locus-tag class description LQ331_RS00010 PF06167 Glucose-regulated metallo-peptidase M90 LQ331_RS00020 PF02237 Biotin protein ligase C terminal domain LQ331_RS00020 PF03099 Biotin/lipoate A/B protein ligase family LQ331_RS00020 PF08279 HTH domain LQ331_RS00025 PF03309 Type III pantothenate kinase LQ331_RS00065 PF00491 Arginase family LQ331_RS00075 PF05532 CsbD-like LQ331_RS00085 PF00579 tRNA synthetases class I (W and Y) LQ331_RS00095 PF00753 Metallo-beta-lactamase superfamily LQ331_RS00110 PF00083 Sugar (and other) transporter LQ331_RS00115 PF00892 EamA-like transporter family LQ331_RS00120 PF00892 EamA-like transporter family LQ331_RS00125 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS00125 PF00593 TonB dependent receptor LQ331_RS00130 PF12704 MacB-like periplasmic core domain LQ331_RS00130 PF02687 FtsX-like permease family LQ331_RS00130 PF00005 ABC transporter LQ331_RS00140 PF00005 ABC transporter LQ331_RS00145 PF13533 Biotin-lipoyl like LQ331_RS00150 PF00005 ABC transporter LQ331_RS00160 PF07730 Histidine kinase LQ331_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS00165 PF00072 Response regulator receiver domain LQ331_RS00165 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS00180 PF02789 Cytosol aminopeptidase family, N-terminal domain LQ331_RS00180 PF00883 Cytosol aminopeptidase family, catalytic domain LQ331_RS00185 PF13419 Haloacid dehalogenase-like hydrolase LQ331_RS00195 PF01594 AI-2E family transporter LQ331_RS00215 PF00595 PDZ domain LQ331_RS00230 PF07237 Protein of unknown function (DUF1428) LQ331_RS00235 PF00326 Prolyl oligopeptidase family LQ331_RS00235 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LQ331_RS00245 PF00072 Response regulator receiver domain LQ331_RS00245 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS00260 PF07690 Major Facilitator Superfamily LQ331_RS00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS00265 PF03466 LysR substrate binding domain LQ331_RS00270 PF07308 Protein of unknown function (DUF1456) LQ331_RS00280 PF00106 short chain dehydrogenase LQ331_RS00290 PF03485 Arginyl tRNA synthetase N terminal domain LQ331_RS00290 PF05746 DALR anticodon binding domain LQ331_RS00290 PF00750 tRNA synthetases class I (R) LQ331_RS00355 PF02463 RecF/RecN/SMC N terminal domain LQ331_RS00375 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS00375 PF00072 Response regulator receiver domain LQ331_RS00380 PF04127 DNA / pantothenate metabolism flavoprotein LQ331_RS00380 PF02441 Flavoprotein LQ331_RS00385 PF00692 dUTPase LQ331_RS00390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQ331_RS00390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQ331_RS00390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQ331_RS00390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQ331_RS00395 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS00395 PF00072 Response regulator receiver domain LQ331_RS00400 PF02702 Osmosensitive K+ channel His kinase sensor domain LQ331_RS00400 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS00400 PF13492 GAF domain LQ331_RS00400 PF13493 Domain of unknown function (DUF4118) LQ331_RS00405 PF02669 K+-transporting ATPase, c chain LQ331_RS00415 PF03814 Potassium-transporting ATPase A subunit LQ331_RS00430 PF00156 Phosphoribosyl transferase domain LQ331_RS00435 PF03372 Endonuclease/Exonuclease/phosphatase family LQ331_RS00440 PF07690 Major Facilitator Superfamily LQ331_RS00450 PF03702 Anhydro-N-acetylmuramic acid kinase LQ331_RS00455 PF01551 Peptidase family M23 LQ331_RS00455 PF04225 Opacity-associated protein A LysM-like domain LQ331_RS00460 PF00579 tRNA synthetases class I (W and Y) LQ331_RS00510 PF04389 Peptidase family M28 LQ331_RS00520 PF01551 Peptidase family M23 LQ331_RS00525 PF13180 PDZ domain LQ331_RS00525 PF03572 Peptidase family S41 LQ331_RS00540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LQ331_RS00545 PF04973 Nicotinamide mononucleotide transporter LQ331_RS00555 PF00171 Aldehyde dehydrogenase family LQ331_RS00555 PF14850 DNA-binding domain of Proline dehydrogenase LQ331_RS00555 PF01619 Proline dehydrogenase LQ331_RS00555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LQ331_RS00565 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LQ331_RS00565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQ331_RS00570 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQ331_RS00580 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LQ331_RS00585 PF00510 Cytochrome c oxidase subunit III LQ331_RS00610 PF01040 UbiA prenyltransferase family LQ331_RS00620 PF13593 SBF-like CPA transporter family (DUF4137) LQ331_RS00630 PF10410 DnaB-helicase binding domain of primase LQ331_RS00630 PF08278 DNA primase DnaG DnaB-binding LQ331_RS00630 PF08275 DNA primase catalytic core, N-terminal domain LQ331_RS00630 PF01807 CHC2 zinc finger LQ331_RS00635 PF03631 Virulence factor BrkB LQ331_RS00645 PF01165 Ribosomal protein S21 LQ331_RS00650 PF00814 Glycoprotease family LQ331_RS00660 PF02152 Dihydroneopterin aldolase LQ331_RS00665 PF00924 Mechanosensitive ion channel LQ331_RS00670 PF14310 Fibronectin type III-like domain LQ331_RS00670 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ331_RS00670 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ331_RS00680 PF07995 Glucose / Sorbosone dehydrogenase LQ331_RS00685 PF05360 yiaA/B two helix domain LQ331_RS00695 PF13520 Amino acid permease LQ331_RS00705 PF01380 SIS domain LQ331_RS00705 PF01418 Helix-turn-helix domain, rpiR family LQ331_RS00710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQ331_RS00710 PF13378 Enolase C-terminal domain-like LQ331_RS00725 PF00593 TonB dependent receptor LQ331_RS00730 PF00144 Beta-lactamase LQ331_RS00735 PF01427 D-ala-D-ala dipeptidase LQ331_RS00760 PF07063 Domain of unknown function (DUF1338) LQ331_RS00765 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LQ331_RS00765 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LQ331_RS00770 PF08335 GlnD PII-uridylyltransferase LQ331_RS00770 PF03710 Glutamate-ammonia ligase adenylyltransferase LQ331_RS00775 PF02592 Putative vitamin uptake transporter LQ331_RS00805 PF00881 Nitroreductase family LQ331_RS00810 PF04264 YceI-like domain LQ331_RS00830 PF08021 Siderophore-interacting FAD-binding domain LQ331_RS00830 PF04954 Siderophore-interacting protein LQ331_RS00835 PF03551 Transcriptional regulator PadR-like family LQ331_RS00840 PF17831 Pyruvate dehydrogenase E1 component middle domain LQ331_RS00840 PF00456 Transketolase, thiamine diphosphate binding domain LQ331_RS00845 PF07693 KAP family P-loop domain LQ331_RS00860 PF09217 Restriction endonuclease EcoRII, N-terminal LQ331_RS00860 PF09019 EcoRII C terminal LQ331_RS00865 PF12419 SNF2 Helicase protein LQ331_RS00865 PF00271 Helicase conserved C-terminal domain LQ331_RS00865 PF00176 SNF2 family N-terminal domain LQ331_RS00870 PF03852 DNA mismatch endonuclease Vsr LQ331_RS00875 PF18284 DNA methylase N-terminal domain LQ331_RS00875 PF00145 C-5 cytosine-specific DNA methylase LQ331_RS00935 PF00561 alpha/beta hydrolase fold LQ331_RS00980 PF16916 Dimerisation domain of Zinc Transporter LQ331_RS00980 PF01545 Cation efflux family LQ331_RS00985 PF02583 Metal-sensitive transcriptional repressor LQ331_RS00995 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQ331_RS00995 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQ331_RS01000 PF00005 ABC transporter LQ331_RS01000 PF12848 ABC transporter LQ331_RS01005 PF03466 LysR substrate binding domain LQ331_RS01005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS01010 PF00144 Beta-lactamase LQ331_RS01015 PF07690 Major Facilitator Superfamily LQ331_RS01020 PF00563 EAL domain LQ331_RS01020 PF12792 CSS motif domain associated with EAL LQ331_RS01025 PF00324 Amino acid permease LQ331_RS01030 PF01464 Transglycosylase SLT domain LQ331_RS01055 PF06983 3-demethylubiquinone-9 3-methyltransferase LQ331_RS01065 PF07237 Protein of unknown function (DUF1428) LQ331_RS01070 PF04542 Sigma-70 region 2 LQ331_RS01070 PF08281 Sigma-70, region 4 LQ331_RS01100 PF07694 5TMR of 5TMR-LYT LQ331_RS01100 PF06580 Histidine kinase LQ331_RS01105 PF00072 Response regulator receiver domain LQ331_RS01105 PF04397 LytTr DNA-binding domain LQ331_RS01125 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS01135 PF07690 Major Facilitator Superfamily LQ331_RS01140 PF01431 Peptidase family M13 LQ331_RS01140 PF05649 Peptidase family M13 LQ331_RS01145 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS01145 PF00563 EAL domain LQ331_RS01145 PF08448 PAS fold LQ331_RS01145 PF08447 PAS fold LQ331_RS01150 PF03466 LysR substrate binding domain LQ331_RS01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS01160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LQ331_RS01165 PF00999 Sodium/hydrogen exchanger family LQ331_RS01190 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQ331_RS01190 PF00691 OmpA family LQ331_RS01195 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS01200 PF01641 SelR domain LQ331_RS01215 PF01037 Lrp/AsnC ligand binding domain LQ331_RS01220 PF01266 FAD dependent oxidoreductase LQ331_RS01225 PF00842 Alanine racemase, C-terminal domain LQ331_RS01225 PF01168 Alanine racemase, N-terminal domain LQ331_RS01235 PF00672 HAMP domain LQ331_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS01235 PF18698 Histidine kinase sensor domain LQ331_RS01235 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS01235 PF00989 PAS fold LQ331_RS01250 PF05175 Methyltransferase small domain LQ331_RS01250 PF08468 Methyltransferase small domain N-terminal LQ331_RS01255 PF01479 S4 domain LQ331_RS01255 PF00849 RNA pseudouridylate synthase LQ331_RS01260 PF13419 Haloacid dehalogenase-like hydrolase LQ331_RS01265 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ331_RS01265 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ331_RS01270 PF07977 FabA-like domain LQ331_RS01275 PF00817 impB/mucB/samB family LQ331_RS01275 PF11799 impB/mucB/samB family C-terminal domain LQ331_RS01275 PF11798 IMS family HHH motif LQ331_RS01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS01290 PF03466 LysR substrate binding domain LQ331_RS01295 PF08241 Methyltransferase domain LQ331_RS01300 PF13419 Haloacid dehalogenase-like hydrolase LQ331_RS01305 PF00593 TonB dependent receptor LQ331_RS01305 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS01320 PF13185 GAF domain LQ331_RS01330 PF00155 Aminotransferase class I and II LQ331_RS01330 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS01335 PF01625 Peptide methionine sulfoxide reductase LQ331_RS01340 PF17991 Thioredoxin like C-terminal domain LQ331_RS01340 PF00578 AhpC/TSA family LQ331_RS01340 PF02683 Cytochrome C biogenesis protein transmembrane region LQ331_RS01345 PF01641 SelR domain LQ331_RS01350 PF00072 Response regulator receiver domain LQ331_RS01350 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS01355 PF07689 KaiB domain LQ331_RS01355 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS01360 PF00672 HAMP domain LQ331_RS01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS01360 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS01365 PF00072 Response regulator receiver domain LQ331_RS01365 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS01370 PF13537 Glutamine amidotransferase domain LQ331_RS01370 PF00733 Asparagine synthase LQ331_RS01380 PF01242 6-pyruvoyl tetrahydropterin synthase LQ331_RS01385 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS01385 PF00593 TonB dependent receptor LQ331_RS01395 PF00271 Helicase conserved C-terminal domain LQ331_RS01395 PF00270 DEAD/DEAH box helicase LQ331_RS01405 PF14497 Glutathione S-transferase, C-terminal domain LQ331_RS01405 PF02798 Glutathione S-transferase, N-terminal domain LQ331_RS01420 PF00437 Type II/IV secretion system protein LQ331_RS01440 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS01440 PF00571 CBS domain LQ331_RS01445 PF01053 Cys/Met metabolism PLP-dependent enzyme LQ331_RS01450 PF01061 ABC-2 type transporter LQ331_RS01455 PF00005 ABC transporter LQ331_RS01470 PF00535 Glycosyl transferase family 2 LQ331_RS01485 PF16363 GDP-mannose 4,6 dehydratase LQ331_RS01500 PF00893 Small Multidrug Resistance protein LQ331_RS01520 PF00535 Glycosyl transferase family 2 LQ331_RS01525 PF13542 Helix-turn-helix domain of transposase family ISL3 LQ331_RS01525 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LQ331_RS01525 PF01610 Transposase LQ331_RS01530 PF01012 Electron transfer flavoprotein domain LQ331_RS01530 PF00766 Electron transfer flavoprotein FAD-binding domain LQ331_RS01535 PF01012 Electron transfer flavoprotein domain LQ331_RS01540 PF16363 GDP-mannose 4,6 dehydratase LQ331_RS01545 PF00483 Nucleotidyl transferase LQ331_RS01550 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LQ331_RS01555 PF04321 RmlD substrate binding domain LQ331_RS01560 PF00483 Nucleotidyl transferase LQ331_RS01560 PF01050 Mannose-6-phosphate isomerase LQ331_RS01565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQ331_RS01565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQ331_RS01565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQ331_RS01565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQ331_RS01570 PF00176 SNF2 family N-terminal domain LQ331_RS01570 PF00271 Helicase conserved C-terminal domain LQ331_RS01570 PF12419 SNF2 Helicase protein LQ331_RS01575 PF01144 Coenzyme A transferase LQ331_RS01580 PF01144 Coenzyme A transferase LQ331_RS01585 PF14307 Glycosyltransferase WbsX LQ331_RS01585 PF05045 Rhamnan synthesis protein F LQ331_RS01605 PF00005 ABC transporter LQ331_RS01610 PF02405 Permease MlaE LQ331_RS01620 PF00816 H-NS histone family LQ331_RS01625 PF04073 Aminoacyl-tRNA editing domain LQ331_RS01625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQ331_RS01625 PF03129 Anticodon binding domain LQ331_RS01635 PF01066 CDP-alcohol phosphatidyltransferase LQ331_RS01645 PF00583 Acetyltransferase (GNAT) family LQ331_RS01655 PF08264 Anticodon-binding domain of tRNA LQ331_RS01655 PF00133 tRNA synthetases class I (I, L, M and V) LQ331_RS01655 PF10458 Valyl tRNA synthetase tRNA binding arm LQ331_RS01665 PF00883 Cytosol aminopeptidase family, catalytic domain LQ331_RS01665 PF02789 Cytosol aminopeptidase family, N-terminal domain LQ331_RS01675 PF03739 Lipopolysaccharide export system permease LptF/LptG LQ331_RS01690 PF00589 Phage integrase family LQ331_RS01690 PF02899 Phage integrase, N-terminal SAM-like domain LQ331_RS01695 PF10411 Disulfide bond isomerase protein N-terminus LQ331_RS01695 PF13098 Thioredoxin-like domain LQ331_RS01700 PF00553 Cellulose binding domain LQ331_RS01700 PF00041 Fibronectin type III domain LQ331_RS01700 PF00704 Glycosyl hydrolases family 18 LQ331_RS01705 PF02769 AIR synthase related protein, C-terminal domain LQ331_RS01705 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LQ331_RS01705 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LQ331_RS01710 PF03895 YadA-like membrane anchor domain LQ331_RS01710 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ331_RS01710 PF05658 Head domain of trimeric autotransporter adhesin LQ331_RS01710 PF13018 Extended Signal Peptide of Type V secretion system LQ331_RS01715 PF00082 Subtilase family LQ331_RS01715 PF04151 Bacterial pre-peptidase C-terminal domain LQ331_RS01720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ331_RS01720 PF00437 Type II/IV secretion system protein LQ331_RS01725 PF00482 Type II secretion system (T2SS), protein F LQ331_RS01730 PF08334 Type II secretion system (T2SS), protein G LQ331_RS01735 PF12019 Type II transport protein GspH LQ331_RS01740 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS01750 PF03934 Type II secretion system (T2SS), protein K LQ331_RS01755 PF05137 Fimbrial assembly protein (PilN) LQ331_RS01760 PF10741 Type II secretion system (T2SS), protein M subtype b LQ331_RS01770 PF03958 Bacterial type II/III secretion system short domain LQ331_RS01770 PF00263 Bacterial type II and III secretion system protein LQ331_RS01780 PF00535 Glycosyl transferase family 2 LQ331_RS01785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LQ331_RS01785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LQ331_RS01795 PF16970 Type-1 fimbrial protein, A LQ331_RS01800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LQ331_RS01800 PF02753 Pili assembly chaperone PapD, C-terminal domain LQ331_RS01805 PF00577 Outer membrane usher protein LQ331_RS01805 PF13954 PapC N-terminal domain LQ331_RS01805 PF13953 PapC C-terminal domain LQ331_RS01815 PF02350 UDP-N-acetylglucosamine 2-epimerase LQ331_RS01825 PF13632 Glycosyl transferase family group 2 LQ331_RS01825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ331_RS01840 PF00860 Permease family LQ331_RS01845 PF00005 ABC transporter LQ331_RS01845 PF12848 ABC transporter LQ331_RS01855 PF00464 Serine hydroxymethyltransferase LQ331_RS01875 PF03477 ATP cone domain LQ331_RS01880 PF01872 RibD C-terminal domain LQ331_RS01880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQ331_RS01905 PF00677 Lumazine binding domain LQ331_RS01910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQ331_RS01910 PF00925 GTP cyclohydrolase II LQ331_RS01915 PF00885 6,7-dimethyl-8-ribityllumazine synthase LQ331_RS01920 PF01029 NusB family LQ331_RS01925 PF00586 AIR synthase related protein, N-terminal domain LQ331_RS01925 PF02769 AIR synthase related protein, C-terminal domain LQ331_RS01930 PF02753 Pili assembly chaperone PapD, C-terminal domain LQ331_RS01930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LQ331_RS01945 PF00577 Outer membrane usher protein LQ331_RS01945 PF13954 PapC N-terminal domain LQ331_RS01945 PF13953 PapC C-terminal domain LQ331_RS01955 PF01757 Acyltransferase family LQ331_RS01960 PF02913 FAD linked oxidases, C-terminal domain LQ331_RS01960 PF01565 FAD binding domain LQ331_RS01965 PF04307 LexA-binding, inner membrane-associated putative hydrolase LQ331_RS01970 PF02021 Uncharacterised protein family UPF0102 LQ331_RS01980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQ331_RS02000 PF02381 MraZ protein, putative antitoxin-like LQ331_RS02005 PF01795 MraW methylase family LQ331_RS02010 PF04999 Cell division protein FtsL LQ331_RS02015 PF00905 Penicillin binding protein transpeptidase domain LQ331_RS02015 PF03717 Penicillin-binding Protein dimerisation domain LQ331_RS02020 PF08245 Mur ligase middle domain LQ331_RS02020 PF01225 Mur ligase family, catalytic domain LQ331_RS02020 PF02875 Mur ligase family, glutamate ligase domain LQ331_RS02025 PF01225 Mur ligase family, catalytic domain LQ331_RS02025 PF02875 Mur ligase family, glutamate ligase domain LQ331_RS02025 PF08245 Mur ligase middle domain LQ331_RS02030 PF00953 Glycosyl transferase family 4 LQ331_RS02035 PF01098 Cell cycle protein LQ331_RS02040 PF03033 Glycosyltransferase family 28 N-terminal domain LQ331_RS02040 PF04101 Glycosyltransferase family 28 C-terminal domain LQ331_RS02045 PF01225 Mur ligase family, catalytic domain LQ331_RS02045 PF02875 Mur ligase family, glutamate ligase domain LQ331_RS02045 PF08245 Mur ligase middle domain LQ331_RS02050 PF07478 D-ala D-ala ligase C-terminus LQ331_RS02050 PF01820 D-ala D-ala ligase N-terminus LQ331_RS02055 PF03799 Cell division protein FtsQ LQ331_RS02055 PF08478 POTRA domain, FtsQ-type LQ331_RS02060 PF02491 SHS2 domain inserted in FTSA LQ331_RS02065 PF12327 FtsZ family, C-terminal domain LQ331_RS02065 PF00091 Tubulin/FtsZ family, GTPase domain LQ331_RS02070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LQ331_RS02080 PF01476 LysM domain LQ331_RS02080 PF01551 Peptidase family M23 LQ331_RS02080 PF08525 Opacity-associated protein A N-terminal motif LQ331_RS02085 PF07517 SecA DEAD-like domain LQ331_RS02085 PF07516 SecA Wing and Scaffold domain LQ331_RS02085 PF02810 SEC-C motif LQ331_RS02085 PF01043 SecA preprotein cross-linking domain LQ331_RS02090 PF00293 NUDIX domain LQ331_RS02100 PF02219 Methylenetetrahydrofolate reductase LQ331_RS02105 PF00561 alpha/beta hydrolase fold LQ331_RS02110 PF06580 Histidine kinase LQ331_RS02110 PF13492 GAF domain LQ331_RS02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS02110 PF07694 5TMR of 5TMR-LYT LQ331_RS02115 PF04397 LytTr DNA-binding domain LQ331_RS02115 PF00072 Response regulator receiver domain LQ331_RS02120 PF01979 Amidohydrolase family LQ331_RS02135 PF04073 Aminoacyl-tRNA editing domain LQ331_RS02140 PF05221 S-adenosyl-L-homocysteine hydrolase LQ331_RS02140 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LQ331_RS02150 PF00311 Phosphoenolpyruvate carboxylase LQ331_RS02170 PF03061 Thioesterase superfamily LQ331_RS02175 PF02773 S-adenosylmethionine synthetase, C-terminal domain LQ331_RS02175 PF00438 S-adenosylmethionine synthetase, N-terminal domain LQ331_RS02175 PF02772 S-adenosylmethionine synthetase, central domain LQ331_RS02205 PF13847 Methyltransferase domain LQ331_RS02210 PF01207 Dihydrouridine synthase (Dus) LQ331_RS02220 PF03466 LysR substrate binding domain LQ331_RS02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS02225 PF07690 Major Facilitator Superfamily LQ331_RS02230 PF00294 pfkB family carbohydrate kinase LQ331_RS02235 PF07670 Nucleoside recognition LQ331_RS02235 PF07662 Na+ dependent nucleoside transporter C-terminus LQ331_RS02235 PF01773 Na+ dependent nucleoside transporter N-terminus LQ331_RS02240 PF00248 Aldo/keto reductase family LQ331_RS02250 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS02250 PF00593 TonB dependent receptor LQ331_RS02275 PF00005 ABC transporter LQ331_RS02280 PF13472 GDSL-like Lipase/Acylhydrolase family LQ331_RS02285 PF00072 Response regulator receiver domain LQ331_RS02285 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS02290 PF08521 Two-component sensor kinase N-terminal LQ331_RS02290 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS02300 PF01219 Prokaryotic diacylglycerol kinase LQ331_RS02305 PF03741 Integral membrane protein TerC family LQ331_RS02310 PF07690 Major Facilitator Superfamily LQ331_RS02315 PF04011 LemA family LQ331_RS02330 PF01790 Prolipoprotein diacylglyceryl transferase LQ331_RS02335 PF00303 Thymidylate synthase LQ331_RS02340 PF00186 Dihydrofolate reductase LQ331_RS02345 PF06940 Domain of unknown function (DUF1287) LQ331_RS02350 PF00149 Calcineurin-like phosphoesterase LQ331_RS02355 PF04379 ApaG domain LQ331_RS02360 PF00398 Ribosomal RNA adenine dimethylase LQ331_RS02365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LQ331_RS02370 PF00639 PPIC-type PPIASE domain LQ331_RS02370 PF09312 SurA N-terminal domain LQ331_RS02375 PF04453 LPS transport system D LQ331_RS02375 PF03968 OstA-like protein LQ331_RS02380 PF00850 Histone deacetylase domain LQ331_RS02385 PF01923 Cobalamin adenosyltransferase LQ331_RS02395 PF01494 FAD binding domain LQ331_RS02400 PF01494 FAD binding domain LQ331_RS02405 PF13202 EF hand LQ331_RS02405 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQ331_RS02410 PF01728 FtsJ-like methyltransferase LQ331_RS02410 PF18125 RlmM ferredoxin-like domain LQ331_RS02430 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQ331_RS02430 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LQ331_RS02440 PF01625 Peptide methionine sulfoxide reductase LQ331_RS02445 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQ331_RS02450 PF01272 Transcription elongation factor, GreA/GreB, C-term LQ331_RS02450 PF14760 Rnk N-terminus LQ331_RS02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS02455 PF03466 LysR substrate binding domain LQ331_RS02460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS02460 PF13192 Thioredoxin domain LQ331_RS02465 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQ331_RS02465 PF00578 AhpC/TSA family LQ331_RS02470 PF17827 PrmC N-terminal domain LQ331_RS02470 PF05175 Methyltransferase small domain LQ331_RS02475 PF00561 alpha/beta hydrolase fold LQ331_RS02480 PF03466 LysR substrate binding domain LQ331_RS02480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS02485 PF07690 Major Facilitator Superfamily LQ331_RS02495 PF00293 NUDIX domain LQ331_RS02500 PF01612 3'-5' exonuclease LQ331_RS02500 PF00476 DNA polymerase family A LQ331_RS02500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQ331_RS02500 PF01367 5'-3' exonuclease, C-terminal SAM fold LQ331_RS02515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQ331_RS02515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQ331_RS02515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQ331_RS02535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQ331_RS02540 PF02233 NAD(P) transhydrogenase beta subunit LQ331_RS02550 PF01883 Iron-sulfur cluster assembly protein LQ331_RS02555 PF01063 Amino-transferase class IV LQ331_RS02560 PF00082 Subtilase family LQ331_RS02560 PF04151 Bacterial pre-peptidase C-terminal domain LQ331_RS02575 PF03358 NADPH-dependent FMN reductase LQ331_RS02580 PF03631 Virulence factor BrkB LQ331_RS02585 PF00578 AhpC/TSA family LQ331_RS02590 PF03976 Polyphosphate kinase 2 (PPK2) LQ331_RS02600 PF00472 RF-1 domain LQ331_RS02600 PF03462 PCRF domain LQ331_RS02605 PF01488 Shikimate / quinate 5-dehydrogenase LQ331_RS02605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LQ331_RS02605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LQ331_RS02615 PF03550 Outer membrane lipoprotein LolB LQ331_RS02620 PF00288 GHMP kinases N terminal domain LQ331_RS02620 PF08544 GHMP kinases C terminal LQ331_RS02630 PF14572 Phosphoribosyl synthetase-associated domain LQ331_RS02630 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQ331_RS02635 PF01386 Ribosomal L25p family LQ331_RS02635 PF14693 Ribosomal protein TL5, C-terminal domain LQ331_RS02640 PF01195 Peptidyl-tRNA hydrolase LQ331_RS02645 PF01926 50S ribosome-binding GTPase LQ331_RS02645 PF06071 Protein of unknown function (DUF933) LQ331_RS02650 PF12951 Passenger-associated-transport-repeat LQ331_RS02650 PF03797 Autotransporter beta-domain LQ331_RS02655 PF00072 Response regulator receiver domain LQ331_RS02655 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS02660 PF00072 Response regulator receiver domain LQ331_RS02660 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ331_RS02660 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS02665 PF00563 EAL domain LQ331_RS02665 PF01590 GAF domain LQ331_RS02665 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS02665 PF00989 PAS fold LQ331_RS02670 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS02670 PF00072 Response regulator receiver domain LQ331_RS02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS02670 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ331_RS02675 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS02675 PF00593 TonB dependent receptor LQ331_RS02680 PF03575 Peptidase family S51 LQ331_RS02685 PF01112 Asparaginase LQ331_RS02705 PF03143 Elongation factor Tu C-terminal domain LQ331_RS02705 PF03144 Elongation factor Tu domain 2 LQ331_RS02705 PF00009 Elongation factor Tu GTP binding domain LQ331_RS02715 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LQ331_RS02720 PF02357 Transcription termination factor nusG LQ331_RS02720 PF00467 KOW motif LQ331_RS02725 PF00298 Ribosomal protein L11, RNA binding domain LQ331_RS02725 PF03946 Ribosomal protein L11, N-terminal domain LQ331_RS02730 PF00687 Ribosomal protein L1p/L10e family LQ331_RS02735 PF00466 Ribosomal protein L10 LQ331_RS02740 PF16320 Ribosomal protein L7/L12 dimerisation domain LQ331_RS02740 PF00542 Ribosomal protein L7/L12 C-terminal domain LQ331_RS02745 PF04563 RNA polymerase beta subunit LQ331_RS02745 PF04561 RNA polymerase Rpb2, domain 2 LQ331_RS02745 PF04565 RNA polymerase Rpb2, domain 3 LQ331_RS02745 PF10385 RNA polymerase beta subunit external 1 domain LQ331_RS02745 PF00562 RNA polymerase Rpb2, domain 6 LQ331_RS02745 PF04560 RNA polymerase Rpb2, domain 7 LQ331_RS02750 PF00623 RNA polymerase Rpb1, domain 2 LQ331_RS02750 PF04983 RNA polymerase Rpb1, domain 3 LQ331_RS02750 PF04997 RNA polymerase Rpb1, domain 1 LQ331_RS02750 PF04998 RNA polymerase Rpb1, domain 5 LQ331_RS02750 PF05000 RNA polymerase Rpb1, domain 4 LQ331_RS02755 PF00164 Ribosomal protein S12/S23 LQ331_RS02760 PF00177 Ribosomal protein S7p/S5e LQ331_RS02765 PF00679 Elongation factor G C-terminus LQ331_RS02765 PF14492 Elongation Factor G, domain II LQ331_RS02765 PF03764 Elongation factor G, domain IV LQ331_RS02765 PF00009 Elongation factor Tu GTP binding domain LQ331_RS02765 PF03144 Elongation factor Tu domain 2 LQ331_RS02770 PF03143 Elongation factor Tu C-terminal domain LQ331_RS02770 PF03144 Elongation factor Tu domain 2 LQ331_RS02770 PF00009 Elongation factor Tu GTP binding domain LQ331_RS02775 PF00338 Ribosomal protein S10p/S20e LQ331_RS02780 PF00297 Ribosomal protein L3 LQ331_RS02785 PF00573 Ribosomal protein L4/L1 family LQ331_RS02790 PF00276 Ribosomal protein L23 LQ331_RS02795 PF03947 Ribosomal Proteins L2, C-terminal domain LQ331_RS02795 PF00181 Ribosomal Proteins L2, RNA binding domain LQ331_RS02800 PF00203 Ribosomal protein S19 LQ331_RS02805 PF00237 Ribosomal protein L22p/L17e LQ331_RS02810 PF07650 KH domain LQ331_RS02810 PF00189 Ribosomal protein S3, C-terminal domain LQ331_RS02815 PF00252 Ribosomal protein L16p/L10e LQ331_RS02820 PF00831 Ribosomal L29 protein LQ331_RS02825 PF00366 Ribosomal protein S17 LQ331_RS02830 PF00238 Ribosomal protein L14p/L23e LQ331_RS02835 PF00467 KOW motif LQ331_RS02835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LQ331_RS02840 PF00281 Ribosomal protein L5 LQ331_RS02840 PF00673 ribosomal L5P family C-terminus LQ331_RS02845 PF00253 Ribosomal protein S14p/S29e LQ331_RS02850 PF00410 Ribosomal protein S8 LQ331_RS02855 PF00347 Ribosomal protein L6 LQ331_RS02860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LQ331_RS02865 PF03719 Ribosomal protein S5, C-terminal domain LQ331_RS02865 PF00333 Ribosomal protein S5, N-terminal domain LQ331_RS02870 PF00327 Ribosomal protein L30p/L7e LQ331_RS02875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LQ331_RS02880 PF00344 SecY translocase LQ331_RS02885 PF00416 Ribosomal protein S13/S18 LQ331_RS02890 PF00411 Ribosomal protein S11 LQ331_RS02895 PF00163 Ribosomal protein S4/S9 N-terminal domain LQ331_RS02895 PF01479 S4 domain LQ331_RS02900 PF01000 RNA polymerase Rpb3/RpoA insert domain LQ331_RS02900 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LQ331_RS02900 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LQ331_RS02905 PF01196 Ribosomal protein L17 LQ331_RS02910 PF02600 Disulfide bond formation protein DsbB LQ331_RS02920 PF01474 Class-II DAHP synthetase family LQ331_RS02930 PF01425 Amidase LQ331_RS02940 PF00679 Elongation factor G C-terminus LQ331_RS02940 PF00009 Elongation factor Tu GTP binding domain LQ331_RS02940 PF03144 Elongation factor Tu domain 2 LQ331_RS02945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQ331_RS02950 PF00056 lactate/malate dehydrogenase, NAD binding domain LQ331_RS02950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LQ331_RS02955 PF00849 RNA pseudouridylate synthase LQ331_RS02965 PF16177 Acetyl-coenzyme A synthetase N-terminus LQ331_RS02965 PF00501 AMP-binding enzyme LQ331_RS02965 PF13193 AMP-binding enzyme C-terminal domain LQ331_RS02980 PF00043 Glutathione S-transferase, C-terminal domain LQ331_RS02980 PF02798 Glutathione S-transferase, N-terminal domain LQ331_RS02990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ331_RS02990 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS03000 PF00107 Zinc-binding dehydrogenase LQ331_RS03000 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS03005 PF05736 OprF membrane domain LQ331_RS03005 PF00691 OmpA family LQ331_RS03015 PF00849 RNA pseudouridylate synthase LQ331_RS03015 PF01479 S4 domain LQ331_RS03025 PF00155 Aminotransferase class I and II LQ331_RS03035 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS03035 PF00107 Zinc-binding dehydrogenase LQ331_RS03040 PF10459 Peptidase S46 LQ331_RS03045 PF00300 Histidine phosphatase superfamily (branch 1) LQ331_RS03050 PF08245 Mur ligase middle domain LQ331_RS03050 PF02875 Mur ligase family, glutamate ligase domain LQ331_RS03065 PF00156 Phosphoribosyl transferase domain LQ331_RS03070 PF04305 Protein of unknown function (DUF455) LQ331_RS03085 PF00149 Calcineurin-like phosphoesterase LQ331_RS03090 PF01569 PAP2 superfamily LQ331_RS03095 PF13439 Glycosyltransferase Family 4 LQ331_RS03095 PF00534 Glycosyl transferases group 1 LQ331_RS03100 PF00593 TonB dependent receptor LQ331_RS03100 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS03110 PF02541 Ppx/GppA phosphatase family LQ331_RS03115 PF17941 Polyphosphate kinase C-terminal domain 1 LQ331_RS03115 PF13090 Polyphosphate kinase C-terminal domain 2 LQ331_RS03115 PF13089 Polyphosphate kinase N-terminal domain LQ331_RS03115 PF02503 Polyphosphate kinase middle domain LQ331_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS03120 PF11808 Phosphate regulon sensor protein PhoR LQ331_RS03120 PF00989 PAS fold LQ331_RS03120 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS03125 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS03125 PF00072 Response regulator receiver domain LQ331_RS03130 PF07720 Tetratricopeptide repeat LQ331_RS03130 PF01435 Peptidase family M48 LQ331_RS03135 PF00462 Glutaredoxin LQ331_RS03145 PF00180 Isocitrate/isopropylmalate dehydrogenase LQ331_RS03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS03155 PF03466 LysR substrate binding domain LQ331_RS03210 PF05697 Bacterial trigger factor protein (TF) LQ331_RS03210 PF05698 Bacterial trigger factor protein (TF) C-terminus LQ331_RS03215 PF00574 Clp protease LQ331_RS03220 PF06689 ClpX C4-type zinc finger LQ331_RS03220 PF10431 C-terminal, D2-small domain, of ClpB protein LQ331_RS03220 PF07724 AAA domain (Cdc48 subfamily) LQ331_RS03225 PF02190 ATP-dependent protease La (LON) substrate-binding domain LQ331_RS03225 PF05362 Lon protease (S16) C-terminal proteolytic domain LQ331_RS03225 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS03230 PF00216 Bacterial DNA-binding protein LQ331_RS03260 PF05698 Bacterial trigger factor protein (TF) C-terminus LQ331_RS03265 PF05257 CHAP domain LQ331_RS03265 PF01476 LysM domain LQ331_RS03270 PF00753 Metallo-beta-lactamase superfamily LQ331_RS03270 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQ331_RS03280 PF00075 RNase H LQ331_RS03285 PF00929 Exonuclease LQ331_RS03310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQ331_RS03320 PF12706 Beta-lactamase superfamily domain LQ331_RS03335 PF00893 Small Multidrug Resistance protein LQ331_RS03350 PF12158 Protein of unknown function (DUF3592) LQ331_RS03360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LQ331_RS03360 PF12169 DNA polymerase III subunits gamma and tau domain III LQ331_RS03360 PF12170 DNA polymerase III tau subunit V interacting with alpha LQ331_RS03365 PF02575 YbaB/EbfC DNA-binding family LQ331_RS03370 PF02132 RecR protein LQ331_RS03370 PF13662 Toprim domain LQ331_RS03375 PF01230 HIT domain LQ331_RS03385 PF11992 Domain of unknown function (DUF3488) LQ331_RS03385 PF13559 Domain of unknown function (DUF4129) LQ331_RS03385 PF01841 Transglutaminase-like superfamily LQ331_RS03395 PF07726 ATPase family associated with various cellular activities (AAA) LQ331_RS03395 PF17863 AAA lid domain LQ331_RS03405 PF02545 Maf-like protein LQ331_RS03410 PF02620 Large ribosomal RNA subunit accumulation protein YceD LQ331_RS03415 PF01783 Ribosomal L32p protein family LQ331_RS03420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQ331_RS03420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQ331_RS03430 PF00698 Acyl transferase domain LQ331_RS03440 PF00550 Phosphopantetheine attachment site LQ331_RS03445 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ331_RS03445 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ331_RS03450 PF00425 chorismate binding enzyme LQ331_RS03450 PF04715 Anthranilate synthase component I, N terminal region LQ331_RS03455 PF02618 YceG-like family LQ331_RS03460 PF02223 Thymidylate kinase LQ331_RS03465 PF09115 DNA polymerase III, delta subunit, C terminal LQ331_RS03525 PF04984 Phage tail sheath protein subtilisin-like domain LQ331_RS03525 PF17482 Phage tail sheath C-terminal domain LQ331_RS03630 PF00593 TonB dependent receptor LQ331_RS03630 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS03645 PF07690 Major Facilitator Superfamily LQ331_RS03650 PF00455 DeoR C terminal sensor domain LQ331_RS03650 PF08220 DeoR-like helix-turn-helix domain LQ331_RS03655 PF13599 Pentapeptide repeats (9 copies) LQ331_RS03660 PF13649 Methyltransferase domain LQ331_RS03670 PF03466 LysR substrate binding domain LQ331_RS03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS03675 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS03675 PF00155 Aminotransferase class I and II LQ331_RS03680 PF00892 EamA-like transporter family LQ331_RS03685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS03685 PF03466 LysR substrate binding domain LQ331_RS03690 PF07690 Major Facilitator Superfamily LQ331_RS03710 PF07690 Major Facilitator Superfamily LQ331_RS03715 PF09278 MerR, DNA binding LQ331_RS03715 PF00376 MerR family regulatory protein LQ331_RS03725 PF03466 LysR substrate binding domain LQ331_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS03730 PF14748 Pyrroline-5-carboxylate reductase dimerisation LQ331_RS03730 PF03807 NADP oxidoreductase coenzyme F420-dependent LQ331_RS03735 PF01168 Alanine racemase, N-terminal domain LQ331_RS03740 PF00437 Type II/IV secretion system protein LQ331_RS03745 PF00437 Type II/IV secretion system protein LQ331_RS03750 PF00248 Aldo/keto reductase family LQ331_RS03755 PF03466 LysR substrate binding domain LQ331_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS03765 PF00583 Acetyltransferase (GNAT) family LQ331_RS03775 PF03352 Methyladenine glycosylase LQ331_RS03780 PF13687 Domain of unknown function (DUF4153) LQ331_RS03785 PF02622 Uncharacterized ACR, COG1678 LQ331_RS03790 PF03652 Holliday junction resolvase LQ331_RS03795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQ331_RS03795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQ331_RS03815 PF00571 CBS domain LQ331_RS03815 PF01769 Divalent cation transporter LQ331_RS03815 PF03448 MgtE intracellular N domain LQ331_RS03820 PF05524 PEP-utilising enzyme, N-terminal LQ331_RS03820 PF00391 PEP-utilising enzyme, mobile domain LQ331_RS03820 PF02896 PEP-utilising enzyme, TIM barrel domain LQ331_RS03825 PF00381 PTS HPr component phosphorylation site LQ331_RS03835 PF03668 P-loop ATPase protein family LQ331_RS03840 PF07475 HPr Serine kinase C-terminal domain LQ331_RS03840 PF02603 HPr Serine kinase N terminus LQ331_RS03845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQ331_RS03850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LQ331_RS03855 PF04552 Sigma-54, DNA binding domain LQ331_RS03855 PF04963 Sigma-54 factor, core binding domain LQ331_RS03855 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQ331_RS03860 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQ331_RS03860 PF00005 ABC transporter LQ331_RS03880 PF01380 SIS domain LQ331_RS03880 PF00571 CBS domain LQ331_RS03890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQ331_RS03910 PF00551 Formyl transferase LQ331_RS03930 PF00586 AIR synthase related protein, N-terminal domain LQ331_RS03930 PF02769 AIR synthase related protein, C-terminal domain LQ331_RS03940 PF01594 AI-2E family transporter LQ331_RS03945 PF00308 Bacterial dnaA protein LQ331_RS03950 PF00483 Nucleotidyl transferase LQ331_RS03955 PF01636 Phosphotransferase enzyme family LQ331_RS03960 PF04226 Transglycosylase associated protein LQ331_RS03990 PF00667 FAD binding domain LQ331_RS03990 PF00175 Oxidoreductase NAD-binding domain LQ331_RS03990 PF00258 Flavodoxin LQ331_RS03995 PF02424 ApbE family LQ331_RS04015 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS04015 PF00593 TonB dependent receptor LQ331_RS04025 PF13640 2OG-Fe(II) oxygenase superfamily LQ331_RS04025 PF18331 PKHD-type hydroxylase C-terminal domain LQ331_RS04035 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS04035 PF00593 TonB dependent receptor LQ331_RS04045 PF00355 Rieske [2Fe-2S] domain LQ331_RS04060 PF00266 Aminotransferase class-V LQ331_RS04065 PF01458 Uncharacterized protein family (UPF0051) LQ331_RS04070 PF00005 ABC transporter LQ331_RS04080 PF01458 Uncharacterized protein family (UPF0051) LQ331_RS04085 PF02082 Transcriptional regulator LQ331_RS04095 PF01965 DJ-1/PfpI family LQ331_RS04120 PF02566 OsmC-like protein LQ331_RS04125 PF02567 Phenazine biosynthesis-like protein LQ331_RS04130 PF02567 Phenazine biosynthesis-like protein LQ331_RS04135 PF00696 Amino acid kinase family LQ331_RS04135 PF01842 ACT domain LQ331_RS04145 PF08245 Mur ligase middle domain LQ331_RS04160 PF00348 Polyprenyl synthetase LQ331_RS04165 PF00128 Alpha amylase, catalytic domain LQ331_RS04175 PF14508 Glycosyl-hydrolase 97 N-terminal LQ331_RS04175 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LQ331_RS04175 PF10566 Glycoside hydrolase 97 LQ331_RS04185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LQ331_RS04190 PF00128 Alpha amylase, catalytic domain LQ331_RS04190 PF00686 Starch binding domain LQ331_RS04220 PF00005 ABC transporter LQ331_RS04220 PF13732 Domain of unknown function (DUF4162) LQ331_RS04225 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS04230 PF00436 Single-strand binding protein family LQ331_RS04265 PF00732 GMC oxidoreductase LQ331_RS04265 PF05199 GMC oxidoreductase LQ331_RS04280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQ331_RS04280 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LQ331_RS04290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ331_RS04290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQ331_RS04295 PF03825 Nucleoside H+ symporter LQ331_RS04305 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS04310 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS04310 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS04310 PF00563 EAL domain LQ331_RS04320 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS04345 PF01022 Bacterial regulatory protein, arsR family LQ331_RS04360 PF13443 Cro/C1-type HTH DNA-binding domain LQ331_RS04365 PF03741 Integral membrane protein TerC family LQ331_RS04365 PF03471 Transporter associated domain LQ331_RS04365 PF00571 CBS domain LQ331_RS04370 PF00149 Calcineurin-like phosphoesterase LQ331_RS04375 PF01794 Ferric reductase like transmembrane component LQ331_RS04385 PF05114 Protein of unknown function (DUF692) LQ331_RS04395 PF07681 DoxX LQ331_RS04405 PF00578 AhpC/TSA family LQ331_RS04405 PF02683 Cytochrome C biogenesis protein transmembrane region LQ331_RS04405 PF17991 Thioredoxin like C-terminal domain LQ331_RS04410 PF00072 Response regulator receiver domain LQ331_RS04410 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS04415 PF00672 HAMP domain LQ331_RS04415 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS04425 PF08946 Osmosensory transporter coiled coil LQ331_RS04425 PF00083 Sugar (and other) transporter LQ331_RS04430 PF01156 Inosine-uridine preferring nucleoside hydrolase LQ331_RS04440 PF07729 FCD domain LQ331_RS04440 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS04450 PF00698 Acyl transferase domain LQ331_RS04455 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LQ331_RS04460 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LQ331_RS04470 PF01039 Carboxyl transferase domain LQ331_RS04475 PF06857 Malonate decarboxylase delta subunit (MdcD) LQ331_RS04480 PF16957 Malonate decarboxylase, alpha subunit, transporter LQ331_RS04485 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS04485 PF00593 TonB dependent receptor LQ331_RS04485 PF07660 Secretin and TonB N terminus short domain LQ331_RS04490 PF06039 Malate:quinone oxidoreductase (Mqo) LQ331_RS04495 PF13673 Acetyltransferase (GNAT) domain LQ331_RS04500 PF03466 LysR substrate binding domain LQ331_RS04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS04505 PF01810 LysE type translocator LQ331_RS04515 PF00854 POT family LQ331_RS04530 PF03169 OPT oligopeptide transporter protein LQ331_RS04535 PF07676 WD40-like Beta Propeller Repeat LQ331_RS04535 PF00326 Prolyl oligopeptidase family LQ331_RS04535 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LQ331_RS04550 PF03776 Septum formation topological specificity factor MinE LQ331_RS04555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQ331_RS04560 PF05209 Septum formation inhibitor MinC, N-terminal domain LQ331_RS04560 PF03775 Septum formation inhibitor MinC, C-terminal domain LQ331_RS04570 PF07730 Histidine kinase LQ331_RS04575 PF00072 Response regulator receiver domain LQ331_RS04575 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS04615 PF02222 ATP-grasp domain LQ331_RS04615 PF01370 NAD dependent epimerase/dehydratase family LQ331_RS04625 PF04376 Arginine-tRNA-protein transferase, N terminus LQ331_RS04625 PF04377 Arginine-tRNA-protein transferase, C terminus LQ331_RS04635 PF08281 Sigma-70, region 4 LQ331_RS04635 PF04542 Sigma-70 region 2 LQ331_RS04650 PF00378 Enoyl-CoA hydratase/isomerase LQ331_RS04670 PF00005 ABC transporter LQ331_RS04670 PF17755 UvrA DNA-binding domain LQ331_RS04670 PF17760 UvrA interaction domain LQ331_RS04675 PF00829 Ribosomal prokaryotic L21 protein LQ331_RS04680 PF01016 Ribosomal L27 protein LQ331_RS04685 PF01018 GTP1/OBG LQ331_RS04685 PF01926 50S ribosome-binding GTPase LQ331_RS04690 PF01649 Ribosomal protein S20 LQ331_RS04695 PF03023 Lipid II flippase MurJ LQ331_RS04700 PF06574 FAD synthetase LQ331_RS04700 PF01687 Riboflavin kinase LQ331_RS04705 PF08264 Anticodon-binding domain of tRNA LQ331_RS04705 PF00133 tRNA synthetases class I (I, L, M and V) LQ331_RS04705 PF06827 Zinc finger found in FPG and IleRS LQ331_RS04710 PF01252 Signal peptidase (SPase) II LQ331_RS04715 PF02401 LytB protein LQ331_RS04725 PF07947 YhhN family LQ331_RS04740 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS04740 PF00593 TonB dependent receptor LQ331_RS04760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQ331_RS04760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQ331_RS04770 PF03527 RHS protein LQ331_RS04770 PF05593 RHS Repeat LQ331_RS04795 PF06481 COX Aromatic Rich Motif LQ331_RS04795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQ331_RS04800 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQ331_RS04805 PF00510 Cytochrome c oxidase subunit III LQ331_RS04810 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LQ331_RS04815 PF00563 EAL domain LQ331_RS04815 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS04815 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS04820 PF18073 Rubredoxin metal binding domain LQ331_RS04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS04825 PF00183 Hsp90 protein LQ331_RS04845 PF00448 SRP54-type protein, GTPase domain LQ331_RS04845 PF02881 SRP54-type protein, helical bundle domain LQ331_RS04845 PF02978 Signal peptide binding domain LQ331_RS04850 PF03060 Nitronate monooxygenase LQ331_RS04860 PF00886 Ribosomal protein S16 LQ331_RS04865 PF05239 PRC-barrel domain LQ331_RS04865 PF01782 RimM N-terminal domain LQ331_RS04870 PF01746 tRNA (Guanine-1)-methyltransferase LQ331_RS04875 PF01245 Ribosomal protein L19 LQ331_RS04895 PF01554 MatE LQ331_RS04905 PF01479 S4 domain LQ331_RS04915 PF00199 Catalase LQ331_RS04915 PF06628 Catalase-related immune-responsive LQ331_RS04925 PF05190 MutS family domain IV LQ331_RS04925 PF00488 MutS domain V LQ331_RS04925 PF05192 MutS domain III LQ331_RS04925 PF05188 MutS domain II LQ331_RS04925 PF01624 MutS domain I LQ331_RS04945 PF00672 HAMP domain LQ331_RS04945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS04965 PF13533 Biotin-lipoyl like LQ331_RS04975 PF03466 LysR substrate binding domain LQ331_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS04980 PF01810 LysE type translocator LQ331_RS04985 PF00557 Metallopeptidase family M24 LQ331_RS05010 PF00202 Aminotransferase class-III LQ331_RS05020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQ331_RS05025 PF00892 EamA-like transporter family LQ331_RS05030 PF00892 EamA-like transporter family LQ331_RS05035 PF12146 Serine aminopeptidase, S33 LQ331_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS05040 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS05045 PF00072 Response regulator receiver domain LQ331_RS05045 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS05055 PF01638 HxlR-like helix-turn-helix LQ331_RS05060 PF07690 Major Facilitator Superfamily LQ331_RS05065 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05070 PF00593 TonB dependent receptor LQ331_RS05070 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS05080 PF01545 Cation efflux family LQ331_RS05085 PF04493 Endonuclease V LQ331_RS05090 PF00300 Histidine phosphatase superfamily (branch 1) LQ331_RS05095 PF05649 Peptidase family M13 LQ331_RS05095 PF01431 Peptidase family M13 LQ331_RS05100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LQ331_RS05100 PF13542 Helix-turn-helix domain of transposase family ISL3 LQ331_RS05100 PF01610 Transposase LQ331_RS05105 PF00665 Integrase core domain LQ331_RS05110 PF00072 Response regulator receiver domain LQ331_RS05110 PF01966 HD domain LQ331_RS05115 PF02559 CarD-like/TRCF domain LQ331_RS05115 PF00270 DEAD/DEAH box helicase LQ331_RS05115 PF00271 Helicase conserved C-terminal domain LQ331_RS05115 PF03461 TRCF domain LQ331_RS05115 PF17757 UvrB interaction domain LQ331_RS05125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LQ331_RS05130 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS05130 PF00072 Response regulator receiver domain LQ331_RS05135 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS05135 PF00672 HAMP domain LQ331_RS05140 PF06123 Inner membrane protein CreD LQ331_RS05150 PF04389 Peptidase family M28 LQ331_RS05150 PF02225 PA domain LQ331_RS05155 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQ331_RS05160 PF01475 Ferric uptake regulator family LQ331_RS05165 PF13533 Biotin-lipoyl like LQ331_RS05180 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS05180 PF00593 TonB dependent receptor LQ331_RS05200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQ331_RS05200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQ331_RS05205 PF12833 Helix-turn-helix domain LQ331_RS05205 PF06029 AlkA N-terminal domain LQ331_RS05205 PF02805 Metal binding domain of Ada LQ331_RS05205 PF00730 HhH-GPD superfamily base excision DNA repair protein LQ331_RS05225 PF01494 FAD binding domain LQ331_RS05235 PF03880 DbpA RNA binding domain LQ331_RS05235 PF00271 Helicase conserved C-terminal domain LQ331_RS05235 PF00270 DEAD/DEAH box helicase LQ331_RS05240 PF00563 EAL domain LQ331_RS05240 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05240 PF08448 PAS fold LQ331_RS05245 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS05245 PF00563 EAL domain LQ331_RS05245 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05250 PF01479 S4 domain LQ331_RS05250 PF00849 RNA pseudouridylate synthase LQ331_RS05255 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05260 PF02463 RecF/RecN/SMC N terminal domain LQ331_RS05280 PF00144 Beta-lactamase LQ331_RS05280 PF11954 Domain of unknown function (DUF3471) LQ331_RS05285 PF00664 ABC transporter transmembrane region LQ331_RS05285 PF00005 ABC transporter LQ331_RS05290 PF00328 Histidine phosphatase superfamily (branch 2) LQ331_RS05295 PF05426 Alginate lyase LQ331_RS05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS05320 PF03466 LysR substrate binding domain LQ331_RS05330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQ331_RS05335 PF03551 Transcriptional regulator PadR-like family LQ331_RS05355 PF03653 Uncharacterised protein family (UPF0093) LQ331_RS05360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LQ331_RS05370 PF02811 PHP domain LQ331_RS05370 PF01336 OB-fold nucleic acid binding domain LQ331_RS05370 PF14579 Helix-hairpin-helix motif LQ331_RS05370 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQ331_RS05370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQ331_RS05375 PF01351 Ribonuclease HII LQ331_RS05380 PF02684 Lipid-A-disaccharide synthetase LQ331_RS05385 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LQ331_RS05385 PF00132 Bacterial transferase hexapeptide (six repeats) LQ331_RS05390 PF07977 FabA-like domain LQ331_RS05395 PF00132 Bacterial transferase hexapeptide (six repeats) LQ331_RS05395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LQ331_RS05400 PF01103 Surface antigen LQ331_RS05400 PF07244 Surface antigen variable number repeat LQ331_RS05405 PF17820 PDZ domain LQ331_RS05405 PF02163 Peptidase family M50 LQ331_RS05410 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LQ331_RS05410 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LQ331_RS05410 PF13288 DXP reductoisomerase C-terminal domain LQ331_RS05420 PF01255 Putative undecaprenyl diphosphate synthase LQ331_RS05425 PF01765 Ribosome recycling factor LQ331_RS05430 PF00696 Amino acid kinase family LQ331_RS05435 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05440 PF00889 Elongation factor TS LQ331_RS05445 PF00318 Ribosomal protein S2 LQ331_RS05465 PF00577 Outer membrane usher protein LQ331_RS05465 PF13954 PapC N-terminal domain LQ331_RS05465 PF13953 PapC C-terminal domain LQ331_RS05480 PF00557 Metallopeptidase family M24 LQ331_RS05485 PF08335 GlnD PII-uridylyltransferase LQ331_RS05485 PF01966 HD domain LQ331_RS05485 PF01909 Nucleotidyltransferase domain LQ331_RS05490 PF00132 Bacterial transferase hexapeptide (six repeats) LQ331_RS05490 PF14602 Hexapeptide repeat of succinyl-transferase LQ331_RS05490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LQ331_RS05500 PF03960 ArsC family LQ331_RS05505 PF07687 Peptidase dimerisation domain LQ331_RS05505 PF01546 Peptidase family M20/M25/M40 LQ331_RS05510 PF00733 Asparagine synthase LQ331_RS05510 PF13537 Glutamine amidotransferase domain LQ331_RS05515 PF00999 Sodium/hydrogen exchanger family LQ331_RS05520 PF01804 Penicillin amidase LQ331_RS05525 PF00210 Ferritin-like domain LQ331_RS05530 PF03989 DNA gyrase C-terminal domain, beta-propeller LQ331_RS05530 PF00521 DNA gyrase/topoisomerase IV, subunit A LQ331_RS05535 PF12833 Helix-turn-helix domain LQ331_RS05545 PF02321 Outer membrane efflux protein LQ331_RS05550 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS05550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS05555 PF07690 Major Facilitator Superfamily LQ331_RS05570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS05570 PF03466 LysR substrate binding domain LQ331_RS05590 PF17876 Cold shock domain LQ331_RS05590 PF08461 Ribonuclease R winged-helix domain LQ331_RS05590 PF08206 Ribonuclease B OB domain LQ331_RS05590 PF00773 RNB domain LQ331_RS05590 PF00575 S1 RNA binding domain LQ331_RS05600 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQ331_RS05600 PF00588 SpoU rRNA Methylase family LQ331_RS05610 PF02321 Outer membrane efflux protein LQ331_RS05615 PF00005 ABC transporter LQ331_RS05615 PF02687 FtsX-like permease family LQ331_RS05615 PF12704 MacB-like periplasmic core domain LQ331_RS05620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS05625 PF00072 Response regulator receiver domain LQ331_RS05625 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS05630 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS05630 PF00672 HAMP domain LQ331_RS05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS05635 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05640 PF00929 Exonuclease LQ331_RS05645 PF07681 DoxX LQ331_RS05655 PF05114 Protein of unknown function (DUF692) LQ331_RS05665 PF01895 PhoU domain LQ331_RS05670 PF00005 ABC transporter LQ331_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS05685 PF12849 PBP superfamily domain LQ331_RS05690 PF12849 PBP superfamily domain LQ331_RS05700 PF10576 Iron-sulfur binding domain of endonuclease III LQ331_RS05700 PF00730 HhH-GPD superfamily base excision DNA repair protein LQ331_RS05700 PF00633 Helix-hairpin-helix motif LQ331_RS05710 PF00378 Enoyl-CoA hydratase/isomerase LQ331_RS05715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQ331_RS05715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ331_RS05720 PF00293 NUDIX domain LQ331_RS05725 PF00581 Rhodanese-like domain LQ331_RS05740 PF02926 THUMP domain LQ331_RS05740 PF01170 Putative RNA methylase family UPF0020 LQ331_RS05740 PF10672 S-adenosylmethionine-dependent methyltransferase LQ331_RS05760 PF04286 Protein of unknown function (DUF445) LQ331_RS05770 PF00202 Aminotransferase class-III LQ331_RS05775 PF00171 Aldehyde dehydrogenase family LQ331_RS05785 PF00083 Sugar (and other) transporter LQ331_RS05785 PF07690 Major Facilitator Superfamily LQ331_RS05790 PF01814 Hemerythrin HHE cation binding domain LQ331_RS05795 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS05795 PF00072 Response regulator receiver domain LQ331_RS05810 PF01266 FAD dependent oxidoreductase LQ331_RS05815 PF07722 Peptidase C26 LQ331_RS05820 PF00120 Glutamine synthetase, catalytic domain LQ331_RS05825 PF13416 Bacterial extracellular solute-binding protein LQ331_RS05835 PF08402 TOBE domain LQ331_RS05835 PF00005 ABC transporter LQ331_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS05850 PF00171 Aldehyde dehydrogenase family LQ331_RS05865 PF00571 CBS domain LQ331_RS05865 PF03471 Transporter associated domain LQ331_RS05885 PF02130 Uncharacterized protein family UPF0054 LQ331_RS05890 PF02562 PhoH-like protein LQ331_RS05900 PF00005 ABC transporter LQ331_RS05910 PF01938 TRAM domain LQ331_RS05910 PF00919 Uncharacterized protein family UPF0004 LQ331_RS05910 PF04055 Radical SAM superfamily LQ331_RS05915 PF13417 Glutathione S-transferase, N-terminal domain LQ331_RS05925 PF01464 Transglycosylase SLT domain LQ331_RS05930 PF00355 Rieske [2Fe-2S] domain LQ331_RS05930 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LQ331_RS05935 PF00032 Cytochrome b(C-terminal)/b6/petD LQ331_RS05935 PF00033 Cytochrome b/b6/petB LQ331_RS05940 PF02167 Cytochrome C1 family LQ331_RS05945 PF02798 Glutathione S-transferase, N-terminal domain LQ331_RS05945 PF00043 Glutathione S-transferase, C-terminal domain LQ331_RS05950 PF04386 Stringent starvation protein B LQ331_RS05965 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LQ331_RS05965 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LQ331_RS05975 PF00731 AIR carboxylase LQ331_RS05980 PF02222 ATP-grasp domain LQ331_RS05980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LQ331_RS05985 PF02627 Carboxymuconolactone decarboxylase family LQ331_RS05990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQ331_RS05990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQ331_RS05995 PF00462 Glutaredoxin LQ331_RS06005 PF00593 TonB dependent receptor LQ331_RS06010 PF03641 Possible lysine decarboxylase LQ331_RS06010 PF11892 Domain of unknown function (DUF3412) LQ331_RS06010 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LQ331_RS06035 PF05567 Neisseria PilC beta-propeller domain LQ331_RS06040 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS06040 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LQ331_RS06050 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS06050 PF12019 Type II transport protein GspH LQ331_RS06055 PF17757 UvrB interaction domain LQ331_RS06055 PF12344 Ultra-violet resistance protein B LQ331_RS06055 PF02151 UvrB/uvrC motif LQ331_RS06055 PF04851 Type III restriction enzyme, res subunit LQ331_RS06055 PF00271 Helicase conserved C-terminal domain LQ331_RS06095 PF06629 MltA-interacting protein MipA LQ331_RS06100 PF00072 Response regulator receiver domain LQ331_RS06100 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS06105 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS06115 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS06125 PF00664 ABC transporter transmembrane region LQ331_RS06125 PF00005 ABC transporter LQ331_RS06130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LQ331_RS06135 PF02348 Cytidylyltransferase LQ331_RS06140 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQ331_RS06150 PF08459 UvrC Helix-hairpin-helix N-terminal LQ331_RS06150 PF02151 UvrB/uvrC motif LQ331_RS06150 PF01541 GIY-YIG catalytic domain LQ331_RS06155 PF01066 CDP-alcohol phosphatidyltransferase LQ331_RS06175 PF02321 Outer membrane efflux protein LQ331_RS06185 PF00005 ABC transporter LQ331_RS06185 PF02687 FtsX-like permease family LQ331_RS06185 PF12704 MacB-like periplasmic core domain LQ331_RS06235 PF13344 Haloacid dehalogenase-like hydrolase LQ331_RS06235 PF00293 NUDIX domain LQ331_RS06255 PF01613 Flavin reductase like domain LQ331_RS06280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS06280 PF03466 LysR substrate binding domain LQ331_RS06285 PF00248 Aldo/keto reductase family LQ331_RS06300 PF02311 AraC-like ligand binding domain LQ331_RS06300 PF12833 Helix-turn-helix domain LQ331_RS06305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LQ331_RS06325 PF13746 4Fe-4S dicluster domain LQ331_RS06325 PF12801 4Fe-4S binding domain LQ331_RS06325 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LQ331_RS06340 PF06969 HemN C-terminal domain LQ331_RS06340 PF04055 Radical SAM superfamily LQ331_RS06355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQ331_RS06355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQ331_RS06355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQ331_RS06360 PF01645 Conserved region in glutamate synthase LQ331_RS06365 PF13673 Acetyltransferase (GNAT) domain LQ331_RS06370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQ331_RS06370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS06375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ331_RS06385 PF00581 Rhodanese-like domain LQ331_RS06385 PF17773 UPF0176 acylphosphatase like domain LQ331_RS06390 PF00296 Luciferase-like monooxygenase LQ331_RS06405 PF03471 Transporter associated domain LQ331_RS06405 PF00571 CBS domain LQ331_RS06405 PF01595 Cyclin M transmembrane N-terminal domain LQ331_RS06415 PF01384 Phosphate transporter family LQ331_RS06425 PF13302 Acetyltransferase (GNAT) domain LQ331_RS06430 PF00204 DNA gyrase B LQ331_RS06430 PF00986 DNA gyrase B subunit, carboxyl terminus LQ331_RS06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS06430 PF01751 Toprim domain LQ331_RS06440 PF06418 CTP synthase N-terminus LQ331_RS06440 PF00117 Glutamine amidotransferase class-I LQ331_RS06445 PF00793 DAHP synthetase I family LQ331_RS06460 PF03952 Enolase, N-terminal domain LQ331_RS06460 PF00113 Enolase, C-terminal TIM barrel domain LQ331_RS06465 PF04977 Septum formation initiator LQ331_RS06470 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LQ331_RS06475 PF02542 YgbB family LQ331_RS06480 PF01142 tRNA pseudouridine synthase D (TruD) LQ331_RS06485 PF01713 Smr domain LQ331_RS06490 PF01975 Survival protein SurE LQ331_RS06505 PF01476 LysM domain LQ331_RS06505 PF01551 Peptidase family M23 LQ331_RS06515 PF04430 Protein of unknown function (DUF498/DUF598) LQ331_RS06520 PF01985 CRS1 / YhbY (CRM) domain LQ331_RS06525 PF01728 FtsJ-like methyltransferase LQ331_RS06530 PF17862 AAA+ lid domain LQ331_RS06530 PF06480 FtsH Extracellular LQ331_RS06530 PF01434 Peptidase family M41 LQ331_RS06530 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS06540 PF00809 Pterin binding enzyme LQ331_RS06550 PF17209 Hfq protein LQ331_RS06555 PF16360 GTP-binding GTPase Middle Region LQ331_RS06555 PF13167 GTP-binding GTPase N-terminal LQ331_RS06555 PF01926 50S ribosome-binding GTPase LQ331_RS06560 PF02464 Competence-damaged protein LQ331_RS06565 PF03109 ABC1 family LQ331_RS06570 PF00717 Peptidase S24-like LQ331_RS06570 PF01726 LexA DNA binding domain LQ331_RS06575 PF00154 recA bacterial DNA recombination protein LQ331_RS06580 PF02631 RecX family LQ331_RS06585 PF02272 DHHA1 domain LQ331_RS06585 PF01411 tRNA synthetases class II (A) LQ331_RS06585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQ331_RS06590 PF02599 Global regulator protein family LQ331_RS06615 PF17831 Pyruvate dehydrogenase E1 component middle domain LQ331_RS06615 PF00456 Transketolase, thiamine diphosphate binding domain LQ331_RS06640 PF09423 PhoD-like phosphatase LQ331_RS06640 PF16655 PhoD-like phosphatase, N-terminal domain LQ331_RS06645 PF05506 Domain of unknown function (DUF756) LQ331_RS06645 PF04185 Phosphoesterase family LQ331_RS06650 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS06650 PF00593 TonB dependent receptor LQ331_RS06655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQ331_RS06660 PF00034 Cytochrome c LQ331_RS06660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQ331_RS06670 PF07690 Major Facilitator Superfamily LQ331_RS06680 PF07660 Secretin and TonB N terminus short domain LQ331_RS06680 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS06680 PF00593 TonB dependent receptor LQ331_RS06685 PF17954 Quercetinase C-terminal cupin domain LQ331_RS06685 PF02678 Pirin LQ331_RS06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS06690 PF03466 LysR substrate binding domain LQ331_RS06715 PF02581 Thiamine monophosphate synthase LQ331_RS06715 PF08543 Phosphomethylpyrimidine kinase LQ331_RS06730 PF02562 PhoH-like protein LQ331_RS06730 PF13638 PIN domain LQ331_RS06735 PF00578 AhpC/TSA family LQ331_RS06745 PF00701 Dihydrodipicolinate synthetase family LQ331_RS06755 PF11953 Domain of unknown function (DUF3470) LQ331_RS06755 PF00037 4Fe-4S binding domain LQ331_RS06760 PF00083 Sugar (and other) transporter LQ331_RS06770 PF01743 Poly A polymerase head domain LQ331_RS06770 PF12626 Polymerase A arginine-rich C-terminus LQ331_RS06770 PF12627 Probable RNA and SrmB- binding site of polymerase A LQ331_RS06775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQ331_RS06780 PF02548 Ketopantoate hydroxymethyltransferase LQ331_RS06785 PF02569 Pantoate-beta-alanine ligase LQ331_RS06795 PF02261 Aspartate decarboxylase LQ331_RS06800 PF00342 Phosphoglucose isomerase LQ331_RS06805 PF02954 Bacterial regulatory protein, Fis family LQ331_RS06805 PF00072 Response regulator receiver domain LQ331_RS06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS06810 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS06815 PF04551 GcpE protein LQ331_RS06820 PF01569 PAP2 superfamily LQ331_RS06825 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS06825 PF00072 Response regulator receiver domain LQ331_RS06830 PF01081 KDPG and KHG aldolase LQ331_RS06835 PF00920 Dehydratase family LQ331_RS06840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LQ331_RS06845 PF02685 Glucokinase LQ331_RS06850 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LQ331_RS06850 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LQ331_RS06855 PF17912 MalK OB fold domain LQ331_RS06855 PF00005 ABC transporter LQ331_RS06870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQ331_RS06875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQ331_RS06880 PF00890 FAD binding domain LQ331_RS06880 PF02910 Fumarate reductase flavoprotein C-term LQ331_RS06885 PF13085 2Fe-2S iron-sulfur cluster binding domain LQ331_RS06885 PF13237 4Fe-4S dicluster domain LQ331_RS06890 PF03937 Flavinator of succinate dehydrogenase LQ331_RS06900 PF02687 FtsX-like permease family LQ331_RS06900 PF12704 MacB-like periplasmic core domain LQ331_RS06905 PF00005 ABC transporter LQ331_RS06915 PF04362 Bacterial Fe(2+) trafficking LQ331_RS06920 PF14815 NUDIX domain LQ331_RS06920 PF00730 HhH-GPD superfamily base excision DNA repair protein LQ331_RS06920 PF00633 Helix-hairpin-helix motif LQ331_RS06925 PF00448 SRP54-type protein, GTPase domain LQ331_RS06925 PF02881 SRP54-type protein, helical bundle domain LQ331_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS06935 PF00183 Hsp90 protein LQ331_RS06945 PF01467 Cytidylyltransferase-like LQ331_RS06955 PF00037 4Fe-4S binding domain LQ331_RS06965 PF00753 Metallo-beta-lactamase superfamily LQ331_RS07005 PF00719 Inorganic pyrophosphatase LQ331_RS07015 PF00875 DNA photolyase LQ331_RS07015 PF03441 FAD binding domain of DNA photolyase LQ331_RS07020 PF00691 OmpA family LQ331_RS07020 PF13488 Glycine zipper LQ331_RS07025 PF03466 LysR substrate binding domain LQ331_RS07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS07040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS07045 PF00873 AcrB/AcrD/AcrF family LQ331_RS07050 PF00106 short chain dehydrogenase LQ331_RS07055 PF02321 Outer membrane efflux protein LQ331_RS07175 PF04381 Putative exonuclease, RdgC LQ331_RS07495 PF01668 SmpB protein LQ331_RS07500 PF03364 Polyketide cyclase / dehydrase and lipid transport LQ331_RS07505 PF03658 RnfH family Ubiquitin LQ331_RS07510 PF04355 SmpA / OmlA family LQ331_RS07515 PF01475 Ferric uptake regulator family LQ331_RS07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS07525 PF03466 LysR substrate binding domain LQ331_RS07530 PF02463 RecF/RecN/SMC N terminal domain LQ331_RS07535 PF01628 HrcA protein C terminal domain LQ331_RS07535 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LQ331_RS07540 PF01025 GrpE LQ331_RS07545 PF00012 Hsp70 protein LQ331_RS07550 PF00684 DnaJ central domain LQ331_RS07550 PF00226 DnaJ domain LQ331_RS07550 PF01556 DnaJ C terminal domain LQ331_RS07555 PF12833 Helix-turn-helix domain LQ331_RS07555 PF02311 AraC-like ligand binding domain LQ331_RS07560 PF07690 Major Facilitator Superfamily LQ331_RS07565 PF08543 Phosphomethylpyrimidine kinase LQ331_RS07570 PF01817 Chorismate mutase type II LQ331_RS07570 PF02153 Prephenate dehydrogenase LQ331_RS07580 PF00664 ABC transporter transmembrane region LQ331_RS07580 PF00005 ABC transporter LQ331_RS07585 PF01205 Uncharacterized protein family UPF0029 LQ331_RS07595 PF04545 Sigma-70, region 4 LQ331_RS07595 PF04542 Sigma-70 region 2 LQ331_RS07600 PF00563 EAL domain LQ331_RS07600 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS07600 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS07605 PF03641 Possible lysine decarboxylase LQ331_RS07610 PF00202 Aminotransferase class-III LQ331_RS07615 PF02547 Queuosine biosynthesis protein LQ331_RS07625 PF01702 Queuine tRNA-ribosyltransferase LQ331_RS07630 PF02699 Preprotein translocase subunit LQ331_RS07635 PF02355 Protein export membrane protein LQ331_RS07635 PF13721 SecD export protein N-terminal TM region LQ331_RS07635 PF07549 SecD/SecF GG Motif LQ331_RS07640 PF02355 Protein export membrane protein LQ331_RS07640 PF07549 SecD/SecF GG Motif LQ331_RS07645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LQ331_RS07645 PF07055 Enoyl reductase FAD binding domain LQ331_RS07645 PF12241 Trans-2-enoyl-CoA reductase catalytic region LQ331_RS07650 PF00563 EAL domain LQ331_RS07650 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS07650 PF00072 Response regulator receiver domain LQ331_RS07660 PF07152 YaeQ protein LQ331_RS07665 PF00849 RNA pseudouridylate synthase LQ331_RS07670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LQ331_RS07675 PF00313 'Cold-shock' DNA-binding domain LQ331_RS07680 PF02798 Glutathione S-transferase, N-terminal domain LQ331_RS07685 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LQ331_RS07690 PF00156 Phosphoribosyl transferase domain LQ331_RS07695 PF03880 DbpA RNA binding domain LQ331_RS07695 PF00270 DEAD/DEAH box helicase LQ331_RS07695 PF00271 Helicase conserved C-terminal domain LQ331_RS07700 PF03601 Conserved hypothetical protein 698 LQ331_RS07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS07705 PF03466 LysR substrate binding domain LQ331_RS07710 PF00005 ABC transporter LQ331_RS07710 PF16326 ABC transporter C-terminal domain LQ331_RS07710 PF12848 ABC transporter LQ331_RS07715 PF00034 Cytochrome c LQ331_RS07725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS07730 PF00873 AcrB/AcrD/AcrF family LQ331_RS07735 PF00873 AcrB/AcrD/AcrF family LQ331_RS07750 PF00795 Carbon-nitrogen hydrolase LQ331_RS07755 PF04371 Porphyromonas-type peptidyl-arginine deiminase LQ331_RS07765 PF00444 Ribosomal protein L36 LQ331_RS07770 PF02224 Cytidylate kinase LQ331_RS07775 PF00575 S1 RNA binding domain LQ331_RS07780 PF00216 Bacterial DNA-binding protein LQ331_RS07790 PF18073 Rubredoxin metal binding domain LQ331_RS07795 PF00953 Glycosyl transferase family 4 LQ331_RS07800 PF02719 Polysaccharide biosynthesis protein LQ331_RS07805 PF00483 Nucleotidyl transferase LQ331_RS07810 PF02803 Thiolase, C-terminal domain LQ331_RS07810 PF00108 Thiolase, N-terminal domain LQ331_RS07815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQ331_RS07815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQ331_RS07815 PF00378 Enoyl-CoA hydratase/isomerase LQ331_RS07825 PF00334 Nucleoside diphosphate kinase LQ331_RS07830 PF04055 Radical SAM superfamily LQ331_RS07840 PF13464 Domain of unknown function (DUF4115) LQ331_RS07840 PF13464 Domain of unknown function (DUF4115) LQ331_RS07850 PF01011 PQQ enzyme repeat LQ331_RS07850 PF13360 PQQ-like domain LQ331_RS07855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LQ331_RS07855 PF01926 50S ribosome-binding GTPase LQ331_RS07875 PF00899 ThiF family LQ331_RS07880 PF00999 Sodium/hydrogen exchanger family LQ331_RS07880 PF02254 TrkA-N domain LQ331_RS07885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LQ331_RS07885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LQ331_RS07890 PF00478 IMP dehydrogenase / GMP reductase domain LQ331_RS07890 PF00571 CBS domain LQ331_RS07895 PF00117 Glutamine amidotransferase class-I LQ331_RS07895 PF00958 GMP synthase C terminal domain LQ331_RS07895 PF02540 NAD synthase LQ331_RS07920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS07920 PF03466 LysR substrate binding domain LQ331_RS07940 PF00106 short chain dehydrogenase LQ331_RS07965 PF01022 Bacterial regulatory protein, arsR family LQ331_RS07980 PF06100 MCRA family LQ331_RS08005 PF01965 DJ-1/PfpI family LQ331_RS08010 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS08010 PF00593 TonB dependent receptor LQ331_RS08015 PF03358 NADPH-dependent FMN reductase LQ331_RS08025 PF00296 Luciferase-like monooxygenase LQ331_RS08030 PF00296 Luciferase-like monooxygenase LQ331_RS08035 PF01546 Peptidase family M20/M25/M40 LQ331_RS08035 PF07687 Peptidase dimerisation domain LQ331_RS08040 PF00583 Acetyltransferase (GNAT) family LQ331_RS08055 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQ331_RS08070 PF12706 Beta-lactamase superfamily domain LQ331_RS08075 PF08361 MAATS-type transcriptional repressor, C-terminal region LQ331_RS08075 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS08080 PF00563 EAL domain LQ331_RS08080 PF12792 CSS motif domain associated with EAL LQ331_RS08085 PF03466 LysR substrate binding domain LQ331_RS08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS08090 PF07690 Major Facilitator Superfamily LQ331_RS08095 PF00106 short chain dehydrogenase LQ331_RS08105 PF00581 Rhodanese-like domain LQ331_RS08115 PF01636 Phosphotransferase enzyme family LQ331_RS08125 PF17932 Tetracyclin repressor-like, C-terminal domain LQ331_RS08125 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS08140 PF00665 Integrase core domain LQ331_RS08145 PF00892 EamA-like transporter family LQ331_RS08150 PF01565 FAD binding domain LQ331_RS08150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LQ331_RS08155 PF01180 Dihydroorotate dehydrogenase LQ331_RS08175 PF00171 Aldehyde dehydrogenase family LQ331_RS08320 PF00072 Response regulator receiver domain LQ331_RS08320 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS08325 PF13426 PAS domain LQ331_RS08325 PF00072 Response regulator receiver domain LQ331_RS08330 PF00072 Response regulator receiver domain LQ331_RS08330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQ331_RS08330 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS08330 PF01627 Hpt domain LQ331_RS08330 PF00672 HAMP domain LQ331_RS08335 PF01739 CheR methyltransferase, SAM binding domain LQ331_RS08335 PF03705 CheR methyltransferase, all-alpha domain LQ331_RS08340 PF01339 CheB methylesterase LQ331_RS08345 PF00072 Response regulator receiver domain LQ331_RS08345 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS08350 PF01022 Bacterial regulatory protein, arsR family LQ331_RS08355 PF04143 Sulphur transport LQ331_RS08390 PF13840 ACT domain LQ331_RS08390 PF01842 ACT domain LQ331_RS08390 PF00742 Homoserine dehydrogenase LQ331_RS08390 PF03447 Homoserine dehydrogenase, NAD binding domain LQ331_RS08390 PF00696 Amino acid kinase family LQ331_RS08395 PF08544 GHMP kinases C terminal LQ331_RS08395 PF00288 GHMP kinases N terminal domain LQ331_RS08400 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS08400 PF14821 Threonine synthase N terminus LQ331_RS08405 PF00027 Cyclic nucleotide-binding domain LQ331_RS08405 PF13545 Crp-like helix-turn-helix domain LQ331_RS08410 PF03129 Anticodon binding domain LQ331_RS08410 PF13393 Histidyl-tRNA synthetase LQ331_RS08420 PF08029 HisG, C-terminal domain LQ331_RS08420 PF01634 ATP phosphoribosyltransferase LQ331_RS08425 PF00815 Histidinol dehydrogenase LQ331_RS08430 PF00155 Aminotransferase class I and II LQ331_RS08435 PF00475 Imidazoleglycerol-phosphate dehydratase LQ331_RS08435 PF08645 Polynucleotide kinase 3 phosphatase LQ331_RS08440 PF00117 Glutamine amidotransferase class-I LQ331_RS08445 PF00977 Histidine biosynthesis protein LQ331_RS08450 PF00977 Histidine biosynthesis protein LQ331_RS08455 PF01502 Phosphoribosyl-AMP cyclohydrolase LQ331_RS08455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LQ331_RS08470 PF02685 Glucokinase LQ331_RS08475 PF01112 Asparaginase LQ331_RS08480 PF03932 CutC family LQ331_RS08485 PF00593 TonB dependent receptor LQ331_RS08485 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS08490 PF00403 Heavy-metal-associated domain LQ331_RS08495 PF00376 MerR family regulatory protein LQ331_RS08495 PF09278 MerR, DNA binding LQ331_RS08510 PF07971 Glycosyl hydrolase family 92 LQ331_RS08510 PF17678 Glycosyl hydrolase family 92 N-terminal domain LQ331_RS08515 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS08520 PF07690 Major Facilitator Superfamily LQ331_RS08525 PF00294 pfkB family carbohydrate kinase LQ331_RS08545 PF03079 ARD/ARD' family LQ331_RS08550 PF00596 Class II Aldolase and Adducin N-terminal domain LQ331_RS08565 PF13520 Amino acid permease LQ331_RS08570 PF13520 Amino acid permease LQ331_RS08580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQ331_RS08580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQ331_RS08585 PF01565 FAD binding domain LQ331_RS08585 PF02913 FAD linked oxidases, C-terminal domain LQ331_RS08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS08600 PF00672 HAMP domain LQ331_RS08600 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS08605 PF00072 Response regulator receiver domain LQ331_RS08605 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS08610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS08610 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS08615 PF00873 AcrB/AcrD/AcrF family LQ331_RS08630 PF09285 Elongation factor P, C-terminal LQ331_RS08630 PF08207 Elongation factor P (EF-P) KOW-like domain LQ331_RS08630 PF01132 Elongation factor P (EF-P) OB domain LQ331_RS08635 PF00106 short chain dehydrogenase LQ331_RS08640 PF00682 HMGL-like LQ331_RS08650 PF00378 Enoyl-CoA hydratase/isomerase LQ331_RS08650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQ331_RS08650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQ331_RS08660 PF02421 Ferrous iron transport protein B LQ331_RS08660 PF07670 Nucleoside recognition LQ331_RS08660 PF07664 Ferrous iron transport protein B C terminus LQ331_RS08675 PF02525 Flavodoxin-like fold LQ331_RS08690 PF05173 Dihydrodipicolinate reductase, C-terminus LQ331_RS08690 PF01113 Dihydrodipicolinate reductase, N-terminus LQ331_RS08695 PF00117 Glutamine amidotransferase class-I LQ331_RS08695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LQ331_RS08700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQ331_RS08700 PF02142 MGS-like domain LQ331_RS08700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LQ331_RS08705 PF01272 Transcription elongation factor, GreA/GreB, C-term LQ331_RS08705 PF03449 Transcription elongation factor, N-terminal LQ331_RS08720 PF17768 RecJ OB domain LQ331_RS08720 PF02272 DHHA1 domain LQ331_RS08720 PF01368 DHH family LQ331_RS08725 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) LQ331_RS08740 PF04397 LytTr DNA-binding domain LQ331_RS08740 PF00072 Response regulator receiver domain LQ331_RS08755 PF00171 Aldehyde dehydrogenase family LQ331_RS08765 PF01336 OB-fold nucleic acid binding domain LQ331_RS08765 PF00152 tRNA synthetases class II (D, K and N) LQ331_RS08770 PF00072 Response regulator receiver domain LQ331_RS08775 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS08775 PF01627 Hpt domain LQ331_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS08775 PF00072 Response regulator receiver domain LQ331_RS08780 PF00378 Enoyl-CoA hydratase/isomerase LQ331_RS08785 PF13193 AMP-binding enzyme C-terminal domain LQ331_RS08785 PF00501 AMP-binding enzyme LQ331_RS08790 PF00732 GMC oxidoreductase LQ331_RS08790 PF05199 GMC oxidoreductase LQ331_RS08795 PF00171 Aldehyde dehydrogenase family LQ331_RS08800 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS08800 PF13977 BetI-type transcriptional repressor, C-terminal LQ331_RS08805 PF02028 BCCT, betaine/carnitine/choline family transporter LQ331_RS08810 PF00694 Aconitase C-terminal domain LQ331_RS08810 PF00330 Aconitase family (aconitate hydratase) LQ331_RS08830 PF06434 Aconitate hydratase 2 N-terminus LQ331_RS08830 PF00330 Aconitase family (aconitate hydratase) LQ331_RS08830 PF11791 Aconitate B N-terminal domain LQ331_RS08845 PF01339 CheB methylesterase LQ331_RS08845 PF00072 Response regulator receiver domain LQ331_RS08850 PF03975 CheD chemotactic sensory transduction LQ331_RS08855 PF01739 CheR methyltransferase, SAM binding domain LQ331_RS08855 PF03705 CheR methyltransferase, all-alpha domain LQ331_RS08860 PF02203 Tar ligand binding domain homologue LQ331_RS08860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS08860 PF00672 HAMP domain LQ331_RS08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS08865 PF00672 HAMP domain LQ331_RS08865 PF02203 Tar ligand binding domain homologue LQ331_RS08875 PF01584 CheW-like domain LQ331_RS08880 PF07317 Flagellar regulator YcgR LQ331_RS08880 PF07238 PilZ domain LQ331_RS08885 PF02203 Tar ligand binding domain homologue LQ331_RS08885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS08885 PF00672 HAMP domain LQ331_RS08890 PF02895 Signal transducing histidine kinase, homodimeric domain LQ331_RS08890 PF09078 CheY binding LQ331_RS08890 PF01627 Hpt domain LQ331_RS08890 PF01584 CheW-like domain LQ331_RS08890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS08895 PF00072 Response regulator receiver domain LQ331_RS08905 PF01584 CheW-like domain LQ331_RS08910 PF13614 AAA domain LQ331_RS08915 PF00691 OmpA family LQ331_RS08915 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQ331_RS08920 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS08925 PF00072 Response regulator receiver domain LQ331_RS08925 PF01627 Hpt domain LQ331_RS08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS08925 PF02895 Signal transducing histidine kinase, homodimeric domain LQ331_RS08925 PF01584 CheW-like domain LQ331_RS08930 PF04344 Chemotaxis phosphatase, CheZ LQ331_RS08935 PF00072 Response regulator receiver domain LQ331_RS08940 PF04545 Sigma-70, region 4 LQ331_RS08940 PF04542 Sigma-70 region 2 LQ331_RS08940 PF04539 Sigma-70 region 3 LQ331_RS08945 PF10609 NUBPL iron-transfer P-loop NTPase LQ331_RS08950 PF00448 SRP54-type protein, GTPase domain LQ331_RS08955 PF00771 FHIPEP family LQ331_RS08960 PF01312 FlhB HrpN YscU SpaS Family LQ331_RS08970 PF00563 EAL domain LQ331_RS08970 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS08970 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS08975 PF01311 Bacterial export proteins, family 1 LQ331_RS08980 PF01313 Bacterial export proteins, family 3 LQ331_RS08985 PF00813 FliP family LQ331_RS08990 PF04347 Flagellar biosynthesis protein, FliO LQ331_RS08995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQ331_RS09000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQ331_RS09000 PF02154 Flagellar motor switch protein FliM LQ331_RS09020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ331_RS09020 PF18269 T3SS EscN ATPase C-terminal domain LQ331_RS09030 PF14842 FliG N-terminal domain LQ331_RS09030 PF01706 FliG C-terminal domain LQ331_RS09030 PF14841 FliG middle domain LQ331_RS09035 PF01514 Secretory protein of YscJ/FliF family LQ331_RS09035 PF08345 Flagellar M-ring protein C-terminal LQ331_RS09040 PF02049 Flagellar hook-basal body complex protein FliE LQ331_RS09055 PF06490 Flagellar regulatory protein FleQ LQ331_RS09055 PF02954 Bacterial regulatory protein, Fis family LQ331_RS09055 PF00158 Sigma-54 interaction domain LQ331_RS09060 PF00072 Response regulator receiver domain LQ331_RS09060 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS09065 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQ331_RS09065 PF04552 Sigma-54, DNA binding domain LQ331_RS09065 PF04963 Sigma-54 factor, core binding domain LQ331_RS09070 PF00072 Response regulator receiver domain LQ331_RS09070 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS09085 PF02561 Flagellar protein FliS LQ331_RS09090 PF02465 Flagellar hook-associated protein 2 N-terminus LQ331_RS09090 PF07195 Flagellar hook-associated protein 2 C-terminus LQ331_RS09095 PF00700 Bacterial flagellin C-terminal helical region LQ331_RS09095 PF00669 Bacterial flagellin N-terminal helical region LQ331_RS09100 PF00700 Bacterial flagellin C-terminal helical region LQ331_RS09100 PF00669 Bacterial flagellin N-terminal helical region LQ331_RS09105 PF00700 Bacterial flagellin C-terminal helical region LQ331_RS09105 PF00669 Bacterial flagellin N-terminal helical region LQ331_RS09115 PF00460 Flagella basal body rod protein LQ331_RS09115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ331_RS09120 PF10135 Rod binding protein LQ331_RS09120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LQ331_RS09125 PF02119 Flagellar P-ring protein LQ331_RS09130 PF02107 Flagellar L-ring protein LQ331_RS09135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ331_RS09135 PF00460 Flagella basal body rod protein LQ331_RS09140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ331_RS09140 PF00460 Flagella basal body rod protein LQ331_RS09145 PF00460 Flagella basal body rod protein LQ331_RS09145 PF07559 Flagellar basal body protein FlaE LQ331_RS09145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ331_RS09155 PF00460 Flagella basal body rod protein LQ331_RS09155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQ331_RS09160 PF00460 Flagella basal body rod protein LQ331_RS09165 PF01584 CheW-like domain LQ331_RS09165 PF00072 Response regulator receiver domain LQ331_RS09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS09185 PF13188 PAS domain LQ331_RS09185 PF13426 PAS domain LQ331_RS09185 PF00989 PAS fold LQ331_RS09185 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS09190 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS09190 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS09190 PF00563 EAL domain LQ331_RS09195 PF07730 Histidine kinase LQ331_RS09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS09200 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS09200 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS09200 PF00563 EAL domain LQ331_RS09215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS09215 PF00672 HAMP domain LQ331_RS09215 PF12729 Four helix bundle sensory module for signal transduction LQ331_RS09220 PF04356 Protein of unknown function (DUF489) LQ331_RS09230 PF00293 NUDIX domain LQ331_RS09240 PF02617 ATP-dependent Clp protease adaptor protein ClpS LQ331_RS09245 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LQ331_RS09250 PF17871 AAA lid domain LQ331_RS09250 PF07724 AAA domain (Cdc48 subfamily) LQ331_RS09250 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS09250 PF10431 C-terminal, D2-small domain, of ClpB protein LQ331_RS09250 PF02861 Clp amino terminal domain, pathogenicity island component LQ331_RS09260 PF01176 Translation initiation factor 1A / IF-1 LQ331_RS09265 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LQ331_RS09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS09285 PF17854 FtsK alpha domain LQ331_RS09285 PF09397 Ftsk gamma domain LQ331_RS09285 PF01580 FtsK/SpoIIIE family LQ331_RS09285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LQ331_RS09295 PF03548 Outer membrane lipoprotein carrier protein LolA LQ331_RS09305 PF12002 MgsA AAA+ ATPase C terminal LQ331_RS09305 PF16193 AAA C-terminal domain LQ331_RS09305 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS09320 PF00756 Putative esterase LQ331_RS09330 PF01497 Periplasmic binding protein LQ331_RS09335 PF01032 FecCD transport family LQ331_RS09340 PF00005 ABC transporter LQ331_RS09350 PF03144 Elongation factor Tu domain 2 LQ331_RS09350 PF00679 Elongation factor G C-terminus LQ331_RS09350 PF14492 Elongation Factor G, domain II LQ331_RS09350 PF03764 Elongation factor G, domain IV LQ331_RS09350 PF00009 Elongation factor Tu GTP binding domain LQ331_RS09365 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS09365 PF00072 Response regulator receiver domain LQ331_RS09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS09365 PF09308 LuxQ, periplasmic LQ331_RS09405 PF01593 Flavin containing amine oxidoreductase LQ331_RS09420 PF08281 Sigma-70, region 4 LQ331_RS09420 PF04542 Sigma-70 region 2 LQ331_RS09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS09435 PF13188 PAS domain LQ331_RS09435 PF00072 Response regulator receiver domain LQ331_RS09435 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS09435 PF08448 PAS fold LQ331_RS09440 PF00072 Response regulator receiver domain LQ331_RS09445 PF00360 Phytochrome region LQ331_RS09445 PF01590 GAF domain LQ331_RS09445 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS09445 PF08446 PAS fold LQ331_RS09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS09455 PF03073 TspO/MBR family LQ331_RS09465 PF00293 NUDIX domain LQ331_RS09520 PF12804 MobA-like NTP transferase domain LQ331_RS09525 PF02625 XdhC and CoxI family LQ331_RS09525 PF13478 XdhC Rossmann domain LQ331_RS09530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQ331_RS09530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LQ331_RS09535 PF00941 FAD binding domain in molybdopterin dehydrogenase LQ331_RS09535 PF03450 CO dehydrogenase flavoprotein C-terminal domain LQ331_RS09540 PF10518 TAT (twin-arginine translocation) pathway signal sequence LQ331_RS09540 PF01799 [2Fe-2S] binding domain LQ331_RS09540 PF00111 2Fe-2S iron-sulfur cluster binding domain LQ331_RS09550 PF02566 OsmC-like protein LQ331_RS09560 PF03466 LysR substrate binding domain LQ331_RS09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS09580 PF08281 Sigma-70, region 4 LQ331_RS09580 PF04542 Sigma-70 region 2 LQ331_RS09580 PF12680 SnoaL-like domain LQ331_RS09585 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQ331_RS09585 PF00753 Metallo-beta-lactamase superfamily LQ331_RS09590 PF00561 alpha/beta hydrolase fold LQ331_RS09620 PF17755 UvrA DNA-binding domain LQ331_RS09640 PF00355 Rieske [2Fe-2S] domain LQ331_RS09655 PF05974 Domain of unknown function (DUF892) LQ331_RS09660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQ331_RS09660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQ331_RS09680 PF05067 Manganese containing catalase LQ331_RS09685 PF05974 Domain of unknown function (DUF892) LQ331_RS09710 PF00398 Ribosomal RNA adenine dimethylase LQ331_RS09730 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS09730 PF13823 Alcohol dehydrogenase GroES-associated LQ331_RS09730 PF00107 Zinc-binding dehydrogenase LQ331_RS09760 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS09765 PF05524 PEP-utilising enzyme, N-terminal LQ331_RS09765 PF00391 PEP-utilising enzyme, mobile domain LQ331_RS09765 PF02896 PEP-utilising enzyme, TIM barrel domain LQ331_RS09765 PF00381 PTS HPr component phosphorylation site LQ331_RS09765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQ331_RS09770 PF00294 pfkB family carbohydrate kinase LQ331_RS09775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQ331_RS09790 PF01638 HxlR-like helix-turn-helix LQ331_RS09795 PF02469 Fasciclin domain LQ331_RS09800 PF00144 Beta-lactamase LQ331_RS09810 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS09810 PF00593 TonB dependent receptor LQ331_RS09815 PF07690 Major Facilitator Superfamily LQ331_RS09820 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS09825 PF14310 Fibronectin type III-like domain LQ331_RS09825 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ331_RS09825 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ331_RS09830 PF03600 Citrate transporter LQ331_RS09840 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS09845 PF00005 ABC transporter LQ331_RS09855 PF04303 PrpF protein LQ331_RS09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS09860 PF03466 LysR substrate binding domain LQ331_RS09865 PF17755 UvrA DNA-binding domain LQ331_RS09885 PF02219 Methylenetetrahydrofolate reductase LQ331_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS09890 PF03466 LysR substrate binding domain LQ331_RS09895 PF03358 NADPH-dependent FMN reductase LQ331_RS09905 PF08267 Cobalamin-independent synthase, N-terminal domain LQ331_RS09905 PF01717 Cobalamin-independent synthase, Catalytic domain LQ331_RS09920 PF00144 Beta-lactamase LQ331_RS09925 PF10503 Esterase PHB depolymerase LQ331_RS09930 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS09930 PF00593 TonB dependent receptor LQ331_RS09935 PF00561 alpha/beta hydrolase fold LQ331_RS09940 PF01575 MaoC like domain LQ331_RS09945 PF00672 HAMP domain LQ331_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS09945 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS09950 PF00072 Response regulator receiver domain LQ331_RS09950 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS09955 PF00501 AMP-binding enzyme LQ331_RS09955 PF13193 AMP-binding enzyme C-terminal domain LQ331_RS09960 PF03358 NADPH-dependent FMN reductase LQ331_RS09970 PF07729 FCD domain LQ331_RS09970 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS09980 PF14592 Chondroitinase B LQ331_RS09985 PF05426 Alginate lyase LQ331_RS09985 PF07940 Heparinase II/III-like protein LQ331_RS09990 PF07690 Major Facilitator Superfamily LQ331_RS10005 PF00294 pfkB family carbohydrate kinase LQ331_RS10030 PF13419 Haloacid dehalogenase-like hydrolase LQ331_RS10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS10050 PF03466 LysR substrate binding domain LQ331_RS10075 PF00072 Response regulator receiver domain LQ331_RS10075 PF00158 Sigma-54 interaction domain LQ331_RS10075 PF02954 Bacterial regulatory protein, Fis family LQ331_RS10140 PF02245 Methylpurine-DNA glycosylase (MPG) LQ331_RS10150 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS10150 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS10150 PF00563 EAL domain LQ331_RS10155 PF00069 Protein kinase domain LQ331_RS10160 PF03372 Endonuclease/Exonuclease/phosphatase family LQ331_RS10165 PF00128 Alpha amylase, catalytic domain LQ331_RS10165 PF16657 Maltogenic Amylase, C-terminal domain LQ331_RS10170 PF00296 Luciferase-like monooxygenase LQ331_RS10190 PF00005 ABC transporter LQ331_RS10190 PF12704 MacB-like periplasmic core domain LQ331_RS10190 PF02687 FtsX-like permease family LQ331_RS10195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS10205 PF00072 Response regulator receiver domain LQ331_RS10205 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS10210 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS10210 PF00672 HAMP domain LQ331_RS10220 PF06224 Winged helix DNA-binding domain LQ331_RS10230 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS10230 PF00593 TonB dependent receptor LQ331_RS10240 PF00561 alpha/beta hydrolase fold LQ331_RS10250 PF00690 Cation transporter/ATPase, N-terminus LQ331_RS10250 PF00689 Cation transporting ATPase, C-terminus LQ331_RS10255 PF02308 MgtC family LQ331_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS10260 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS10260 PF00989 PAS fold LQ331_RS10260 PF08447 PAS fold LQ331_RS10260 PF13426 PAS domain LQ331_RS10260 PF13493 Domain of unknown function (DUF4118) LQ331_RS10265 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS10265 PF00072 Response regulator receiver domain LQ331_RS10275 PF06772 Bacterial low temperature requirement A protein (LtrA) LQ331_RS10300 PF00753 Metallo-beta-lactamase superfamily LQ331_RS10320 PF00384 Molybdopterin oxidoreductase LQ331_RS10325 PF02634 FdhD/NarQ family LQ331_RS10345 PF07690 Major Facilitator Superfamily LQ331_RS10370 PF00005 ABC transporter LQ331_RS10385 PF03466 LysR substrate binding domain LQ331_RS10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS10390 PF00248 Aldo/keto reductase family LQ331_RS10410 PF04234 CopC domain LQ331_RS10415 PF05425 Copper resistance protein D LQ331_RS10420 PF00072 Response regulator receiver domain LQ331_RS10420 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS10425 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS10425 PF00672 HAMP domain LQ331_RS10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS10430 PF03466 LysR substrate binding domain LQ331_RS10440 PF00873 AcrB/AcrD/AcrF family LQ331_RS10445 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS10445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS10455 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS10455 PF00072 Response regulator receiver domain LQ331_RS10460 PF08521 Two-component sensor kinase N-terminal LQ331_RS10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS10460 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS10465 PF07971 Glycosyl hydrolase family 92 LQ331_RS10465 PF17678 Glycosyl hydrolase family 92 N-terminal domain LQ331_RS10480 PF08946 Osmosensory transporter coiled coil LQ331_RS10480 PF00083 Sugar (and other) transporter LQ331_RS10500 PF08447 PAS fold LQ331_RS10500 PF07536 HWE histidine kinase LQ331_RS10500 PF13426 PAS domain LQ331_RS10520 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS10520 PF00593 TonB dependent receptor LQ331_RS10520 PF07660 Secretin and TonB N terminus short domain LQ331_RS10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS10535 PF03466 LysR substrate binding domain LQ331_RS10540 PF05726 Pirin C-terminal cupin domain LQ331_RS10540 PF02678 Pirin LQ331_RS10545 PF00857 Isochorismatase family LQ331_RS10550 PF00857 Isochorismatase family LQ331_RS10575 PF02472 Biopolymer transport protein ExbD/TolR LQ331_RS10580 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS10600 PF12019 Type II transport protein GspH LQ331_RS10600 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS10605 PF02501 Type II secretion system (T2SS), protein I LQ331_RS10605 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS10610 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS10610 PF11612 Type II secretion system (T2SS), protein J LQ331_RS10620 PF12849 PBP superfamily domain LQ331_RS10625 PF00482 Type II secretion system (T2SS), protein F LQ331_RS10630 PF00437 Type II/IV secretion system protein LQ331_RS10635 PF00263 Bacterial type II and III secretion system protein LQ331_RS10635 PF03958 Bacterial type II/III secretion system short domain LQ331_RS10655 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS10655 PF08334 Type II secretion system (T2SS), protein G LQ331_RS10675 PF04542 Sigma-70 region 2 LQ331_RS10675 PF08281 Sigma-70, region 4 LQ331_RS10685 PF01037 Lrp/AsnC ligand binding domain LQ331_RS10700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQ331_RS10700 PF00128 Alpha amylase, catalytic domain LQ331_RS10710 PF00128 Alpha amylase, catalytic domain LQ331_RS10715 PF02446 4-alpha-glucanotransferase LQ331_RS10720 PF00128 Alpha amylase, catalytic domain LQ331_RS10720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQ331_RS10720 PF11941 Domain of unknown function (DUF3459) LQ331_RS10725 PF00128 Alpha amylase, catalytic domain LQ331_RS10725 PF02806 Alpha amylase, C-terminal all-beta domain LQ331_RS10725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQ331_RS10730 PF08323 Starch synthase catalytic domain LQ331_RS10730 PF00534 Glycosyl transferases group 1 LQ331_RS10735 PF08447 PAS fold LQ331_RS10735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS10740 PF00667 FAD binding domain LQ331_RS10740 PF00175 Oxidoreductase NAD-binding domain LQ331_RS10740 PF00258 Flavodoxin LQ331_RS10745 PF00005 ABC transporter LQ331_RS10745 PF08402 TOBE domain LQ331_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS10760 PF13545 Crp-like helix-turn-helix domain LQ331_RS10760 PF00027 Cyclic nucleotide-binding domain LQ331_RS10765 PF06969 HemN C-terminal domain LQ331_RS10765 PF04055 Radical SAM superfamily LQ331_RS10770 PF07690 Major Facilitator Superfamily LQ331_RS10775 PF00639 PPIC-type PPIASE domain LQ331_RS10775 PF09312 SurA N-terminal domain LQ331_RS10780 PF02665 Nitrate reductase gamma subunit LQ331_RS10785 PF02613 Nitrate reductase delta subunit LQ331_RS10790 PF14711 Respiratory nitrate reductase beta C-terminal LQ331_RS10790 PF13247 4Fe-4S dicluster domain LQ331_RS10795 PF00384 Molybdopterin oxidoreductase LQ331_RS10795 PF01568 Molydopterin dinucleotide binding domain LQ331_RS10795 PF14710 Respiratory nitrate reductase alpha N-terminal LQ331_RS10800 PF07690 Major Facilitator Superfamily LQ331_RS10810 PF12804 MobA-like NTP transferase domain LQ331_RS10815 PF02391 MoaE protein LQ331_RS10825 PF00994 Probable molybdopterin binding domain LQ331_RS10825 PF03454 MoeA C-terminal region (domain IV) LQ331_RS10825 PF03453 MoeA N-terminal region (domain I and II) LQ331_RS10830 PF01967 MoaC family LQ331_RS10830 PF00994 Probable molybdopterin binding domain LQ331_RS10835 PF04055 Radical SAM superfamily LQ331_RS10835 PF06463 Molybdenum Cofactor Synthesis C LQ331_RS10865 PF00561 alpha/beta hydrolase fold LQ331_RS10870 PF12833 Helix-turn-helix domain LQ331_RS10870 PF02311 AraC-like ligand binding domain LQ331_RS10885 PF13533 Biotin-lipoyl like LQ331_RS10890 PF02321 Outer membrane efflux protein LQ331_RS10905 PF00072 Response regulator receiver domain LQ331_RS10905 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS10910 PF00672 HAMP domain LQ331_RS10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS10910 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS10915 PF01219 Prokaryotic diacylglycerol kinase LQ331_RS10920 PF00884 Sulfatase LQ331_RS10920 PF08019 Phosphoethanolamine transferase EptA/EptB LQ331_RS10940 PF04972 BON domain LQ331_RS10940 PF00691 OmpA family LQ331_RS10955 PF00106 short chain dehydrogenase LQ331_RS10960 PF00501 AMP-binding enzyme LQ331_RS10960 PF00975 Thioesterase domain LQ331_RS10960 PF00550 Phosphopantetheine attachment site LQ331_RS10960 PF00668 Condensation domain LQ331_RS10970 PF00550 Phosphopantetheine attachment site LQ331_RS10970 PF00857 Isochorismatase family LQ331_RS10975 PF00501 AMP-binding enzyme LQ331_RS10975 PF13193 AMP-binding enzyme C-terminal domain LQ331_RS10980 PF00425 chorismate binding enzyme LQ331_RS10985 PF07690 Major Facilitator Superfamily LQ331_RS10990 PF03176 MMPL family LQ331_RS10990 PF12823 Domain of unknown function (DUF3817) LQ331_RS10995 PF00296 Luciferase-like monooxygenase LQ331_RS11010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQ331_RS11010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQ331_RS11015 PF01613 Flavin reductase like domain LQ331_RS11025 PF00487 Fatty acid desaturase LQ331_RS11030 PF00175 Oxidoreductase NAD-binding domain LQ331_RS11030 PF00970 Oxidoreductase FAD-binding domain LQ331_RS11030 PF00111 2Fe-2S iron-sulfur cluster binding domain LQ331_RS11035 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS11045 PF03797 Autotransporter beta-domain LQ331_RS11050 PF00593 TonB dependent receptor LQ331_RS11050 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS11060 PF02742 Iron dependent repressor, metal binding and dimerisation domain LQ331_RS11060 PF01325 Iron dependent repressor, N-terminal DNA binding domain LQ331_RS11065 PF01566 Natural resistance-associated macrophage protein LQ331_RS11080 PF00268 Ribonucleotide reductase, small chain LQ331_RS11085 PF00317 Ribonucleotide reductase, all-alpha domain LQ331_RS11085 PF03477 ATP cone domain LQ331_RS11085 PF02867 Ribonucleotide reductase, barrel domain LQ331_RS11090 PF00698 Acyl transferase domain LQ331_RS11090 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS11090 PF16197 Ketoacyl-synthetase C-terminal extension LQ331_RS11090 PF00550 Phosphopantetheine attachment site LQ331_RS11090 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ331_RS11090 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ331_RS11090 PF08659 KR domain LQ331_RS11090 PF14765 Polyketide synthase dehydratase LQ331_RS11095 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS11095 PF00593 TonB dependent receptor LQ331_RS11100 PF02028 BCCT, betaine/carnitine/choline family transporter LQ331_RS11125 PF00893 Small Multidrug Resistance protein LQ331_RS11130 PF00893 Small Multidrug Resistance protein LQ331_RS11135 PF03466 LysR substrate binding domain LQ331_RS11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS11145 PF00593 TonB dependent receptor LQ331_RS11145 PF07660 Secretin and TonB N terminus short domain LQ331_RS11145 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS11150 PF00654 Voltage gated chloride channel LQ331_RS11155 PF02308 MgtC family LQ331_RS11165 PF01209 ubiE/COQ5 methyltransferase family LQ331_RS11175 PF00691 OmpA family LQ331_RS11180 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ331_RS11180 PF05658 Head domain of trimeric autotransporter adhesin LQ331_RS11180 PF03895 YadA-like membrane anchor domain LQ331_RS11180 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ331_RS11180 PF05658 Head domain of trimeric autotransporter adhesin LQ331_RS11180 PF03895 YadA-like membrane anchor domain LQ331_RS11180 PF13018 Extended Signal Peptide of Type V secretion system LQ331_RS11180 PF13018 Extended Signal Peptide of Type V secretion system LQ331_RS11210 PF04972 BON domain LQ331_RS11210 PF13629 Pilus formation protein N terminal region LQ331_RS11210 PF00263 Bacterial type II and III secretion system protein LQ331_RS11220 PF00437 Type II/IV secretion system protein LQ331_RS11260 PF00561 alpha/beta hydrolase fold LQ331_RS11265 PF05977 Transmembrane secretion effector LQ331_RS11275 PF01979 Amidohydrolase family LQ331_RS11285 PF00857 Isochorismatase family LQ331_RS11290 PF12833 Helix-turn-helix domain LQ331_RS11290 PF10114 Sensory domain found in PocR LQ331_RS11300 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQ331_RS11300 PF00672 HAMP domain LQ331_RS11300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS11300 PF07730 Histidine kinase LQ331_RS11305 PF00072 Response regulator receiver domain LQ331_RS11305 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS11310 PF07690 Major Facilitator Superfamily LQ331_RS11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS11315 PF03466 LysR substrate binding domain LQ331_RS11320 PF01979 Amidohydrolase family LQ331_RS11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS11330 PF03466 LysR substrate binding domain LQ331_RS11345 PF01979 Amidohydrolase family LQ331_RS11360 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS11360 PF00593 TonB dependent receptor LQ331_RS11370 PF02611 CDP-diacylglycerol pyrophosphatase LQ331_RS11390 PF01565 FAD binding domain LQ331_RS11390 PF09330 D-lactate dehydrogenase, membrane binding LQ331_RS11395 PF01070 FMN-dependent dehydrogenase LQ331_RS11400 PF07729 FCD domain LQ331_RS11400 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS11405 PF02652 L-lactate permease LQ331_RS11410 PF02308 MgtC family LQ331_RS11425 PF12833 Helix-turn-helix domain LQ331_RS11440 PF07690 Major Facilitator Superfamily LQ331_RS11445 PF03466 LysR substrate binding domain LQ331_RS11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS11450 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ331_RS11450 PF14310 Fibronectin type III-like domain LQ331_RS11450 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQ331_RS11450 PF07691 PA14 domain LQ331_RS11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS11470 PF03466 LysR substrate binding domain LQ331_RS11495 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQ331_RS11495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQ331_RS11495 PF14579 Helix-hairpin-helix motif LQ331_RS11495 PF02811 PHP domain LQ331_RS11495 PF01336 OB-fold nucleic acid binding domain LQ331_RS11505 PF00155 Aminotransferase class I and II LQ331_RS11505 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS11510 PF01168 Alanine racemase, N-terminal domain LQ331_RS11515 PF00117 Glutamine amidotransferase class-I LQ331_RS11515 PF00958 GMP synthase C terminal domain LQ331_RS11515 PF02540 NAD synthase LQ331_RS11530 PF04542 Sigma-70 region 2 LQ331_RS11530 PF08281 Sigma-70, region 4 LQ331_RS11540 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS11540 PF00593 TonB dependent receptor LQ331_RS11565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LQ331_RS11565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LQ331_RS11565 PF01276 Orn/Lys/Arg decarboxylase, major domain LQ331_RS11570 PF13520 Amino acid permease LQ331_RS11580 PF13098 Thioredoxin-like domain LQ331_RS11585 PF00578 AhpC/TSA family LQ331_RS11595 PF13411 MerR HTH family regulatory protein LQ331_RS11650 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS11655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS11655 PF08447 PAS fold LQ331_RS11655 PF13426 PAS domain LQ331_RS11680 PF08448 PAS fold LQ331_RS11680 PF13426 PAS domain LQ331_RS11680 PF08447 PAS fold LQ331_RS11680 PF05231 MASE1 LQ331_RS11680 PF00563 EAL domain LQ331_RS11680 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS11685 PF17674 HHH domain LQ331_RS11685 PF00575 S1 RNA binding domain LQ331_RS11685 PF09371 Tex-like protein N-terminal domain LQ331_RS11685 PF16921 Tex protein YqgF-like domain LQ331_RS11700 PF04024 PspC domain LQ331_RS11705 PF17263 Family of unknown function (DUF5329) LQ331_RS11710 PF00561 alpha/beta hydrolase fold LQ331_RS11725 PF12697 Alpha/beta hydrolase family LQ331_RS11725 PF08241 Methyltransferase domain LQ331_RS11730 PF01554 MatE LQ331_RS11750 PF03618 Kinase/pyrophosphorylase LQ331_RS11755 PF00391 PEP-utilising enzyme, mobile domain LQ331_RS11755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LQ331_RS11755 PF02896 PEP-utilising enzyme, TIM barrel domain LQ331_RS11760 PF00924 Mechanosensitive ion channel LQ331_RS11760 PF05552 Conserved TM helix LQ331_RS11765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ331_RS11775 PF00929 Exonuclease LQ331_RS11780 PF14437 MafB19-like deaminase LQ331_RS11785 PF01638 HxlR-like helix-turn-helix LQ331_RS11790 PF02525 Flavodoxin-like fold LQ331_RS11795 PF13673 Acetyltransferase (GNAT) domain LQ331_RS11855 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LQ331_RS11860 PF05101 Type IV secretory pathway, VirB3-like protein LQ331_RS11865 PF04956 TrbC/VIRB2 family LQ331_RS11870 PF01464 Transglycosylase SLT domain LQ331_RS11875 PF00437 Type II/IV secretion system protein LQ331_RS11880 PF03743 Bacterial conjugation TrbI-like protein LQ331_RS11890 PF04335 VirB8 protein LQ331_RS11900 PF02534 Type IV secretory system Conjugative DNA transfer LQ331_RS11915 PF07690 Major Facilitator Superfamily LQ331_RS11920 PF00376 MerR family regulatory protein LQ331_RS11920 PF09278 MerR, DNA binding LQ331_RS11925 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS11925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ331_RS11955 PF00072 Response regulator receiver domain LQ331_RS11955 PF13426 PAS domain LQ331_RS11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS11960 PF01494 FAD binding domain LQ331_RS11965 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS11965 PF17754 MftR C-terminal domain LQ331_RS11970 PF00593 TonB dependent receptor LQ331_RS11970 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS11990 PF01638 HxlR-like helix-turn-helix LQ331_RS11995 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS11995 PF00107 Zinc-binding dehydrogenase LQ331_RS12005 PF00580 UvrD/REP helicase N-terminal domain LQ331_RS12005 PF12462 DNA helicase IV / RNA helicase N terminal LQ331_RS12005 PF13361 UvrD-like helicase C-terminal domain LQ331_RS12015 PF03527 RHS protein LQ331_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS12040 PF03466 LysR substrate binding domain LQ331_RS12045 PF02525 Flavodoxin-like fold LQ331_RS12055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQ331_RS12055 PF02403 Seryl-tRNA synthetase N-terminal domain LQ331_RS12060 PF03544 Gram-negative bacterial TonB protein C-terminal LQ331_RS12070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQ331_RS12075 PF01842 ACT domain LQ331_RS12075 PF01817 Chorismate mutase type II LQ331_RS12075 PF00800 Prephenate dehydratase LQ331_RS12080 PF00266 Aminotransferase class-V LQ331_RS12125 PF07969 Amidohydrolase family LQ331_RS12130 PF00221 Aromatic amino acid lyase LQ331_RS12140 PF01175 Urocanase Rossmann-like domain LQ331_RS12140 PF17391 Urocanase N-terminal domain LQ331_RS12140 PF17392 Urocanase C-terminal domain LQ331_RS12145 PF00144 Beta-lactamase LQ331_RS12150 PF00593 TonB dependent receptor LQ331_RS12150 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS12180 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS12190 PF04371 Porphyromonas-type peptidyl-arginine deiminase LQ331_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS12195 PF03466 LysR substrate binding domain LQ331_RS12245 PF13360 PQQ-like domain LQ331_RS12250 PF03989 DNA gyrase C-terminal domain, beta-propeller LQ331_RS12250 PF00521 DNA gyrase/topoisomerase IV, subunit A LQ331_RS12255 PF01008 Initiation factor 2 subunit family LQ331_RS12265 PF00152 tRNA synthetases class II (D, K and N) LQ331_RS12275 PF01653 NAD-dependent DNA ligase adenylation domain LQ331_RS12275 PF03120 NAD-dependent DNA ligase OB-fold domain LQ331_RS12275 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LQ331_RS12275 PF12826 Helix-hairpin-helix motif LQ331_RS12275 PF00533 BRCA1 C Terminus (BRCT) domain LQ331_RS12280 PF00155 Aminotransferase class I and II LQ331_RS12285 PF04354 ZipA, C-terminal FtsZ-binding domain LQ331_RS12290 PF02463 RecF/RecN/SMC N terminal domain LQ331_RS12295 PF01281 Ribosomal protein L9, N-terminal domain LQ331_RS12295 PF03948 Ribosomal protein L9, C-terminal domain LQ331_RS12300 PF01084 Ribosomal protein S18 LQ331_RS12305 PF01250 Ribosomal protein S6 LQ331_RS12310 PF03691 Uncharacterised protein family (UPF0167) LQ331_RS12315 PF01521 Iron-sulphur cluster biosynthesis LQ331_RS12320 PF01336 OB-fold nucleic acid binding domain LQ331_RS12320 PF00152 tRNA synthetases class II (D, K and N) LQ331_RS12340 PF00484 Carbonic anhydrase LQ331_RS12345 PF06052 3-hydroxyanthranilic acid dioxygenase LQ331_RS12350 PF00266 Aminotransferase class-V LQ331_RS12355 PF01494 FAD binding domain LQ331_RS12360 PF00929 Exonuclease LQ331_RS12360 PF08411 Exonuclease C-terminal LQ331_RS12380 PF01513 ATP-NAD kinase LQ331_RS12385 PF05088 Bacterial NAD-glutamate dehydrogenase LQ331_RS12395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS12395 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS12400 PF00873 AcrB/AcrD/AcrF family LQ331_RS12415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ331_RS12415 PF02770 Acyl-CoA dehydrogenase, middle domain LQ331_RS12415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ331_RS12420 PF01209 ubiE/COQ5 methyltransferase family LQ331_RS12425 PF02574 Homocysteine S-methyltransferase LQ331_RS12425 PF00809 Pterin binding enzyme LQ331_RS12425 PF02607 B12 binding domain LQ331_RS12425 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQ331_RS12425 PF02310 B12 binding domain LQ331_RS12430 PF02310 B12 binding domain LQ331_RS12430 PF02607 B12 binding domain LQ331_RS12430 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQ331_RS12430 PF00809 Pterin binding enzyme LQ331_RS12430 PF02574 Homocysteine S-methyltransferase LQ331_RS12445 PF04102 SlyX LQ331_RS12450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQ331_RS12450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQ331_RS12450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQ331_RS12455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ331_RS12455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQ331_RS12460 PF00255 Glutathione peroxidase LQ331_RS12470 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS12475 PF00005 ABC transporter LQ331_RS12500 PF10415 Fumarase C C-terminus LQ331_RS12500 PF00206 Lyase LQ331_RS12505 PF08328 Adenylosuccinate lyase C-terminal LQ331_RS12505 PF00206 Lyase LQ331_RS12510 PF08007 Cupin superfamily protein LQ331_RS12520 PF02779 Transketolase, pyrimidine binding domain LQ331_RS12520 PF16078 2-oxoglutarate dehydrogenase N-terminus LQ331_RS12520 PF00676 Dehydrogenase E1 component LQ331_RS12520 PF16870 2-oxoglutarate dehydrogenase C-terminal LQ331_RS12525 PF02817 e3 binding domain LQ331_RS12525 PF00364 Biotin-requiring enzyme LQ331_RS12525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQ331_RS12530 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS12530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ331_RS12545 PF16655 PhoD-like phosphatase, N-terminal domain LQ331_RS12545 PF09423 PhoD-like phosphatase LQ331_RS12555 PF00772 DnaB-like helicase N terminal domain LQ331_RS12555 PF03796 DnaB-like helicase C terminal domain LQ331_RS12560 PF03358 NADPH-dependent FMN reductase LQ331_RS12565 PF00733 Asparagine synthase LQ331_RS12565 PF13537 Glutamine amidotransferase domain LQ331_RS12570 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQ331_RS12570 PF02779 Transketolase, pyrimidine binding domain LQ331_RS12570 PF02780 Transketolase, C-terminal domain LQ331_RS12575 PF02798 Glutathione S-transferase, N-terminal domain LQ331_RS12595 PF01026 TatD related DNase LQ331_RS12600 PF00899 ThiF family LQ331_RS12605 PF01322 Cytochrome C' LQ331_RS12615 PF00313 'Cold-shock' DNA-binding domain LQ331_RS12625 PF02253 Phospholipase A1 LQ331_RS12630 PF03960 ArsC family LQ331_RS12635 PF00043 Glutathione S-transferase, C-terminal domain LQ331_RS12635 PF13417 Glutathione S-transferase, N-terminal domain LQ331_RS12645 PF05681 Fumarate hydratase (Fumerase) LQ331_RS12645 PF05683 Fumarase C-terminus LQ331_RS12650 PF08281 Sigma-70, region 4 LQ331_RS12650 PF12680 SnoaL-like domain LQ331_RS12650 PF04542 Sigma-70 region 2 LQ331_RS12660 PF02627 Carboxymuconolactone decarboxylase family LQ331_RS12665 PF00005 ABC transporter LQ331_RS12670 PF00175 Oxidoreductase NAD-binding domain LQ331_RS12670 PF00970 Oxidoreductase FAD-binding domain LQ331_RS12675 PF00255 Glutathione peroxidase LQ331_RS12680 PF01432 Peptidase family M3 LQ331_RS12710 PF01694 Rhomboid family LQ331_RS12715 PF00854 POT family LQ331_RS12725 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQ331_RS12725 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQ331_RS12730 PF00545 ribonuclease LQ331_RS12745 PF01106 NifU-like domain LQ331_RS12750 PF01329 Pterin 4 alpha carbinolamine dehydratase LQ331_RS12760 PF02535 ZIP Zinc transporter LQ331_RS12765 PF01479 S4 domain LQ331_RS12765 PF00849 RNA pseudouridylate synthase LQ331_RS12770 PF10150 Ribonuclease E/G family LQ331_RS12770 PF12111 Polyribonucleotide phosphorylase C terminal LQ331_RS12770 PF00575 S1 RNA binding domain LQ331_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS12790 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS12795 PF01547 Bacterial extracellular solute-binding protein LQ331_RS12810 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS12815 PF01722 BolA-like protein LQ331_RS12820 PF03795 YCII-related domain LQ331_RS12825 PF02616 Segregation and condensation protein ScpA LQ331_RS12830 PF04079 Segregation and condensation complex subunit ScpB LQ331_RS12835 PF00849 RNA pseudouridylate synthase LQ331_RS12835 PF01479 S4 domain LQ331_RS12845 PF07690 Major Facilitator Superfamily LQ331_RS12860 PF00795 Carbon-nitrogen hydrolase LQ331_RS12865 PF00155 Aminotransferase class I and II LQ331_RS12870 PF00005 ABC transporter LQ331_RS12875 PF03379 CcmB protein LQ331_RS12880 PF01578 Cytochrome C assembly protein LQ331_RS12890 PF03100 CcmE LQ331_RS12895 PF01578 Cytochrome C assembly protein LQ331_RS12895 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LQ331_RS12900 PF08534 Redoxin LQ331_RS12905 PF03918 Cytochrome C biogenesis protein LQ331_RS12915 PF00561 alpha/beta hydrolase fold LQ331_RS12925 PF00005 ABC transporter LQ331_RS12925 PF00664 ABC transporter transmembrane region LQ331_RS12930 PF00664 ABC transporter transmembrane region LQ331_RS12930 PF00005 ABC transporter LQ331_RS12935 PF01654 Cytochrome bd terminal oxidase subunit I LQ331_RS12940 PF02322 Cytochrome bd terminal oxidase subunit II LQ331_RS12970 PF14883 Hypothetical glycosyl hydrolase family 13 LQ331_RS12970 PF01522 Polysaccharide deacetylase LQ331_RS12975 PF00535 Glycosyl transferase family 2 LQ331_RS12985 PF00171 Aldehyde dehydrogenase family LQ331_RS12990 PF01472 PUA domain LQ331_RS12990 PF00696 Amino acid kinase family LQ331_RS13000 PF00206 Lyase LQ331_RS13005 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQ331_RS13015 PF00696 Amino acid kinase family LQ331_RS13015 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LQ331_RS13020 PF07687 Peptidase dimerisation domain LQ331_RS13020 PF01546 Peptidase family M20/M25/M40 LQ331_RS13025 PF00764 Arginosuccinate synthase LQ331_RS13030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQ331_RS13030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQ331_RS13040 PF09190 DALR domain LQ331_RS13040 PF01406 tRNA synthetases class I (C) catalytic domain LQ331_RS13045 PF02657 Fe-S metabolism associated domain LQ331_RS13055 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQ331_RS13060 PF01809 Putative membrane protein insertion efficiency factor LQ331_RS13065 PF01979 Amidohydrolase family LQ331_RS13070 PF01551 Peptidase family M23 LQ331_RS13070 PF08460 Bacterial SH3 domain LQ331_RS13080 PF13419 Haloacid dehalogenase-like hydrolase LQ331_RS13090 PF01979 Amidohydrolase family LQ331_RS13095 PF01132 Elongation factor P (EF-P) OB domain LQ331_RS13095 PF08207 Elongation factor P (EF-P) KOW-like domain LQ331_RS13095 PF09285 Elongation factor P, C-terminal LQ331_RS13100 PF04055 Radical SAM superfamily LQ331_RS13105 PF03707 Bacterial signalling protein N terminal repeat LQ331_RS13105 PF13188 PAS domain LQ331_RS13105 PF00563 EAL domain LQ331_RS13105 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS13115 PF00588 SpoU rRNA Methylase family LQ331_RS13120 PF00459 Inositol monophosphatase family LQ331_RS13130 PF01435 Peptidase family M48 LQ331_RS13135 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQ331_RS13140 PF00106 short chain dehydrogenase LQ331_RS13145 PF05233 PHB accumulation regulatory domain LQ331_RS13145 PF07879 PHB/PHA accumulation regulator DNA-binding domain LQ331_RS13160 PF01119 DNA mismatch repair protein, C-terminal domain LQ331_RS13160 PF08676 MutL C terminal dimerisation domain LQ331_RS13165 PF01520 N-acetylmuramoyl-L-alanine amidase LQ331_RS13170 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LQ331_RS13175 PF01256 Carbohydrate kinase LQ331_RS13175 PF03853 YjeF-related protein N-terminus LQ331_RS13180 PF08331 Domain of unknown function (DUF1730) LQ331_RS13185 PF02601 Exonuclease VII, large subunit LQ331_RS13185 PF13742 OB-fold nucleic acid binding domain LQ331_RS13195 PF03781 Sulfatase-modifying factor enzyme 1 LQ331_RS13200 PF01612 3'-5' exonuclease LQ331_RS13200 PF00570 HRDC domain LQ331_RS13215 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS13215 PF00593 TonB dependent receptor LQ331_RS13220 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS13230 PF00561 alpha/beta hydrolase fold LQ331_RS13235 PF07859 alpha/beta hydrolase fold LQ331_RS13260 PF02805 Metal binding domain of Ada LQ331_RS13260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQ331_RS13260 PF12833 Helix-turn-helix domain LQ331_RS13260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQ331_RS13265 PF16884 N-terminal domain of oxidoreductase LQ331_RS13265 PF00107 Zinc-binding dehydrogenase LQ331_RS13290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ331_RS13290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ331_RS13290 PF02770 Acyl-CoA dehydrogenase, middle domain LQ331_RS13290 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQ331_RS13300 PF02779 Transketolase, pyrimidine binding domain LQ331_RS13300 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQ331_RS13300 PF02780 Transketolase, C-terminal domain LQ331_RS13330 PF17932 Tetracyclin repressor-like, C-terminal domain LQ331_RS13330 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS13335 PF00893 Small Multidrug Resistance protein LQ331_RS13340 PF07043 Protein of unknown function (DUF1328) LQ331_RS13345 PF01810 LysE type translocator LQ331_RS13385 PF00216 Bacterial DNA-binding protein LQ331_RS13390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LQ331_RS13390 PF03147 Ferredoxin-fold anticodon binding domain LQ331_RS13390 PF01588 Putative tRNA binding domain LQ331_RS13390 PF03484 tRNA synthetase B5 domain LQ331_RS13390 PF03483 B3/4 domain LQ331_RS13395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LQ331_RS13395 PF01409 tRNA synthetases class II core domain (F) LQ331_RS13400 PF00453 Ribosomal protein L20 LQ331_RS13405 PF01632 Ribosomal protein L35 LQ331_RS13410 PF00707 Translation initiation factor IF-3, C-terminal domain LQ331_RS13410 PF05198 Translation initiation factor IF-3, N-terminal domain LQ331_RS13415 PF03129 Anticodon binding domain LQ331_RS13415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQ331_RS13415 PF02824 TGS domain LQ331_RS13415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQ331_RS13435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ331_RS13440 PF00041 Fibronectin type III domain LQ331_RS13440 PF00704 Glycosyl hydrolases family 18 LQ331_RS13450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LQ331_RS13450 PF03725 3' exoribonuclease family, domain 2 LQ331_RS13450 PF01138 3' exoribonuclease family, domain 1 LQ331_RS13450 PF00013 KH domain LQ331_RS13450 PF00575 S1 RNA binding domain LQ331_RS13455 PF00312 Ribosomal protein S15 LQ331_RS13460 PF09157 Pseudouridine synthase II TruB, C-terminal LQ331_RS13460 PF16198 tRNA pseudouridylate synthase B C-terminal domain LQ331_RS13460 PF01509 TruB family pseudouridylate synthase (N terminal domain) LQ331_RS13465 PF02033 Ribosome-binding factor A LQ331_RS13470 PF00009 Elongation factor Tu GTP binding domain LQ331_RS13470 PF11987 Translation-initiation factor 2 LQ331_RS13470 PF08364 Bacterial translation initiation factor IF-2 associated region LQ331_RS13470 PF04760 Translation initiation factor IF-2, N-terminal region LQ331_RS13475 PF13184 NusA-like KH domain LQ331_RS13475 PF08529 NusA N-terminal domain LQ331_RS13475 PF00575 S1 RNA binding domain LQ331_RS13480 PF17384 RimP C-terminal SH3 domain LQ331_RS13480 PF02576 RimP N-terminal domain LQ331_RS13495 PF00361 Proton-conducting membrane transporter LQ331_RS13500 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LQ331_RS13500 PF00361 Proton-conducting membrane transporter LQ331_RS13505 PF00361 Proton-conducting membrane transporter LQ331_RS13505 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQ331_RS13510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQ331_RS13515 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LQ331_RS13520 PF12838 4Fe-4S dicluster domain LQ331_RS13525 PF00146 NADH dehydrogenase LQ331_RS13530 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LQ331_RS13530 PF00384 Molybdopterin oxidoreductase LQ331_RS13530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LQ331_RS13535 PF10531 SLBB domain LQ331_RS13535 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LQ331_RS13535 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LQ331_RS13545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LQ331_RS13550 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LQ331_RS13555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LQ331_RS13560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LQ331_RS13575 PF00121 Triosephosphate isomerase LQ331_RS13590 PF11893 Domain of unknown function (DUF3413) LQ331_RS13590 PF00884 Sulfatase LQ331_RS13595 PF13439 Glycosyltransferase Family 4 LQ331_RS13595 PF00534 Glycosyl transferases group 1 LQ331_RS13600 PF01522 Polysaccharide deacetylase LQ331_RS13605 PF16363 GDP-mannose 4,6 dehydratase LQ331_RS13610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQ331_RS13610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQ331_RS13610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQ331_RS13610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQ331_RS13615 PF01039 Carboxyl transferase domain LQ331_RS13615 PF17848 Acetyl-coA carboxylase zinc finger domain LQ331_RS13620 PF00290 Tryptophan synthase alpha chain LQ331_RS13630 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS13635 PF03466 LysR substrate binding domain LQ331_RS13650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LQ331_RS13655 PF01416 tRNA pseudouridine synthase LQ331_RS13670 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQ331_RS13670 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQ331_RS13675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQ331_RS13675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQ331_RS13680 PF01264 Chorismate synthase LQ331_RS13685 PF05175 Methyltransferase small domain LQ331_RS13690 PF02630 SCO1/SenC LQ331_RS13695 PF02666 Phosphatidylserine decarboxylase LQ331_RS13710 PF05872 Bacterial protein of unknown function (DUF853) LQ331_RS13715 PF03449 Transcription elongation factor, N-terminal LQ331_RS13715 PF01272 Transcription elongation factor, GreA/GreB, C-term LQ331_RS13725 PF18693 TRAM domain LQ331_RS13725 PF00919 Uncharacterized protein family UPF0004 LQ331_RS13725 PF04055 Radical SAM superfamily LQ331_RS13730 PF01738 Dienelactone hydrolase family LQ331_RS13745 PF00692 dUTPase LQ331_RS13750 PF10609 NUBPL iron-transfer P-loop NTPase LQ331_RS13755 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS13755 PF00593 TonB dependent receptor LQ331_RS13760 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS13760 PF00593 TonB dependent receptor LQ331_RS13765 PF00593 TonB dependent receptor LQ331_RS13770 PF01431 Peptidase family M13 LQ331_RS13770 PF05649 Peptidase family M13 LQ331_RS13805 PF00892 EamA-like transporter family LQ331_RS13810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ331_RS13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS13815 PF01266 FAD dependent oxidoreductase LQ331_RS13820 PF04235 Protein of unknown function (DUF418) LQ331_RS13825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQ331_RS13830 PF00877 NlpC/P60 family LQ331_RS13835 PF00877 NlpC/P60 family LQ331_RS13840 PF00375 Sodium:dicarboxylate symporter family LQ331_RS13855 PF01171 PP-loop family LQ331_RS13855 PF09179 TilS substrate binding domain LQ331_RS13855 PF11734 TilS substrate C-terminal domain LQ331_RS13860 PF02609 Exonuclease VII small subunit LQ331_RS13865 PF00348 Polyprenyl synthetase LQ331_RS13875 PF01523 Putative modulator of DNA gyrase LQ331_RS13880 PF04751 Protein of unknown function (DUF615) LQ331_RS13885 PF01523 Putative modulator of DNA gyrase LQ331_RS13895 PF10150 Ribonuclease E/G family LQ331_RS13895 PF00575 S1 RNA binding domain LQ331_RS13900 PF02545 Maf-like protein LQ331_RS13905 PF04402 Protein of unknown function (DUF541) LQ331_RS13915 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS13915 PF00593 TonB dependent receptor LQ331_RS13920 PF13520 Amino acid permease LQ331_RS13930 PF02590 Predicted SPOUT methyltransferase LQ331_RS13940 PF01467 Cytidylyltransferase-like LQ331_RS13955 PF13603 Leucyl-tRNA synthetase, Domain 2 LQ331_RS13955 PF00133 tRNA synthetases class I (I, L, M and V) LQ331_RS13955 PF08264 Anticodon-binding domain of tRNA LQ331_RS13965 PF00085 Thioredoxin LQ331_RS13975 PF01590 GAF domain LQ331_RS13975 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS13975 PF00360 Phytochrome region LQ331_RS13975 PF00563 EAL domain LQ331_RS13995 PF02592 Putative vitamin uptake transporter LQ331_RS14005 PF00144 Beta-lactamase LQ331_RS14005 PF11954 Domain of unknown function (DUF3471) LQ331_RS14010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ331_RS14020 PF09334 tRNA synthetases class I (M) LQ331_RS14020 PF01588 Putative tRNA binding domain LQ331_RS14030 PF04060 Putative Fe-S cluster LQ331_RS14035 PF01042 Endoribonuclease L-PSP LQ331_RS14040 PF03706 Lysylphosphatidylglycerol synthase TM region LQ331_RS14040 PF09924 Uncharacterised conserved protein (DUF2156) LQ331_RS14070 PF03831 PhnA domain LQ331_RS14070 PF08274 PhnA Zinc-Ribbon LQ331_RS14075 PF00012 Hsp70 protein LQ331_RS14100 PF04542 Sigma-70 region 2 LQ331_RS14100 PF08281 Sigma-70, region 4 LQ331_RS14115 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQ331_RS14120 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LQ331_RS14125 PF01863 Protein of unknown function DUF45 LQ331_RS14135 PF13091 PLD-like domain LQ331_RS14145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LQ331_RS14145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LQ331_RS14150 PF03797 Autotransporter beta-domain LQ331_RS14150 PF00082 Subtilase family LQ331_RS14155 PF02803 Thiolase, C-terminal domain LQ331_RS14155 PF00108 Thiolase, N-terminal domain LQ331_RS14170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ331_RS14170 PF02770 Acyl-CoA dehydrogenase, middle domain LQ331_RS14170 PF18158 Adaptive response protein AidB N-terminal domain LQ331_RS14180 PF01068 ATP dependent DNA ligase domain LQ331_RS14180 PF04675 DNA ligase N terminus LQ331_RS14180 PF04679 ATP dependent DNA ligase C terminal region LQ331_RS14185 PF00271 Helicase conserved C-terminal domain LQ331_RS14185 PF00270 DEAD/DEAH box helicase LQ331_RS14185 PF08494 DEAD/H associated LQ331_RS14200 PF01494 FAD binding domain LQ331_RS14205 PF00313 'Cold-shock' DNA-binding domain LQ331_RS14210 PF01048 Phosphorylase superfamily LQ331_RS14215 PF00156 Phosphoribosyl transferase domain LQ331_RS14220 PF00933 Glycosyl hydrolase family 3 N terminal domain LQ331_RS14225 PF01323 DSBA-like thioredoxin domain LQ331_RS14230 PF01928 CYTH domain LQ331_RS14235 PF05958 tRNA (Uracil-5-)-methyltransferase LQ331_RS14240 PF00072 Response regulator receiver domain LQ331_RS14240 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS14245 PF02565 Recombination protein O C terminal LQ331_RS14245 PF11967 Recombination protein O N terminal LQ331_RS14250 PF07650 KH domain LQ331_RS14250 PF01926 50S ribosome-binding GTPase LQ331_RS14255 PF00035 Double-stranded RNA binding motif LQ331_RS14255 PF14622 Ribonuclease-III-like LQ331_RS14265 PF10502 Signal peptidase, peptidase S26 LQ331_RS14270 PF00009 Elongation factor Tu GTP binding domain LQ331_RS14270 PF06421 GTP-binding protein LepA C-terminus LQ331_RS14270 PF03144 Elongation factor Tu domain 2 LQ331_RS14270 PF00679 Elongation factor G C-terminus LQ331_RS14275 PF13180 PDZ domain LQ331_RS14285 PF08281 Sigma-70, region 4 LQ331_RS14285 PF04542 Sigma-70 region 2 LQ331_RS14290 PF00378 Enoyl-CoA hydratase/isomerase LQ331_RS14290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQ331_RS14290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQ331_RS14295 PF05726 Pirin C-terminal cupin domain LQ331_RS14295 PF02678 Pirin LQ331_RS14300 PF00230 Major intrinsic protein LQ331_RS14310 PF02678 Pirin LQ331_RS14310 PF05726 Pirin C-terminal cupin domain LQ331_RS14315 PF02554 Carbon starvation protein CstA LQ331_RS14315 PF13722 5TM C-terminal transporter carbon starvation CstA LQ331_RS14320 PF04328 Selenoprotein, putative LQ331_RS14335 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS14335 PF00672 HAMP domain LQ331_RS14335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS14340 PF00072 Response regulator receiver domain LQ331_RS14340 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS14355 PF08019 Phosphoethanolamine transferase EptA/EptB LQ331_RS14355 PF00884 Sulfatase LQ331_RS14375 PF07690 Major Facilitator Superfamily LQ331_RS14380 PF02347 Glycine cleavage system P-protein LQ331_RS14390 PF00324 Amino acid permease LQ331_RS14395 PF12833 Helix-turn-helix domain LQ331_RS14395 PF02311 AraC-like ligand binding domain LQ331_RS14400 PF00199 Catalase LQ331_RS14400 PF06628 Catalase-related immune-responsive LQ331_RS14400 PF18011 C-terminal domain found in long catalases LQ331_RS14425 PF02203 Tar ligand binding domain homologue LQ331_RS14425 PF00672 HAMP domain LQ331_RS14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS14430 PF03734 L,D-transpeptidase catalytic domain LQ331_RS14430 PF01476 LysM domain LQ331_RS14435 PF04225 Opacity-associated protein A LysM-like domain LQ331_RS14435 PF01551 Peptidase family M23 LQ331_RS14445 PF00709 Adenylosuccinate synthetase LQ331_RS14455 PF01145 SPFH domain / Band 7 family LQ331_RS14460 PF01145 SPFH domain / Band 7 family LQ331_RS14460 PF12221 Bacterial membrane protein N terminal LQ331_RS14465 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS14465 PF00107 Zinc-binding dehydrogenase LQ331_RS14470 PF00072 Response regulator receiver domain LQ331_RS14475 PF00226 DnaJ domain LQ331_RS14475 PF01556 DnaJ C terminal domain LQ331_RS14480 PF00462 Glutaredoxin LQ331_RS14480 PF08534 Redoxin LQ331_RS14490 PF06832 Penicillin-Binding Protein C-terminus Family LQ331_RS14490 PF00912 Transglycosylase LQ331_RS14490 PF00905 Penicillin binding protein transpeptidase domain LQ331_RS14495 PF00207 Alpha-2-macroglobulin family LQ331_RS14495 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LQ331_RS14495 PF01835 MG2 domain LQ331_RS14495 PF17962 Bacterial macroglobulin domain 6 LQ331_RS14495 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LQ331_RS14495 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LQ331_RS14495 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LQ331_RS14495 PF07703 Alpha-2-macroglobulin bait region domain LQ331_RS14500 PF03972 MmgE/PrpD family LQ331_RS14505 PF04303 PrpF protein LQ331_RS14515 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LQ331_RS14520 PF00330 Aconitase family (aconitate hydratase) LQ331_RS14520 PF00694 Aconitase C-terminal domain LQ331_RS14525 PF00285 Citrate synthase, C-terminal domain LQ331_RS14535 PF02954 Bacterial regulatory protein, Fis family LQ331_RS14535 PF06506 Propionate catabolism activator LQ331_RS14535 PF00158 Sigma-54 interaction domain LQ331_RS14550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LQ331_RS14550 PF01243 Pyridoxamine 5'-phosphate oxidase LQ331_RS14565 PF01202 Shikimate kinase LQ331_RS14570 PF01761 3-dehydroquinate synthase LQ331_RS14580 PF01208 Uroporphyrinogen decarboxylase (URO-D) LQ331_RS14585 PF07690 Major Facilitator Superfamily LQ331_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS14590 PF01627 Hpt domain LQ331_RS14590 PF00672 HAMP domain LQ331_RS14590 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS14590 PF17149 Periplasmic sensor domain found in signal transduction proteins LQ331_RS14590 PF00072 Response regulator receiver domain LQ331_RS14595 PF17149 Periplasmic sensor domain found in signal transduction proteins LQ331_RS14595 PF00672 HAMP domain LQ331_RS14595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS14595 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS14595 PF01627 Hpt domain LQ331_RS14595 PF00072 Response regulator receiver domain LQ331_RS14605 PF01292 Prokaryotic cytochrome b561 LQ331_RS14620 PF03313 Serine dehydratase alpha chain LQ331_RS14620 PF03315 Serine dehydratase beta chain LQ331_RS14625 PF00561 alpha/beta hydrolase fold LQ331_RS14630 PF00696 Amino acid kinase family LQ331_RS14630 PF03447 Homoserine dehydrogenase, NAD binding domain LQ331_RS14630 PF00742 Homoserine dehydrogenase LQ331_RS14635 PF01053 Cys/Met metabolism PLP-dependent enzyme LQ331_RS14640 PF00561 alpha/beta hydrolase fold LQ331_RS14645 PF01551 Peptidase family M23 LQ331_RS14645 PF08525 Opacity-associated protein A N-terminal motif LQ331_RS14645 PF01476 LysM domain LQ331_RS14650 PF00009 Elongation factor Tu GTP binding domain LQ331_RS14650 PF16658 Class II release factor RF3, C-terminal domain LQ331_RS14655 PF03006 Haemolysin-III related LQ331_RS14670 PF00535 Glycosyl transferase family 2 LQ331_RS14675 PF00912 Transglycosylase LQ331_RS14680 PF01430 Hsp33 protein LQ331_RS14690 PF00593 TonB dependent receptor LQ331_RS14690 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS14695 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS14705 PF09317 Domain of unknown function (DUF1974) LQ331_RS14705 PF02770 Acyl-CoA dehydrogenase, middle domain LQ331_RS14705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ331_RS14705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ331_RS14735 PF03466 LysR substrate binding domain LQ331_RS14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS14745 PF01597 Glycine cleavage H-protein LQ331_RS14750 PF01571 Aminomethyltransferase folate-binding domain LQ331_RS14750 PF08669 Glycine cleavage T-protein C-terminal barrel domain LQ331_RS14760 PF01145 SPFH domain / Band 7 family LQ331_RS14760 PF16200 C-terminal region of band_7 LQ331_RS14770 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LQ331_RS14775 PF03819 MazG nucleotide pyrophosphohydrolase domain LQ331_RS14780 PF00459 Inositol monophosphatase family LQ331_RS14785 PF00293 NUDIX domain LQ331_RS14790 PF00202 Aminotransferase class-III LQ331_RS14795 PF04452 RNA methyltransferase LQ331_RS14810 PF01584 CheW-like domain LQ331_RS14810 PF00072 Response regulator receiver domain LQ331_RS14810 PF02895 Signal transducing histidine kinase, homodimeric domain LQ331_RS14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS14810 PF01627 Hpt domain LQ331_RS14815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS14815 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQ331_RS14820 PF01584 CheW-like domain LQ331_RS14825 PF00072 Response regulator receiver domain LQ331_RS14830 PF00072 Response regulator receiver domain LQ331_RS14835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LQ331_RS14835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LQ331_RS14845 PF00814 Glycoprotease family LQ331_RS14850 PF04851 Type III restriction enzyme, res subunit LQ331_RS14850 PF13307 Helicase C-terminal domain LQ331_RS14865 PF00912 Transglycosylase LQ331_RS14865 PF14814 Bifunctional transglycosylase second domain LQ331_RS14865 PF00905 Penicillin binding protein transpeptidase domain LQ331_RS14870 PF00535 Glycosyl transferase family 2 LQ331_RS14885 PF13291 ACT domain LQ331_RS14885 PF04607 Region found in RelA / SpoT proteins LQ331_RS14885 PF02824 TGS domain LQ331_RS14895 PF00270 DEAD/DEAH box helicase LQ331_RS14895 PF11898 Domain of unknown function (DUF3418) LQ331_RS14895 PF04408 Helicase associated domain (HA2) LQ331_RS14895 PF00271 Helicase conserved C-terminal domain LQ331_RS14895 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LQ331_RS14900 PF00210 Ferritin-like domain LQ331_RS14905 PF09382 RQC domain LQ331_RS14905 PF16124 RecQ zinc-binding LQ331_RS14905 PF00570 HRDC domain LQ331_RS14905 PF00271 Helicase conserved C-terminal domain LQ331_RS14905 PF00270 DEAD/DEAH box helicase LQ331_RS14915 PF00394 Multicopper oxidase LQ331_RS14915 PF07731 Multicopper oxidase LQ331_RS14915 PF07732 Multicopper oxidase LQ331_RS14920 PF05275 Copper resistance protein B precursor (CopB) LQ331_RS14970 PF06508 Queuosine biosynthesis protein QueC LQ331_RS14975 PF04055 Radical SAM superfamily LQ331_RS14985 PF00691 OmpA family LQ331_RS14990 PF07676 WD40-like Beta Propeller Repeat LQ331_RS14990 PF04052 TolB amino-terminal domain LQ331_RS15000 PF02472 Biopolymer transport protein ExbD/TolR LQ331_RS15005 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS15010 PF03061 Thioesterase superfamily LQ331_RS15015 PF17864 RuvB AAA lid domain LQ331_RS15015 PF05491 RuvB C-terminal winged helix domain LQ331_RS15015 PF05496 Holliday junction DNA helicase RuvB P-loop domain LQ331_RS15025 PF07499 RuvA, C-terminal domain LQ331_RS15025 PF01330 RuvA N terminal domain LQ331_RS15030 PF02075 Crossover junction endodeoxyribonuclease RuvC LQ331_RS15035 PF01709 Transcriptional regulator LQ331_RS15055 PF02938 GAD domain LQ331_RS15055 PF00152 tRNA synthetases class II (D, K and N) LQ331_RS15055 PF01336 OB-fold nucleic acid binding domain LQ331_RS15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS15080 PF03466 LysR substrate binding domain LQ331_RS15085 PF00005 ABC transporter LQ331_RS15085 PF12848 ABC transporter LQ331_RS15095 PF00999 Sodium/hydrogen exchanger family LQ331_RS15095 PF02254 TrkA-N domain LQ331_RS15100 PF01053 Cys/Met metabolism PLP-dependent enzyme LQ331_RS15105 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS15105 PF00072 Response regulator receiver domain LQ331_RS15110 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS15110 PF00672 HAMP domain LQ331_RS15110 PF16527 Two-component sensor protein CpxA, periplasmic domain LQ331_RS15120 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS15120 PF07724 AAA domain (Cdc48 subfamily) LQ331_RS15120 PF17871 AAA lid domain LQ331_RS15120 PF02861 Clp amino terminal domain, pathogenicity island component LQ331_RS15120 PF10431 C-terminal, D2-small domain, of ClpB protein LQ331_RS15140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQ331_RS15140 PF00205 Thiamine pyrophosphate enzyme, central domain LQ331_RS15140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQ331_RS15155 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS15155 PF00593 TonB dependent receptor LQ331_RS15160 PF02358 Trehalose-phosphatase LQ331_RS15165 PF00723 Glycosyl hydrolases family 15 LQ331_RS15170 PF00982 Glycosyltransferase family 20 LQ331_RS15175 PF04134 Protein of unknown function, DUF393 LQ331_RS15185 PF02578 Multi-copper polyphenol oxidoreductase laccase LQ331_RS15190 PF00849 RNA pseudouridylate synthase LQ331_RS15195 PF13525 Outer membrane lipoprotein LQ331_RS15205 PF02540 NAD synthase LQ331_RS15205 PF00795 Carbon-nitrogen hydrolase LQ331_RS15210 PF02629 CoA binding domain LQ331_RS15210 PF00549 CoA-ligase LQ331_RS15215 PF08442 ATP-grasp domain LQ331_RS15215 PF00549 CoA-ligase LQ331_RS15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS15220 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS15225 PF00158 Sigma-54 interaction domain LQ331_RS15225 PF02954 Bacterial regulatory protein, Fis family LQ331_RS15225 PF00072 Response regulator receiver domain LQ331_RS15230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ331_RS15230 PF00437 Type II/IV secretion system protein LQ331_RS15235 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS15235 PF00114 Pilin (bacterial filament) LQ331_RS15245 PF00482 Type II secretion system (T2SS), protein F LQ331_RS15250 PF06750 Bacterial Peptidase A24 N-terminal domain LQ331_RS15250 PF01478 Type IV leader peptidase family LQ331_RS15255 PF01121 Dephospho-CoA kinase LQ331_RS15265 PF00989 PAS fold LQ331_RS15265 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS15265 PF11808 Phosphate regulon sensor protein PhoR LQ331_RS15270 PF00072 Response regulator receiver domain LQ331_RS15270 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS15285 PF08443 RimK-like ATP-grasp domain LQ331_RS15285 PF18030 RimK PreATP-grasp domain LQ331_RS15310 PF03797 Autotransporter beta-domain LQ331_RS15310 PF00657 GDSL-like Lipase/Acylhydrolase LQ331_RS15320 PF05690 Thiazole biosynthesis protein ThiG LQ331_RS15325 PF02390 Putative methyltransferase LQ331_RS15330 PF03600 Citrate transporter LQ331_RS15330 PF02080 TrkA-C domain LQ331_RS15345 PF01557 Fumarylacetoacetate (FAA) hydrolase family LQ331_RS15350 PF01741 Large-conductance mechanosensitive channel, MscL LQ331_RS15360 PF00588 SpoU rRNA Methylase family LQ331_RS15360 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQ331_RS15365 PF01235 Sodium:alanine symporter family LQ331_RS15375 PF00873 AcrB/AcrD/AcrF family LQ331_RS15380 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS15380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS15395 PF03466 LysR substrate binding domain LQ331_RS15400 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS15405 PF01661 Macro domain LQ331_RS15415 PF00274 Fructose-bisphosphate aldolase class-I LQ331_RS15420 PF02887 Pyruvate kinase, alpha/beta domain LQ331_RS15420 PF00224 Pyruvate kinase, barrel domain LQ331_RS15425 PF13419 Haloacid dehalogenase-like hydrolase LQ331_RS15430 PF00162 Phosphoglycerate kinase LQ331_RS15445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQ331_RS15445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQ331_RS15450 PF03922 OmpW family LQ331_RS15460 PF00753 Metallo-beta-lactamase superfamily LQ331_RS15475 PF03965 Penicillinase repressor LQ331_RS15490 PF02779 Transketolase, pyrimidine binding domain LQ331_RS15490 PF02780 Transketolase, C-terminal domain LQ331_RS15490 PF00456 Transketolase, thiamine diphosphate binding domain LQ331_RS15495 PF00375 Sodium:dicarboxylate symporter family LQ331_RS15505 PF07584 Aerotolerance regulator N-terminal LQ331_RS15505 PF13519 von Willebrand factor type A domain LQ331_RS15525 PF17863 AAA lid domain LQ331_RS15525 PF07726 ATPase family associated with various cellular activities (AAA) LQ331_RS15530 PF03958 Bacterial type II/III secretion system short domain LQ331_RS15530 PF07660 Secretin and TonB N terminus short domain LQ331_RS15530 PF11741 AMIN domain LQ331_RS15530 PF00263 Bacterial type II and III secretion system protein LQ331_RS15535 PF04351 Pilus assembly protein, PilP LQ331_RS15540 PF04350 Pilus assembly protein, PilO LQ331_RS15550 PF11104 Type IV pilus assembly protein PilM; LQ331_RS15555 PF17092 Penicillin-binding protein OB-like domain LQ331_RS15555 PF00912 Transglycosylase LQ331_RS15555 PF00905 Penicillin binding protein transpeptidase domain LQ331_RS15570 PF05658 Head domain of trimeric autotransporter adhesin LQ331_RS15570 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ331_RS15570 PF03895 YadA-like membrane anchor domain LQ331_RS15570 PF05658 Head domain of trimeric autotransporter adhesin LQ331_RS15570 PF03895 YadA-like membrane anchor domain LQ331_RS15570 PF05662 Coiled stalk of trimeric autotransporter adhesin LQ331_RS15585 PF15976 CS1-pili formation C-terminal LQ331_RS15585 PF16967 E-set like domain LQ331_RS15585 PF17271 TcfC Usher-like barrel domain LQ331_RS15600 PF00285 Citrate synthase, C-terminal domain LQ331_RS15605 PF01197 Ribosomal protein L31 LQ331_RS15610 PF01156 Inosine-uridine preferring nucleoside hydrolase LQ331_RS15615 PF17191 RecG wedge domain LQ331_RS15615 PF00270 DEAD/DEAH box helicase LQ331_RS15615 PF00271 Helicase conserved C-terminal domain LQ331_RS15620 PF01042 Endoribonuclease L-PSP LQ331_RS15625 PF13291 ACT domain LQ331_RS15625 PF04607 Region found in RelA / SpoT proteins LQ331_RS15625 PF02824 TGS domain LQ331_RS15630 PF01192 RNA polymerase Rpb6 LQ331_RS15635 PF00625 Guanylate kinase LQ331_RS15645 PF13247 4Fe-4S dicluster domain LQ331_RS15645 PF12800 4Fe-4S binding domain LQ331_RS15645 PF09163 Formate dehydrogenase N, transmembrane LQ331_RS15650 PF01292 Prokaryotic cytochrome b561 LQ331_RS15655 PF04216 Protein involved in formate dehydrogenase formation LQ331_RS15660 PF03841 L-seryl-tRNA selenium transferase LQ331_RS15660 PF12390 Selenocysteine synthase N terminal LQ331_RS15665 PF09107 Elongation factor SelB, winged helix LQ331_RS15665 PF09106 Elongation factor SelB, winged helix LQ331_RS15665 PF03144 Elongation factor Tu domain 2 LQ331_RS15665 PF00009 Elongation factor Tu GTP binding domain LQ331_RS15675 PF02769 AIR synthase related protein, C-terminal domain LQ331_RS15675 PF00586 AIR synthase related protein, N-terminal domain LQ331_RS15680 PF03755 YicC-like family, N-terminal region LQ331_RS15680 PF08340 Domain of unknown function (DUF1732) LQ331_RS15685 PF01138 3' exoribonuclease family, domain 1 LQ331_RS15685 PF03725 3' exoribonuclease family, domain 2 LQ331_RS15690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ331_RS15695 PF01725 Ham1 family LQ331_RS15700 PF06969 HemN C-terminal domain LQ331_RS15700 PF04055 Radical SAM superfamily LQ331_RS15715 PF00557 Metallopeptidase family M24 LQ331_RS15720 PF05195 Aminopeptidase P, N-terminal domain LQ331_RS15720 PF00557 Metallopeptidase family M24 LQ331_RS15725 PF03695 Uncharacterised protein family (UPF0149) LQ331_RS15735 PF05164 Cell division protein ZapA LQ331_RS15745 PF01812 5-formyltetrahydrofolate cyclo-ligase family LQ331_RS15755 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LQ331_RS15765 PF13369 Transglutaminase-like superfamily LQ331_RS15770 PF00301 Rubredoxin LQ331_RS15775 PF02581 Thiamine monophosphate synthase LQ331_RS15780 PF00202 Aminotransferase class-III LQ331_RS15785 PF00127 Copper binding proteins, plastocyanin/azurin family LQ331_RS15795 PF00202 Aminotransferase class-III LQ331_RS15800 PF00027 Cyclic nucleotide-binding domain LQ331_RS15800 PF00520 Ion transport protein LQ331_RS15805 PF12889 Protein of unknown function (DUF3829) LQ331_RS15830 PF01569 PAP2 superfamily LQ331_RS15840 PF01225 Mur ligase family, catalytic domain LQ331_RS15840 PF02875 Mur ligase family, glutamate ligase domain LQ331_RS15840 PF08245 Mur ligase middle domain LQ331_RS15850 PF00365 Phosphofructokinase LQ331_RS15865 PF03030 Inorganic H+ pyrophosphatase LQ331_RS15870 PF03544 Gram-negative bacterial TonB protein C-terminal LQ331_RS15875 PF02472 Biopolymer transport protein ExbD/TolR LQ331_RS15880 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS15885 PF04304 Protein of unknown function (DUF454) LQ331_RS15890 PF01126 Heme oxygenase LQ331_RS15900 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS15900 PF00593 TonB dependent receptor LQ331_RS15920 PF00719 Inorganic pyrophosphatase LQ331_RS15935 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS15935 PF00593 TonB dependent receptor LQ331_RS15940 PF01965 DJ-1/PfpI family LQ331_RS15940 PF12833 Helix-turn-helix domain LQ331_RS15945 PF00072 Response regulator receiver domain LQ331_RS15945 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS15955 PF01964 Radical SAM ThiC family LQ331_RS15955 PF13667 ThiC-associated domain LQ331_RS15960 PF02028 BCCT, betaine/carnitine/choline family transporter LQ331_RS15970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LQ331_RS15970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LQ331_RS15975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQ331_RS15975 PF00205 Thiamine pyrophosphate enzyme, central domain LQ331_RS15975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQ331_RS15985 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS15990 PF00682 HMGL-like LQ331_RS15990 PF08502 LeuA allosteric (dimerisation) domain LQ331_RS16000 PF00330 Aconitase family (aconitate hydratase) LQ331_RS16005 PF00694 Aconitase C-terminal domain LQ331_RS16010 PF00180 Isocitrate/isopropylmalate dehydrogenase LQ331_RS16020 PF03466 LysR substrate binding domain LQ331_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS16025 PF00873 AcrB/AcrD/AcrF family LQ331_RS16030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS16045 PF02321 Outer membrane efflux protein LQ331_RS16050 PF13520 Amino acid permease LQ331_RS16055 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LQ331_RS16060 PF03279 Bacterial lipid A biosynthesis acyltransferase LQ331_RS16095 PF00390 Malic enzyme, N-terminal domain LQ331_RS16095 PF03949 Malic enzyme, NAD binding domain LQ331_RS16095 PF01515 Phosphate acetyl/butaryl transferase LQ331_RS16100 PF00375 Sodium:dicarboxylate symporter family LQ331_RS16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS16110 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS16115 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS16115 PF00072 Response regulator receiver domain LQ331_RS16125 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS16125 PF08521 Two-component sensor kinase N-terminal LQ331_RS16130 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS16130 PF00072 Response regulator receiver domain LQ331_RS16140 PF03600 Citrate transporter LQ331_RS16145 PF00106 short chain dehydrogenase LQ331_RS16165 PF03193 RsgA GTPase LQ331_RS16170 PF00155 Aminotransferase class I and II LQ331_RS16185 PF01522 Polysaccharide deacetylase LQ331_RS16190 PF00462 Glutaredoxin LQ331_RS16205 PF03797 Autotransporter beta-domain LQ331_RS16205 PF12951 Passenger-associated-transport-repeat LQ331_RS16205 PF00082 Subtilase family LQ331_RS16210 PF01979 Amidohydrolase family LQ331_RS16215 PF01979 Amidohydrolase family LQ331_RS16215 PF00449 Urease alpha-subunit, N-terminal domain LQ331_RS16220 PF01323 DSBA-like thioredoxin domain LQ331_RS16225 PF02645 Uncharacterised protein, DegV family COG1307 LQ331_RS16235 PF02321 Outer membrane efflux protein LQ331_RS16240 PF13533 Biotin-lipoyl like LQ331_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS16250 PF03466 LysR substrate binding domain LQ331_RS16265 PF00563 EAL domain LQ331_RS16265 PF01590 GAF domain LQ331_RS16265 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS16265 PF00360 Phytochrome region LQ331_RS16270 PF00756 Putative esterase LQ331_RS16280 PF00107 Zinc-binding dehydrogenase LQ331_RS16280 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS16285 PF02583 Metal-sensitive transcriptional repressor LQ331_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS16290 PF03466 LysR substrate binding domain LQ331_RS16295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQ331_RS16320 PF03466 LysR substrate binding domain LQ331_RS16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS16325 PF00107 Zinc-binding dehydrogenase LQ331_RS16325 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS16330 PF04107 Glutamate-cysteine ligase family 2(GCS2) LQ331_RS16340 PF12833 Helix-turn-helix domain LQ331_RS16340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQ331_RS16345 PF10996 Beta-Casp domain LQ331_RS16345 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LQ331_RS16345 PF00753 Metallo-beta-lactamase superfamily LQ331_RS16350 PF01926 50S ribosome-binding GTPase LQ331_RS16355 PF00034 Cytochrome c LQ331_RS16360 PF01323 DSBA-like thioredoxin domain LQ331_RS16365 PF01323 DSBA-like thioredoxin domain LQ331_RS16375 PF00892 EamA-like transporter family LQ331_RS16380 PF01037 Lrp/AsnC ligand binding domain LQ331_RS16390 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS16390 PF00593 TonB dependent receptor LQ331_RS16395 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS16395 PF00593 TonB dependent receptor LQ331_RS16405 PF02472 Biopolymer transport protein ExbD/TolR LQ331_RS16410 PF01464 Transglycosylase SLT domain LQ331_RS16410 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LQ331_RS16415 PF12627 Probable RNA and SrmB- binding site of polymerase A LQ331_RS16415 PF01966 HD domain LQ331_RS16415 PF01743 Poly A polymerase head domain LQ331_RS16440 PF03797 Autotransporter beta-domain LQ331_RS16440 PF13018 Extended Signal Peptide of Type V secretion system LQ331_RS16440 PF03212 Pertactin LQ331_RS16440 PF16168 Adhesin of bacterial autotransporter system, probable stalk LQ331_RS16450 PF01979 Amidohydrolase family LQ331_RS16455 PF01380 SIS domain LQ331_RS16460 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS16465 PF07690 Major Facilitator Superfamily LQ331_RS16470 PF02685 Glucokinase LQ331_RS16480 PF07691 PA14 domain LQ331_RS16480 PF02838 Glycosyl hydrolase family 20, domain 2 LQ331_RS16480 PF00728 Glycosyl hydrolase family 20, catalytic domain LQ331_RS16500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQ331_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS16525 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS16530 PF00072 Response regulator receiver domain LQ331_RS16535 PF00360 Phytochrome region LQ331_RS16535 PF01590 GAF domain LQ331_RS16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS16535 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS16535 PF08446 PAS fold LQ331_RS16540 PF04972 BON domain LQ331_RS16545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ331_RS16545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQ331_RS16550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQ331_RS16550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LQ331_RS16565 PF11818 C-terminal domain of tail specific protease (DUF3340) LQ331_RS16565 PF03572 Peptidase family S41 LQ331_RS16565 PF17804 Tail specific protease N-terminal domain LQ331_RS16565 PF00595 PDZ domain LQ331_RS16570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LQ331_RS16570 PF04055 Radical SAM superfamily LQ331_RS16575 PF03099 Biotin/lipoate A/B protein ligase family LQ331_RS16580 PF04359 Protein of unknown function (DUF493) LQ331_RS16590 PF07943 Penicillin-binding protein 5, C-terminal domain LQ331_RS16590 PF00768 D-alanyl-D-alanine carboxypeptidase LQ331_RS16595 PF03330 Lytic transglycolase LQ331_RS16595 PF05036 Sporulation related domain LQ331_RS16600 PF13406 Transglycosylase SLT domain LQ331_RS16605 PF01098 Cell cycle protein LQ331_RS16610 PF01098 Cell cycle protein LQ331_RS16615 PF00905 Penicillin binding protein transpeptidase domain LQ331_RS16615 PF03717 Penicillin-binding Protein dimerisation domain LQ331_RS16625 PF04085 rod shape-determining protein MreC LQ331_RS16635 PF00294 pfkB family carbohydrate kinase LQ331_RS16650 PF11838 ERAP1-like C-terminal domain LQ331_RS16650 PF01433 Peptidase family M1 domain LQ331_RS16655 PF01209 ubiE/COQ5 methyltransferase family LQ331_RS16680 PF02321 Outer membrane efflux protein LQ331_RS16685 PF00873 AcrB/AcrD/AcrF family LQ331_RS16690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS16690 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS16695 PF08361 MAATS-type transcriptional repressor, C-terminal region LQ331_RS16695 PF00440 Bacterial regulatory proteins, tetR family LQ331_RS16700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ331_RS16700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQ331_RS16705 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS16705 PF07724 AAA domain (Cdc48 subfamily) LQ331_RS16705 PF10431 C-terminal, D2-small domain, of ClpB protein LQ331_RS16710 PF00227 Proteasome subunit LQ331_RS16715 PF02899 Phage integrase, N-terminal SAM-like domain LQ331_RS16715 PF00589 Phage integrase family LQ331_RS16725 PF01678 Diaminopimelate epimerase LQ331_RS16735 PF04304 Protein of unknown function (DUF454) LQ331_RS16740 PF00326 Prolyl oligopeptidase family LQ331_RS16740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LQ331_RS16745 PF00155 Aminotransferase class I and II LQ331_RS16750 PF00326 Prolyl oligopeptidase family LQ331_RS16750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LQ331_RS16765 PF00528 Binding-protein-dependent transport system inner membrane component LQ331_RS16770 PF00005 ABC transporter LQ331_RS16770 PF09383 NIL domain LQ331_RS16775 PF00892 EamA-like transporter family LQ331_RS16780 PF04461 Protein of unknown function (DUF520) LQ331_RS16795 PF01432 Peptidase family M3 LQ331_RS16805 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS16810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ331_RS16825 PF01380 SIS domain LQ331_RS16830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS16835 PF00005 ABC transporter LQ331_RS16840 PF00005 ABC transporter LQ331_RS16840 PF02687 FtsX-like permease family LQ331_RS16840 PF12704 MacB-like periplasmic core domain LQ331_RS16845 PF02687 FtsX-like permease family LQ331_RS16845 PF12704 MacB-like periplasmic core domain LQ331_RS16855 PF02954 Bacterial regulatory protein, Fis family LQ331_RS16855 PF00072 Response regulator receiver domain LQ331_RS16855 PF00158 Sigma-54 interaction domain LQ331_RS16860 PF00989 PAS fold LQ331_RS16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS16860 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS16870 PF00132 Bacterial transferase hexapeptide (six repeats) LQ331_RS16870 PF14602 Hexapeptide repeat of succinyl-transferase LQ331_RS16870 PF12804 MobA-like NTP transferase domain LQ331_RS16880 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LQ331_RS16880 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LQ331_RS16885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ331_RS16885 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQ331_RS16890 PF00231 ATP synthase LQ331_RS16895 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQ331_RS16895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ331_RS16895 PF00306 ATP synthase alpha/beta chain, C terminal domain LQ331_RS16900 PF00213 ATP synthase delta (OSCP) subunit LQ331_RS16905 PF00430 ATP synthase B/B' CF(0) LQ331_RS16910 PF00137 ATP synthase subunit C LQ331_RS16915 PF00119 ATP synthase A chain LQ331_RS16930 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS16930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQ331_RS16935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQ331_RS16935 PF00364 Biotin-requiring enzyme LQ331_RS16935 PF02817 e3 binding domain LQ331_RS16950 PF01266 FAD dependent oxidoreductase LQ331_RS16950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQ331_RS16955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQ331_RS16955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQ331_RS16960 PF03180 NLPA lipoprotein LQ331_RS16980 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LQ331_RS16980 PF03900 Porphobilinogen deaminase, C-terminal domain LQ331_RS16985 PF04397 LytTr DNA-binding domain LQ331_RS16985 PF00072 Response regulator receiver domain LQ331_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS16990 PF06580 Histidine kinase LQ331_RS16995 PF02230 Phospholipase/Carboxylesterase LQ331_RS17000 PF13632 Glycosyl transferase family group 2 LQ331_RS17005 PF00593 TonB dependent receptor LQ331_RS17005 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS17015 PF10947 Protein of unknown function (DUF2628) LQ331_RS17040 PF07690 Major Facilitator Superfamily LQ331_RS17060 PF00082 Subtilase family LQ331_RS17060 PF12951 Passenger-associated-transport-repeat LQ331_RS17060 PF03797 Autotransporter beta-domain LQ331_RS17085 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS17085 PF00593 TonB dependent receptor LQ331_RS17120 PF07681 DoxX LQ331_RS17140 PF04546 Sigma-70, non-essential region LQ331_RS17140 PF03979 Sigma-70 factor, region 1.1 LQ331_RS17140 PF00140 Sigma-70 factor, region 1.2 LQ331_RS17140 PF04542 Sigma-70 region 2 LQ331_RS17140 PF04539 Sigma-70 region 3 LQ331_RS17140 PF04545 Sigma-70, region 4 LQ331_RS17145 PF02580 D-Tyr-tRNA(Tyr) deacylase LQ331_RS17155 PF00925 GTP cyclohydrolase II LQ331_RS17175 PF00535 Glycosyl transferase family 2 LQ331_RS17180 PF13439 Glycosyltransferase Family 4 LQ331_RS17180 PF00534 Glycosyl transferases group 1 LQ331_RS17190 PF01189 16S rRNA methyltransferase RsmB/F LQ331_RS17190 PF01029 NusB family LQ331_RS17195 PF02911 Formyl transferase, C-terminal domain LQ331_RS17195 PF00551 Formyl transferase LQ331_RS17200 PF01327 Polypeptide deformylase LQ331_RS17210 PF02481 DNA recombination-mediator protein A LQ331_RS17210 PF17782 DprA winged helix domain LQ331_RS17215 PF04361 Protein of unknown function (DUF494) LQ331_RS17220 PF07963 Prokaryotic N-terminal methylation motif LQ331_RS17220 PF00114 Pilin (bacterial filament) LQ331_RS17225 PF06271 RDD family LQ331_RS17230 PF01131 DNA topoisomerase LQ331_RS17230 PF01751 Toprim domain LQ331_RS17230 PF13368 Topoisomerase C-terminal repeat LQ331_RS17235 PF01300 Telomere recombination LQ331_RS17260 PF01343 Peptidase family S49 LQ331_RS17265 PF01554 MatE LQ331_RS17280 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LQ331_RS17280 PF00270 DEAD/DEAH box helicase LQ331_RS17280 PF00271 Helicase conserved C-terminal domain LQ331_RS17280 PF17764 3′ DNA-binding domain (3′BD) LQ331_RS17280 PF18074 Primosomal protein N C-terminal domain LQ331_RS17285 PF13417 Glutathione S-transferase, N-terminal domain LQ331_RS17285 PF00043 Glutathione S-transferase, C-terminal domain LQ331_RS17295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS17310 PF01541 GIY-YIG catalytic domain LQ331_RS17315 PF03458 UPF0126 domain LQ331_RS17320 PF00793 DAHP synthetase I family LQ331_RS17340 PF01047 MarR family LQ331_RS17345 PF00672 HAMP domain LQ331_RS17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS17345 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS17350 PF00072 Response regulator receiver domain LQ331_RS17350 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS17370 PF00118 TCP-1/cpn60 chaperonin family LQ331_RS17375 PF00166 Chaperonin 10 Kd subunit LQ331_RS17380 PF04231 Endonuclease I LQ331_RS17385 PF03091 CutA1 divalent ion tolerance protein LQ331_RS17390 PF11412 Disulphide bond corrector protein DsbC LQ331_RS17390 PF02683 Cytochrome C biogenesis protein transmembrane region LQ331_RS17395 PF08534 Redoxin LQ331_RS17400 PF00667 FAD binding domain LQ331_RS17400 PF00175 Oxidoreductase NAD-binding domain LQ331_RS17400 PF00258 Flavodoxin LQ331_RS17405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS17405 PF02203 Tar ligand binding domain homologue LQ331_RS17405 PF00672 HAMP domain LQ331_RS17410 PF00797 N-acetyltransferase LQ331_RS17420 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS17420 PF00072 Response regulator receiver domain LQ331_RS17425 PF07730 Histidine kinase LQ331_RS17435 PF03055 Retinal pigment epithelial membrane protein LQ331_RS17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS17445 PF03466 LysR substrate binding domain LQ331_RS17460 PF00245 Alkaline phosphatase LQ331_RS17465 PF07943 Penicillin-binding protein 5, C-terminal domain LQ331_RS17465 PF00768 D-alanyl-D-alanine carboxypeptidase LQ331_RS17475 PF02525 Flavodoxin-like fold LQ331_RS17495 PF01220 Dehydroquinase class II LQ331_RS17500 PF00364 Biotin-requiring enzyme LQ331_RS17505 PF02785 Biotin carboxylase C-terminal domain LQ331_RS17505 PF00289 Biotin carboxylase, N-terminal domain LQ331_RS17505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQ331_RS17530 PF02954 Bacterial regulatory protein, Fis family LQ331_RS17540 PF01553 Acyltransferase LQ331_RS17550 PF00782 Dual specificity phosphatase, catalytic domain LQ331_RS17555 PF12147 Putative methyltransferase LQ331_RS17555 PF12146 Serine aminopeptidase, S33 LQ331_RS17560 PF01066 CDP-alcohol phosphatidyltransferase LQ331_RS17565 PF01808 AICARFT/IMPCHase bienzyme LQ331_RS17565 PF02142 MGS-like domain LQ331_RS17570 PF02844 Phosphoribosylglycinamide synthetase, N domain LQ331_RS17570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LQ331_RS17570 PF02843 Phosphoribosylglycinamide synthetase, C domain LQ331_RS17585 PF04545 Sigma-70, region 4 LQ331_RS17585 PF00140 Sigma-70 factor, region 1.2 LQ331_RS17585 PF04542 Sigma-70 region 2 LQ331_RS17590 PF03167 Uracil DNA glycosylase superfamily LQ331_RS17595 PF00072 Response regulator receiver domain LQ331_RS17595 PF01339 CheB methylesterase LQ331_RS17600 PF18075 FtsX extracellular domain LQ331_RS17605 PF00005 ABC transporter LQ331_RS17610 PF00270 DEAD/DEAH box helicase LQ331_RS17610 PF00271 Helicase conserved C-terminal domain LQ331_RS17610 PF12300 ATP-dependent RNA helicase RhlB LQ331_RS17615 PF00085 Thioredoxin LQ331_RS17620 PF07497 Rho termination factor, RNA-binding domain LQ331_RS17620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQ331_RS17620 PF07498 Rho termination factor, N-terminal domain LQ331_RS17625 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS17625 PF07694 5TMR of 5TMR-LYT LQ331_RS17635 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LQ331_RS17660 PF03971 Monomeric isocitrate dehydrogenase LQ331_RS17670 PF04972 BON domain LQ331_RS17670 PF01476 LysM domain LQ331_RS17675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LQ331_RS17675 PF14489 QueF-like protein LQ331_RS17680 PF01546 Peptidase family M20/M25/M40 LQ331_RS17680 PF07687 Peptidase dimerisation domain LQ331_RS17685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS17690 PF00873 AcrB/AcrD/AcrF family LQ331_RS17695 PF00873 AcrB/AcrD/AcrF family LQ331_RS17700 PF12805 FUSC-like inner membrane protein yccS LQ331_RS17705 PF00106 short chain dehydrogenase LQ331_RS17710 PF07690 Major Facilitator Superfamily LQ331_RS17735 PF09297 NADH pyrophosphatase zinc ribbon domain LQ331_RS17735 PF00293 NUDIX domain LQ331_RS17735 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LQ331_RS17740 PF01521 Iron-sulphur cluster biosynthesis LQ331_RS17760 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS17760 PF00072 Response regulator receiver domain LQ331_RS17760 PF00563 EAL domain LQ331_RS17765 PF00672 HAMP domain LQ331_RS17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS17765 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS17765 PF01627 Hpt domain LQ331_RS17765 PF00072 Response regulator receiver domain LQ331_RS17765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQ331_RS17770 PF00210 Ferritin-like domain LQ331_RS17780 PF00293 NUDIX domain LQ331_RS17795 PF00380 Ribosomal protein S9/S16 LQ331_RS17800 PF00572 Ribosomal protein L13 LQ331_RS17805 PF03232 Ubiquinone biosynthesis protein COQ7 LQ331_RS17810 PF00893 Small Multidrug Resistance protein LQ331_RS17815 PF02675 S-adenosylmethionine decarboxylase LQ331_RS17820 PF00325 Bacterial regulatory proteins, crp family LQ331_RS17820 PF00027 Cyclic nucleotide-binding domain LQ331_RS17825 PF01925 Sulfite exporter TauE/SafE LQ331_RS17835 PF00218 Indole-3-glycerol phosphate synthase LQ331_RS17840 PF02885 Glycosyl transferase family, helical bundle domain LQ331_RS17840 PF00591 Glycosyl transferase family, a/b domain LQ331_RS17845 PF00117 Glutamine amidotransferase class-I LQ331_RS17855 PF04715 Anthranilate synthase component I, N terminal region LQ331_RS17855 PF00425 chorismate binding enzyme LQ331_RS17860 PF00781 Diacylglycerol kinase catalytic domain LQ331_RS17870 PF00834 Ribulose-phosphate 3 epimerase family LQ331_RS17875 PF00226 DnaJ domain LQ331_RS17875 PF05099 Tellurite resistance protein TerB LQ331_RS17880 PF01259 SAICAR synthetase LQ331_RS17890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQ331_RS17890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LQ331_RS17890 PF00361 Proton-conducting membrane transporter LQ331_RS17890 PF13244 Domain of unknown function (DUF4040) LQ331_RS17895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQ331_RS17900 PF00361 Proton-conducting membrane transporter LQ331_RS17905 PF01899 Na+/H+ ion antiporter subunit LQ331_RS17910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LQ331_RS17915 PF03334 Na+/H+ antiporter subunit LQ331_RS17920 PF01699 Sodium/calcium exchanger protein LQ331_RS17935 PF04209 homogentisate 1,2-dioxygenase LQ331_RS17940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQ331_RS17945 PF01047 MarR family LQ331_RS17960 PF00854 POT family LQ331_RS17965 PF03301 Tryptophan 2,3-dioxygenase LQ331_RS17970 PF00676 Dehydrogenase E1 component LQ331_RS17975 PF02780 Transketolase, C-terminal domain LQ331_RS17975 PF02779 Transketolase, pyrimidine binding domain LQ331_RS17985 PF02817 e3 binding domain LQ331_RS17985 PF00364 Biotin-requiring enzyme LQ331_RS17985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQ331_RS17995 PF00665 Integrase core domain LQ331_RS18000 PF08279 HTH domain LQ331_RS18000 PF13280 WYL domain LQ331_RS18010 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS18015 PF05661 Protein of unknown function (DUF808) LQ331_RS18020 PF03109 ABC1 family LQ331_RS18025 PF00884 Sulfatase LQ331_RS18030 PF12794 Mechanosensitive ion channel inner membrane domain 1 LQ331_RS18030 PF12795 Mechanosensitive ion channel porin domain LQ331_RS18030 PF00924 Mechanosensitive ion channel LQ331_RS18045 PF01266 FAD dependent oxidoreductase LQ331_RS18045 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQ331_RS18065 PF00072 Response regulator receiver domain LQ331_RS18065 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS18070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS18080 PF17810 Arginine decarboxylase helical bundle domain LQ331_RS18080 PF17944 Arginine decarboxylase C-terminal helical extension LQ331_RS18080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQ331_RS18085 PF17284 Spermidine synthase tetramerisation domain LQ331_RS18095 PF00561 alpha/beta hydrolase fold LQ331_RS18110 PF00543 Nitrogen regulatory protein P-II LQ331_RS18115 PF04380 Membrane fusogenic activity LQ331_RS18175 PF01078 Magnesium chelatase, subunit ChlI LQ331_RS18175 PF13335 Magnesium chelatase, subunit ChlI C-terminal LQ331_RS18195 PF06055 Exopolysaccharide synthesis, ExoD LQ331_RS18200 PF07995 Glucose / Sorbosone dehydrogenase LQ331_RS18215 PF01483 Proprotein convertase P-domain LQ331_RS18215 PF00082 Subtilase family LQ331_RS18225 PF02630 SCO1/SenC LQ331_RS18230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LQ331_RS18235 PF00510 Cytochrome c oxidase subunit III LQ331_RS18240 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQ331_RS18245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQ331_RS18245 PF06481 COX Aromatic Rich Motif LQ331_RS18250 PF00155 Aminotransferase class I and II LQ331_RS18250 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS18265 PF00155 Aminotransferase class I and II LQ331_RS18265 PF00392 Bacterial regulatory proteins, gntR family LQ331_RS18270 PF00266 Aminotransferase class-V LQ331_RS18325 PF02667 Short chain fatty acid transporter LQ331_RS18330 PF01040 UbiA prenyltransferase family LQ331_RS18370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQ331_RS18375 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS18375 PF00593 TonB dependent receptor LQ331_RS18380 PF16338 Domain of unknown function (DUF4968) LQ331_RS18380 PF17137 Domain of unknown function (DUF5110) LQ331_RS18380 PF01055 Glycosyl hydrolases family 31 LQ331_RS18385 PF01380 SIS domain LQ331_RS18390 PF00480 ROK family LQ331_RS18395 PF08013 Tagatose 6 phosphate kinase LQ331_RS18400 PF08220 DeoR-like helix-turn-helix domain LQ331_RS18400 PF00455 DeoR C terminal sensor domain LQ331_RS18405 PF01979 Amidohydrolase family LQ331_RS18410 PF00083 Sugar (and other) transporter LQ331_RS18430 PF05860 haemagglutination activity domain LQ331_RS18430 PF04829 Pre-toxin domain with VENN motif LQ331_RS18430 PF13332 Hemagglutinin repeat LQ331_RS18440 PF12106 Colicin E5 ribonuclease domain LQ331_RS18440 PF13332 Hemagglutinin repeat LQ331_RS18450 PF13332 Hemagglutinin repeat LQ331_RS18450 PF04829 Pre-toxin domain with VENN motif LQ331_RS18450 PF05594 Haemagluttinin repeat LQ331_RS18460 PF05860 haemagglutination activity domain LQ331_RS18460 PF13332 Hemagglutinin repeat LQ331_RS18460 PF04829 Pre-toxin domain with VENN motif LQ331_RS18465 PF08479 POTRA domain, ShlB-type LQ331_RS18465 PF17287 POTRA domain LQ331_RS18465 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LQ331_RS18470 PF00156 Phosphoribosyl transferase domain LQ331_RS18480 PF00654 Voltage gated chloride channel LQ331_RS18485 PF06968 Biotin and Thiamin Synthesis associated domain LQ331_RS18485 PF04055 Radical SAM superfamily LQ331_RS18490 PF00155 Aminotransferase class I and II LQ331_RS18495 PF12697 Alpha/beta hydrolase family LQ331_RS18500 PF00106 short chain dehydrogenase LQ331_RS18505 PF13649 Methyltransferase domain LQ331_RS18515 PF00291 Pyridoxal-phosphate dependent enzyme LQ331_RS18525 PF01134 Glucose inhibited division protein A LQ331_RS18525 PF13932 GidA associated domain LQ331_RS18530 PF02321 Outer membrane efflux protein LQ331_RS18530 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LQ331_RS18535 PF00873 AcrB/AcrD/AcrF family LQ331_RS18540 PF00529 HlyD membrane-fusion protein of T1SS LQ331_RS18540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS18545 PF00672 HAMP domain LQ331_RS18545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS18545 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS18550 PF00072 Response regulator receiver domain LQ331_RS18550 PF00486 Transcriptional regulatory protein, C terminal LQ331_RS18555 PF10127 RNA repair pathway DNA polymerase beta family LQ331_RS18560 PF00132 Bacterial transferase hexapeptide (six repeats) LQ331_RS18585 PF17863 AAA lid domain LQ331_RS18585 PF07726 ATPase family associated with various cellular activities (AAA) LQ331_RS18600 PF03738 Glutathionylspermidine synthase preATP-grasp LQ331_RS18610 PF00920 Dehydratase family LQ331_RS18615 PF06733 DEAD_2 LQ331_RS18615 PF13307 Helicase C-terminal domain LQ331_RS18625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LQ331_RS18625 PF01488 Shikimate / quinate 5-dehydrogenase LQ331_RS18625 PF08501 Shikimate dehydrogenase substrate binding domain LQ331_RS18640 PF00490 Delta-aminolevulinic acid dehydratase LQ331_RS18645 PF01062 Bestrophin, RFP-TM, chloride channel LQ331_RS18670 PF00326 Prolyl oligopeptidase family LQ331_RS18670 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LQ331_RS18675 PF00043 Glutathione S-transferase, C-terminal domain LQ331_RS18675 PF02798 Glutathione S-transferase, N-terminal domain LQ331_RS18680 PF03350 Uncharacterized protein family, UPF0114 LQ331_RS18695 PF12833 Helix-turn-helix domain LQ331_RS18695 PF02311 AraC-like ligand binding domain LQ331_RS18710 PF00005 ABC transporter LQ331_RS18715 PF00561 alpha/beta hydrolase fold LQ331_RS18730 PF18416 N-acetylglucosamine binding protein domain 2 LQ331_RS18730 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LQ331_RS18735 PF18416 N-acetylglucosamine binding protein domain 2 LQ331_RS18735 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LQ331_RS18740 PF00111 2Fe-2S iron-sulfur cluster binding domain LQ331_RS18740 PF00175 Oxidoreductase NAD-binding domain LQ331_RS18740 PF00970 Oxidoreductase FAD-binding domain LQ331_RS18745 PF00005 ABC transporter LQ331_RS18750 PF01061 ABC-2 type transporter LQ331_RS18760 PF02558 Ketopantoate reductase PanE/ApbA LQ331_RS18760 PF08546 Ketopantoate reductase PanE/ApbA C terminal LQ331_RS18770 PF01026 TatD related DNase LQ331_RS18775 PF00270 DEAD/DEAH box helicase LQ331_RS18775 PF04408 Helicase associated domain (HA2) LQ331_RS18775 PF00271 Helicase conserved C-terminal domain LQ331_RS18775 PF08482 ATP-dependent helicase C-terminal LQ331_RS18785 PF00849 RNA pseudouridylate synthase LQ331_RS18800 PF00248 Aldo/keto reductase family LQ331_RS18815 PF01139 tRNA-splicing ligase RtcB LQ331_RS18830 PF00672 HAMP domain LQ331_RS18830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS18830 PF02203 Tar ligand binding domain homologue LQ331_RS18835 PF03466 LysR substrate binding domain LQ331_RS18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS18840 PF07690 Major Facilitator Superfamily LQ331_RS18845 PF00248 Aldo/keto reductase family LQ331_RS18850 PF00561 alpha/beta hydrolase fold LQ331_RS18855 PF01906 Putative heavy-metal-binding LQ331_RS18860 PF13380 CoA binding domain LQ331_RS18860 PF00583 Acetyltransferase (GNAT) family LQ331_RS18860 PF13607 Succinyl-CoA ligase like flavodoxin domain LQ331_RS18865 PF01769 Divalent cation transporter LQ331_RS18865 PF03448 MgtE intracellular N domain LQ331_RS18865 PF00571 CBS domain LQ331_RS18870 PF00999 Sodium/hydrogen exchanger family LQ331_RS18870 PF02254 TrkA-N domain LQ331_RS18875 PF12796 Ankyrin repeats (3 copies) LQ331_RS18875 PF02661 Fic/DOC family LQ331_RS18880 PF05166 YcgL domain LQ331_RS18890 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ331_RS18890 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ331_RS18905 PF00109 Beta-ketoacyl synthase, N-terminal domain LQ331_RS18905 PF02801 Beta-ketoacyl synthase, C-terminal domain LQ331_RS18915 PF01494 FAD binding domain LQ331_RS18935 PF00221 Aromatic amino acid lyase LQ331_RS18945 PF00535 Glycosyl transferase family 2 LQ331_RS18960 PF00550 Phosphopantetheine attachment site LQ331_RS18965 PF00550 Phosphopantetheine attachment site LQ331_RS18980 PF02322 Cytochrome bd terminal oxidase subunit II LQ331_RS18985 PF01654 Cytochrome bd terminal oxidase subunit I LQ331_RS19005 PF04542 Sigma-70 region 2 LQ331_RS19005 PF08281 Sigma-70, region 4 LQ331_RS19020 PF13344 Haloacid dehalogenase-like hydrolase LQ331_RS19020 PF00293 NUDIX domain LQ331_RS19040 PF01218 Coproporphyrinogen III oxidase LQ331_RS19050 PF04239 Protein of unknown function (DUF421) LQ331_RS19055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQ331_RS19055 PF00476 DNA polymerase family A LQ331_RS19055 PF01612 3'-5' exonuclease LQ331_RS19055 PF01367 5'-3' exonuclease, C-terminal SAM fold LQ331_RS19065 PF00582 Universal stress protein family LQ331_RS19090 PF00580 UvrD/REP helicase N-terminal domain LQ331_RS19090 PF13361 UvrD-like helicase C-terminal domain LQ331_RS19100 PF13091 PLD-like domain LQ331_RS19100 PF13396 Phospholipase_D-nuclease N-terminal LQ331_RS19105 PF00471 Ribosomal protein L33 LQ331_RS19110 PF00830 Ribosomal L28 family LQ331_RS19115 PF03033 Glycosyltransferase family 28 N-terminal domain LQ331_RS19120 PF00929 Exonuclease LQ331_RS19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS19125 PF03466 LysR substrate binding domain LQ331_RS19130 PF01042 Endoribonuclease L-PSP LQ331_RS19140 PF02321 Outer membrane efflux protein LQ331_RS19145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQ331_RS19150 PF00873 AcrB/AcrD/AcrF family LQ331_RS19165 PF00535 Glycosyl transferase family 2 LQ331_RS19170 PF01370 NAD dependent epimerase/dehydratase family LQ331_RS19180 PF17762 HTH domain found in ParB protein LQ331_RS19180 PF02195 ParB-like nuclease domain LQ331_RS19185 PF13614 AAA domain LQ331_RS19190 PF02527 rRNA small subunit methyltransferase G LQ331_RS19195 PF01648 4'-phosphopantetheinyl transferase superfamily LQ331_RS19200 PF04226 Transglycosylase associated protein LQ331_RS19210 PF00171 Aldehyde dehydrogenase family LQ331_RS19215 PF08946 Osmosensory transporter coiled coil LQ331_RS19215 PF00083 Sugar (and other) transporter LQ331_RS19225 PF16177 Acetyl-coenzyme A synthetase N-terminus LQ331_RS19225 PF00501 AMP-binding enzyme LQ331_RS19225 PF13193 AMP-binding enzyme C-terminal domain LQ331_RS19230 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS19230 PF00072 Response regulator receiver domain LQ331_RS19235 PF02659 Putative manganese efflux pump LQ331_RS19240 PF00072 Response regulator receiver domain LQ331_RS19240 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS19240 PF09456 RcsC Alpha-Beta-Loop (ABL) LQ331_RS19245 PF10459 Peptidase S46 LQ331_RS19250 PF00012 Hsp70 protein LQ331_RS19265 PF04357 TamB, inner membrane protein subunit of TAM complex LQ331_RS19270 PF07244 Surface antigen variable number repeat LQ331_RS19270 PF01103 Surface antigen LQ331_RS19270 PF17243 POTRA domain TamA domain 1 LQ331_RS19275 PF02092 Glycyl-tRNA synthetase beta subunit LQ331_RS19275 PF05746 DALR anticodon binding domain LQ331_RS19280 PF02091 Glycyl-tRNA synthetase alpha subunit LQ331_RS19285 PF00437 Type II/IV secretion system protein LQ331_RS19285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQ331_RS19290 PF00117 Glutamine amidotransferase class-I LQ331_RS19290 PF00958 GMP synthase C terminal domain LQ331_RS19300 PF00902 Sec-independent protein translocase protein (TatC) LQ331_RS19305 PF02416 mttA/Hcf106 family LQ331_RS19310 PF02416 mttA/Hcf106 family LQ331_RS19320 PF00762 Ferrochelatase LQ331_RS19325 PF12697 Alpha/beta hydrolase family LQ331_RS19330 PF02203 Tar ligand binding domain homologue LQ331_RS19330 PF00672 HAMP domain LQ331_RS19330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQ331_RS19385 PF03594 Benzoate membrane transport protein LQ331_RS19395 PF01263 Aldose 1-epimerase LQ331_RS19400 PF13406 Transglycosylase SLT domain LQ331_RS19405 PF10017 Histidine-specific methyltransferase, SAM-dependent LQ331_RS19410 PF03781 Sulfatase-modifying factor enzyme 1 LQ331_RS19410 PF12867 DinB superfamily LQ331_RS19415 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS19420 PF02810 SEC-C motif LQ331_RS19425 PF01925 Sulfite exporter TauE/SafE LQ331_RS19445 PF01227 GTP cyclohydrolase I LQ331_RS19455 PF07869 Protein of unknown function (DUF1656) LQ331_RS19460 PF13533 Biotin-lipoyl like LQ331_RS19465 PF02321 Outer membrane efflux protein LQ331_RS19470 PF04632 Fusaric acid resistance protein family LQ331_RS19480 PF13538 UvrD-like helicase C-terminal domain LQ331_RS19485 PF13361 UvrD-like helicase C-terminal domain LQ331_RS19485 PF00580 UvrD/REP helicase N-terminal domain LQ331_RS19485 PF12705 PD-(D/E)XK nuclease superfamily LQ331_RS19490 PF17946 RecC C-terminal domain LQ331_RS19495 PF00005 ABC transporter LQ331_RS19500 PF02405 Permease MlaE LQ331_RS19505 PF02470 MlaD protein LQ331_RS19520 PF04333 MlaA lipoprotein LQ331_RS19525 PF00255 Glutathione peroxidase LQ331_RS19535 PF02646 RmuC family LQ331_RS19540 PF13417 Glutathione S-transferase, N-terminal domain LQ331_RS19540 PF00043 Glutathione S-transferase, C-terminal domain LQ331_RS19545 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS19545 PF00107 Zinc-binding dehydrogenase LQ331_RS19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS19550 PF03466 LysR substrate binding domain LQ331_RS19555 PF01810 LysE type translocator LQ331_RS19570 PF13520 Amino acid permease LQ331_RS19580 PF10672 S-adenosylmethionine-dependent methyltransferase LQ331_RS19580 PF17785 PUA-like domain LQ331_RS19585 PF03741 Integral membrane protein TerC family LQ331_RS19590 PF01694 Rhomboid family LQ331_RS19595 PF03009 Glycerophosphoryl diester phosphodiesterase family LQ331_RS19600 PF12631 MnmE helical domain LQ331_RS19600 PF01926 50S ribosome-binding GTPase LQ331_RS19600 PF10396 GTP-binding protein TrmE N-terminus LQ331_RS19610 PF14849 YidC periplasmic domain LQ331_RS19610 PF02096 60Kd inner membrane protein LQ331_RS19615 PF00825 Ribonuclease P LQ331_RS19620 PF00468 Ribosomal protein L34 LQ331_RS19625 PF11638 DnaA N-terminal domain LQ331_RS19625 PF00308 Bacterial dnaA protein LQ331_RS19625 PF08299 Bacterial dnaA protein helix-turn-helix LQ331_RS19630 PF02768 DNA polymerase III beta subunit, C-terminal domain LQ331_RS19630 PF02767 DNA polymerase III beta subunit, central domain LQ331_RS19630 PF00712 DNA polymerase III beta subunit, N-terminal domain LQ331_RS19635 PF02463 RecF/RecN/SMC N terminal domain LQ331_RS19640 PF01751 Toprim domain LQ331_RS19640 PF00204 DNA gyrase B LQ331_RS19640 PF00986 DNA gyrase B subunit, carboxyl terminus LQ331_RS19640 PF18053 DNA gyrase B subunit insert domain LQ331_RS19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS19645 PF02517 CPBP intramembrane metalloprotease LQ331_RS19650 PF01435 Peptidase family M48 LQ331_RS19660 PF03544 Gram-negative bacterial TonB protein C-terminal LQ331_RS19665 PF01618 MotA/TolQ/ExbB proton channel family LQ331_RS19670 PF02472 Biopolymer transport protein ExbD/TolR LQ331_RS19675 PF02472 Biopolymer transport protein ExbD/TolR LQ331_RS19680 PF13396 Phospholipase_D-nuclease N-terminal LQ331_RS19680 PF13091 PLD-like domain LQ331_RS19690 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LQ331_RS19695 PF04055 Radical SAM superfamily LQ331_RS19725 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LQ331_RS19730 PF00155 Aminotransferase class I and II LQ331_RS19735 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS19735 PF00593 TonB dependent receptor LQ331_RS19750 PF02735 Ku70/Ku80 beta-barrel domain LQ331_RS19755 PF04679 ATP dependent DNA ligase C terminal region LQ331_RS19755 PF01068 ATP dependent DNA ligase domain LQ331_RS19755 PF13298 DNA polymerase Ligase (LigD) LQ331_RS19765 PF08240 Alcohol dehydrogenase GroES-like domain LQ331_RS19765 PF00107 Zinc-binding dehydrogenase LQ331_RS19770 PF01081 KDPG and KHG aldolase LQ331_RS19780 PF00356 Bacterial regulatory proteins, lacI family LQ331_RS19785 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LQ331_RS19790 PF01037 Lrp/AsnC ligand binding domain LQ331_RS19795 PF01734 Patatin-like phospholipase LQ331_RS19805 PF07715 TonB-dependent Receptor Plug Domain LQ331_RS19805 PF00593 TonB dependent receptor LQ331_RS19810 PF01569 PAP2 superfamily LQ331_RS19825 PF00005 ABC transporter LQ331_RS19840 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQ331_RS19840 PF06827 Zinc finger found in FPG and IleRS LQ331_RS19840 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQ331_RS19845 PF04349 Periplasmic glucan biosynthesis protein, MdoG LQ331_RS19850 PF00265 Thymidine kinase LQ331_RS19865 PF00580 UvrD/REP helicase N-terminal domain LQ331_RS19865 PF13361 UvrD-like helicase C-terminal domain LQ331_RS19875 PF04337 Protein of unknown function, DUF480 LQ331_RS19880 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LQ331_RS19885 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LQ331_RS19895 PF01553 Acyltransferase LQ331_RS19905 PF01171 PP-loop family LQ331_RS19910 PF04381 Putative exonuclease, RdgC LQ331_RS19920 PF02142 MGS-like domain LQ331_RS19925 PF00989 PAS fold LQ331_RS19925 PF01627 Hpt domain LQ331_RS19925 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS19925 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQ331_RS19925 PF00072 Response regulator receiver domain LQ331_RS19930 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQ331_RS19930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQ331_RS19935 PF00310 Glutamine amidotransferases class-II LQ331_RS19935 PF04898 Glutamate synthase central domain LQ331_RS19935 PF01645 Conserved region in glutamate synthase LQ331_RS19935 PF01493 GXGXG motif LQ331_RS19970 PF00144 Beta-lactamase LQ331_RS19995 PF09369 Domain of unknown function (DUF1998) LQ331_RS19995 PF00271 Helicase conserved C-terminal domain LQ331_RS19995 PF00270 DEAD/DEAH box helicase LQ331_RS20025 PF01882 Protein of unknown function DUF58 LQ331_RS20030 PF17863 AAA lid domain LQ331_RS20030 PF07726 ATPase family associated with various cellular activities (AAA) LQ331_RS20050 PF01523 Putative modulator of DNA gyrase LQ331_RS20060 PF07804 HipA-like C-terminal domain LQ331_RS20060 PF13657 HipA N-terminal domain LQ331_RS20080 PF17862 AAA+ lid domain LQ331_RS20080 PF00004 ATPase family associated with various cellular activities (AAA) LQ331_RS20080 PF01434 Peptidase family M41 LQ331_RS20100 PF13091 PLD-like domain LQ331_RS20105 PF03061 Thioesterase superfamily LQ331_RS20110 PF01553 Acyltransferase LQ331_RS20125 PF01161 Phosphatidylethanolamine-binding protein LQ331_RS20140 PF02673 Bacitracin resistance protein BacA LQ331_RS20145 PF03951 Glutamine synthetase, beta-Grasp domain LQ331_RS20145 PF00120 Glutamine synthetase, catalytic domain LQ331_RS20150 PF00543 Nitrogen regulatory protein P-II LQ331_RS20155 PF00909 Ammonium Transporter Family LQ331_RS20165 PF03562 MltA specific insert domain LQ331_RS20165 PF06725 3D domain LQ331_RS20180 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS20180 PF00989 PAS fold LQ331_RS20185 PF00072 Response regulator receiver domain LQ331_RS20185 PF00158 Sigma-54 interaction domain LQ331_RS20185 PF02954 Bacterial regulatory protein, Fis family LQ331_RS20190 PF00080 Copper/zinc superoxide dismutase (SODC) LQ331_RS20195 PF00080 Copper/zinc superoxide dismutase (SODC) LQ331_RS20205 PF02803 Thiolase, C-terminal domain LQ331_RS20205 PF00108 Thiolase, N-terminal domain LQ331_RS20240 PF02556 Preprotein translocase subunit SecB LQ331_RS20245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LQ331_RS20245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LQ331_RS20265 PF01758 Sodium Bile acid symporter family LQ331_RS20270 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQ331_RS20285 PF03358 NADPH-dependent FMN reductase LQ331_RS20315 PF12833 Helix-turn-helix domain LQ331_RS20325 PF04261 Dyp-type peroxidase family LQ331_RS20365 PF00196 Bacterial regulatory proteins, luxR family LQ331_RS20365 PF00072 Response regulator receiver domain LQ331_RS20370 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQ331_RS20370 PF00072 Response regulator receiver domain LQ331_RS20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQ331_RS20370 PF00989 PAS fold LQ331_RS20370 PF01627 Hpt domain LQ331_RS20370 PF00512 His Kinase A (phospho-acceptor) domain LQ331_RS20385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ331_RS20385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ331_RS20385 PF02770 Acyl-CoA dehydrogenase, middle domain LQ331_RS20390 PF00588 SpoU rRNA Methylase family LQ331_RS20400 PF00675 Insulinase (Peptidase family M16) LQ331_RS20400 PF05193 Peptidase M16 inactive domain LQ331_RS20410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQ331_RS20410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQ331_RS20415 PF00561 alpha/beta hydrolase fold LQ331_RS20425 PF00501 AMP-binding enzyme LQ331_RS20430 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LQ331_RS20440 PF07478 D-ala D-ala ligase C-terminus LQ331_RS20440 PF01820 D-ala D-ala ligase N-terminus LQ331_RS20450 PF03109 ABC1 family LQ331_RS20460 PF00132 Bacterial transferase hexapeptide (six repeats) LQ331_RS20465 PF00535 Glycosyl transferase family 2 LQ331_RS20470 PF02585 GlcNAc-PI de-N-acetylase LQ331_RS20475 PF01596 O-methyltransferase LQ331_RS20480 PF04287 tRNA pseudouridine synthase C LQ331_RS20480 PF00849 RNA pseudouridylate synthase LQ331_RS20490 PF00472 RF-1 domain LQ331_RS20500 PF01432 Peptidase family M3 LQ331_RS20515 PF10502 Signal peptidase, peptidase S26 LQ331_RS20520 PF07690 Major Facilitator Superfamily LQ331_RS20525 PF00665 Integrase core domain LQ331_RS20530 PF03466 LysR substrate binding domain LQ331_RS20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQ331_RS20535 PF03466 LysR substrate binding domain LQ331_RS20540 PF01274 Malate synthase LQ331_RS20545 PF00463 Isocitrate lyase family LQ331_RS20550 PF00990 Diguanylate cyclase, GGDEF domain LQ331_RS20570 PF02785 Biotin carboxylase C-terminal domain LQ331_RS20570 PF00289 Biotin carboxylase, N-terminal domain LQ331_RS20570 PF00364 Biotin-requiring enzyme LQ331_RS20570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQ331_RS20575 PF01039 Carboxyl transferase domain LQ331_RS20580 PF02770 Acyl-CoA dehydrogenase, middle domain LQ331_RS20580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQ331_RS20580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQ331_RS20635 PF00005 ABC transporter