locus-tag class description LQ330_RS00010 PF00756 Putative esterase LQ330_RS00020 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS00020 PF00107 Zinc-binding dehydrogenase LQ330_RS00025 PF02583 Metal-sensitive transcriptional repressor LQ330_RS00035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS00035 PF03466 LysR substrate binding domain LQ330_RS00040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS00055 PF03466 LysR substrate binding domain LQ330_RS00055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS00060 PF00107 Zinc-binding dehydrogenase LQ330_RS00060 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS00065 PF04107 Glutamate-cysteine ligase family 2(GCS2) LQ330_RS00075 PF12833 Helix-turn-helix domain LQ330_RS00075 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQ330_RS00080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LQ330_RS00080 PF00753 Metallo-beta-lactamase superfamily LQ330_RS00080 PF10996 Beta-Casp domain LQ330_RS00085 PF01926 50S ribosome-binding GTPase LQ330_RS00090 PF00034 Cytochrome c LQ330_RS00095 PF01323 DSBA-like thioredoxin domain LQ330_RS00100 PF01323 DSBA-like thioredoxin domain LQ330_RS00110 PF00892 EamA-like transporter family LQ330_RS00115 PF01037 Lrp/AsnC ligand binding domain LQ330_RS00125 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS00125 PF00593 TonB dependent receptor LQ330_RS00130 PF00593 TonB dependent receptor LQ330_RS00130 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS00140 PF02472 Biopolymer transport protein ExbD/TolR LQ330_RS00145 PF01464 Transglycosylase SLT domain LQ330_RS00145 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LQ330_RS00150 PF01743 Poly A polymerase head domain LQ330_RS00150 PF01966 HD domain LQ330_RS00150 PF12627 Probable RNA and SrmB- binding site of polymerase A LQ330_RS00185 PF16168 Adhesin of bacterial autotransporter system, probable stalk LQ330_RS00185 PF03797 Autotransporter beta-domain LQ330_RS00185 PF13018 Extended Signal Peptide of Type V secretion system LQ330_RS00200 PF01979 Amidohydrolase family LQ330_RS00205 PF01380 SIS domain LQ330_RS00210 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS00215 PF07690 Major Facilitator Superfamily LQ330_RS00220 PF02685 Glucokinase LQ330_RS00230 PF07691 PA14 domain LQ330_RS00230 PF02838 Glycosyl hydrolase family 20, domain 2 LQ330_RS00230 PF00728 Glycosyl hydrolase family 20, catalytic domain LQ330_RS00250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQ330_RS00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS00260 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS00265 PF00072 Response regulator receiver domain LQ330_RS00270 PF01590 GAF domain LQ330_RS00270 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS00270 PF08446 PAS fold LQ330_RS00270 PF00360 Phytochrome region LQ330_RS00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS00275 PF04972 BON domain LQ330_RS00280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ330_RS00280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQ330_RS00285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LQ330_RS00285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQ330_RS00300 PF03572 Peptidase family S41 LQ330_RS00300 PF17804 Tail specific protease N-terminal domain LQ330_RS00300 PF00595 PDZ domain LQ330_RS00300 PF11818 C-terminal domain of tail specific protease (DUF3340) LQ330_RS00305 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LQ330_RS00305 PF04055 Radical SAM superfamily LQ330_RS00310 PF03099 Biotin/lipoate A/B protein ligase family LQ330_RS00315 PF04359 Protein of unknown function (DUF493) LQ330_RS00325 PF00768 D-alanyl-D-alanine carboxypeptidase LQ330_RS00325 PF07943 Penicillin-binding protein 5, C-terminal domain LQ330_RS00330 PF05036 Sporulation related domain LQ330_RS00330 PF03330 Lytic transglycolase LQ330_RS00335 PF13406 Transglycosylase SLT domain LQ330_RS00340 PF01098 Cell cycle protein LQ330_RS00345 PF01098 Cell cycle protein LQ330_RS00350 PF03717 Penicillin-binding Protein dimerisation domain LQ330_RS00350 PF00905 Penicillin binding protein transpeptidase domain LQ330_RS00360 PF04085 rod shape-determining protein MreC LQ330_RS00370 PF00294 pfkB family carbohydrate kinase LQ330_RS00395 PF11838 ERAP1-like C-terminal domain LQ330_RS00395 PF01433 Peptidase family M1 domain LQ330_RS00400 PF01209 ubiE/COQ5 methyltransferase family LQ330_RS00425 PF02321 Outer membrane efflux protein LQ330_RS00430 PF00873 AcrB/AcrD/AcrF family LQ330_RS00435 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS00435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS00440 PF08361 MAATS-type transcriptional repressor, C-terminal region LQ330_RS00440 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS00445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ330_RS00445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQ330_RS00450 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS00450 PF07724 AAA domain (Cdc48 subfamily) LQ330_RS00450 PF10431 C-terminal, D2-small domain, of ClpB protein LQ330_RS00455 PF00227 Proteasome subunit LQ330_RS00460 PF02899 Phage integrase, N-terminal SAM-like domain LQ330_RS00460 PF00589 Phage integrase family LQ330_RS00470 PF01678 Diaminopimelate epimerase LQ330_RS00480 PF04304 Protein of unknown function (DUF454) LQ330_RS00485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LQ330_RS00485 PF00326 Prolyl oligopeptidase family LQ330_RS00490 PF00155 Aminotransferase class I and II LQ330_RS00495 PF00326 Prolyl oligopeptidase family LQ330_RS00495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LQ330_RS00510 PF01381 Helix-turn-helix LQ330_RS00520 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS00525 PF00005 ABC transporter LQ330_RS00525 PF09383 NIL domain LQ330_RS00530 PF00892 EamA-like transporter family LQ330_RS00535 PF04461 Protein of unknown function (DUF520) LQ330_RS00545 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS00545 PF00107 Zinc-binding dehydrogenase LQ330_RS00550 PF00171 Aldehyde dehydrogenase family LQ330_RS00565 PF01432 Peptidase family M3 LQ330_RS00575 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS00580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ330_RS00590 PF00571 CBS domain LQ330_RS00590 PF01380 SIS domain LQ330_RS00595 PF01380 SIS domain LQ330_RS00600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS00605 PF00005 ABC transporter LQ330_RS00610 PF00005 ABC transporter LQ330_RS00610 PF02687 FtsX-like permease family LQ330_RS00610 PF12704 MacB-like periplasmic core domain LQ330_RS00615 PF12704 MacB-like periplasmic core domain LQ330_RS00615 PF02687 FtsX-like permease family LQ330_RS00615 PF00005 ABC transporter LQ330_RS00625 PF00072 Response regulator receiver domain LQ330_RS00625 PF00158 Sigma-54 interaction domain LQ330_RS00625 PF02954 Bacterial regulatory protein, Fis family LQ330_RS00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS00630 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS00630 PF00989 PAS fold LQ330_RS00640 PF12804 MobA-like NTP transferase domain LQ330_RS00640 PF14602 Hexapeptide repeat of succinyl-transferase LQ330_RS00640 PF00132 Bacterial transferase hexapeptide (six repeats) LQ330_RS00650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LQ330_RS00650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LQ330_RS00655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ330_RS00655 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQ330_RS00660 PF00231 ATP synthase LQ330_RS00665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ330_RS00665 PF00306 ATP synthase alpha/beta chain, C terminal domain LQ330_RS00665 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQ330_RS00670 PF00213 ATP synthase delta (OSCP) subunit LQ330_RS00675 PF00430 ATP synthase B/B' CF(0) LQ330_RS00680 PF00137 ATP synthase subunit C LQ330_RS00685 PF00119 ATP synthase A chain LQ330_RS00700 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS00700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ330_RS00705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQ330_RS00705 PF00364 Biotin-requiring enzyme LQ330_RS00705 PF02817 e3 binding domain LQ330_RS00720 PF01266 FAD dependent oxidoreductase LQ330_RS00720 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQ330_RS00725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQ330_RS00725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQ330_RS00730 PF03180 NLPA lipoprotein LQ330_RS00750 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LQ330_RS00750 PF03900 Porphobilinogen deaminase, C-terminal domain LQ330_RS00755 PF00072 Response regulator receiver domain LQ330_RS00755 PF04397 LytTr DNA-binding domain LQ330_RS00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS00760 PF06580 Histidine kinase LQ330_RS00765 PF02230 Phospholipase/Carboxylesterase LQ330_RS00770 PF13632 Glycosyl transferase family group 2 LQ330_RS00775 PF00593 TonB dependent receptor LQ330_RS00775 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS00785 PF10947 Protein of unknown function (DUF2628) LQ330_RS00825 PF07690 Major Facilitator Superfamily LQ330_RS00845 PF03641 Possible lysine decarboxylase LQ330_RS00850 PF00082 Subtilase family LQ330_RS00850 PF12951 Passenger-associated-transport-repeat LQ330_RS00850 PF03797 Autotransporter beta-domain LQ330_RS00860 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS00875 PF07681 DoxX LQ330_RS00880 PF00561 alpha/beta hydrolase fold LQ330_RS00890 PF02469 Fasciclin domain LQ330_RS00905 PF04545 Sigma-70, region 4 LQ330_RS00905 PF04539 Sigma-70 region 3 LQ330_RS00905 PF04542 Sigma-70 region 2 LQ330_RS00905 PF00140 Sigma-70 factor, region 1.2 LQ330_RS00905 PF03979 Sigma-70 factor, region 1.1 LQ330_RS00905 PF04546 Sigma-70, non-essential region LQ330_RS00910 PF02580 D-Tyr-tRNA(Tyr) deacylase LQ330_RS00920 PF00925 GTP cyclohydrolase II LQ330_RS00940 PF00535 Glycosyl transferase family 2 LQ330_RS00955 PF01189 16S rRNA methyltransferase RsmB/F LQ330_RS00955 PF01029 NusB family LQ330_RS00960 PF02911 Formyl transferase, C-terminal domain LQ330_RS00960 PF00551 Formyl transferase LQ330_RS00965 PF01327 Polypeptide deformylase LQ330_RS00975 PF02481 DNA recombination-mediator protein A LQ330_RS00975 PF17782 DprA winged helix domain LQ330_RS00980 PF04361 Protein of unknown function (DUF494) LQ330_RS00985 PF00114 Pilin (bacterial filament) LQ330_RS00985 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS00990 PF06271 RDD family LQ330_RS00995 PF01751 Toprim domain LQ330_RS00995 PF13368 Topoisomerase C-terminal repeat LQ330_RS00995 PF01131 DNA topoisomerase LQ330_RS01000 PF01300 Telomere recombination LQ330_RS01025 PF01343 Peptidase family S49 LQ330_RS01030 PF01554 MatE LQ330_RS01045 PF00270 DEAD/DEAH box helicase LQ330_RS01045 PF00271 Helicase conserved C-terminal domain LQ330_RS01045 PF17764 3′ DNA-binding domain (3′BD) LQ330_RS01045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LQ330_RS01045 PF18074 Primosomal protein N C-terminal domain LQ330_RS01050 PF13417 Glutathione S-transferase, N-terminal domain LQ330_RS01050 PF00043 Glutathione S-transferase, C-terminal domain LQ330_RS01060 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS01075 PF01541 GIY-YIG catalytic domain LQ330_RS01080 PF03458 UPF0126 domain LQ330_RS01085 PF00793 DAHP synthetase I family LQ330_RS01100 PF01047 MarR family LQ330_RS01105 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS01105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS01105 PF00672 HAMP domain LQ330_RS01110 PF00072 Response regulator receiver domain LQ330_RS01110 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS01130 PF00118 TCP-1/cpn60 chaperonin family LQ330_RS01135 PF00166 Chaperonin 10 Kd subunit LQ330_RS01140 PF04231 Endonuclease I LQ330_RS01145 PF03091 CutA1 divalent ion tolerance protein LQ330_RS01150 PF11412 Disulphide bond corrector protein DsbC LQ330_RS01150 PF02683 Cytochrome C biogenesis protein transmembrane region LQ330_RS01155 PF08534 Redoxin LQ330_RS01160 PF00175 Oxidoreductase NAD-binding domain LQ330_RS01160 PF00258 Flavodoxin LQ330_RS01160 PF00667 FAD binding domain LQ330_RS01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS01165 PF02203 Tar ligand binding domain homologue LQ330_RS01165 PF00672 HAMP domain LQ330_RS01170 PF00797 N-acetyltransferase LQ330_RS01185 PF03466 LysR substrate binding domain LQ330_RS01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS01195 PF00768 D-alanyl-D-alanine carboxypeptidase LQ330_RS01195 PF07943 Penicillin-binding protein 5, C-terminal domain LQ330_RS01205 PF02525 Flavodoxin-like fold LQ330_RS01225 PF01220 Dehydroquinase class II LQ330_RS01230 PF00364 Biotin-requiring enzyme LQ330_RS01235 PF02785 Biotin carboxylase C-terminal domain LQ330_RS01235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQ330_RS01235 PF00289 Biotin carboxylase, N-terminal domain LQ330_RS01260 PF02954 Bacterial regulatory protein, Fis family LQ330_RS01270 PF01553 Acyltransferase LQ330_RS01280 PF00782 Dual specificity phosphatase, catalytic domain LQ330_RS01285 PF12147 Putative methyltransferase LQ330_RS01285 PF12146 Serine aminopeptidase, S33 LQ330_RS01290 PF01066 CDP-alcohol phosphatidyltransferase LQ330_RS01295 PF02142 MGS-like domain LQ330_RS01295 PF01808 AICARFT/IMPCHase bienzyme LQ330_RS01300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LQ330_RS01300 PF02843 Phosphoribosylglycinamide synthetase, C domain LQ330_RS01300 PF02844 Phosphoribosylglycinamide synthetase, N domain LQ330_RS01305 PF04545 Sigma-70, region 4 LQ330_RS01305 PF04542 Sigma-70 region 2 LQ330_RS01305 PF00140 Sigma-70 factor, region 1.2 LQ330_RS01310 PF03167 Uracil DNA glycosylase superfamily LQ330_RS01315 PF00072 Response regulator receiver domain LQ330_RS01315 PF01339 CheB methylesterase LQ330_RS01320 PF18075 FtsX extracellular domain LQ330_RS01325 PF00005 ABC transporter LQ330_RS01330 PF00270 DEAD/DEAH box helicase LQ330_RS01330 PF00271 Helicase conserved C-terminal domain LQ330_RS01330 PF12300 ATP-dependent RNA helicase RhlB LQ330_RS01335 PF00085 Thioredoxin LQ330_RS01345 PF07694 5TMR of 5TMR-LYT LQ330_RS01345 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS01355 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LQ330_RS01380 PF03971 Monomeric isocitrate dehydrogenase LQ330_RS01390 PF01476 LysM domain LQ330_RS01390 PF04972 BON domain LQ330_RS01395 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LQ330_RS01395 PF14489 QueF-like protein LQ330_RS01400 PF13276 HTH-like domain LQ330_RS01400 PF13333 Integrase core domain LQ330_RS01400 PF00665 Integrase core domain LQ330_RS01405 PF01527 Transposase LQ330_RS01410 PF01546 Peptidase family M20/M25/M40 LQ330_RS01410 PF07687 Peptidase dimerisation domain LQ330_RS01415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS01420 PF00873 AcrB/AcrD/AcrF family LQ330_RS01425 PF00873 AcrB/AcrD/AcrF family LQ330_RS01430 PF12805 FUSC-like inner membrane protein yccS LQ330_RS01435 PF07690 Major Facilitator Superfamily LQ330_RS01460 PF00293 NUDIX domain LQ330_RS01460 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LQ330_RS01460 PF09297 NADH pyrophosphatase zinc ribbon domain LQ330_RS01465 PF01521 Iron-sulphur cluster biosynthesis LQ330_RS01485 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS01485 PF00072 Response regulator receiver domain LQ330_RS01485 PF00563 EAL domain LQ330_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS01490 PF01627 Hpt domain LQ330_RS01490 PF00072 Response regulator receiver domain LQ330_RS01490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQ330_RS01490 PF00672 HAMP domain LQ330_RS01490 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS01495 PF00210 Ferritin-like domain LQ330_RS01505 PF00293 NUDIX domain LQ330_RS01520 PF00380 Ribosomal protein S9/S16 LQ330_RS01525 PF00572 Ribosomal protein L13 LQ330_RS01530 PF03232 Ubiquinone biosynthesis protein COQ7 LQ330_RS01535 PF00893 Small Multidrug Resistance protein LQ330_RS01540 PF02675 S-adenosylmethionine decarboxylase LQ330_RS01545 PF00027 Cyclic nucleotide-binding domain LQ330_RS01545 PF00325 Bacterial regulatory proteins, crp family LQ330_RS01550 PF01925 Sulfite exporter TauE/SafE LQ330_RS01560 PF00218 Indole-3-glycerol phosphate synthase LQ330_RS01565 PF02885 Glycosyl transferase family, helical bundle domain LQ330_RS01565 PF00591 Glycosyl transferase family, a/b domain LQ330_RS01570 PF00117 Glutamine amidotransferase class-I LQ330_RS01580 PF04715 Anthranilate synthase component I, N terminal region LQ330_RS01580 PF00425 chorismate binding enzyme LQ330_RS01585 PF00781 Diacylglycerol kinase catalytic domain LQ330_RS01595 PF00834 Ribulose-phosphate 3 epimerase family LQ330_RS01600 PF00226 DnaJ domain LQ330_RS01600 PF05099 Tellurite resistance protein TerB LQ330_RS01605 PF01259 SAICAR synthetase LQ330_RS01615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQ330_RS01615 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LQ330_RS01615 PF00361 Proton-conducting membrane transporter LQ330_RS01615 PF13244 Domain of unknown function (DUF4040) LQ330_RS01620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQ330_RS01625 PF00361 Proton-conducting membrane transporter LQ330_RS01630 PF01899 Na+/H+ ion antiporter subunit LQ330_RS01635 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LQ330_RS01640 PF03334 Na+/H+ antiporter subunit LQ330_RS01645 PF01699 Sodium/calcium exchanger protein LQ330_RS01660 PF04209 homogentisate 1,2-dioxygenase LQ330_RS01665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ330_RS01670 PF01047 MarR family LQ330_RS01675 PF17761 DUF1016 N-terminal domain LQ330_RS01675 PF06250 YhcG PDDEXK nuclease domain LQ330_RS01690 PF00854 POT family LQ330_RS01695 PF03301 Tryptophan 2,3-dioxygenase LQ330_RS01700 PF00676 Dehydrogenase E1 component LQ330_RS01705 PF02779 Transketolase, pyrimidine binding domain LQ330_RS01705 PF02780 Transketolase, C-terminal domain LQ330_RS01715 PF02817 e3 binding domain LQ330_RS01715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQ330_RS01715 PF00364 Biotin-requiring enzyme LQ330_RS01725 PF13280 WYL domain LQ330_RS01725 PF08279 HTH domain LQ330_RS01730 PF13460 NAD(P)H-binding LQ330_RS01735 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS01740 PF05661 Protein of unknown function (DUF808) LQ330_RS01745 PF03109 ABC1 family LQ330_RS01750 PF00884 Sulfatase LQ330_RS01755 PF12795 Mechanosensitive ion channel porin domain LQ330_RS01755 PF00924 Mechanosensitive ion channel LQ330_RS01755 PF12794 Mechanosensitive ion channel inner membrane domain 1 LQ330_RS01770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQ330_RS01770 PF01266 FAD dependent oxidoreductase LQ330_RS01790 PF00072 Response regulator receiver domain LQ330_RS01790 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS01795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS01805 PF17810 Arginine decarboxylase helical bundle domain LQ330_RS01805 PF17944 Arginine decarboxylase C-terminal helical extension LQ330_RS01805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQ330_RS01810 PF17284 Spermidine synthase tetramerisation domain LQ330_RS01830 PF00543 Nitrogen regulatory protein P-II LQ330_RS01835 PF04380 Membrane fusogenic activity LQ330_RS01880 PF03527 RHS protein LQ330_RS01880 PF05593 RHS Repeat LQ330_RS01885 PF01078 Magnesium chelatase, subunit ChlI LQ330_RS01885 PF13335 Magnesium chelatase, subunit ChlI C-terminal LQ330_RS01910 PF06055 Exopolysaccharide synthesis, ExoD LQ330_RS01915 PF07995 Glucose / Sorbosone dehydrogenase LQ330_RS01925 PF01483 Proprotein convertase P-domain LQ330_RS01925 PF00082 Subtilase family LQ330_RS01935 PF00266 Aminotransferase class-V LQ330_RS01990 PF02667 Short chain fatty acid transporter LQ330_RS01995 PF01040 UbiA prenyltransferase family LQ330_RS02020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ330_RS02025 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS02025 PF00593 TonB dependent receptor LQ330_RS02035 PF01380 SIS domain LQ330_RS02040 PF00480 ROK family LQ330_RS02045 PF08013 Tagatose 6 phosphate kinase LQ330_RS02050 PF08220 DeoR-like helix-turn-helix domain LQ330_RS02050 PF00455 DeoR C terminal sensor domain LQ330_RS02055 PF01979 Amidohydrolase family LQ330_RS02060 PF00083 Sugar (and other) transporter LQ330_RS02075 PF00156 Phosphoribosyl transferase domain LQ330_RS02080 PF00654 Voltage gated chloride channel LQ330_RS02085 PF06968 Biotin and Thiamin Synthesis associated domain LQ330_RS02085 PF04055 Radical SAM superfamily LQ330_RS02090 PF00155 Aminotransferase class I and II LQ330_RS02095 PF12697 Alpha/beta hydrolase family LQ330_RS02105 PF13649 Methyltransferase domain LQ330_RS02115 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS02125 PF01134 Glucose inhibited division protein A LQ330_RS02125 PF13932 GidA associated domain LQ330_RS02130 PF02321 Outer membrane efflux protein LQ330_RS02130 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LQ330_RS02135 PF00873 AcrB/AcrD/AcrF family LQ330_RS02140 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS02140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS02145 PF00672 HAMP domain LQ330_RS02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS02145 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS02150 PF00072 Response regulator receiver domain LQ330_RS02150 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS02155 PF10127 RNA repair pathway DNA polymerase beta family LQ330_RS02160 PF00132 Bacterial transferase hexapeptide (six repeats) LQ330_RS02185 PF07726 ATPase family associated with various cellular activities (AAA) LQ330_RS02185 PF17863 AAA lid domain LQ330_RS02200 PF03738 Glutathionylspermidine synthase preATP-grasp LQ330_RS02210 PF00920 Dehydratase family LQ330_RS02215 PF13307 Helicase C-terminal domain LQ330_RS02215 PF06733 DEAD_2 LQ330_RS02225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LQ330_RS02225 PF08501 Shikimate dehydrogenase substrate binding domain LQ330_RS02225 PF01488 Shikimate / quinate 5-dehydrogenase LQ330_RS02240 PF00490 Delta-aminolevulinic acid dehydratase LQ330_RS02245 PF01062 Bestrophin, RFP-TM, chloride channel LQ330_RS02270 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LQ330_RS02270 PF00326 Prolyl oligopeptidase family LQ330_RS02275 PF00043 Glutathione S-transferase, C-terminal domain LQ330_RS02275 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS02280 PF03350 Uncharacterized protein family, UPF0114 LQ330_RS02295 PF02311 AraC-like ligand binding domain LQ330_RS02295 PF12833 Helix-turn-helix domain LQ330_RS02310 PF00005 ABC transporter LQ330_RS02315 PF00561 alpha/beta hydrolase fold LQ330_RS02320 PF17151 Periplasmic sensor domain LQ330_RS02320 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS02330 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LQ330_RS02330 PF18416 N-acetylglucosamine binding protein domain 2 LQ330_RS02335 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LQ330_RS02335 PF18416 N-acetylglucosamine binding protein domain 2 LQ330_RS02340 PF00175 Oxidoreductase NAD-binding domain LQ330_RS02340 PF00970 Oxidoreductase FAD-binding domain LQ330_RS02340 PF00111 2Fe-2S iron-sulfur cluster binding domain LQ330_RS02345 PF00005 ABC transporter LQ330_RS02350 PF01061 ABC-2 type transporter LQ330_RS02360 PF02558 Ketopantoate reductase PanE/ApbA LQ330_RS02360 PF08546 Ketopantoate reductase PanE/ApbA C terminal LQ330_RS02370 PF01026 TatD related DNase LQ330_RS02380 PF08482 ATP-dependent helicase C-terminal LQ330_RS02380 PF00270 DEAD/DEAH box helicase LQ330_RS02380 PF04408 Helicase associated domain (HA2) LQ330_RS02380 PF00271 Helicase conserved C-terminal domain LQ330_RS02390 PF00849 RNA pseudouridylate synthase LQ330_RS02405 PF00248 Aldo/keto reductase family LQ330_RS02420 PF01139 tRNA-splicing ligase RtcB LQ330_RS02435 PF00672 HAMP domain LQ330_RS02435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS02440 PF00248 Aldo/keto reductase family LQ330_RS02445 PF17149 Periplasmic sensor domain found in signal transduction proteins LQ330_RS02445 PF00672 HAMP domain LQ330_RS02445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS02445 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS02445 PF01627 Hpt domain LQ330_RS02445 PF00072 Response regulator receiver domain LQ330_RS02460 PF00561 alpha/beta hydrolase fold LQ330_RS02465 PF01906 Putative heavy-metal-binding LQ330_RS02470 PF13380 CoA binding domain LQ330_RS02470 PF13607 Succinyl-CoA ligase like flavodoxin domain LQ330_RS02470 PF00583 Acetyltransferase (GNAT) family LQ330_RS02475 PF01769 Divalent cation transporter LQ330_RS02475 PF03448 MgtE intracellular N domain LQ330_RS02475 PF00571 CBS domain LQ330_RS02480 PF02254 TrkA-N domain LQ330_RS02480 PF00999 Sodium/hydrogen exchanger family LQ330_RS02485 PF12796 Ankyrin repeats (3 copies) LQ330_RS02485 PF02661 Fic/DOC family LQ330_RS02490 PF05166 YcgL domain LQ330_RS02500 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ330_RS02500 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ330_RS02515 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ330_RS02515 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ330_RS02525 PF01494 FAD binding domain LQ330_RS02545 PF00221 Aromatic amino acid lyase LQ330_RS02555 PF00535 Glycosyl transferase family 2 LQ330_RS02570 PF00550 Phosphopantetheine attachment site LQ330_RS02575 PF00550 Phosphopantetheine attachment site LQ330_RS02590 PF02322 Cytochrome bd terminal oxidase subunit II LQ330_RS02595 PF01654 Cytochrome bd terminal oxidase subunit I LQ330_RS02605 PF08281 Sigma-70, region 4 LQ330_RS02605 PF04542 Sigma-70 region 2 LQ330_RS02625 PF13344 Haloacid dehalogenase-like hydrolase LQ330_RS02625 PF00293 NUDIX domain LQ330_RS02640 PF01218 Coproporphyrinogen III oxidase LQ330_RS02650 PF04239 Protein of unknown function (DUF421) LQ330_RS02655 PF01612 3'-5' exonuclease LQ330_RS02655 PF00476 DNA polymerase family A LQ330_RS02655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQ330_RS02655 PF01367 5'-3' exonuclease, C-terminal SAM fold LQ330_RS02665 PF00582 Universal stress protein family LQ330_RS02680 PF13361 UvrD-like helicase C-terminal domain LQ330_RS02680 PF00580 UvrD/REP helicase N-terminal domain LQ330_RS02695 PF13091 PLD-like domain LQ330_RS02695 PF13396 Phospholipase_D-nuclease N-terminal LQ330_RS02705 PF00471 Ribosomal protein L33 LQ330_RS02710 PF00830 Ribosomal L28 family LQ330_RS02715 PF03033 Glycosyltransferase family 28 N-terminal domain LQ330_RS02720 PF00929 Exonuclease LQ330_RS02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS02725 PF03466 LysR substrate binding domain LQ330_RS02730 PF01042 Endoribonuclease L-PSP LQ330_RS02740 PF02321 Outer membrane efflux protein LQ330_RS02745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS02750 PF00873 AcrB/AcrD/AcrF family LQ330_RS02765 PF00535 Glycosyl transferase family 2 LQ330_RS02770 PF01370 NAD dependent epimerase/dehydratase family LQ330_RS02780 PF02195 ParB-like nuclease domain LQ330_RS02780 PF17762 HTH domain found in ParB protein LQ330_RS02785 PF13614 AAA domain LQ330_RS02790 PF02527 rRNA small subunit methyltransferase G LQ330_RS02795 PF01648 4'-phosphopantetheinyl transferase superfamily LQ330_RS02800 PF04226 Transglycosylase associated protein LQ330_RS02810 PF00171 Aldehyde dehydrogenase family LQ330_RS02815 PF00083 Sugar (and other) transporter LQ330_RS02815 PF08946 Osmosensory transporter coiled coil LQ330_RS02825 PF16177 Acetyl-coenzyme A synthetase N-terminus LQ330_RS02825 PF00501 AMP-binding enzyme LQ330_RS02825 PF13193 AMP-binding enzyme C-terminal domain LQ330_RS02830 PF00072 Response regulator receiver domain LQ330_RS02830 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS02835 PF02659 Putative manganese efflux pump LQ330_RS02840 PF00072 Response regulator receiver domain LQ330_RS02840 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ330_RS02840 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS02845 PF10459 Peptidase S46 LQ330_RS02850 PF04357 TamB, inner membrane protein subunit of TAM complex LQ330_RS02855 PF07244 Surface antigen variable number repeat LQ330_RS02855 PF01103 Surface antigen LQ330_RS02855 PF17243 POTRA domain TamA domain 1 LQ330_RS02860 PF02092 Glycyl-tRNA synthetase beta subunit LQ330_RS02860 PF05746 DALR anticodon binding domain LQ330_RS02865 PF02091 Glycyl-tRNA synthetase alpha subunit LQ330_RS02870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ330_RS02870 PF00437 Type II/IV secretion system protein LQ330_RS02875 PF00958 GMP synthase C terminal domain LQ330_RS02875 PF00117 Glutamine amidotransferase class-I LQ330_RS02885 PF00902 Sec-independent protein translocase protein (TatC) LQ330_RS02890 PF02416 mttA/Hcf106 family LQ330_RS02895 PF02416 mttA/Hcf106 family LQ330_RS02905 PF00762 Ferrochelatase LQ330_RS02910 PF12697 Alpha/beta hydrolase family LQ330_RS02915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS02915 PF00672 HAMP domain LQ330_RS02915 PF02203 Tar ligand binding domain homologue LQ330_RS02970 PF03594 Benzoate membrane transport protein LQ330_RS02985 PF01263 Aldose 1-epimerase LQ330_RS02990 PF10017 Histidine-specific methyltransferase, SAM-dependent LQ330_RS02995 PF03781 Sulfatase-modifying factor enzyme 1 LQ330_RS02995 PF12867 DinB superfamily LQ330_RS03000 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS03005 PF02810 SEC-C motif LQ330_RS03010 PF01925 Sulfite exporter TauE/SafE LQ330_RS03030 PF01227 GTP cyclohydrolase I LQ330_RS03040 PF07869 Protein of unknown function (DUF1656) LQ330_RS03045 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS03045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS03050 PF02321 Outer membrane efflux protein LQ330_RS03055 PF04632 Fusaric acid resistance protein family LQ330_RS03065 PF13538 UvrD-like helicase C-terminal domain LQ330_RS03070 PF13361 UvrD-like helicase C-terminal domain LQ330_RS03070 PF00580 UvrD/REP helicase N-terminal domain LQ330_RS03070 PF12705 PD-(D/E)XK nuclease superfamily LQ330_RS03075 PF17946 RecC C-terminal domain LQ330_RS03080 PF00005 ABC transporter LQ330_RS03085 PF02405 Permease MlaE LQ330_RS03090 PF02470 MlaD protein LQ330_RS03105 PF04333 MlaA lipoprotein LQ330_RS03110 PF00255 Glutathione peroxidase LQ330_RS03120 PF02646 RmuC family LQ330_RS03125 PF00043 Glutathione S-transferase, C-terminal domain LQ330_RS03125 PF13417 Glutathione S-transferase, N-terminal domain LQ330_RS03130 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS03130 PF00107 Zinc-binding dehydrogenase LQ330_RS03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS03135 PF03466 LysR substrate binding domain LQ330_RS03140 PF01810 LysE type translocator LQ330_RS03145 PF03466 LysR substrate binding domain LQ330_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS03150 PF00248 Aldo/keto reductase family LQ330_RS03160 PF13520 Amino acid permease LQ330_RS03170 PF17785 PUA-like domain LQ330_RS03170 PF10672 S-adenosylmethionine-dependent methyltransferase LQ330_RS03175 PF03741 Integral membrane protein TerC family LQ330_RS03180 PF01694 Rhomboid family LQ330_RS03185 PF03009 Glycerophosphoryl diester phosphodiesterase family LQ330_RS03190 PF01926 50S ribosome-binding GTPase LQ330_RS03190 PF12631 MnmE helical domain LQ330_RS03190 PF10396 GTP-binding protein TrmE N-terminus LQ330_RS03200 PF02096 60Kd inner membrane protein LQ330_RS03200 PF14849 YidC periplasmic domain LQ330_RS03205 PF00825 Ribonuclease P LQ330_RS03210 PF00468 Ribosomal protein L34 LQ330_RS03215 PF00308 Bacterial dnaA protein LQ330_RS03215 PF08299 Bacterial dnaA protein helix-turn-helix LQ330_RS03215 PF11638 DnaA N-terminal domain LQ330_RS03220 PF00712 DNA polymerase III beta subunit, N-terminal domain LQ330_RS03220 PF02767 DNA polymerase III beta subunit, central domain LQ330_RS03220 PF02768 DNA polymerase III beta subunit, C-terminal domain LQ330_RS03225 PF02463 RecF/RecN/SMC N terminal domain LQ330_RS03230 PF01751 Toprim domain LQ330_RS03230 PF00204 DNA gyrase B LQ330_RS03230 PF00986 DNA gyrase B subunit, carboxyl terminus LQ330_RS03230 PF18053 DNA gyrase B subunit insert domain LQ330_RS03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS03235 PF02517 CPBP intramembrane metalloprotease LQ330_RS03240 PF01435 Peptidase family M48 LQ330_RS03250 PF03544 Gram-negative bacterial TonB protein C-terminal LQ330_RS03255 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS03260 PF02472 Biopolymer transport protein ExbD/TolR LQ330_RS03265 PF02472 Biopolymer transport protein ExbD/TolR LQ330_RS03270 PF13396 Phospholipase_D-nuclease N-terminal LQ330_RS03270 PF13091 PLD-like domain LQ330_RS03280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LQ330_RS03285 PF04055 Radical SAM superfamily LQ330_RS03315 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LQ330_RS03320 PF00155 Aminotransferase class I and II LQ330_RS03325 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS03325 PF00593 TonB dependent receptor LQ330_RS03340 PF02735 Ku70/Ku80 beta-barrel domain LQ330_RS03345 PF13298 DNA polymerase Ligase (LigD) LQ330_RS03345 PF04679 ATP dependent DNA ligase C terminal region LQ330_RS03345 PF01068 ATP dependent DNA ligase domain LQ330_RS03355 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS03355 PF00107 Zinc-binding dehydrogenase LQ330_RS03360 PF01081 KDPG and KHG aldolase LQ330_RS03365 PF00294 pfkB family carbohydrate kinase LQ330_RS03385 PF00135 Carboxylesterase family LQ330_RS03400 PF03480 Bacterial extracellular solute-binding protein, family 7 LQ330_RS03410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQ330_RS03415 PF04616 Glycosyl hydrolases family 43 LQ330_RS03415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LQ330_RS03420 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS03425 PF04962 KduI/IolB family LQ330_RS03435 PF00657 GDSL-like Lipase/Acylhydrolase LQ330_RS03445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LQ330_RS03450 PF01037 Lrp/AsnC ligand binding domain LQ330_RS03455 PF01734 Patatin-like phospholipase LQ330_RS03465 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS03465 PF00593 TonB dependent receptor LQ330_RS03480 PF01569 PAP2 superfamily LQ330_RS03495 PF00005 ABC transporter LQ330_RS03510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQ330_RS03510 PF06827 Zinc finger found in FPG and IleRS LQ330_RS03510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQ330_RS03515 PF04349 Periplasmic glucan biosynthesis protein, MdoG LQ330_RS03520 PF00265 Thymidine kinase LQ330_RS03525 PF13361 UvrD-like helicase C-terminal domain LQ330_RS03525 PF00580 UvrD/REP helicase N-terminal domain LQ330_RS03535 PF04337 Protein of unknown function, DUF480 LQ330_RS03540 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LQ330_RS03545 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LQ330_RS03550 PF00089 Trypsin LQ330_RS03560 PF01553 Acyltransferase LQ330_RS03570 PF01171 PP-loop family LQ330_RS03575 PF04381 Putative exonuclease, RdgC LQ330_RS03585 PF02142 MGS-like domain LQ330_RS03590 PF00989 PAS fold LQ330_RS03590 PF00072 Response regulator receiver domain LQ330_RS03590 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQ330_RS03590 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS03590 PF01627 Hpt domain LQ330_RS03595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS03595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQ330_RS03600 PF01493 GXGXG motif LQ330_RS03600 PF01645 Conserved region in glutamate synthase LQ330_RS03600 PF04898 Glutamate synthase central domain LQ330_RS03600 PF00310 Glutamine amidotransferases class-II LQ330_RS03630 PF00144 Beta-lactamase LQ330_RS03655 PF09369 Domain of unknown function (DUF1998) LQ330_RS03655 PF00271 Helicase conserved C-terminal domain LQ330_RS03655 PF00270 DEAD/DEAH box helicase LQ330_RS03685 PF01882 Protein of unknown function DUF58 LQ330_RS03690 PF17863 AAA lid domain LQ330_RS03690 PF07726 ATPase family associated with various cellular activities (AAA) LQ330_RS03710 PF01523 Putative modulator of DNA gyrase LQ330_RS03730 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS03730 PF17862 AAA+ lid domain LQ330_RS03730 PF01434 Peptidase family M41 LQ330_RS03750 PF13091 PLD-like domain LQ330_RS03755 PF03061 Thioesterase superfamily LQ330_RS03760 PF01553 Acyltransferase LQ330_RS03785 PF02673 Bacitracin resistance protein BacA LQ330_RS03790 PF03951 Glutamine synthetase, beta-Grasp domain LQ330_RS03790 PF00120 Glutamine synthetase, catalytic domain LQ330_RS03795 PF00543 Nitrogen regulatory protein P-II LQ330_RS03800 PF00909 Ammonium Transporter Family LQ330_RS03825 PF06725 3D domain LQ330_RS03825 PF03562 MltA specific insert domain LQ330_RS03835 PF01381 Helix-turn-helix LQ330_RS03850 PF00664 ABC transporter transmembrane region LQ330_RS03850 PF03412 Peptidase C39 family LQ330_RS03850 PF00005 ABC transporter LQ330_RS03860 PF04055 Radical SAM superfamily LQ330_RS03860 PF13186 Iron-sulfur cluster-binding domain LQ330_RS03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS03880 PF00989 PAS fold LQ330_RS03880 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS03885 PF00072 Response regulator receiver domain LQ330_RS03885 PF00158 Sigma-54 interaction domain LQ330_RS03885 PF02954 Bacterial regulatory protein, Fis family LQ330_RS03890 PF00080 Copper/zinc superoxide dismutase (SODC) LQ330_RS03895 PF00080 Copper/zinc superoxide dismutase (SODC) LQ330_RS03905 PF02803 Thiolase, C-terminal domain LQ330_RS03905 PF00108 Thiolase, N-terminal domain LQ330_RS03940 PF02556 Preprotein translocase subunit SecB LQ330_RS03945 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LQ330_RS03945 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LQ330_RS04020 PF01758 Sodium Bile acid symporter family LQ330_RS04055 PF12833 Helix-turn-helix domain LQ330_RS04070 PF04261 Dyp-type peroxidase family LQ330_RS04100 PF00072 Response regulator receiver domain LQ330_RS04100 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS04105 PF00072 Response regulator receiver domain LQ330_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS04105 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS04105 PF01627 Hpt domain LQ330_RS04105 PF00989 PAS fold LQ330_RS04105 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQ330_RS04120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ330_RS04120 PF02770 Acyl-CoA dehydrogenase, middle domain LQ330_RS04120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS04125 PF00588 SpoU rRNA Methylase family LQ330_RS04135 PF05193 Peptidase M16 inactive domain LQ330_RS04135 PF00675 Insulinase (Peptidase family M16) LQ330_RS04145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQ330_RS04145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQ330_RS04150 PF00561 alpha/beta hydrolase fold LQ330_RS04160 PF00501 AMP-binding enzyme LQ330_RS04165 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LQ330_RS04175 PF07478 D-ala D-ala ligase C-terminus LQ330_RS04175 PF01820 D-ala D-ala ligase N-terminus LQ330_RS04185 PF03109 ABC1 family LQ330_RS04190 PF01596 O-methyltransferase LQ330_RS04195 PF04287 tRNA pseudouridine synthase C LQ330_RS04195 PF00849 RNA pseudouridylate synthase LQ330_RS04210 PF00472 RF-1 domain LQ330_RS04220 PF01432 Peptidase family M3 LQ330_RS04235 PF10502 Signal peptidase, peptidase S26 LQ330_RS04240 PF07690 Major Facilitator Superfamily LQ330_RS04245 PF03466 LysR substrate binding domain LQ330_RS04245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS04250 PF03466 LysR substrate binding domain LQ330_RS04255 PF01274 Malate synthase LQ330_RS04260 PF00463 Isocitrate lyase family LQ330_RS04265 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS04285 PF02785 Biotin carboxylase C-terminal domain LQ330_RS04285 PF00289 Biotin carboxylase, N-terminal domain LQ330_RS04285 PF00364 Biotin-requiring enzyme LQ330_RS04285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQ330_RS04290 PF01039 Carboxyl transferase domain LQ330_RS04295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS04295 PF02770 Acyl-CoA dehydrogenase, middle domain LQ330_RS04295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ330_RS04325 PF03969 AFG1-like ATPase LQ330_RS04330 PF02867 Ribonucleotide reductase, barrel domain LQ330_RS04330 PF03477 ATP cone domain LQ330_RS04330 PF00317 Ribonucleotide reductase, all-alpha domain LQ330_RS04335 PF00268 Ribonucleotide reductase, small chain LQ330_RS04340 PF01810 LysE type translocator LQ330_RS04345 PF03061 Thioesterase superfamily LQ330_RS04355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS04360 PF03466 LysR substrate binding domain LQ330_RS04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS04365 PF00551 Formyl transferase LQ330_RS04375 PF00857 Isochorismatase family LQ330_RS04380 PF02677 Epoxyqueuosine reductase QueH LQ330_RS04390 PF01467 Cytidylyltransferase-like LQ330_RS04390 PF00293 NUDIX domain LQ330_RS04395 PF01734 Patatin-like phospholipase LQ330_RS04405 PF09856 Predicted transcriptional regulator (DUF2083) LQ330_RS04405 PF01381 Helix-turn-helix LQ330_RS04405 PF06114 IrrE N-terminal-like domain LQ330_RS04410 PF00171 Aldehyde dehydrogenase family LQ330_RS04415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS04415 PF02770 Acyl-CoA dehydrogenase, middle domain LQ330_RS04415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ330_RS04420 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS04425 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS04430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQ330_RS04430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQ330_RS04435 PF02566 OsmC-like protein LQ330_RS04455 PF01207 Dihydrouridine synthase (Dus) LQ330_RS04465 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS04465 PF00072 Response regulator receiver domain LQ330_RS04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS04475 PF06167 Glucose-regulated metallo-peptidase M90 LQ330_RS04485 PF03099 Biotin/lipoate A/B protein ligase family LQ330_RS04485 PF08279 HTH domain LQ330_RS04485 PF02237 Biotin protein ligase C terminal domain LQ330_RS04490 PF03309 Type III pantothenate kinase LQ330_RS04635 PF07484 Phage Tail Collar Domain LQ330_RS04665 PF00182 Chitinase class I LQ330_RS04720 PF01555 DNA methylase LQ330_RS04725 PF10549 ORF11CD3 domain LQ330_RS04725 PF09669 Phage regulatory protein Rha (Phage_pRha) LQ330_RS04755 PF00491 Arginase family LQ330_RS04765 PF05532 CsbD-like LQ330_RS04775 PF00579 tRNA synthetases class I (W and Y) LQ330_RS04800 PF00083 Sugar (and other) transporter LQ330_RS04805 PF00892 EamA-like transporter family LQ330_RS04810 PF00892 EamA-like transporter family LQ330_RS04815 PF00005 ABC transporter LQ330_RS04815 PF02687 FtsX-like permease family LQ330_RS04815 PF12704 MacB-like periplasmic core domain LQ330_RS04825 PF00005 ABC transporter LQ330_RS04830 PF13533 Biotin-lipoyl like LQ330_RS04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS04835 PF07730 Histidine kinase LQ330_RS04840 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS04840 PF00072 Response regulator receiver domain LQ330_RS04855 PF02789 Cytosol aminopeptidase family, N-terminal domain LQ330_RS04855 PF00883 Cytosol aminopeptidase family, catalytic domain LQ330_RS04865 PF01594 AI-2E family transporter LQ330_RS04885 PF00595 PDZ domain LQ330_RS04885 PF13180 PDZ domain LQ330_RS04900 PF07237 Protein of unknown function (DUF1428) LQ330_RS04925 PF07690 Major Facilitator Superfamily LQ330_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS04930 PF03466 LysR substrate binding domain LQ330_RS04935 PF07308 Protein of unknown function (DUF1456) LQ330_RS04940 PF00106 short chain dehydrogenase LQ330_RS04950 PF03485 Arginyl tRNA synthetase N terminal domain LQ330_RS04950 PF05746 DALR anticodon binding domain LQ330_RS04950 PF00750 tRNA synthetases class I (R) LQ330_RS05000 PF00580 UvrD/REP helicase N-terminal domain LQ330_RS05000 PF13361 UvrD-like helicase C-terminal domain LQ330_RS05015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LQ330_RS05035 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS05035 PF00072 Response regulator receiver domain LQ330_RS05040 PF04127 DNA / pantothenate metabolism flavoprotein LQ330_RS05040 PF02441 Flavoprotein LQ330_RS05045 PF00692 dUTPase LQ330_RS05050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQ330_RS05050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQ330_RS05050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQ330_RS05050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQ330_RS05055 PF00072 Response regulator receiver domain LQ330_RS05055 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS05060 PF13493 Domain of unknown function (DUF4118) LQ330_RS05060 PF13492 GAF domain LQ330_RS05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS05060 PF02702 Osmosensitive K+ channel His kinase sensor domain LQ330_RS05060 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS05065 PF02669 K+-transporting ATPase, c chain LQ330_RS05075 PF03814 Potassium-transporting ATPase A subunit LQ330_RS05090 PF00156 Phosphoribosyl transferase domain LQ330_RS05095 PF03372 Endonuclease/Exonuclease/phosphatase family LQ330_RS05100 PF07690 Major Facilitator Superfamily LQ330_RS05110 PF03702 Anhydro-N-acetylmuramic acid kinase LQ330_RS05115 PF04225 Opacity-associated protein A LysM-like domain LQ330_RS05115 PF01551 Peptidase family M23 LQ330_RS05120 PF00579 tRNA synthetases class I (W and Y) LQ330_RS05175 PF04389 Peptidase family M28 LQ330_RS05185 PF01551 Peptidase family M23 LQ330_RS05190 PF03572 Peptidase family S41 LQ330_RS05190 PF13180 PDZ domain LQ330_RS05205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LQ330_RS05215 PF04973 Nicotinamide mononucleotide transporter LQ330_RS05225 PF01619 Proline dehydrogenase LQ330_RS05225 PF14850 DNA-binding domain of Proline dehydrogenase LQ330_RS05225 PF00171 Aldehyde dehydrogenase family LQ330_RS05225 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LQ330_RS05235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQ330_RS05235 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LQ330_RS05240 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQ330_RS05250 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LQ330_RS05255 PF00510 Cytochrome c oxidase subunit III LQ330_RS05280 PF01040 UbiA prenyltransferase family LQ330_RS05285 PF13593 SBF-like CPA transporter family (DUF4137) LQ330_RS05295 PF01807 CHC2 zinc finger LQ330_RS05295 PF08278 DNA primase DnaG DnaB-binding LQ330_RS05295 PF10410 DnaB-helicase binding domain of primase LQ330_RS05295 PF08275 DNA primase catalytic core, N-terminal domain LQ330_RS05300 PF03631 Virulence factor BrkB LQ330_RS05310 PF01165 Ribosomal protein S21 LQ330_RS05315 PF00814 Glycoprotease family LQ330_RS05320 PF02152 Dihydroneopterin aldolase LQ330_RS05325 PF00924 Mechanosensitive ion channel LQ330_RS05330 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ330_RS05330 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ330_RS05330 PF14310 Fibronectin type III-like domain LQ330_RS05340 PF07995 Glucose / Sorbosone dehydrogenase LQ330_RS05345 PF05360 yiaA/B two helix domain LQ330_RS05355 PF13520 Amino acid permease LQ330_RS05365 PF01418 Helix-turn-helix domain, rpiR family LQ330_RS05365 PF01380 SIS domain LQ330_RS05370 PF13378 Enolase C-terminal domain-like LQ330_RS05370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQ330_RS05385 PF00593 TonB dependent receptor LQ330_RS05395 PF01427 D-ala-D-ala dipeptidase LQ330_RS05420 PF07063 Domain of unknown function (DUF1338) LQ330_RS05425 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LQ330_RS05425 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LQ330_RS05430 PF03710 Glutamate-ammonia ligase adenylyltransferase LQ330_RS05430 PF08335 GlnD PII-uridylyltransferase LQ330_RS05435 PF02592 Putative vitamin uptake transporter LQ330_RS05460 PF00881 Nitroreductase family LQ330_RS05465 PF04264 YceI-like domain LQ330_RS05480 PF04954 Siderophore-interacting protein LQ330_RS05480 PF08021 Siderophore-interacting FAD-binding domain LQ330_RS05485 PF03551 Transcriptional regulator PadR-like family LQ330_RS05490 PF00456 Transketolase, thiamine diphosphate binding domain LQ330_RS05490 PF17831 Pyruvate dehydrogenase E1 component middle domain LQ330_RS05495 PF03793 PASTA domain LQ330_RS05495 PF00069 Protein kinase domain LQ330_RS05570 PF00561 alpha/beta hydrolase fold LQ330_RS05620 PF16916 Dimerisation domain of Zinc Transporter LQ330_RS05620 PF01545 Cation efflux family LQ330_RS05625 PF02583 Metal-sensitive transcriptional repressor LQ330_RS05635 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQ330_RS05635 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQ330_RS05640 PF12848 ABC transporter LQ330_RS05640 PF00005 ABC transporter LQ330_RS05645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS05645 PF03466 LysR substrate binding domain LQ330_RS05650 PF00144 Beta-lactamase LQ330_RS05655 PF07690 Major Facilitator Superfamily LQ330_RS05660 PF00563 EAL domain LQ330_RS05660 PF12792 CSS motif domain associated with EAL LQ330_RS05665 PF00324 Amino acid permease LQ330_RS05670 PF01464 Transglycosylase SLT domain LQ330_RS05690 PF01527 Transposase LQ330_RS05695 PF13276 HTH-like domain LQ330_RS05695 PF00665 Integrase core domain LQ330_RS05695 PF13333 Integrase core domain LQ330_RS05705 PF06983 3-demethylubiquinone-9 3-methyltransferase LQ330_RS05715 PF07237 Protein of unknown function (DUF1428) LQ330_RS05720 PF04542 Sigma-70 region 2 LQ330_RS05720 PF08281 Sigma-70, region 4 LQ330_RS05750 PF07694 5TMR of 5TMR-LYT LQ330_RS05750 PF06580 Histidine kinase LQ330_RS05755 PF00072 Response regulator receiver domain LQ330_RS05755 PF04397 LytTr DNA-binding domain LQ330_RS05775 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS05785 PF07690 Major Facilitator Superfamily LQ330_RS05790 PF01431 Peptidase family M13 LQ330_RS05790 PF05649 Peptidase family M13 LQ330_RS05795 PF08447 PAS fold LQ330_RS05795 PF08448 PAS fold LQ330_RS05795 PF00563 EAL domain LQ330_RS05795 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS05800 PF03466 LysR substrate binding domain LQ330_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS05810 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LQ330_RS05815 PF00999 Sodium/hydrogen exchanger family LQ330_RS05840 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQ330_RS05840 PF00691 OmpA family LQ330_RS05845 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS05850 PF01641 SelR domain LQ330_RS05865 PF01037 Lrp/AsnC ligand binding domain LQ330_RS05870 PF01266 FAD dependent oxidoreductase LQ330_RS05875 PF01168 Alanine racemase, N-terminal domain LQ330_RS05875 PF00842 Alanine racemase, C-terminal domain LQ330_RS05885 PF00989 PAS fold LQ330_RS05885 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS05885 PF18698 Histidine kinase sensor domain LQ330_RS05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS05885 PF00672 HAMP domain LQ330_RS05900 PF05175 Methyltransferase small domain LQ330_RS05900 PF08468 Methyltransferase small domain N-terminal LQ330_RS05905 PF00849 RNA pseudouridylate synthase LQ330_RS05905 PF01479 S4 domain LQ330_RS05910 PF13419 Haloacid dehalogenase-like hydrolase LQ330_RS05915 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ330_RS05915 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ330_RS05920 PF07977 FabA-like domain LQ330_RS05925 PF11798 IMS family HHH motif LQ330_RS05925 PF11799 impB/mucB/samB family C-terminal domain LQ330_RS05925 PF00817 impB/mucB/samB family LQ330_RS05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS05940 PF03466 LysR substrate binding domain LQ330_RS05945 PF08241 Methyltransferase domain LQ330_RS05950 PF13419 Haloacid dehalogenase-like hydrolase LQ330_RS05955 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS05955 PF00593 TonB dependent receptor LQ330_RS05975 PF13185 GAF domain LQ330_RS05985 PF00155 Aminotransferase class I and II LQ330_RS05985 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS05990 PF01625 Peptide methionine sulfoxide reductase LQ330_RS05995 PF17991 Thioredoxin like C-terminal domain LQ330_RS05995 PF02683 Cytochrome C biogenesis protein transmembrane region LQ330_RS05995 PF00578 AhpC/TSA family LQ330_RS06000 PF01641 SelR domain LQ330_RS06005 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS06005 PF00072 Response regulator receiver domain LQ330_RS06010 PF00672 HAMP domain LQ330_RS06010 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS06010 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB LQ330_RS06010 PF08448 PAS fold LQ330_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS06015 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS06015 PF00672 HAMP domain LQ330_RS06020 PF00072 Response regulator receiver domain LQ330_RS06020 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS06025 PF00733 Asparagine synthase LQ330_RS06025 PF13537 Glutamine amidotransferase domain LQ330_RS06035 PF01242 6-pyruvoyl tetrahydropterin synthase LQ330_RS06040 PF00593 TonB dependent receptor LQ330_RS06040 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS06050 PF00271 Helicase conserved C-terminal domain LQ330_RS06050 PF00270 DEAD/DEAH box helicase LQ330_RS06060 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS06060 PF14497 Glutathione S-transferase, C-terminal domain LQ330_RS06075 PF00437 Type II/IV secretion system protein LQ330_RS06095 PF00571 CBS domain LQ330_RS06095 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS06100 PF01053 Cys/Met metabolism PLP-dependent enzyme LQ330_RS06105 PF01061 ABC-2 type transporter LQ330_RS06110 PF00005 ABC transporter LQ330_RS06125 PF00535 Glycosyl transferase family 2 LQ330_RS06145 PF16363 GDP-mannose 4,6 dehydratase LQ330_RS06155 PF00535 Glycosyl transferase family 2 LQ330_RS06165 PF01012 Electron transfer flavoprotein domain LQ330_RS06165 PF00766 Electron transfer flavoprotein FAD-binding domain LQ330_RS06170 PF01012 Electron transfer flavoprotein domain LQ330_RS06175 PF16363 GDP-mannose 4,6 dehydratase LQ330_RS06180 PF00483 Nucleotidyl transferase LQ330_RS06185 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LQ330_RS06190 PF04321 RmlD substrate binding domain LQ330_RS06195 PF01380 SIS domain LQ330_RS06200 PF01050 Mannose-6-phosphate isomerase LQ330_RS06200 PF00483 Nucleotidyl transferase LQ330_RS06205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQ330_RS06205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQ330_RS06205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQ330_RS06205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQ330_RS06215 PF01593 Flavin containing amine oxidoreductase LQ330_RS06225 PF00106 short chain dehydrogenase LQ330_RS06230 PF04030 D-arabinono-1,4-lactone oxidase LQ330_RS06230 PF01565 FAD binding domain LQ330_RS06235 PF01040 UbiA prenyltransferase family LQ330_RS06240 PF01144 Coenzyme A transferase LQ330_RS06245 PF01144 Coenzyme A transferase LQ330_RS06250 PF05045 Rhamnan synthesis protein F LQ330_RS06250 PF14307 Glycosyltransferase WbsX LQ330_RS06270 PF00005 ABC transporter LQ330_RS06275 PF02405 Permease MlaE LQ330_RS06285 PF00816 H-NS histone family LQ330_RS06290 PF03129 Anticodon binding domain LQ330_RS06290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQ330_RS06290 PF04073 Aminoacyl-tRNA editing domain LQ330_RS06300 PF01066 CDP-alcohol phosphatidyltransferase LQ330_RS06310 PF00583 Acetyltransferase (GNAT) family LQ330_RS06320 PF08264 Anticodon-binding domain of tRNA LQ330_RS06320 PF00133 tRNA synthetases class I (I, L, M and V) LQ330_RS06320 PF10458 Valyl tRNA synthetase tRNA binding arm LQ330_RS06330 PF02789 Cytosol aminopeptidase family, N-terminal domain LQ330_RS06330 PF00883 Cytosol aminopeptidase family, catalytic domain LQ330_RS06340 PF03739 Lipopolysaccharide export system permease LptF/LptG LQ330_RS06350 PF02899 Phage integrase, N-terminal SAM-like domain LQ330_RS06350 PF00589 Phage integrase family LQ330_RS06355 PF10411 Disulfide bond isomerase protein N-terminus LQ330_RS06355 PF13098 Thioredoxin-like domain LQ330_RS06360 PF00704 Glycosyl hydrolases family 18 LQ330_RS06360 PF00041 Fibronectin type III domain LQ330_RS06360 PF00553 Cellulose binding domain LQ330_RS06365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LQ330_RS06365 PF02769 AIR synthase related protein, C-terminal domain LQ330_RS06365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LQ330_RS06370 PF13018 Extended Signal Peptide of Type V secretion system LQ330_RS06370 PF05658 Head domain of trimeric autotransporter adhesin LQ330_RS06370 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ330_RS06370 PF03895 YadA-like membrane anchor domain LQ330_RS06375 PF00082 Subtilase family LQ330_RS06375 PF04151 Bacterial pre-peptidase C-terminal domain LQ330_RS06380 PF00437 Type II/IV secretion system protein LQ330_RS06380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ330_RS06385 PF00482 Type II secretion system (T2SS), protein F LQ330_RS06390 PF08334 Type II secretion system (T2SS), protein G LQ330_RS06395 PF12019 Type II transport protein GspH LQ330_RS06400 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS06410 PF03934 Type II secretion system (T2SS), protein K LQ330_RS06415 PF05137 Fimbrial assembly protein (PilN) LQ330_RS06420 PF10741 Type II secretion system (T2SS), protein M subtype b LQ330_RS06430 PF00263 Bacterial type II and III secretion system protein LQ330_RS06430 PF03958 Bacterial type II/III secretion system short domain LQ330_RS06440 PF00535 Glycosyl transferase family 2 LQ330_RS06445 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LQ330_RS06445 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LQ330_RS06455 PF16970 Type-1 fimbrial protein, A LQ330_RS06460 PF02753 Pili assembly chaperone PapD, C-terminal domain LQ330_RS06460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LQ330_RS06465 PF13953 PapC C-terminal domain LQ330_RS06465 PF13954 PapC N-terminal domain LQ330_RS06465 PF00577 Outer membrane usher protein LQ330_RS06475 PF02350 UDP-N-acetylglucosamine 2-epimerase LQ330_RS06485 PF13632 Glycosyl transferase family group 2 LQ330_RS06485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ330_RS06500 PF00860 Permease family LQ330_RS06510 PF00005 ABC transporter LQ330_RS06510 PF12848 ABC transporter LQ330_RS06520 PF00464 Serine hydroxymethyltransferase LQ330_RS06540 PF03477 ATP cone domain LQ330_RS06545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQ330_RS06545 PF01872 RibD C-terminal domain LQ330_RS06575 PF00677 Lumazine binding domain LQ330_RS06580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQ330_RS06580 PF00925 GTP cyclohydrolase II LQ330_RS06585 PF00885 6,7-dimethyl-8-ribityllumazine synthase LQ330_RS06590 PF01029 NusB family LQ330_RS06595 PF00586 AIR synthase related protein, N-terminal domain LQ330_RS06595 PF02769 AIR synthase related protein, C-terminal domain LQ330_RS06605 PF03797 Autotransporter beta-domain LQ330_RS06610 PF03797 Autotransporter beta-domain LQ330_RS06615 PF01757 Acyltransferase family LQ330_RS06620 PF02913 FAD linked oxidases, C-terminal domain LQ330_RS06620 PF01565 FAD binding domain LQ330_RS06625 PF04307 LexA-binding, inner membrane-associated putative hydrolase LQ330_RS06630 PF02021 Uncharacterised protein family UPF0102 LQ330_RS06640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQ330_RS06670 PF02381 MraZ protein, putative antitoxin-like LQ330_RS06675 PF01795 MraW methylase family LQ330_RS06680 PF04999 Cell division protein FtsL LQ330_RS06685 PF03717 Penicillin-binding Protein dimerisation domain LQ330_RS06685 PF00905 Penicillin binding protein transpeptidase domain LQ330_RS06690 PF01225 Mur ligase family, catalytic domain LQ330_RS06690 PF02875 Mur ligase family, glutamate ligase domain LQ330_RS06690 PF08245 Mur ligase middle domain LQ330_RS06695 PF08245 Mur ligase middle domain LQ330_RS06695 PF02875 Mur ligase family, glutamate ligase domain LQ330_RS06695 PF01225 Mur ligase family, catalytic domain LQ330_RS06700 PF00953 Glycosyl transferase family 4 LQ330_RS06705 PF01098 Cell cycle protein LQ330_RS06710 PF04101 Glycosyltransferase family 28 C-terminal domain LQ330_RS06710 PF03033 Glycosyltransferase family 28 N-terminal domain LQ330_RS06715 PF02875 Mur ligase family, glutamate ligase domain LQ330_RS06715 PF01225 Mur ligase family, catalytic domain LQ330_RS06715 PF08245 Mur ligase middle domain LQ330_RS06720 PF07478 D-ala D-ala ligase C-terminus LQ330_RS06720 PF01820 D-ala D-ala ligase N-terminus LQ330_RS06725 PF03799 Cell division protein FtsQ LQ330_RS06725 PF08478 POTRA domain, FtsQ-type LQ330_RS06730 PF02491 SHS2 domain inserted in FTSA LQ330_RS06735 PF12327 FtsZ family, C-terminal domain LQ330_RS06735 PF00091 Tubulin/FtsZ family, GTPase domain LQ330_RS06740 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LQ330_RS06750 PF01551 Peptidase family M23 LQ330_RS06750 PF01476 LysM domain LQ330_RS06750 PF08525 Opacity-associated protein A N-terminal motif LQ330_RS06755 PF02810 SEC-C motif LQ330_RS06755 PF07517 SecA DEAD-like domain LQ330_RS06755 PF01043 SecA preprotein cross-linking domain LQ330_RS06755 PF07516 SecA Wing and Scaffold domain LQ330_RS06760 PF00293 NUDIX domain LQ330_RS06770 PF02219 Methylenetetrahydrofolate reductase LQ330_RS06775 PF12146 Serine aminopeptidase, S33 LQ330_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS06780 PF06580 Histidine kinase LQ330_RS06780 PF07694 5TMR of 5TMR-LYT LQ330_RS06785 PF00072 Response regulator receiver domain LQ330_RS06785 PF04397 LytTr DNA-binding domain LQ330_RS06800 PF04073 Aminoacyl-tRNA editing domain LQ330_RS06805 PF05221 S-adenosyl-L-homocysteine hydrolase LQ330_RS06805 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LQ330_RS06815 PF00311 Phosphoenolpyruvate carboxylase LQ330_RS06820 PF03061 Thioesterase superfamily LQ330_RS06825 PF02773 S-adenosylmethionine synthetase, C-terminal domain LQ330_RS06825 PF02772 S-adenosylmethionine synthetase, central domain LQ330_RS06825 PF00438 S-adenosylmethionine synthetase, N-terminal domain LQ330_RS06850 PF13847 Methyltransferase domain LQ330_RS06855 PF01207 Dihydrouridine synthase (Dus) LQ330_RS06865 PF00294 pfkB family carbohydrate kinase LQ330_RS06870 PF07670 Nucleoside recognition LQ330_RS06870 PF07662 Na+ dependent nucleoside transporter C-terminus LQ330_RS06870 PF01773 Na+ dependent nucleoside transporter N-terminus LQ330_RS06875 PF00248 Aldo/keto reductase family LQ330_RS06885 PF00593 TonB dependent receptor LQ330_RS06885 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS06905 PF00005 ABC transporter LQ330_RS06910 PF13472 GDSL-like Lipase/Acylhydrolase family LQ330_RS06915 PF00072 Response regulator receiver domain LQ330_RS06915 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS06920 PF08521 Two-component sensor kinase N-terminal LQ330_RS06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS06920 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS06930 PF01219 Prokaryotic diacylglycerol kinase LQ330_RS06935 PF03741 Integral membrane protein TerC family LQ330_RS06940 PF07690 Major Facilitator Superfamily LQ330_RS06945 PF04011 LemA family LQ330_RS06960 PF01790 Prolipoprotein diacylglyceryl transferase LQ330_RS06965 PF00303 Thymidylate synthase LQ330_RS06970 PF00186 Dihydrofolate reductase LQ330_RS06975 PF06940 Domain of unknown function (DUF1287) LQ330_RS06980 PF00149 Calcineurin-like phosphoesterase LQ330_RS06985 PF04379 ApaG domain LQ330_RS06990 PF00398 Ribosomal RNA adenine dimethylase LQ330_RS06995 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LQ330_RS07000 PF00639 PPIC-type PPIASE domain LQ330_RS07000 PF09312 SurA N-terminal domain LQ330_RS07005 PF03968 OstA-like protein LQ330_RS07005 PF04453 LPS transport system D LQ330_RS07010 PF00850 Histone deacetylase domain LQ330_RS07015 PF01923 Cobalamin adenosyltransferase LQ330_RS07025 PF01494 FAD binding domain LQ330_RS07030 PF01494 FAD binding domain LQ330_RS07035 PF13202 EF hand LQ330_RS07035 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQ330_RS07040 PF01728 FtsJ-like methyltransferase LQ330_RS07040 PF18125 RlmM ferredoxin-like domain LQ330_RS07060 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQ330_RS07060 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LQ330_RS07070 PF01625 Peptide methionine sulfoxide reductase LQ330_RS07075 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQ330_RS07080 PF01272 Transcription elongation factor, GreA/GreB, C-term LQ330_RS07080 PF14760 Rnk N-terminus LQ330_RS07085 PF03466 LysR substrate binding domain LQ330_RS07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS07090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS07090 PF13192 Thioredoxin domain LQ330_RS07095 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQ330_RS07095 PF00578 AhpC/TSA family LQ330_RS07100 PF17827 PrmC N-terminal domain LQ330_RS07100 PF05175 Methyltransferase small domain LQ330_RS07105 PF00561 alpha/beta hydrolase fold LQ330_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS07110 PF03466 LysR substrate binding domain LQ330_RS07115 PF07690 Major Facilitator Superfamily LQ330_RS07125 PF00293 NUDIX domain LQ330_RS07130 PF00476 DNA polymerase family A LQ330_RS07130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQ330_RS07130 PF01367 5'-3' exonuclease, C-terminal SAM fold LQ330_RS07130 PF01612 3'-5' exonuclease LQ330_RS07145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQ330_RS07145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQ330_RS07145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQ330_RS07165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQ330_RS07165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQ330_RS07165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQ330_RS07170 PF02233 NAD(P) transhydrogenase beta subunit LQ330_RS07180 PF01883 Iron-sulfur cluster assembly protein LQ330_RS07185 PF01063 Amino-transferase class IV LQ330_RS07205 PF04151 Bacterial pre-peptidase C-terminal domain LQ330_RS07205 PF00082 Subtilase family LQ330_RS07220 PF03358 NADPH-dependent FMN reductase LQ330_RS07225 PF03631 Virulence factor BrkB LQ330_RS07230 PF00578 AhpC/TSA family LQ330_RS07235 PF03976 Polyphosphate kinase 2 (PPK2) LQ330_RS07245 PF03462 PCRF domain LQ330_RS07245 PF00472 RF-1 domain LQ330_RS07250 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LQ330_RS07250 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LQ330_RS07250 PF01488 Shikimate / quinate 5-dehydrogenase LQ330_RS07260 PF03550 Outer membrane lipoprotein LolB LQ330_RS07265 PF00288 GHMP kinases N terminal domain LQ330_RS07265 PF08544 GHMP kinases C terminal LQ330_RS07275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQ330_RS07275 PF14572 Phosphoribosyl synthetase-associated domain LQ330_RS07280 PF01386 Ribosomal L25p family LQ330_RS07280 PF14693 Ribosomal protein TL5, C-terminal domain LQ330_RS07285 PF01195 Peptidyl-tRNA hydrolase LQ330_RS07290 PF01926 50S ribosome-binding GTPase LQ330_RS07290 PF06071 Protein of unknown function (DUF933) LQ330_RS07295 PF03797 Autotransporter beta-domain LQ330_RS07295 PF12951 Passenger-associated-transport-repeat LQ330_RS07300 PF00072 Response regulator receiver domain LQ330_RS07300 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS07305 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ330_RS07305 PF00072 Response regulator receiver domain LQ330_RS07305 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS07310 PF00563 EAL domain LQ330_RS07310 PF01590 GAF domain LQ330_RS07310 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS07310 PF00989 PAS fold LQ330_RS07315 PF00072 Response regulator receiver domain LQ330_RS07315 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS07315 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ330_RS07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS07320 PF00593 TonB dependent receptor LQ330_RS07320 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS07330 PF01112 Asparaginase LQ330_RS07350 PF03143 Elongation factor Tu C-terminal domain LQ330_RS07350 PF03144 Elongation factor Tu domain 2 LQ330_RS07350 PF00009 Elongation factor Tu GTP binding domain LQ330_RS07360 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LQ330_RS07365 PF02357 Transcription termination factor nusG LQ330_RS07365 PF00467 KOW motif LQ330_RS07370 PF03946 Ribosomal protein L11, N-terminal domain LQ330_RS07370 PF00298 Ribosomal protein L11, RNA binding domain LQ330_RS07375 PF00687 Ribosomal protein L1p/L10e family LQ330_RS07380 PF00466 Ribosomal protein L10 LQ330_RS07385 PF00542 Ribosomal protein L7/L12 C-terminal domain LQ330_RS07385 PF16320 Ribosomal protein L7/L12 dimerisation domain LQ330_RS07390 PF04561 RNA polymerase Rpb2, domain 2 LQ330_RS07390 PF04563 RNA polymerase beta subunit LQ330_RS07390 PF04560 RNA polymerase Rpb2, domain 7 LQ330_RS07390 PF00562 RNA polymerase Rpb2, domain 6 LQ330_RS07390 PF10385 RNA polymerase beta subunit external 1 domain LQ330_RS07390 PF04565 RNA polymerase Rpb2, domain 3 LQ330_RS07395 PF00623 RNA polymerase Rpb1, domain 2 LQ330_RS07395 PF04983 RNA polymerase Rpb1, domain 3 LQ330_RS07395 PF05000 RNA polymerase Rpb1, domain 4 LQ330_RS07395 PF04997 RNA polymerase Rpb1, domain 1 LQ330_RS07395 PF04998 RNA polymerase Rpb1, domain 5 LQ330_RS07400 PF00164 Ribosomal protein S12/S23 LQ330_RS07405 PF00177 Ribosomal protein S7p/S5e LQ330_RS07410 PF00679 Elongation factor G C-terminus LQ330_RS07410 PF00009 Elongation factor Tu GTP binding domain LQ330_RS07410 PF03764 Elongation factor G, domain IV LQ330_RS07410 PF03144 Elongation factor Tu domain 2 LQ330_RS07410 PF14492 Elongation Factor G, domain II LQ330_RS07415 PF03144 Elongation factor Tu domain 2 LQ330_RS07415 PF03143 Elongation factor Tu C-terminal domain LQ330_RS07415 PF00009 Elongation factor Tu GTP binding domain LQ330_RS07420 PF00338 Ribosomal protein S10p/S20e LQ330_RS07425 PF00297 Ribosomal protein L3 LQ330_RS07430 PF00573 Ribosomal protein L4/L1 family LQ330_RS07435 PF00276 Ribosomal protein L23 LQ330_RS07440 PF03947 Ribosomal Proteins L2, C-terminal domain LQ330_RS07440 PF00181 Ribosomal Proteins L2, RNA binding domain LQ330_RS07445 PF00203 Ribosomal protein S19 LQ330_RS07450 PF00237 Ribosomal protein L22p/L17e LQ330_RS07455 PF00189 Ribosomal protein S3, C-terminal domain LQ330_RS07455 PF07650 KH domain LQ330_RS07460 PF00252 Ribosomal protein L16p/L10e LQ330_RS07465 PF00831 Ribosomal L29 protein LQ330_RS07470 PF00366 Ribosomal protein S17 LQ330_RS07475 PF00238 Ribosomal protein L14p/L23e LQ330_RS07480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LQ330_RS07480 PF00467 KOW motif LQ330_RS07485 PF00281 Ribosomal protein L5 LQ330_RS07485 PF00673 ribosomal L5P family C-terminus LQ330_RS07490 PF00253 Ribosomal protein S14p/S29e LQ330_RS07495 PF00410 Ribosomal protein S8 LQ330_RS07500 PF00347 Ribosomal protein L6 LQ330_RS07505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LQ330_RS07510 PF03719 Ribosomal protein S5, C-terminal domain LQ330_RS07510 PF00333 Ribosomal protein S5, N-terminal domain LQ330_RS07515 PF00327 Ribosomal protein L30p/L7e LQ330_RS07520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LQ330_RS07525 PF00344 SecY translocase LQ330_RS07530 PF00416 Ribosomal protein S13/S18 LQ330_RS07535 PF00411 Ribosomal protein S11 LQ330_RS07540 PF01479 S4 domain LQ330_RS07540 PF00163 Ribosomal protein S4/S9 N-terminal domain LQ330_RS07545 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LQ330_RS07545 PF01000 RNA polymerase Rpb3/RpoA insert domain LQ330_RS07545 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LQ330_RS07550 PF01196 Ribosomal protein L17 LQ330_RS07555 PF02600 Disulfide bond formation protein DsbB LQ330_RS07560 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS07560 PF00593 TonB dependent receptor LQ330_RS07565 PF01474 Class-II DAHP synthetase family LQ330_RS07575 PF01425 Amidase LQ330_RS07585 PF03144 Elongation factor Tu domain 2 LQ330_RS07585 PF00679 Elongation factor G C-terminus LQ330_RS07585 PF00009 Elongation factor Tu GTP binding domain LQ330_RS07590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQ330_RS07595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LQ330_RS07595 PF00056 lactate/malate dehydrogenase, NAD binding domain LQ330_RS07600 PF00849 RNA pseudouridylate synthase LQ330_RS07605 PF16177 Acetyl-coenzyme A synthetase N-terminus LQ330_RS07605 PF00501 AMP-binding enzyme LQ330_RS07605 PF13193 AMP-binding enzyme C-terminal domain LQ330_RS07620 PF00043 Glutathione S-transferase, C-terminal domain LQ330_RS07620 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS07630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS07630 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS07640 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS07640 PF00107 Zinc-binding dehydrogenase LQ330_RS07645 PF05736 OprF membrane domain LQ330_RS07645 PF00691 OmpA family LQ330_RS07655 PF01479 S4 domain LQ330_RS07655 PF00849 RNA pseudouridylate synthase LQ330_RS07665 PF00155 Aminotransferase class I and II LQ330_RS07675 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS07675 PF00107 Zinc-binding dehydrogenase LQ330_RS07680 PF10459 Peptidase S46 LQ330_RS07685 PF00300 Histidine phosphatase superfamily (branch 1) LQ330_RS07690 PF08245 Mur ligase middle domain LQ330_RS07690 PF02875 Mur ligase family, glutamate ligase domain LQ330_RS07705 PF00156 Phosphoribosyl transferase domain LQ330_RS07710 PF04305 Protein of unknown function (DUF455) LQ330_RS07725 PF00149 Calcineurin-like phosphoesterase LQ330_RS07730 PF01569 PAP2 superfamily LQ330_RS07735 PF00534 Glycosyl transferases group 1 LQ330_RS07735 PF13439 Glycosyltransferase Family 4 LQ330_RS07740 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS07740 PF00593 TonB dependent receptor LQ330_RS07745 PF02541 Ppx/GppA phosphatase family LQ330_RS07750 PF00665 Integrase core domain LQ330_RS07750 PF13276 HTH-like domain LQ330_RS07750 PF13333 Integrase core domain LQ330_RS07755 PF01527 Transposase LQ330_RS07760 PF02503 Polyphosphate kinase middle domain LQ330_RS07760 PF13090 Polyphosphate kinase C-terminal domain 2 LQ330_RS07760 PF17941 Polyphosphate kinase C-terminal domain 1 LQ330_RS07760 PF13089 Polyphosphate kinase N-terminal domain LQ330_RS07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS07765 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS07765 PF00989 PAS fold LQ330_RS07765 PF11808 Phosphate regulon sensor protein PhoR LQ330_RS07770 PF00072 Response regulator receiver domain LQ330_RS07770 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS07775 PF07720 Tetratricopeptide repeat LQ330_RS07775 PF01435 Peptidase family M48 LQ330_RS07780 PF00462 Glutaredoxin LQ330_RS07790 PF00180 Isocitrate/isopropylmalate dehydrogenase LQ330_RS07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS07805 PF03466 LysR substrate binding domain LQ330_RS07855 PF05697 Bacterial trigger factor protein (TF) LQ330_RS07855 PF05698 Bacterial trigger factor protein (TF) C-terminus LQ330_RS07860 PF00574 Clp protease LQ330_RS07865 PF10431 C-terminal, D2-small domain, of ClpB protein LQ330_RS07865 PF06689 ClpX C4-type zinc finger LQ330_RS07865 PF07724 AAA domain (Cdc48 subfamily) LQ330_RS07870 PF02190 ATP-dependent protease La (LON) substrate-binding domain LQ330_RS07870 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS07870 PF05362 Lon protease (S16) C-terminal proteolytic domain LQ330_RS07875 PF00216 Bacterial DNA-binding protein LQ330_RS07910 PF05698 Bacterial trigger factor protein (TF) C-terminus LQ330_RS07915 PF01476 LysM domain LQ330_RS07915 PF05257 CHAP domain LQ330_RS07920 PF00753 Metallo-beta-lactamase superfamily LQ330_RS07920 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQ330_RS07925 PF08241 Methyltransferase domain LQ330_RS07930 PF00075 RNase H LQ330_RS07935 PF00929 Exonuclease LQ330_RS07955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQ330_RS07965 PF12706 Beta-lactamase superfamily domain LQ330_RS07975 PF00893 Small Multidrug Resistance protein LQ330_RS07990 PF12158 Protein of unknown function (DUF3592) LQ330_RS08025 PF02086 D12 class N6 adenine-specific DNA methyltransferase LQ330_RS08070 PF03389 MobA/MobL family LQ330_RS08085 PF12169 DNA polymerase III subunits gamma and tau domain III LQ330_RS08085 PF12170 DNA polymerase III tau subunit V interacting with alpha LQ330_RS08085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LQ330_RS08090 PF02575 YbaB/EbfC DNA-binding family LQ330_RS08095 PF13662 Toprim domain LQ330_RS08095 PF02132 RecR protein LQ330_RS08100 PF01230 HIT domain LQ330_RS08110 PF01841 Transglutaminase-like superfamily LQ330_RS08110 PF13559 Domain of unknown function (DUF4129) LQ330_RS08110 PF11992 Domain of unknown function (DUF3488) LQ330_RS08120 PF07726 ATPase family associated with various cellular activities (AAA) LQ330_RS08120 PF17863 AAA lid domain LQ330_RS08130 PF02545 Maf-like protein LQ330_RS08135 PF02620 Large ribosomal RNA subunit accumulation protein YceD LQ330_RS08140 PF01783 Ribosomal L32p protein family LQ330_RS08145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQ330_RS08145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQ330_RS08155 PF00698 Acyl transferase domain LQ330_RS08165 PF00550 Phosphopantetheine attachment site LQ330_RS08170 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ330_RS08170 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ330_RS08175 PF04715 Anthranilate synthase component I, N terminal region LQ330_RS08175 PF00425 chorismate binding enzyme LQ330_RS08180 PF02618 YceG-like family LQ330_RS08185 PF02223 Thymidylate kinase LQ330_RS08190 PF09115 DNA polymerase III, delta subunit, C terminal LQ330_RS08215 PF14552 Tautomerase enzyme LQ330_RS08250 PF04984 Phage tail sheath protein subtilisin-like domain LQ330_RS08250 PF17482 Phage tail sheath C-terminal domain LQ330_RS08295 PF06737 Transglycosylase-like domain LQ330_RS08345 PF00593 TonB dependent receptor LQ330_RS08345 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS08355 PF07690 Major Facilitator Superfamily LQ330_RS08360 PF08220 DeoR-like helix-turn-helix domain LQ330_RS08360 PF00455 DeoR C terminal sensor domain LQ330_RS08365 PF13599 Pentapeptide repeats (9 copies) LQ330_RS08370 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS08370 PF00155 Aminotransferase class I and II LQ330_RS08375 PF00892 EamA-like transporter family LQ330_RS08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS08380 PF03466 LysR substrate binding domain LQ330_RS08385 PF07690 Major Facilitator Superfamily LQ330_RS08405 PF07690 Major Facilitator Superfamily LQ330_RS08410 PF00376 MerR family regulatory protein LQ330_RS08410 PF09278 MerR, DNA binding LQ330_RS08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS08420 PF03466 LysR substrate binding domain LQ330_RS08425 PF03807 NADP oxidoreductase coenzyme F420-dependent LQ330_RS08425 PF14748 Pyrroline-5-carboxylate reductase dimerisation LQ330_RS08430 PF01168 Alanine racemase, N-terminal domain LQ330_RS08435 PF00437 Type II/IV secretion system protein LQ330_RS08440 PF00437 Type II/IV secretion system protein LQ330_RS08450 PF00248 Aldo/keto reductase family LQ330_RS08455 PF03466 LysR substrate binding domain LQ330_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS08470 PF03352 Methyladenine glycosylase LQ330_RS08475 PF02622 Uncharacterized ACR, COG1678 LQ330_RS08480 PF03652 Holliday junction resolvase LQ330_RS08485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQ330_RS08485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQ330_RS08505 PF03448 MgtE intracellular N domain LQ330_RS08505 PF01769 Divalent cation transporter LQ330_RS08505 PF00571 CBS domain LQ330_RS08510 PF02896 PEP-utilising enzyme, TIM barrel domain LQ330_RS08510 PF00391 PEP-utilising enzyme, mobile domain LQ330_RS08510 PF05524 PEP-utilising enzyme, N-terminal LQ330_RS08515 PF00381 PTS HPr component phosphorylation site LQ330_RS08525 PF03668 P-loop ATPase protein family LQ330_RS08530 PF02603 HPr Serine kinase N terminus LQ330_RS08530 PF07475 HPr Serine kinase C-terminal domain LQ330_RS08535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQ330_RS08540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LQ330_RS08545 PF04552 Sigma-54, DNA binding domain LQ330_RS08545 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQ330_RS08545 PF04963 Sigma-54 factor, core binding domain LQ330_RS08550 PF00005 ABC transporter LQ330_RS08550 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQ330_RS08570 PF01380 SIS domain LQ330_RS08570 PF00571 CBS domain LQ330_RS08580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQ330_RS08600 PF00551 Formyl transferase LQ330_RS08620 PF02769 AIR synthase related protein, C-terminal domain LQ330_RS08620 PF00586 AIR synthase related protein, N-terminal domain LQ330_RS08630 PF01594 AI-2E family transporter LQ330_RS08635 PF00308 Bacterial dnaA protein LQ330_RS08640 PF00483 Nucleotidyl transferase LQ330_RS08645 PF01636 Phosphotransferase enzyme family LQ330_RS08650 PF04226 Transglycosylase associated protein LQ330_RS08680 PF00667 FAD binding domain LQ330_RS08680 PF00258 Flavodoxin LQ330_RS08680 PF00175 Oxidoreductase NAD-binding domain LQ330_RS08685 PF02424 ApbE family LQ330_RS08705 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS08705 PF00593 TonB dependent receptor LQ330_RS08715 PF18331 PKHD-type hydroxylase C-terminal domain LQ330_RS08715 PF13640 2OG-Fe(II) oxygenase superfamily LQ330_RS08725 PF00593 TonB dependent receptor LQ330_RS08725 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS08735 PF00355 Rieske [2Fe-2S] domain LQ330_RS08765 PF00266 Aminotransferase class-V LQ330_RS08770 PF01458 Uncharacterized protein family (UPF0051) LQ330_RS08775 PF00005 ABC transporter LQ330_RS08780 PF01458 Uncharacterized protein family (UPF0051) LQ330_RS08785 PF02082 Transcriptional regulator LQ330_RS08795 PF01965 DJ-1/PfpI family LQ330_RS08820 PF02566 OsmC-like protein LQ330_RS08825 PF02567 Phenazine biosynthesis-like protein LQ330_RS08830 PF02567 Phenazine biosynthesis-like protein LQ330_RS08835 PF00696 Amino acid kinase family LQ330_RS08835 PF01842 ACT domain LQ330_RS08845 PF02875 Mur ligase family, glutamate ligase domain LQ330_RS08845 PF08245 Mur ligase middle domain LQ330_RS08865 PF00348 Polyprenyl synthetase LQ330_RS08870 PF00128 Alpha amylase, catalytic domain LQ330_RS08880 PF10566 Glycoside hydrolase 97 LQ330_RS08880 PF14508 Glycosyl-hydrolase 97 N-terminal LQ330_RS08880 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LQ330_RS08890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LQ330_RS08895 PF00128 Alpha amylase, catalytic domain LQ330_RS08895 PF00686 Starch binding domain LQ330_RS08915 PF00005 ABC transporter LQ330_RS08915 PF13732 Domain of unknown function (DUF4162) LQ330_RS08920 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS08925 PF00436 Single-strand binding protein family LQ330_RS08945 PF00732 GMC oxidoreductase LQ330_RS08945 PF05199 GMC oxidoreductase LQ330_RS08960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQ330_RS08970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQ330_RS08970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ330_RS08975 PF03825 Nucleoside H+ symporter LQ330_RS08985 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS08990 PF00563 EAL domain LQ330_RS08990 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS08990 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS09000 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS09030 PF13443 Cro/C1-type HTH DNA-binding domain LQ330_RS09035 PF03471 Transporter associated domain LQ330_RS09035 PF03741 Integral membrane protein TerC family LQ330_RS09035 PF00571 CBS domain LQ330_RS09040 PF00149 Calcineurin-like phosphoesterase LQ330_RS09045 PF01794 Ferric reductase like transmembrane component LQ330_RS09055 PF05114 Protein of unknown function (DUF692) LQ330_RS09065 PF07681 DoxX LQ330_RS09075 PF00578 AhpC/TSA family LQ330_RS09075 PF02683 Cytochrome C biogenesis protein transmembrane region LQ330_RS09075 PF17991 Thioredoxin like C-terminal domain LQ330_RS09080 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS09080 PF00072 Response regulator receiver domain LQ330_RS09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS09085 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS09085 PF00672 HAMP domain LQ330_RS09090 PF00083 Sugar (and other) transporter LQ330_RS09090 PF08946 Osmosensory transporter coiled coil LQ330_RS09095 PF01156 Inosine-uridine preferring nucleoside hydrolase LQ330_RS09105 PF07729 FCD domain LQ330_RS09105 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS09115 PF00698 Acyl transferase domain LQ330_RS09120 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LQ330_RS09125 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LQ330_RS09135 PF01039 Carboxyl transferase domain LQ330_RS09140 PF06857 Malonate decarboxylase delta subunit (MdcD) LQ330_RS09145 PF16957 Malonate decarboxylase, alpha subunit, transporter LQ330_RS09150 PF00593 TonB dependent receptor LQ330_RS09150 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS09150 PF07660 Secretin and TonB N terminus short domain LQ330_RS09155 PF06039 Malate:quinone oxidoreductase (Mqo) LQ330_RS09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS09160 PF03466 LysR substrate binding domain LQ330_RS09165 PF01810 LysE type translocator LQ330_RS09175 PF00854 POT family LQ330_RS09185 PF03169 OPT oligopeptide transporter protein LQ330_RS09190 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LQ330_RS09190 PF07676 WD40-like Beta Propeller Repeat LQ330_RS09190 PF00326 Prolyl oligopeptidase family LQ330_RS09205 PF03776 Septum formation topological specificity factor MinE LQ330_RS09210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQ330_RS09215 PF05209 Septum formation inhibitor MinC, N-terminal domain LQ330_RS09215 PF03775 Septum formation inhibitor MinC, C-terminal domain LQ330_RS09225 PF07730 Histidine kinase LQ330_RS09230 PF00072 Response regulator receiver domain LQ330_RS09230 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS09270 PF01370 NAD dependent epimerase/dehydratase family LQ330_RS09270 PF02222 ATP-grasp domain LQ330_RS09280 PF04376 Arginine-tRNA-protein transferase, N terminus LQ330_RS09280 PF04377 Arginine-tRNA-protein transferase, C terminus LQ330_RS09290 PF08281 Sigma-70, region 4 LQ330_RS09290 PF04542 Sigma-70 region 2 LQ330_RS09305 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS09325 PF17755 UvrA DNA-binding domain LQ330_RS09325 PF17760 UvrA interaction domain LQ330_RS09325 PF00005 ABC transporter LQ330_RS09330 PF00829 Ribosomal prokaryotic L21 protein LQ330_RS09335 PF01016 Ribosomal L27 protein LQ330_RS09340 PF01018 GTP1/OBG LQ330_RS09340 PF01926 50S ribosome-binding GTPase LQ330_RS09345 PF01649 Ribosomal protein S20 LQ330_RS09350 PF03023 Lipid II flippase MurJ LQ330_RS09355 PF06574 FAD synthetase LQ330_RS09355 PF01687 Riboflavin kinase LQ330_RS09360 PF06827 Zinc finger found in FPG and IleRS LQ330_RS09360 PF00133 tRNA synthetases class I (I, L, M and V) LQ330_RS09360 PF08264 Anticodon-binding domain of tRNA LQ330_RS09365 PF01252 Signal peptidase (SPase) II LQ330_RS09370 PF02401 LytB protein LQ330_RS09380 PF07947 YhhN family LQ330_RS09395 PF00593 TonB dependent receptor LQ330_RS09395 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS09415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQ330_RS09415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQ330_RS09450 PF06481 COX Aromatic Rich Motif LQ330_RS09450 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQ330_RS09455 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQ330_RS09460 PF00510 Cytochrome c oxidase subunit III LQ330_RS09465 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LQ330_RS09470 PF00563 EAL domain LQ330_RS09470 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS09470 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS09475 PF18073 Rubredoxin metal binding domain LQ330_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS09480 PF00183 Hsp90 protein LQ330_RS09500 PF02978 Signal peptide binding domain LQ330_RS09500 PF02881 SRP54-type protein, helical bundle domain LQ330_RS09500 PF00448 SRP54-type protein, GTPase domain LQ330_RS09505 PF03060 Nitronate monooxygenase LQ330_RS09515 PF00886 Ribosomal protein S16 LQ330_RS09520 PF01782 RimM N-terminal domain LQ330_RS09520 PF05239 PRC-barrel domain LQ330_RS09525 PF01746 tRNA (Guanine-1)-methyltransferase LQ330_RS09530 PF01245 Ribosomal protein L19 LQ330_RS09550 PF01554 MatE LQ330_RS09560 PF01479 S4 domain LQ330_RS09570 PF00199 Catalase LQ330_RS09570 PF06628 Catalase-related immune-responsive LQ330_RS09575 PF05188 MutS domain II LQ330_RS09575 PF05190 MutS family domain IV LQ330_RS09575 PF05192 MutS domain III LQ330_RS09575 PF00488 MutS domain V LQ330_RS09575 PF01624 MutS domain I LQ330_RS09625 PF13362 Toprim domain LQ330_RS09625 PF08401 Domain of unknown function (DUF1738) LQ330_RS09625 PF18818 Metallopeptidase superfamily domain LQ330_RS09660 PF01555 DNA methylase LQ330_RS09725 PF00158 Sigma-54 interaction domain LQ330_RS09725 PF00072 Response regulator receiver domain LQ330_RS09725 PF02954 Bacterial regulatory protein, Fis family LQ330_RS09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS09730 PF13426 PAS domain LQ330_RS09730 PF00072 Response regulator receiver domain LQ330_RS09735 PF00072 Response regulator receiver domain LQ330_RS09735 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS09740 PF01161 Phosphatidylethanolamine-binding protein LQ330_RS09745 PF05974 Domain of unknown function (DUF892) LQ330_RS09750 PF02735 Ku70/Ku80 beta-barrel domain LQ330_RS09760 PF04679 ATP dependent DNA ligase C terminal region LQ330_RS09760 PF13298 DNA polymerase Ligase (LigD) LQ330_RS09760 PF01068 ATP dependent DNA ligase domain LQ330_RS09870 PF13614 AAA domain LQ330_RS09950 PF12615 F sex factor protein N terminal LQ330_RS09950 PF10412 Type IV secretion-system coupling protein DNA-binding domain LQ330_RS09955 PF01443 Viral (Superfamily 1) RNA helicase LQ330_RS09955 PF17841 BID domain of Bartonella effector protein (Bep) LQ330_RS09955 PF03389 MobA/MobL family LQ330_RS09970 PF03895 YadA-like membrane anchor domain LQ330_RS09970 PF05658 Head domain of trimeric autotransporter adhesin LQ330_RS09970 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ330_RS09985 PF13099 Domain of unknown function (DUF3944) LQ330_RS09985 PF03981 Ubiquinol-cytochrome C chaperone LQ330_RS09995 PF00672 HAMP domain LQ330_RS09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS10000 PF05433 Glycine zipper 2TM domain LQ330_RS10020 PF13533 Biotin-lipoyl like LQ330_RS10035 PF01810 LysE type translocator LQ330_RS10040 PF00557 Metallopeptidase family M24 LQ330_RS10065 PF00202 Aminotransferase class-III LQ330_RS10075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQ330_RS10080 PF00892 EamA-like transporter family LQ330_RS10085 PF00892 EamA-like transporter family LQ330_RS10090 PF12146 Serine aminopeptidase, S33 LQ330_RS10095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS10095 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS10100 PF00072 Response regulator receiver domain LQ330_RS10100 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS10110 PF01638 HxlR-like helix-turn-helix LQ330_RS10120 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10125 PF00593 TonB dependent receptor LQ330_RS10125 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS10135 PF01545 Cation efflux family LQ330_RS10140 PF04493 Endonuclease V LQ330_RS10145 PF00300 Histidine phosphatase superfamily (branch 1) LQ330_RS10150 PF01431 Peptidase family M13 LQ330_RS10150 PF05649 Peptidase family M13 LQ330_RS10155 PF00072 Response regulator receiver domain LQ330_RS10160 PF00271 Helicase conserved C-terminal domain LQ330_RS10160 PF00270 DEAD/DEAH box helicase LQ330_RS10160 PF02559 CarD-like/TRCF domain LQ330_RS10160 PF17757 UvrB interaction domain LQ330_RS10160 PF03461 TRCF domain LQ330_RS10170 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LQ330_RS10175 PF00072 Response regulator receiver domain LQ330_RS10175 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS10180 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS10180 PF00672 HAMP domain LQ330_RS10185 PF06123 Inner membrane protein CreD LQ330_RS10195 PF02225 PA domain LQ330_RS10195 PF04389 Peptidase family M28 LQ330_RS10200 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQ330_RS10205 PF01475 Ferric uptake regulator family LQ330_RS10210 PF13533 Biotin-lipoyl like LQ330_RS10235 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS10235 PF00593 TonB dependent receptor LQ330_RS10255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQ330_RS10255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQ330_RS10260 PF02805 Metal binding domain of Ada LQ330_RS10260 PF06029 AlkA N-terminal domain LQ330_RS10260 PF12833 Helix-turn-helix domain LQ330_RS10260 PF00730 HhH-GPD superfamily base excision DNA repair protein LQ330_RS10280 PF01494 FAD binding domain LQ330_RS10290 PF00271 Helicase conserved C-terminal domain LQ330_RS10290 PF03880 DbpA RNA binding domain LQ330_RS10290 PF00270 DEAD/DEAH box helicase LQ330_RS10300 PF00563 EAL domain LQ330_RS10300 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10300 PF08448 PAS fold LQ330_RS10305 PF00072 Response regulator receiver domain LQ330_RS10305 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10310 PF01479 S4 domain LQ330_RS10310 PF00849 RNA pseudouridylate synthase LQ330_RS10315 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10340 PF00144 Beta-lactamase LQ330_RS10345 PF00664 ABC transporter transmembrane region LQ330_RS10345 PF00005 ABC transporter LQ330_RS10350 PF00328 Histidine phosphatase superfamily (branch 2) LQ330_RS10355 PF05426 Alginate lyase LQ330_RS10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS10380 PF03466 LysR substrate binding domain LQ330_RS10390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQ330_RS10395 PF03551 Transcriptional regulator PadR-like family LQ330_RS10415 PF03653 Uncharacterised protein family (UPF0093) LQ330_RS10420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LQ330_RS10430 PF01336 OB-fold nucleic acid binding domain LQ330_RS10430 PF14579 Helix-hairpin-helix motif LQ330_RS10430 PF02811 PHP domain LQ330_RS10430 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQ330_RS10430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQ330_RS10435 PF01351 Ribonuclease HII LQ330_RS10440 PF02684 Lipid-A-disaccharide synthetase LQ330_RS10445 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LQ330_RS10445 PF00132 Bacterial transferase hexapeptide (six repeats) LQ330_RS10450 PF07977 FabA-like domain LQ330_RS10455 PF00132 Bacterial transferase hexapeptide (six repeats) LQ330_RS10455 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LQ330_RS10460 PF01103 Surface antigen LQ330_RS10460 PF07244 Surface antigen variable number repeat LQ330_RS10465 PF17820 PDZ domain LQ330_RS10465 PF02163 Peptidase family M50 LQ330_RS10470 PF13288 DXP reductoisomerase C-terminal domain LQ330_RS10470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LQ330_RS10470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LQ330_RS10480 PF01255 Putative undecaprenyl diphosphate synthase LQ330_RS10485 PF01765 Ribosome recycling factor LQ330_RS10490 PF00696 Amino acid kinase family LQ330_RS10495 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10500 PF00889 Elongation factor TS LQ330_RS10505 PF00318 Ribosomal protein S2 LQ330_RS10525 PF13953 PapC C-terminal domain LQ330_RS10525 PF13954 PapC N-terminal domain LQ330_RS10525 PF00577 Outer membrane usher protein LQ330_RS10540 PF00557 Metallopeptidase family M24 LQ330_RS10545 PF08335 GlnD PII-uridylyltransferase LQ330_RS10545 PF01966 HD domain LQ330_RS10545 PF01909 Nucleotidyltransferase domain LQ330_RS10550 PF00132 Bacterial transferase hexapeptide (six repeats) LQ330_RS10550 PF14602 Hexapeptide repeat of succinyl-transferase LQ330_RS10550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LQ330_RS10560 PF03960 ArsC family LQ330_RS10565 PF07687 Peptidase dimerisation domain LQ330_RS10565 PF01546 Peptidase family M20/M25/M40 LQ330_RS10570 PF00733 Asparagine synthase LQ330_RS10570 PF13537 Glutamine amidotransferase domain LQ330_RS10575 PF00999 Sodium/hydrogen exchanger family LQ330_RS10580 PF01804 Penicillin amidase LQ330_RS10585 PF00210 Ferritin-like domain LQ330_RS10590 PF00521 DNA gyrase/topoisomerase IV, subunit A LQ330_RS10590 PF03989 DNA gyrase C-terminal domain, beta-propeller LQ330_RS10595 PF12833 Helix-turn-helix domain LQ330_RS10605 PF02321 Outer membrane efflux protein LQ330_RS10610 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS10610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS10615 PF07690 Major Facilitator Superfamily LQ330_RS10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS10625 PF03466 LysR substrate binding domain LQ330_RS10645 PF00575 S1 RNA binding domain LQ330_RS10645 PF00773 RNB domain LQ330_RS10645 PF08461 Ribonuclease R winged-helix domain LQ330_RS10645 PF08206 Ribonuclease B OB domain LQ330_RS10645 PF17876 Cold shock domain LQ330_RS10655 PF00588 SpoU rRNA Methylase family LQ330_RS10655 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQ330_RS10660 PF02321 Outer membrane efflux protein LQ330_RS10665 PF00005 ABC transporter LQ330_RS10665 PF02687 FtsX-like permease family LQ330_RS10665 PF12704 MacB-like periplasmic core domain LQ330_RS10670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS10675 PF00072 Response regulator receiver domain LQ330_RS10675 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS10680 PF00672 HAMP domain LQ330_RS10680 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS10685 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10690 PF00929 Exonuclease LQ330_RS10695 PF07681 DoxX LQ330_RS10705 PF05114 Protein of unknown function (DUF692) LQ330_RS10715 PF01895 PhoU domain LQ330_RS10720 PF00005 ABC transporter LQ330_RS10725 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS10730 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS10735 PF12849 PBP superfamily domain LQ330_RS10740 PF12849 PBP superfamily domain LQ330_RS10750 PF00730 HhH-GPD superfamily base excision DNA repair protein LQ330_RS10750 PF10576 Iron-sulfur binding domain of endonuclease III LQ330_RS10750 PF00633 Helix-hairpin-helix motif LQ330_RS10760 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS10765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ330_RS10765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQ330_RS10770 PF00293 NUDIX domain LQ330_RS10775 PF00581 Rhodanese-like domain LQ330_RS10790 PF10672 S-adenosylmethionine-dependent methyltransferase LQ330_RS10790 PF02926 THUMP domain LQ330_RS10790 PF01170 Putative RNA methylase family UPF0020 LQ330_RS10810 PF04286 Protein of unknown function (DUF445) LQ330_RS10820 PF00202 Aminotransferase class-III LQ330_RS10825 PF00171 Aldehyde dehydrogenase family LQ330_RS10835 PF07690 Major Facilitator Superfamily LQ330_RS10835 PF00083 Sugar (and other) transporter LQ330_RS10840 PF01814 Hemerythrin HHE cation binding domain LQ330_RS10845 PF00072 Response regulator receiver domain LQ330_RS10845 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS10860 PF01266 FAD dependent oxidoreductase LQ330_RS10870 PF00120 Glutamine synthetase, catalytic domain LQ330_RS10875 PF13416 Bacterial extracellular solute-binding protein LQ330_RS10880 PF13533 Biotin-lipoyl like LQ330_RS10885 PF07690 Major Facilitator Superfamily LQ330_RS10890 PF02321 Outer membrane efflux protein LQ330_RS10895 PF08402 TOBE domain LQ330_RS10895 PF00005 ABC transporter LQ330_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS10905 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS10910 PF00171 Aldehyde dehydrogenase family LQ330_RS10925 PF03471 Transporter associated domain LQ330_RS10925 PF00571 CBS domain LQ330_RS10945 PF02130 Uncharacterized protein family UPF0054 LQ330_RS10950 PF02562 PhoH-like protein LQ330_RS10960 PF00005 ABC transporter LQ330_RS10970 PF00919 Uncharacterized protein family UPF0004 LQ330_RS10970 PF01938 TRAM domain LQ330_RS10970 PF04055 Radical SAM superfamily LQ330_RS10975 PF13417 Glutathione S-transferase, N-terminal domain LQ330_RS10985 PF01464 Transglycosylase SLT domain LQ330_RS10990 PF00355 Rieske [2Fe-2S] domain LQ330_RS10990 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LQ330_RS10995 PF00033 Cytochrome b/b6/petB LQ330_RS10995 PF00032 Cytochrome b(C-terminal)/b6/petD LQ330_RS11000 PF02167 Cytochrome C1 family LQ330_RS11005 PF00043 Glutathione S-transferase, C-terminal domain LQ330_RS11005 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS11010 PF04386 Stringent starvation protein B LQ330_RS11025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LQ330_RS11025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LQ330_RS11035 PF00731 AIR carboxylase LQ330_RS11040 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LQ330_RS11040 PF02222 ATP-grasp domain LQ330_RS11045 PF02627 Carboxymuconolactone decarboxylase family LQ330_RS11050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQ330_RS11050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQ330_RS11055 PF00462 Glutaredoxin LQ330_RS11065 PF00593 TonB dependent receptor LQ330_RS11070 PF11892 Domain of unknown function (DUF3412) LQ330_RS11070 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LQ330_RS11070 PF03641 Possible lysine decarboxylase LQ330_RS11075 PF00114 Pilin (bacterial filament) LQ330_RS11075 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS11095 PF05567 Neisseria PilC beta-propeller domain LQ330_RS11115 PF00271 Helicase conserved C-terminal domain LQ330_RS11115 PF04851 Type III restriction enzyme, res subunit LQ330_RS11115 PF12344 Ultra-violet resistance protein B LQ330_RS11115 PF02151 UvrB/uvrC motif LQ330_RS11115 PF17757 UvrB interaction domain LQ330_RS11145 PF00072 Response regulator receiver domain LQ330_RS11145 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS11150 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS11155 PF03772 Competence protein LQ330_RS11155 PF00753 Metallo-beta-lactamase superfamily LQ330_RS11155 PF13567 Domain of unknown function (DUF4131) LQ330_RS11160 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS11170 PF00664 ABC transporter transmembrane region LQ330_RS11170 PF00005 ABC transporter LQ330_RS11175 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LQ330_RS11180 PF02348 Cytidylyltransferase LQ330_RS11185 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQ330_RS11195 PF01541 GIY-YIG catalytic domain LQ330_RS11195 PF08459 UvrC Helix-hairpin-helix N-terminal LQ330_RS11195 PF02151 UvrB/uvrC motif LQ330_RS11200 PF01066 CDP-alcohol phosphatidyltransferase LQ330_RS11225 PF02321 Outer membrane efflux protein LQ330_RS11235 PF00005 ABC transporter LQ330_RS11235 PF12704 MacB-like periplasmic core domain LQ330_RS11235 PF02687 FtsX-like permease family LQ330_RS11270 PF03747 ADP-ribosylglycohydrolase LQ330_RS11290 PF12833 Helix-turn-helix domain LQ330_RS11290 PF02311 AraC-like ligand binding domain LQ330_RS11295 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LQ330_RS11315 PF13746 4Fe-4S dicluster domain LQ330_RS11315 PF12801 4Fe-4S binding domain LQ330_RS11315 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LQ330_RS11330 PF04055 Radical SAM superfamily LQ330_RS11330 PF06969 HemN C-terminal domain LQ330_RS11345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQ330_RS11345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQ330_RS11345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQ330_RS11350 PF01645 Conserved region in glutamate synthase LQ330_RS11355 PF13673 Acetyltransferase (GNAT) domain LQ330_RS11360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS11360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQ330_RS11365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ330_RS11375 PF17773 UPF0176 acylphosphatase like domain LQ330_RS11375 PF00581 Rhodanese-like domain LQ330_RS11380 PF00296 Luciferase-like monooxygenase LQ330_RS11395 PF03471 Transporter associated domain LQ330_RS11395 PF01595 Cyclin M transmembrane N-terminal domain LQ330_RS11395 PF00571 CBS domain LQ330_RS11405 PF01384 Phosphate transporter family LQ330_RS11415 PF13302 Acetyltransferase (GNAT) domain LQ330_RS11420 PF01751 Toprim domain LQ330_RS11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS11420 PF00204 DNA gyrase B LQ330_RS11420 PF00986 DNA gyrase B subunit, carboxyl terminus LQ330_RS11430 PF00117 Glutamine amidotransferase class-I LQ330_RS11430 PF06418 CTP synthase N-terminus LQ330_RS11435 PF00793 DAHP synthetase I family LQ330_RS11445 PF00113 Enolase, C-terminal TIM barrel domain LQ330_RS11445 PF03952 Enolase, N-terminal domain LQ330_RS11450 PF04977 Septum formation initiator LQ330_RS11455 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LQ330_RS11460 PF02542 YgbB family LQ330_RS11465 PF01142 tRNA pseudouridine synthase D (TruD) LQ330_RS11470 PF01713 Smr domain LQ330_RS11475 PF01975 Survival protein SurE LQ330_RS11490 PF01476 LysM domain LQ330_RS11490 PF01551 Peptidase family M23 LQ330_RS11500 PF04430 Protein of unknown function (DUF498/DUF598) LQ330_RS11505 PF01985 CRS1 / YhbY (CRM) domain LQ330_RS11510 PF01728 FtsJ-like methyltransferase LQ330_RS11515 PF01434 Peptidase family M41 LQ330_RS11515 PF06480 FtsH Extracellular LQ330_RS11515 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS11515 PF17862 AAA+ lid domain LQ330_RS11530 PF00809 Pterin binding enzyme LQ330_RS11540 PF17209 Hfq protein LQ330_RS11545 PF16360 GTP-binding GTPase Middle Region LQ330_RS11545 PF13167 GTP-binding GTPase N-terminal LQ330_RS11545 PF01926 50S ribosome-binding GTPase LQ330_RS11550 PF02464 Competence-damaged protein LQ330_RS11555 PF03109 ABC1 family LQ330_RS11560 PF01726 LexA DNA binding domain LQ330_RS11560 PF00717 Peptidase S24-like LQ330_RS11565 PF00154 recA bacterial DNA recombination protein LQ330_RS11570 PF02631 RecX family LQ330_RS11575 PF01411 tRNA synthetases class II (A) LQ330_RS11575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQ330_RS11575 PF02272 DHHA1 domain LQ330_RS11580 PF02599 Global regulator protein family LQ330_RS11600 PF00456 Transketolase, thiamine diphosphate binding domain LQ330_RS11600 PF17831 Pyruvate dehydrogenase E1 component middle domain LQ330_RS11625 PF09423 PhoD-like phosphatase LQ330_RS11625 PF16655 PhoD-like phosphatase, N-terminal domain LQ330_RS11630 PF04185 Phosphoesterase family LQ330_RS11630 PF05506 Domain of unknown function (DUF756) LQ330_RS11635 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS11635 PF00593 TonB dependent receptor LQ330_RS11640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQ330_RS11645 PF00034 Cytochrome c LQ330_RS11645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQ330_RS11655 PF07690 Major Facilitator Superfamily LQ330_RS11665 PF02678 Pirin LQ330_RS11665 PF17954 Quercetinase C-terminal cupin domain LQ330_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS11670 PF03466 LysR substrate binding domain LQ330_RS11695 PF08543 Phosphomethylpyrimidine kinase LQ330_RS11695 PF02581 Thiamine monophosphate synthase LQ330_RS11710 PF02562 PhoH-like protein LQ330_RS11710 PF13638 PIN domain LQ330_RS11715 PF00578 AhpC/TSA family LQ330_RS11725 PF00701 Dihydrodipicolinate synthetase family LQ330_RS11735 PF11953 Domain of unknown function (DUF3470) LQ330_RS11735 PF00037 4Fe-4S binding domain LQ330_RS11740 PF00083 Sugar (and other) transporter LQ330_RS11750 PF12627 Probable RNA and SrmB- binding site of polymerase A LQ330_RS11750 PF12626 Polymerase A arginine-rich C-terminus LQ330_RS11750 PF01743 Poly A polymerase head domain LQ330_RS11755 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQ330_RS11760 PF02548 Ketopantoate hydroxymethyltransferase LQ330_RS11765 PF02569 Pantoate-beta-alanine ligase LQ330_RS11775 PF02261 Aspartate decarboxylase LQ330_RS11780 PF00342 Phosphoglucose isomerase LQ330_RS11785 PF00072 Response regulator receiver domain LQ330_RS11785 PF02954 Bacterial regulatory protein, Fis family LQ330_RS11790 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS11795 PF04551 GcpE protein LQ330_RS11800 PF01569 PAP2 superfamily LQ330_RS11805 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS11805 PF00072 Response regulator receiver domain LQ330_RS11810 PF01081 KDPG and KHG aldolase LQ330_RS11815 PF00920 Dehydratase family LQ330_RS11820 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LQ330_RS11825 PF02685 Glucokinase LQ330_RS11830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LQ330_RS11830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LQ330_RS11835 PF03459 TOBE domain LQ330_RS11835 PF00005 ABC transporter LQ330_RS11835 PF17912 MalK OB fold domain LQ330_RS11850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQ330_RS11855 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQ330_RS11860 PF00890 FAD binding domain LQ330_RS11860 PF02910 Fumarate reductase flavoprotein C-term LQ330_RS11865 PF13085 2Fe-2S iron-sulfur cluster binding domain LQ330_RS11865 PF13237 4Fe-4S dicluster domain LQ330_RS11870 PF03937 Flavinator of succinate dehydrogenase LQ330_RS11880 PF02687 FtsX-like permease family LQ330_RS11880 PF12704 MacB-like periplasmic core domain LQ330_RS11885 PF00005 ABC transporter LQ330_RS11895 PF04362 Bacterial Fe(2+) trafficking LQ330_RS11900 PF14815 NUDIX domain LQ330_RS11900 PF00730 HhH-GPD superfamily base excision DNA repair protein LQ330_RS11900 PF00633 Helix-hairpin-helix motif LQ330_RS11900 PF10576 Iron-sulfur binding domain of endonuclease III LQ330_RS11905 PF00448 SRP54-type protein, GTPase domain LQ330_RS11905 PF02881 SRP54-type protein, helical bundle domain LQ330_RS11915 PF00183 Hsp90 protein LQ330_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS11925 PF01467 Cytidylyltransferase-like LQ330_RS11935 PF00037 4Fe-4S binding domain LQ330_RS11945 PF00753 Metallo-beta-lactamase superfamily LQ330_RS11975 PF00719 Inorganic pyrophosphatase LQ330_RS11980 PF03441 FAD binding domain of DNA photolyase LQ330_RS11980 PF00875 DNA photolyase LQ330_RS11985 PF00691 OmpA family LQ330_RS11985 PF13488 Glycine zipper LQ330_RS11990 PF00106 short chain dehydrogenase LQ330_RS11995 PF03466 LysR substrate binding domain LQ330_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS12000 PF03466 LysR substrate binding domain LQ330_RS12015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS12020 PF00873 AcrB/AcrD/AcrF family LQ330_RS12025 PF00106 short chain dehydrogenase LQ330_RS12030 PF02321 Outer membrane efflux protein LQ330_RS12080 PF12705 PD-(D/E)XK nuclease superfamily LQ330_RS12080 PF00580 UvrD/REP helicase N-terminal domain LQ330_RS12080 PF13361 UvrD-like helicase C-terminal domain LQ330_RS12085 PF13175 AAA ATPase domain LQ330_RS12210 PF03389 MobA/MobL family LQ330_RS12230 PF00583 Acetyltransferase (GNAT) family LQ330_RS12235 PF01668 SmpB protein LQ330_RS12240 PF03364 Polyketide cyclase / dehydrase and lipid transport LQ330_RS12245 PF03658 RnfH family Ubiquitin LQ330_RS12250 PF04355 SmpA / OmlA family LQ330_RS12255 PF01475 Ferric uptake regulator family LQ330_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS12265 PF03466 LysR substrate binding domain LQ330_RS12270 PF02463 RecF/RecN/SMC N terminal domain LQ330_RS12275 PF01628 HrcA protein C terminal domain LQ330_RS12275 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LQ330_RS12280 PF01025 GrpE LQ330_RS12285 PF00012 Hsp70 protein LQ330_RS12290 PF00226 DnaJ domain LQ330_RS12290 PF00684 DnaJ central domain LQ330_RS12290 PF01556 DnaJ C terminal domain LQ330_RS12295 PF02311 AraC-like ligand binding domain LQ330_RS12295 PF12833 Helix-turn-helix domain LQ330_RS12300 PF07690 Major Facilitator Superfamily LQ330_RS12305 PF08543 Phosphomethylpyrimidine kinase LQ330_RS12320 PF00664 ABC transporter transmembrane region LQ330_RS12320 PF00005 ABC transporter LQ330_RS12325 PF01205 Uncharacterized protein family UPF0029 LQ330_RS12335 PF04542 Sigma-70 region 2 LQ330_RS12335 PF04545 Sigma-70, region 4 LQ330_RS12340 PF08447 PAS fold LQ330_RS12340 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS12340 PF08448 PAS fold LQ330_RS12340 PF00563 EAL domain LQ330_RS12345 PF03641 Possible lysine decarboxylase LQ330_RS12350 PF00202 Aminotransferase class-III LQ330_RS12355 PF02547 Queuosine biosynthesis protein LQ330_RS12360 PF01702 Queuine tRNA-ribosyltransferase LQ330_RS12365 PF02699 Preprotein translocase subunit LQ330_RS12370 PF07549 SecD/SecF GG Motif LQ330_RS12370 PF02355 Protein export membrane protein LQ330_RS12370 PF13721 SecD export protein N-terminal TM region LQ330_RS12375 PF07549 SecD/SecF GG Motif LQ330_RS12375 PF02355 Protein export membrane protein LQ330_RS12380 PF07055 Enoyl reductase FAD binding domain LQ330_RS12380 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LQ330_RS12380 PF12241 Trans-2-enoyl-CoA reductase catalytic region LQ330_RS12385 PF00563 EAL domain LQ330_RS12385 PF00072 Response regulator receiver domain LQ330_RS12385 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS12395 PF07152 YaeQ protein LQ330_RS12400 PF00849 RNA pseudouridylate synthase LQ330_RS12405 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LQ330_RS12410 PF00313 'Cold-shock' DNA-binding domain LQ330_RS12415 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS12420 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LQ330_RS12425 PF05048 Periplasmic copper-binding protein (NosD) LQ330_RS12430 PF04966 Carbohydrate-selective porin, OprB family LQ330_RS12435 PF01487 Type I 3-dehydroquinase LQ330_RS12440 PF07690 Major Facilitator Superfamily LQ330_RS12445 PF01144 Coenzyme A transferase LQ330_RS12450 PF01144 Coenzyme A transferase LQ330_RS12455 PF00108 Thiolase, N-terminal domain LQ330_RS12455 PF02803 Thiolase, C-terminal domain LQ330_RS12460 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LQ330_RS12460 PF00775 Dioxygenase LQ330_RS12465 PF00775 Dioxygenase LQ330_RS12470 PF10397 Adenylosuccinate lyase C-terminus LQ330_RS12470 PF00206 Lyase LQ330_RS12475 PF12146 Serine aminopeptidase, S33 LQ330_RS12480 PF02627 Carboxymuconolactone decarboxylase family LQ330_RS12485 PF09339 IclR helix-turn-helix domain LQ330_RS12485 PF01614 Bacterial transcriptional regulator LQ330_RS12490 PF01011 PQQ enzyme repeat LQ330_RS12495 PF00156 Phosphoribosyl transferase domain LQ330_RS12500 PF00271 Helicase conserved C-terminal domain LQ330_RS12500 PF03880 DbpA RNA binding domain LQ330_RS12500 PF00270 DEAD/DEAH box helicase LQ330_RS12505 PF03601 Conserved hypothetical protein 698 LQ330_RS12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS12510 PF03466 LysR substrate binding domain LQ330_RS12515 PF00005 ABC transporter LQ330_RS12515 PF12848 ABC transporter LQ330_RS12515 PF16326 ABC transporter C-terminal domain LQ330_RS12520 PF00034 Cytochrome c LQ330_RS12530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS12535 PF00873 AcrB/AcrD/AcrF family LQ330_RS12540 PF00873 AcrB/AcrD/AcrF family LQ330_RS12555 PF00795 Carbon-nitrogen hydrolase LQ330_RS12560 PF04371 Porphyromonas-type peptidyl-arginine deiminase LQ330_RS12570 PF00444 Ribosomal protein L36 LQ330_RS12575 PF02224 Cytidylate kinase LQ330_RS12580 PF00575 S1 RNA binding domain LQ330_RS12585 PF00216 Bacterial DNA-binding protein LQ330_RS12595 PF18073 Rubredoxin metal binding domain LQ330_RS12600 PF00953 Glycosyl transferase family 4 LQ330_RS12605 PF02719 Polysaccharide biosynthesis protein LQ330_RS12610 PF00483 Nucleotidyl transferase LQ330_RS12615 PF02803 Thiolase, C-terminal domain LQ330_RS12615 PF00108 Thiolase, N-terminal domain LQ330_RS12620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQ330_RS12620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQ330_RS12620 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS12630 PF00334 Nucleoside diphosphate kinase LQ330_RS12635 PF04055 Radical SAM superfamily LQ330_RS12645 PF13464 Domain of unknown function (DUF4115) LQ330_RS12645 PF13464 Domain of unknown function (DUF4115) LQ330_RS12650 PF09976 Tetratricopeptide repeat-like domain LQ330_RS12655 PF01011 PQQ enzyme repeat LQ330_RS12655 PF13360 PQQ-like domain LQ330_RS12660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LQ330_RS12660 PF01926 50S ribosome-binding GTPase LQ330_RS12665 PF00899 ThiF family LQ330_RS12670 PF00999 Sodium/hydrogen exchanger family LQ330_RS12670 PF02254 TrkA-N domain LQ330_RS12675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LQ330_RS12675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LQ330_RS12680 PF00571 CBS domain LQ330_RS12680 PF00478 IMP dehydrogenase / GMP reductase domain LQ330_RS12685 PF00958 GMP synthase C terminal domain LQ330_RS12685 PF02540 NAD synthase LQ330_RS12685 PF00117 Glutamine amidotransferase class-I LQ330_RS12695 PF13476 AAA domain LQ330_RS12705 PF04471 Restriction endonuclease LQ330_RS12705 PF14338 Mrr N-terminal domain LQ330_RS12715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS12715 PF03466 LysR substrate binding domain LQ330_RS12730 PF00106 short chain dehydrogenase LQ330_RS12745 PF12697 Alpha/beta hydrolase family LQ330_RS12760 PF01022 Bacterial regulatory protein, arsR family LQ330_RS12775 PF01494 FAD binding domain LQ330_RS12800 PF01965 DJ-1/PfpI family LQ330_RS12805 PF00593 TonB dependent receptor LQ330_RS12805 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS12810 PF03358 NADPH-dependent FMN reductase LQ330_RS12820 PF00296 Luciferase-like monooxygenase LQ330_RS12825 PF00296 Luciferase-like monooxygenase LQ330_RS12830 PF07687 Peptidase dimerisation domain LQ330_RS12830 PF01546 Peptidase family M20/M25/M40 LQ330_RS12835 PF00583 Acetyltransferase (GNAT) family LQ330_RS12850 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQ330_RS12865 PF12706 Beta-lactamase superfamily domain LQ330_RS12870 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS12870 PF08361 MAATS-type transcriptional repressor, C-terminal region LQ330_RS12875 PF12792 CSS motif domain associated with EAL LQ330_RS12875 PF00563 EAL domain LQ330_RS12880 PF01636 Phosphotransferase enzyme family LQ330_RS12885 PF17932 Tetracyclin repressor-like, C-terminal domain LQ330_RS12885 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS12900 PF00892 EamA-like transporter family LQ330_RS12905 PF01565 FAD binding domain LQ330_RS12905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LQ330_RS12910 PF01180 Dihydroorotate dehydrogenase LQ330_RS12930 PF00171 Aldehyde dehydrogenase family LQ330_RS12945 PF00583 Acetyltransferase (GNAT) family LQ330_RS12950 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS12950 PF00072 Response regulator receiver domain LQ330_RS12955 PF00072 Response regulator receiver domain LQ330_RS12955 PF13426 PAS domain LQ330_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS12960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQ330_RS12960 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS12960 PF00072 Response regulator receiver domain LQ330_RS12960 PF01627 Hpt domain LQ330_RS12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS12960 PF00672 HAMP domain LQ330_RS12965 PF01739 CheR methyltransferase, SAM binding domain LQ330_RS12965 PF03705 CheR methyltransferase, all-alpha domain LQ330_RS12970 PF01339 CheB methylesterase LQ330_RS12975 PF00072 Response regulator receiver domain LQ330_RS12975 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS12980 PF00563 EAL domain LQ330_RS12980 PF04940 Sensors of blue-light using FAD LQ330_RS13015 PF00696 Amino acid kinase family LQ330_RS13015 PF13840 ACT domain LQ330_RS13015 PF01842 ACT domain LQ330_RS13015 PF00742 Homoserine dehydrogenase LQ330_RS13015 PF03447 Homoserine dehydrogenase, NAD binding domain LQ330_RS13020 PF08544 GHMP kinases C terminal LQ330_RS13020 PF00288 GHMP kinases N terminal domain LQ330_RS13025 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS13025 PF14821 Threonine synthase N terminus LQ330_RS13030 PF00027 Cyclic nucleotide-binding domain LQ330_RS13030 PF13545 Crp-like helix-turn-helix domain LQ330_RS13035 PF03129 Anticodon binding domain LQ330_RS13035 PF13393 Histidyl-tRNA synthetase LQ330_RS13050 PF08029 HisG, C-terminal domain LQ330_RS13050 PF01634 ATP phosphoribosyltransferase LQ330_RS13055 PF00815 Histidinol dehydrogenase LQ330_RS13060 PF00155 Aminotransferase class I and II LQ330_RS13065 PF00475 Imidazoleglycerol-phosphate dehydratase LQ330_RS13065 PF08645 Polynucleotide kinase 3 phosphatase LQ330_RS13070 PF00117 Glutamine amidotransferase class-I LQ330_RS13075 PF00977 Histidine biosynthesis protein LQ330_RS13080 PF00977 Histidine biosynthesis protein LQ330_RS13085 PF01502 Phosphoribosyl-AMP cyclohydrolase LQ330_RS13085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LQ330_RS13100 PF02685 Glucokinase LQ330_RS13105 PF01112 Asparaginase LQ330_RS13110 PF03932 CutC family LQ330_RS13120 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS13120 PF00593 TonB dependent receptor LQ330_RS13125 PF00403 Heavy-metal-associated domain LQ330_RS13130 PF09278 MerR, DNA binding LQ330_RS13130 PF00376 MerR family regulatory protein LQ330_RS13145 PF07971 Glycosyl hydrolase family 92 LQ330_RS13145 PF17678 Glycosyl hydrolase family 92 N-terminal domain LQ330_RS13150 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS13155 PF07690 Major Facilitator Superfamily LQ330_RS13160 PF00294 pfkB family carbohydrate kinase LQ330_RS13180 PF03079 ARD/ARD' family LQ330_RS13185 PF00596 Class II Aldolase and Adducin N-terminal domain LQ330_RS13190 PF13520 Amino acid permease LQ330_RS13195 PF13520 Amino acid permease LQ330_RS13205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQ330_RS13205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQ330_RS13210 PF02913 FAD linked oxidases, C-terminal domain LQ330_RS13210 PF01565 FAD binding domain LQ330_RS13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13225 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS13225 PF00672 HAMP domain LQ330_RS13230 PF00072 Response regulator receiver domain LQ330_RS13230 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS13235 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS13235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS13240 PF00873 AcrB/AcrD/AcrF family LQ330_RS13255 PF09285 Elongation factor P, C-terminal LQ330_RS13255 PF08207 Elongation factor P (EF-P) KOW-like domain LQ330_RS13255 PF01132 Elongation factor P (EF-P) OB domain LQ330_RS13260 PF00106 short chain dehydrogenase LQ330_RS13265 PF00682 HMGL-like LQ330_RS13275 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS13285 PF07670 Nucleoside recognition LQ330_RS13285 PF02421 Ferrous iron transport protein B LQ330_RS13285 PF07664 Ferrous iron transport protein B C terminus LQ330_RS13300 PF05173 Dihydrodipicolinate reductase, C-terminus LQ330_RS13300 PF01113 Dihydrodipicolinate reductase, N-terminus LQ330_RS13305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LQ330_RS13305 PF00117 Glutamine amidotransferase class-I LQ330_RS13310 PF02142 MGS-like domain LQ330_RS13310 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LQ330_RS13310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQ330_RS13315 PF03449 Transcription elongation factor, N-terminal LQ330_RS13315 PF01272 Transcription elongation factor, GreA/GreB, C-term LQ330_RS13330 PF01368 DHH family LQ330_RS13330 PF02272 DHHA1 domain LQ330_RS13330 PF17768 RecJ OB domain LQ330_RS13335 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) LQ330_RS13340 PF03462 PCRF domain LQ330_RS13340 PF00472 RF-1 domain LQ330_RS13355 PF00171 Aldehyde dehydrogenase family LQ330_RS13360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQ330_RS13360 PF00205 Thiamine pyrophosphate enzyme, central domain LQ330_RS13360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQ330_RS13365 PF00152 tRNA synthetases class II (D, K and N) LQ330_RS13365 PF01336 OB-fold nucleic acid binding domain LQ330_RS13370 PF00072 Response regulator receiver domain LQ330_RS13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13375 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS13375 PF01627 Hpt domain LQ330_RS13375 PF00072 Response regulator receiver domain LQ330_RS13380 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS13385 PF00501 AMP-binding enzyme LQ330_RS13385 PF13193 AMP-binding enzyme C-terminal domain LQ330_RS13390 PF05199 GMC oxidoreductase LQ330_RS13390 PF00732 GMC oxidoreductase LQ330_RS13395 PF00171 Aldehyde dehydrogenase family LQ330_RS13400 PF13977 BetI-type transcriptional repressor, C-terminal LQ330_RS13400 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS13405 PF02028 BCCT, betaine/carnitine/choline family transporter LQ330_RS13410 PF00694 Aconitase C-terminal domain LQ330_RS13410 PF00330 Aconitase family (aconitate hydratase) LQ330_RS13425 PF00330 Aconitase family (aconitate hydratase) LQ330_RS13425 PF06434 Aconitate hydratase 2 N-terminus LQ330_RS13425 PF11791 Aconitate B N-terminal domain LQ330_RS13440 PF01339 CheB methylesterase LQ330_RS13440 PF00072 Response regulator receiver domain LQ330_RS13445 PF03975 CheD chemotactic sensory transduction LQ330_RS13450 PF03705 CheR methyltransferase, all-alpha domain LQ330_RS13450 PF01739 CheR methyltransferase, SAM binding domain LQ330_RS13455 PF00672 HAMP domain LQ330_RS13455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS13455 PF02203 Tar ligand binding domain homologue LQ330_RS13460 PF00672 HAMP domain LQ330_RS13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS13460 PF02203 Tar ligand binding domain homologue LQ330_RS13470 PF01584 CheW-like domain LQ330_RS13480 PF07238 PilZ domain LQ330_RS13480 PF07317 Flagellar regulator YcgR LQ330_RS13485 PF02203 Tar ligand binding domain homologue LQ330_RS13485 PF00672 HAMP domain LQ330_RS13485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS13490 PF01584 CheW-like domain LQ330_RS13490 PF09078 CheY binding LQ330_RS13490 PF02895 Signal transducing histidine kinase, homodimeric domain LQ330_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13490 PF01627 Hpt domain LQ330_RS13495 PF00072 Response regulator receiver domain LQ330_RS13505 PF01584 CheW-like domain LQ330_RS13510 PF13614 AAA domain LQ330_RS13515 PF00691 OmpA family LQ330_RS13515 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQ330_RS13520 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS13525 PF01627 Hpt domain LQ330_RS13525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13525 PF00072 Response regulator receiver domain LQ330_RS13525 PF01584 CheW-like domain LQ330_RS13525 PF02895 Signal transducing histidine kinase, homodimeric domain LQ330_RS13530 PF04344 Chemotaxis phosphatase, CheZ LQ330_RS13535 PF00072 Response regulator receiver domain LQ330_RS13540 PF04545 Sigma-70, region 4 LQ330_RS13540 PF04539 Sigma-70 region 3 LQ330_RS13540 PF04542 Sigma-70 region 2 LQ330_RS13545 PF10609 NUBPL iron-transfer P-loop NTPase LQ330_RS13550 PF00448 SRP54-type protein, GTPase domain LQ330_RS13555 PF00771 FHIPEP family LQ330_RS13560 PF01312 FlhB HrpN YscU SpaS Family LQ330_RS13565 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS13565 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS13565 PF00563 EAL domain LQ330_RS13570 PF01311 Bacterial export proteins, family 1 LQ330_RS13575 PF01313 Bacterial export proteins, family 3 LQ330_RS13580 PF00813 FliP family LQ330_RS13585 PF04347 Flagellar biosynthesis protein, FliO LQ330_RS13590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQ330_RS13595 PF02154 Flagellar motor switch protein FliM LQ330_RS13595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQ330_RS13615 PF18269 T3SS EscN ATPase C-terminal domain LQ330_RS13615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ330_RS13625 PF14842 FliG N-terminal domain LQ330_RS13625 PF14841 FliG middle domain LQ330_RS13625 PF01706 FliG C-terminal domain LQ330_RS13630 PF01514 Secretory protein of YscJ/FliF family LQ330_RS13630 PF08345 Flagellar M-ring protein C-terminal LQ330_RS13635 PF02049 Flagellar hook-basal body complex protein FliE LQ330_RS13650 PF06490 Flagellar regulatory protein FleQ LQ330_RS13650 PF02954 Bacterial regulatory protein, Fis family LQ330_RS13650 PF00158 Sigma-54 interaction domain LQ330_RS13655 PF00072 Response regulator receiver domain LQ330_RS13655 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS13660 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQ330_RS13660 PF04963 Sigma-54 factor, core binding domain LQ330_RS13660 PF04552 Sigma-54, DNA binding domain LQ330_RS13665 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS13665 PF00072 Response regulator receiver domain LQ330_RS13680 PF02561 Flagellar protein FliS LQ330_RS13685 PF07195 Flagellar hook-associated protein 2 C-terminus LQ330_RS13685 PF02465 Flagellar hook-associated protein 2 N-terminus LQ330_RS13690 PF00669 Bacterial flagellin N-terminal helical region LQ330_RS13690 PF00700 Bacterial flagellin C-terminal helical region LQ330_RS13695 PF00700 Bacterial flagellin C-terminal helical region LQ330_RS13695 PF00669 Bacterial flagellin N-terminal helical region LQ330_RS13700 PF00700 Bacterial flagellin C-terminal helical region LQ330_RS13700 PF00669 Bacterial flagellin N-terminal helical region LQ330_RS13710 PF00460 Flagella basal body rod protein LQ330_RS13710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ330_RS13715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LQ330_RS13715 PF10135 Rod binding protein LQ330_RS13720 PF02119 Flagellar P-ring protein LQ330_RS13725 PF02107 Flagellar L-ring protein LQ330_RS13730 PF00460 Flagella basal body rod protein LQ330_RS13730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ330_RS13735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ330_RS13735 PF00460 Flagella basal body rod protein LQ330_RS13740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ330_RS13740 PF00460 Flagella basal body rod protein LQ330_RS13740 PF07559 Flagellar basal body protein FlaE LQ330_RS13750 PF00460 Flagella basal body rod protein LQ330_RS13750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ330_RS13755 PF00460 Flagella basal body rod protein LQ330_RS13760 PF01584 CheW-like domain LQ330_RS13760 PF00072 Response regulator receiver domain LQ330_RS13780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13780 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS13780 PF00989 PAS fold LQ330_RS13780 PF13188 PAS domain LQ330_RS13780 PF13426 PAS domain LQ330_RS13785 PF00563 EAL domain LQ330_RS13785 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS13785 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS13790 PF07730 Histidine kinase LQ330_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13795 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS13795 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS13795 PF00563 EAL domain LQ330_RS13810 PF00672 HAMP domain LQ330_RS13810 PF12729 Four helix bundle sensory module for signal transduction LQ330_RS13810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS13815 PF04356 Protein of unknown function (DUF489) LQ330_RS13825 PF00293 NUDIX domain LQ330_RS13835 PF02617 ATP-dependent Clp protease adaptor protein ClpS LQ330_RS13840 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LQ330_RS13845 PF02861 Clp amino terminal domain, pathogenicity island component LQ330_RS13845 PF17871 AAA lid domain LQ330_RS13845 PF07724 AAA domain (Cdc48 subfamily) LQ330_RS13845 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS13845 PF10431 C-terminal, D2-small domain, of ClpB protein LQ330_RS13850 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LQ330_RS13855 PF01381 Helix-turn-helix LQ330_RS13865 PF01176 Translation initiation factor 1A / IF-1 LQ330_RS13870 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LQ330_RS13880 PF01520 N-acetylmuramoyl-L-alanine amidase LQ330_RS13880 PF08239 Bacterial SH3 domain LQ330_RS13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS13890 PF17854 FtsK alpha domain LQ330_RS13890 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LQ330_RS13890 PF09397 Ftsk gamma domain LQ330_RS13890 PF01580 FtsK/SpoIIIE family LQ330_RS13900 PF03548 Outer membrane lipoprotein carrier protein LolA LQ330_RS13910 PF12002 MgsA AAA+ ATPase C terminal LQ330_RS13910 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS13910 PF16193 AAA C-terminal domain LQ330_RS13925 PF00756 Putative esterase LQ330_RS13935 PF01497 Periplasmic binding protein LQ330_RS13940 PF01032 FecCD transport family LQ330_RS13945 PF00005 ABC transporter LQ330_RS13955 PF00679 Elongation factor G C-terminus LQ330_RS13955 PF14492 Elongation Factor G, domain II LQ330_RS13955 PF03764 Elongation factor G, domain IV LQ330_RS13955 PF00009 Elongation factor Tu GTP binding domain LQ330_RS13955 PF03144 Elongation factor Tu domain 2 LQ330_RS13970 PF01627 Hpt domain LQ330_RS13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS13970 PF00672 HAMP domain LQ330_RS13970 PF00072 Response regulator receiver domain LQ330_RS13970 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS13975 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS13975 PF00072 Response regulator receiver domain LQ330_RS14010 PF01593 Flavin containing amine oxidoreductase LQ330_RS14025 PF04542 Sigma-70 region 2 LQ330_RS14025 PF08281 Sigma-70, region 4 LQ330_RS14040 PF08448 PAS fold LQ330_RS14040 PF13188 PAS domain LQ330_RS14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS14040 PF00072 Response regulator receiver domain LQ330_RS14040 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS14045 PF00072 Response regulator receiver domain LQ330_RS14050 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS14050 PF01590 GAF domain LQ330_RS14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS14050 PF08446 PAS fold LQ330_RS14050 PF00360 Phytochrome region LQ330_RS14060 PF03073 TspO/MBR family LQ330_RS14075 PF14864 Alkyl sulfatase C-terminal LQ330_RS14075 PF14863 Alkyl sulfatase dimerisation LQ330_RS14075 PF00753 Metallo-beta-lactamase superfamily LQ330_RS14160 PF00376 MerR family regulatory protein LQ330_RS14160 PF09278 MerR, DNA binding LQ330_RS14165 PF02411 MerT mercuric transport protein LQ330_RS14170 PF00403 Heavy-metal-associated domain LQ330_RS14175 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS14175 PF00403 Heavy-metal-associated domain LQ330_RS14175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ330_RS14180 PF05052 MerE protein LQ330_RS14190 PF11809 Domain of unknown function (DUF3330) LQ330_RS14190 PF00563 EAL domain LQ330_RS14195 PF02796 Helix-turn-helix domain of resolvase LQ330_RS14195 PF00239 Resolvase, N terminal domain LQ330_RS14200 PF01526 Tn3 transposase DDE domain LQ330_RS14200 PF13700 Domain of unknown function (DUF4158) LQ330_RS14270 PF00873 AcrB/AcrD/AcrF family LQ330_RS14285 PF00491 Arginase family LQ330_RS14300 PF04945 YHS domain LQ330_RS14305 PF05425 Copper resistance protein D LQ330_RS14335 PF05275 Copper resistance protein B precursor (CopB) LQ330_RS14340 PF00394 Multicopper oxidase LQ330_RS14340 PF07731 Multicopper oxidase LQ330_RS14340 PF07732 Multicopper oxidase LQ330_RS14365 PF13175 AAA ATPase domain LQ330_RS14380 PF00873 AcrB/AcrD/AcrF family LQ330_RS14385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS14385 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS14405 PF03239 Iron permease FTR1 family LQ330_RS14410 PF00376 MerR family regulatory protein LQ330_RS14410 PF09278 MerR, DNA binding LQ330_RS14420 PF13700 Domain of unknown function (DUF4158) LQ330_RS14420 PF01526 Tn3 transposase DDE domain LQ330_RS14460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS14475 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS14590 PF12804 MobA-like NTP transferase domain LQ330_RS14595 PF13478 XdhC Rossmann domain LQ330_RS14595 PF02625 XdhC and CoxI family LQ330_RS14600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQ330_RS14600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LQ330_RS14605 PF03450 CO dehydrogenase flavoprotein C-terminal domain LQ330_RS14605 PF00941 FAD binding domain in molybdopterin dehydrogenase LQ330_RS14610 PF00111 2Fe-2S iron-sulfur cluster binding domain LQ330_RS14610 PF10518 TAT (twin-arginine translocation) pathway signal sequence LQ330_RS14610 PF01799 [2Fe-2S] binding domain LQ330_RS14615 PF03466 LysR substrate binding domain LQ330_RS14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS14630 PF07690 Major Facilitator Superfamily LQ330_RS14635 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LQ330_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS14640 PF03466 LysR substrate binding domain LQ330_RS14675 PF00561 alpha/beta hydrolase fold LQ330_RS14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS14680 PF01590 GAF domain LQ330_RS14680 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS14680 PF08446 PAS fold LQ330_RS14680 PF00360 Phytochrome region LQ330_RS14685 PF12951 Passenger-associated-transport-repeat LQ330_RS14695 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS14695 PF00072 Response regulator receiver domain LQ330_RS14700 PF00072 Response regulator receiver domain LQ330_RS14700 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS14705 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ330_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS14705 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS14705 PF00072 Response regulator receiver domain LQ330_RS14710 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS14710 PF00072 Response regulator receiver domain LQ330_RS14710 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ330_RS14745 PF13954 PapC N-terminal domain LQ330_RS14745 PF13953 PapC C-terminal domain LQ330_RS14745 PF00577 Outer membrane usher protein LQ330_RS14750 PF02753 Pili assembly chaperone PapD, C-terminal domain LQ330_RS14750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LQ330_RS14760 PF01965 DJ-1/PfpI family LQ330_RS14765 PF00106 short chain dehydrogenase LQ330_RS14770 PF17755 UvrA DNA-binding domain LQ330_RS14785 PF00355 Rieske [2Fe-2S] domain LQ330_RS14800 PF04679 ATP dependent DNA ligase C terminal region LQ330_RS14800 PF01068 ATP dependent DNA ligase domain LQ330_RS14800 PF13298 DNA polymerase Ligase (LigD) LQ330_RS14810 PF05974 Domain of unknown function (DUF892) LQ330_RS14815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQ330_RS14815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQ330_RS14835 PF05067 Manganese containing catalase LQ330_RS14840 PF05974 Domain of unknown function (DUF892) LQ330_RS14870 PF00398 Ribosomal RNA adenine dimethylase LQ330_RS14890 PF00107 Zinc-binding dehydrogenase LQ330_RS14890 PF13823 Alcohol dehydrogenase GroES-associated LQ330_RS14890 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS14920 PF04616 Glycosyl hydrolases family 43 LQ330_RS14930 PF07691 PA14 domain LQ330_RS14930 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ330_RS14930 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ330_RS14930 PF14310 Fibronectin type III-like domain LQ330_RS14935 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LQ330_RS14935 PF04616 Glycosyl hydrolases family 43 LQ330_RS14945 PF07477 Glycosyl hydrolase family 67 C-terminus LQ330_RS14945 PF03648 Glycosyl hydrolase family 67 N-terminus LQ330_RS14945 PF07488 Glycosyl hydrolase family 67 middle domain LQ330_RS14950 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS14955 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ330_RS14955 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ330_RS14955 PF14310 Fibronectin type III-like domain LQ330_RS14960 PF00083 Sugar (and other) transporter LQ330_RS14970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQ330_RS14970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQ330_RS14975 PF04820 Tryptophan halogenase LQ330_RS14995 PF04397 LytTr DNA-binding domain LQ330_RS14995 PF00072 Response regulator receiver domain LQ330_RS15010 PF03600 Citrate transporter LQ330_RS15020 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS15025 PF00005 ABC transporter LQ330_RS15035 PF04303 PrpF protein LQ330_RS15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS15040 PF03466 LysR substrate binding domain LQ330_RS15065 PF02219 Methylenetetrahydrofolate reductase LQ330_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS15070 PF03466 LysR substrate binding domain LQ330_RS15075 PF03358 NADPH-dependent FMN reductase LQ330_RS15085 PF01717 Cobalamin-independent synthase, Catalytic domain LQ330_RS15085 PF08267 Cobalamin-independent synthase, N-terminal domain LQ330_RS15095 PF07729 FCD domain LQ330_RS15095 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS15110 PF14592 Chondroitinase B LQ330_RS15115 PF05426 Alginate lyase LQ330_RS15115 PF07940 Heparinase II/III-like protein LQ330_RS15120 PF07690 Major Facilitator Superfamily LQ330_RS15135 PF00294 pfkB family carbohydrate kinase LQ330_RS15160 PF13419 Haloacid dehalogenase-like hydrolase LQ330_RS15180 PF03466 LysR substrate binding domain LQ330_RS15180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS15205 PF02954 Bacterial regulatory protein, Fis family LQ330_RS15205 PF00072 Response regulator receiver domain LQ330_RS15205 PF00158 Sigma-54 interaction domain LQ330_RS15240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQ330_RS15240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQ330_RS15270 PF02245 Methylpurine-DNA glycosylase (MPG) LQ330_RS15280 PF00563 EAL domain LQ330_RS15280 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS15280 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS15280 PF13188 PAS domain LQ330_RS15285 PF03372 Endonuclease/Exonuclease/phosphatase family LQ330_RS15290 PF00128 Alpha amylase, catalytic domain LQ330_RS15290 PF16657 Maltogenic Amylase, C-terminal domain LQ330_RS15295 PF00296 Luciferase-like monooxygenase LQ330_RS15315 PF12704 MacB-like periplasmic core domain LQ330_RS15315 PF02687 FtsX-like permease family LQ330_RS15315 PF00005 ABC transporter LQ330_RS15320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS15330 PF00072 Response regulator receiver domain LQ330_RS15330 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS15335 PF00672 HAMP domain LQ330_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS15335 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS15340 PF06224 Winged helix DNA-binding domain LQ330_RS15355 PF00561 alpha/beta hydrolase fold LQ330_RS15360 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS15360 PF00672 HAMP domain LQ330_RS15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS15365 PF00072 Response regulator receiver domain LQ330_RS15365 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS15370 PF00873 AcrB/AcrD/AcrF family LQ330_RS15375 PF13533 Biotin-lipoyl like LQ330_RS15390 PF00690 Cation transporter/ATPase, N-terminus LQ330_RS15390 PF00689 Cation transporting ATPase, C-terminus LQ330_RS15395 PF02308 MgtC family LQ330_RS15400 PF00989 PAS fold LQ330_RS15400 PF13426 PAS domain LQ330_RS15400 PF08447 PAS fold LQ330_RS15400 PF13493 Domain of unknown function (DUF4118) LQ330_RS15400 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS15405 PF00072 Response regulator receiver domain LQ330_RS15405 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS15415 PF00892 EamA-like transporter family LQ330_RS15435 PF06772 Bacterial low temperature requirement A protein (LtrA) LQ330_RS15445 PF00753 Metallo-beta-lactamase superfamily LQ330_RS15455 PF00384 Molybdopterin oxidoreductase LQ330_RS15460 PF02634 FdhD/NarQ family LQ330_RS15480 PF07690 Major Facilitator Superfamily LQ330_RS15505 PF00005 ABC transporter LQ330_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS15520 PF03466 LysR substrate binding domain LQ330_RS15525 PF00248 Aldo/keto reductase family LQ330_RS15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS15545 PF03466 LysR substrate binding domain LQ330_RS15555 PF00873 AcrB/AcrD/AcrF family LQ330_RS15570 PF00072 Response regulator receiver domain LQ330_RS15570 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS15575 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS15580 PF07971 Glycosyl hydrolase family 92 LQ330_RS15580 PF17678 Glycosyl hydrolase family 92 N-terminal domain LQ330_RS15605 PF08946 Osmosensory transporter coiled coil LQ330_RS15605 PF00083 Sugar (and other) transporter LQ330_RS15620 PF13581 Histidine kinase-like ATPase domain LQ330_RS15620 PF07536 HWE histidine kinase LQ330_RS15620 PF13426 PAS domain LQ330_RS15640 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS15640 PF07660 Secretin and TonB N terminus short domain LQ330_RS15640 PF00593 TonB dependent receptor LQ330_RS15655 PF03466 LysR substrate binding domain LQ330_RS15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS15660 PF05726 Pirin C-terminal cupin domain LQ330_RS15660 PF02678 Pirin LQ330_RS15665 PF00857 Isochorismatase family LQ330_RS15690 PF02472 Biopolymer transport protein ExbD/TolR LQ330_RS15695 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS15715 PF12019 Type II transport protein GspH LQ330_RS15715 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS15720 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS15720 PF02501 Type II secretion system (T2SS), protein I LQ330_RS15740 PF12849 PBP superfamily domain LQ330_RS15745 PF00482 Type II secretion system (T2SS), protein F LQ330_RS15750 PF00437 Type II/IV secretion system protein LQ330_RS15755 PF03958 Bacterial type II/III secretion system short domain LQ330_RS15755 PF00263 Bacterial type II and III secretion system protein LQ330_RS15775 PF08334 Type II secretion system (T2SS), protein G LQ330_RS15775 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS15805 PF01037 Lrp/AsnC ligand binding domain LQ330_RS15820 PF00128 Alpha amylase, catalytic domain LQ330_RS15820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQ330_RS15830 PF00128 Alpha amylase, catalytic domain LQ330_RS15835 PF02446 4-alpha-glucanotransferase LQ330_RS15840 PF11941 Domain of unknown function (DUF3459) LQ330_RS15840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQ330_RS15840 PF00128 Alpha amylase, catalytic domain LQ330_RS15845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQ330_RS15845 PF00128 Alpha amylase, catalytic domain LQ330_RS15845 PF02806 Alpha amylase, C-terminal all-beta domain LQ330_RS15850 PF08323 Starch synthase catalytic domain LQ330_RS15850 PF00534 Glycosyl transferases group 1 LQ330_RS15855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS15855 PF08447 PAS fold LQ330_RS15860 PF00258 Flavodoxin LQ330_RS15860 PF00175 Oxidoreductase NAD-binding domain LQ330_RS15860 PF00667 FAD binding domain LQ330_RS15865 PF00005 ABC transporter LQ330_RS15865 PF08402 TOBE domain LQ330_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS15880 PF00027 Cyclic nucleotide-binding domain LQ330_RS15880 PF13545 Crp-like helix-turn-helix domain LQ330_RS15890 PF12804 MobA-like NTP transferase domain LQ330_RS15895 PF02391 MoaE protein LQ330_RS15905 PF00994 Probable molybdopterin binding domain LQ330_RS15905 PF03454 MoeA C-terminal region (domain IV) LQ330_RS15905 PF03453 MoeA N-terminal region (domain I and II) LQ330_RS15910 PF01967 MoaC family LQ330_RS15910 PF00994 Probable molybdopterin binding domain LQ330_RS15915 PF04055 Radical SAM superfamily LQ330_RS15915 PF06463 Molybdenum Cofactor Synthesis C LQ330_RS15940 PF00561 alpha/beta hydrolase fold LQ330_RS15945 PF12833 Helix-turn-helix domain LQ330_RS15945 PF02311 AraC-like ligand binding domain LQ330_RS15960 PF13533 Biotin-lipoyl like LQ330_RS15965 PF02321 Outer membrane efflux protein LQ330_RS15990 PF00072 Response regulator receiver domain LQ330_RS15990 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS15995 PF00672 HAMP domain LQ330_RS15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS15995 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS16000 PF01219 Prokaryotic diacylglycerol kinase LQ330_RS16005 PF00884 Sulfatase LQ330_RS16005 PF08019 Phosphoethanolamine transferase EptA/EptB LQ330_RS16025 PF00691 OmpA family LQ330_RS16040 PF00106 short chain dehydrogenase LQ330_RS16045 PF00501 AMP-binding enzyme LQ330_RS16045 PF00668 Condensation domain LQ330_RS16045 PF00550 Phosphopantetheine attachment site LQ330_RS16045 PF00975 Thioesterase domain LQ330_RS16050 PF00857 Isochorismatase family LQ330_RS16050 PF00550 Phosphopantetheine attachment site LQ330_RS16055 PF00550 Phosphopantetheine attachment site LQ330_RS16055 PF00857 Isochorismatase family LQ330_RS16060 PF13193 AMP-binding enzyme C-terminal domain LQ330_RS16060 PF00501 AMP-binding enzyme LQ330_RS16065 PF00425 chorismate binding enzyme LQ330_RS16070 PF07690 Major Facilitator Superfamily LQ330_RS16075 PF12823 Domain of unknown function (DUF3817) LQ330_RS16075 PF03176 MMPL family LQ330_RS16080 PF00296 Luciferase-like monooxygenase LQ330_RS16095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQ330_RS16095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQ330_RS16110 PF00487 Fatty acid desaturase LQ330_RS16115 PF00970 Oxidoreductase FAD-binding domain LQ330_RS16115 PF00111 2Fe-2S iron-sulfur cluster binding domain LQ330_RS16115 PF00175 Oxidoreductase NAD-binding domain LQ330_RS16120 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS16125 PF02742 Iron dependent repressor, metal binding and dimerisation domain LQ330_RS16125 PF01325 Iron dependent repressor, N-terminal DNA binding domain LQ330_RS16130 PF01566 Natural resistance-associated macrophage protein LQ330_RS16145 PF00268 Ribonucleotide reductase, small chain LQ330_RS16150 PF00317 Ribonucleotide reductase, all-alpha domain LQ330_RS16150 PF03477 ATP cone domain LQ330_RS16150 PF02867 Ribonucleotide reductase, barrel domain LQ330_RS16155 PF14765 Polyketide synthase dehydratase LQ330_RS16155 PF00698 Acyl transferase domain LQ330_RS16155 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS16155 PF00107 Zinc-binding dehydrogenase LQ330_RS16155 PF16197 Ketoacyl-synthetase C-terminal extension LQ330_RS16155 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ330_RS16155 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ330_RS16155 PF08659 KR domain LQ330_RS16155 PF00550 Phosphopantetheine attachment site LQ330_RS16160 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS16160 PF00593 TonB dependent receptor LQ330_RS16165 PF02028 BCCT, betaine/carnitine/choline family transporter LQ330_RS16175 PF00893 Small Multidrug Resistance protein LQ330_RS16180 PF00893 Small Multidrug Resistance protein LQ330_RS16185 PF03466 LysR substrate binding domain LQ330_RS16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS16195 PF00593 TonB dependent receptor LQ330_RS16195 PF07660 Secretin and TonB N terminus short domain LQ330_RS16195 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS16200 PF00654 Voltage gated chloride channel LQ330_RS16205 PF02308 MgtC family LQ330_RS16215 PF08241 Methyltransferase domain LQ330_RS16225 PF00691 OmpA family LQ330_RS16230 PF13018 Extended Signal Peptide of Type V secretion system LQ330_RS16230 PF03895 YadA-like membrane anchor domain LQ330_RS16230 PF05658 Head domain of trimeric autotransporter adhesin LQ330_RS16230 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ330_RS16260 PF13629 Pilus formation protein N terminal region LQ330_RS16260 PF00263 Bacterial type II and III secretion system protein LQ330_RS16260 PF04972 BON domain LQ330_RS16270 PF00437 Type II/IV secretion system protein LQ330_RS16310 PF00561 alpha/beta hydrolase fold LQ330_RS16325 PF05977 Transmembrane secretion effector LQ330_RS16335 PF01979 Amidohydrolase family LQ330_RS16345 PF00857 Isochorismatase family LQ330_RS16350 PF12833 Helix-turn-helix domain LQ330_RS16350 PF10114 Sensory domain found in PocR LQ330_RS16360 PF00672 HAMP domain LQ330_RS16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS16360 PF07730 Histidine kinase LQ330_RS16360 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQ330_RS16365 PF00072 Response regulator receiver domain LQ330_RS16365 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS16370 PF07690 Major Facilitator Superfamily LQ330_RS16375 PF03466 LysR substrate binding domain LQ330_RS16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS16380 PF01979 Amidohydrolase family LQ330_RS16390 PF03466 LysR substrate binding domain LQ330_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS16395 PF01979 Amidohydrolase family LQ330_RS16405 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS16405 PF00593 TonB dependent receptor LQ330_RS16415 PF02611 CDP-diacylglycerol pyrophosphatase LQ330_RS16430 PF09330 D-lactate dehydrogenase, membrane binding LQ330_RS16430 PF01565 FAD binding domain LQ330_RS16435 PF01070 FMN-dependent dehydrogenase LQ330_RS16440 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS16440 PF07729 FCD domain LQ330_RS16445 PF02652 L-lactate permease LQ330_RS16450 PF02308 MgtC family LQ330_RS16460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS16465 PF12833 Helix-turn-helix domain LQ330_RS16485 PF03466 LysR substrate binding domain LQ330_RS16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS16490 PF07691 PA14 domain LQ330_RS16490 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ330_RS16490 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ330_RS16490 PF14310 Fibronectin type III-like domain LQ330_RS16510 PF02811 PHP domain LQ330_RS16510 PF14579 Helix-hairpin-helix motif LQ330_RS16510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQ330_RS16510 PF01336 OB-fold nucleic acid binding domain LQ330_RS16510 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQ330_RS16520 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS16520 PF00155 Aminotransferase class I and II LQ330_RS16525 PF01168 Alanine racemase, N-terminal domain LQ330_RS16540 PF04542 Sigma-70 region 2 LQ330_RS16540 PF08281 Sigma-70, region 4 LQ330_RS16550 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS16550 PF00593 TonB dependent receptor LQ330_RS16570 PF01276 Orn/Lys/Arg decarboxylase, major domain LQ330_RS16570 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LQ330_RS16570 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LQ330_RS16575 PF13520 Amino acid permease LQ330_RS16585 PF13098 Thioredoxin-like domain LQ330_RS16590 PF00578 AhpC/TSA family LQ330_RS16595 PF02311 AraC-like ligand binding domain LQ330_RS16595 PF12833 Helix-turn-helix domain LQ330_RS16600 PF13411 MerR HTH family regulatory protein LQ330_RS16655 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS16660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS16660 PF08447 PAS fold LQ330_RS16660 PF13426 PAS domain LQ330_RS16675 PF05231 MASE1 LQ330_RS16675 PF08447 PAS fold LQ330_RS16675 PF08448 PAS fold LQ330_RS16675 PF13426 PAS domain LQ330_RS16675 PF00563 EAL domain LQ330_RS16675 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS16680 PF16921 Tex protein YqgF-like domain LQ330_RS16680 PF09371 Tex-like protein N-terminal domain LQ330_RS16680 PF00575 S1 RNA binding domain LQ330_RS16680 PF17674 HHH domain LQ330_RS16695 PF04024 PspC domain LQ330_RS16700 PF17263 Family of unknown function (DUF5329) LQ330_RS16705 PF00561 alpha/beta hydrolase fold LQ330_RS16720 PF01554 MatE LQ330_RS16740 PF03618 Kinase/pyrophosphorylase LQ330_RS16745 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LQ330_RS16745 PF00391 PEP-utilising enzyme, mobile domain LQ330_RS16745 PF02896 PEP-utilising enzyme, TIM barrel domain LQ330_RS16755 PF00924 Mechanosensitive ion channel LQ330_RS16755 PF05552 Conserved TM helix LQ330_RS16760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS16770 PF00929 Exonuclease LQ330_RS16775 PF14437 MafB19-like deaminase LQ330_RS16780 PF01638 HxlR-like helix-turn-helix LQ330_RS16785 PF02525 Flavodoxin-like fold LQ330_RS16790 PF13673 Acetyltransferase (GNAT) domain LQ330_RS16855 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LQ330_RS16860 PF05101 Type IV secretory pathway, VirB3-like protein LQ330_RS16865 PF04956 TrbC/VIRB2 family LQ330_RS16870 PF01464 Transglycosylase SLT domain LQ330_RS16875 PF00437 Type II/IV secretion system protein LQ330_RS16880 PF03743 Bacterial conjugation TrbI-like protein LQ330_RS16890 PF04335 VirB8 protein LQ330_RS16900 PF02534 Type IV secretory system Conjugative DNA transfer LQ330_RS16915 PF07690 Major Facilitator Superfamily LQ330_RS16920 PF00376 MerR family regulatory protein LQ330_RS16920 PF09278 MerR, DNA binding LQ330_RS16925 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS16925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ330_RS16955 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS16955 PF13188 PAS domain LQ330_RS16955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS16955 PF08448 PAS fold LQ330_RS16955 PF00072 Response regulator receiver domain LQ330_RS16960 PF01494 FAD binding domain LQ330_RS16965 PF17754 MftR C-terminal domain LQ330_RS16965 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS16970 PF00593 TonB dependent receptor LQ330_RS16970 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS16990 PF01638 HxlR-like helix-turn-helix LQ330_RS16995 PF00107 Zinc-binding dehydrogenase LQ330_RS16995 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS17000 PF13361 UvrD-like helicase C-terminal domain LQ330_RS17000 PF00580 UvrD/REP helicase N-terminal domain LQ330_RS17000 PF12462 DNA helicase IV / RNA helicase N terminal LQ330_RS17020 PF03466 LysR substrate binding domain LQ330_RS17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS17025 PF02525 Flavodoxin-like fold LQ330_RS17035 PF02403 Seryl-tRNA synthetase N-terminal domain LQ330_RS17035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQ330_RS17040 PF03544 Gram-negative bacterial TonB protein C-terminal LQ330_RS17050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQ330_RS17055 PF01842 ACT domain LQ330_RS17055 PF01817 Chorismate mutase type II LQ330_RS17055 PF00800 Prephenate dehydratase LQ330_RS17060 PF00266 Aminotransferase class-V LQ330_RS17095 PF07969 Amidohydrolase family LQ330_RS17100 PF00221 Aromatic amino acid lyase LQ330_RS17110 PF01175 Urocanase Rossmann-like domain LQ330_RS17110 PF17392 Urocanase C-terminal domain LQ330_RS17110 PF17391 Urocanase N-terminal domain LQ330_RS17115 PF00144 Beta-lactamase LQ330_RS17120 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS17120 PF00593 TonB dependent receptor LQ330_RS17130 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS17195 PF00144 Beta-lactamase LQ330_RS17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS17200 PF03466 LysR substrate binding domain LQ330_RS17210 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS17210 PF00107 Zinc-binding dehydrogenase LQ330_RS17225 PF13360 PQQ-like domain LQ330_RS17230 PF03989 DNA gyrase C-terminal domain, beta-propeller LQ330_RS17230 PF00521 DNA gyrase/topoisomerase IV, subunit A LQ330_RS17235 PF01008 Initiation factor 2 subunit family LQ330_RS17245 PF00152 tRNA synthetases class II (D, K and N) LQ330_RS17255 PF12826 Helix-hairpin-helix motif LQ330_RS17255 PF00533 BRCA1 C Terminus (BRCT) domain LQ330_RS17255 PF01653 NAD-dependent DNA ligase adenylation domain LQ330_RS17255 PF03120 NAD-dependent DNA ligase OB-fold domain LQ330_RS17255 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LQ330_RS17260 PF00155 Aminotransferase class I and II LQ330_RS17265 PF04354 ZipA, C-terminal FtsZ-binding domain LQ330_RS17270 PF02463 RecF/RecN/SMC N terminal domain LQ330_RS17275 PF01281 Ribosomal protein L9, N-terminal domain LQ330_RS17275 PF03948 Ribosomal protein L9, C-terminal domain LQ330_RS17280 PF01084 Ribosomal protein S18 LQ330_RS17285 PF01250 Ribosomal protein S6 LQ330_RS17290 PF01521 Iron-sulphur cluster biosynthesis LQ330_RS17295 PF01336 OB-fold nucleic acid binding domain LQ330_RS17295 PF00152 tRNA synthetases class II (D, K and N) LQ330_RS17315 PF00484 Carbonic anhydrase LQ330_RS17320 PF06052 3-hydroxyanthranilic acid dioxygenase LQ330_RS17325 PF00266 Aminotransferase class-V LQ330_RS17330 PF01494 FAD binding domain LQ330_RS17335 PF08411 Exonuclease C-terminal LQ330_RS17335 PF00929 Exonuclease LQ330_RS17345 PF00248 Aldo/keto reductase family LQ330_RS17360 PF01513 ATP-NAD kinase LQ330_RS17365 PF05088 Bacterial NAD-glutamate dehydrogenase LQ330_RS17375 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS17375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS17380 PF00873 AcrB/AcrD/AcrF family LQ330_RS17390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS17390 PF02770 Acyl-CoA dehydrogenase, middle domain LQ330_RS17390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ330_RS17395 PF03551 Transcriptional regulator PadR-like family LQ330_RS17395 PF13847 Methyltransferase domain LQ330_RS17400 PF02574 Homocysteine S-methyltransferase LQ330_RS17400 PF02310 B12 binding domain LQ330_RS17400 PF02607 B12 binding domain LQ330_RS17400 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQ330_RS17400 PF00809 Pterin binding enzyme LQ330_RS17405 PF02310 B12 binding domain LQ330_RS17405 PF02607 B12 binding domain LQ330_RS17405 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQ330_RS17405 PF00809 Pterin binding enzyme LQ330_RS17405 PF02574 Homocysteine S-methyltransferase LQ330_RS17415 PF01757 Acyltransferase family LQ330_RS17425 PF04102 SlyX LQ330_RS17430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQ330_RS17430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQ330_RS17430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQ330_RS17435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ330_RS17435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQ330_RS17440 PF00255 Glutathione peroxidase LQ330_RS17450 PF00392 Bacterial regulatory proteins, gntR family LQ330_RS17455 PF00005 ABC transporter LQ330_RS17480 PF10415 Fumarase C C-terminus LQ330_RS17480 PF00206 Lyase LQ330_RS17485 PF08328 Adenylosuccinate lyase C-terminal LQ330_RS17485 PF00206 Lyase LQ330_RS17490 PF08007 Cupin superfamily protein LQ330_RS17495 PF13673 Acetyltransferase (GNAT) domain LQ330_RS17500 PF00676 Dehydrogenase E1 component LQ330_RS17500 PF16870 2-oxoglutarate dehydrogenase C-terminal LQ330_RS17500 PF02779 Transketolase, pyrimidine binding domain LQ330_RS17500 PF16078 2-oxoglutarate dehydrogenase N-terminus LQ330_RS17505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQ330_RS17505 PF00364 Biotin-requiring enzyme LQ330_RS17505 PF02817 e3 binding domain LQ330_RS17510 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS17510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ330_RS17525 PF16655 PhoD-like phosphatase, N-terminal domain LQ330_RS17525 PF09423 PhoD-like phosphatase LQ330_RS17535 PF00772 DnaB-like helicase N terminal domain LQ330_RS17535 PF03796 DnaB-like helicase C terminal domain LQ330_RS17540 PF03358 NADPH-dependent FMN reductase LQ330_RS17545 PF00733 Asparagine synthase LQ330_RS17545 PF13537 Glutamine amidotransferase domain LQ330_RS17550 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQ330_RS17550 PF02779 Transketolase, pyrimidine binding domain LQ330_RS17550 PF02780 Transketolase, C-terminal domain LQ330_RS17555 PF02798 Glutathione S-transferase, N-terminal domain LQ330_RS17575 PF01026 TatD related DNase LQ330_RS17580 PF00899 ThiF family LQ330_RS17585 PF01322 Cytochrome C' LQ330_RS17595 PF00313 'Cold-shock' DNA-binding domain LQ330_RS17605 PF02253 Phospholipase A1 LQ330_RS17610 PF03960 ArsC family LQ330_RS17615 PF00043 Glutathione S-transferase, C-terminal domain LQ330_RS17615 PF13417 Glutathione S-transferase, N-terminal domain LQ330_RS17625 PF05681 Fumarate hydratase (Fumerase) LQ330_RS17625 PF05683 Fumarase C-terminus LQ330_RS17630 PF04542 Sigma-70 region 2 LQ330_RS17630 PF08281 Sigma-70, region 4 LQ330_RS17630 PF12680 SnoaL-like domain LQ330_RS17635 PF02627 Carboxymuconolactone decarboxylase family LQ330_RS17640 PF00005 ABC transporter LQ330_RS17645 PF00970 Oxidoreductase FAD-binding domain LQ330_RS17645 PF00175 Oxidoreductase NAD-binding domain LQ330_RS17650 PF00255 Glutathione peroxidase LQ330_RS17655 PF01432 Peptidase family M3 LQ330_RS17680 PF01694 Rhomboid family LQ330_RS17685 PF00854 POT family LQ330_RS17695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQ330_RS17695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQ330_RS17700 PF00545 ribonuclease LQ330_RS17715 PF01106 NifU-like domain LQ330_RS17720 PF01329 Pterin 4 alpha carbinolamine dehydratase LQ330_RS17730 PF02535 ZIP Zinc transporter LQ330_RS17735 PF00849 RNA pseudouridylate synthase LQ330_RS17735 PF01479 S4 domain LQ330_RS17740 PF12111 Polyribonucleotide phosphorylase C terminal LQ330_RS17740 PF10150 Ribonuclease E/G family LQ330_RS17740 PF00575 S1 RNA binding domain LQ330_RS17755 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS17760 PF00528 Binding-protein-dependent transport system inner membrane component LQ330_RS17765 PF01547 Bacterial extracellular solute-binding protein LQ330_RS17780 PF00356 Bacterial regulatory proteins, lacI family LQ330_RS17785 PF01722 BolA-like protein LQ330_RS17790 PF03795 YCII-related domain LQ330_RS17795 PF02616 Segregation and condensation protein ScpA LQ330_RS17800 PF04079 Segregation and condensation complex subunit ScpB LQ330_RS17805 PF00849 RNA pseudouridylate synthase LQ330_RS17805 PF01479 S4 domain LQ330_RS17820 PF00795 Carbon-nitrogen hydrolase LQ330_RS17825 PF00155 Aminotransferase class I and II LQ330_RS17830 PF00005 ABC transporter LQ330_RS17835 PF03379 CcmB protein LQ330_RS17840 PF01578 Cytochrome C assembly protein LQ330_RS17850 PF03100 CcmE LQ330_RS17855 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LQ330_RS17855 PF01578 Cytochrome C assembly protein LQ330_RS17860 PF08534 Redoxin LQ330_RS17865 PF03918 Cytochrome C biogenesis protein LQ330_RS17875 PF00561 alpha/beta hydrolase fold LQ330_RS17885 PF00664 ABC transporter transmembrane region LQ330_RS17885 PF00005 ABC transporter LQ330_RS17890 PF00664 ABC transporter transmembrane region LQ330_RS17890 PF00005 ABC transporter LQ330_RS17895 PF01654 Cytochrome bd terminal oxidase subunit I LQ330_RS17900 PF02322 Cytochrome bd terminal oxidase subunit II LQ330_RS17930 PF01522 Polysaccharide deacetylase LQ330_RS17930 PF14883 Hypothetical glycosyl hydrolase family 13 LQ330_RS17935 PF00535 Glycosyl transferase family 2 LQ330_RS17945 PF00171 Aldehyde dehydrogenase family LQ330_RS17950 PF00696 Amino acid kinase family LQ330_RS17950 PF01472 PUA domain LQ330_RS17960 PF00206 Lyase LQ330_RS17965 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQ330_RS17975 PF00696 Amino acid kinase family LQ330_RS17975 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LQ330_RS17980 PF07687 Peptidase dimerisation domain LQ330_RS17980 PF01546 Peptidase family M20/M25/M40 LQ330_RS17985 PF00764 Arginosuccinate synthase LQ330_RS17990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQ330_RS17990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQ330_RS18000 PF09190 DALR domain LQ330_RS18000 PF01406 tRNA synthetases class I (C) catalytic domain LQ330_RS18005 PF02657 Fe-S metabolism associated domain LQ330_RS18015 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQ330_RS18020 PF01809 Putative membrane protein insertion efficiency factor LQ330_RS18025 PF01979 Amidohydrolase family LQ330_RS18030 PF08460 Bacterial SH3 domain LQ330_RS18030 PF01551 Peptidase family M23 LQ330_RS18040 PF13419 Haloacid dehalogenase-like hydrolase LQ330_RS18050 PF01979 Amidohydrolase family LQ330_RS18055 PF01132 Elongation factor P (EF-P) OB domain LQ330_RS18055 PF09285 Elongation factor P, C-terminal LQ330_RS18055 PF08207 Elongation factor P (EF-P) KOW-like domain LQ330_RS18060 PF04055 Radical SAM superfamily LQ330_RS18065 PF03707 Bacterial signalling protein N terminal repeat LQ330_RS18065 PF00563 EAL domain LQ330_RS18065 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS18065 PF13188 PAS domain LQ330_RS18075 PF00588 SpoU rRNA Methylase family LQ330_RS18080 PF00459 Inositol monophosphatase family LQ330_RS18085 PF01435 Peptidase family M48 LQ330_RS18090 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQ330_RS18095 PF00106 short chain dehydrogenase LQ330_RS18100 PF07879 PHB/PHA accumulation regulator DNA-binding domain LQ330_RS18100 PF05233 PHB accumulation regulatory domain LQ330_RS18115 PF08676 MutL C terminal dimerisation domain LQ330_RS18115 PF01119 DNA mismatch repair protein, C-terminal domain LQ330_RS18120 PF01520 N-acetylmuramoyl-L-alanine amidase LQ330_RS18120 PF11741 AMIN domain LQ330_RS18125 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LQ330_RS18130 PF01256 Carbohydrate kinase LQ330_RS18130 PF03853 YjeF-related protein N-terminus LQ330_RS18135 PF08331 Domain of unknown function (DUF1730) LQ330_RS18140 PF02601 Exonuclease VII, large subunit LQ330_RS18140 PF13742 OB-fold nucleic acid binding domain LQ330_RS18150 PF03781 Sulfatase-modifying factor enzyme 1 LQ330_RS18155 PF01612 3'-5' exonuclease LQ330_RS18155 PF00570 HRDC domain LQ330_RS18160 PF00593 TonB dependent receptor LQ330_RS18160 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS18185 PF02805 Metal binding domain of Ada LQ330_RS18185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQ330_RS18185 PF12833 Helix-turn-helix domain LQ330_RS18185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQ330_RS18190 PF16884 N-terminal domain of oxidoreductase LQ330_RS18190 PF00107 Zinc-binding dehydrogenase LQ330_RS18215 PF02770 Acyl-CoA dehydrogenase, middle domain LQ330_RS18215 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQ330_RS18215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ330_RS18215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS18225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQ330_RS18225 PF02779 Transketolase, pyrimidine binding domain LQ330_RS18225 PF02780 Transketolase, C-terminal domain LQ330_RS18255 PF00893 Small Multidrug Resistance protein LQ330_RS18260 PF07043 Protein of unknown function (DUF1328) LQ330_RS18265 PF01810 LysE type translocator LQ330_RS18270 PF01177 Asp/Glu/Hydantoin racemase LQ330_RS18300 PF00216 Bacterial DNA-binding protein LQ330_RS18305 PF03483 B3/4 domain LQ330_RS18305 PF03484 tRNA synthetase B5 domain LQ330_RS18305 PF03147 Ferredoxin-fold anticodon binding domain LQ330_RS18305 PF01588 Putative tRNA binding domain LQ330_RS18305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LQ330_RS18310 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LQ330_RS18310 PF01409 tRNA synthetases class II core domain (F) LQ330_RS18315 PF00453 Ribosomal protein L20 LQ330_RS18320 PF01632 Ribosomal protein L35 LQ330_RS18325 PF00707 Translation initiation factor IF-3, C-terminal domain LQ330_RS18325 PF05198 Translation initiation factor IF-3, N-terminal domain LQ330_RS18330 PF03129 Anticodon binding domain LQ330_RS18330 PF02824 TGS domain LQ330_RS18330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQ330_RS18330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQ330_RS18350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ330_RS18355 PF00041 Fibronectin type III domain LQ330_RS18355 PF00704 Glycosyl hydrolases family 18 LQ330_RS18360 PF00575 S1 RNA binding domain LQ330_RS18360 PF03725 3' exoribonuclease family, domain 2 LQ330_RS18360 PF01138 3' exoribonuclease family, domain 1 LQ330_RS18360 PF00013 KH domain LQ330_RS18360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LQ330_RS18365 PF00312 Ribosomal protein S15 LQ330_RS18370 PF09157 Pseudouridine synthase II TruB, C-terminal LQ330_RS18370 PF16198 tRNA pseudouridylate synthase B C-terminal domain LQ330_RS18370 PF01509 TruB family pseudouridylate synthase (N terminal domain) LQ330_RS18375 PF02033 Ribosome-binding factor A LQ330_RS18380 PF04760 Translation initiation factor IF-2, N-terminal region LQ330_RS18380 PF11987 Translation-initiation factor 2 LQ330_RS18380 PF08364 Bacterial translation initiation factor IF-2 associated region LQ330_RS18380 PF00009 Elongation factor Tu GTP binding domain LQ330_RS18385 PF13184 NusA-like KH domain LQ330_RS18385 PF00575 S1 RNA binding domain LQ330_RS18385 PF08529 NusA N-terminal domain LQ330_RS18390 PF17384 RimP C-terminal SH3 domain LQ330_RS18390 PF02576 RimP N-terminal domain LQ330_RS18405 PF00361 Proton-conducting membrane transporter LQ330_RS18410 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LQ330_RS18410 PF00361 Proton-conducting membrane transporter LQ330_RS18415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQ330_RS18415 PF00361 Proton-conducting membrane transporter LQ330_RS18420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQ330_RS18425 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LQ330_RS18430 PF12838 4Fe-4S dicluster domain LQ330_RS18435 PF00146 NADH dehydrogenase LQ330_RS18440 PF00384 Molybdopterin oxidoreductase LQ330_RS18440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LQ330_RS18440 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LQ330_RS18445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LQ330_RS18445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LQ330_RS18445 PF10531 SLBB domain LQ330_RS18455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LQ330_RS18460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LQ330_RS18465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LQ330_RS18470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LQ330_RS18485 PF00121 Triosephosphate isomerase LQ330_RS18495 PF00884 Sulfatase LQ330_RS18495 PF11893 Domain of unknown function (DUF3413) LQ330_RS18500 PF00534 Glycosyl transferases group 1 LQ330_RS18500 PF13439 Glycosyltransferase Family 4 LQ330_RS18505 PF01522 Polysaccharide deacetylase LQ330_RS18510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQ330_RS18510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQ330_RS18510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQ330_RS18510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQ330_RS18515 PF01039 Carboxyl transferase domain LQ330_RS18515 PF17848 Acetyl-coA carboxylase zinc finger domain LQ330_RS18520 PF00290 Tryptophan synthase alpha chain LQ330_RS18530 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS18535 PF03466 LysR substrate binding domain LQ330_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS18540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LQ330_RS18545 PF01416 tRNA pseudouridine synthase LQ330_RS18560 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQ330_RS18560 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQ330_RS18565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQ330_RS18565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQ330_RS18570 PF01264 Chorismate synthase LQ330_RS18575 PF05175 Methyltransferase small domain LQ330_RS18580 PF02630 SCO1/SenC LQ330_RS18585 PF02666 Phosphatidylserine decarboxylase LQ330_RS18600 PF05872 Bacterial protein of unknown function (DUF853) LQ330_RS18605 PF03449 Transcription elongation factor, N-terminal LQ330_RS18605 PF01272 Transcription elongation factor, GreA/GreB, C-term LQ330_RS18615 PF04055 Radical SAM superfamily LQ330_RS18615 PF00919 Uncharacterized protein family UPF0004 LQ330_RS18615 PF18693 TRAM domain LQ330_RS18620 PF01738 Dienelactone hydrolase family LQ330_RS18635 PF00692 dUTPase LQ330_RS18640 PF10609 NUBPL iron-transfer P-loop NTPase LQ330_RS18645 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS18645 PF00593 TonB dependent receptor LQ330_RS18650 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS18650 PF00593 TonB dependent receptor LQ330_RS18665 PF05649 Peptidase family M13 LQ330_RS18665 PF01431 Peptidase family M13 LQ330_RS18695 PF00892 EamA-like transporter family LQ330_RS18700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ330_RS18700 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ330_RS18710 PF04235 Protein of unknown function (DUF418) LQ330_RS18715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ330_RS18720 PF00877 NlpC/P60 family LQ330_RS18725 PF00877 NlpC/P60 family LQ330_RS18730 PF00375 Sodium:dicarboxylate symporter family LQ330_RS18745 PF01171 PP-loop family LQ330_RS18745 PF09179 TilS substrate binding domain LQ330_RS18745 PF11734 TilS substrate C-terminal domain LQ330_RS18750 PF02609 Exonuclease VII small subunit LQ330_RS18755 PF00348 Polyprenyl synthetase LQ330_RS18765 PF01523 Putative modulator of DNA gyrase LQ330_RS18770 PF04751 Protein of unknown function (DUF615) LQ330_RS18775 PF01523 Putative modulator of DNA gyrase LQ330_RS18785 PF10150 Ribonuclease E/G family LQ330_RS18785 PF00575 S1 RNA binding domain LQ330_RS18790 PF02545 Maf-like protein LQ330_RS18795 PF04402 Protein of unknown function (DUF541) LQ330_RS18805 PF00593 TonB dependent receptor LQ330_RS18805 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS18810 PF13520 Amino acid permease LQ330_RS18815 PF07859 alpha/beta hydrolase fold LQ330_RS18815 PF13472 GDSL-like Lipase/Acylhydrolase family LQ330_RS18825 PF02590 Predicted SPOUT methyltransferase LQ330_RS18835 PF01467 Cytidylyltransferase-like LQ330_RS18850 PF08264 Anticodon-binding domain of tRNA LQ330_RS18850 PF00133 tRNA synthetases class I (I, L, M and V) LQ330_RS18850 PF13603 Leucyl-tRNA synthetase, Domain 2 LQ330_RS18860 PF00085 Thioredoxin LQ330_RS18870 PF00563 EAL domain LQ330_RS18870 PF01590 GAF domain LQ330_RS18870 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS18870 PF00360 Phytochrome region LQ330_RS18895 PF02592 Putative vitamin uptake transporter LQ330_RS18905 PF00144 Beta-lactamase LQ330_RS18910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ330_RS18920 PF09334 tRNA synthetases class I (M) LQ330_RS18920 PF01588 Putative tRNA binding domain LQ330_RS18930 PF04060 Putative Fe-S cluster LQ330_RS18935 PF01042 Endoribonuclease L-PSP LQ330_RS18940 PF09924 Uncharacterised conserved protein (DUF2156) LQ330_RS18940 PF03706 Lysylphosphatidylglycerol synthase TM region LQ330_RS18970 PF03831 PhnA domain LQ330_RS18970 PF08274 PhnA Zinc-Ribbon LQ330_RS18975 PF00012 Hsp70 protein LQ330_RS19000 PF04542 Sigma-70 region 2 LQ330_RS19000 PF08281 Sigma-70, region 4 LQ330_RS19015 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQ330_RS19020 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LQ330_RS19025 PF01863 Protein of unknown function DUF45 LQ330_RS19035 PF13091 PLD-like domain LQ330_RS19045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LQ330_RS19045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LQ330_RS19050 PF03797 Autotransporter beta-domain LQ330_RS19050 PF00082 Subtilase family LQ330_RS19055 PF00108 Thiolase, N-terminal domain LQ330_RS19055 PF02803 Thiolase, C-terminal domain LQ330_RS19070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS19070 PF02770 Acyl-CoA dehydrogenase, middle domain LQ330_RS19070 PF18158 Adaptive response protein AidB N-terminal domain LQ330_RS19080 PF04679 ATP dependent DNA ligase C terminal region LQ330_RS19080 PF01068 ATP dependent DNA ligase domain LQ330_RS19080 PF04675 DNA ligase N terminus LQ330_RS19085 PF00270 DEAD/DEAH box helicase LQ330_RS19085 PF08494 DEAD/H associated LQ330_RS19085 PF00271 Helicase conserved C-terminal domain LQ330_RS19100 PF01494 FAD binding domain LQ330_RS19105 PF00313 'Cold-shock' DNA-binding domain LQ330_RS19110 PF01048 Phosphorylase superfamily LQ330_RS19115 PF00156 Phosphoribosyl transferase domain LQ330_RS19120 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ330_RS19125 PF01323 DSBA-like thioredoxin domain LQ330_RS19130 PF01928 CYTH domain LQ330_RS19135 PF05958 tRNA (Uracil-5-)-methyltransferase LQ330_RS19140 PF00072 Response regulator receiver domain LQ330_RS19140 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS19145 PF11967 Recombination protein O N terminal LQ330_RS19145 PF02565 Recombination protein O C terminal LQ330_RS19150 PF07650 KH domain LQ330_RS19150 PF01926 50S ribosome-binding GTPase LQ330_RS19155 PF00035 Double-stranded RNA binding motif LQ330_RS19155 PF14622 Ribonuclease-III-like LQ330_RS19165 PF10502 Signal peptidase, peptidase S26 LQ330_RS19170 PF06421 GTP-binding protein LepA C-terminus LQ330_RS19170 PF00679 Elongation factor G C-terminus LQ330_RS19170 PF00009 Elongation factor Tu GTP binding domain LQ330_RS19170 PF03144 Elongation factor Tu domain 2 LQ330_RS19175 PF13180 PDZ domain LQ330_RS19185 PF04542 Sigma-70 region 2 LQ330_RS19185 PF08281 Sigma-70, region 4 LQ330_RS19190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQ330_RS19190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQ330_RS19190 PF00378 Enoyl-CoA hydratase/isomerase LQ330_RS19195 PF02678 Pirin LQ330_RS19195 PF05726 Pirin C-terminal cupin domain LQ330_RS19200 PF00230 Major intrinsic protein LQ330_RS19210 PF05726 Pirin C-terminal cupin domain LQ330_RS19210 PF02678 Pirin LQ330_RS19215 PF02554 Carbon starvation protein CstA LQ330_RS19215 PF13722 5TM C-terminal transporter carbon starvation CstA LQ330_RS19220 PF04328 Selenoprotein, putative LQ330_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS19230 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS19230 PF00672 HAMP domain LQ330_RS19235 PF00072 Response regulator receiver domain LQ330_RS19235 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS19250 PF00884 Sulfatase LQ330_RS19250 PF08019 Phosphoethanolamine transferase EptA/EptB LQ330_RS19270 PF07690 Major Facilitator Superfamily LQ330_RS19275 PF02347 Glycine cleavage system P-protein LQ330_RS19285 PF00324 Amino acid permease LQ330_RS19290 PF02311 AraC-like ligand binding domain LQ330_RS19290 PF12833 Helix-turn-helix domain LQ330_RS19295 PF00199 Catalase LQ330_RS19295 PF06628 Catalase-related immune-responsive LQ330_RS19295 PF18011 C-terminal domain found in long catalases LQ330_RS19315 PF00672 HAMP domain LQ330_RS19315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS19315 PF02203 Tar ligand binding domain homologue LQ330_RS19320 PF07728 AAA domain (dynein-related subfamily) LQ330_RS19330 PF03734 L,D-transpeptidase catalytic domain LQ330_RS19330 PF01476 LysM domain LQ330_RS19335 PF04225 Opacity-associated protein A LysM-like domain LQ330_RS19335 PF01551 Peptidase family M23 LQ330_RS19340 PF00709 Adenylosuccinate synthetase LQ330_RS19350 PF01145 SPFH domain / Band 7 family LQ330_RS19355 PF12221 Bacterial membrane protein N terminal LQ330_RS19355 PF01145 SPFH domain / Band 7 family LQ330_RS19360 PF00107 Zinc-binding dehydrogenase LQ330_RS19360 PF08240 Alcohol dehydrogenase GroES-like domain LQ330_RS19365 PF00072 Response regulator receiver domain LQ330_RS19370 PF00226 DnaJ domain LQ330_RS19370 PF01556 DnaJ C terminal domain LQ330_RS19375 PF08534 Redoxin LQ330_RS19385 PF06832 Penicillin-Binding Protein C-terminus Family LQ330_RS19385 PF00912 Transglycosylase LQ330_RS19385 PF00905 Penicillin binding protein transpeptidase domain LQ330_RS19390 PF01835 MG2 domain LQ330_RS19390 PF17962 Bacterial macroglobulin domain 6 LQ330_RS19390 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LQ330_RS19390 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LQ330_RS19390 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LQ330_RS19390 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LQ330_RS19390 PF07703 Alpha-2-macroglobulin bait region domain LQ330_RS19390 PF00207 Alpha-2-macroglobulin family LQ330_RS19395 PF03972 MmgE/PrpD family LQ330_RS19400 PF04303 PrpF protein LQ330_RS19410 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LQ330_RS19415 PF00694 Aconitase C-terminal domain LQ330_RS19415 PF00330 Aconitase family (aconitate hydratase) LQ330_RS19420 PF00285 Citrate synthase, C-terminal domain LQ330_RS19430 PF02954 Bacterial regulatory protein, Fis family LQ330_RS19430 PF06506 Propionate catabolism activator LQ330_RS19430 PF00158 Sigma-54 interaction domain LQ330_RS19440 PF00583 Acetyltransferase (GNAT) family LQ330_RS19445 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LQ330_RS19445 PF01243 Pyridoxamine 5'-phosphate oxidase LQ330_RS19460 PF01202 Shikimate kinase LQ330_RS19465 PF01761 3-dehydroquinate synthase LQ330_RS19475 PF01208 Uroporphyrinogen decarboxylase (URO-D) LQ330_RS19480 PF07690 Major Facilitator Superfamily LQ330_RS19485 PF17149 Periplasmic sensor domain found in signal transduction proteins LQ330_RS19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS19485 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS19485 PF01627 Hpt domain LQ330_RS19485 PF00072 Response regulator receiver domain LQ330_RS19485 PF00672 HAMP domain LQ330_RS19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS19490 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS19490 PF00989 PAS fold LQ330_RS19490 PF01627 Hpt domain LQ330_RS19490 PF18415 Histidine kinase receptor ArcB trans-membrane domain LQ330_RS19490 PF00072 Response regulator receiver domain LQ330_RS19495 PF04264 YceI-like domain LQ330_RS19500 PF01292 Prokaryotic cytochrome b561 LQ330_RS19515 PF03315 Serine dehydratase beta chain LQ330_RS19515 PF03313 Serine dehydratase alpha chain LQ330_RS19520 PF00561 alpha/beta hydrolase fold LQ330_RS19525 PF00742 Homoserine dehydrogenase LQ330_RS19525 PF03447 Homoserine dehydrogenase, NAD binding domain LQ330_RS19525 PF00696 Amino acid kinase family LQ330_RS19530 PF01053 Cys/Met metabolism PLP-dependent enzyme LQ330_RS19535 PF00561 alpha/beta hydrolase fold LQ330_RS19540 PF01476 LysM domain LQ330_RS19540 PF08525 Opacity-associated protein A N-terminal motif LQ330_RS19540 PF01551 Peptidase family M23 LQ330_RS19545 PF00009 Elongation factor Tu GTP binding domain LQ330_RS19545 PF16658 Class II release factor RF3, C-terminal domain LQ330_RS19550 PF03006 Haemolysin-III related LQ330_RS19565 PF00535 Glycosyl transferase family 2 LQ330_RS19570 PF00912 Transglycosylase LQ330_RS19575 PF01430 Hsp33 protein LQ330_RS19585 PF00593 TonB dependent receptor LQ330_RS19585 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS19590 PF00440 Bacterial regulatory proteins, tetR family LQ330_RS19600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ330_RS19600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ330_RS19600 PF09317 Domain of unknown function (DUF1974) LQ330_RS19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS19630 PF03466 LysR substrate binding domain LQ330_RS19640 PF01597 Glycine cleavage H-protein LQ330_RS19645 PF08669 Glycine cleavage T-protein C-terminal barrel domain LQ330_RS19645 PF01571 Aminomethyltransferase folate-binding domain LQ330_RS19655 PF16200 C-terminal region of band_7 LQ330_RS19655 PF01145 SPFH domain / Band 7 family LQ330_RS19665 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LQ330_RS19670 PF03819 MazG nucleotide pyrophosphohydrolase domain LQ330_RS19675 PF00459 Inositol monophosphatase family LQ330_RS19680 PF00293 NUDIX domain LQ330_RS19685 PF00202 Aminotransferase class-III LQ330_RS19690 PF04452 RNA methyltransferase LQ330_RS19710 PF00072 Response regulator receiver domain LQ330_RS19710 PF01339 CheB methylesterase LQ330_RS19715 PF00072 Response regulator receiver domain LQ330_RS19715 PF01584 CheW-like domain LQ330_RS19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS19715 PF01627 Hpt domain LQ330_RS19715 PF02895 Signal transducing histidine kinase, homodimeric domain LQ330_RS19720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ330_RS19720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQ330_RS19725 PF01584 CheW-like domain LQ330_RS19730 PF00072 Response regulator receiver domain LQ330_RS19735 PF00072 Response regulator receiver domain LQ330_RS19740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LQ330_RS19740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LQ330_RS19750 PF00814 Glycoprotease family LQ330_RS19755 PF13307 Helicase C-terminal domain LQ330_RS19755 PF04851 Type III restriction enzyme, res subunit LQ330_RS19765 PF00912 Transglycosylase LQ330_RS19765 PF00905 Penicillin binding protein transpeptidase domain LQ330_RS19765 PF14814 Bifunctional transglycosylase second domain LQ330_RS19770 PF00535 Glycosyl transferase family 2 LQ330_RS19780 PF13291 ACT domain LQ330_RS19780 PF04607 Region found in RelA / SpoT proteins LQ330_RS19780 PF02824 TGS domain LQ330_RS19790 PF00271 Helicase conserved C-terminal domain LQ330_RS19790 PF00270 DEAD/DEAH box helicase LQ330_RS19790 PF11898 Domain of unknown function (DUF3418) LQ330_RS19790 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LQ330_RS19790 PF04408 Helicase associated domain (HA2) LQ330_RS19795 PF00210 Ferritin-like domain LQ330_RS19800 PF00270 DEAD/DEAH box helicase LQ330_RS19800 PF00271 Helicase conserved C-terminal domain LQ330_RS19800 PF00570 HRDC domain LQ330_RS19800 PF16124 RecQ zinc-binding LQ330_RS19800 PF09382 RQC domain LQ330_RS19810 PF07732 Multicopper oxidase LQ330_RS19810 PF07731 Multicopper oxidase LQ330_RS19810 PF00394 Multicopper oxidase LQ330_RS19815 PF05275 Copper resistance protein B precursor (CopB) LQ330_RS19835 PF00072 Response regulator receiver domain LQ330_RS19835 PF00158 Sigma-54 interaction domain LQ330_RS19835 PF02954 Bacterial regulatory protein, Fis family LQ330_RS19850 PF01757 Acyltransferase family LQ330_RS19870 PF06508 Queuosine biosynthesis protein QueC LQ330_RS19875 PF04055 Radical SAM superfamily LQ330_RS19885 PF00691 OmpA family LQ330_RS19890 PF04052 TolB amino-terminal domain LQ330_RS19890 PF07676 WD40-like Beta Propeller Repeat LQ330_RS19900 PF02472 Biopolymer transport protein ExbD/TolR LQ330_RS19905 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS19910 PF03061 Thioesterase superfamily LQ330_RS19915 PF05496 Holliday junction DNA helicase RuvB P-loop domain LQ330_RS19915 PF05491 RuvB C-terminal winged helix domain LQ330_RS19915 PF17864 RuvB AAA lid domain LQ330_RS19920 PF02705 K+ potassium transporter LQ330_RS19925 PF01330 RuvA N terminal domain LQ330_RS19925 PF07499 RuvA, C-terminal domain LQ330_RS19930 PF02075 Crossover junction endodeoxyribonuclease RuvC LQ330_RS19935 PF01709 Transcriptional regulator LQ330_RS19940 PF00561 alpha/beta hydrolase fold LQ330_RS19955 PF02938 GAD domain LQ330_RS19955 PF00152 tRNA synthetases class II (D, K and N) LQ330_RS19955 PF01336 OB-fold nucleic acid binding domain LQ330_RS19975 PF00375 Sodium:dicarboxylate symporter family LQ330_RS19985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS19985 PF03466 LysR substrate binding domain LQ330_RS19990 PF00005 ABC transporter LQ330_RS19990 PF12848 ABC transporter LQ330_RS20000 PF00999 Sodium/hydrogen exchanger family LQ330_RS20000 PF02254 TrkA-N domain LQ330_RS20005 PF01053 Cys/Met metabolism PLP-dependent enzyme LQ330_RS20010 PF00072 Response regulator receiver domain LQ330_RS20010 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS20015 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS20015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS20015 PF00672 HAMP domain LQ330_RS20015 PF16527 Two-component sensor protein CpxA, periplasmic domain LQ330_RS20030 PF10431 C-terminal, D2-small domain, of ClpB protein LQ330_RS20030 PF07724 AAA domain (Cdc48 subfamily) LQ330_RS20030 PF17871 AAA lid domain LQ330_RS20030 PF02861 Clp amino terminal domain, pathogenicity island component LQ330_RS20030 PF00004 ATPase family associated with various cellular activities (AAA) LQ330_RS20050 PF00205 Thiamine pyrophosphate enzyme, central domain LQ330_RS20050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQ330_RS20050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQ330_RS20065 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS20065 PF00593 TonB dependent receptor LQ330_RS20070 PF02358 Trehalose-phosphatase LQ330_RS20075 PF00723 Glycosyl hydrolases family 15 LQ330_RS20080 PF00982 Glycosyltransferase family 20 LQ330_RS20085 PF04134 Protein of unknown function, DUF393 LQ330_RS20095 PF02578 Multi-copper polyphenol oxidoreductase laccase LQ330_RS20100 PF00849 RNA pseudouridylate synthase LQ330_RS20105 PF13525 Outer membrane lipoprotein LQ330_RS20115 PF00795 Carbon-nitrogen hydrolase LQ330_RS20115 PF02540 NAD synthase LQ330_RS20120 PF02629 CoA binding domain LQ330_RS20120 PF00549 CoA-ligase LQ330_RS20125 PF00549 CoA-ligase LQ330_RS20125 PF08442 ATP-grasp domain LQ330_RS20130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS20130 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS20135 PF02954 Bacterial regulatory protein, Fis family LQ330_RS20135 PF00072 Response regulator receiver domain LQ330_RS20135 PF00158 Sigma-54 interaction domain LQ330_RS20140 PF00437 Type II/IV secretion system protein LQ330_RS20140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ330_RS20145 PF17284 Spermidine synthase tetramerisation domain LQ330_RS20150 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS20150 PF00114 Pilin (bacterial filament) LQ330_RS20155 PF00114 Pilin (bacterial filament) LQ330_RS20155 PF07963 Prokaryotic N-terminal methylation motif LQ330_RS20160 PF00482 Type II secretion system (T2SS), protein F LQ330_RS20165 PF01478 Type IV leader peptidase family LQ330_RS20165 PF06750 Bacterial Peptidase A24 N-terminal domain LQ330_RS20170 PF01121 Dephospho-CoA kinase LQ330_RS20180 PF11808 Phosphate regulon sensor protein PhoR LQ330_RS20180 PF00989 PAS fold LQ330_RS20180 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS20185 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS20185 PF00072 Response regulator receiver domain LQ330_RS20205 PF18030 RimK PreATP-grasp domain LQ330_RS20205 PF08443 RimK-like ATP-grasp domain LQ330_RS20225 PF00657 GDSL-like Lipase/Acylhydrolase LQ330_RS20225 PF03797 Autotransporter beta-domain LQ330_RS20235 PF05690 Thiazole biosynthesis protein ThiG LQ330_RS20240 PF02390 Putative methyltransferase LQ330_RS20245 PF03600 Citrate transporter LQ330_RS20245 PF02080 TrkA-C domain LQ330_RS20260 PF01557 Fumarylacetoacetate (FAA) hydrolase family LQ330_RS20265 PF01741 Large-conductance mechanosensitive channel, MscL LQ330_RS20275 PF01235 Sodium:alanine symporter family LQ330_RS20285 PF00588 SpoU rRNA Methylase family LQ330_RS20285 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQ330_RS20290 PF01235 Sodium:alanine symporter family LQ330_RS20300 PF00873 AcrB/AcrD/AcrF family LQ330_RS20305 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS20305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ330_RS20320 PF03466 LysR substrate binding domain LQ330_RS20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS20325 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS20330 PF01661 Macro domain LQ330_RS20340 PF00274 Fructose-bisphosphate aldolase class-I LQ330_RS20345 PF02887 Pyruvate kinase, alpha/beta domain LQ330_RS20345 PF00224 Pyruvate kinase, barrel domain LQ330_RS20350 PF13419 Haloacid dehalogenase-like hydrolase LQ330_RS20355 PF00162 Phosphoglycerate kinase LQ330_RS20370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQ330_RS20370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQ330_RS20375 PF03922 OmpW family LQ330_RS20385 PF00753 Metallo-beta-lactamase superfamily LQ330_RS20400 PF03965 Penicillinase repressor LQ330_RS20415 PF01381 Helix-turn-helix LQ330_RS20420 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LQ330_RS20425 PF02779 Transketolase, pyrimidine binding domain LQ330_RS20425 PF02780 Transketolase, C-terminal domain LQ330_RS20425 PF00456 Transketolase, thiamine diphosphate binding domain LQ330_RS20430 PF00375 Sodium:dicarboxylate symporter family LQ330_RS20440 PF07584 Aerotolerance regulator N-terminal LQ330_RS20440 PF13519 von Willebrand factor type A domain LQ330_RS20460 PF17863 AAA lid domain LQ330_RS20460 PF07726 ATPase family associated with various cellular activities (AAA) LQ330_RS20465 PF11741 AMIN domain LQ330_RS20465 PF00263 Bacterial type II and III secretion system protein LQ330_RS20465 PF03958 Bacterial type II/III secretion system short domain LQ330_RS20465 PF07660 Secretin and TonB N terminus short domain LQ330_RS20470 PF04351 Pilus assembly protein, PilP LQ330_RS20475 PF04350 Pilus assembly protein, PilO LQ330_RS20485 PF11104 Type IV pilus assembly protein PilM; LQ330_RS20490 PF17092 Penicillin-binding protein OB-like domain LQ330_RS20490 PF00912 Transglycosylase LQ330_RS20490 PF00905 Penicillin binding protein transpeptidase domain LQ330_RS20505 PF13018 Extended Signal Peptide of Type V secretion system LQ330_RS20505 PF03895 YadA-like membrane anchor domain LQ330_RS20505 PF05658 Head domain of trimeric autotransporter adhesin LQ330_RS20505 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ330_RS20535 PF00285 Citrate synthase, C-terminal domain LQ330_RS20540 PF01197 Ribosomal protein L31 LQ330_RS20545 PF01156 Inosine-uridine preferring nucleoside hydrolase LQ330_RS20550 PF17191 RecG wedge domain LQ330_RS20550 PF00270 DEAD/DEAH box helicase LQ330_RS20550 PF00271 Helicase conserved C-terminal domain LQ330_RS20555 PF01042 Endoribonuclease L-PSP LQ330_RS20560 PF13291 ACT domain LQ330_RS20560 PF04607 Region found in RelA / SpoT proteins LQ330_RS20560 PF02824 TGS domain LQ330_RS20565 PF01192 RNA polymerase Rpb6 LQ330_RS20570 PF00625 Guanylate kinase LQ330_RS20580 PF13247 4Fe-4S dicluster domain LQ330_RS20580 PF12800 4Fe-4S binding domain LQ330_RS20580 PF09163 Formate dehydrogenase N, transmembrane LQ330_RS20585 PF01292 Prokaryotic cytochrome b561 LQ330_RS20595 PF04216 Protein involved in formate dehydrogenase formation LQ330_RS20600 PF12390 Selenocysteine synthase N terminal LQ330_RS20600 PF03841 L-seryl-tRNA selenium transferase LQ330_RS20605 PF00009 Elongation factor Tu GTP binding domain LQ330_RS20605 PF03144 Elongation factor Tu domain 2 LQ330_RS20605 PF09106 Elongation factor SelB, winged helix LQ330_RS20605 PF09107 Elongation factor SelB, winged helix LQ330_RS20615 PF00586 AIR synthase related protein, N-terminal domain LQ330_RS20615 PF02769 AIR synthase related protein, C-terminal domain LQ330_RS20620 PF03755 YicC-like family, N-terminal region LQ330_RS20620 PF08340 Domain of unknown function (DUF1732) LQ330_RS20625 PF01138 3' exoribonuclease family, domain 1 LQ330_RS20625 PF03725 3' exoribonuclease family, domain 2 LQ330_RS20630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ330_RS20635 PF01725 Ham1 family LQ330_RS20640 PF04055 Radical SAM superfamily LQ330_RS20640 PF06969 HemN C-terminal domain LQ330_RS20655 PF00557 Metallopeptidase family M24 LQ330_RS20660 PF00557 Metallopeptidase family M24 LQ330_RS20660 PF05195 Aminopeptidase P, N-terminal domain LQ330_RS20665 PF03695 Uncharacterised protein family (UPF0149) LQ330_RS20675 PF05164 Cell division protein ZapA LQ330_RS20685 PF01812 5-formyltetrahydrofolate cyclo-ligase family LQ330_RS20695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LQ330_RS20705 PF13369 Transglutaminase-like superfamily LQ330_RS20710 PF00301 Rubredoxin LQ330_RS20715 PF02581 Thiamine monophosphate synthase LQ330_RS20720 PF00202 Aminotransferase class-III LQ330_RS20725 PF00127 Copper binding proteins, plastocyanin/azurin family LQ330_RS20735 PF00202 Aminotransferase class-III LQ330_RS20740 PF00027 Cyclic nucleotide-binding domain LQ330_RS20740 PF00520 Ion transport protein LQ330_RS20745 PF12889 Protein of unknown function (DUF3829) LQ330_RS20750 PF12889 Protein of unknown function (DUF3829) LQ330_RS20775 PF01569 PAP2 superfamily LQ330_RS20785 PF02875 Mur ligase family, glutamate ligase domain LQ330_RS20785 PF08245 Mur ligase middle domain LQ330_RS20785 PF01225 Mur ligase family, catalytic domain LQ330_RS20795 PF00365 Phosphofructokinase LQ330_RS20810 PF03030 Inorganic H+ pyrophosphatase LQ330_RS20815 PF01618 MotA/TolQ/ExbB proton channel family LQ330_RS20820 PF04304 Protein of unknown function (DUF454) LQ330_RS20825 PF01126 Heme oxygenase LQ330_RS20835 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS20835 PF00593 TonB dependent receptor LQ330_RS20855 PF00719 Inorganic pyrophosphatase LQ330_RS20870 PF00593 TonB dependent receptor LQ330_RS20870 PF07715 TonB-dependent Receptor Plug Domain LQ330_RS20875 PF12833 Helix-turn-helix domain LQ330_RS20875 PF01965 DJ-1/PfpI family LQ330_RS20880 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS20880 PF00072 Response regulator receiver domain LQ330_RS20890 PF01964 Radical SAM ThiC family LQ330_RS20890 PF13667 ThiC-associated domain LQ330_RS20895 PF02028 BCCT, betaine/carnitine/choline family transporter LQ330_RS20900 PF13276 HTH-like domain LQ330_RS20900 PF00665 Integrase core domain LQ330_RS20900 PF13333 Integrase core domain LQ330_RS20905 PF01527 Transposase LQ330_RS20920 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LQ330_RS20920 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LQ330_RS20925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQ330_RS20925 PF00205 Thiamine pyrophosphate enzyme, central domain LQ330_RS20925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQ330_RS20935 PF00291 Pyridoxal-phosphate dependent enzyme LQ330_RS20940 PF08502 LeuA allosteric (dimerisation) domain LQ330_RS20940 PF00682 HMGL-like LQ330_RS20950 PF00330 Aconitase family (aconitate hydratase) LQ330_RS20955 PF00694 Aconitase C-terminal domain LQ330_RS20960 PF00180 Isocitrate/isopropylmalate dehydrogenase LQ330_RS20970 PF03466 LysR substrate binding domain LQ330_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ330_RS20975 PF00873 AcrB/AcrD/AcrF family LQ330_RS20980 PF13533 Biotin-lipoyl like LQ330_RS20995 PF02321 Outer membrane efflux protein LQ330_RS21000 PF13520 Amino acid permease LQ330_RS21005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LQ330_RS21010 PF03279 Bacterial lipid A biosynthesis acyltransferase LQ330_RS21045 PF01515 Phosphate acetyl/butaryl transferase LQ330_RS21045 PF03949 Malic enzyme, NAD binding domain LQ330_RS21045 PF00390 Malic enzyme, N-terminal domain LQ330_RS21050 PF00375 Sodium:dicarboxylate symporter family LQ330_RS21060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS21060 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS21070 PF00072 Response regulator receiver domain LQ330_RS21070 PF00196 Bacterial regulatory proteins, luxR family LQ330_RS21080 PF00512 His Kinase A (phospho-acceptor) domain LQ330_RS21080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ330_RS21080 PF08521 Two-component sensor kinase N-terminal LQ330_RS21085 PF00072 Response regulator receiver domain LQ330_RS21085 PF00486 Transcriptional regulatory protein, C terminal LQ330_RS21095 PF03600 Citrate transporter LQ330_RS21100 PF00106 short chain dehydrogenase LQ330_RS21115 PF03193 RsgA GTPase LQ330_RS21120 PF00155 Aminotransferase class I and II LQ330_RS21135 PF01522 Polysaccharide deacetylase LQ330_RS21140 PF00462 Glutaredoxin LQ330_RS21155 PF03797 Autotransporter beta-domain LQ330_RS21155 PF12951 Passenger-associated-transport-repeat LQ330_RS21155 PF00082 Subtilase family LQ330_RS21160 PF01979 Amidohydrolase family LQ330_RS21165 PF00449 Urease alpha-subunit, N-terminal domain LQ330_RS21165 PF01979 Amidohydrolase family LQ330_RS21170 PF01323 DSBA-like thioredoxin domain LQ330_RS21175 PF02645 Uncharacterised protein, DegV family COG1307 LQ330_RS21185 PF00990 Diguanylate cyclase, GGDEF domain LQ330_RS21185 PF00563 EAL domain LQ330_RS21185 PF01590 GAF domain LQ330_RS21185 PF00360 Phytochrome region LQ330_RS21225 PF00005 ABC transporter LQ330_RS21235 PF00529 HlyD membrane-fusion protein of T1SS LQ330_RS21235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion