 2052541 .. 2052558 -  -8.4  -4.39571   GGCAGAAAGGGAAAA             GGCCAC GCGGAG GTGGCC              CCTCCCTTCTCTGCC  80 273
LQ332_RS09190 2051877 .. 2051899 - -20.6  -3.75153   CGCGGCCAACGCAAA           CGGGCGGGTC ACC GACCCGCCCG           TCCGTGCAGCCGCGT 100 58
LQ332_RS09185 2050651 .. 2050663 -  -5.5  -3.72576   CCTTTCCGCAGGAAA                GGGAT CTG ACCCC                AACGGTGTCCCAATC  60 44
LQ332_RS09180 2048235 .. 2048245 -  -3.2  -2.57344   CACGCTGCTCACAAC                 GCGA ACG TCAC                 CGACAGGCGGGCCTG  39 8
        pnuC 2047592 .. 2047648 - -15.9  -2.89564   CCCTGACCCCATAGA TCCACGCCATGCGTGGATG--GCGTGC CGATT GCCCGCAACAGCCACGCATGGCGCGGC TCTATTGCGTTGCCA  80 27
LQ332_RS09140 2042284 .. 2042307 -  -3.8  -3.06261   GGGGAAGCTGGAATA          TAGCGGCG TTTGTTCC CGGCGCTA           CCAAGCGCTTTCAGC  45 179
LQ332_RS09135 2041908 .. 2041922 -  -9.2  -2.70932   TCTGTGGTGGAAGGA               CGCCAG TGG CCGGCG               AAGGCCACTGGTTCC  56 80
LQ332_RS09130 2040904 .. 2040935 - -10.1  -3.29704   TGTCCAGGAAACAGA      TCCGCTGGCTGCC GTGGGA GGCATGCAGCGGA       CGGCACACCAAGCGG  65 216
LQ332_RS09125 NONE
LQ332_RS09120 NONE
        arsB 2038548 .. 2038560 -  -4.8  -3.60627   TGATGGCACCGCAAA                GCGA GCTGA TCGC                TCGGCTTTCCTCACA  54 368
LQ332_RS09105 2037009 .. 2037045 -   -26  -3.16177   AGCCGACAGACGGAA    TGCCAGCCGGCGCCAC GCGGG GTGACGCCGGCTGGCA    AGCGCAAACAACGTT 100 339
LQ332_RS09100 2036240 .. 2036250 -  -3.2  -3.12803   CATGCAGACGCAACA                 CCTG AAC CAAG                 CCGGCCCGCGAAGCG  43 74
LQ332_RS09095 2035990 .. 2036016 -  -6.4  -2.80816   CCTTCAGTCAGTAGA         CCCGGGCCGTGG GAT CCACGACCAACG         CTGCCTGATGGTTCA  49 45
LQ332_RS09085 2034413 .. 2034436 -  -3.7  -3.62597   CCGACGGCGGAACAA          CGTGCGCAG ATCGAA CTGCGCCAG           CCACTGCAGGATGCC  51 87
LQ332_RS09070 NONE
LQ332_RS09065 NONE
LQ332_RS09060 NONE
LQ332_RS09055 2025297 .. 2025308 -  -3.6  -3.65902   CGGACCCCATTGAAA                GCGC ACGG ACGC                 TTCGGCATGCTCGAC  51 348
LQ332_RS09015 2020674 .. 2020704 -  -5.4  -2.62184   GCGTTGTGCACAGCA       TCACTGTTGCCG ACGACAG CGGCAAGCGTGA       TCCACGTCCCTGTTC  43 39
LQ332_RS09010 NONE
LQ332_RS09005 2018272 .. 2018290 - -17.4  -4.25104   GCGCGGGTACGAAAA             CGCCGCCC AAT GGGCGGCG             TTCTTTTTTGCATCG 100 69
LQ332_RS08995 2015845 .. 2015862 - -14.1  -4.35524   GCTGGAAACGGAAAA             CGCCGGC GCAA GCCGGCG              TTCGTTCTTCTTTAT 100 112
LQ332_RS08930 1997949 .. 1997969 -  -3.9  -4.33754   AAGCACAACGCAAAA            TCCGGCG CGAGATC CGCCGCA            AAGAAGTACTACAAG  67 273
LQ332_RS08880 1989651 .. 1989691 - -10.4  -3.53761   GAACCGTGGGGGAAA CGGAGC-GGGGC-CGGCAAC GGG GTTGCCACGCCCCGGCGCTG TTCAGCTGCCGGATG  69 27
LQ332_RS08875 1988732 .. 1988757 - -18.3  -3.45945   TCCACCCACAACGAA         GAAGGGCGGCC TTGC GGCCGCCCTCC          ACCCGTCAGCCGACT  93 57
LQ332_RS08825 1977969 .. 1978022 - -22.7  -4.03234   TGCCCGGGATAGAAA TCGAACTGGGGTCAGATCCGTTTCCC AGA GGAAAACGGATCTGACCCCA-TGCGC TCAAGAGCGGCCAGC 100 69
LQ332_RS08815 1972820 .. 1972840 -  -6.7  -3.04461   CATTCAGCGCCAACA            CCCTGCACA TCA TGAGCTGGG            CGCACGTGCAGGCAC  48 375
LQ332_RS08805 NONE
LQ332_RS08800 NONE
LQ332_RS08795 NONE
LQ332_RS08790 NONE
LQ332_RS08785 NONE
LQ332_RS08780 1964465 .. 1964487 -  -4.7  -3.09492   GGCCCAACGGGAACA           GCAGGGTCA TGCGC CGCCCCCGC           GGCCGAACAGTGCCT  47 9
LQ332_RS08775 NONE
LQ332_RS08770 NONE
LQ332_RS08765 1959149 .. 1959167 -  -8.8  -3.03159   GGAATTCGTTGAAGA             CACCTGCA AGG TGCGGGTG             CATTCGCTGGGTGAG  55 235
LQ332_RS08750 NONE
LQ332_RS08745 NONE
LQ332_RS08740 1953664 .. 1953688 -  -5.6  -3.99678   ACGTGGACAACGAAA          CCGCGCGTGC CAGCC ACACCCGCGA          TATCCAGCGGCTGGC  63 264
LQ332_RS08725 1949840 .. 1949855 -    -9  -3.18023   CCAGCATCATCAACA              CCGGTT CGGA AACCGG               ACTCTTCGGCAGCAA  56 381
LQ332_RS08710 1947955 .. 1947967 -  -3.3  -3.21416   TACCGCGACGATGAA                GGTGC GCT GCAGC                CGGTGGATTCGGGTG  45 387
LQ332_RS08700 1946747 .. 1946772 - -17.6  -3.17723   GCAGGTGCAACGGAA         CGCGCCGGCA ACCCCG TGCCGGCGCG          GGGTCGGCCTCAGCC  91 35
        gltB 1942150 .. 1942176 -  -7.8  -3.14211   AGCGGCCGGCACTAA         CGTTACGCGGCG CGG CGCAGCGTTTCG         GTCAGCGACTCGATG  55 1
LQ332_RS08690 1940275 .. 1940308 -  -9.4  -2.70932   CGGGCCGCGCAACGA     CCGCTGCCACCGGC GCGGGT GCTGGTGGCCGAGG      ATCATCCGACCAACC  52 373
LQ332_RS08680 1936987 .. 1937001 - -12.8  -4.36914   CTCGGCTCTACAAAA               GCGCGC GCA GCGCGC               GACCCGCTCCTGCTC  95 252
LQ332_RS08660 1933881 .. 1933897 - -12.3  -2.86164   GGGCGAAGCAGTAGA              TCCACGC CAT GCGTGGA              TGGCCACCGCTCAGG  66 36
LQ332_RS08630 1926347 .. 1926375 -  -2.9  -3.53012   TGTGGTGTCCGGAAA        GATCCTGCTGGGC CTG GGCATGCAGGAGC        GCGGGGTGGTCCAGC  49 115
LQ332_RS08615 1923028 .. 1923083 -  -5.9  -3.56643   GGGAGACGCCGTAAA CCCGTCCATGGGGGCTTGGCCGCGGCA TTCA TGCCGCGGAC--GCCCCCGCCACCGGC CCGCCATCCCACGGA  57 114
LQ332_RS08590 1917727 .. 1917763 - -16.5  -3.15579   TGAAGTTCTGAGCAA    GGGTGCAGCGGGCCGGA ACC TCCGGCCCGCTGCATTG    CAGCCTGTAGAGCCG  85 115
LQ332_RS08575 1914464 .. 1914501 -  -2.6  -4.15044   CGCGGCGGCAACAAA  GC-AGCCCTGCAGAAGGC GTTC GCCGAC-GCAGGGATCGC   CGCAGAGCCCTGACC  58 54
LQ332_RS08555 1909209 .. 1909235 -  -9.5  -3.91897   TCGCCCATTCATAAA        GGTAGTGCCGGCC GCT GGCCGGCA--ACC        ATAGGGAAACTGGCA  73 137
LQ332_RS08550 1907831 .. 1907862 -  -4.2  -4.11216   CGTGCAGCTGGAAAA      GCACGACCAGGCCG CCAT CGGCCACTTCGTGG       ACAGCGTGCAGGGCT  63 283
        phhA 1906538 .. 1906573 -  -8.8  -2.54325   GGGCGGCAAACACAT    CGGTCATGCCGCGCAGG ATA CCCGCGCGCCG-GCCCG    CCTCACACGTCGCCG  53 28
LQ332_RS08535 1905384 .. 1905414 -  -8.9  -2.71364   GTACTGCGCGAAGCA      GTGCCG-CTGCTGC CCGC GCTGCAGCCGGCGC       TGGTGCGGGACATCG  52 505
LQ332_RS08485 NONE
LQ332_RS08480 NONE
LQ332_RS08475 1892490 .. 1892507 -  -5.5  -3.57144   CCGTGCAGCTGGAAA             CCAGCAC ATCG GTGCCGA              TGCAGTTCCGCCCCG  57 445
LQ332_RS08460 NONE
         eda 1884206 .. 1884224 - -13.1  -2.88822   TTGCCCACAGAATGA             CGCCGGC GCGAG GCCGGCG             CTTTGATCACGATCA  69 67
        adhP 1883080 .. 1883135 - -15.7  -2.51464   GCACTACCGATGAAT CG-GCATGGCCGCCG-CG-TCCGT GGGAGAGGGGG ACGGAGCGACGGCGGCCATGCACG GAGGGTCAGGCAGCG  77 31
LQ332_RS08445 1882483 .. 1882536 - -17.5  -2.71924   TACCGTCGCTGAAAC GGTAGTGCCGGCCGCT-GCAGG ATGGGAGGTTG CCGGCCAGCGGCCGGCACTCCC TGCAGGCGCTCAGCG  84 35
LQ332_RS08425 1877701 .. 1877711 -  -8.2  -3.14132   GGGCGCTTCTACGAA                 CCCG GCC CGGG                 ACGGCGCGCCAACGT  56 341
LQ332_RS08415 1874239 .. 1874262 - -16.8  -5.02074   CCAGGGCCCAAAAAA          CAAAGGCGCC TTTC GGCGCCTTTG           TCTTCAAACCACTGG 100 50
LQ332_RS08410 NONE
LQ332_RS08405 1871807 .. 1871827 -  -3.9  -2.62184   GGGCGTTCTACAGCA            CTGGCCTCA GCC TGAAACCTG            GCAGCACTGGATGCT  40 384
        rpmH 1852632 .. 1852661 -  -2.8  -2.52896   TCACTGTCGAAGGGA       TTGCGTCTGCCGC GAGGT GCGGCATG-GCAA       TCAGGCGCTCAGGAC  39 26
        rnpA NONE
        yidC 1850328 .. 1850345 - -14.1  -4.13767   CGCCGCATGCGAAAA             GCCCGCC TTGC GGCGGGC              TTTTCGCGTCGATTG  93 127
LQ332_RS08290 NONE
        mnmE NONE
LQ332_RS08280 1844543 .. 1844566 - -10.2  -4.03167   GAAGACGAAGAAGAA          GACGTCGAGC CTTT GCCCGACGAC           GAGCTGGAGCCACCG  75 437
LQ332_RS08265 1841101 .. 1841137 -  -2.9  -3.33815   AGGGGGCGCAACGAA   GGCATGGGCTCTCACC GGCATT GGGAAGAGCCCG-ACC    ATAGCGCTGCGGCCT  47 204
LQ332_RS08260 1839858 .. 1839873 - -11.8  -3.09516   GCCGGCACGACCGAA              GGGCGG TCAA CCGCCC               TGTTTTGCCGCGTAA  69 16
LQ332_RS08240 NONE
LQ332_RS08225 1832496 .. 1832509 -  -8.1  -3.06492   CCAGCGACCTCAACA               GTGCC TGGC GGCAC                GTGTTCATGGCACGC  52 381
        rmuC 1830568 .. 1830582 -  -4.2  -2.78596   CAGGCCGCCAGCATA               CGCACC GGC GATGCA               TGCGGCGTGTCGGCG  42 45
LQ332_RS08210 1830026 .. 1830063 - -18.5  -2.72511   GCTACGTCGGGAAAT   GGC-CGACCAGCATAGCG CCG CGCGATGCCGGTCGTGCC   GGCTGCTGGCCGGGA  87 98
LQ332_RS08205 1829393 .. 1829408 - -11.8  -4.72272   TCGGTGCATGAAAAA              CCCCGC CTCG GCGGGG               TTTTTCTTTTCCGCT 100 70
        recC NONE
        recB NONE
        recD 1816076 .. 1816118 - -24.9  -2.71731   TTGATCGCTGAATGA CGCCGGGTCGGATCCCTCC TGAAG GGAGGGCTCCGACCCGGAG CATGCGTGCCTCGGG 100 88
        folE 1809132 .. 1809150 - -10.2  -3.14132   GCTGGCGGGGACGAA             CAGCCACC CGC GGCGGCCG             CGCGGACAGCCGTGG  63 83
LQ332_RS08120 NONE
LQ332_RS08115 NONE
LQ332_RS08110 1803368 .. 1803419 -   -10  -3.14564   CGATCGGGTCATGAA CCCCGCC-CATGGGTAGTGCCGGCC GCT GGCCGGCATTCCCCATTTGATCGGG TCATGAGCCCCGCCC  63 147
LQ332_RS08100 1801489 .. 1801526 -  -7.6  -3.78775   GCCGTGACGATGAAA  CCGGCCG--GCAGCAGCG CGGA CGCGGCGGCAACGGCCAG   GTGGTGCAGGTAACG  64 197
        egtB NONE
        egtD NONE
LQ332_RS08080 1795739 .. 1795749 -  -2.4  -4.25104   CGTCCTGCATGAAAA                 CGTC CCT GTCG                 CGTTGATCCGTTATT  63 36
LQ332_RS08075 1794906 .. 1794922 -  -7.9  -3.14132   CTTGCCCGGGACGAA              CCTGCGG TAG CGGCAGG              TGCGGGCAGATCTGA  55 54
LQ332_RS08070 1793955 .. 1793979 -  -7.7  -3.07816   TGCGTATGCACTGAA          CCTGGCGGCGA TCA CCGCCGCCATC          TGCATGGGCCGCGAT  52 380
LQ332_RS08060 1790923 .. 1790936 -  -5.9  -3.02511   GGTACTTTGTGAAGA               CGCCC GACA GGACG                ATGCTGTCTTTGCTC  48 42
LQ332_RS08055 1790753 .. 1790771 -  -9.6  -2.91582   CACCTGAGCTACAGA             CCCGGAAA GAC TTTCCGGA             ACAAACTCAAACATG  59 39
LQ332_RS08050 1790537 .. 1790550 -  -6.7  -4.33621   GACTCAATCAATAAA               GAGAC TTGC GTCTC                TCGCCTTAGCCTCAC  75 154
LQ332_RS08045 1787554 .. 1787567 -  -3.1  -2.71924   GACGCTGTCGTAAAG               CCAAG GCAA CTTGA                GGTTATATGGTCAAG  40 32
         rrf 1787292 .. 1787325 - -17.5  -5.40474   ATGCCTGCAAAAAAA     GGAAAACCCCGCTGC GTGA GCAGCGGGGTTCTCG      GGTGTAAACCCTGGC 100 34
LQ332_RS08035 1785258 .. 1785271 -  -5.9  -3.02511   GGTACTTTGTGAAGA               CGCCC GACA GGACG                ATGCTGTCTTTGCTC  48 42
LQ332_RS08030 1785088 .. 1785106 -  -9.6  -2.91582   CACCTGAGCTACAGA             CCCGGAAA AAC TTTCCGGA             ACAAACTCAAACATG  59 39
LQ332_RS08025 1784872 .. 1784885 -  -6.7  -4.33621   GACTCAATCAATAAA               GAGAC TTGC GTCTC                TCGCCTTAGCCTCAC  75 154
LQ332_RS08020 1781892 .. 1781905 -  -3.1  -2.71924   GACGCTGTCGTAAAG               CCAAG GCAA CTTGA                GGTTATATGGTCAAG  40 32
         rrf 1781636 .. 1781657 - -17.3  -5.38054   GCGCACAAAGAAAAA           CCCCGCTGC GTGA GCAGCGGGG            TTTTGGGTATAAACC 100 39
LQ332_RS07995 1775963 .. 1775987 - -19.3  -2.78463   AGGCTGTCGAGCATA          GCGCACCGGCT GTT AGCCGGCGCGC          GTGACGAAAGTCAGT  90 36
        tatA 1775679 .. 1775710 -  -4.2  -3.50588   AGCCGATATCAAACA      CCGC-GACCGCTCCG GAT CAGCGAGGGCTGCGG      TCGTGCTCGTCCTGC  51 10
        tatB NONE
        tatC 1774124 .. 1774136 -  -7.7  -3.35679   GGGCTGCATCGAGAA                CATCG GCG CGATG                ATCGTGTTCGCCGTG  55 370
        glyQ NONE
        glyS 1767541 .. 1767576 -  -2.4  -3.63744   GTGGCGGTCAAAATA    CGCGCCT-CTGTGGCGA TCA TCGCAATCGCAGGCGAG    GATGCCGGCATCGTG  50 171
LQ332_RS07950 NONE
LQ332_RS07945 1761797 .. 1761822 -  -6.1  -2.70932   GCTGGCCGGCAATCA         CCGCAGCCACGC ATG GCGTGGCT-CTA         CTTCTCCCGCCGCCA  46 23
LQ332_RS07940 1759469 .. 1759486 - -12.7  -2.70932   CGTTGGGGGCAACCA             CCCCCAC CAGG GTGGGGG              CCTACGTGGTGCGGG  68 68
LQ332_RS07935 1755786 .. 1755796 -  -4.6  -4.07568   CGGCGTGGGGTAAAA                 CGCC GAG AGCG                 AGCGATTGCGTGGTT  64 176
LQ332_RS07915 NONE
LQ332_RS07910 1748553 .. 1748582 - -22.3   -3.5241   CACGGTCCATAAACA       GAAAGGCCGCGGT CTGC ACCGCGGCCTTTC        CTTCACTGCATGGAA 100 49
LQ332_RS07905 1746970 .. 1747005 - -10.4  -3.02461   TAACCGTCGGCAAGA    CCCCGCAGTTGCCGGCC AGC GGCCGGCA-CTACCGAA    GCAGCAGCTTCAACA  62 18
         xth 1746071 .. 1746092 - -12.9  -2.58249   CAGATGTTCCAGAAC           GGGCCCGGC AATC GTCGGGCCC            CGTTCGTTCAACCGA  67 33
LQ332_RS07890 NONE
        rsmG 1744351 .. 1744404 - -11.8  -3.31792   TCATTATGCGTACAA CCGGCCCCTTGCGGAA-ATCGTGGAT CGCC AACC-CGTTGTTCCACAAGGGGCTGG CGCCGGGAATCAGGG  73 35
LQ332_RS07880 NONE
LQ332_RS07875 1742551 .. 1742577 -  -4.3  -3.15249   CAGACGCGGCAGGAA        CAG-GCCGCATC CCCT GTCGCGGCGCCG         GGCTCAGCCCTGGCG  45 29
LQ332_RS07870 1741711 .. 1741738 -  -3.3  -2.85668   CAGGTGCAGAGGATA        CGCCGCAGGCT CAGAAC AGCCCGAAACG         CTTCCTGGCCACGTT  41 8
LQ332_RS07865 1740641 .. 1740661 -  -5.3  -3.88583   CAAAGGGGGGACAAA            GACCGCGCA TTC TCCGCAGCC            GAGGTTATCCGAAGA  60 68
LQ332_RS07860 1739895 .. 1739914 -  -4.8  -3.20382   CTCCAGATCCATCAA            CGCTCCTC CACC GCGGTGCG             CTTGCTGCGGGTGAT  49 2
LQ332_RS07855 1739454 .. 1739488 - -11.5  -3.01791   ACCGGCCGCCGAACA     TGCAGTAGATCCACG TCATG CGTGGATGCACCGCA     GATCCGGACGGGGTC  65 81
LQ332_RS07850 1737384 .. 1737396 -  -5.5  -3.83026   CCTTTCCACAGGAAA                GGGAT CCG ACCCC                GTGACCGGGACGGAT  62 74
LQ332_RS07820 NONE
        dnaQ 1728971 .. 1728982 -  -7.2  -3.11564   GAAACCGACGCAACA                CGCG CACG CGCG                 GCGGCCCTGGGCGCG  53 123
        rpmB NONE
        rpmG 1727108 .. 1727124 - -10.8  -5.14563   CCGGGCATGAAAAAA              CCCGCC ACAAG GGCGGG              TTTCTTCGCGGGGAC 100 57
LQ332_RS07795 1726421 .. 1726433 -  -6.2  -2.62184   GGCGGCTCTACAGGA                CGGC TCAAT GCCG                CACCGGCACCTCGCA  45 17
         cls NONE
LQ332_RS07785 1724049 .. 1724081 - -11.4  -2.71364   TTACGCGGTGAATCA     GTCATGCGCCGATTG TAGG CCATCGGCG-ATGAC      GGGCCGGGTTGCCGA  62 98
LQ332_RS07780 NONE
        uvrD 1720369 .. 1720412 -   -11  -4.27316   TTTTCCAACGGAAAA GGCTCCGGCCCCAACCACG TGCATTC CGCGA-TGGGGTCAGAGCC CTCCCTGCGGGAGGG  88 61
LQ332_RS07770 1719995 .. 1720008 -  -3.8  -2.52623   TCGGCTCTACAACAG               CCTG TCAACG CAGG                AAGGGCGTGACCTTG  41 16
LQ332_RS07765 1719304 .. 1719321 - -12.7  -2.64155   CTGGCGGGAAAGGCA             GCCGAGC ATGG GCTCGGC              TCTACGACAACGTCG  67 42
LQ332_RS07760 1718591 .. 1718622 - -18.8  -5.24531   ATCCCCCACAAAAAA      CAACGCCGGCGCGCA TCC TGCG-GCCGGCGTCG      GGTCCCCTCCCCGGG 100 65
        polA 1715077 .. 1715107 - -16.2  -5.38054   CGGCACAAATAAAAA       GCCCCGCTGACC AGGGGGA GGTCAACGGGGC       CGGGGAACGGGCACT 100 253
LQ332_RS07745 1714200 .. 1714218 -  -5.8  -3.89957   TTCAACAACGAACAA             TGGGCCGC ATC GCTGCCCT             ACTTCCAGACGCTGT  63 295
LQ332_RS07710 NONE
LQ332_RS07705 NONE
LQ332_RS07700 NONE
LQ332_RS07695 1704800 .. 1704817 -  -9.1  -3.75535   GCACACACACCCAAA             CGCCGAC CAAG GTCGGCA              TCTACCAGCAGCGAT  71 69
LQ332_RS07690 NONE
        cydB 1702166 .. 1702190 - -18.5  -3.03771   TCACATTCCCCAACA          CGGGGCCCGGC ACC GGCGGGCCCCG          CTTTCAACCCATCAG  89 37
LQ332_RS07680 NONE
LQ332_RS07675 NONE
LQ332_RS07670 NONE
LQ332_RS07665 NONE
LQ332_RS07660 NONE
LQ332_RS07655 NONE
LQ332_RS07650 NONE
LQ332_RS07645 NONE
LQ332_RS07640 1694372 .. 1694385 -  -2.3  -2.63913   TACCATGCCAGACCA               CGTTC ATCG GATCG                CAGTCATGGAAGGCA  38 77
LQ332_RS07635 NONE
LQ332_RS07630 1693403 .. 1693417 -  -2.7  -2.78679   CGGCCTCACTCAAAG               CGGCG TGCCT CGTCG               GCGCTGAGGGTGGCC  40 1
LQ332_RS07625 NONE
LQ332_RS07620 NONE
LQ332_RS07615 1689198 .. 1689220 -    -4  -2.53015   AGATCGGTGAACTCA           TCGATCCGGC CCG GCCATGTCGA           TCGATTCGATGCGCA  41 0
LQ332_RS07610 NONE
LQ332_RS07605 NONE
        fabG NONE
LQ332_RS07595 NONE
LQ332_RS07590 1685052 .. 1685086 - -17.9  -3.14132   GGCGGGGTTCAGCAA     TGTGGCGGCGACGTT CAGCC AGCGCCGCCGCCACA     CGGGCGCTTACTTGA  88 33
LQ332_RS07585 NONE
LQ332_RS07580 1681293 .. 1681313 - -12.5  -2.78816   GGAGGTCTCAGGAGA            TTGCCGGCC AGC GGCCGGCAC            TACCTACTGCGGATT  66 54
        mgtE 1677662 .. 1677717 - -42.4  -5.09225   ACGGTACCCAAAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTTTCGTTACAGC 100 34
LQ332_RS07565 1674704 .. 1674736 -  -4.1  -3.72695   AGGCTCGCGAGGAAA     CCTACCGCGACATG GTCAAG CACG-CGCGGCAGC      TGGGTGCCAACGCAA  55 209
LQ332_RS07555 1673380 .. 1673392 -  -5.5  -3.26298   ACCAGCGCAAACACA                TGGCA GAA CGCCA                GAAACAGCAGTGCAA  49 293
LQ332_RS07545 1672196 .. 1672215 -  -3.4  -3.02471   CTGCGAGGACACACA            GGGCTCGC GCAC GTCAGCCC             CCTTCGATACGGAAA  42 19
LQ332_RS07540 1670442 .. 1670463 - -10.1  -2.67667   CGATCGATGAAACAC           CGTGCCGAC CAAG GTCGGCACC            TACCGGACGGTCAGC  59 36
LQ332_RS07525 NONE
LQ332_RS07520 1665621 .. 1665679 - -14.2  -2.66316   GCCTCTACCAGAGCA GCACGTCGCGTCGGGGGTCAGATCCCTTTC TGC GAAAGGGATCTG-CCCCCG--GC-ACATTC AGCGCGGCACGCTGT  71 24
LQ332_RS07495 NONE
LQ332_RS07490 NONE
LQ332_RS07485 1658916 .. 1658956 - -19.7  -2.52896   CGACGCGTGAATCCA  CCGGGGTCGGATCCCTTCC GCA GGAAGGGCTCTGACCCAGG  GCAGCGCATGAGGGC  89 73
LQ332_RS07470 NONE
LQ332_RS07465 1654266 .. 1654290 - -12.2  -3.19157   CAGCAAGCGCATCAA         CAGTCGCGGCA CGCG TGCCGCG-CTG          GGGTGGCAGCCGCGA  68 139
LQ332_RS07435 1648688 .. 1648724 -  -9.2  -2.55544   CGAGTACTGAAGCCA    GGGCACCGGGGGCGGC GTAGG GTCGCCTCCGGTTTCC    AGGGTTGCCGGGCAG  55 153
LQ332_RS07415 1644100 .. 1644117 -  -3.3  -2.55015   ATGTGACTCAACTTA             CACGG-GC AGC GCGCCGGG             GGCGATGGGCAATGG  39 5
LQ332_RS07410 NONE
LQ332_RS07405 1641756 .. 1641769 -  -2.3  -2.62616   TCAGGGTCGACATCA               TGCTC ATGC GTGCA                GGCCCTCTTCGCTGC  38 15
LQ332_RS07400 1640512 .. 1640536 - -18.6  -4.19577   CAATCCTGAAAACAA          CGAGGCCCGG AATGA CCGGGCCTCG          TTTCATATCCGCCGG 100 67
LQ332_RS07385 1638857 .. 1638887 - -16.9  -2.70932   TCCGCCCCGCAATGA       CGACAAGGCCCGG CATGT CCGGGCCTTGTCC       GTTTCAGCGGGCACT  81 29
LQ332_RS07370 1636009 .. 1636047 - -11.5   -2.7263   AGGATCCCGGCAAAC   GGCAGGTCCGCCCGGCG GCAGG CGCGGGGCGGTCGTTCC   TCCATCCTAACCAAG  62 146
LQ332_RS07365 NONE
LQ332_RS07360 1633154 .. 1633170 -    -8  -2.75992   TCTGATCGAAGAGCA              GTCGAC TGACG GTCGAC              TCTACCCGGTCGACT  51 80
LQ332_RS07355 1630936 .. 1630950 -    -7  -2.62463   CCGACCACGCAGAAG               CGCGCC GCC GGCGTG               GCGATCTGGGTACCC  48 249
LQ332_RS07345 NONE
LQ332_RS07340 1629084 .. 1629097 -  -2.3  -3.02511   GGCAGGCTCCGAAGA               GTGGC TATT GCAAC                AGGTAGCCCTGCGGC  41 16
        hemB NONE
LQ332_RS07330 1627388 .. 1627417 - -10.7  -3.06796   GCTGAGCGCATTGAA       CAG-CGCCGACGAT GAA ACCGACGGCGACTG       GCTGGGCCAGGATGG  62 385
        aroE 1625920 .. 1625960 -  -6.7  -2.52635   ACGGTCACCATCAAC  GTCGTGCCGTCCATCGA TCAGTCC TCGCCGGCCAGCACGGC  CGAGCCCTGGCGCAG  47 2
LQ332_RS07315 1625554 .. 1625572 - -17.4  -3.36073   CACAGGGGCGAAACA             CGCCGGGC GTG GCCCGGCG             CCAGCGCTCAGGCGA  93 33
        dinG 1623222 .. 1623280 - -33.6  -4.11216   CCGGCATCTGGAAAA TGGGGACGGAGGGGATTAAGTCGTTT GTGCCTA AAACGACTTAATCCCCTCCGTCCCCT TTTTGCCGGCCAGCG 100 55
LQ332_RS07300 NONE
LQ332_RS07295 NONE
LQ332_RS07290 1618526 .. 1618542 -  -2.2   -4.7497   GGCATCTACCAAAAA              CAGTTG CCGGC CAACGG              CCGGCGTTACCTACC  74 36
        smeA 1606486 .. 1606499 -  -3.1  -3.70925   CGATGAAGAAACGAA               CCATGC GCG GCA-GG               CCTCAGTGCGACTTT  54 28
        smeB NONE
        smeC 1601653 .. 1601700 -  -9.9  -3.86822   GAAGCGCTGCAGAAA CTGGA-GCGCGTGCGCCC-GCAGA CCA TCGGCCAGGCGCA-GCGCATCCCG GGCATGACCCCGGCG  73 253
LQ332_RS07210 NONE
LQ332_RS07205 1596870 .. 1596891 -  -6.5  -2.80816   CTGGCATGCACCAGA           TCCG-CGCCG TGT CGGCGGCTGA           TCGCCCGGTGGTGCC  49 214
LQ332_RS07175 1590105 .. 1590116 -  -7.2  -3.21099   GCTGCCGATCAGGAA                GGGC GTTC GCCC                 TGCCCAGGCCCGGTT  54 7
LQ332_RS07170 1589302 .. 1589332 -  -6.6  -3.14132   GCCCGTTGCGATGAA       GGGAGCGATCACGG CAC CCGCGCGCACACCC       ACACCCGCACCTCTT  51 3
LQ332_RS07165 1588686 .. 1588702 -  -4.3  -3.72592   AACCCCCAGCAACAA              CGATGGC AAC GCCCTCA              TTTCAGCTTCCGCAG  56 23
LQ332_RS07160 1587943 .. 1587962 -  -3.5  -3.28712   CTGGCGCTGTCAGAA            CTGATGC CCAACC GCATCCG             CTCCAACGGCATGAG  47 292
LQ332_RS07120 NONE
LQ332_RS07115 1572579 .. 1572597 - -13.8   -4.3665   CAATGCAAACAGAAA             CGCCGGGC ATC GCCCGGCA             TTTCAGTCACCGCAT 100 55
LQ332_RS07110 1571578 .. 1571606 - -15.3  -3.31263   ACTGCAGTTCGAGAA        TCGAGCCGCGCCT TGA AGGCGCAGATCGA        TGAGAATCTTCCGCC  79 435
        ubiA 1569342 .. 1569373 - -10.8  -3.59698   GTAGGTGACACAGAA      CG-GTAGTGCCGGCC GCT GGCCGGCAATCCTCG      GGATCACACACAGGC  71 284
LQ332_RS07085 1567779 .. 1567793 -  -4.9  -3.53012   GCGTGTGGTCGGAAA               CCCGC GCTGA ACGGG               GCTGGTTTCACGACG  53 64
LQ332_RS07080 1567341 .. 1567369 -   -16  -3.61398   GGCGTGCTGGAATAA        GCGAAGCCCCGC GCGCG GCGGGGCTTCGG        GGGTTACCCAGGGTG  90 51
LQ332_RS07070 1565956 .. 1565975 - -11.4  -2.90075   CTTGGGTGAATCACA            CGACCGCC CGCA AGCGGTCG             CTCAGGGGTCAGATC  64 34
LQ332_RS07065 NONE
LQ332_RS07060 1563452 .. 1563475 - -19.6   -4.7629   CCATCAACGGAAAAA          GCCGGCCGGA TCGC TCCGGCCGGC           CTCCTTTACTACACG 100 59
LQ332_RS07040 1559785 .. 1559798 -  -6.7  -3.24032   ATGCGGCAACCAAGA               TTGGC CCCT GCCAA                GGCTCATCCGTAGAT  54 97
LQ332_RS07035 1557255 .. 1557272 -  -3.3  -3.40403   TGCGGTCCATCAGAA             GCTCAGC CGAT ACTGCGC              GTACAGATTGGCACC  47 2
LQ332_RS07030 NONE
LQ332_RS07015 NONE
LQ332_RS07010 1551321 .. 1551337 - -11.5  -4.34402   CTGCTCACAGGAAAA              GCACGCG CTG CGCGCGC              GAGTCGACTGACAGT  90 85
        yidA 1549251 .. 1549267 -  -5.8  -2.91383   AGGTGCAGGGAGAGA             GCG-GCG CAGG CGCACGC              CCAGCGCGTTGCAGC  47 363
LQ332_RS06995 1546857 .. 1546869 -  -9.1  -3.53012   CCTTTGCTGCGCAAA                GGGGT CTG ACCCC                GATCACGGAGGGGCT  65 61
LQ332_RS06990 1546364 .. 1546384 -  -2.3  -2.79831   GGAATTCTCAGCAGA            TGCGCGGTC AGC GGCCGCGTC            TGAACATTACACCTC  40 12
LQ332_RS06985 1545605 .. 1545622 -  -9.1  -3.16564   CGGTGACCGCAGCAA             CCGCTGC CTGT GCAGCGA              CGAGCGTATCAACCG  56 454
LQ332_RS06975 1543027 .. 1543049 -  -3.3  -3.73107   GTACGAAAGGCCAAA           GAGCGCAGC GAGAA GCTGAGTTC           CTATGAAGCCTTTCA  54 50
LQ332_RS06970 1541877 .. 1541905 -    -8  -3.40403   GTGGGCCTACCAGAA        GCTGCAGCCGGC CGATT ACCGCCTGCTGC        ACAGTGATGCGCGCG  58 497
LQ332_RS06955 1540124 .. 1540145 -  -6.5  -3.18383   ATGCCTATCCATCAA           CGC-GCAGGC TCC GCCTTCAGCG           CGCTTGACCCCCTGC  54 0
LQ332_RS06950 1539229 .. 1539239 -  -6.8  -3.35992   ACGCAGGGGAAGCAA                 CGCA GGG TGCG                 CCTTCCCTTCAGAAG  55 485
LQ332_RS06945 1537906 .. 1537922 -  -2.2  -3.56544   ACCACCAATAATGAA              CGGGAC AATTA ATCCCA              AGCTTCACCGCGAGC  50 56
LQ332_RS06940 1536612 .. 1536639 -  -8.4  -4.48987   TTGCCACAACGAAAA        TTGAAGCCGCAC CGCA ATGCGGCCTCGA         CAACCGCAATGCCCC  84 294
LQ332_RS06925 1534735 .. 1534762 -  -3.2  -3.07344   GCATCCGCGAACACA        TCCATGCCGGCA TCAC CGCCGGGCTGGC         GGGCGCTTACGACGA  43 410
LQ332_RS06910 1532142 .. 1532163 - -17.3  -5.30616   TGATCCAAACAAAAA           CCCGCGCTG GCGA CAGCGCGGG            TTTTTTCATGCTCCG 100 78
        speA 1529199 .. 1529213 -  -3.4  -2.78384   GTGCCGTCCATCACA               CCAGCG GTT CGTCGG               ACAGGTAGGTGTATC  40 6
LQ332_RS06895 1528626 .. 1528665 - -10.6  -3.05596   CACGTGGTCAGGGAA  CGCCCTGCGGAAGCCGGCC AGC GGCCGGCT-CTACCAAGCG  CCAATCCGACCGGTC  63 196
LQ332_RS06875 1524525 .. 1524542 -  -3.3  -3.65046   CGGCTATTCGAAGAA             CGGTGGC AACA GCCACTA              CAACGCGGCCACGCT  51 352
LQ332_RS06855 1521912 .. 1521960 - -12.4  -3.36073   CAGAGGCGGTAAAGA GCGGAT-GCGCGGCAGCAGCGGCC TCG GGCCGCT-CGACCGCCCCATCGGC AGTCCTCAGTACTTC  73 31
LQ332_RS06850 1518962 .. 1518974 -  -4.7  -3.38272   CATGATCACCCAGAA                GGGGC GCC GCACC                CGCGCCGGCCAGTAC  49 479
LQ332_RS06835 1514016 .. 1514050 - -23.8  -2.54523   TGATAGTGGAATGGA     GCCAGATCCCTTTCCC AAC GGAAAAGGGATCTGGC     CCCGAGGGTCCACGG 100 43
LQ332_RS06825 NONE
LQ332_RS06820 1510916 .. 1510938 -  -9.9  -3.92324   TTCGCGAAGATCAAA          GGCGGTCGAG CAAG CTCGACC-CC           TACCAGGAGCAAAGT  73 104
LQ332_RS06815 1510376 .. 1510394 - -17.4  -3.45571   CCTGTGAAACACGAA             CGCCGGGC ATT GCCCGGCG             TTTTTTTATGCCCGC  93 59
LQ332_RS06790 1505210 .. 1505233 -  -3.8  -3.60475   AACTTGCATCTGAAA          CGATC-CAGCC AGC GGCCGGGACCA          AGCTGAATGGGGATC  53 39
LQ332_RS06785 NONE
LQ332_RS06780 1502861 .. 1502877 -  -7.9  -2.78384   GGGGCGCGCAGTAGA              TCCGCGC AAG GCGTGGA              TGCGCCTCAGTGCCG  51 90
LQ332_RS06775 1501132 .. 1501147 -  -6.8  -3.58522   AGCAGGACCTTGAAA              CCGCGA TCCT TCGCGA               GATGCAGGGCTTCCT  57 484
        hppD 1498335 .. 1498354 -   -10  -3.85698   TGGGGGCTCCAGAAA            TGGCCGGCC AGC GGCCGGC-A            CTAGCATTCGGACAG  75 77
        hmgA 1496600 .. 1496634 -  -6.2  -3.29461   GAACCGCCGCCACAA     CCGCACCGCCGCCACC CGC AGCCGCGGCAGCACCG     GCGCCCGCCACGCCG  52 413
LQ332_RS06745 NONE
LQ332_RS06740 1494499 .. 1494511 -  -6.2   -3.3095   AGACACCCCGCAGAA                CCGG TAGTG CCGG                CCGCTGGCCGGCAGT  53 94
LQ332_RS06695 NONE
         rpe NONE
LQ332_RS06685 1484866 .. 1484888 - -16.3  -3.08133   CACGCATGCAGCGAA           GCCACGCCC GTGAT GGGCGTGGC           TTTTTTTTGCCCGGC  85 75
        yegS 1483665 .. 1483681 - -10.9  -2.80699   TCGGAACGAAGAGCA              GTCGACT GAC AGTCGAC              TCTACCCCCTACCCA  64 34
        trpE NONE
LQ332_RS06670 NONE
LQ332_RS06665 NONE
        trpD NONE
        trpC NONE
LQ332_RS06650 1477640 .. 1477650 -  -2.4  -3.35522   CAAGCGGGTGAAAGA                 GCGC TGG GTGC                 TGGTGGCCGTCGGCG  45 222
        speD 1475142 .. 1475167 - -20.5  -5.07652   CTTGGGAAAACAAAA         CGGCCCGGTGT TTTC ACACCGGGCCG          TGGGTCGGCACATCA 100 131
        sugE 1474365 .. 1474380 -  -2.4  -4.24342   CGGCCCAGGAAGAAA              CCGACC ACCT GGCCTG               GTGCGCCACCCGGCT  61 430
        rplM NONE
        rpsI 1472989 .. 1473016 -   -20     -2.84   ATGACCCCAGAACGA        CAAAAGCCCGGC CGAA GCCGGGCTTTTG         CTTTTCCATCCAGCG 100 74
LQ332_RS06600 1471741 .. 1471778 -  -3.5  -3.76125   CTATTCCAATGGAAA   CGAGAATGGTTGTCAATC AGA GACCTG-AACCATTCTCG   ATACCGTTCAGGCTG  54 41
LQ332_RS06595 1471445 .. 1471466 -  -8.6  -3.63895   GTGAAGGATGCGAAA           GCGCGGCG TCATTG CGCCGCGA            AAGAACCGCTCAGGC  65 35
         bfr 1470590 .. 1470607 -    -7  -3.01712   GGTCTTTCTGGAAGA             TGCACC GGTCAT GGTGCA              GCAGCTGCAGCAGGC  52 280
LQ332_RS06570 NONE
LQ332_RS06565 NONE
        erpA NONE
        nudC 1463213 .. 1463237 -    -7  -3.06696   GGTGGCGGCAATACA          GCGGCCACCA CGGCC CGGCGGCAGC          GTCGGCTCAGCCCTG  51 32
        ampE 1461943 .. 1461962 -  -8.6  -4.53703   AAAAGAAGATCAAAA            GCGGAAGCG GAT CGCTT-CGC            TACGCTCGCTCGGAG  84 274
LQ332_RS06505 1445149 .. 1445159 -  -3.2  -4.70319   TCAGGAAAATCAAAA                 TCAG AAG CCGA                 TCCTTCAGACGTTCA  72 453
LQ332_RS06500 NONE
LQ332_RS06495 1443831 .. 1443860 -  -2.8  -4.07568   CTGGCCCCCTGAAAA       CGGACGCCATGAA GCCGT TTCA-GGCGGCAG       TCCGGAGCTGCCGGG  60 15
        queF 1442640 .. 1442678 - -12.2  -2.52795   AATCGGGGGAATGGA   CGCCCGGTAGTGCCGGCC GCT GGCCGGCTGTGCCAGGGG   AATCGGGCCCTGGCC  64 156
LQ332_RS06485 NONE
LQ332_RS06480 1441614 .. 1441637 - -18.2   -5.4505   CGGCGCAATAAAAAA          GGACGCAGCC TCGC GGCTGCGTCC           ATCGTGAGCCCTGCC 100 60
LQ332_RS06475 1439044 .. 1439069 - -14.7  -5.12707   CCAAAGCCCAAAAAA         GAAACCCGCGC CGAA GCGCGGGGTTC          CAGTGTCACCACCGA 100 52
LQ332_RS06470 NONE
LQ332_RS06465 NONE
LQ332_RS06460 NONE
LQ332_RS06455 1436381 .. 1436401 - -12.5  -2.53263   TCGAGTGCGAAGGTA            GTGCCGGCC GCT GGCCGGCAG            CACCTGGGCCGTCGA  64 82
        aceK NONE
LQ332_RS06445 1433547 .. 1433567 - -16.1  -3.39803   TACGCAGACTGAGAA            GCGGCCGGC CTG GCCGACCGC            TTCACGCACGCCGGG  88 42
        rhlB 1427168 .. 1427191 - -13.2  -3.56092   GCACTACCGTTCAAA          GCCACCCGACC AGC GGTCGGGT-GC          TACCCGCTGATCGGC  81 49
        ftsE NONE
        ftsX NONE
LQ332_RS06410 NONE
         ung 1423803 .. 1423844 - -10.1  -3.06796   GCCGATTCCAGTCAA GCGGAGCTGAACGGGCC GCTCTGAA GGCCCATTCAGGCCCGG  GGACGTTGCCCGGTG  63 66
        rpoH 1422680 .. 1422708 - -23.3  -4.19704   GAACGCCACCGAAAA        GAAAAGGCCCGGC AGT GCCGGGCCTTTTC        ATTGCTTCAACGCCA 100 48
LQ332_RS06385 1418845 .. 1418862 -  -2.5  -3.14344   TATCTGCTTGATTAA             TTCGGCG AAAC CGCCGCT              TCCCGCAGTCCGCGA  42 4
LQ332_RS06380 NONE
LQ332_RS06375 NONE
LQ332_RS06370 NONE
LQ332_RS06365 1414637 .. 1414659 -  -2.6  -2.99649   AGATCGCCAGATACA           TCCAGCACGA AAC TCATGCACGA           CCTCCATTCGGCGCC  41 16
LQ332_RS06360 1413420 .. 1413436 - -12.3  -2.83715   GGCACTACCAGTACA              TCCACGC CAT GCGTGGA              TGCATCCCCGGCAAT  66 250
LQ332_RS06340 1410064 .. 1410079 -  -2.5  -2.50816   GCCCCATGCAGGAAT              CGACG GTAATT CATCG               CCCGTCCCTCTTTCC  37 20
LQ332_RS06335 1409614 .. 1409633 - -16.4  -3.71378   GACTGGACACGGAAA            GGGCGGGG ATAT CCCCGCCC             TTTTCTGTTGCTGTG  91 95
LQ332_RS06310 1404985 .. 1405026 - -12.1  -3.30124   GGCGATGCTGGACAA CCCGGC-ACTGCTGCGGCAG CTG CTGCCGGCGCTGGAGCCGGG CGTGCCGCTGCCCAG  70 120
LQ332_RS06300 NONE
LQ332_RS06295 1402969 .. 1402988 -  -6.4  -3.54029   CCGCAGCAACCAGAA            CGCCCT-GC TTG GCGAGGACG            GCGTGGATGGCCTGA  57 236
LQ332_RS06285 1401544 .. 1401580 -  -2.9  -3.89346   CGGCCATGTGACAAA   CGCTGAACTGGCGCGGC AGCTG GCCA-GCCCGT-CTGCG   GCCCCGCCGCGGCAT  56 96
LQ332_RS06280 1400058 .. 1400097 -  -2.6  -2.56095   TCGAGATCGAAGGTA  CCTACCTGGTGCGCGAGG ACAG CCCTGCACGGCAGGTTGA   CGACCTTGACCGCGA  38 427
LQ332_RS06270 1399279 .. 1399305 -  -6.5  -3.14132   GGGCGGCGTCATCAA        CAGCCGCCGGGC ATGG GCTCGGCG-CTA         CGGCATCCTGCGCGC  51 23
LQ332_RS06260 1395603 .. 1395637 - -21.4  -2.75183   ACGTGTACTGAACGA     TTCGGTGGTGCCGGCC AGC GGCCGGCACCACCGGC     ACCACCGGCAGATTC 100 39
LQ332_RS06230 1386904 .. 1386923 -  -5.6  -3.36515   GGTCAGGTTGAAACA            GGTCGCGC GGAG GCTCAACC             GATGACGGCGAGCAC  53 20
        groL 1385105 .. 1385122 - -14.1   -4.8622   CCGCGCAACGAAAAA             CCCCGCC TTGC GGCGGGG              TTCTTCTTTTGCAAC 100 90
LQ332_RS06220 1384165 .. 1384192 -  -7.7  -3.01791   ATGCGGTGGGCAACA        CGCTGGTG-TGC GTGGA GCGGCACCAGCG        CTGCGTGGTCATCCT  52 274
LQ332_RS06205 NONE
LQ332_RS06200 NONE
LQ332_RS06195 NONE
LQ332_RS06190 NONE
LQ332_RS06185 1378034 .. 1378054 -   -14  -5.21709   GGCGACATGAAAAAA            GCCGCCAG GTTCG CTGGCGGC            TTTCGGGAATGCGTC 100 248
LQ332_RS06180 NONE
LQ332_RS06170 NONE
LQ332_RS06165 NONE
LQ332_RS06160 1374489 .. 1374511 -  -8.4  -3.72576   CCTTTCCGCAGGAAA           GGGCACTGAC CCC GTCAACACCC           TCCACGCATGGCGTG  67 51
LQ332_RS06150 NONE
LQ332_RS06145 1371498 .. 1371509 -  -3.6  -3.72576   CCTTTCCGCAGGAAA                GGGC TCTG ACCC                 CGAACGCCTTCGCTT  54 39
LQ332_RS06135 NONE
LQ332_RS06130 1367216 .. 1367247 -  -2.2  -3.16881   GACGGAGGGGATTAA      GTCGCATTCGGC ACTGACTG GCCTGATACGAC       TTAATCCCCTCCGTC  42 49
LQ332_RS06125 1365624 .. 1365650 -  -9.3  -2.82516   CGTGGTACCAGCATA         GCCGGTGCCGC GTGAT GCGGCATCGGA         CACAAGTCAGGGGAT  58 74
        sppA 1363619 .. 1363638 - -16.4  -4.90266   CCCATCAACGAAAAA            CGCCCGGC CTGA GCCGGGCG             TTTTCATTCACTACT 100 49
LQ332_RS06110 1362293 .. 1362303 -  -4.6  -4.07568   CGCCTCGCCGGAAAA                 CCGC GAC ACGG                 CACGTGGCGAGCGCG  63 184
         def 1352050 .. 1352070 - -15.4  -4.93877   GTGCAGGAAAGAAAA            CGGCGCCG TCGGC CGGCGCCG            TAGAGCCCGCGCGCG 100 84
         fmt NONE
        rsmB NONE
LQ332_RS06045 1347929 .. 1347955 -    -8  -3.61894   AATCGGCTGGAAGAA        CGGGAACGGCC GATGCA GGCCA-TCCCG         GCCTGCTGTTTTACT  63 88
LQ332_RS06040 1346081 .. 1346134 -  -8.9  -3.05384   CGCGCGGCCATCGAA CAGGCCCGTGAAGCGGGCTTCGCCGG TCATG CCGGCTA--CC-GCTTCGCGCGCCTG TCGGAGTACTTCGGC  57 500
LQ332_RS06030 1344443 .. 1344461 - -14.6  -3.29511   CTCACCGCTGGACAA             GCTGCTGG GTA CCAGCAGC             CTGCAACTGGATACC  79 279
         dtd 1339809 .. 1339846 -  -9.9  -2.67515   CGTAGCATTATACCA  GCCCG-GGG-CC-CCGCC TGCCG GGCGGTGGTCCCGCAGGC  TCAGGGCCGGAGAAG  56 26
        rpoD 1337856 .. 1337872 - -10.8  -5.45802   TCCGGAAAAGAAAAA              CCCCGC ACCAG GCGGGG              TTTCTCAACGCTTCA 100 55
LQ332_RS05995 1336860 .. 1336874 -  -2.7  -5.14563   GGCGGCACGAAAAAA               GCGCC GGGGT GGAGC               CTGAGTGCCAATTTC  83 42
LQ332_RS05990 1336177 .. 1336216 - -14.2  -3.04461   CAGGCAGCGGGAAGA  CGGCA-TGGCGGCAGTCGC GCT GCGGCTGCCGCTGCTGCCG  TGCAGGCATGCCGTT  76 46
LQ332_RS05980 1334937 .. 1334972 - -15.4  -3.08966   GGAAAGCTGATCGAA    GATGTCCGGGAAGGGC GTCG GCCTTTCCCGGACGCC     GGCGGCGCGCACCTC  82 78
LQ332_RS05965 NONE
LQ332_RS05960 1332485 .. 1332496 -  -5.8  -3.01712   TGCTGCGGCTGAACA                GCAG CGGG CTGC                 TCGACCCGTACCCAC  48 152
LQ332_RS05950 1330974 .. 1330999 - -14.7  -6.09133   TACCGCAAAAAAAAA         TGCCGGAGCAG CGTA CTGCTCCGGCT          TCGGCGACTCAGCGG 100 60
LQ332_RS05940 1326772 .. 1326788 -  -9.4   -3.2963   ATCACTCCTTGATAA              GCCTGG TGAGC CCAGGC              CAGGCCACCATAGCG  62 81
LQ332_RS05935 1326505 .. 1326527 -   -17  -3.71284   TGCGCACGAACAGAA           GAGCCCCGTC ATG GACGGGGCCC           GTCATCAGCCGATCA  91 50
LQ332_RS05930 NONE
LQ332_RS05920 1323401 .. 1323420 - -16.4  -3.16564   GCTCCATCCTAGCAA            GGCGGCGC TCAC GCGCCGCC             ATGTAGCGCGGCCAT  85 463
LQ332_RS05910 1321816 .. 1321863 - -11.8  -3.01712   TGCCGCGCTCGAACA GCGCCCCTTCGCCCAGCGCCTGC AGG ACGCGCGCTGG-CGCTGAGGCGC TACTGCTCGGCGGCC  68 25
LQ332_RS05900 NONE
LQ332_RS05895 1319365 .. 1319377 -  -7.7  -2.70932   GCCGCCCGCCAACGA                GGTTG AGG CAACC                CGCCTGGATATTCCT  51 86
LQ332_RS21180 1316660 .. 1316679 - -16.4   -2.5602   CAAGGATGCAACCGA            CGCCCGGC CCCC GCCGGGCG             TCTTCATTTGTGCGA  81 41
LQ332_RS05875 1315464 .. 1315477 -  -4.5  -3.40073   ACCTGGATGAAGGAA               GCCAG GAAC CTGAC                CACCGGCCGCGACCT  52 390
        mdoH NONE
LQ332_RS05860 NONE
LQ332_RS05855 NONE
LQ332_RS05850 1308463 .. 1308475 -  -5.5  -4.25104   TTTTCCGCAGGAAAA                GGGAT CTG ACCCC                TCTTCCCCCACCCGA  70 368
        hemC 1307141 .. 1307171 -   -19  -3.97689   TACAAGTTCAAATAA       GCAGAACGGGCGCC CAG GGCGCCCGTTCCTC       TTTCGGTAGTGCCGG 100 112
LQ332_RS05830 NONE
LQ332_RS05825 1303554 .. 1303589 - -10.4  -3.02511   GTGATCTTCGCAATA    CCCGGTGATTGCCGGCC AGC GGCCGGCACT-ACCGTA    CGGTCAGAACGCCGG  62 218
LQ332_RS05805 NONE
        aceF 1296642 .. 1296652 -  -4.6  -2.62184   CGGTGCGTTACAGCA                 GCAC GCG GCGC                 ATGTCGGCCAGTACC  43 7
        lpdA 1294674 .. 1294691 - -10.5   -5.4833   GCAGCCAACAAAAAA             CCCCGGC AGAA ACCGGGG              TCTTCGTTCGGAACG 100 52
LQ332_RS05785 NONE
        atpB NONE
        atpE 1291175 .. 1291194 -   -15  -3.59979   GGCCTTCATCCGAAA            CCGGGTGC TTCA GCACCCGG             TCGTCTCAAACCGCT  87 44
LQ332_RS05770 NONE
LQ332_RS05765 NONE
        atpA NONE
        atpG 1287548 .. 1287568 -    -9  -3.33696   TGTGCTTTGAACGAA           CGCGGTCAG ACTG CTG-CCGCG            CCGCCGACGATTTCG  60 10
        atpD NONE
LQ332_RS05745 1285531 .. 1285549 - -13.1  -5.27335   CGCGCCAAACAAAAA             CGCCGGC ACGGG GCCGGCG             TTCTCATGGATGCTG 100 49
        glmU NONE
LQ332_RS05730 1282977 .. 1282993 - -12.3  -3.10344   GCTTGATCGAATAGA              TCCACGC CAT GCGTGGA              TGTGCCGAGCCAGGT  69 47
        glmS 1273099 .. 1273117 - -13.1  -4.05788   CCGCTGCAAACGAAA             GGGGGCC ACGCG GGCCCCC             TTCGCTTGCAGCGTC  89 59
LQ332_RS05685 1272225 .. 1272247 - -19.2  -3.33696   GGCGCCGTGAACGAA           GAAGCCGGGC AAT GCCCGGCTTC           TCTGCATCCAGCGCT 100 49
LQ332_RS05670 1269876 .. 1269892 -  -3.7  -2.66733   CCTGAACGGAGAGCA              GTCGA GCAACCG TCGAC              GCTGCCCAGCCGATG  42 64
LQ332_RS05660 1266681 .. 1266713 -    -7  -3.14132   CTTCCTGTGCAGCAA     GCACGCGCT-GCCGGC GCT GTCGGCGAACGC-TGC     GGGCGCGATCATCAA  53 501
LQ332_RS05645 NONE
LQ332_RS05640 1262891 .. 1262901 -  -2.4  -2.70932   TGCCGCGGCGAACCA                 GGCG CCG CGGC                 AACGCATCGTTTCAT  38 37
LQ332_RS05635 1261387 .. 1261416 - -12.1  -2.95789   AGCAGATGAACGACA       TCCTGCGCGCACGC CTG GC-CGCGCGCGGGA       TCGACGTGCTCAGCC  64 329
LQ332_RS05625 1260030 .. 1260068 -  -8.7  -3.05384   GGCTGGGTGACGGAA  GGGGGCGTG-CAGCCTAC CAGC GCAGGCGGTCGCGCGCCC   GCGCCATGGGCCAGA  57 168
LQ332_RS05620 NONE
LQ332_RS05615 1258283 .. 1258301 -   -16  -2.74012   GCACTACCCGAACGA             TGCCGGGC GCC GCCCGGCA             CTCTGTTATCTGCGG  78 31
LQ332_RS05610 NONE
LQ332_RS05605 1257092 .. 1257104 -  -9.1  -2.54687   TCAACGAGTACGAAC                TGCGC GAC GCGCA                CAAGGTCGGCATCAC  51 433
LQ332_RS05595 1256370 .. 1256388 -  -3.1  -2.61912   CCAGGCAGTCATAAG             CCGTG GAACGCTAG CACGG             AATGTCGTGGCCTCC  39 54
LQ332_RS05590 1254219 .. 1254238 - -10.6  -4.87803   TACCGGCAAAGAAAA            GCGCCGCC CTCG GGCGGCGT             TTTCCGTTCTGCTTA 100 38
LQ332_RS05580 1250546 .. 1250585 -  -6.8  -2.90194   ATGGCCGCAAGGATA  CCGGTTCGGGGCGCCGGG AATG CCCGGCACCCCTTCACGC   TCAGGGCTGGGCGAT  49 26
LQ332_RS05575 1250037 .. 1250048 -  -3.6  -2.78596   CATGCCCCGAGTATA                GCCA TTGG CGGC                 TGAGCGGTTGGTGCA  40 84
LQ332_RS05570 NONE
        dapF NONE
LQ332_RS05560 NONE
        xerC 1247295 .. 1247315 -  -8.2  -2.52464   GCGCCCTTCAAGCCA            CCCGCGAC CGGCT GCCGCAGG            GGCAACGTTCAGCTT  52 34
        hslV NONE
        hslU 1245128 .. 1245145 - -14.1  -5.19328   ACCGCACAAGAAAAA             GGCCGCC TTGC GGCGGCC              TTTTCTGTTGCAGCG 100 90
        smeD NONE
        smeE 1238852 .. 1238879 - -16.4   -2.8661   CACATCAAGCAAGCA        GTAGGTGCCGGCC AGC GGCCGGCA-CTAC        CGATTCGCTTACGTC  84 34
        smeF 1237349 .. 1237376 -   -12  -3.21218   ACCCTCGATCATCAA        GGTAGAGCCGGCC GCT GGCCGGCTGT-CC        TTCAGCCGCGCTCGT  71 27
        ubiE 1234553 .. 1234587 - -16.5  -2.62263   ATGGCGGCCACAGCA    CCG-GCAG-TGCCGGCC GCT GGCCGGCATCCGCACGG    ACGATGACCGGGCAC  81 82
LQ332_RS05490 1232485 .. 1232502 - -12.7  -5.37345   TGCAACCACAAAAAA             CGGCAGG TTTC CCTGCCG              TTTTTTGTTTCGCGC 100 53
LQ332_RS05480 NONE
LQ332_RS05475 1229543 .. 1229580 - -23.7  -2.74012   CGAGCAGTTCAAGCA   GCAGTTCGGTT-ACGCGC TGG GCGCGTAAACCGAACTGC   CCGCGCATTCCACCT 100 291
LQ332_RS05460 1227219 .. 1227277 - -11.7   -2.6732   GCGGAAGGGAAACAC GCGGACGCCCCGCCGGTGC-CGGCCCGCC TTCAC GGCGGGCCGCACCCCGGAAGGGCG--CG- GCGGGCAGGAACGGC  62 50
        mreC NONE
        mreD NONE
        mrdA NONE
        rodA NONE
        rodA 1220827 .. 1220875 -  -5.8  -2.52676   GACGCCGTGAACCCA TCCATGGGGGCTTGGCCGCGGCA TCCA TGCCGCGGACAC-CCCGCACTGC CCACCCACCCGGCCG  45 408
        mltB NONE
LQ332_RS05425 1217788 .. 1217804 -  -7.9  -2.60392   GAGGGTGGAACGAAG              CGGCCAT TGT AAGGCCG              GGCGAGCCTGGGCCG  50 61
LQ332_RS05420 1216469 .. 1216496 -   -20  -3.34398   CGGCCTCCCGAAACA        GAAAAGGCCGGC ATTT GCCGGCCTTTTC         GTTCACCACGCCGGG 100 48
LQ332_RS05410 NONE
        lipB NONE
        lipA 1212567 .. 1212579 -  -6.9  -4.07568   GCGCTCGGTGGAAAA                CCAGC CTA GCCGG                GCCGGTGTAGCAAAT  68 129
LQ332_RS05395 1210237 .. 1210257 - -19.7  -4.45771   ACCCCAAAATAGAAA            GGGGCCGGC AAT GCCGGCCCC            TCGGGGATCGCGTGG 100 50
LQ332_RS05390 NONE
LQ332_RS05385 NONE
         gnd 1207120 .. 1207150 -  -8.3  -3.31144   CCTGCACCCGCAGAA      GCGGTAGTGCCGGCC GCT GGCCGGCA--ACCTC      AACAGCAACAGCAAA  60 197
LQ332_RS05370 NONE
LQ332_RS05365 NONE
LQ332_RS05360 NONE
LQ332_RS05355 1201492 .. 1201524 - -12.8  -2.79796   GTTGATCCCACCACA     CAGGG-A-CGCCGGCC AGC GGCCGGCACTACCCTG     GCATCAGCCCAGCGC  69 29
LQ332_RS21175 1201140 .. 1201167 -   -12  -2.94747   TGATCCCACCACACA        GGGA-TGCCGGCC AGC GGCCGGCACTACC        GTGGCATCAGCCCAG  68 214
        folK 1198911 .. 1198937 -  -2.1  -2.62735   ACATCGCCTACACCA         TGGCCAAGGCC GCGCT GGAGATGGCCA         CCCGCGCGCTGGCGC  38 327
LQ332_RS05335 NONE
LQ332_RS05330 1196793 .. 1196826 -  -5.9  -3.55444   CGGTTAGGTGCCAAA     CTGGGTTGGCACG CCTTTACC CGCGCCAGCGCAG      CAGCAGGTCGCGCAT  55 8
LQ332_RS05310 NONE
LQ332_RS05305 NONE
LQ332_RS05300 NONE
        nagA NONE
LQ332_RS05290 1184149 .. 1184165 -  -5.8  -3.59979   GCTGGTGATCCTAAA             CG-CCCG TAAG CGGGACG              CCGAGGTGGCCCTCG  57 247
LQ332_RS05280 1179424 .. 1179435 -  -2.2   -3.4052   GCCGAAGCCAACGAA                CAGGC GCC GCC-G                TCGGCGTTCTTCGCC  47 414
LQ332_RS05270 NONE
LQ332_RS05265 NONE
LQ332_RS05260 NONE
LQ332_RS05255 NONE
LQ332_RS05250 1175829 .. 1175839 -  -6.8  -3.14211   ACCCCGCCGGAGGAA                 TGGC CGC GCCA                 CATCATGCACGAGCA  50 511
LQ332_RS05235 1172027 .. 1172042 -  -6.8   -3.9392   CGGCACTGGAAACAA              GGTCCC AGAT GAGACC               ATTGCAGACCCTGTC  63 257
LQ332_RS05225 1168112 .. 1168133 - -13.7  -2.78384   GGCGTTCTGATCAGA           CGCGGGGTA CGAC CACCCCGCG            CCTGTTGAGCCGAGC  71 102
LQ332_RS05205 1163570 .. 1163599 - -10.7  -2.80816   GCGCCATCGACCACA       TCCTGGTCAGCAG CGGA CTGCTGACCCGCA        CCGTGGAAGCCGTAC  59 219
        yihA 1159180 .. 1159215 -  -6.9  -3.05384   CCCGCTGGCACGCAA   CGC-GGTGG-CGCCG TATCAGGC CAGCGGCCACCTGCG    CACCTTCAGCCCCGG  48 444
LQ332_RS05160 1155090 .. 1155118 - -21.9  -4.13014   CGCAGATGTGGAAAA        GAAAAACCCCGGC AAT GCCGGGGTTTTTC        TTCTGGTAGTGCCGG 100 68
LQ332_RS05150 1152721 .. 1152764 -  -7.3  -2.82623   CCTGCTGCAGAACGA GGCTGGCAGCGC-CGCCACCG AAGA CGGCGACGTGCGC-GACTACC AGCGCCACTGGACCC  50 283
LQ332_RS05140 1151401 .. 1151416 -  -3.2  -3.57561   GGGGAACTGGGCAAA              CGC-GGC CTG GCCTACG              TGCATCTCAACGACA  51 371
LQ332_RS05130 1149284 .. 1149309 -    -6  -3.61178   CCGACGCATTCGAAA         CGGCGATGCG CGAGAT CGCCTCGCGG          CCCGGCACCCAGATG  57 289
        frmR 1148072 .. 1148097 -  -4.5  -2.77999   CAGGCAGTAACAGGA         TGGGCGGCGCA CTGT TGCGCCGTCGT          TTATTTCAGGTACGA  42 26
LQ332_RS05115 NONE
LQ332_RS05110 NONE
        fghA 1145678 .. 1145700 - -14.8  -2.75382   CATCCGAGGGAATCA           CGGGCCGGCA GGT TGCCGGCCAG           CGGCCGGCACTACCG  75 49
LQ332_RS05100 1143593 .. 1143640 - -15.1  -3.33815   ATCGGTTTGAATGAA GGC-CAACCGCGGCGGAACTC TGCACATC GA-TTCCACCGCGGTTGTGCC AGCCTTGCCGCACTT  84 482
LQ332_RS05070 1135514 .. 1135545 -   -18  -4.03234   GCCCTGCCACACAAA      GAGAAGGGGCGGCC CAAC GGCCGCCCCTCCTG       GTTTCCCTGCGGGAG 100 49
LQ332_RS05065 NONE
LQ332_RS05060 1134030 .. 1134086 - -38.5  -4.59773   TCTGACCCCTAAAAA GGGGACGGAGGGGATTAAGTCGTTTGT GGC ATAAACGACTTAATCCCCTCCGTCCCC TTTTTTCAGCCGGCG 100 31
LQ332_RS05050 1131819 .. 1131865 -  -5.5  -2.62184   TGCGGGCCCACAGCA GGCG-CTGCTGCGCGCGGCCAG TGCC CGGGTCGCCCGCGGTGGTCGCC TGCTGCTGCGCACGC  42 368
        rsgA 1128211 .. 1128249 - -20.4  -2.65815   CGCAGATTCATAGCA   GGGGTCAGAACCCATTAC GGT GCAATGGGATCCGACCCC   GCGATACCGATCAAC  93 36
LQ332_RS05025 1126620 .. 1126660 - -25.7    -2.749   GAAGGCAAAGAAGAG  CAAAAGCAAAGAGCCGGGC ATT GCCCGGCTCTTTGCTTTTC  AAGCGCAATCCCTTC 100 234
LQ332_RS05000 NONE
LQ332_RS04995 NONE
LQ332_RS04990 NONE
LQ332_RS04985 1116516 .. 1116541 - -17.5  -2.62263   AGGTTCCGGACACCA         CCGGGGGGGCC GTGC GGCCCACCCGG          GTCAGCCGTCCATCC  83 27
LQ332_RS04965 1110145 .. 1110185 - -16.8  -3.54424   TGGGACGCCCTGAAA CGCCGCGGGGCCGCCCCAC TGTC GTGGC-CGGCCCCGCGGTA  CCACACACCTGGATC  91 39
LQ332_RS04960 1107626 .. 1107655 - -22.3  -3.53012   TCCGCTTTGCGTAAA       CAGAAACGCGCCC CGTA GGGCGCGTTTCTG        CAGATCGAACCGGAA 100 48
LQ332_RS04945 1102545 .. 1102565 -  -3.8  -3.64822   ATCGGCGCATCGAAA            GGGCCGCC GTTTA GTCGGCCA            GCACGAACACGGAAC  53 15
LQ332_RS04940 NONE
LQ332_RS04935 1100060 .. 1100081 -  -3.5  -3.76224   CGCGGATCTACCAAA           GCGCGCTCC GTTC GGTACGGGC            AGTCGCGCCACGCCA  54 56
        waaA 1097128 .. 1097157 - -12.2  -2.66216   GTTGATCACGACAAT      GGCTTGCAGCGGCG CCGA CGCCGCTGC--GCC       GGGATCACCCGCGCG  65 30
LQ332_RS04915 1095621 .. 1095638 - -12.7  -3.81146   GCCGGCAACGAAGAA             GCCACCC GCGA GGGTGGC              TTTTTTGTGGGCATG  84 81
LQ332_RS04895 NONE
LQ332_RS04890 1088330 .. 1088350 - -12.5  -3.28712   GCCGCGGCCGCAGAA            CCCGGGGCA TTA CGCCCCGGA            TTCGTCCGGCTTCAC  71 14
LQ332_RS04880 1086262 .. 1086296 -    -7  -3.57263   ACCTGTAGCGTCAAA     CCGTGCTCGACTCATG CAA CAGCAGTCGGGCATGG     CTCGACGCTACAGAT  59 70
         ggt 1074048 .. 1074071 - -12.4  -2.62184   CGGGGGGCCAGATCA          GTCAGCCGCA TGGA TGCGGCTGCC           AAGCCTACAAGGACG  64 141
LQ332_RS04820 NONE
LQ332_RS04815 1072645 .. 1072685 - -28.5  -4.21471   ATCGGAAAACAAGAA  GGGGTCGGATCCGTTTTCC TGC GGAAGACGGATCCGACCCC  AACCATCAGCACGCG 100 174
        thiC 1068454 .. 1068465 -  -7.2  -3.21593   GATGGGCGGAGAATA                GCCG GGCG CGGC                 GTGATGAGCGGTAGT  54 72
LQ332_RS04800 1067705 .. 1067726 - -15.9  -2.62933   TAATTCGCGACACCA           TTCGCGCCC TTTT GGGCGCGAA            ATTTTTATCTGGCGT  77 47
LQ332_RS04795 1065146 .. 1065165 -  -7.8  -3.74251   GAGATCGCCACGAAA            TCGCCACG AGAT CGCGACGA             AGAAATTACGAAGGT  65 31
LQ332_RS04790 NONE
LQ332_RS04785 1061207 .. 1061232 - -20.5  -5.63504   AACCCTACAAAAAAA         GAGGGCGGACC GTTC GGTCCGCCCTC          CTTCTGTTGCTACCG 100 53
LQ332_RS04780 1060849 .. 1060871 - -16.3  -2.70298   TGGCCCAATGACAAG           GGGCGCACC CACGC GGTGCGCCC           TTGCTGCGTCAGCGA  81 34
LQ332_RS04765 1058278 .. 1058318 -  -3.8  -3.07043   GGCAGCATTGGAAGA CATGCGCGAGGC-CAGGAC GACA GACGGGAGCGCCGCGCATG  CTACTCGTCAAATGC  45 59
LQ332_RS04760 NONE
LQ332_RS04755 1056534 .. 1056579 -    -3  -3.06312   AAACCTGTCAGGTAA TCGGTG-CCGCGAGCGCGGCG TCATC CGCAGCACGGGCGGACACGGC GACGTACGTGGCGGC  43 194
LQ332_RS04750 1053566 .. 1053578 -  -5.5  -3.72576   CCTTTCCGCAGGAAA                GGGAT CCG ACCCC                TCGCTCATCCACGAT  60 44
LQ332_RS04740 1052525 .. 1052548 -    -8  -2.72344   GCCCAGCCCGAACCA          GAGCCAGCGC ATCA GCGCGGTCTC           CGTGCGCAGACGTGG  51 45
LQ332_RS04735 NONE
LQ332_RS04730 1051681 .. 1051695 -  -9.2  -2.96452   ACCCGTACAAGGACA               CCGCCG GGC CGGCGA               TCAATCCGCTGATCA  53 47
LQ332_RS04720 1048876 .. 1048892 - -12.3  -2.80816   CTCCCATCCAGTAGA              TCCACGC CCT GCGTGGA              TTCGCGCTGCTGGAC  66 45
LQ332_RS04705 1046286 .. 1046317 -   -21  -2.96695   GCGCCTATCAAACGA      CACAGGCCTGATCC TCGC GGACCAGGCCTGTG       TTTTTTGCGCCCGCA 100 68
         mpl NONE
LQ332_RS04695 1043628 .. 1043652 - -11.3   -3.7941   GATGCTGGACAAGAA          CACCGGCGCCG ATG CGCTGCCGGTG          CTGCCCGCCACGCTG  74 466
LQ332_RS04685 NONE
LQ332_RS04680 1040660 .. 1040676 - -13.7  -2.54896   GGCTCATTGAATGCA              GCCGAGC ATG GCTCGGC              GCTACATCAAGGCCG  70 71
LQ332_RS04670 1038938 .. 1038957 -  -8.5  -2.92038   TTGAAAACGATTACA            GCCGCGC ATTCTA GCGCAGC             AGGCCGAAGGTCGCA  56 69
LQ332_RS04665 1037897 .. 1037907 -  -2.4  -4.04397   ATCGCGACAAAAATA                 GCGC GTT GAGC                 TTCCCGCCTACTGGC  57 33
LQ332_RS04660 1036743 .. 1036790 - -11.3  -3.21099   GGCCGGCACTACCAA CCCCG--CAGGGTGCGCGCCGGGC ATG GCCCGGTGC-CACCGTGGACAGGG CCACGCCCTGAGTGG  68 48
LQ332_RS04650 1034523 .. 1034535 -  -9.1  -2.78384   CCTCTCCGCAGGAGA                GGGGT CCG ACCCC                GGCACCCTGGCTTCA  56 38
         azu 1033258 .. 1033313 - -42.4  -4.62069   GGCTGATCGCAAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTCTTCTAGCCGAA 100 32
LQ332_RS04625 1031048 .. 1031069 -  -4.3   -3.1247   ACGGCCCACACCCAA           GGCTAGGTC AATC GACCTCGAC            CATCTCGAAATCGGC  45 11
LQ332_RS04580 NONE
LQ332_RS04575 1024463 .. 1024484 -  -5.9  -5.58051   AAAGAAAAAAGAAAA           GCAA-AAGCG GGT CGCTTGCTGC           GCTCGCTCTGTGTCG 100 372
LQ332_RS04535 1016030 .. 1016058 - -14.6  -3.54424   GCTGATGCGTTGAAA       CGACAAGGGCGCC CGAA GGCGCCCCTG-CG        CTGTTGCCGGATGCA  86 44
         gmk NONE
        rpoZ 1004032 .. 1004052 -   -14  -3.66356   ATCCTGAATGCGAAA            CAGCCCGC ACGGG GCGGGCTG            TTCGGTGTATCCAAC  84 61
LQ332_RS04475 1001670 .. 1001683 -  -3.8  -2.63623   TGGGGGAAAACAGAG               CGGT GATTGT ACCG                GCTGGGGGTGCATCC  41 161
LQ332_RS04470 1001216 .. 1001258 -  -3.3  -2.62983   CGGACGGTGACAGGA CCGGAGTGACCGCCGCCTTG CGTG CCACGTGGCGGTCAGT-CGA TGACCATCACCGCAT  39 18
        recG  999085 ..  999125 - -19.1  -3.53444   TGAGCGTGCCGGAAA  TGGGGTCAGAGGCCATTGC TGC GCAAAGAGCTCTGACCCCA  GGGTGCTTACGCCGA 100 32
LQ332_RS04460  997827 ..  997856 - -19.4  -3.41229   AGAGCGGCATTATAA       GCACCGGTTGCC GCTCGG GGCAACCGGTGC        CGGGCAACGGACGTC 100 39
LQ332_RS04455  997494 ..  997514 - -19.7  -4.85782   TTGGTGAAAAACAAA            CGGCCGCGC AGA GCGCGGCCG            TCGGTTCGAAGCTGG 100 50
LQ332_RS04450  995919 ..  995938 - -16.4  -6.06723   GGCGGCAAAAAAAAA            CGCCCCGC AGAT GCGGGGCG             CTTCCGGCACAACCT 100 52
LQ332_RS04445  994271 ..  994303 - -10.6  -3.92592   AGGGGGAATATGAAA      GCTCCCCTCCCC AAGGAGAAA AGGGAGGGAAGC      GCCGCCCGCGGGGAT  75 420
LQ332_RS04440  993580 ..  993600 -  -9.6  -3.59738   GACCAGATCCTCAAA            GCCGGCGG GGACG CCGCGGGC            TGCGGCCTGGGGAGC  68 153
LQ332_RS04430 NONE
LQ332_RS04425  989016 ..  989028 -  -3.4  -2.85606   CCAGATACGACGATA                GATG TGGTT CATC                CTCTCTCTCCTTAAC  41 87
LQ332_RS04420  984565 ..  984575 -  -4.6  -3.01712   CGGCGGGGCGGAATA                 CGCG CGT CACG                 CCGGAGCGTCATCGC  46 41
LQ332_RS04415  983736 ..  983762 - -12.3  -3.05816   GGATGTCTGACCCAA        GC-GCGGCCGGGC ATG GCCCGGC-GCTGC        ACACGCCCTCCCGGT  69 41
LQ332_RS04400  979119 ..  979139 -    -4  -3.05844   CGCGCCAGGGCAATA            GATTGATG CGTGC CATCAGTC            GAAGCTCCTCAGCGC  45 20
LQ332_RS04395 NONE
        pilO NONE
LQ332_RS04385  977077 ..  977087 -  -5.4  -2.84051   CTATCCCCAGTAAAC                 GATC ATT GATC                 TTCGAGCGAGAGCGT  45 17
LQ332_RS04380  975036 ..  975066 - -21.3  -2.72511   TCTACTTGTGGAAAC       GAAGAAGGGCCGC TCGAG GCGGCCCTTCTTC       TAACACGTCGGTGCG 100 46
LQ332_RS04375 NONE
LQ332_RS04370 NONE
LQ332_RS04365 NONE
LQ332_RS04360  971498 ..  971511 -  -3.1   -3.1875   GAGATTCGAAGCCAA               CG-CGA TCA TCGGCG               ACGCTCCGGCCACAG  45 17
LQ332_RS04355 NONE
LQ332_RS04350  967946 ..  967960 -  -4.2  -4.18488   ATGCACTCTAACAAA               GCGC GCAAGCG GCGC               CGGTTCAGGTTCGCC  62 30
LQ332_RS04345  966244 ..  966283 - -11.4  -3.19653   GCAGAATTCGATGAA  GATCATGTAGTTGCCGGCC AGC GGCCGGCA-CTACCCGCCC  CCGGAGTCCGGGGGC  68 330
         tkt  963990 ..  964045 - -45.2    -4.371   CCGAGCAGAGGAAAA GGGGACGGAGGGGATCAAGTCGTGTG TGCA CACACGACTTGATCCCCTCCGTCCCC TTTTTTTGGTCTGGA 100 95
LQ332_RS04335 NONE
LQ332_RS04330  963123 ..  963178 -   -38   -5.0133   CACTGCCTGAAAAAA GGGGACGGAGGGGATTAAGTCGTATG TGCA CATGCGACTTAATCCCCTCCGTCCCC TTTTTTCATCCACGC 100 52
LQ332_RS04315  959682 ..  959720 - -17.5  -2.74563   GCCACAGGCCAACCA  GC-GCTGGCAGGCCTG-GG TCA CCACTGGCCTGCCAGCTGC  CATCGGCGCGCGGCT  84 394
LQ332_RS04305  958086 ..  958098 -  -3.3  -3.90112   GGTTCGCCAATGAAA                CCACC ATC GGCGA                ACAGCGCGCGCACAA  58 222
         gap  954521 ..  954545 - -19.3  -2.70932   GGCCCCCCTGAACGA          CGAACCCCGGC CAG GCCGGGGTCCG          TCTGCGATCTGCGCC  90 45
LQ332_RS04280 NONE
LQ332_RS04275  950236 ..  950246 -  -2.4  -3.35679   CTGCGGCAGGCAGAA                 GCGC AGA GCGA                 CAGCGACAGCGACAG  45 185
LQ332_RS04270 NONE
LQ332_RS04265  948310 ..  948320 -  -3.2  -3.25823   TCGGCGCTACAGGAA                 GCTA GGC CAGC                 AGCGTTTCCAGCTGC  45 16
         pyk  946485 ..  946498 -  -5.3  -2.66316   CCGTGGAGGACAGGA               TGGAA ACGC TTCCA                CGTCTACGCAGGACA  44 161
LQ332_RS04255  945353 ..  945380 - -13.5   -4.1413   AAGATACCCGCAAAA        GCAAACGCCGGC GCGAT GCCGGCGTT-GC        CCTGTTCATCCAGCG  89 51
LQ332_RS04250  944066 ..  944094 - -23.3  -3.18582   TACGCGACGCATGAA        GAAAAGGCCGGGC AAT GCCCGGCCTTTTC        CTTGGCAGCGTTGCG 100 68
LQ332_RS04235  940675 ..  940699 -  -7.1  -4.08317   GAATTGGAAACGAAA          TGCATCCACGC ATG GCGTGGATCTA          CCGTGCCGACCAAGG  68 353
LQ332_RS04230  939858 ..  939902 -  -3.4  -2.53759   AACAGCTCCAAGGTA CGCACGCG-CGCACGGCGCCC GGTC AGGCGTCGTGCGGCAGATTCA TGGGGACATCAGCGG  39 34
LQ332_RS04225  937671 ..  937691 -  -8.2  -2.74563   CGTAGAGTCGAACCA            GCCCGACG GAGGG CGTCGGGT            GGGGACGGATCCTGG  53 104
LQ332_RS04220 NONE
LQ332_RS04215 NONE
LQ332_RS04210  932543 ..  932583 - -26.9  -3.75378   AGCGCCAGAAGACAA  GGGGTCGGATCCCTTGCGC AGC GCGCGAGGGCTCCGACCCC  GGTTCGCCCGTTTGA 100 93
LQ332_RS04205 NONE
LQ332_RS04200  930009 ..  930034 -  -6.9  -4.17491   AGGAAACTTTCAAAA         CGTCATGCGCGC TTG ACGCA-ATGACG         AACCCTGGAAGGGGT  68 85
LQ332_RS04195  928952 ..  928962 -  -6.8   -3.4811   CCTCCTAGAAGAACA                 TGCC CAG GGCA                 ATCTGGGGGCTGACG  57 4
LQ332_RS04190  927395 ..  927419 - -10.8  -3.04263   AGTGCAGCGGGAAGA         GCGGTGCGAAC CGAG GTTCGCACC-C          ACCGGGCAATGGCGT  62 85
LQ332_RS04165  923690 ..  923700 -  -3.2  -3.04398   TTTCCTGCGGAAAAC                 GGAT CCG ACCC                 CCAGCTGGCTTCAAG  43 36
LQ332_RS04140  917667 ..  917702 - -24.2  -3.01712   CCCCCTGGCGCAACA    GGTCAGAGCCCTTTCC CTGC GGAAAGGGCTCCGACC     CCGGCGGTTGCTGCT 100 40
LQ332_RS04135  917053 ..  917066 -  -2.4  -4.56775   ATCGCGGTCGAAAAA               CAGT ACCAGG ACTG                GATCCAGTCGCTGCA  71 441
LQ332_RS04125 NONE
        rimK  915407 ..  915433 - -20.9  -5.38047   GACCGACATAAAAAA         GGCCCAGGCGG TGCAC CCGCCTGGGCC         TGAAGTCGTATCCCG 100 157
LQ332_RS04115  914762 ..  914819 - -15.5  -2.77043   TCCATGAGTGGAAAT CGATCCTGCGCTATCGCCGA-TGCGCCG TCA CGGCACGGTCGGCGAGACCACAGGCCCG TGCGCGCTCAACGCC  78 33
LQ332_RS04110  914212 ..  914240 -  -3.8  -2.59431   TGCGTCCACAAGGGA       CGCACGG-CA-GGG TGA CCGATGGCCGCGCG       CGGCCCGCGCGACAG  41 44
LQ332_RS04105 NONE
LQ332_RS04100 NONE
LQ332_RS04095  911117 ..  911131 -  -4.2  -4.73388   AAGCGCGAGGAAAAA               GACTCC AGC GGATTC               TGATGAATCCCCACG  78 403
LQ332_RS04090  910438 ..  910483 - -11.8  -2.85545   TGGCCAACAAGATGA TCGCCGCCCAG-GCCAGCCGC GCGCA GCGGTTGGCGCTGGCCGATGA TGTGGTGGTCAACGA  61 172
LQ332_RS04070  906979 ..  907003 - -21.5  -4.19746   GCGACCCTAAAATAA          CAAGGCCCGGC ATT GCCGGGCCTTG          TTTGCCACTTGGCCG 100 59
LQ332_RS04065 NONE
LQ332_RS04060  903316 ..  903335 -  -3.4  -2.69042   ACATCAGCAAAGGGA            CACGCCCC TGTC GGGCCGCA             GGTTACCCCTGCTCC  40 28
        pilB  901397 ..  901413 - -15.1  -2.94199   GATGGAGTAAGGACA              GGGCCCG ACG CGGGCCC              ACCAACGGGTAGTGC  79 170
        sucC NONE
        sucD  895793 ..  895810 - -14.1  -3.95073   CGCCAGACGCAGAAA             GGCCGCC CGGA GGCGGCC              TTTCTGTTTCAAGCG  93 90
LQ332_RS04030  893634 ..  893650 -  -7.2  -3.21099   GGCCGGCACTACCAA              GCGCGG TAGAT CCACGC              CATGCGTGGATGCGC  54 435
        rluD NONE
        pgeF NONE
LQ332_RS04005 NONE
LQ332_RS04000  888437 ..  888492 - -42.4  -5.26875   GGCTGAAGGAAAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTTCTTCAATCCA 100 33
LQ332_RS03975 NONE
LQ332_RS03970  880268 ..  880281 -  -3.8  -2.66106   GACCCGAAGAAGTGA               TGCC TCCGTG GGCA                AGGCGCACATCACCT  42 70
LQ332_RS03965  878032 ..  878042 -  -2.4  -3.05463   ATGGGTTCCAGCCAA                 CGGC GGG GCCC                 CTCGTGGCTGGTCGC  42 482
LQ332_RS03960  875845 ..  875876 -  -7.3  -3.04144   CGGCTACTTCGAACA     GGTGC-TGGCCGCCA ACGG TGGCCGCCATGC-CC      TGCGCGAGCATTCGT  52 487
LQ332_RS03950  874279 ..  874295 -  -4.3  -3.57561   CGGCAATGCTGGAAA              GATGCGG TTG CCCCACC              CGGTTTCAAGGGTGG  53 139
        clpB NONE
LQ332_RS03940  870972 ..  870989 - -14.1  -3.18264   CTTCTGATGCATGAA             GGGCGCC GCTG GGCGCCC              TTTCTTTCTGCGGTC  78 39
LQ332_RS03920  866398 ..  866429 -   -21  -5.27335   CCCCGGAAACAAAAA      GATCCCCGGTCGAC CCGC ATCGACCGGGGATC       TGGATCGCCACGTTG 100 128
LQ332_RS03905  859565 ..  859623 - -40.8  -4.59342   CCGATCAGAAAGAAA CGGGGACGGAGGGGATTAAGTCGTTTGT GGC ACAAACGACTTAATCCCCTCCGTCCCCT TTTTTGCGTGCTCAG 100 37
       blaL2 NONE
LQ332_RS03890 NONE
LQ332_RS03885  854510 ..  854548 -  -8.7  -2.75481   CCCCAACCCTAACGA   CCCGGGCCGGTGCGC GCAAACCCT GCGCACCGGCCACGT   CACCTCATCGGTGCA  53 30
LQ332_RS03880  853721 ..  853755 -  -7.7  -3.14132   GGTGTGGGTGAGCAA    CGGCTGCCGGGCGCGC TTCG GCGCGCGCTG-AGCCC     CGGGGTCGGATCCCT  55 121
        aspS NONE
LQ332_RS03865 NONE
LQ332_RS03860  850145 ..  850155 -  -2.4   -3.6682   GGGGAGTCATGCAAA                 CAGC CTG GCGG                 TCAGCGGGGCAGGAA  50 85
LQ332_RS03855  849456 ..  849483 -  -8.5  -3.05463   ATCGGCCCGACGGAA       TGC--CGCCGAGC ATGG GCTCGGCGCTGCA        AGGCGGCCCTAAGTT  57 49
LQ332_RS03850 NONE
        ruvC NONE
        ruvA  847359 ..  847382 -  -5.2  -2.72324   TTGAGGGAAAGGAAG          GCCGTTCAGCG CAG CGCCGA-CTGC          AGCGCCTTGCGGATC  44 7
LQ332_RS03835  845353 ..  845396 - -11.6  -2.77701   ACCCCATGAACACCA GTGGTGCGGCGGATGCCGGCC AGC GGCCGGCA-CTACCAGACCTC AGATCTCGACCTGGG  62 24
        ruvB NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA  841278 ..  841292 -  -4.9  -4.33819   ACGAGGGATAACAAA               GCGGC GGTGA ACCGC               TTCGCAATCATGAAC  70 252
        tolB NONE
         pal NONE
        ybgF  838456 ..  838478 -  -9.9  -4.05788   GCGCCGGAAACGAAA          GCAGCCGAGC ATGG GCTCGGCT-C           TACGGGGTGCGCAGT  75 59
        queE  837651 ..  837674 -  -3.7  -3.59979   GGTTGGGAGGGGAAA          GCCAGCACG CTGTCC CGCGCCGGA           GCTACATCAGGGAAC  53 52
        queC  836927 ..  836943 - -15.1   -3.1355   CGCACCTACAGTGAA              GCCGGCC AGC GGCCGGC              TCTACCAGACGCGGT  80 40
LQ332_RS03775  835644 ..  835660 - -13.7  -5.45652   AGGTGCAACAAAAAA              GCACCGC CAA GCGGTGC              CTTTCGGAATGATCT 100 56
LQ332_RS03760 NONE
LQ332_RS03755  831541 ..  831573 -  -9.1   -2.8655   TTCATCCACACCACA      CCCCGACATCCATGC CAT GCATGGATGCCACCG      GCCATCAACCGCCGG  58 30
LQ332_RS03740  829592 ..  829604 -  -3.3  -4.65916   CGTATGGGAAGAAAA                CTTCG GCG CGCAG                CGCTTCTACGCGCGA  72 200
        hrpA  818581 ..  818601 -  -9.6  -3.45027   ACGTCGGACCAAATA            GCGCCCGG GCATT CCGGCCGC            GCCGGATTCATGCCT  65 81
LQ332_RS03695 NONE
LQ332_RS03690  813933 ..  813949 -  -4.3  -3.37959   GAAGGGCAAGATCAA              CCTGAGC ATG GCCCATG              GCCAGCCGGTGGTCG  47 249
        mrcB NONE
LQ332_RS03675  808764 ..  808784 - -11.8  -2.82104   AAAGAGGATGAATTA            CCGCGCGC GCGCA GCGCGCGA            CCCGCTTTTGATTTT  66 259
LQ332_RS03670 NONE
        tsaB  805438 ..  805458 - -15.5  -2.87211   ACCTTGGTCGACACA            CATCCACGC CAC GCGTGGATG            CGAGCGAAGCGACCC  80 253
        pilG NONE
LQ332_RS03645 NONE
LQ332_RS03640  801781 ..  801799 -  -2.2  -2.53263   TCGATCTTCAATGCA             GGGGGCGA TGC CCGGCCTC             AGGCCGCGGCTTGCC  38 24
LQ332_RS03635 NONE
LQ332_RS03630 NONE
LQ332_RS03625 NONE
LQ332_RS03620  790940 ..  790954 -  -8.5  -3.64703   TCCTGCGCACGGAAA               CGGCC GGGCT GGCCG               CGATTGCCGCATTGC  63 168
        nudE NONE
        cysQ NONE
        mazG NONE
LQ332_RS03590  786232 ..  786255 -  -5.3  -3.14344   CACGGTCGGCAGGAA         GCGCC--GCCA CGCA TGGCCCGGCGC          TACCCTGATGAGGTG  47 25
LQ332_RS03585  785830 ..  785847 -  -2.5  -2.74563   TTCACAGGGGAACTA             CCAGGGC ACGC GCCCGCG              CAGGATGTCGGCGAA  38 5
LQ332_RS03580 NONE
LQ332_RS03575  784345 ..  784373 -  -8.1  -3.14132   CGGCGCCCGCACGAA       GCGGCCCGGCTC TACAGG GAGC-GGCCCGC        AGCCTCGACCTGCAG  55 8
        gcvT  783072 ..  783101 - -17.9  -3.35813   GGCTAGTGTAACCAA       CCGGCCGCCACTG CTGT CAGTGACGACCGG        CATGTCCGGATCAGG  93 36
        gcvH  782579 ..  782598 -   -15  -5.45802   TCGTCAAAACAAAAA            CGGCCACC CGAA GGTGGCCG             TTCCAGAACCCGGAG 100 49
LQ332_RS03560  781294 ..  781324 - -11.9  -5.60993   GGCCCCATAAAAAAA      CCCCCTCCCC-GCT GGGC AGCCAGGGAAGGGG       TTTCAGGATGCGGCT 100 53
LQ332_RS03550  779429 ..  779450 -  -5.7  -4.57073   CATCGTGGCGAAAAA           CCGCCGAGC ATGG GTTCGGCGC            TACAGCTCCGCAGCG  76 41
LQ332_RS03540  776263 ..  776305 - -26.4  -3.53366   GACAGGGAAGGAGAA TGGGGTCAGCGCCCTTTCCC CGC GGGAAAGGGCTCTGACCCCG GCAAATCAGCGGTCG 100 31
LQ332_RS03535  775619 ..  775675 - -20.4  -4.80737   CAAGAGAAAAAAGAA GAGCAGAAGCAACAGCAAAA-GCGGCC CACC GGCCGCTTTTTGCTGTTGCTGTTGCTG TTGATCTTCTTTTTC 100 234
LQ332_RS03515  770675 ..  770691 - -15.1  -5.75342   CCGCCTGAAAAAAAA              CCGCGGC ATC GCCGCGG              TCCTTGTTCACGCTG 100 53
        mtgA  764547 ..  764566 -    -2  -2.52516   GCGGCGATGACGAAG            GTGAGCCG TTCG CGGGTCAT             GCCCGGATTGTACGT  37 89
LQ332_RS03490 NONE
LQ332_RS03485  762920 ..  762930 -  -4.6  -3.72576   TTGGCGGCTACCAAA                 GGCG AGG CACC                 GCGCATGTACGCACC  58 251
LQ332_RS03460 NONE
LQ332_RS03455 NONE
LQ332_RS03450  753334 ..  753348 -  -7.8  -2.57931   TTCATCGGCCAGAAG               GACCGC ACC GCGATC               GGGCGCGACCTGGCG  48 267
LQ332_RS03435  750597 ..  750645 - -16.5  -3.07895   GTCACCGGGAACAGA GGGGTTGCCGGCCAGCGGCCGGC ACT ACCGGTCGGCGGCCAGCCACGCC TGCACCGCGGCCGCG  85 1
LQ332_RS03415 NONE
LQ332_RS03410  740916 ..  740945 -  -8.5  -3.90112   TGCTTCGCAAGCAAA       GCGCCCTC-ACCCC TGG GGGCTCGATGGCGC       CATCCATGGCGCCAA  69 439
LQ332_RS03380  735656 ..  735684 -  -6.6  -3.45023   GCAGCAGGAGCAGAA       CCTGCAGGCCGCG CAGC CG-GGCCGGCACG        GCATGAGCCGGCCGC  55 169
        pdxH NONE
 aac(6')-Iak NONE
LQ332_RS03360  733485 ..  733538 - -17.6  -3.55622   CTGAAGGCCTGTAAA GCCGAGCCCATGCTCGGCTGATGTTC GCGC GAA-AGCAGCCGGGCATGG-CCCGGC TCTACAACCGCCGCC  93 27
        prpB NONE
        prpC  729617 ..  729641 - -18.6  -2.62184   GCGGCGGCGAGAGCA          TCCGGCCGGC ACGCG GCCGGCCGGA          TGGGGACAGCAGGAG  86 43
        acnD  726903 ..  726929 -   -23  -3.28712   CCGGGTGTCGGACAA         GCCCGCCCCCGG CCT CCGGGGGCAGGC         ATTCAGGCCGGTATC 100 39
LQ332_RS03335 NONE
LQ332_RS03330 NONE
        prpF NONE
LQ332_RS03320  723506 ..  723526 - -12.5  -3.05816   GCAGGTTGGATGGAA            TTGCCGGCC AGC GGCCGGCAC            TACCGATCGCCCTAC  69 37
LQ332_RS03315 NONE
        pbpC  716007 ..  716043 -   -10  -3.28712   TGCCCGGCTGCACAA   CGGC-GTGGCCGGCCCC GACC AGGGCCGGCACCTACCG    GAGGACGTTGAACCT  65 20
LQ332_RS03295  713696 ..  713717 - -12.3  -3.35813   GTCCAGGGCAATGAA           GTTGCCGGCC AGC GGCCGGCA-C           TACCTTCAAATGGCC  73 31
        hflK NONE
LQ332_RS03275  709985 ..  710017 -   -22  -4.59853   GGAACTCCGGAAAAA      GCACGGGGCCCGGC AGTTG GCCGGGCCCCGTGG      GGTAATGCCCTGCGA 100 43
LQ332_RS03270  709588 ..  709611 -   -16  -4.72846   CCAGACACGGAAAAA          GCCGAACGGG GAGG CCCGTCCGGC           TTTTGTGCATTATCC 100 195
LQ332_RS03265  708109 ..  708126 - -14.1  -4.99435   CTCAATAACGAAAAA             GCCCCGC TTTC GCGGGGC              TTTTTGCGGTCACCT 100 66
LQ332_RS03240  700922 ..  700940 - -13.1  -3.05844   CGGGCGATGGCAATA             CGGCCGC TCAAG GCGGCCG             TATTCCTGTCACTGC  72 54
LQ332_RS03230  699459 ..  699476 -  -4.8  -3.75024   GGCGACCAGCAAGAA             GGCTGCC AAGAA GGC-GCC             TGCCAGGAAGTCGGC  58 308
LQ332_RS03215 NONE
LQ332_RS03210  694866 ..  694885 -  -4.8  -3.14931   GGCACCCCCCATCAA            GCCTCGCG CATG CGCCGGGC             GATGGCGCTGCCGGC  47 2
LQ332_RS03205  694286 ..  694305 - -16.4  -4.46926   CATCGGATGACAAAA            CGGCCCGC GAAA GCGGGCCG             TTCTCATAAGGGCGT 100 68
LQ332_RS03195 NONE
LQ332_RS03190 NONE
LQ332_RS03185  687899 ..  687922 - -13.8   -6.4753   CGAAATAAAAAAAAA          GGGCGGGTCC GCGA GGATCCGCCC           CATTCTGGTAGTGCC 100 291
LQ332_RS03160 NONE
LQ332_RS03155  678281 ..  678299 - -13.1  -5.79526   AGAGCGGAAAAAAAA             GCGCCGC ATAAA GCGGCGC             AGGTTGAGATTAACA 100 90
LQ332_RS03150  676863 ..  676908 - -23.5  -2.83271   TGACGGCGAGAAGCA TCAGGGGTCAGATCCGTTTCC TCCG GGAAACGGATCTGACCCCTTC TTTGTTCATGGGTCT 100 112
LQ332_RS03135  673390 ..  673417 -   -12  -4.26076   CGATCCTGATCAAAA        GCAGTTGCCGGCC AGC GGCCGGCA-CTCC        CTCAGAACCTGCCTT  95 27
        rpoE NONE
LQ332_RS03105  666450 ..  666474 - -12.7  -3.25341   ATGGGAAGAGGAATA          CGGGCCCCGCC GAC GGCGGGGCGTG          AAGGCCCGGCTCAGT  74 36
LQ332_RS03100  664787 ..  664803 -  -3.5  -4.07568   GCCCCGCCGCGAAAA              CGGCCGC ATC GTGCCCG              CCCTGGAACGGCCGA  60 102
        lepA  662878 ..  662902 - -13.6  -2.80994   TGCAACGTCACCAGA         CG-ACCGGCCC TGCA GGGCCGGTGCG          GGCCTTACTTGTTGT  73 30
        lepB NONE
LQ332_RS03085 NONE
         rnc NONE
         era  660031 ..  660069 -  -6.7  -3.21099   TGCGTGCAGCACGAA  GCCGGTGTCGTCCTCGAT CATC ATCGAAG-CGACCGCGAC   CGCTTACTCGTAACC  54 29
        recO  659040 ..  659094 -   -23  -3.74077   TGTCAGATATCGAAA TCAATCTGGGGTCGGATCCGTTTTCC TGC GGAAAACGGATCCGACCCCACCCCGT TCCGACAGCTCGCGG 100 266
        rlmD NONE
LQ332_RS03055 NONE
LQ332_RS03050  655110 ..  655131 -    -8  -3.31144   GGTCGATCTCCACAA           CAC-GCGCC CGCAT GGCGCAGTG           CCGCATTGTCGCAGA  58 153
        nagZ NONE
LQ332_RS03040  653476 ..  653499 -   -16  -3.47029   CCATGGAAAGACGAA          CGCCGGCACC CGAG GATGCCGGCG           GTGGAATAAGACGCG  90 59
LQ332_RS03035  652685 ..  652719 -  -2.6  -3.68529   AGCTGAGTATGCAAA     GCTTGCTCGGGGAAGA CAA TCACCCCCGTGCCAAT     TCGCCCACCAGTTCC  50 10
LQ332_RS03030  652370 ..  652385 - -11.8  -6.06723   CCCGGCAAAAAAAAA              CCCCGC CGGA GCGGGG               TTTTCAACGCACTGT 100 49
LQ332_RS03025  650960 ..  650987 -    -9  -4.56914   TCACGGAAAGGAAAA        CGGGCGACGCGC AATC GCGTGCCACCCA         CTTCTCGCATATCCG  84 77
LQ332_RS03020  650248 ..  650301 - -10.4  -3.17075   CTGGCGCGAACGCAA TGCCGC-GCTGGAGGTGCATGTGCTGC GCG GCAAC-CACG-ACCGCCAGCTGCCGCA TGCCCAGCTGCAGGT  60 313
LQ332_RS02995  643030 ..  643048 - -17.4  -3.83026   CGGCGCTACAGGAAA             GCCGCGGC GCC GCCGCGGC             TTTTCTGCTTTTCGC  95 124
LQ332_RS02975  637582 ..  637603 - -10.9  -3.22475   CGCAGCGCGAGAACA           TCGCGCCGCA GCG TGCGGC-CGA           CCGCATCGCCGAAAG  64 167
LQ332_RS02965  635183 ..  635206 -  -7.4  -3.04461   GAGCCAGGGGCAACA          GCGCG-CAAGC GCT GGTTGTCGCGC          GTGATCAGCTGGCTG  52 65
LQ332_RS02945  631558 ..  631574 - -13.7  -3.53091   AGGCCTTCCTGTAAA              GCCGAGC CGT GCTCGGC              TGCGCTTCAGGATGC  81 106
LQ332_RS02940  630770 ..  630790 -  -5.4  -4.43012   AGTGCAACAGCAAAA            GCCAGC ATTTCGTGG GCTGGC            GGGGTGGGGCCGGTT  70 454
LQ332_RS02925 NONE
LQ332_RS02920 NONE
LQ332_RS02915  627714 ..  627772 - -17.3  -2.92111   CGCTGAAAAAAGCCA GCTGACCCCGCTCCGAC-CGCGGCGGCG CTGC CGCCGCGGCCTGCCGGACCGCGCTCAGC GATCCAGGCGCACCT  88 21
LQ332_RS02895  624718 ..  624730 -  -4.7  -3.59979   GCCGGGCACTGGAAA                CGGCG CTG CGCCT                GGACGGTCGCCAGGA  54 424
LQ332_RS02885  623113 ..  623133 -  -3.1  -3.55622   GGCAATCGGTGGAAA            CGGGCGCCA GTG TAGCGGGCG            GACTCAGCGATCCAG  49 29
LQ332_RS02880 NONE
LQ332_RS02875 NONE
LQ332_RS02870  620460 ..  620473 -  -2.3  -3.35813   CGCCACGTCAACGAA               GCACC GAAG GGCAC                GATGGACTTCCTGTT  45 429
LQ332_RS02860  617624 ..  617666 - -23.6  -3.29144   TTACTGCCCCTATAA CAGGGGTCAGATCCCTTTCC GCA GGAAAGGGATCTGACCCCAT CCCGCAGTTACGGCA 100 33
LQ332_RS02810  606936 ..  606970 -  -4.9  -3.44527   CATCGAGGACGACAA    GGACAGCGTGCGCTGGG AGC CGCTGCGCA-GCCG-CC    GCCACTGGACGCTGC  52 99
LQ332_RS02780  600525 ..  600541 - -12.3  -3.53444   GGATGCGGCGGCAAA              GCGGTAC AGC GTACCGC              AGTGCGGCAAACGTC  75 90
        leuS  597821 ..  597849 - -21.8  -2.75844   CCCTGCACCGGAAAG        GCACCGTCCGCC ACGCG GGCGGACGGTGC        GGGGTACATCAGGCG 100 34
        lptE NONE
        holA NONE
        nadD  595395 ..  595422 - -11.2  -2.78384   GTGGGGGCGATTATA        CGGGGATGGCGC GGCC GCGCCATTCACG         CTGTGGCCGGGCGGT  62 21
        rsfS  594901 ..  594929 - -20.3  -4.08064   AACGGTCCTCCAAAA        CGTCGACGGCGCC ATC GGCGCCGTCGAAG        GGATGCATCAACGTG 100 45
        rlmH  594407 ..  594420 -  -2.3   -3.4529   AGACGACTAGTATAA               CGCCT CTTC ACGCG                CGATGGTAGGGGTGA  47 19
LQ332_RS02745  594285 ..  594304 - -12.2  -6.26417   CACGACAAAAAAAAA            CCTGCATC TCGC GATGCAGG             TTTCTCAAGGTGGCG 100 36
LQ332_RS02740  593166 ..  593210 - -12.9  -3.32844   GCTGGCACTGTAGAA CCGAGCCCACGCTCGGCTTC GCACAG GCAGCCGAGCATGG-CTTGG CTCTACAACCGGCGT  77 28
LQ332_RS02715 NONE
         rng NONE
LQ332_RS02705  580871 ..  580893 - -13.4  -3.25823   CCCCGTGGACAGGAA           GCCGCGCTCA GCG CGAACGCGGC           AGGTCGGTGACGGTC  74 10
        tldD  579206 ..  579218 -  -4.7  -3.97741   AAAGGCGAAGAACAA                GCCGC CGC GCGCC                TACCGCGAGATCTTC  63 181
        pmbA NONE
LQ332_RS02685  576806 ..  576824 - -17.4  -4.34402   CCCCGCACATGAAAA             CGCCCGGC AAT GCCGGGCG             TTTTCAGTTCCGCAT 100 51
LQ332_RS02655  569754 ..  569772 -   -16  -4.09556   GATACGCAAAGCAAA             GCCGCTGC CCT GCAGCGGC             TTTTTTGTTGGGCCC  95 274
LQ332_RS02640  567627 ..  567652 - -18.3  -3.34398   CGTGGCCCGGAAACA         CAACGGCCCGC CGAA GCGGGCCGTCG          CTGCCATCACGATCG  93 49
LQ332_RS02635  566276 ..  566289 -  -2.3  -2.52464   CCCCGCCGCAAGCCA               GGCGT GAGG ACGCA                TGGGGCCGCGACCGA  37 68
        gorA  564774 ..  564784 -  -4.6  -3.53012   CCGCTGCCCTGTAAA                 GCCA CAA CGGC                 CCGGCTCAGCGCATC  53 31
LQ332_RS02620 NONE
LQ332_RS02615 NONE
LQ332_RS02610  562649 ..  562677 - -14.8  -3.28712   GGTCGGCGCCTACAA        CGTCAAATGATC CTTCC GATCATTTGACG        CTGCGCAGATGGTTG  83 16
        apbC  545489 ..  545499 -  -3.2  -2.81547   CGCTTACAGCAACGA                 CGAC AGG ATCG                 GGATCGAGGCCCGCG  41 3
         dcd  544763 ..  544780 - -14.1  -4.14764   CGGCAAATAAGCAAA             GGCGGCG CAAG CGCCGCC              CTCTGCCCTGCCAGG  93 71
        rimO  541874 ..  541926 - -11.2  -3.14132   TGGCGGCGGGACGAA GCGCCGTGAACCGC-CGCCG-TCACC GGT GGCGGTCGGCGCGAGGGTCACAGCAC CTTGAGGTCGAATGC  66 17
LQ332_RS02535  540607 ..  540629 -  -3.3  -4.18488   ACCTACCGCAAGAAA          CAGCTGGGCG AGAT CGACC-GCCG           GGTTCGCTACCTGAC  63 481
LQ332_RS02520 NONE
LQ332_RS02515  536677 ..  536720 - -15.2  -3.05384   TCTCCGTTGATCCAA CGCG-GCGGGCATTGCCGGCC AGC GGCCGGCACTACCGGTGCGCG CGTTACTGCAGGGCC  80 28
        prmB NONE
        aroC NONE
LQ332_RS02490 NONE
LQ332_RS02485  530709 ..  530732 -  -6.6   -4.0162   GGGCGACACTATAAA          GCGTGCGGAC CGCG GTCCGCATCC           ATCGAGGGGGACCTT  67 134
LQ332_RS02480 NONE
LQ332_RS02475 NONE
        truA NONE
LQ332_RS02465  526421 ..  526448 - -11.2  -2.62263   ACTGCGCTGAGAGGA        GGC-CCGCGCGGC ATC ACCGCCCGGAGCC        CGCAGCCCGGGCCTG  62 401
        trpB  524208 ..  524235 -  -3.2  -3.14211   ACTGTTGCGCAGCAA        CGCGCTCACAGC ACCA GCCCTTCGCGCG         CGGCGATGGTGTGCA  43 3
LQ332_RS02450 NONE
        trpA  522648 ..  522676 -  -7.4  -2.55351   TGCGTGCAGACCAAT       GGGTAGTGCCGGCC GCT GGCCGGCAG--CCC       TTGCACGCGCGCCCT  50 74
        accD NONE
        glmM  520180 ..  520199 - -12.1   -4.8622   CGCTTGAACGAAAAA            CGCCCCG GCTTTG CGGGGCG             TTTTCCGTTTGCTGA 100 54
LQ332_RS02415  515095 ..  515112 - -14.1  -5.27335   CCCTGCAAAGAAAAA             GGCCGCC TTTC GGCGGCC              TCGCTTCTCGTTACT 100 36
        tpiA NONE
        secG NONE
LQ332_RS02400 NONE
LQ332_RS02395 NONE
LQ332_RS02390 NONE
LQ332_RS02385 NONE
LQ332_RS02380  510301 ..  510332 - -14.5  -3.95219   GTGAAATTCCAGAAA     CTGC-GGC-GCCGGC TTGC GCCGGCTGCCTGCAG      CGGGCGTTGGCGTGG  95 50
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
LQ332_RS02350 NONE
        nuoK NONE
        nuoL NONE
LQ332_RS02335  499899 ..  499911 -  -7.7  -2.72855   CAAATCCTGGAATTA                CAGCA GCT TGCTG                GATGCGATCTGCATC  51 10
        nuoN  498392 ..  498402 -  -4.6  -2.62263   AGGCTGCGCATATTA                 CACG AAT CGCG                 CAGCTTTGTGTCAAC  43 43
LQ332_RS02325 NONE
LQ332_RS02320  498019 ..  498045 - -18.8  -5.27335   GGCCCCAAAGAAAAA         CGCCTCCGAAGC AGG GCTTCGAAGGCG         ATTCCTTTACTTGGT 100 37
        rimP NONE
        nusA NONE
        infB  492729 ..  492770 - -10.7  -2.62184   TCGGGTTCTACAGCA TGGCAGGGCCCGACC-GGGC TCT ACCCTGGCAGGGCCCCACCG GGCTCTTCCTTGGCA  58 100
        rbfA  492227 ..  492248 - -10.1  -4.34402   TGCGCGAGATCAAAA           GCAGCCGAGC ATG GCCCGGC-GC           TACAGGAACATTATT  88 36
        truB  491192 ..  491214 -  -6.9  -4.07885   CAGGCTGCCGGAAAA           CGGCCGCGA AATTG TAACGGCCG           GGGGCTTCCGGGACA  68 70
        rpsO  490788 ..  490811 - -19.6  -5.20781   TACTACAAAACAAAA          CCGCGGCGCA TCGC TGCGCCGCGG           GGGATTCGTTGCTTA 100 38
         pnp  488478 ..  488493 - -11.8  -5.33026   CAAGGCAAAGAAAAA              GCGGGC CGAA GCCCGC               TTTTTCATTTCAGCA 100 96
LQ332_RS02280  486999 ..  487022 -  -4.4  -3.58343   TGGATCATGCGCAAA          GCGTAG-CGCC GCC GGCGTCGTCGC          AGTGTGCGGTGTCGG  53 89
LQ332_RS02275  486563 ..  486591 - -10.1  -3.33696   GTCTGGGCCAACTAA        GCTTTCGCCGGGC ATG GCCCGGCGCTACC        GCTGCGGGTGTTCTT  67 21
        thrS  482065 ..  482094 - -18.5  -3.07994   CCCAAGGGTATCGAA       CCGGCCCGGGTGC CTGT GCCCCCGGACCGG        ACCTTTGCTTACGCG  89 34
        infC  481438 ..  481466 - -17.5  -4.07568   CGGCCTGCCGGAAAA        GCAAAGGGACGCC AGC GGCGTCCCCTTAC        CCTGAACCATTCAGC 100 71
        rpmI NONE
        rplT  480593 ..  480624 - -15.2  -5.08824   CCGGGACCCAAAAAA      GAATGGGGAAGGAC TTGC GCCCTTCCCCATGC       ATTGCCTTGACCTGA 100 79
LQ332_RS02235 NONE
        pheT NONE
LQ332_RS02225 NONE
LQ332_RS02220 NONE
LQ332_RS02215  476143 ..  476164 - -13.7  -5.28176   CGCACGCACAAAAAA           GCCCACGCA TCGC TGCGCGGGC            TTCTTGATTCATCAC 100 43
LQ332_RS02200  474373 ..  474399 -  -8.7  -2.62184   CGCTGTTCGACACCA        CCACC-CTGCAC GCCC GGGCAGCGGTGG         ATGCGGCACTGGCCT  53 52
LQ332_RS02190  472901 ..  472916 -    -6  -3.03124   CGGCAGTCGTGAACA              GGCCGC GTGC GCGGCG               TGAATCAACGCGGGC  48 30
LQ332_RS02185  472602 ..  472650 - -15.4  -2.60075   GTGCTGGTAATCAAC CTGTTCTCGCGCAGCAGCGCGCAC TGA GTGCACGCTGCCGCGCAACA-C-G CACTAGCTGACCTTC  77 28
LQ332_RS02165  471093 ..  471113 -  -9.7  -3.33911   ATTCAAACAACTCAA            CCGTGGC TGACTGC GCCACGG            CCGCTGCTGTCACTC  64 35
LQ332_RS02160  470317 ..  470339 - -12.1  -3.08133   GAGGCACGCAGGGAA           TCAGGGCAT ATGGG ATGCCCTGA           TCGCGGACAATACGG  69 114
LQ332_RS02155  469680 ..  469708 -  -5.7  -3.42996   CACGATCGAGGACAA        CGTGGTGGCCGGC GGC GCCGGCTCCGGCG        TAGGCGAACTGCTGA  55 356
LQ332_RS02115  462048 ..  462058 -  -4.6  -4.07568   GCTGCGCCGGGAAAA                 CGCG GCA CACG                 GCTGACACGACCCGG  64 76
LQ332_RS02105  459955 ..  459965 -  -6.8  -3.14132   CTGTCCCGCGATGAA                 GCGA GCG TCGC                 CTTCACCGCGCTGGT  50 387
LQ332_RS02095  459458 ..  459482 - -20.1  -3.49568   CCACTCATAAGAAGA          CCCGCAGATCG TCT CGATCTGCGGG          TTTTTTCTTTTCAGC 100 49
LQ332_RS02085  456730 ..  456755 - -17.5  -5.13741   CGAACGCAACAAAAA         GGGCGGCCCGG ATCA CCGCGCCGCCC          TGCGCACTCCAGCAG 100 77
LQ332_RS02075 NONE
LQ332_RS02070  452484 ..  452531 - -26.6  -3.35371   CAGATCGCGAATCAA TTC-GGGGTCAGAGCCGTTTTCC CAG GGAAAACGGCTCTGACCCCAGGA GCATTCCGGCAGACC 100 128
LQ332_RS02055 NONE
        tsaE  447822 ..  447834 -  -2.6  -2.76263   CTCAGGATTCAATCA                CCGC GCTGA ACGG                AATGCAACACCTTTT  38 78
LQ332_RS02045  446199 ..  446228 - -17.3  -4.05033   TCGACGCTACAGAAA       GC-AGTAACCCGCC TTC GGCGGGTTACTTGC       TGCCGCCGGCCATGG 100 18
        mutL NONE
LQ332_RS02035 NONE
LQ332_RS02030  442201 ..  442221 - -19.7   -4.4078   CGGCGGGAACGAAAA            CGGCGCGCC CCT GGCGCGCCG            TTTTGCTTGGAACCA 100 54
        htpX  438763 ..  438783 - -15.4  -4.08557   GCGCGCAAACAAGAA            CGCCCGGC ACGGA GCCGGGCG            CCTCTCACTCCTCTG  95 52
LQ332_RS02000 NONE
LQ332_RS01995 NONE
LQ332_RS01990  433031 ..  433049 -  -8.8  -2.90075   GCGGGGTCAATGACA             GCGTGCAG GCC CTGCACGA             CCTGAGCGAGCGCAG  53 294
         efp  431468 ..  431503 - -17.7  -2.69964   TGCCGAAGCAGATCA   CGGG-A-GCGCCAGCGC GAAT GCGCTGGCGCGTACCCG    GCCAGCGGCCGGCAC  84 70
LQ332_RS01975 NONE
        ubiG  429245 ..  429265 -  -6.8  -3.53224   CACCGCGCGCGGAAA            GCCGGC GGCGGTCAT GCCGGC            TTGACCGCGTAGGCC  57 16
LQ332_RS01965 NONE
LQ332_RS01960  427758 ..  427788 -  -8.3  -3.46068   GCTGGAACGCAAATA      GCGGTACTGCCGGCC GCT GGCCGGCA--ACCTC      ATCCTCTTCGGCGCC  62 85
        dksA  423763 ..  423778 - -11.8   -5.4505   TCCGCCAACAAAAAA              CCCGGC CAAG GCCGGG               TTTTCTGCATGACCA 100 56
LQ332_RS01920  419339 ..  419356 - -12.7  -5.37593   GCGGAAACGAAAAAA             CCCAGCC GGCG GGCTGGG              TTTTTTTCGGACGAA 100 214
LQ332_RS01915  418127 ..  418139 -  -4.8  -2.64099   TTGGGGGATGAGAAT                TCGG TAGAG CCGA                CCATTGGTCGGCCGA  43 102
LQ332_RS01910  416776 ..  416807 -    -5  -3.54424   CCGTAGGGTTCGAAA      TCGGTAGTGCCGGCC GCT GGCCGGCTCCGC-AA      TGATCCAGCCGCGCC  53 118
LQ332_RS01905 NONE
LQ332_RS01900 NONE
LQ332_RS01895 NONE
        argC NONE
        argH NONE
LQ332_RS01880 NONE
        proB NONE
LQ332_RS01870  408662 ..  408678 - -12.3  -2.74523   CTACCGCGAAGAGCA              TCCACGC AGG GCGTGGA              TCTGTTTATGTACGC  65 31
        cydD NONE
        cydC  393946 ..  393956 -  -8.2  -3.41051   GTATGGCCACGACAA                 GCGC GCC GCGC                 AGCGCAAGCAGTGGC  61 311
LQ332_RS01750 NONE
LQ332_RS01745  383566 ..  383606 - -12.7  -2.52464   CTGCCGGCGAATCTA GCAGCGCGCACG--TGCAC GTTGG ATGCAGGCGCGCGCGCTGC GTGGCAGGCATTCAG  67 57
LQ332_RS01740  383034 ..  383064 - -18.4  -3.16881   GACGGAGGGGATTAA       GTCGCTTTCGCCCC TTT GAGGCAAAAGCGAC       TTAATCCCCTCCGTC  89 54
LQ332_RS01715 NONE
LQ332_RS01710  378120 ..  378159 -  -5.7  -4.37534   AAATGGACATGAAAA TCTGTCCGTGGCGCGGCCC GCAG GGACCG-GCCATG-ACAGT  GCGGGACAAGGGCTC  73 39
LQ332_RS01705  376976 ..  377003 -  -4.8  -3.85437   AAAAAAAAGAAGGAA        CGCC-TCTGGC TTCAACG GCCGGATGGCG        GAGTGGTGGAATCGC  60 9
LQ332_RS01700  373689 ..  373703 -  -7.1  -5.00616   TGTGTGCTTAAAAAA               CCACG AAAAA CGTGG               CCTGACATCGCGATC  91 177
LQ332_RS01695 NONE
LQ332_RS01690 NONE
LQ332_RS01685 NONE
LQ332_RS01680 NONE
LQ332_RS01675 NONE
LQ332_RS01670  364797 ..  364831 -   -23  -4.09685   TTTGATCGCGTAAAA     CGAAACGGCGGGGATC GAT GATCCCCGCCGTTTCC     GTTTGTGACCCTGGT 100 86
LQ332_RS01660  360148 ..  360177 - -12.2   -3.9693   GATCTACCCAAACAA       GGTAGCGGCCAGG CCTGC CCCGGC-GCTACC       CGGTCATTGTCAGCG  84 35
LQ332_RS01640 NONE
LQ332_RS01635  355942 ..  355958 - -12.3   -2.8655   TGGATGCACAGTAGA              TCCACGC CCT GCGTGGA              TGCGCCGTCCTAGCG  66 35
LQ332_RS01620  354091 ..  354120 - -22.3   -3.0263   ACGACTGCTGCAACA       GAAAAGGCCGGGG TCTC CCCCGGCCTTTTC        CGTTCATCCCGTCAC 100 46
LQ332_RS01610 NONE
LQ332_RS01605  350373 ..  350391 -  -4.4  -3.10112   ACCGAAGCCATGGAA             CTGTCTCC TGC GGCGACTG             CGTGGATGGTGCGCA  45 432
LQ332_RS01595 NONE
LQ332_RS01590 NONE
         cfa  347912 ..  347931 - -16.4  -3.84451   GGCCTGAAACGGAAA            CCGCCCGG GAGA CCGGGCGG             TTTTTTTTGTTGTGA  93 106
LQ332_RS01575  344891 ..  344935 -  -7.8  -4.09864   ACTGAGCCCGGAAAA CGACCGCGCGATGATCTGCGG CAGC CCGCAGATGCTCGC-CGACCT GCGTACCGTGCTCGA  69 195
LQ332_RS01550  338994 ..  339012 - -13.1  -3.70773   CTCCAGATGCAACAA             CGGCGCC ACACG GGCGCCG             TCGTCTGGATCGAAG  84 50
LQ332_RS01545  338504 ..  338560 -  -3.4  -3.00298   TTGTCGAACCATACA GCGTGGTGCTCATGCGGCGGATCC TGTGCGGGT GGACCGGCCGATTATGCGCCTCGC CGATGAGCGCTGCTC  42 39
LQ332_RS01540  337817 ..  337872 - -42.4  -4.27316   TCCTGTAACGGAAAA GGGGACGGAGGGGATTAAGTCGTTTG TGCA CAAACGACTTAATCCCCTCCGTCCCC TTTTCTGGTTACCGC 100 34
LQ332_RS01520  335221 ..  335238 - -14.1  -4.86621   ACCGGCAACGAAAAA             GGCCCGC TTGC GCGGGCC              TTTTTCGTGCCGACG 100 52
LQ332_RS01505  333110 ..  333137 -  -6.2  -4.21908   GATCACCACGGAAAA        CGCACGGCGGC TGTTCGC GCTGCCG-GCG        CTCTAACGGTACTGC  70 109
LQ332_RS01490  331104 ..  331125 - -18.7  -4.63218   CCGGCTGCAACAAAA           CGGGCCGGC ATGT GCCGGCCCG            TCGGGTACTGCGGTT 100 49
LQ332_RS01485  330448 ..  330468 - -12.5  -2.54896   GCTGGATCCAAGCGA            TTGCCGGCC AGC GGCCGGCAC            TACCAGGCCACGCTC  64 39
LQ332_RS01480  329542 ..  329574 -  -2.1  -2.78816   GGATCCGGGACCACA     GCAAACATCGAACAC CCTCC GTGT-CGTTGTT-GC     ATTCCGCCGGGCGTA  40 62
LQ332_RS01475 NONE
        asnB  325326 ..  325347 -  -2.1  -2.73875   GGCCGGTGAAGATCA           GCGC-CTCGC AAT GCCTGCGCGC           ACGTCGCGCCAATGC  38 1
LQ332_RS01465  324624 ..  324674 -   -13    -3.272   ATTATCGCAGATCAA CGTCCCGGGATCGGAGCCCGTCGC TGC GCGTCAGGATCCGCCCCCCAGGCG CGGCCGGGTCGTCCG  74 47
LQ332_RS01460  323011 ..  323021 -  -3.2  -2.72324   GTTACTCAAACGAAC                 CGAC CGA ATCG                 TGGGCCAGGTTGTCA  40 1
LQ332_RS01455 NONE
LQ332_RS01450  318892 ..  318909 -  -5.6  -3.53012   TGCGCCGCCGGCAAA             CGGTTT GCGACG AAACCG              GGCTGGCGGCGATGA  55 107
LQ332_RS01445 NONE
LQ332_RS01440  318295 ..  318310 - -11.8   -4.8048   CCCGGATATGAAAAA              CCCCGC CTCG GCGGGG               TTTTTTGTTGCCCGT 100 71
LQ332_RS01405  306347 ..  306365 - -17.4  -5.00616   CCGTCGCTGAAAAAA             CGCCGCCC CCG GGGCGGCG             TTTCCTCTTGTAGAG 100 73
LQ332_RS01365  300767 ..  300809 -  -5.5  -3.10579   GCGCGAAAAGAAGCA TTGTCGCACGCATGCCGTCG ATGT CGA-GGCATCCGTGCCGCAT ATCAATGCGTGGCGG  49 27
LQ332_RS01360 NONE
LQ332_RS01355 NONE
LQ332_RS01350 NONE
LQ332_RS01345 NONE
LQ332_RS01340  295189 ..  295216 -  -5.4  -3.02511   GTCAGCTGTGGAAGA        TCGACGACGGCC GCAC GGCCTTCCTCGC         CGGCAGCGGCTTCGC  46 132
LQ332_RS01315  287950 ..  287966 -  -3.6  -3.01791   ATCGTTCGGCCAAGA              GCACGG CGCAT CCACGC              GTGGCGCTGATCTAC  42 79
LQ332_RS01310  287518 ..  287539 - -17.3  -4.54727   GCGCTGAAACGAAAA           GGCCCCGGA GCGA TCCGGGGCC            TTTTTTGTTGCCGCT 100 88
LQ332_RS01290  277080 ..  277107 - -22.8  -2.52896   CTACCCGGCAATGCA        GAACGGCCCCGC TTTC GCGGGGCCGTTC         CGGTTCACGCATGCC 100 65
LQ332_RS01285  276190 ..  276200 -  -5.4  -5.00884   ATTGTCCTCAAAAAA                 CGAA CTG TTCG                 CTCAGGATCCGGTCT  85 7
LQ332_RS01280  274937 ..  274949 -  -4.7  -2.70932   GCGCGGCCGCAATGA                GCTGC AGG GCGGC                GATGCGTTCGGCCCG  43 266
LQ332_RS01215  264138 ..  264158 -  -5.3  -2.86271   GCGCCAGCAGAACGA            TCAGGTCCC GCC GGGCCCTCA            GGCCTTGTCGGCGTC  45 23
        rpsF NONE
        rpsR  263237 ..  263279 -  -9.8  -3.02043   AAGGCTGTCCGAATA GCTGGCACAGCGGGGGCGGC ACCGG GCCGCCCC-GCCGGG-CATC AGACGTCGTGGTTGT  59 24
        rplI  262663 ..  262694 - -18.8  -4.43501   AACGGAGCCATAAAA      CAAAACGGGCACCC TTGC GGGCGCCCGTTCTG       CGGTGATGCCAGGCC 100 54
         smc  258950 ..  258975 -  -3.8  -2.75712   TCATTCAGGTAACTA         GGATGGCACG TCAGGC CGCGCCCGCC          AATCGCGCGGCTTCT  42 10
        zipA  258014 ..  258046 -  -4.8  -3.05463   ACGGTCGGCACCGAA     GGCGAGATGGCC-GCG TTC CGCCGGGCGT-TCGCC     AAGGTGGCCGGCGTA  47 152
        ligA NONE
LQ332_RS01175  253814 ..  253826 -  -4.7  -2.62184   GCTTCGCTCACAGGA                TGCCC TCC GGGCG                CGGATGGTCCAGTGG  43 5
        epmA  252843 ..  252859 -  -4.3  -3.86015   TACGGTGTTCAGAAA              GGCGCGA CGG TCACGCG              TGGGCGAAGTCGAAT  58 19
LQ332_RS01165  251991 ..  252002 -  -5.8  -2.52464   CCCGGGCTCAATTCA                CCGA GAAT TCGG                 CGCGGCAGCCGCCGT  45 6
        mtnA  250809 ..  250838 -  -9.9  -2.59482   CAAATCAGGAACTTA       GGGGGTTGCCGGCC AGC GGCCGGCA-CTACC       GGGGCGGCGGTCGCG  55 58
        gyrA  247890 ..  247914 - -18.6  -2.62983   GGCATCCGGATACGA          CGACGCCGGC ACAGG GCCGGCGTCG          TCGGGTACCTCAGGC  86 52
LQ332_RS01150 NONE
LQ332_RS01145  244068 ..  244081 -  -4.5  -3.01712   TTCGTCGGGGGAAGA               CCTAC TTCA GCAGG                TCCGATTCGGTCGGG  44 13
LQ332_RS01140  242342 ..  242389 - -14.8  -2.87931   GTGACGCTGTAGACA CCCTTCCGGCAGCGACGGACCCA CAG CGGGCACGTCGCTGCCGCA-GGC TCAGGCCATTGAAGG  77 26
LQ332_RS01125 NONE
LQ332_RS01120  238609 ..  238632 - -11.8  -3.21925   ACACCTGATGACGAA          GATGGTG-CGG GTC CCGGCACCATC          CGAGTGACATCGATC  71 157
LQ332_RS01105  236867 ..  236908 - -20.9  -2.91144   GGATGGGGCAAAGCA CCACACC-GGCAGGCGCCGG CCG CAGGCGCCTGCCAGGCATGG CCTGGCACTACTGCT 100 33
LQ332_RS01100  234259 ..  234282 - -18.2  -3.54436   CACATACCGATACAA          CAAGGCCGCC CGGA GGCGGCCTTG           GCGTTCTTCACTTGG  93 33
LQ332_RS01095  232248 ..  232269 -  -3.7  -4.30844   ATCGCACGAGCAAAA           CGCAG-ATGC ATC GCATTCTGTG           AAGCCTGCGCCTCTC  66 49
LQ332_RS01090  231755 ..  231774 -  -4.2  -2.94416   CACCCGCATCACATA            CGGTTACG CAAT CGCAACGG             CCAATGACACGAGGT  44 9
LQ332_RS01085  231171 ..  231190 -  -3.4  -3.68302   CGAACAGGCCAACAA            CCCGGACC GCTT GGCCTGGA             TTGCCGACTATGAAA  55 193
LQ332_RS01075  229259 ..  229272 -  -2.3  -3.14931   TCGACCTGCGATCAA               CGTGC CGCT GAACG                TGCCGCCACGCCGGT  42 8
LQ332_RS01070 NONE
LQ332_RS01065  227272 ..  227296 -  -9.9  -3.28712   GGCGCTGCGCGAGAA          GTGGGCACCGA TCG TCGGTGCCGGC          ACCATCCAGTTCCGC  63 329
LQ332_RS01055  226222 ..  226244 -  -5.5  -4.07568   TGGGCTGGGTGAAAA           GCGGCACGA GCGCT TCATGCAGC           CGCCAGGGGGCGGGA  66 187
LQ332_RS01050  225074 ..  225119 -  -9.5  -3.14211   ACGCTTCGGCAGCAA CCGCCTGCCCGGCCTGCCCCGC CAC GCGTATCAGGCCGAGCTG-CGC TTCGATCACGCCTCG  60 368
LQ332_RS01015 NONE
        hutC  213614 ..  213664 -  -9.5  -2.72661   GAGCATCCCCAAGCA CGCCCGCCACCGCGACCTCGTCGCC GCA GG-GT-GTGGCCGCGCCGGCGGTCG ACCCACGCAGCAATC  56 401
LQ332_RS00990  210807 ..  210859 -  -8.4  -3.14344   GAGCGTGCCGACCAA GGTCGGCACCCACCAGAGCTG-ACCC TCC GGGTTCAGATC-AGCGCGCGCCGAAC CAGAGCAGCAGGCTG  57 10
        serC NONE
        pheA  208233 ..  208249 - -15.1  -3.56092   CGATCATTCCGTAAA              CGCCGGC AAC GCCGGCG              ATGCATCAGGGAGCG  87 66
        aroA  206682 ..  206694 -  -7.7  -3.28924   GAGCGCCGTGCAGAA                CTGGA AGT TCCAG                CCGGCGATGCATGAG  55 237
        serS  203990 ..  204002 -  -9.1  -2.94218   ATCCTCCAGTAGATA                CACGC CAT GCGTG                GATGCGGTGCCATGC  59 68
LQ332_RS00945  201586 ..  201604 - -17.4  -3.37493   GCCGGAATACAGCAA             CGCCGGGC ATG GCCCGGCG             CTACCTTCCTGCTTT  93 42
LQ332_RS00935  200250 ..  200267 -  -7.7  -5.42514   GCAGAAACGAAAAAA             GCTCCTA TCCC CAGGAGC              TTTTTGAAATTGGCG 100 36
LQ332_RS00930  198551 ..  198571 -  -8.2  -2.56596   CCGCCCAGTAATTCA            CGCCCTGA GTGGA TCGGGGCG            TTGGTCAGCATACGG  53 123
LQ332_RS00915  193771 ..  193805 -  -3.2  -3.70109   GACATGATGCAAGAA     GCCGGCGGATCGAGAG ATC CCCACGCACCGTCCGC     CATGAACTGGCAGGC  54 396
LQ332_RS00910  193265 ..  193275 -  -4.6  -3.39529   TCAACGGAACAGGAA                 CCGC ATC GCAG                 CCCTTCATGGAACCA  51 30
LQ332_RS00905  192336 ..  192352 -  -5.8  -2.70932   TTCTTCCTTGAATCA              CCGATC ACTTG GACCGG              GTGCGCGCGATGACG  46 13
LQ332_RS00900  190939 ..  190985 - -11.5  -3.28924   TACCGCTTCTGAGAA GGCCTTCCAGCAGAGCCG-GCG CGCC CGCTCGGCTCTGCTGCGTAACC TCAGCCCATCCGCAT  68 26
LQ332_RS00885  186402 ..  186428 - -14.5  -2.75712   TTACTCATTGAAGCA        GCTGGCCTCGGT GATG ACCGAGGCC-GC         GCGCCGCGCGCCGGC  70 68
LQ332_RS00845  180812 ..  180844 -  -6.2   -3.7941   GATGCTGGACAAGAA     GCGCAG-GACCGCCG TCGC CGGCAGCCACTGAAC      ATTGCGCCGGATCGT  60 40
LQ332_RS00830 NONE
LQ332_RS00825  176912 ..  176925 -  -3.1    -3.154   AATCCATGAACAAAT               GCCAA ATTC TTGAC                CGAAATCACGAATTC  43 85
LQ332_RS00820  176053 ..  176067 -  -3.4  -3.45571   CTGCTGAAACATCAA               TGGGCG TGG CACCCC               TCCGACAGGCGCGGG  49 72
LQ332_RS00815 NONE
LQ332_RS00810 NONE
LQ332_RS00805 NONE
      virB11 NONE
LQ332_RS00795  170844 ..  170867 - -10.2  -3.29549   ACTAACACAACTGAA          TCGGCCAGCC GGGG GACTGGCCGC           ACCACGACTTCGTCA  65 38
LQ332_RS00790 NONE
LQ332_RS00785  170054 ..  170083 - -20.7  -4.44915   CAAGGAGTTACAAAA       GACCCGGCGGGCG CGGA CGCCCGCCAGGCC        GGATCCGGACCTCAA 100 37
LQ332_RS00780 NONE
LQ332_RS00775 NONE
LQ332_RS00770  165431 ..  165442 -  -2.2  -4.33105   TAACGAGCAGCAAAA                GCAC GACA ATGC                 ACTTCATACGCACAC  65 70
LQ332_RS00760  163525 ..  163546 -  -7.2  -5.93809   GGCGCAGAAAAAAAA           CAGCCCGC TCAACG GCGGGCCA            TTCTATCGCCGCATC 100 64
LQ332_RS00755  162674 ..  162690 -  -6.5   -4.0825   GGTCCAACGAAACAA              CCGGG GCGCTAG CCCGG              CGCTATCCTCGCTTC  68 39
LQ332_RS00750  161256 ..  161276 -  -3.8  -2.56596   CCCGGGACGAAGTCA            TGCCGGCC TCCGT GGCCTGCC            GCAACAGCAACGACT  41 114
LQ332_RS00745  160267 ..  160293 -   -18  -2.78679   GCGTCGTACGTAAAG         CGCCAGCGGGCA CCC TGCCCGCCGGCA         TCGGTGTTACAGGGA  89 32
LQ332_RS00740  158849 ..  158891 - -13.4  -3.06315   CCAACAGCTGGAACA GCAGCAGCATCAGACCCGCA GCC TGCAGGCCTGATGGCGGCGC GGGAGCCACTCACCC  72 69
LQ332_RS00720  155418 ..  155451 -  -8.7  -2.62616   CGAGGGCTGAGATCA     GCCCCGGCGGCGG GGGTCAAT CCACGGGCGGGGC      GTTTGCCTCGAATGC  53 8
LQ332_RS00705 NONE
        tadA  153075 ..  153091 -  -2.2  -2.94032   ACCGGTGAAGGAAAG              GGGCAC CCATC ATACCC              TGTCACCCCTCAGCC  41 35
         orn  152315 ..  152341 -  -3.6  -2.70932   TGTCGCGGGGAAGCA         GGATCGGCTC GTTCATG GCGCCGATCT         TAGCGCCCGGTAGTT  40 138
LQ332_RS00690  151437 ..  151456 -  -5.6  -3.75153   CCTTTGCAACGCAAA            GGGCTCCG ACCC CGAAGCCG             GTTACAGCGTGGGTT  60 27
LQ332_RS00685  150087 ..  150120 -  -7.5  -3.28712   GCTGGTGCGCGACAA    GCCG-TGATCCGGCA GTGGAA TGCCGG-CCAGCGGC     CGGCAGCGCCCAGGA  57 41
LQ332_RS00665  144817 ..  144832 -  -5.4  -3.32769   CGGGGAAACGATCAA              TACAGC TCGC GCTGCA               GCCCCAGCGTGGCCA  51 6
LQ332_RS00660 NONE
LQ332_RS00655  143390 ..  143433 - -10.4  -3.92373   GAGGCGATGCACAAA TATTGCCCGGGTAAT-TTGTC GAC GTCAATATTGCCCGGGCATTA ATTGGCCGGAAAAGC  75 79
LQ332_RS00650  142684 ..  142717 -  -2.1  -2.73701   CGCCAGCAAAGCAAG     CACAGGGGAGCGGGC CGTG GCCCGCGATCAGGTG      GCGCCGCCGCGCGAC  38 55
LQ332_RS00645  140836 ..  140885 -  -4.2  -3.22298   CTCACGGAGCATCAA GGCCCA-CAG-GTTACCGCGAGCG CCGC CGCTGGCGACAGCGCTGACGGGGC CCACCCTTCACCGCC  47 408
LQ332_RS00640 NONE
        phaE NONE
        phaC  138072 ..  138087 -  -4.6  -4.58395   TCGACGCTGCAAAAA              CGAAGC AGGC GCTACG               CGTCGCGTGCCTTCA  74 21
LQ332_RS00625  137619 ..  137640 -  -5.1  -3.57144   TGGGCTACGGGGAAA           GCAGTCGGGC ATG GCTCGACT-C           TACACCGCGCCCCTG  55 42
LQ332_RS00620 NONE
LQ332_RS00615  136647 ..  136663 -  -9.4  -4.71222   AGATCAAAAGCAAAA              GCAGCC TGGCC GGCTGC              TTTGTTGCTACCTGT  88 302
LQ332_RS00610  135845 ..  135855 -  -4.6  -2.52676   CATTCTGGCAATCCA                 CGAC GGA GCCG                 GACAAGGCATTGACA  43 173
LQ332_RS00605  133368 ..  133400 - -14.1  -3.52113   GGGGAAAACCGACAA      GTCCCCCGCCACG AGTCAAG CGTGACGGGGGGC      ACGATCCTCAACTGC  81 33
LQ332_RS00600 NONE
LQ332_RS00595  130292 ..  130326 -  -9.3  -3.51825   CTACCGCAACTACAA    CGCTGCGG-ACACGGC GATG ACCGTCTACCACAGCG     ACTTCGGCGCGGCCC  61 345
LQ332_RS00585  126785 ..  126812 -  -9.8  -2.90194   AGCGGCTCAACGATA        CGTACGGCCACCC GGT GGGCGACCGC-CG        CCTGCAGGCGGTCGC  57 380
LQ332_RS00570  124249 ..  124272 - -10.3  -3.14931   CCGATGCGCTACCAA          TGCCGGCTC CCGGAC AAGCCGGCA           CGCAACGACGTGCTA  60 513
LQ332_RS00560  123189 ..  123206 - -12.7  -4.11484   GCCAATTCTTGAAAA             CCCCGAC CCTG GTCGGGG              TTTTTCTTTGCCTGT  89 98
LQ332_RS00520 NONE
LQ332_RS00515  119688 ..  119714 -  -2.1  -2.90571   AACTCCGTAATGAGA        TGCCCGC-GCAG GCTA CCGCAGCCGGCG         CAGTTTGTGTTCAAG  40 11
        dsbG  118769 ..  118801 - -18.6   -4.2558   CATGCGCCAGGAAAA     CAACAGGCCCGCATG CTGC CATGCGGGCCTGT-G      CGTTACATCACGCTT 100 51
LQ332_RS00505 NONE
        adiC  115461 ..  115473 - -10.5  -2.52933   GTCGAACTCAGGAAT                GCCGG GCG CCGGC                GCTGATGGCCGAGGC  58 5
LQ332_RS00495 NONE
LQ332_RS00490  112177 ..  112233 -  -9.2  -4.34402   TGCTGCACACGAAAA GCAG-CCACGCAGGGACCCGGCCCCGC AGAA GCAGGTTCAGGTCCACGCCGGGTCTGC GGTGAAATCGATGGT  83 5
        ptsJ  103218 ..  103263 -  -3.3  -3.47227   GGTCAAGCACCAGAA CAACACCGGC--GCCATGCTCA CCTCC TG-GCAGGGCACGCCGGAGCTG ATGTTCATCGATGAC  49 119
LQ332_RS00415   93590 ..   93645 -   -41  -4.34402   TTCGCCATATGAAAA GGGGACGGAGGGGATTAAGTCGTTTA TGCA TAAACGACTTAATCCCCTCCGTCCCC TTTTTCAGGCACGGC 100 66
LQ332_RS00405 NONE
LQ332_RS00400   90811 ..   90832 -  -8.7  -3.14132   CCCGGGGCGCATGAA           GTTGCCGGCC AGC GGCCGAC-AC           TACCCGGTCAGGCCA  57 33
LQ332_RS00395   88476 ..   88498 -    -9  -3.03243   ATGGACCGTCGAACA           GGCCGCCGCC GCC AGCGGCTACC           GCCACCCCAGCAACT  55 234
LQ332_RS00380 NONE
LQ332_RS00375   84651 ..   84668 -  -9.1  -2.53263   TGGAGGCGGAATGTA             CCCACCG CAGG CGGTGGA              TGGCCGTGGCTGGCG  55 203
        lldP NONE
        lldR NONE
        lldD NONE
         dld   78934 ..   78944 -  -2.4  -3.64703   GCCTGTCCAGCGAAA                 GCGG TGC CGGC                 CTGGTCAACCCGATC  50 386
LQ332_RS00345   77883 ..   77908 - -11.2  -3.07113   CAGCAGCTCACGGAA         CAGGCACGGCG GACAG CGCCGTGC-TG         CATTCTAGCCAGTGC  66 51
LQ332_RS00340   76676 ..   76689 -  -2.3  -3.71848   GGCGTTGACGAAGAA               GCACG CTTC CTTGC                CAGCGTCTATCGTTC  53 422
LQ332_RS00330   73507 ..   73537 - -21.2  -2.93382   GCGGATATCGACACA       GCAGAAGGCCCGGC ATT GCCGGGCCTTCTGT       TTGCCAGCCGGATCA 100 38
LQ332_RS00320   71436 ..   71452 -  -7.9  -4.09685   CGGCAGGCGGGAAAA              CCGGCGA GCA TGGCCGG              CGCTGCAGCGGTTGG  71 53
LQ332_RS00310 NONE
LQ332_RS00305   68037 ..   68091 - -23.8  -2.62184   CGCCCGCTCACACCA TCCACGCATGGCGTGGATCT-CCTG ACGATA CGGGTAGCTCCACGCCATGCGTGGA TTCCGTTCGAGGCCA 100 86
LQ332_RS00295   65703 ..   65757 - -21.1  -3.74077   TGTCAGATATCGAAA TACATCT-GGGGTCAGATCCGTTTTCC TCC GGAAAACGGATCTGACCCCGAGA-GCG GTTCCAACAGACCGC 100 73
LQ332_RS00280 NONE
LQ332_RS00275 NONE
LQ332_RS00270 NONE
LQ332_RS00265   59757 ..   59802 -  -8.2  -2.55074   TGGAAGTGGAATCGA GTGCGGCAGCGGC-GCGACCGGC CAG GCCGAGCGCAACCGCGGC-GC-C GCTGGCCAGCATCAC  53 73
LQ332_RS00260 NONE
LQ332_RS00255 NONE
LQ332_RS00250   54946 ..   54974 -  -6.5  -2.71144   CATCCGTCGTAATCA        CGCACCGCCGGCC AGC GGCCGGCTCTACC        CGTGGCGGGTCAGAT  48 35
LQ332_RS00230   52780 ..   52797 - -14.1  -2.63596   CGGCATTGCACACGA             CGGCGCC CCAG GGCGCCG              TTGTTGTTTCCGGCA  70 57
LQ332_RS00160   38291 ..   38337 - -10.3   -3.7732   CCCGTAGACGAACAA CTGGAATGTCAGTGGACTTGCC GCGA GGCAGGTG-ACTGACATTTCAG CGGTTGCAACGGATC  74 189
LQ332_RS00155 NONE
LQ332_RS00150   31126 ..   31146 -    -4  -3.30701   GCGCAGGAAATTCAA           CG-CGGC-TG CGC CATGCCGGCG           ATCTGCACGCGCCGG  49 1
LQ332_RS00145 NONE
LQ332_RS00135   28905 ..   28934 -  -8.4  -3.01712   TGCGCGGCCTGAACA       CGGCCGCCACCC TGTGGT GCTCGGCGGCCG        TTGGCAGCTGCACCG  55 419
LQ332_RS00115   23437 ..   23486 -  -8.4  -2.52896   CGAGCGCGTAACCCA GCGCCGCGGCACACCGCCGGAAC CGACC GCCCCAG-GGTGGGCCGAGGCAT CGGGGTGAGGTCGTG  53 65
LQ332_RS00105 NONE
LQ332_RS00100   21184 ..   21225 -  -3.5  -3.55563   AGGTGACTTCGCAAA TCGCGCACCGGTGC-CGCCA TGC TCGCGAGCCGCCACGCGCGA AAAGACCCGGTGCTA  49 38
LQ332_RS00095   20711 ..   20733 -  -4.7  -2.52464   TCGGGTTTGAACGCA           CGCGCCGGA ACAGG TCCGGACCG           CGCGCGCCATCCCAT  43 40
        betT   18061 ..   18086 -   -19  -3.18264   GTTCTGATGCACCAA         CGGGGCGGCG GTGATG CGCCGCCCCG          TCCGCGTTGCCGGCC 100 514
LQ332_RS00075 NONE
LQ332_RS00070 NONE
LQ332_RS00065 NONE
LQ332_RS00060 NONE
        mntR    7401 ..    7413 -  -6.9  -3.83026   CCTTTCCACAGGAAA                GGGCC CTG AGCCC                GACCTCCCTGCCCAC  64 90
LQ332_RS00040 NONE
LQ332_RS00035    3847 ..    3877 -  -8.2  -3.45023   GGACGACGACGAGAA      CGCC-CCACCCCG CATCGC CGGTGCGGTGGCG       CATCTGACCTGTACC  61 525
