locus-tag class description HKK60_RS00005 PF11638 DnaA N-terminal domain HKK60_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HKK60_RS00005 PF00308 Bacterial dnaA protein HKK60_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HKK60_RS00010 PF02767 DNA polymerase III beta subunit, central domain HKK60_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HKK60_RS00015 PF02463 RecF/RecN/SMC N terminal domain HKK60_RS00020 PF00204 DNA gyrase B HKK60_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus HKK60_RS00020 PF18053 DNA gyrase B subunit insert domain HKK60_RS00020 PF01751 Toprim domain HKK60_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS00025 PF02517 CPBP intramembrane metalloprotease HKK60_RS00030 PF01435 Peptidase family M48 HKK60_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal HKK60_RS00045 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS00050 PF02472 Biopolymer transport protein ExbD/TolR HKK60_RS00055 PF02472 Biopolymer transport protein ExbD/TolR HKK60_RS00060 PF13091 PLD-like domain HKK60_RS00060 PF13396 Phospholipase_D-nuclease N-terminal HKK60_RS00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HKK60_RS00075 PF04055 Radical SAM superfamily HKK60_RS00085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HKK60_RS00090 PF00155 Aminotransferase class I and II HKK60_RS00095 PF00593 TonB dependent receptor HKK60_RS00095 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS00110 PF02735 Ku70/Ku80 beta-barrel domain HKK60_RS00115 PF04679 ATP dependent DNA ligase C terminal region HKK60_RS00115 PF01068 ATP dependent DNA ligase domain HKK60_RS00115 PF13298 DNA polymerase Ligase (LigD) HKK60_RS00125 PF00107 Zinc-binding dehydrogenase HKK60_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS00130 PF01081 KDPG and KHG aldolase HKK60_RS00140 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS00145 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HKK60_RS00150 PF01037 Lrp/AsnC ligand binding domain HKK60_RS00155 PF01734 Patatin-like phospholipase HKK60_RS00165 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS00165 PF00593 TonB dependent receptor HKK60_RS00170 PF01569 PAP2 superfamily HKK60_RS00185 PF00005 ABC transporter HKK60_RS00200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKK60_RS00200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKK60_RS00200 PF06827 Zinc finger found in FPG and IleRS HKK60_RS00205 PF04349 Periplasmic glucan biosynthesis protein, MdoG HKK60_RS00210 PF00265 Thymidine kinase HKK60_RS00225 PF00580 UvrD/REP helicase N-terminal domain HKK60_RS00225 PF13361 UvrD-like helicase C-terminal domain HKK60_RS00235 PF04337 Protein of unknown function, DUF480 HKK60_RS00240 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HKK60_RS00245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HKK60_RS00255 PF01553 Acyltransferase HKK60_RS00265 PF01171 PP-loop family HKK60_RS00270 PF04381 Putative exonuclease, RdgC HKK60_RS00280 PF02142 MGS-like domain HKK60_RS00285 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS00285 PF01627 Hpt domain HKK60_RS00285 PF00989 PAS fold HKK60_RS00285 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK60_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS00285 PF00072 Response regulator receiver domain HKK60_RS00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS00290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKK60_RS00295 PF00310 Glutamine amidotransferases class-II HKK60_RS00295 PF04898 Glutamate synthase central domain HKK60_RS00295 PF01645 Conserved region in glutamate synthase HKK60_RS00295 PF01493 GXGXG motif HKK60_RS00330 PF00144 Beta-lactamase HKK60_RS00355 PF09369 Domain of unknown function (DUF1998) HKK60_RS00355 PF00271 Helicase conserved C-terminal domain HKK60_RS00355 PF00270 DEAD/DEAH box helicase HKK60_RS00385 PF01882 Protein of unknown function DUF58 HKK60_RS00390 PF17863 AAA lid domain HKK60_RS00390 PF07726 ATPase family associated with various cellular activities (AAA) HKK60_RS00410 PF01523 Putative modulator of DNA gyrase HKK60_RS00420 PF13657 HipA N-terminal domain HKK60_RS00420 PF07804 HipA-like C-terminal domain HKK60_RS00440 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS00440 PF17862 AAA+ lid domain HKK60_RS00440 PF01434 Peptidase family M41 HKK60_RS00460 PF13091 PLD-like domain HKK60_RS00465 PF03061 Thioesterase superfamily HKK60_RS00470 PF01553 Acyltransferase HKK60_RS00485 PF01161 Phosphatidylethanolamine-binding protein HKK60_RS00500 PF02673 Bacitracin resistance protein BacA HKK60_RS00505 PF03951 Glutamine synthetase, beta-Grasp domain HKK60_RS00505 PF00120 Glutamine synthetase, catalytic domain HKK60_RS00510 PF00543 Nitrogen regulatory protein P-II HKK60_RS00515 PF00909 Ammonium Transporter Family HKK60_RS00520 PF08479 POTRA domain, ShlB-type HKK60_RS00520 PF17287 POTRA domain HKK60_RS00520 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HKK60_RS00525 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS00525 PF04829 Pre-toxin domain with VENN motif HKK60_RS00525 PF05860 haemagglutination activity domain HKK60_RS00525 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS00525 PF13332 Hemagglutinin repeat HKK60_RS00525 PF05860 haemagglutination activity domain HKK60_RS00525 PF13332 Hemagglutinin repeat HKK60_RS00525 PF04829 Pre-toxin domain with VENN motif HKK60_RS00555 PF03562 MltA specific insert domain HKK60_RS00555 PF06725 3D domain HKK60_RS00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS00570 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS00570 PF00989 PAS fold HKK60_RS00575 PF00158 Sigma-54 interaction domain HKK60_RS00575 PF00072 Response regulator receiver domain HKK60_RS00575 PF02954 Bacterial regulatory protein, Fis family HKK60_RS00580 PF00080 Copper/zinc superoxide dismutase (SODC) HKK60_RS00585 PF00080 Copper/zinc superoxide dismutase (SODC) HKK60_RS00595 PF00108 Thiolase, N-terminal domain HKK60_RS00595 PF02803 Thiolase, C-terminal domain HKK60_RS00630 PF02556 Preprotein translocase subunit SecB HKK60_RS00635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HKK60_RS00635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HKK60_RS00655 PF01758 Sodium Bile acid symporter family HKK60_RS00670 PF03358 NADPH-dependent FMN reductase HKK60_RS00695 PF12833 Helix-turn-helix domain HKK60_RS00705 PF04261 Dyp-type peroxidase family HKK60_RS00745 PF00072 Response regulator receiver domain HKK60_RS00745 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS00750 PF01627 Hpt domain HKK60_RS00750 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS00750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS00750 PF00989 PAS fold HKK60_RS00750 PF00072 Response regulator receiver domain HKK60_RS00750 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK60_RS00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK60_RS00765 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS00770 PF00588 SpoU rRNA Methylase family HKK60_RS00780 PF00675 Insulinase (Peptidase family M16) HKK60_RS00780 PF05193 Peptidase M16 inactive domain HKK60_RS00790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKK60_RS00790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKK60_RS00795 PF00561 alpha/beta hydrolase fold HKK60_RS00805 PF00501 AMP-binding enzyme HKK60_RS00810 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HKK60_RS00820 PF01820 D-ala D-ala ligase N-terminus HKK60_RS00820 PF07478 D-ala D-ala ligase C-terminus HKK60_RS00830 PF03109 ABC1 family HKK60_RS00840 PF00132 Bacterial transferase hexapeptide (six repeats) HKK60_RS00845 PF00535 Glycosyl transferase family 2 HKK60_RS00850 PF02585 GlcNAc-PI de-N-acetylase HKK60_RS00855 PF01596 O-methyltransferase HKK60_RS00860 PF04287 tRNA pseudouridine synthase C HKK60_RS00860 PF00849 RNA pseudouridylate synthase HKK60_RS00870 PF00472 RF-1 domain HKK60_RS00880 PF01432 Peptidase family M3 HKK60_RS00895 PF10502 Signal peptidase, peptidase S26 HKK60_RS00900 PF07690 Major Facilitator Superfamily HKK60_RS00905 PF03466 LysR substrate binding domain HKK60_RS00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS00910 PF03466 LysR substrate binding domain HKK60_RS00910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS00915 PF01274 Malate synthase HKK60_RS00920 PF00463 Isocitrate lyase family HKK60_RS00925 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS00945 PF00289 Biotin carboxylase, N-terminal domain HKK60_RS00945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK60_RS00945 PF00364 Biotin-requiring enzyme HKK60_RS00945 PF02785 Biotin carboxylase C-terminal domain HKK60_RS00950 PF01039 Carboxyl transferase domain HKK60_RS00955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK60_RS00955 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS00955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS00985 PF03969 AFG1-like ATPase HKK60_RS01000 PF00317 Ribonucleotide reductase, all-alpha domain HKK60_RS01000 PF03477 ATP cone domain HKK60_RS01000 PF02867 Ribonucleotide reductase, barrel domain HKK60_RS01005 PF00268 Ribonucleotide reductase, small chain HKK60_RS01015 PF01810 LysE type translocator HKK60_RS01020 PF03061 Thioesterase superfamily HKK60_RS01025 PF02146 Sir2 family HKK60_RS01030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK60_RS01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS01035 PF03466 LysR substrate binding domain HKK60_RS01040 PF00551 Formyl transferase HKK60_RS01050 PF00857 Isochorismatase family HKK60_RS01055 PF02677 Epoxyqueuosine reductase QueH HKK60_RS01065 PF00293 NUDIX domain HKK60_RS01065 PF01467 Cytidylyltransferase-like HKK60_RS01070 PF01734 Patatin-like phospholipase HKK60_RS01075 PF06114 IrrE N-terminal-like domain HKK60_RS01075 PF09856 Predicted transcriptional regulator (DUF2083) HKK60_RS01075 PF01381 Helix-turn-helix HKK60_RS01080 PF00171 Aldehyde dehydrogenase family HKK60_RS01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK60_RS01085 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS01090 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS01095 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS01100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKK60_RS01100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HKK60_RS01105 PF02566 OsmC-like protein HKK60_RS01130 PF01207 Dihydrouridine synthase (Dus) HKK60_RS01140 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS01140 PF00072 Response regulator receiver domain HKK60_RS01145 PF00672 HAMP domain HKK60_RS01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS01145 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS01150 PF06167 Glucose-regulated metallo-peptidase M90 HKK60_RS01160 PF02237 Biotin protein ligase C terminal domain HKK60_RS01160 PF08279 HTH domain HKK60_RS01160 PF03099 Biotin/lipoate A/B protein ligase family HKK60_RS01165 PF03309 Type III pantothenate kinase HKK60_RS01180 PF13356 Arm DNA-binding domain HKK60_RS01180 PF00589 Phage integrase family HKK60_RS01215 PF09278 MerR, DNA binding HKK60_RS01215 PF00376 MerR family regulatory protein HKK60_RS01220 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS01220 PF00593 TonB dependent receptor HKK60_RS01235 PF04002 RadC-like JAB domain HKK60_RS01260 PF13148 Protein of unknown function (DUF3987) HKK60_RS01265 PF03389 MobA/MobL family HKK60_RS01310 PF10711 Hypothetical protein (DUF2513) HKK60_RS01340 PF05973 Phage derived protein Gp49-like (DUF891) HKK60_RS01365 PF00491 Arginase family HKK60_RS01375 PF05532 CsbD-like HKK60_RS01385 PF00579 tRNA synthetases class I (W and Y) HKK60_RS01395 PF00753 Metallo-beta-lactamase superfamily HKK60_RS01410 PF00083 Sugar (and other) transporter HKK60_RS01415 PF00892 EamA-like transporter family HKK60_RS01420 PF00892 EamA-like transporter family HKK60_RS01430 PF00005 ABC transporter HKK60_RS01430 PF12704 MacB-like periplasmic core domain HKK60_RS01430 PF02687 FtsX-like permease family HKK60_RS01440 PF00005 ABC transporter HKK60_RS01445 PF13533 Biotin-lipoyl like HKK60_RS01450 PF00005 ABC transporter HKK60_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS01460 PF07730 Histidine kinase HKK60_RS01465 PF00072 Response regulator receiver domain HKK60_RS01465 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS01480 PF02789 Cytosol aminopeptidase family, N-terminal domain HKK60_RS01480 PF00883 Cytosol aminopeptidase family, catalytic domain HKK60_RS01495 PF01594 AI-2E family transporter HKK60_RS01515 PF00595 PDZ domain HKK60_RS01530 PF07237 Protein of unknown function (DUF1428) HKK60_RS01535 PF00326 Prolyl oligopeptidase family HKK60_RS01535 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HKK60_RS01545 PF00072 Response regulator receiver domain HKK60_RS01545 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS01560 PF07690 Major Facilitator Superfamily HKK60_RS01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS01565 PF03466 LysR substrate binding domain HKK60_RS01570 PF07308 Protein of unknown function (DUF1456) HKK60_RS01580 PF00106 short chain dehydrogenase HKK60_RS01590 PF03485 Arginyl tRNA synthetase N terminal domain HKK60_RS01590 PF05746 DALR anticodon binding domain HKK60_RS01590 PF00750 tRNA synthetases class I (R) HKK60_RS01595 PF04002 RadC-like JAB domain HKK60_RS01600 PF00072 Response regulator receiver domain HKK60_RS01600 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS01605 PF02441 Flavoprotein HKK60_RS01605 PF04127 DNA / pantothenate metabolism flavoprotein HKK60_RS01610 PF00692 dUTPase HKK60_RS01615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKK60_RS01615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKK60_RS01615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKK60_RS01615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKK60_RS01620 PF00072 Response regulator receiver domain HKK60_RS01620 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS01625 PF13492 GAF domain HKK60_RS01625 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS01625 PF13493 Domain of unknown function (DUF4118) HKK60_RS01625 PF02702 Osmosensitive K+ channel His kinase sensor domain HKK60_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS01630 PF02669 K+-transporting ATPase, c chain HKK60_RS01640 PF03814 Potassium-transporting ATPase A subunit HKK60_RS01655 PF00156 Phosphoribosyl transferase domain HKK60_RS01660 PF03372 Endonuclease/Exonuclease/phosphatase family HKK60_RS01665 PF07690 Major Facilitator Superfamily HKK60_RS01675 PF03702 Anhydro-N-acetylmuramic acid kinase HKK60_RS01680 PF04225 Opacity-associated protein A LysM-like domain HKK60_RS01680 PF01551 Peptidase family M23 HKK60_RS01685 PF00579 tRNA synthetases class I (W and Y) HKK60_RS01715 PF04389 Peptidase family M28 HKK60_RS01725 PF01551 Peptidase family M23 HKK60_RS01730 PF13180 PDZ domain HKK60_RS01730 PF03572 Peptidase family S41 HKK60_RS01740 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HKK60_RS01745 PF04973 Nicotinamide mononucleotide transporter HKK60_RS01755 PF00171 Aldehyde dehydrogenase family HKK60_RS01755 PF01619 Proline dehydrogenase HKK60_RS01755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HKK60_RS01755 PF14850 DNA-binding domain of Proline dehydrogenase HKK60_RS01765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKK60_RS01765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HKK60_RS01770 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK60_RS01780 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 HKK60_RS01785 PF00510 Cytochrome c oxidase subunit III HKK60_RS01810 PF01040 UbiA prenyltransferase family HKK60_RS01820 PF13593 SBF-like CPA transporter family (DUF4137) HKK60_RS01830 PF08275 DNA primase catalytic core, N-terminal domain HKK60_RS01830 PF08278 DNA primase DnaG DnaB-binding HKK60_RS01830 PF01807 CHC2 zinc finger HKK60_RS01830 PF10410 DnaB-helicase binding domain of primase HKK60_RS01835 PF03631 Virulence factor BrkB HKK60_RS01845 PF01165 Ribosomal protein S21 HKK60_RS01850 PF00814 Glycoprotease family HKK60_RS01860 PF02152 Dihydroneopterin aldolase HKK60_RS01865 PF00924 Mechanosensitive ion channel HKK60_RS01870 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKK60_RS01870 PF14310 Fibronectin type III-like domain HKK60_RS01870 PF00933 Glycosyl hydrolase family 3 N terminal domain HKK60_RS01880 PF07995 Glucose / Sorbosone dehydrogenase HKK60_RS01885 PF05360 yiaA/B two helix domain HKK60_RS01895 PF13520 Amino acid permease HKK60_RS01905 PF01380 SIS domain HKK60_RS01905 PF01418 Helix-turn-helix domain, rpiR family HKK60_RS01910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKK60_RS01910 PF13378 Enolase C-terminal domain-like HKK60_RS01925 PF00593 TonB dependent receptor HKK60_RS01930 PF00144 Beta-lactamase HKK60_RS01935 PF01427 D-ala-D-ala dipeptidase HKK60_RS01960 PF07063 Domain of unknown function (DUF1338) HKK60_RS01965 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HKK60_RS01965 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HKK60_RS01970 PF08335 GlnD PII-uridylyltransferase HKK60_RS01970 PF03710 Glutamate-ammonia ligase adenylyltransferase HKK60_RS01975 PF02592 Putative vitamin uptake transporter HKK60_RS02005 PF00881 Nitroreductase family HKK60_RS02010 PF04264 YceI-like domain HKK60_RS02025 PF04954 Siderophore-interacting protein HKK60_RS02025 PF08021 Siderophore-interacting FAD-binding domain HKK60_RS02030 PF03551 Transcriptional regulator PadR-like family HKK60_RS02035 PF17831 Pyruvate dehydrogenase E1 component middle domain HKK60_RS02035 PF00456 Transketolase, thiamine diphosphate binding domain HKK60_RS02115 PF00561 alpha/beta hydrolase fold HKK60_RS02165 PF16916 Dimerisation domain of Zinc Transporter HKK60_RS02165 PF01545 Cation efflux family HKK60_RS02170 PF02583 Metal-sensitive transcriptional repressor HKK60_RS02180 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK60_RS02180 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKK60_RS02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS02190 PF03466 LysR substrate binding domain HKK60_RS02195 PF00144 Beta-lactamase HKK60_RS02200 PF07690 Major Facilitator Superfamily HKK60_RS02205 PF12792 CSS motif domain associated with EAL HKK60_RS02205 PF00563 EAL domain HKK60_RS02210 PF00324 Amino acid permease HKK60_RS02215 PF01464 Transglycosylase SLT domain HKK60_RS02240 PF06983 3-demethylubiquinone-9 3-methyltransferase HKK60_RS02250 PF07237 Protein of unknown function (DUF1428) HKK60_RS02255 PF04542 Sigma-70 region 2 HKK60_RS02255 PF08281 Sigma-70, region 4 HKK60_RS02285 PF07694 5TMR of 5TMR-LYT HKK60_RS02285 PF06580 Histidine kinase HKK60_RS02290 PF00072 Response regulator receiver domain HKK60_RS02290 PF04397 LytTr DNA-binding domain HKK60_RS02310 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS02320 PF07690 Major Facilitator Superfamily HKK60_RS02325 PF01431 Peptidase family M13 HKK60_RS02325 PF05649 Peptidase family M13 HKK60_RS02330 PF08448 PAS fold HKK60_RS02330 PF08447 PAS fold HKK60_RS02330 PF00563 EAL domain HKK60_RS02330 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS02335 PF03466 LysR substrate binding domain HKK60_RS02345 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HKK60_RS02350 PF00999 Sodium/hydrogen exchanger family HKK60_RS02375 PF00691 OmpA family HKK60_RS02375 PF13677 Membrane MotB of proton-channel complex MotA/MotB HKK60_RS02380 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS02385 PF01641 SelR domain HKK60_RS02400 PF01037 Lrp/AsnC ligand binding domain HKK60_RS02405 PF01266 FAD dependent oxidoreductase HKK60_RS02410 PF00842 Alanine racemase, C-terminal domain HKK60_RS02410 PF01168 Alanine racemase, N-terminal domain HKK60_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS02420 PF18698 Histidine kinase sensor domain HKK60_RS02420 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS02420 PF00989 PAS fold HKK60_RS02420 PF00672 HAMP domain HKK60_RS02435 PF05175 Methyltransferase small domain HKK60_RS02435 PF08468 Methyltransferase small domain N-terminal HKK60_RS02440 PF01479 S4 domain HKK60_RS02440 PF00849 RNA pseudouridylate synthase HKK60_RS02445 PF13419 Haloacid dehalogenase-like hydrolase HKK60_RS02450 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK60_RS02450 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK60_RS02455 PF07977 FabA-like domain HKK60_RS02460 PF11799 impB/mucB/samB family C-terminal domain HKK60_RS02460 PF11798 IMS family HHH motif HKK60_RS02460 PF00817 impB/mucB/samB family HKK60_RS02475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS02475 PF03466 LysR substrate binding domain HKK60_RS02480 PF08241 Methyltransferase domain HKK60_RS02485 PF13419 Haloacid dehalogenase-like hydrolase HKK60_RS02490 PF00593 TonB dependent receptor HKK60_RS02490 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS02505 PF13185 GAF domain HKK60_RS02515 PF00155 Aminotransferase class I and II HKK60_RS02515 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS02520 PF01625 Peptide methionine sulfoxide reductase HKK60_RS02525 PF17991 Thioredoxin like C-terminal domain HKK60_RS02525 PF02683 Cytochrome C biogenesis protein transmembrane region HKK60_RS02525 PF00578 AhpC/TSA family HKK60_RS02530 PF01641 SelR domain HKK60_RS02535 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS02535 PF00072 Response regulator receiver domain HKK60_RS02540 PF07689 KaiB domain HKK60_RS02540 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS02545 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS02545 PF00672 HAMP domain HKK60_RS02550 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS02550 PF00072 Response regulator receiver domain HKK60_RS02555 PF13537 Glutamine amidotransferase domain HKK60_RS02555 PF00733 Asparagine synthase HKK60_RS02565 PF01242 6-pyruvoyl tetrahydropterin synthase HKK60_RS02580 PF00271 Helicase conserved C-terminal domain HKK60_RS02580 PF00270 DEAD/DEAH box helicase HKK60_RS02590 PF02798 Glutathione S-transferase, N-terminal domain HKK60_RS02590 PF14497 Glutathione S-transferase, C-terminal domain HKK60_RS02595 PF03167 Uracil DNA glycosylase superfamily HKK60_RS02605 PF00437 Type II/IV secretion system protein HKK60_RS02625 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS02625 PF00571 CBS domain HKK60_RS02630 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK60_RS02640 PF01061 ABC-2 type transporter HKK60_RS02645 PF00005 ABC transporter HKK60_RS02680 PF16363 GDP-mannose 4,6 dehydratase HKK60_RS02685 PF16363 GDP-mannose 4,6 dehydratase HKK60_RS02710 PF00535 Glycosyl transferase family 2 HKK60_RS02715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HKK60_RS02720 PF01050 Mannose-6-phosphate isomerase HKK60_RS02720 PF00483 Nucleotidyl transferase HKK60_RS02725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKK60_RS02725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKK60_RS02725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKK60_RS02725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKK60_RS02730 PF00766 Electron transfer flavoprotein FAD-binding domain HKK60_RS02730 PF01012 Electron transfer flavoprotein domain HKK60_RS02735 PF01012 Electron transfer flavoprotein domain HKK60_RS02740 PF16363 GDP-mannose 4,6 dehydratase HKK60_RS02745 PF00483 Nucleotidyl transferase HKK60_RS02750 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HKK60_RS02755 PF04321 RmlD substrate binding domain HKK60_RS02765 PF01144 Coenzyme A transferase HKK60_RS02770 PF01144 Coenzyme A transferase HKK60_RS02790 PF00005 ABC transporter HKK60_RS02795 PF02405 Permease MlaE HKK60_RS02805 PF00816 H-NS histone family HKK60_RS02810 PF04073 Aminoacyl-tRNA editing domain HKK60_RS02810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKK60_RS02810 PF03129 Anticodon binding domain HKK60_RS02820 PF01066 CDP-alcohol phosphatidyltransferase HKK60_RS02830 PF00583 Acetyltransferase (GNAT) family HKK60_RS02840 PF08264 Anticodon-binding domain of tRNA HKK60_RS02840 PF10458 Valyl tRNA synthetase tRNA binding arm HKK60_RS02840 PF00133 tRNA synthetases class I (I, L, M and V) HKK60_RS02850 PF02789 Cytosol aminopeptidase family, N-terminal domain HKK60_RS02850 PF00883 Cytosol aminopeptidase family, catalytic domain HKK60_RS02860 PF03739 Lipopolysaccharide export system permease LptF/LptG HKK60_RS02870 PF00589 Phage integrase family HKK60_RS02870 PF02899 Phage integrase, N-terminal SAM-like domain HKK60_RS02875 PF13098 Thioredoxin-like domain HKK60_RS02875 PF10411 Disulfide bond isomerase protein N-terminus HKK60_RS02880 PF00553 Cellulose binding domain HKK60_RS02880 PF00041 Fibronectin type III domain HKK60_RS02880 PF00704 Glycosyl hydrolases family 18 HKK60_RS02885 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HKK60_RS02885 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HKK60_RS02885 PF02769 AIR synthase related protein, C-terminal domain HKK60_RS02890 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS02890 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK60_RS02890 PF05658 Head domain of trimeric autotransporter adhesin HKK60_RS02890 PF03895 YadA-like membrane anchor domain HKK60_RS02895 PF00082 Subtilase family HKK60_RS02895 PF04151 Bacterial pre-peptidase C-terminal domain HKK60_RS02900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKK60_RS02900 PF00437 Type II/IV secretion system protein HKK60_RS02905 PF00482 Type II secretion system (T2SS), protein F HKK60_RS02910 PF08334 Type II secretion system (T2SS), protein G HKK60_RS02915 PF12019 Type II transport protein GspH HKK60_RS02920 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS02930 PF03934 Type II secretion system (T2SS), protein K HKK60_RS02935 PF05137 Fimbrial assembly protein (PilN) HKK60_RS02940 PF10741 Type II secretion system (T2SS), protein M subtype b HKK60_RS02950 PF00263 Bacterial type II and III secretion system protein HKK60_RS02950 PF03958 Bacterial type II/III secretion system short domain HKK60_RS02965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKK60_RS02965 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HKK60_RS02975 PF16970 Type-1 fimbrial protein, A HKK60_RS02980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK60_RS02980 PF02753 Pili assembly chaperone PapD, C-terminal domain HKK60_RS02985 PF13954 PapC N-terminal domain HKK60_RS02985 PF00577 Outer membrane usher protein HKK60_RS02985 PF13953 PapC C-terminal domain HKK60_RS02995 PF02350 UDP-N-acetylglucosamine 2-epimerase HKK60_RS03005 PF13632 Glycosyl transferase family group 2 HKK60_RS03005 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKK60_RS03020 PF00860 Permease family HKK60_RS03030 PF00005 ABC transporter HKK60_RS03030 PF12848 ABC transporter HKK60_RS03040 PF00464 Serine hydroxymethyltransferase HKK60_RS03060 PF03477 ATP cone domain HKK60_RS03065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKK60_RS03065 PF01872 RibD C-terminal domain HKK60_RS03110 PF00677 Lumazine binding domain HKK60_RS03115 PF00925 GTP cyclohydrolase II HKK60_RS03115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HKK60_RS03120 PF00885 6,7-dimethyl-8-ribityllumazine synthase HKK60_RS03125 PF01029 NusB family HKK60_RS03130 PF02769 AIR synthase related protein, C-terminal domain HKK60_RS03130 PF00586 AIR synthase related protein, N-terminal domain HKK60_RS03140 PF02753 Pili assembly chaperone PapD, C-terminal domain HKK60_RS03140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK60_RS03150 PF13953 PapC C-terminal domain HKK60_RS03150 PF13954 PapC N-terminal domain HKK60_RS03150 PF00577 Outer membrane usher protein HKK60_RS03180 PF03797 Autotransporter beta-domain HKK60_RS03185 PF01757 Acyltransferase family HKK60_RS03195 PF04307 LexA-binding, inner membrane-associated putative hydrolase HKK60_RS03200 PF02021 Uncharacterised protein family UPF0102 HKK60_RS03210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK60_RS03230 PF02381 MraZ protein, putative antitoxin-like HKK60_RS03235 PF01795 MraW methylase family HKK60_RS03240 PF04999 Cell division protein FtsL HKK60_RS03245 PF00905 Penicillin binding protein transpeptidase domain HKK60_RS03245 PF03717 Penicillin-binding Protein dimerisation domain HKK60_RS03250 PF08245 Mur ligase middle domain HKK60_RS03250 PF02875 Mur ligase family, glutamate ligase domain HKK60_RS03250 PF01225 Mur ligase family, catalytic domain HKK60_RS03255 PF01225 Mur ligase family, catalytic domain HKK60_RS03255 PF02875 Mur ligase family, glutamate ligase domain HKK60_RS03255 PF08245 Mur ligase middle domain HKK60_RS03260 PF00953 Glycosyl transferase family 4 HKK60_RS03265 PF01098 Cell cycle protein HKK60_RS03270 PF03033 Glycosyltransferase family 28 N-terminal domain HKK60_RS03270 PF04101 Glycosyltransferase family 28 C-terminal domain HKK60_RS03275 PF08245 Mur ligase middle domain HKK60_RS03275 PF01225 Mur ligase family, catalytic domain HKK60_RS03275 PF02875 Mur ligase family, glutamate ligase domain HKK60_RS03280 PF07478 D-ala D-ala ligase C-terminus HKK60_RS03280 PF01820 D-ala D-ala ligase N-terminus HKK60_RS03285 PF08478 POTRA domain, FtsQ-type HKK60_RS03285 PF03799 Cell division protein FtsQ HKK60_RS03290 PF02491 SHS2 domain inserted in FTSA HKK60_RS03295 PF12327 FtsZ family, C-terminal domain HKK60_RS03295 PF00091 Tubulin/FtsZ family, GTPase domain HKK60_RS03300 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HKK60_RS03310 PF01551 Peptidase family M23 HKK60_RS03310 PF08525 Opacity-associated protein A N-terminal motif HKK60_RS03310 PF01476 LysM domain HKK60_RS03315 PF07517 SecA DEAD-like domain HKK60_RS03315 PF02810 SEC-C motif HKK60_RS03315 PF07516 SecA Wing and Scaffold domain HKK60_RS03315 PF01043 SecA preprotein cross-linking domain HKK60_RS03320 PF00293 NUDIX domain HKK60_RS03330 PF02219 Methylenetetrahydrofolate reductase HKK60_RS03335 PF00561 alpha/beta hydrolase fold HKK60_RS03340 PF07694 5TMR of 5TMR-LYT HKK60_RS03340 PF13492 GAF domain HKK60_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS03340 PF06580 Histidine kinase HKK60_RS03345 PF04397 LytTr DNA-binding domain HKK60_RS03345 PF00072 Response regulator receiver domain HKK60_RS03350 PF01979 Amidohydrolase family HKK60_RS03365 PF04073 Aminoacyl-tRNA editing domain HKK60_RS03370 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HKK60_RS03370 PF05221 S-adenosyl-L-homocysteine hydrolase HKK60_RS03380 PF00311 Phosphoenolpyruvate carboxylase HKK60_RS03385 PF03061 Thioesterase superfamily HKK60_RS03390 PF02773 S-adenosylmethionine synthetase, C-terminal domain HKK60_RS03390 PF00438 S-adenosylmethionine synthetase, N-terminal domain HKK60_RS03390 PF02772 S-adenosylmethionine synthetase, central domain HKK60_RS03410 PF13847 Methyltransferase domain HKK60_RS03415 PF01207 Dihydrouridine synthase (Dus) HKK60_RS03425 PF03466 LysR substrate binding domain HKK60_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS03430 PF07690 Major Facilitator Superfamily HKK60_RS03435 PF00294 pfkB family carbohydrate kinase HKK60_RS03440 PF01773 Na+ dependent nucleoside transporter N-terminus HKK60_RS03440 PF07662 Na+ dependent nucleoside transporter C-terminus HKK60_RS03440 PF07670 Nucleoside recognition HKK60_RS03445 PF00248 Aldo/keto reductase family HKK60_RS03455 PF00593 TonB dependent receptor HKK60_RS03455 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS03475 PF00005 ABC transporter HKK60_RS03480 PF13472 GDSL-like Lipase/Acylhydrolase family HKK60_RS03485 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS03485 PF00072 Response regulator receiver domain HKK60_RS03490 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS03490 PF08521 Two-component sensor kinase N-terminal HKK60_RS03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS03500 PF01219 Prokaryotic diacylglycerol kinase HKK60_RS03505 PF03741 Integral membrane protein TerC family HKK60_RS03510 PF07690 Major Facilitator Superfamily HKK60_RS03515 PF04011 LemA family HKK60_RS03530 PF01790 Prolipoprotein diacylglyceryl transferase HKK60_RS03535 PF00303 Thymidylate synthase HKK60_RS03540 PF00186 Dihydrofolate reductase HKK60_RS03545 PF06940 Domain of unknown function (DUF1287) HKK60_RS03550 PF00149 Calcineurin-like phosphoesterase HKK60_RS03555 PF04379 ApaG domain HKK60_RS03560 PF00398 Ribosomal RNA adenine dimethylase HKK60_RS03565 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HKK60_RS03570 PF00639 PPIC-type PPIASE domain HKK60_RS03570 PF09312 SurA N-terminal domain HKK60_RS03575 PF03968 OstA-like protein HKK60_RS03575 PF04453 LPS transport system D HKK60_RS03580 PF00850 Histone deacetylase domain HKK60_RS03585 PF01923 Cobalamin adenosyltransferase HKK60_RS03595 PF01494 FAD binding domain HKK60_RS03600 PF01494 FAD binding domain HKK60_RS03605 PF00923 Transaldolase/Fructose-6-phosphate aldolase HKK60_RS03605 PF13202 EF hand HKK60_RS03610 PF01728 FtsJ-like methyltransferase HKK60_RS03610 PF18125 RlmM ferredoxin-like domain HKK60_RS03630 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HKK60_RS03630 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKK60_RS03640 PF01625 Peptide methionine sulfoxide reductase HKK60_RS03645 PF00923 Transaldolase/Fructose-6-phosphate aldolase HKK60_RS03650 PF14760 Rnk N-terminus HKK60_RS03650 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK60_RS03655 PF03466 LysR substrate binding domain HKK60_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS03660 PF13192 Thioredoxin domain HKK60_RS03660 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS03665 PF00578 AhpC/TSA family HKK60_RS03665 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKK60_RS03670 PF05175 Methyltransferase small domain HKK60_RS03670 PF17827 PrmC N-terminal domain HKK60_RS03675 PF00561 alpha/beta hydrolase fold HKK60_RS03680 PF03466 LysR substrate binding domain HKK60_RS03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS03685 PF07690 Major Facilitator Superfamily HKK60_RS03695 PF00293 NUDIX domain HKK60_RS03700 PF01367 5'-3' exonuclease, C-terminal SAM fold HKK60_RS03700 PF01612 3'-5' exonuclease HKK60_RS03700 PF00476 DNA polymerase family A HKK60_RS03700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HKK60_RS03715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HKK60_RS03715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HKK60_RS03715 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HKK60_RS03735 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HKK60_RS03740 PF02233 NAD(P) transhydrogenase beta subunit HKK60_RS03750 PF01883 Iron-sulfur cluster assembly protein HKK60_RS03755 PF01063 Amino-transferase class IV HKK60_RS03760 PF04151 Bacterial pre-peptidase C-terminal domain HKK60_RS03760 PF00082 Subtilase family HKK60_RS03775 PF03358 NADPH-dependent FMN reductase HKK60_RS03780 PF03631 Virulence factor BrkB HKK60_RS03785 PF00578 AhpC/TSA family HKK60_RS03790 PF03976 Polyphosphate kinase 2 (PPK2) HKK60_RS03800 PF03462 PCRF domain HKK60_RS03800 PF00472 RF-1 domain HKK60_RS03805 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HKK60_RS03805 PF01488 Shikimate / quinate 5-dehydrogenase HKK60_RS03805 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HKK60_RS03815 PF03550 Outer membrane lipoprotein LolB HKK60_RS03820 PF00288 GHMP kinases N terminal domain HKK60_RS03820 PF08544 GHMP kinases C terminal HKK60_RS03830 PF14572 Phosphoribosyl synthetase-associated domain HKK60_RS03830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HKK60_RS03835 PF14693 Ribosomal protein TL5, C-terminal domain HKK60_RS03835 PF01386 Ribosomal L25p family HKK60_RS03840 PF01195 Peptidyl-tRNA hydrolase HKK60_RS03845 PF06071 Protein of unknown function (DUF933) HKK60_RS03845 PF01926 50S ribosome-binding GTPase HKK60_RS03850 PF00593 TonB dependent receptor HKK60_RS03850 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS03855 PF03575 Peptidase family S51 HKK60_RS03860 PF01112 Asparaginase HKK60_RS03880 PF03144 Elongation factor Tu domain 2 HKK60_RS03880 PF03143 Elongation factor Tu C-terminal domain HKK60_RS03880 PF00009 Elongation factor Tu GTP binding domain HKK60_RS03890 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HKK60_RS03895 PF02357 Transcription termination factor nusG HKK60_RS03895 PF00467 KOW motif HKK60_RS03900 PF00298 Ribosomal protein L11, RNA binding domain HKK60_RS03900 PF03946 Ribosomal protein L11, N-terminal domain HKK60_RS03905 PF00687 Ribosomal protein L1p/L10e family HKK60_RS03910 PF00466 Ribosomal protein L10 HKK60_RS03915 PF00542 Ribosomal protein L7/L12 C-terminal domain HKK60_RS03915 PF16320 Ribosomal protein L7/L12 dimerisation domain HKK60_RS03920 PF04561 RNA polymerase Rpb2, domain 2 HKK60_RS03920 PF04565 RNA polymerase Rpb2, domain 3 HKK60_RS03920 PF10385 RNA polymerase beta subunit external 1 domain HKK60_RS03920 PF04563 RNA polymerase beta subunit HKK60_RS03920 PF00562 RNA polymerase Rpb2, domain 6 HKK60_RS03920 PF04560 RNA polymerase Rpb2, domain 7 HKK60_RS03925 PF04998 RNA polymerase Rpb1, domain 5 HKK60_RS03925 PF05000 RNA polymerase Rpb1, domain 4 HKK60_RS03925 PF04983 RNA polymerase Rpb1, domain 3 HKK60_RS03925 PF00623 RNA polymerase Rpb1, domain 2 HKK60_RS03925 PF04997 RNA polymerase Rpb1, domain 1 HKK60_RS03930 PF00164 Ribosomal protein S12/S23 HKK60_RS03935 PF00177 Ribosomal protein S7p/S5e HKK60_RS03940 PF00009 Elongation factor Tu GTP binding domain HKK60_RS03940 PF03764 Elongation factor G, domain IV HKK60_RS03940 PF00679 Elongation factor G C-terminus HKK60_RS03940 PF14492 Elongation Factor G, domain II HKK60_RS03940 PF03144 Elongation factor Tu domain 2 HKK60_RS03945 PF03144 Elongation factor Tu domain 2 HKK60_RS03945 PF03143 Elongation factor Tu C-terminal domain HKK60_RS03945 PF00009 Elongation factor Tu GTP binding domain HKK60_RS03950 PF00338 Ribosomal protein S10p/S20e HKK60_RS03955 PF00297 Ribosomal protein L3 HKK60_RS03960 PF00573 Ribosomal protein L4/L1 family HKK60_RS03965 PF00276 Ribosomal protein L23 HKK60_RS03970 PF03947 Ribosomal Proteins L2, C-terminal domain HKK60_RS03970 PF00181 Ribosomal Proteins L2, RNA binding domain HKK60_RS03975 PF00203 Ribosomal protein S19 HKK60_RS03980 PF00237 Ribosomal protein L22p/L17e HKK60_RS03985 PF00189 Ribosomal protein S3, C-terminal domain HKK60_RS03985 PF07650 KH domain HKK60_RS03990 PF00252 Ribosomal protein L16p/L10e HKK60_RS03995 PF00831 Ribosomal L29 protein HKK60_RS04000 PF00366 Ribosomal protein S17 HKK60_RS04005 PF00238 Ribosomal protein L14p/L23e HKK60_RS04010 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HKK60_RS04010 PF00467 KOW motif HKK60_RS04015 PF00281 Ribosomal protein L5 HKK60_RS04015 PF00673 ribosomal L5P family C-terminus HKK60_RS04020 PF00253 Ribosomal protein S14p/S29e HKK60_RS04025 PF00410 Ribosomal protein S8 HKK60_RS04030 PF00347 Ribosomal protein L6 HKK60_RS04035 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HKK60_RS04040 PF03719 Ribosomal protein S5, C-terminal domain HKK60_RS04040 PF00333 Ribosomal protein S5, N-terminal domain HKK60_RS04045 PF00327 Ribosomal protein L30p/L7e HKK60_RS04050 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HKK60_RS04055 PF00344 SecY translocase HKK60_RS04060 PF00416 Ribosomal protein S13/S18 HKK60_RS04065 PF00411 Ribosomal protein S11 HKK60_RS04070 PF00163 Ribosomal protein S4/S9 N-terminal domain HKK60_RS04070 PF01479 S4 domain HKK60_RS04075 PF01000 RNA polymerase Rpb3/RpoA insert domain HKK60_RS04075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HKK60_RS04075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HKK60_RS04080 PF01196 Ribosomal protein L17 HKK60_RS04085 PF02600 Disulfide bond formation protein DsbB HKK60_RS04095 PF01474 Class-II DAHP synthetase family HKK60_RS04105 PF01425 Amidase HKK60_RS04120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKK60_RS04125 PF00056 lactate/malate dehydrogenase, NAD binding domain HKK60_RS04125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HKK60_RS04130 PF00849 RNA pseudouridylate synthase HKK60_RS04135 PF13193 AMP-binding enzyme C-terminal domain HKK60_RS04135 PF16177 Acetyl-coenzyme A synthetase N-terminus HKK60_RS04135 PF00501 AMP-binding enzyme HKK60_RS04150 PF02798 Glutathione S-transferase, N-terminal domain HKK60_RS04150 PF00043 Glutathione S-transferase, C-terminal domain HKK60_RS04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS04160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK60_RS04170 PF02028 BCCT, betaine/carnitine/choline family transporter HKK60_RS04175 PF01964 Radical SAM ThiC family HKK60_RS04175 PF13667 ThiC-associated domain HKK60_RS04185 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS04185 PF00072 Response regulator receiver domain HKK60_RS04190 PF12833 Helix-turn-helix domain HKK60_RS04190 PF01965 DJ-1/PfpI family HKK60_RS04195 PF00593 TonB dependent receptor HKK60_RS04195 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS04210 PF00719 Inorganic pyrophosphatase HKK60_RS04230 PF00593 TonB dependent receptor HKK60_RS04230 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS04240 PF01126 Heme oxygenase HKK60_RS04245 PF04304 Protein of unknown function (DUF454) HKK60_RS04250 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS04255 PF02472 Biopolymer transport protein ExbD/TolR HKK60_RS04265 PF03030 Inorganic H+ pyrophosphatase HKK60_RS04280 PF00365 Phosphofructokinase HKK60_RS04290 PF08245 Mur ligase middle domain HKK60_RS04290 PF02875 Mur ligase family, glutamate ligase domain HKK60_RS04290 PF01225 Mur ligase family, catalytic domain HKK60_RS04300 PF01569 PAP2 superfamily HKK60_RS04325 PF12889 Protein of unknown function (DUF3829) HKK60_RS04330 PF00027 Cyclic nucleotide-binding domain HKK60_RS04330 PF00520 Ion transport protein HKK60_RS04335 PF00202 Aminotransferase class-III HKK60_RS04345 PF00127 Copper binding proteins, plastocyanin/azurin family HKK60_RS04350 PF00202 Aminotransferase class-III HKK60_RS04355 PF02581 Thiamine monophosphate synthase HKK60_RS04360 PF00301 Rubredoxin HKK60_RS04365 PF13369 Transglutaminase-like superfamily HKK60_RS04375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HKK60_RS04385 PF01812 5-formyltetrahydrofolate cyclo-ligase family HKK60_RS04395 PF05164 Cell division protein ZapA HKK60_RS04405 PF03695 Uncharacterised protein family (UPF0149) HKK60_RS04410 PF00557 Metallopeptidase family M24 HKK60_RS04410 PF05195 Aminopeptidase P, N-terminal domain HKK60_RS04415 PF00557 Metallopeptidase family M24 HKK60_RS04430 PF04055 Radical SAM superfamily HKK60_RS04430 PF06969 HemN C-terminal domain HKK60_RS04435 PF01725 Ham1 family HKK60_RS04440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK60_RS04445 PF03725 3' exoribonuclease family, domain 2 HKK60_RS04445 PF01138 3' exoribonuclease family, domain 1 HKK60_RS04450 PF08340 Domain of unknown function (DUF1732) HKK60_RS04450 PF03755 YicC-like family, N-terminal region HKK60_RS04455 PF02769 AIR synthase related protein, C-terminal domain HKK60_RS04455 PF00586 AIR synthase related protein, N-terminal domain HKK60_RS04465 PF03144 Elongation factor Tu domain 2 HKK60_RS04465 PF00009 Elongation factor Tu GTP binding domain HKK60_RS04465 PF09106 Elongation factor SelB, winged helix HKK60_RS04465 PF09107 Elongation factor SelB, winged helix HKK60_RS04470 PF12390 Selenocysteine synthase N terminal HKK60_RS04470 PF03841 L-seryl-tRNA selenium transferase HKK60_RS04475 PF04216 Protein involved in formate dehydrogenase formation HKK60_RS04485 PF01292 Prokaryotic cytochrome b561 HKK60_RS04490 PF12800 4Fe-4S binding domain HKK60_RS04490 PF09163 Formate dehydrogenase N, transmembrane HKK60_RS04490 PF13247 4Fe-4S dicluster domain HKK60_RS04500 PF00625 Guanylate kinase HKK60_RS04505 PF01192 RNA polymerase Rpb6 HKK60_RS04510 PF04607 Region found in RelA / SpoT proteins HKK60_RS04510 PF02824 TGS domain HKK60_RS04510 PF13291 ACT domain HKK60_RS04515 PF01042 Endoribonuclease L-PSP HKK60_RS04520 PF17191 RecG wedge domain HKK60_RS04520 PF00271 Helicase conserved C-terminal domain HKK60_RS04520 PF00270 DEAD/DEAH box helicase HKK60_RS04525 PF01156 Inosine-uridine preferring nucleoside hydrolase HKK60_RS04530 PF01197 Ribosomal protein L31 HKK60_RS04535 PF00285 Citrate synthase, C-terminal domain HKK60_RS04550 PF17271 TcfC Usher-like barrel domain HKK60_RS04550 PF15976 CS1-pili formation C-terminal HKK60_RS04550 PF16967 E-set like domain HKK60_RS04565 PF05658 Head domain of trimeric autotransporter adhesin HKK60_RS04565 PF03895 YadA-like membrane anchor domain HKK60_RS04565 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS04565 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK60_RS04580 PF00905 Penicillin binding protein transpeptidase domain HKK60_RS04580 PF17092 Penicillin-binding protein OB-like domain HKK60_RS04580 PF00912 Transglycosylase HKK60_RS04605 PF07660 Secretin and TonB N terminus short domain HKK60_RS04605 PF11741 AMIN domain HKK60_RS04605 PF00263 Bacterial type II and III secretion system protein HKK60_RS04605 PF03958 Bacterial type II/III secretion system short domain HKK60_RS04610 PF17863 AAA lid domain HKK60_RS04610 PF07726 ATPase family associated with various cellular activities (AAA) HKK60_RS04630 PF07584 Aerotolerance regulator N-terminal HKK60_RS04630 PF13519 von Willebrand factor type A domain HKK60_RS04640 PF00375 Sodium:dicarboxylate symporter family HKK60_RS04645 PF02780 Transketolase, C-terminal domain HKK60_RS04645 PF00456 Transketolase, thiamine diphosphate binding domain HKK60_RS04645 PF02779 Transketolase, pyrimidine binding domain HKK60_RS04660 PF03965 Penicillinase repressor HKK60_RS04675 PF00753 Metallo-beta-lactamase superfamily HKK60_RS04685 PF03922 OmpW family HKK60_RS04690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKK60_RS04690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKK60_RS04705 PF00162 Phosphoglycerate kinase HKK60_RS04710 PF13419 Haloacid dehalogenase-like hydrolase HKK60_RS04715 PF00224 Pyruvate kinase, barrel domain HKK60_RS04715 PF02887 Pyruvate kinase, alpha/beta domain HKK60_RS04720 PF00274 Fructose-bisphosphate aldolase class-I HKK60_RS04730 PF01661 Macro domain HKK60_RS04735 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS04740 PF03466 LysR substrate binding domain HKK60_RS04755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS04755 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS04760 PF00873 AcrB/AcrD/AcrF family HKK60_RS04770 PF01235 Sodium:alanine symporter family HKK60_RS04775 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKK60_RS04775 PF00588 SpoU rRNA Methylase family HKK60_RS04785 PF01741 Large-conductance mechanosensitive channel, MscL HKK60_RS04790 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK60_RS04805 PF03600 Citrate transporter HKK60_RS04805 PF02080 TrkA-C domain HKK60_RS04810 PF02390 Putative methyltransferase HKK60_RS04815 PF05690 Thiazole biosynthesis protein ThiG HKK60_RS04825 PF03797 Autotransporter beta-domain HKK60_RS04825 PF00657 GDSL-like Lipase/Acylhydrolase HKK60_RS04850 PF18030 RimK PreATP-grasp domain HKK60_RS04850 PF08443 RimK-like ATP-grasp domain HKK60_RS04865 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS04865 PF00072 Response regulator receiver domain HKK60_RS04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS04870 PF00989 PAS fold HKK60_RS04870 PF11808 Phosphate regulon sensor protein PhoR HKK60_RS04870 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS04880 PF01121 Dephospho-CoA kinase HKK60_RS04885 PF06750 Bacterial Peptidase A24 N-terminal domain HKK60_RS04885 PF01478 Type IV leader peptidase family HKK60_RS04890 PF00482 Type II secretion system (T2SS), protein F HKK60_RS04900 PF00114 Pilin (bacterial filament) HKK60_RS04900 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS04905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKK60_RS04905 PF00437 Type II/IV secretion system protein HKK60_RS04910 PF00158 Sigma-54 interaction domain HKK60_RS04910 PF00072 Response regulator receiver domain HKK60_RS04910 PF02954 Bacterial regulatory protein, Fis family HKK60_RS04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS04915 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS04920 PF08442 ATP-grasp domain HKK60_RS04920 PF00549 CoA-ligase HKK60_RS04925 PF02629 CoA binding domain HKK60_RS04925 PF00549 CoA-ligase HKK60_RS04930 PF02540 NAD synthase HKK60_RS04930 PF00795 Carbon-nitrogen hydrolase HKK60_RS04940 PF13525 Outer membrane lipoprotein HKK60_RS04945 PF00849 RNA pseudouridylate synthase HKK60_RS04960 PF04134 Protein of unknown function, DUF393 HKK60_RS04965 PF00982 Glycosyltransferase family 20 HKK60_RS04970 PF00723 Glycosyl hydrolases family 15 HKK60_RS04975 PF02358 Trehalose-phosphatase HKK60_RS04980 PF00593 TonB dependent receptor HKK60_RS04980 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS04995 PF00205 Thiamine pyrophosphate enzyme, central domain HKK60_RS04995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK60_RS04995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK60_RS05015 PF10431 C-terminal, D2-small domain, of ClpB protein HKK60_RS05015 PF02861 Clp amino terminal domain, pathogenicity island component HKK60_RS05015 PF07724 AAA domain (Cdc48 subfamily) HKK60_RS05015 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS05015 PF17871 AAA lid domain HKK60_RS05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS05025 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS05025 PF00672 HAMP domain HKK60_RS05025 PF16527 Two-component sensor protein CpxA, periplasmic domain HKK60_RS05030 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS05030 PF00072 Response regulator receiver domain HKK60_RS05035 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK60_RS05040 PF02254 TrkA-N domain HKK60_RS05040 PF00999 Sodium/hydrogen exchanger family HKK60_RS05065 PF00005 ABC transporter HKK60_RS05065 PF12848 ABC transporter HKK60_RS05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS05070 PF03466 LysR substrate binding domain HKK60_RS05095 PF01336 OB-fold nucleic acid binding domain HKK60_RS05095 PF00152 tRNA synthetases class II (D, K and N) HKK60_RS05095 PF02938 GAD domain HKK60_RS05115 PF01709 Transcriptional regulator HKK60_RS05120 PF02075 Crossover junction endodeoxyribonuclease RuvC HKK60_RS05125 PF01330 RuvA N terminal domain HKK60_RS05125 PF07499 RuvA, C-terminal domain HKK60_RS05130 PF02705 K+ potassium transporter HKK60_RS05135 PF17864 RuvB AAA lid domain HKK60_RS05135 PF05491 RuvB C-terminal winged helix domain HKK60_RS05135 PF05496 Holliday junction DNA helicase RuvB P-loop domain HKK60_RS05140 PF03061 Thioesterase superfamily HKK60_RS05145 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS05150 PF02472 Biopolymer transport protein ExbD/TolR HKK60_RS05160 PF07676 WD40-like Beta Propeller Repeat HKK60_RS05160 PF04052 TolB amino-terminal domain HKK60_RS05165 PF00691 OmpA family HKK60_RS05175 PF04055 Radical SAM superfamily HKK60_RS05180 PF06508 Queuosine biosynthesis protein QueC HKK60_RS05460 PF05275 Copper resistance protein B precursor (CopB) HKK60_RS05465 PF00394 Multicopper oxidase HKK60_RS05465 PF07731 Multicopper oxidase HKK60_RS05465 PF07732 Multicopper oxidase HKK60_RS05475 PF16124 RecQ zinc-binding HKK60_RS05475 PF09382 RQC domain HKK60_RS05475 PF00270 DEAD/DEAH box helicase HKK60_RS05475 PF00570 HRDC domain HKK60_RS05475 PF00271 Helicase conserved C-terminal domain HKK60_RS05480 PF00210 Ferritin-like domain HKK60_RS05485 PF04408 Helicase associated domain (HA2) HKK60_RS05485 PF00271 Helicase conserved C-terminal domain HKK60_RS05485 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HKK60_RS05485 PF11898 Domain of unknown function (DUF3418) HKK60_RS05485 PF00270 DEAD/DEAH box helicase HKK60_RS05495 PF02824 TGS domain HKK60_RS05495 PF13291 ACT domain HKK60_RS05495 PF04607 Region found in RelA / SpoT proteins HKK60_RS05510 PF00535 Glycosyl transferase family 2 HKK60_RS05515 PF00905 Penicillin binding protein transpeptidase domain HKK60_RS05515 PF14814 Bifunctional transglycosylase second domain HKK60_RS05515 PF00912 Transglycosylase HKK60_RS05525 PF13307 Helicase C-terminal domain HKK60_RS05525 PF04851 Type III restriction enzyme, res subunit HKK60_RS05530 PF00814 Glycoprotease family HKK60_RS05540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HKK60_RS05540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HKK60_RS05545 PF00072 Response regulator receiver domain HKK60_RS05550 PF00072 Response regulator receiver domain HKK60_RS05555 PF01584 CheW-like domain HKK60_RS05560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS05560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HKK60_RS05565 PF02895 Signal transducing histidine kinase, homodimeric domain HKK60_RS05565 PF01584 CheW-like domain HKK60_RS05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS05565 PF00072 Response regulator receiver domain HKK60_RS05565 PF01627 Hpt domain HKK60_RS05580 PF04452 RNA methyltransferase HKK60_RS05585 PF00202 Aminotransferase class-III HKK60_RS05590 PF00293 NUDIX domain HKK60_RS05595 PF00459 Inositol monophosphatase family HKK60_RS05600 PF03819 MazG nucleotide pyrophosphohydrolase domain HKK60_RS05605 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HKK60_RS05615 PF16200 C-terminal region of band_7 HKK60_RS05615 PF01145 SPFH domain / Band 7 family HKK60_RS05625 PF08669 Glycine cleavage T-protein C-terminal barrel domain HKK60_RS05625 PF01571 Aminomethyltransferase folate-binding domain HKK60_RS05630 PF01597 Glycine cleavage H-protein HKK60_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS05640 PF03466 LysR substrate binding domain HKK60_RS05670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS05670 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS05670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK60_RS05670 PF09317 Domain of unknown function (DUF1974) HKK60_RS05680 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS05685 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS05685 PF00593 TonB dependent receptor HKK60_RS05695 PF01430 Hsp33 protein HKK60_RS05700 PF00912 Transglycosylase HKK60_RS05705 PF00535 Glycosyl transferase family 2 HKK60_RS05720 PF03006 Haemolysin-III related HKK60_RS05725 PF16658 Class II release factor RF3, C-terminal domain HKK60_RS05725 PF00009 Elongation factor Tu GTP binding domain HKK60_RS05730 PF01551 Peptidase family M23 HKK60_RS05730 PF01476 LysM domain HKK60_RS05730 PF08525 Opacity-associated protein A N-terminal motif HKK60_RS05735 PF00561 alpha/beta hydrolase fold HKK60_RS05740 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK60_RS05745 PF00696 Amino acid kinase family HKK60_RS05745 PF03447 Homoserine dehydrogenase, NAD binding domain HKK60_RS05745 PF00742 Homoserine dehydrogenase HKK60_RS05750 PF12697 Alpha/beta hydrolase family HKK60_RS05755 PF03313 Serine dehydratase alpha chain HKK60_RS05755 PF03315 Serine dehydratase beta chain HKK60_RS05770 PF01292 Prokaryotic cytochrome b561 HKK60_RS05780 PF17149 Periplasmic sensor domain found in signal transduction proteins HKK60_RS05780 PF00672 HAMP domain HKK60_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS05780 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS05780 PF01627 Hpt domain HKK60_RS05780 PF00072 Response regulator receiver domain HKK60_RS05785 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS05785 PF18415 Histidine kinase receptor ArcB trans-membrane domain HKK60_RS05785 PF01627 Hpt domain HKK60_RS05785 PF00989 PAS fold HKK60_RS05785 PF00072 Response regulator receiver domain HKK60_RS05785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS05790 PF07690 Major Facilitator Superfamily HKK60_RS05795 PF01208 Uroporphyrinogen decarboxylase (URO-D) HKK60_RS05805 PF01761 3-dehydroquinate synthase HKK60_RS05810 PF01202 Shikimate kinase HKK60_RS05825 PF01243 Pyridoxamine 5'-phosphate oxidase HKK60_RS05825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HKK60_RS05830 PF00583 Acetyltransferase (GNAT) family HKK60_RS05845 PF06506 Propionate catabolism activator HKK60_RS05845 PF02954 Bacterial regulatory protein, Fis family HKK60_RS05845 PF00158 Sigma-54 interaction domain HKK60_RS05855 PF00285 Citrate synthase, C-terminal domain HKK60_RS05860 PF00330 Aconitase family (aconitate hydratase) HKK60_RS05860 PF00694 Aconitase C-terminal domain HKK60_RS05865 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HKK60_RS05875 PF04303 PrpF protein HKK60_RS05880 PF03972 MmgE/PrpD family HKK60_RS05885 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HKK60_RS05885 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HKK60_RS05885 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HKK60_RS05885 PF00207 Alpha-2-macroglobulin family HKK60_RS05885 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HKK60_RS05885 PF07703 Alpha-2-macroglobulin bait region domain HKK60_RS05885 PF01835 MG2 domain HKK60_RS05885 PF17962 Bacterial macroglobulin domain 6 HKK60_RS05890 PF00905 Penicillin binding protein transpeptidase domain HKK60_RS05890 PF06832 Penicillin-Binding Protein C-terminus Family HKK60_RS05890 PF00912 Transglycosylase HKK60_RS05900 PF08534 Redoxin HKK60_RS05905 PF01556 DnaJ C terminal domain HKK60_RS05905 PF00226 DnaJ domain HKK60_RS05910 PF00072 Response regulator receiver domain HKK60_RS05915 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS05915 PF00107 Zinc-binding dehydrogenase HKK60_RS05920 PF12221 Bacterial membrane protein N terminal HKK60_RS05920 PF01145 SPFH domain / Band 7 family HKK60_RS05925 PF01145 SPFH domain / Band 7 family HKK60_RS05935 PF00709 Adenylosuccinate synthetase HKK60_RS05945 PF04225 Opacity-associated protein A LysM-like domain HKK60_RS05945 PF01551 Peptidase family M23 HKK60_RS05950 PF01476 LysM domain HKK60_RS05950 PF03734 L,D-transpeptidase catalytic domain HKK60_RS05955 PF02203 Tar ligand binding domain homologue HKK60_RS05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS05955 PF00672 HAMP domain HKK60_RS05980 PF00199 Catalase HKK60_RS05980 PF06628 Catalase-related immune-responsive HKK60_RS05980 PF18011 C-terminal domain found in long catalases HKK60_RS05985 PF02311 AraC-like ligand binding domain HKK60_RS05985 PF12833 Helix-turn-helix domain HKK60_RS05990 PF00324 Amino acid permease HKK60_RS06000 PF02347 Glycine cleavage system P-protein HKK60_RS06005 PF07690 Major Facilitator Superfamily HKK60_RS06025 PF08019 Phosphoethanolamine transferase EptA/EptB HKK60_RS06025 PF00884 Sulfatase HKK60_RS06040 PF00072 Response regulator receiver domain HKK60_RS06040 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS06045 PF00672 HAMP domain HKK60_RS06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS06045 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS06060 PF04328 Selenoprotein, putative HKK60_RS06065 PF13722 5TM C-terminal transporter carbon starvation CstA HKK60_RS06065 PF02554 Carbon starvation protein CstA HKK60_RS06070 PF05726 Pirin C-terminal cupin domain HKK60_RS06070 PF02678 Pirin HKK60_RS06080 PF00230 Major intrinsic protein HKK60_RS06085 PF05726 Pirin C-terminal cupin domain HKK60_RS06085 PF02678 Pirin HKK60_RS06090 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS06090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK60_RS06090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK60_RS06095 PF04542 Sigma-70 region 2 HKK60_RS06095 PF08281 Sigma-70, region 4 HKK60_RS06105 PF13180 PDZ domain HKK60_RS06110 PF00009 Elongation factor Tu GTP binding domain HKK60_RS06110 PF00679 Elongation factor G C-terminus HKK60_RS06110 PF03144 Elongation factor Tu domain 2 HKK60_RS06110 PF06421 GTP-binding protein LepA C-terminus HKK60_RS06115 PF10502 Signal peptidase, peptidase S26 HKK60_RS06125 PF14622 Ribonuclease-III-like HKK60_RS06125 PF00035 Double-stranded RNA binding motif HKK60_RS06130 PF07650 KH domain HKK60_RS06130 PF01926 50S ribosome-binding GTPase HKK60_RS06135 PF11967 Recombination protein O N terminal HKK60_RS06135 PF02565 Recombination protein O C terminal HKK60_RS06140 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS06140 PF00072 Response regulator receiver domain HKK60_RS06145 PF05958 tRNA (Uracil-5-)-methyltransferase HKK60_RS06150 PF01928 CYTH domain HKK60_RS06155 PF01323 DSBA-like thioredoxin domain HKK60_RS06160 PF00933 Glycosyl hydrolase family 3 N terminal domain HKK60_RS06170 PF01048 Phosphorylase superfamily HKK60_RS06175 PF00313 'Cold-shock' DNA-binding domain HKK60_RS06180 PF01494 FAD binding domain HKK60_RS06195 PF00271 Helicase conserved C-terminal domain HKK60_RS06195 PF08494 DEAD/H associated HKK60_RS06195 PF00270 DEAD/DEAH box helicase HKK60_RS06200 PF04679 ATP dependent DNA ligase C terminal region HKK60_RS06200 PF01068 ATP dependent DNA ligase domain HKK60_RS06200 PF04675 DNA ligase N terminus HKK60_RS06210 PF18158 Adaptive response protein AidB N-terminal domain HKK60_RS06210 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS06210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS06225 PF00108 Thiolase, N-terminal domain HKK60_RS06225 PF02803 Thiolase, C-terminal domain HKK60_RS06230 PF00082 Subtilase family HKK60_RS06230 PF03797 Autotransporter beta-domain HKK60_RS06235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HKK60_RS06235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HKK60_RS06245 PF13091 PLD-like domain HKK60_RS06255 PF01863 Protein of unknown function DUF45 HKK60_RS06260 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HKK60_RS06265 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKK60_RS06280 PF04542 Sigma-70 region 2 HKK60_RS06280 PF08281 Sigma-70, region 4 HKK60_RS06305 PF00012 Hsp70 protein HKK60_RS06310 PF03831 PhnA domain HKK60_RS06310 PF08274 PhnA Zinc-Ribbon HKK60_RS06340 PF03706 Lysylphosphatidylglycerol synthase TM region HKK60_RS06340 PF09924 Uncharacterised conserved protein (DUF2156) HKK60_RS06345 PF01042 Endoribonuclease L-PSP HKK60_RS06350 PF04060 Putative Fe-S cluster HKK60_RS06360 PF01588 Putative tRNA binding domain HKK60_RS06360 PF09334 tRNA synthetases class I (M) HKK60_RS06370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK60_RS06375 PF00144 Beta-lactamase HKK60_RS06375 PF11954 Domain of unknown function (DUF3471) HKK60_RS06385 PF02592 Putative vitamin uptake transporter HKK60_RS06405 PF01590 GAF domain HKK60_RS06405 PF00563 EAL domain HKK60_RS06405 PF00360 Phytochrome region HKK60_RS06405 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS06415 PF00085 Thioredoxin HKK60_RS06425 PF08264 Anticodon-binding domain of tRNA HKK60_RS06425 PF00133 tRNA synthetases class I (I, L, M and V) HKK60_RS06425 PF13603 Leucyl-tRNA synthetase, Domain 2 HKK60_RS06440 PF01467 Cytidylyltransferase-like HKK60_RS06450 PF02590 Predicted SPOUT methyltransferase HKK60_RS06460 PF13520 Amino acid permease HKK60_RS06465 PF00593 TonB dependent receptor HKK60_RS06465 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS06475 PF04402 Protein of unknown function (DUF541) HKK60_RS06480 PF02545 Maf-like protein HKK60_RS06485 PF10150 Ribonuclease E/G family HKK60_RS06485 PF00575 S1 RNA binding domain HKK60_RS06495 PF01523 Putative modulator of DNA gyrase HKK60_RS06500 PF04751 Protein of unknown function (DUF615) HKK60_RS06505 PF01523 Putative modulator of DNA gyrase HKK60_RS06515 PF00348 Polyprenyl synthetase HKK60_RS06520 PF02609 Exonuclease VII small subunit HKK60_RS06525 PF01171 PP-loop family HKK60_RS06525 PF09179 TilS substrate binding domain HKK60_RS06525 PF11734 TilS substrate C-terminal domain HKK60_RS06540 PF00375 Sodium:dicarboxylate symporter family HKK60_RS06545 PF00877 NlpC/P60 family HKK60_RS06550 PF00877 NlpC/P60 family HKK60_RS06555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK60_RS06560 PF04235 Protein of unknown function (DUF418) HKK60_RS06565 PF01266 FAD dependent oxidoreductase HKK60_RS06570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK60_RS06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS06575 PF00892 EamA-like transporter family HKK60_RS06605 PF01431 Peptidase family M13 HKK60_RS06605 PF05649 Peptidase family M13 HKK60_RS06610 PF00920 Dehydratase family HKK60_RS06615 PF00593 TonB dependent receptor HKK60_RS06615 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS06620 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS06620 PF00593 TonB dependent receptor HKK60_RS06625 PF10609 NUBPL iron-transfer P-loop NTPase HKK60_RS06640 PF00692 dUTPase HKK60_RS06655 PF01738 Dienelactone hydrolase family HKK60_RS06660 PF04055 Radical SAM superfamily HKK60_RS06660 PF00919 Uncharacterized protein family UPF0004 HKK60_RS06660 PF18693 TRAM domain HKK60_RS06670 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK60_RS06670 PF03449 Transcription elongation factor, N-terminal HKK60_RS06675 PF05872 Bacterial protein of unknown function (DUF853) HKK60_RS06690 PF02666 Phosphatidylserine decarboxylase HKK60_RS06695 PF02630 SCO1/SenC HKK60_RS06700 PF05175 Methyltransferase small domain HKK60_RS06705 PF01264 Chorismate synthase HKK60_RS06710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK60_RS06710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK60_RS06715 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKK60_RS06715 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKK60_RS06730 PF01416 tRNA pseudouridine synthase HKK60_RS06735 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HKK60_RS06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS06750 PF03466 LysR substrate binding domain HKK60_RS06755 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS06765 PF00290 Tryptophan synthase alpha chain HKK60_RS06770 PF01039 Carboxyl transferase domain HKK60_RS06770 PF17848 Acetyl-coA carboxylase zinc finger domain HKK60_RS06775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKK60_RS06775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKK60_RS06775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKK60_RS06775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKK60_RS06780 PF16363 GDP-mannose 4,6 dehydratase HKK60_RS06785 PF01522 Polysaccharide deacetylase HKK60_RS06790 PF13439 Glycosyltransferase Family 4 HKK60_RS06790 PF00534 Glycosyl transferases group 1 HKK60_RS06795 PF11893 Domain of unknown function (DUF3413) HKK60_RS06795 PF00884 Sulfatase HKK60_RS06805 PF00121 Triosephosphate isomerase HKK60_RS06820 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HKK60_RS06825 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HKK60_RS06830 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HKK60_RS06835 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HKK60_RS06845 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HKK60_RS06845 PF10531 SLBB domain HKK60_RS06845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HKK60_RS06850 PF00384 Molybdopterin oxidoreductase HKK60_RS06850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HKK60_RS06850 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HKK60_RS06855 PF00146 NADH dehydrogenase HKK60_RS06860 PF12838 4Fe-4S dicluster domain HKK60_RS06865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HKK60_RS06870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKK60_RS06875 PF00361 Proton-conducting membrane transporter HKK60_RS06875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKK60_RS06880 PF00361 Proton-conducting membrane transporter HKK60_RS06880 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HKK60_RS06885 PF00361 Proton-conducting membrane transporter HKK60_RS06900 PF17384 RimP C-terminal SH3 domain HKK60_RS06900 PF02576 RimP N-terminal domain HKK60_RS06905 PF08529 NusA N-terminal domain HKK60_RS06905 PF13184 NusA-like KH domain HKK60_RS06905 PF00575 S1 RNA binding domain HKK60_RS06910 PF11987 Translation-initiation factor 2 HKK60_RS06910 PF00009 Elongation factor Tu GTP binding domain HKK60_RS06910 PF08364 Bacterial translation initiation factor IF-2 associated region HKK60_RS06910 PF04760 Translation initiation factor IF-2, N-terminal region HKK60_RS06915 PF02033 Ribosome-binding factor A HKK60_RS06920 PF09157 Pseudouridine synthase II TruB, C-terminal HKK60_RS06920 PF16198 tRNA pseudouridylate synthase B C-terminal domain HKK60_RS06920 PF01509 TruB family pseudouridylate synthase (N terminal domain) HKK60_RS06925 PF00312 Ribosomal protein S15 HKK60_RS06930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HKK60_RS06930 PF00013 KH domain HKK60_RS06930 PF03725 3' exoribonuclease family, domain 2 HKK60_RS06930 PF01138 3' exoribonuclease family, domain 1 HKK60_RS06930 PF00575 S1 RNA binding domain HKK60_RS06935 PF00704 Glycosyl hydrolases family 18 HKK60_RS06935 PF00041 Fibronectin type III domain HKK60_RS06940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK60_RS06960 PF02824 TGS domain HKK60_RS06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKK60_RS06960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKK60_RS06960 PF03129 Anticodon binding domain HKK60_RS06965 PF05198 Translation initiation factor IF-3, N-terminal domain HKK60_RS06965 PF00707 Translation initiation factor IF-3, C-terminal domain HKK60_RS06970 PF01632 Ribosomal protein L35 HKK60_RS06975 PF00453 Ribosomal protein L20 HKK60_RS06980 PF01409 tRNA synthetases class II core domain (F) HKK60_RS06980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HKK60_RS06985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HKK60_RS06985 PF03147 Ferredoxin-fold anticodon binding domain HKK60_RS06985 PF03483 B3/4 domain HKK60_RS06985 PF03484 tRNA synthetase B5 domain HKK60_RS06985 PF01588 Putative tRNA binding domain HKK60_RS06990 PF00216 Bacterial DNA-binding protein HKK60_RS07060 PF03796 DnaB-like helicase C terminal domain HKK60_RS07060 PF00772 DnaB-like helicase N terminal domain HKK60_RS07125 PF01177 Asp/Glu/Hydantoin racemase HKK60_RS07130 PF01810 LysE type translocator HKK60_RS07135 PF07043 Protein of unknown function (DUF1328) HKK60_RS07145 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS07145 PF17932 Tetracyclin repressor-like, C-terminal domain HKK60_RS07175 PF02779 Transketolase, pyrimidine binding domain HKK60_RS07175 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HKK60_RS07175 PF02780 Transketolase, C-terminal domain HKK60_RS07185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS07185 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKK60_RS07185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK60_RS07185 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS07210 PF00107 Zinc-binding dehydrogenase HKK60_RS07210 PF16884 N-terminal domain of oxidoreductase HKK60_RS07215 PF12833 Helix-turn-helix domain HKK60_RS07215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKK60_RS07215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKK60_RS07215 PF02805 Metal binding domain of Ada HKK60_RS07240 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS07240 PF00593 TonB dependent receptor HKK60_RS07255 PF00570 HRDC domain HKK60_RS07255 PF01612 3'-5' exonuclease HKK60_RS07260 PF03781 Sulfatase-modifying factor enzyme 1 HKK60_RS07270 PF02601 Exonuclease VII, large subunit HKK60_RS07270 PF13742 OB-fold nucleic acid binding domain HKK60_RS07275 PF08331 Domain of unknown function (DUF1730) HKK60_RS07280 PF01256 Carbohydrate kinase HKK60_RS07280 PF03853 YjeF-related protein N-terminus HKK60_RS07285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HKK60_RS07290 PF01520 N-acetylmuramoyl-L-alanine amidase HKK60_RS07295 PF01119 DNA mismatch repair protein, C-terminal domain HKK60_RS07295 PF08676 MutL C terminal dimerisation domain HKK60_RS07310 PF05233 PHB accumulation regulatory domain HKK60_RS07310 PF07879 PHB/PHA accumulation regulator DNA-binding domain HKK60_RS07315 PF00106 short chain dehydrogenase HKK60_RS07320 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKK60_RS07325 PF01435 Peptidase family M48 HKK60_RS07330 PF00459 Inositol monophosphatase family HKK60_RS07335 PF00588 SpoU rRNA Methylase family HKK60_RS07345 PF13188 PAS domain HKK60_RS07345 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS07345 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS07345 PF00563 EAL domain HKK60_RS07350 PF04055 Radical SAM superfamily HKK60_RS07355 PF08207 Elongation factor P (EF-P) KOW-like domain HKK60_RS07355 PF01132 Elongation factor P (EF-P) OB domain HKK60_RS07355 PF09285 Elongation factor P, C-terminal HKK60_RS07360 PF01979 Amidohydrolase family HKK60_RS07370 PF13419 Haloacid dehalogenase-like hydrolase HKK60_RS07380 PF08460 Bacterial SH3 domain HKK60_RS07380 PF01551 Peptidase family M23 HKK60_RS07385 PF01979 Amidohydrolase family HKK60_RS07390 PF01809 Putative membrane protein insertion efficiency factor HKK60_RS07395 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKK60_RS07405 PF02657 Fe-S metabolism associated domain HKK60_RS07410 PF01406 tRNA synthetases class I (C) catalytic domain HKK60_RS07410 PF09190 DALR domain HKK60_RS07420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKK60_RS07420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKK60_RS07425 PF00764 Arginosuccinate synthase HKK60_RS07430 PF07687 Peptidase dimerisation domain HKK60_RS07430 PF01546 Peptidase family M20/M25/M40 HKK60_RS07435 PF00696 Amino acid kinase family HKK60_RS07435 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase HKK60_RS07445 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKK60_RS07450 PF00206 Lyase HKK60_RS07460 PF00696 Amino acid kinase family HKK60_RS07460 PF01472 PUA domain HKK60_RS07465 PF00171 Aldehyde dehydrogenase family HKK60_RS07475 PF00535 Glycosyl transferase family 2 HKK60_RS07480 PF14883 Hypothetical glycosyl hydrolase family 13 HKK60_RS07480 PF01522 Polysaccharide deacetylase HKK60_RS07510 PF02322 Cytochrome bd terminal oxidase subunit II HKK60_RS07515 PF01654 Cytochrome bd terminal oxidase subunit I HKK60_RS07520 PF00664 ABC transporter transmembrane region HKK60_RS07520 PF00005 ABC transporter HKK60_RS07525 PF00664 ABC transporter transmembrane region HKK60_RS07525 PF00005 ABC transporter HKK60_RS07535 PF00561 alpha/beta hydrolase fold HKK60_RS07545 PF03918 Cytochrome C biogenesis protein HKK60_RS07550 PF08534 Redoxin HKK60_RS07555 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HKK60_RS07555 PF01578 Cytochrome C assembly protein HKK60_RS07560 PF03100 CcmE HKK60_RS07570 PF01578 Cytochrome C assembly protein HKK60_RS07575 PF03379 CcmB protein HKK60_RS07580 PF00005 ABC transporter HKK60_RS07585 PF00155 Aminotransferase class I and II HKK60_RS07590 PF00795 Carbon-nitrogen hydrolase HKK60_RS07605 PF07690 Major Facilitator Superfamily HKK60_RS07615 PF01479 S4 domain HKK60_RS07615 PF00849 RNA pseudouridylate synthase HKK60_RS07620 PF04079 Segregation and condensation complex subunit ScpB HKK60_RS07625 PF02616 Segregation and condensation protein ScpA HKK60_RS07630 PF03795 YCII-related domain HKK60_RS07635 PF01722 BolA-like protein HKK60_RS07640 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS07655 PF01547 Bacterial extracellular solute-binding protein HKK60_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS07680 PF00575 S1 RNA binding domain HKK60_RS07680 PF10150 Ribonuclease E/G family HKK60_RS07680 PF12111 Polyribonucleotide phosphorylase C terminal HKK60_RS07685 PF01479 S4 domain HKK60_RS07685 PF00849 RNA pseudouridylate synthase HKK60_RS07690 PF02535 ZIP Zinc transporter HKK60_RS07700 PF01329 Pterin 4 alpha carbinolamine dehydratase HKK60_RS07705 PF01106 NifU-like domain HKK60_RS07720 PF00545 ribonuclease HKK60_RS07725 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKK60_RS07725 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKK60_RS07735 PF00854 POT family HKK60_RS07740 PF01694 Rhomboid family HKK60_RS07770 PF01432 Peptidase family M3 HKK60_RS07775 PF00255 Glutathione peroxidase HKK60_RS07780 PF00970 Oxidoreductase FAD-binding domain HKK60_RS07780 PF00175 Oxidoreductase NAD-binding domain HKK60_RS07785 PF00005 ABC transporter HKK60_RS07790 PF02627 Carboxymuconolactone decarboxylase family HKK60_RS07795 PF12680 SnoaL-like domain HKK60_RS07795 PF08281 Sigma-70, region 4 HKK60_RS07795 PF04542 Sigma-70 region 2 HKK60_RS07800 PF05683 Fumarase C-terminus HKK60_RS07800 PF05681 Fumarate hydratase (Fumerase) HKK60_RS07810 PF13417 Glutathione S-transferase, N-terminal domain HKK60_RS07810 PF00043 Glutathione S-transferase, C-terminal domain HKK60_RS07815 PF03960 ArsC family HKK60_RS07820 PF02253 Phospholipase A1 HKK60_RS07830 PF00313 'Cold-shock' DNA-binding domain HKK60_RS07840 PF01322 Cytochrome C' HKK60_RS07845 PF00899 ThiF family HKK60_RS07850 PF01026 TatD related DNase HKK60_RS07870 PF02798 Glutathione S-transferase, N-terminal domain HKK60_RS07875 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HKK60_RS07875 PF02780 Transketolase, C-terminal domain HKK60_RS07875 PF02779 Transketolase, pyrimidine binding domain HKK60_RS07880 PF13537 Glutamine amidotransferase domain HKK60_RS07880 PF00733 Asparagine synthase HKK60_RS07885 PF03358 NADPH-dependent FMN reductase HKK60_RS07890 PF03796 DnaB-like helicase C terminal domain HKK60_RS07890 PF00772 DnaB-like helicase N terminal domain HKK60_RS07900 PF16655 PhoD-like phosphatase, N-terminal domain HKK60_RS07900 PF09423 PhoD-like phosphatase HKK60_RS07915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK60_RS07915 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS07920 PF00364 Biotin-requiring enzyme HKK60_RS07920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKK60_RS07920 PF02817 e3 binding domain HKK60_RS07925 PF02779 Transketolase, pyrimidine binding domain HKK60_RS07925 PF16870 2-oxoglutarate dehydrogenase C-terminal HKK60_RS07925 PF16078 2-oxoglutarate dehydrogenase N-terminus HKK60_RS07925 PF00676 Dehydrogenase E1 component HKK60_RS07935 PF08007 Cupin superfamily protein HKK60_RS07940 PF08328 Adenylosuccinate lyase C-terminal HKK60_RS07940 PF00206 Lyase HKK60_RS07945 PF10415 Fumarase C C-terminus HKK60_RS07945 PF00206 Lyase HKK60_RS07970 PF00005 ABC transporter HKK60_RS07975 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS07985 PF00255 Glutathione peroxidase HKK60_RS07990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKK60_RS07990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK60_RS07995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKK60_RS07995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKK60_RS07995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKK60_RS08000 PF04102 SlyX HKK60_RS08020 PF01209 ubiE/COQ5 methyltransferase family HKK60_RS08025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK60_RS08025 PF02770 Acyl-CoA dehydrogenase, middle domain HKK60_RS08025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK60_RS08040 PF00873 AcrB/AcrD/AcrF family HKK60_RS08045 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS08045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS08055 PF05088 Bacterial NAD-glutamate dehydrogenase HKK60_RS08060 PF01513 ATP-NAD kinase HKK60_RS08080 PF00929 Exonuclease HKK60_RS08080 PF08411 Exonuclease C-terminal HKK60_RS08085 PF01494 FAD binding domain HKK60_RS08090 PF00266 Aminotransferase class-V HKK60_RS08095 PF06052 3-hydroxyanthranilic acid dioxygenase HKK60_RS08100 PF00484 Carbonic anhydrase HKK60_RS08120 PF00152 tRNA synthetases class II (D, K and N) HKK60_RS08120 PF01336 OB-fold nucleic acid binding domain HKK60_RS08125 PF01521 Iron-sulphur cluster biosynthesis HKK60_RS08130 PF03691 Uncharacterised protein family (UPF0167) HKK60_RS08135 PF01250 Ribosomal protein S6 HKK60_RS08140 PF01084 Ribosomal protein S18 HKK60_RS08145 PF03948 Ribosomal protein L9, C-terminal domain HKK60_RS08145 PF01281 Ribosomal protein L9, N-terminal domain HKK60_RS08150 PF02463 RecF/RecN/SMC N terminal domain HKK60_RS08155 PF04354 ZipA, C-terminal FtsZ-binding domain HKK60_RS08160 PF00155 Aminotransferase class I and II HKK60_RS08165 PF00533 BRCA1 C Terminus (BRCT) domain HKK60_RS08165 PF01653 NAD-dependent DNA ligase adenylation domain HKK60_RS08165 PF03120 NAD-dependent DNA ligase OB-fold domain HKK60_RS08165 PF12826 Helix-hairpin-helix motif HKK60_RS08165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HKK60_RS08175 PF00152 tRNA synthetases class II (D, K and N) HKK60_RS08185 PF01008 Initiation factor 2 subunit family HKK60_RS08190 PF03989 DNA gyrase C-terminal domain, beta-propeller HKK60_RS08190 PF00521 DNA gyrase/topoisomerase IV, subunit A HKK60_RS08195 PF13360 PQQ-like domain HKK60_RS08200 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS08200 PF00107 Zinc-binding dehydrogenase HKK60_RS08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS08205 PF03466 LysR substrate binding domain HKK60_RS08215 PF00144 Beta-lactamase HKK60_RS08270 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS08300 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS08300 PF00593 TonB dependent receptor HKK60_RS08305 PF00144 Beta-lactamase HKK60_RS08310 PF17392 Urocanase C-terminal domain HKK60_RS08310 PF01175 Urocanase Rossmann-like domain HKK60_RS08310 PF17391 Urocanase N-terminal domain HKK60_RS08320 PF00221 Aromatic amino acid lyase HKK60_RS08325 PF07969 Amidohydrolase family HKK60_RS08370 PF00266 Aminotransferase class-V HKK60_RS08375 PF01817 Chorismate mutase type II HKK60_RS08375 PF01842 ACT domain HKK60_RS08375 PF00800 Prephenate dehydratase HKK60_RS08380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKK60_RS08390 PF03544 Gram-negative bacterial TonB protein C-terminal HKK60_RS08395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKK60_RS08395 PF02403 Seryl-tRNA synthetase N-terminal domain HKK60_RS08405 PF02525 Flavodoxin-like fold HKK60_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS08410 PF03466 LysR substrate binding domain HKK60_RS08425 PF13361 UvrD-like helicase C-terminal domain HKK60_RS08425 PF00580 UvrD/REP helicase N-terminal domain HKK60_RS08425 PF12462 DNA helicase IV / RNA helicase N terminal HKK60_RS08435 PF00107 Zinc-binding dehydrogenase HKK60_RS08435 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS08440 PF01638 HxlR-like helix-turn-helix HKK60_RS08460 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS08460 PF00593 TonB dependent receptor HKK60_RS08465 PF17754 MftR C-terminal domain HKK60_RS08465 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS08475 PF00072 Response regulator receiver domain HKK60_RS08475 PF13426 PAS domain HKK60_RS08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS08505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK60_RS08505 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS08510 PF09278 MerR, DNA binding HKK60_RS08510 PF00376 MerR family regulatory protein HKK60_RS08515 PF07690 Major Facilitator Superfamily HKK60_RS08530 PF02534 Type IV secretory system Conjugative DNA transfer HKK60_RS08540 PF04335 VirB8 protein HKK60_RS08550 PF03743 Bacterial conjugation TrbI-like protein HKK60_RS08555 PF00437 Type II/IV secretion system protein HKK60_RS08560 PF01464 Transglycosylase SLT domain HKK60_RS08565 PF04956 TrbC/VIRB2 family HKK60_RS08570 PF05101 Type IV secretory pathway, VirB3-like protein HKK60_RS08575 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HKK60_RS08650 PF13673 Acetyltransferase (GNAT) domain HKK60_RS08655 PF02525 Flavodoxin-like fold HKK60_RS08660 PF01638 HxlR-like helix-turn-helix HKK60_RS08665 PF14437 MafB19-like deaminase HKK60_RS08670 PF00929 Exonuclease HKK60_RS08680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK60_RS08685 PF05552 Conserved TM helix HKK60_RS08685 PF00924 Mechanosensitive ion channel HKK60_RS08695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HKK60_RS08695 PF00391 PEP-utilising enzyme, mobile domain HKK60_RS08695 PF02896 PEP-utilising enzyme, TIM barrel domain HKK60_RS08700 PF03618 Kinase/pyrophosphorylase HKK60_RS08720 PF01554 MatE HKK60_RS08725 PF12697 Alpha/beta hydrolase family HKK60_RS08725 PF08241 Methyltransferase domain HKK60_RS08740 PF00561 alpha/beta hydrolase fold HKK60_RS08745 PF17263 Family of unknown function (DUF5329) HKK60_RS08750 PF04024 PspC domain HKK60_RS08765 PF00575 S1 RNA binding domain HKK60_RS08765 PF09371 Tex-like protein N-terminal domain HKK60_RS08765 PF17674 HHH domain HKK60_RS08765 PF16921 Tex protein YqgF-like domain HKK60_RS08770 PF00563 EAL domain HKK60_RS08770 PF13426 PAS domain HKK60_RS08770 PF08448 PAS fold HKK60_RS08770 PF08447 PAS fold HKK60_RS08770 PF05231 MASE1 HKK60_RS08770 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS08795 PF08447 PAS fold HKK60_RS08795 PF13426 PAS domain HKK60_RS08800 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS08800 PF00072 Response regulator receiver domain HKK60_RS08855 PF13411 MerR HTH family regulatory protein HKK60_RS08865 PF00578 AhpC/TSA family HKK60_RS08870 PF13098 Thioredoxin-like domain HKK60_RS08880 PF13520 Amino acid permease HKK60_RS08885 PF01276 Orn/Lys/Arg decarboxylase, major domain HKK60_RS08885 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HKK60_RS08885 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HKK60_RS08910 PF00593 TonB dependent receptor HKK60_RS08910 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS08920 PF04542 Sigma-70 region 2 HKK60_RS08920 PF08281 Sigma-70, region 4 HKK60_RS08935 PF00958 GMP synthase C terminal domain HKK60_RS08935 PF00117 Glutamine amidotransferase class-I HKK60_RS08935 PF02540 NAD synthase HKK60_RS08940 PF01168 Alanine racemase, N-terminal domain HKK60_RS08945 PF00155 Aminotransferase class I and II HKK60_RS08945 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS08955 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKK60_RS08955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKK60_RS08955 PF14579 Helix-hairpin-helix motif HKK60_RS08955 PF02811 PHP domain HKK60_RS08955 PF01336 OB-fold nucleic acid binding domain HKK60_RS08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS08980 PF03466 LysR substrate binding domain HKK60_RS09000 PF14310 Fibronectin type III-like domain HKK60_RS09000 PF00933 Glycosyl hydrolase family 3 N terminal domain HKK60_RS09000 PF07691 PA14 domain HKK60_RS09000 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKK60_RS09005 PF03466 LysR substrate binding domain HKK60_RS09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS09010 PF07690 Major Facilitator Superfamily HKK60_RS09025 PF12833 Helix-turn-helix domain HKK60_RS09035 PF02308 MgtC family HKK60_RS09040 PF02652 L-lactate permease HKK60_RS09045 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS09045 PF07729 FCD domain HKK60_RS09050 PF01070 FMN-dependent dehydrogenase HKK60_RS09055 PF01565 FAD binding domain HKK60_RS09055 PF09330 D-lactate dehydrogenase, membrane binding HKK60_RS09075 PF02611 CDP-diacylglycerol pyrophosphatase HKK60_RS09085 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS09085 PF00593 TonB dependent receptor HKK60_RS09100 PF01979 Amidohydrolase family HKK60_RS09110 PF03466 LysR substrate binding domain HKK60_RS09110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS09120 PF01979 Amidohydrolase family HKK60_RS09120 PF13382 Adenine deaminase C-terminal domain HKK60_RS09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS09125 PF03466 LysR substrate binding domain HKK60_RS09130 PF07690 Major Facilitator Superfamily HKK60_RS09135 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS09135 PF00072 Response regulator receiver domain HKK60_RS09140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HKK60_RS09140 PF07730 Histidine kinase HKK60_RS09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS09140 PF00672 HAMP domain HKK60_RS09150 PF12833 Helix-turn-helix domain HKK60_RS09150 PF10114 Sensory domain found in PocR HKK60_RS09155 PF00857 Isochorismatase family HKK60_RS09165 PF01979 Amidohydrolase family HKK60_RS09175 PF05977 Transmembrane secretion effector HKK60_RS09180 PF00561 alpha/beta hydrolase fold HKK60_RS09220 PF00437 Type II/IV secretion system protein HKK60_RS09230 PF04972 BON domain HKK60_RS09230 PF00263 Bacterial type II and III secretion system protein HKK60_RS09230 PF13629 Pilus formation protein N terminal region HKK60_RS09260 PF05658 Head domain of trimeric autotransporter adhesin HKK60_RS09260 PF03895 YadA-like membrane anchor domain HKK60_RS09260 PF05658 Head domain of trimeric autotransporter adhesin HKK60_RS09260 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK60_RS09260 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS09260 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK60_RS09260 PF03895 YadA-like membrane anchor domain HKK60_RS09260 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS09265 PF00691 OmpA family HKK60_RS09275 PF01209 ubiE/COQ5 methyltransferase family HKK60_RS09285 PF02308 MgtC family HKK60_RS09290 PF00654 Voltage gated chloride channel HKK60_RS09295 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS09295 PF07660 Secretin and TonB N terminus short domain HKK60_RS09295 PF00593 TonB dependent receptor HKK60_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS09305 PF03466 LysR substrate binding domain HKK60_RS09310 PF00893 Small Multidrug Resistance protein HKK60_RS09315 PF00893 Small Multidrug Resistance protein HKK60_RS09340 PF02028 BCCT, betaine/carnitine/choline family transporter HKK60_RS09345 PF00593 TonB dependent receptor HKK60_RS09345 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS09350 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK60_RS09350 PF14765 Polyketide synthase dehydratase HKK60_RS09350 PF16197 Ketoacyl-synthetase C-terminal extension HKK60_RS09350 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS09350 PF00550 Phosphopantetheine attachment site HKK60_RS09350 PF08659 KR domain HKK60_RS09350 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK60_RS09350 PF00698 Acyl transferase domain HKK60_RS09350 PF00107 Zinc-binding dehydrogenase HKK60_RS09355 PF00317 Ribonucleotide reductase, all-alpha domain HKK60_RS09355 PF03477 ATP cone domain HKK60_RS09355 PF02867 Ribonucleotide reductase, barrel domain HKK60_RS09360 PF00268 Ribonucleotide reductase, small chain HKK60_RS09375 PF01566 Natural resistance-associated macrophage protein HKK60_RS09380 PF02742 Iron dependent repressor, metal binding and dimerisation domain HKK60_RS09380 PF01325 Iron dependent repressor, N-terminal DNA binding domain HKK60_RS09395 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS09400 PF00175 Oxidoreductase NAD-binding domain HKK60_RS09400 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK60_RS09400 PF00970 Oxidoreductase FAD-binding domain HKK60_RS09405 PF00487 Fatty acid desaturase HKK60_RS09415 PF01613 Flavin reductase like domain HKK60_RS09420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKK60_RS09420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKK60_RS09435 PF00296 Luciferase-like monooxygenase HKK60_RS09440 PF03176 MMPL family HKK60_RS09440 PF12823 Domain of unknown function (DUF3817) HKK60_RS09445 PF07690 Major Facilitator Superfamily HKK60_RS09450 PF00425 chorismate binding enzyme HKK60_RS09455 PF00501 AMP-binding enzyme HKK60_RS09455 PF13193 AMP-binding enzyme C-terminal domain HKK60_RS09460 PF00857 Isochorismatase family HKK60_RS09460 PF00550 Phosphopantetheine attachment site HKK60_RS09465 PF00550 Phosphopantetheine attachment site HKK60_RS09465 PF00857 Isochorismatase family HKK60_RS09470 PF00501 AMP-binding enzyme HKK60_RS09470 PF00668 Condensation domain HKK60_RS09470 PF00550 Phosphopantetheine attachment site HKK60_RS09470 PF00975 Thioesterase domain HKK60_RS09475 PF00106 short chain dehydrogenase HKK60_RS09505 PF00691 OmpA family HKK60_RS09525 PF00884 Sulfatase HKK60_RS09525 PF08019 Phosphoethanolamine transferase EptA/EptB HKK60_RS09530 PF01219 Prokaryotic diacylglycerol kinase HKK60_RS09535 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS09535 PF00672 HAMP domain HKK60_RS09540 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS09540 PF00072 Response regulator receiver domain HKK60_RS09555 PF02321 Outer membrane efflux protein HKK60_RS09560 PF13533 Biotin-lipoyl like HKK60_RS09575 PF02311 AraC-like ligand binding domain HKK60_RS09575 PF12833 Helix-turn-helix domain HKK60_RS09580 PF00561 alpha/beta hydrolase fold HKK60_RS09615 PF04055 Radical SAM superfamily HKK60_RS09615 PF06463 Molybdenum Cofactor Synthesis C HKK60_RS09620 PF00994 Probable molybdopterin binding domain HKK60_RS09620 PF01967 MoaC family HKK60_RS09625 PF00994 Probable molybdopterin binding domain HKK60_RS09625 PF03454 MoeA C-terminal region (domain IV) HKK60_RS09625 PF03453 MoeA N-terminal region (domain I and II) HKK60_RS09635 PF02391 MoaE protein HKK60_RS09640 PF12804 MobA-like NTP transferase domain HKK60_RS09640 PF01967 MoaC family HKK60_RS09650 PF13545 Crp-like helix-turn-helix domain HKK60_RS09650 PF00027 Cyclic nucleotide-binding domain HKK60_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS09665 PF00005 ABC transporter HKK60_RS09665 PF08402 TOBE domain HKK60_RS09670 PF00667 FAD binding domain HKK60_RS09670 PF00258 Flavodoxin HKK60_RS09670 PF00175 Oxidoreductase NAD-binding domain HKK60_RS09675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS09675 PF08447 PAS fold HKK60_RS09680 PF00534 Glycosyl transferases group 1 HKK60_RS09680 PF08323 Starch synthase catalytic domain HKK60_RS09685 PF00128 Alpha amylase, catalytic domain HKK60_RS09685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HKK60_RS09685 PF02806 Alpha amylase, C-terminal all-beta domain HKK60_RS09690 PF00128 Alpha amylase, catalytic domain HKK60_RS09690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HKK60_RS09690 PF11941 Domain of unknown function (DUF3459) HKK60_RS09695 PF02446 4-alpha-glucanotransferase HKK60_RS09700 PF00128 Alpha amylase, catalytic domain HKK60_RS09710 PF00128 Alpha amylase, catalytic domain HKK60_RS09710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HKK60_RS09725 PF01037 Lrp/AsnC ligand binding domain HKK60_RS09735 PF04542 Sigma-70 region 2 HKK60_RS09735 PF08281 Sigma-70, region 4 HKK60_RS09755 PF08334 Type II secretion system (T2SS), protein G HKK60_RS09755 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS09775 PF00263 Bacterial type II and III secretion system protein HKK60_RS09775 PF03958 Bacterial type II/III secretion system short domain HKK60_RS09780 PF00437 Type II/IV secretion system protein HKK60_RS09785 PF00482 Type II secretion system (T2SS), protein F HKK60_RS09790 PF12849 PBP superfamily domain HKK60_RS09805 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS09805 PF02501 Type II secretion system (T2SS), protein I HKK60_RS09810 PF12019 Type II transport protein GspH HKK60_RS09810 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS09830 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS09835 PF02472 Biopolymer transport protein ExbD/TolR HKK60_RS09860 PF00857 Isochorismatase family HKK60_RS09865 PF01979 Amidohydrolase family HKK60_RS09875 PF00857 Isochorismatase family HKK60_RS09880 PF02678 Pirin HKK60_RS09880 PF05726 Pirin C-terminal cupin domain HKK60_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS09885 PF03466 LysR substrate binding domain HKK60_RS09900 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS09900 PF07660 Secretin and TonB N terminus short domain HKK60_RS09900 PF00593 TonB dependent receptor HKK60_RS09920 PF13426 PAS domain HKK60_RS09920 PF08447 PAS fold HKK60_RS09920 PF07536 HWE histidine kinase HKK60_RS09930 PF03668 P-loop ATPase protein family HKK60_RS09940 PF08946 Osmosensory transporter coiled coil HKK60_RS09940 PF00083 Sugar (and other) transporter HKK60_RS09955 PF17678 Glycosyl hydrolase family 92 N-terminal domain HKK60_RS09955 PF07971 Glycosyl hydrolase family 92 HKK60_RS09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS09960 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS09960 PF08521 Two-component sensor kinase N-terminal HKK60_RS09965 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS09965 PF00072 Response regulator receiver domain HKK60_RS09975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS09975 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS09980 PF00873 AcrB/AcrD/AcrF family HKK60_RS09990 PF03466 LysR substrate binding domain HKK60_RS09990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS09995 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS09995 PF00672 HAMP domain HKK60_RS10000 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS10000 PF00072 Response regulator receiver domain HKK60_RS10005 PF05425 Copper resistance protein D HKK60_RS10010 PF04234 CopC domain HKK60_RS10030 PF00248 Aldo/keto reductase family HKK60_RS10035 PF03466 LysR substrate binding domain HKK60_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS10050 PF00005 ABC transporter HKK60_RS10075 PF07690 Major Facilitator Superfamily HKK60_RS10095 PF02634 FdhD/NarQ family HKK60_RS10100 PF00384 Molybdopterin oxidoreductase HKK60_RS10115 PF00753 Metallo-beta-lactamase superfamily HKK60_RS10140 PF06772 Bacterial low temperature requirement A protein (LtrA) HKK60_RS10150 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS10150 PF00072 Response regulator receiver domain HKK60_RS10155 PF08447 PAS fold HKK60_RS10155 PF00989 PAS fold HKK60_RS10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS10155 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS10155 PF13493 Domain of unknown function (DUF4118) HKK60_RS10155 PF13426 PAS domain HKK60_RS10160 PF02308 MgtC family HKK60_RS10165 PF00689 Cation transporting ATPase, C-terminus HKK60_RS10165 PF00690 Cation transporter/ATPase, N-terminus HKK60_RS10180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS10185 PF00873 AcrB/AcrD/AcrF family HKK60_RS10190 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS10190 PF00072 Response regulator receiver domain HKK60_RS10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS10195 PF00672 HAMP domain HKK60_RS10195 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS10200 PF00561 alpha/beta hydrolase fold HKK60_RS10210 PF00593 TonB dependent receptor HKK60_RS10210 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS10220 PF06224 Winged helix DNA-binding domain HKK60_RS10230 PF00672 HAMP domain HKK60_RS10230 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS10235 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS10235 PF00072 Response regulator receiver domain HKK60_RS10245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS10250 PF12704 MacB-like periplasmic core domain HKK60_RS10250 PF00005 ABC transporter HKK60_RS10250 PF02687 FtsX-like permease family HKK60_RS10270 PF00296 Luciferase-like monooxygenase HKK60_RS10275 PF16657 Maltogenic Amylase, C-terminal domain HKK60_RS10275 PF00128 Alpha amylase, catalytic domain HKK60_RS10280 PF03372 Endonuclease/Exonuclease/phosphatase family HKK60_RS10285 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS10285 PF00563 EAL domain HKK60_RS10285 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS10295 PF02245 Methylpurine-DNA glycosylase (MPG) HKK60_RS10360 PF02954 Bacterial regulatory protein, Fis family HKK60_RS10360 PF00072 Response regulator receiver domain HKK60_RS10360 PF00158 Sigma-54 interaction domain HKK60_RS10385 PF03466 LysR substrate binding domain HKK60_RS10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS10405 PF13419 Haloacid dehalogenase-like hydrolase HKK60_RS10435 PF00294 pfkB family carbohydrate kinase HKK60_RS10450 PF07690 Major Facilitator Superfamily HKK60_RS10455 PF07940 Heparinase II/III-like protein HKK60_RS10455 PF05426 Alginate lyase HKK60_RS10460 PF14592 Chondroitinase B HKK60_RS10470 PF07729 FCD domain HKK60_RS10470 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS10480 PF03358 NADPH-dependent FMN reductase HKK60_RS10485 PF13193 AMP-binding enzyme C-terminal domain HKK60_RS10485 PF00501 AMP-binding enzyme HKK60_RS10490 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS10490 PF00072 Response regulator receiver domain HKK60_RS10495 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS10495 PF00672 HAMP domain HKK60_RS10500 PF01575 MaoC like domain HKK60_RS10505 PF00561 alpha/beta hydrolase fold HKK60_RS10510 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS10510 PF00593 TonB dependent receptor HKK60_RS10515 PF10503 Esterase PHB depolymerase HKK60_RS10520 PF00144 Beta-lactamase HKK60_RS10535 PF08267 Cobalamin-independent synthase, N-terminal domain HKK60_RS10535 PF01717 Cobalamin-independent synthase, Catalytic domain HKK60_RS10545 PF03358 NADPH-dependent FMN reductase HKK60_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS10550 PF03466 LysR substrate binding domain HKK60_RS10555 PF02219 Methylenetetrahydrofolate reductase HKK60_RS10575 PF17755 UvrA DNA-binding domain HKK60_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS10580 PF03466 LysR substrate binding domain HKK60_RS10585 PF04303 PrpF protein HKK60_RS10595 PF00005 ABC transporter HKK60_RS10600 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS10610 PF03600 Citrate transporter HKK60_RS10615 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKK60_RS10615 PF00933 Glycosyl hydrolase family 3 N terminal domain HKK60_RS10615 PF14310 Fibronectin type III-like domain HKK60_RS10620 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS10625 PF07690 Major Facilitator Superfamily HKK60_RS10630 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS10630 PF00593 TonB dependent receptor HKK60_RS10640 PF00144 Beta-lactamase HKK60_RS10645 PF02469 Fasciclin domain HKK60_RS10650 PF01638 HxlR-like helix-turn-helix HKK60_RS10665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HKK60_RS10670 PF00294 pfkB family carbohydrate kinase HKK60_RS10675 PF00381 PTS HPr component phosphorylation site HKK60_RS10675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKK60_RS10675 PF02896 PEP-utilising enzyme, TIM barrel domain HKK60_RS10675 PF00391 PEP-utilising enzyme, mobile domain HKK60_RS10675 PF05524 PEP-utilising enzyme, N-terminal HKK60_RS10680 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS10710 PF13823 Alcohol dehydrogenase GroES-associated HKK60_RS10710 PF00107 Zinc-binding dehydrogenase HKK60_RS10710 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS10730 PF00398 Ribosomal RNA adenine dimethylase HKK60_RS10755 PF05974 Domain of unknown function (DUF892) HKK60_RS10760 PF05067 Manganese containing catalase HKK60_RS10780 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKK60_RS10780 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKK60_RS10785 PF05974 Domain of unknown function (DUF892) HKK60_RS10795 PF04679 ATP dependent DNA ligase C terminal region HKK60_RS10795 PF01068 ATP dependent DNA ligase domain HKK60_RS10795 PF13298 DNA polymerase Ligase (LigD) HKK60_RS10815 PF00355 Rieske [2Fe-2S] domain HKK60_RS10830 PF00106 short chain dehydrogenase HKK60_RS10835 PF01965 DJ-1/PfpI family HKK60_RS10840 PF00561 alpha/beta hydrolase fold HKK60_RS10845 PF16123 Hydroxyacylglutathione hydrolase C-terminus HKK60_RS10845 PF00753 Metallo-beta-lactamase superfamily HKK60_RS10850 PF12680 SnoaL-like domain HKK60_RS10850 PF08281 Sigma-70, region 4 HKK60_RS10850 PF04542 Sigma-70 region 2 HKK60_RS10870 PF03466 LysR substrate binding domain HKK60_RS10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS10880 PF02566 OsmC-like protein HKK60_RS10890 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK60_RS10890 PF01799 [2Fe-2S] binding domain HKK60_RS10890 PF10518 TAT (twin-arginine translocation) pathway signal sequence HKK60_RS10895 PF03450 CO dehydrogenase flavoprotein C-terminal domain HKK60_RS10895 PF00941 FAD binding domain in molybdopterin dehydrogenase HKK60_RS10900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKK60_RS10900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HKK60_RS10905 PF13478 XdhC Rossmann domain HKK60_RS10905 PF02625 XdhC and CoxI family HKK60_RS10910 PF12804 MobA-like NTP transferase domain HKK60_RS10940 PF00106 short chain dehydrogenase HKK60_RS11005 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11010 PF00583 Acetyltransferase (GNAT) family HKK60_RS11020 PF03073 TspO/MBR family HKK60_RS11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11030 PF08446 PAS fold HKK60_RS11030 PF01590 GAF domain HKK60_RS11030 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS11030 PF00360 Phytochrome region HKK60_RS11035 PF00072 Response regulator receiver domain HKK60_RS11040 PF00072 Response regulator receiver domain HKK60_RS11040 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS11040 PF08448 PAS fold HKK60_RS11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11040 PF13188 PAS domain HKK60_RS11055 PF08281 Sigma-70, region 4 HKK60_RS11055 PF04542 Sigma-70 region 2 HKK60_RS11070 PF01593 Flavin containing amine oxidoreductase HKK60_RS11125 PF03764 Elongation factor G, domain IV HKK60_RS11125 PF03144 Elongation factor Tu domain 2 HKK60_RS11125 PF00679 Elongation factor G C-terminus HKK60_RS11125 PF00009 Elongation factor Tu GTP binding domain HKK60_RS11125 PF14492 Elongation Factor G, domain II HKK60_RS11135 PF00005 ABC transporter HKK60_RS11140 PF01032 FecCD transport family HKK60_RS11145 PF01497 Periplasmic binding protein HKK60_RS11155 PF00756 Putative esterase HKK60_RS11175 PF16193 AAA C-terminal domain HKK60_RS11175 PF12002 MgsA AAA+ ATPase C terminal HKK60_RS11175 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS11180 PF03548 Outer membrane lipoprotein carrier protein LolA HKK60_RS11190 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HKK60_RS11190 PF01580 FtsK/SpoIIIE family HKK60_RS11190 PF17854 FtsK alpha domain HKK60_RS11190 PF09397 Ftsk gamma domain HKK60_RS11195 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS11215 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HKK60_RS11220 PF01176 Translation initiation factor 1A / IF-1 HKK60_RS11230 PF17871 AAA lid domain HKK60_RS11230 PF02861 Clp amino terminal domain, pathogenicity island component HKK60_RS11230 PF07724 AAA domain (Cdc48 subfamily) HKK60_RS11230 PF10431 C-terminal, D2-small domain, of ClpB protein HKK60_RS11230 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS11235 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HKK60_RS11240 PF02617 ATP-dependent Clp protease adaptor protein ClpS HKK60_RS11250 PF00293 NUDIX domain HKK60_RS11260 PF04356 Protein of unknown function (DUF489) HKK60_RS11265 PF12729 Four helix bundle sensory module for signal transduction HKK60_RS11265 PF00672 HAMP domain HKK60_RS11265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS11280 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS11280 PF00563 EAL domain HKK60_RS11280 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS11285 PF07730 Histidine kinase HKK60_RS11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11290 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS11290 PF00563 EAL domain HKK60_RS11290 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS11295 PF00989 PAS fold HKK60_RS11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11295 PF13188 PAS domain HKK60_RS11295 PF13426 PAS domain HKK60_RS11295 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS11315 PF00072 Response regulator receiver domain HKK60_RS11315 PF01584 CheW-like domain HKK60_RS11320 PF00460 Flagella basal body rod protein HKK60_RS11325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK60_RS11325 PF00460 Flagella basal body rod protein HKK60_RS11335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK60_RS11335 PF07559 Flagellar basal body protein FlaE HKK60_RS11335 PF00460 Flagella basal body rod protein HKK60_RS11340 PF00460 Flagella basal body rod protein HKK60_RS11340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK60_RS11345 PF00460 Flagella basal body rod protein HKK60_RS11345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK60_RS11350 PF02107 Flagellar L-ring protein HKK60_RS11355 PF02119 Flagellar P-ring protein HKK60_RS11360 PF10135 Rod binding protein HKK60_RS11360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HKK60_RS11365 PF00460 Flagella basal body rod protein HKK60_RS11365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK60_RS11375 PF00700 Bacterial flagellin C-terminal helical region HKK60_RS11375 PF00669 Bacterial flagellin N-terminal helical region HKK60_RS11380 PF00700 Bacterial flagellin C-terminal helical region HKK60_RS11380 PF00669 Bacterial flagellin N-terminal helical region HKK60_RS11385 PF00669 Bacterial flagellin N-terminal helical region HKK60_RS11385 PF00700 Bacterial flagellin C-terminal helical region HKK60_RS11390 PF07195 Flagellar hook-associated protein 2 C-terminus HKK60_RS11390 PF02465 Flagellar hook-associated protein 2 N-terminus HKK60_RS11395 PF02561 Flagellar protein FliS HKK60_RS11410 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS11410 PF00072 Response regulator receiver domain HKK60_RS11415 PF04963 Sigma-54 factor, core binding domain HKK60_RS11415 PF04552 Sigma-54, DNA binding domain HKK60_RS11415 PF00309 Sigma-54 factor, Activator interacting domain (AID) HKK60_RS11420 PF00072 Response regulator receiver domain HKK60_RS11420 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS11425 PF06490 Flagellar regulatory protein FleQ HKK60_RS11425 PF02954 Bacterial regulatory protein, Fis family HKK60_RS11425 PF00158 Sigma-54 interaction domain HKK60_RS11440 PF02049 Flagellar hook-basal body complex protein FliE HKK60_RS11445 PF08345 Flagellar M-ring protein C-terminal HKK60_RS11445 PF01514 Secretory protein of YscJ/FliF family HKK60_RS11450 PF01706 FliG C-terminal domain HKK60_RS11450 PF14841 FliG middle domain HKK60_RS11450 PF14842 FliG N-terminal domain HKK60_RS11460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK60_RS11460 PF18269 T3SS EscN ATPase C-terminal domain HKK60_RS11480 PF02154 Flagellar motor switch protein FliM HKK60_RS11480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HKK60_RS11485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HKK60_RS11490 PF04347 Flagellar biosynthesis protein, FliO HKK60_RS11495 PF00813 FliP family HKK60_RS11500 PF01313 Bacterial export proteins, family 3 HKK60_RS11505 PF01311 Bacterial export proteins, family 1 HKK60_RS11510 PF00563 EAL domain HKK60_RS11510 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS11510 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS11520 PF01312 FlhB HrpN YscU SpaS Family HKK60_RS11525 PF00771 FHIPEP family HKK60_RS11530 PF00448 SRP54-type protein, GTPase domain HKK60_RS11535 PF10609 NUBPL iron-transfer P-loop NTPase HKK60_RS11540 PF04545 Sigma-70, region 4 HKK60_RS11540 PF04542 Sigma-70 region 2 HKK60_RS11540 PF04539 Sigma-70 region 3 HKK60_RS11545 PF00072 Response regulator receiver domain HKK60_RS11550 PF04344 Chemotaxis phosphatase, CheZ HKK60_RS11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11555 PF02895 Signal transducing histidine kinase, homodimeric domain HKK60_RS11555 PF01584 CheW-like domain HKK60_RS11555 PF01627 Hpt domain HKK60_RS11555 PF00072 Response regulator receiver domain HKK60_RS11560 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS11565 PF00691 OmpA family HKK60_RS11565 PF13677 Membrane MotB of proton-channel complex MotA/MotB HKK60_RS11570 PF13614 AAA domain HKK60_RS11575 PF01584 CheW-like domain HKK60_RS11585 PF00072 Response regulator receiver domain HKK60_RS11590 PF02895 Signal transducing histidine kinase, homodimeric domain HKK60_RS11590 PF01584 CheW-like domain HKK60_RS11590 PF01627 Hpt domain HKK60_RS11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11590 PF09078 CheY binding HKK60_RS11595 PF00672 HAMP domain HKK60_RS11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS11595 PF02203 Tar ligand binding domain homologue HKK60_RS11600 PF07317 Flagellar regulator YcgR HKK60_RS11600 PF07238 PilZ domain HKK60_RS11605 PF01584 CheW-like domain HKK60_RS11615 PF02203 Tar ligand binding domain homologue HKK60_RS11615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS11615 PF00672 HAMP domain HKK60_RS11620 PF02203 Tar ligand binding domain homologue HKK60_RS11620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS11620 PF00672 HAMP domain HKK60_RS11625 PF01739 CheR methyltransferase, SAM binding domain HKK60_RS11625 PF03705 CheR methyltransferase, all-alpha domain HKK60_RS11630 PF03975 CheD chemotactic sensory transduction HKK60_RS11635 PF00072 Response regulator receiver domain HKK60_RS11635 PF01339 CheB methylesterase HKK60_RS11650 PF11791 Aconitate B N-terminal domain HKK60_RS11650 PF06434 Aconitate hydratase 2 N-terminus HKK60_RS11650 PF00330 Aconitase family (aconitate hydratase) HKK60_RS11670 PF00694 Aconitase C-terminal domain HKK60_RS11670 PF00330 Aconitase family (aconitate hydratase) HKK60_RS11675 PF02028 BCCT, betaine/carnitine/choline family transporter HKK60_RS11680 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS11680 PF13977 BetI-type transcriptional repressor, C-terminal HKK60_RS11685 PF00171 Aldehyde dehydrogenase family HKK60_RS11690 PF00732 GMC oxidoreductase HKK60_RS11690 PF05199 GMC oxidoreductase HKK60_RS11695 PF00501 AMP-binding enzyme HKK60_RS11695 PF13193 AMP-binding enzyme C-terminal domain HKK60_RS11700 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS11705 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS11705 PF01627 Hpt domain HKK60_RS11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11705 PF00072 Response regulator receiver domain HKK60_RS11715 PF00072 Response regulator receiver domain HKK60_RS11720 PF00152 tRNA synthetases class II (D, K and N) HKK60_RS11720 PF01336 OB-fold nucleic acid binding domain HKK60_RS11725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK60_RS11725 PF00205 Thiamine pyrophosphate enzyme, central domain HKK60_RS11725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK60_RS11730 PF00171 Aldehyde dehydrogenase family HKK60_RS11745 PF00072 Response regulator receiver domain HKK60_RS11745 PF04397 LytTr DNA-binding domain HKK60_RS11755 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HKK60_RS11760 PF01368 DHH family HKK60_RS11760 PF17768 RecJ OB domain HKK60_RS11760 PF02272 DHHA1 domain HKK60_RS11775 PF03449 Transcription elongation factor, N-terminal HKK60_RS11775 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK60_RS11780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK60_RS11780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HKK60_RS11780 PF02142 MGS-like domain HKK60_RS11785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HKK60_RS11785 PF00117 Glutamine amidotransferase class-I HKK60_RS11790 PF01113 Dihydrodipicolinate reductase, N-terminus HKK60_RS11790 PF05173 Dihydrodipicolinate reductase, C-terminus HKK60_RS11805 PF02525 Flavodoxin-like fold HKK60_RS11820 PF07670 Nucleoside recognition HKK60_RS11820 PF02421 Ferrous iron transport protein B HKK60_RS11820 PF07664 Ferrous iron transport protein B C terminus HKK60_RS11830 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS11830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK60_RS11830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK60_RS11840 PF00682 HMGL-like HKK60_RS11845 PF00106 short chain dehydrogenase HKK60_RS11850 PF09285 Elongation factor P, C-terminal HKK60_RS11850 PF08207 Elongation factor P (EF-P) KOW-like domain HKK60_RS11850 PF01132 Elongation factor P (EF-P) OB domain HKK60_RS11865 PF00873 AcrB/AcrD/AcrF family HKK60_RS11870 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS11870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS11875 PF00072 Response regulator receiver domain HKK60_RS11875 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS11880 PF00672 HAMP domain HKK60_RS11880 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS11895 PF01565 FAD binding domain HKK60_RS11895 PF02913 FAD linked oxidases, C-terminal domain HKK60_RS11900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK60_RS11900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK60_RS11910 PF13520 Amino acid permease HKK60_RS11915 PF13520 Amino acid permease HKK60_RS11930 PF00596 Class II Aldolase and Adducin N-terminal domain HKK60_RS11935 PF03079 ARD/ARD' family HKK60_RS11955 PF00294 pfkB family carbohydrate kinase HKK60_RS11960 PF07690 Major Facilitator Superfamily HKK60_RS11965 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS11970 PF07971 Glycosyl hydrolase family 92 HKK60_RS11970 PF17678 Glycosyl hydrolase family 92 N-terminal domain HKK60_RS11985 PF09278 MerR, DNA binding HKK60_RS11985 PF00376 MerR family regulatory protein HKK60_RS11990 PF00403 Heavy-metal-associated domain HKK60_RS11995 PF00593 TonB dependent receptor HKK60_RS11995 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS12005 PF03932 CutC family HKK60_RS12010 PF01112 Asparaginase HKK60_RS12015 PF02685 Glucokinase HKK60_RS12030 PF01502 Phosphoribosyl-AMP cyclohydrolase HKK60_RS12030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HKK60_RS12035 PF00977 Histidine biosynthesis protein HKK60_RS12040 PF00977 Histidine biosynthesis protein HKK60_RS12045 PF00117 Glutamine amidotransferase class-I HKK60_RS12050 PF08645 Polynucleotide kinase 3 phosphatase HKK60_RS12050 PF00475 Imidazoleglycerol-phosphate dehydratase HKK60_RS12055 PF00155 Aminotransferase class I and II HKK60_RS12060 PF00815 Histidinol dehydrogenase HKK60_RS12065 PF08029 HisG, C-terminal domain HKK60_RS12065 PF01634 ATP phosphoribosyltransferase HKK60_RS12075 PF13393 Histidyl-tRNA synthetase HKK60_RS12075 PF03129 Anticodon binding domain HKK60_RS12080 PF13545 Crp-like helix-turn-helix domain HKK60_RS12080 PF00027 Cyclic nucleotide-binding domain HKK60_RS12085 PF14821 Threonine synthase N terminus HKK60_RS12085 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS12090 PF08544 GHMP kinases C terminal HKK60_RS12090 PF00288 GHMP kinases N terminal domain HKK60_RS12095 PF00742 Homoserine dehydrogenase HKK60_RS12095 PF00696 Amino acid kinase family HKK60_RS12095 PF01842 ACT domain HKK60_RS12095 PF03447 Homoserine dehydrogenase, NAD binding domain HKK60_RS12095 PF13840 ACT domain HKK60_RS12130 PF04143 Sulphur transport HKK60_RS12135 PF01022 Bacterial regulatory protein, arsR family HKK60_RS12140 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS12140 PF02743 Cache domain HKK60_RS12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS12145 PF01339 CheB methylesterase HKK60_RS12150 PF01739 CheR methyltransferase, SAM binding domain HKK60_RS12150 PF03705 CheR methyltransferase, all-alpha domain HKK60_RS12155 PF00672 HAMP domain HKK60_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS12155 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS12155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKK60_RS12155 PF00072 Response regulator receiver domain HKK60_RS12155 PF01627 Hpt domain HKK60_RS12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS12160 PF13426 PAS domain HKK60_RS12160 PF00072 Response regulator receiver domain HKK60_RS12165 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS12165 PF00072 Response regulator receiver domain HKK60_RS12205 PF00171 Aldehyde dehydrogenase family HKK60_RS12225 PF01180 Dihydroorotate dehydrogenase HKK60_RS12230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HKK60_RS12230 PF01565 FAD binding domain HKK60_RS12235 PF00892 EamA-like transporter family HKK60_RS12250 PF17932 Tetracyclin repressor-like, C-terminal domain HKK60_RS12250 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS12260 PF01636 Phosphotransferase enzyme family HKK60_RS12270 PF00581 Rhodanese-like domain HKK60_RS12280 PF00106 short chain dehydrogenase HKK60_RS12285 PF07690 Major Facilitator Superfamily HKK60_RS12290 PF03466 LysR substrate binding domain HKK60_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS12295 PF00563 EAL domain HKK60_RS12295 PF12792 CSS motif domain associated with EAL HKK60_RS12300 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS12300 PF08361 MAATS-type transcriptional repressor, C-terminal region HKK60_RS12305 PF12706 Beta-lactamase superfamily domain HKK60_RS12330 PF00583 Acetyltransferase (GNAT) family HKK60_RS12335 PF07687 Peptidase dimerisation domain HKK60_RS12335 PF01546 Peptidase family M20/M25/M40 HKK60_RS12340 PF00296 Luciferase-like monooxygenase HKK60_RS12345 PF00296 Luciferase-like monooxygenase HKK60_RS12355 PF03358 NADPH-dependent FMN reductase HKK60_RS12360 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS12360 PF00593 TonB dependent receptor HKK60_RS12365 PF01965 DJ-1/PfpI family HKK60_RS12390 PF06100 MCRA family HKK60_RS12405 PF01022 Bacterial regulatory protein, arsR family HKK60_RS12430 PF00106 short chain dehydrogenase HKK60_RS12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS12460 PF03466 LysR substrate binding domain HKK60_RS12485 PF02540 NAD synthase HKK60_RS12485 PF00117 Glutamine amidotransferase class-I HKK60_RS12485 PF00958 GMP synthase C terminal domain HKK60_RS12490 PF00478 IMP dehydrogenase / GMP reductase domain HKK60_RS12490 PF00571 CBS domain HKK60_RS12495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HKK60_RS12495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HKK60_RS12500 PF02254 TrkA-N domain HKK60_RS12500 PF00999 Sodium/hydrogen exchanger family HKK60_RS12505 PF00899 ThiF family HKK60_RS12525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HKK60_RS12525 PF01926 50S ribosome-binding GTPase HKK60_RS12530 PF01011 PQQ enzyme repeat HKK60_RS12530 PF13360 PQQ-like domain HKK60_RS12540 PF13464 Domain of unknown function (DUF4115) HKK60_RS12540 PF13464 Domain of unknown function (DUF4115) HKK60_RS12550 PF04055 Radical SAM superfamily HKK60_RS12555 PF00334 Nucleoside diphosphate kinase HKK60_RS12565 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS12565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK60_RS12565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK60_RS12570 PF00108 Thiolase, N-terminal domain HKK60_RS12570 PF02803 Thiolase, C-terminal domain HKK60_RS12575 PF00483 Nucleotidyl transferase HKK60_RS12580 PF02719 Polysaccharide biosynthesis protein HKK60_RS12585 PF00953 Glycosyl transferase family 4 HKK60_RS12590 PF18073 Rubredoxin metal binding domain HKK60_RS12600 PF00216 Bacterial DNA-binding protein HKK60_RS12605 PF00575 S1 RNA binding domain HKK60_RS12610 PF02224 Cytidylate kinase HKK60_RS12615 PF00444 Ribosomal protein L36 HKK60_RS12625 PF04371 Porphyromonas-type peptidyl-arginine deiminase HKK60_RS12630 PF00795 Carbon-nitrogen hydrolase HKK60_RS12645 PF00873 AcrB/AcrD/AcrF family HKK60_RS12650 PF00873 AcrB/AcrD/AcrF family HKK60_RS12655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS12665 PF00034 Cytochrome c HKK60_RS12675 PF03466 LysR substrate binding domain HKK60_RS12675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS12680 PF03601 Conserved hypothetical protein 698 HKK60_RS12685 PF00271 Helicase conserved C-terminal domain HKK60_RS12685 PF03880 DbpA RNA binding domain HKK60_RS12685 PF00270 DEAD/DEAH box helicase HKK60_RS12690 PF00156 Phosphoribosyl transferase domain HKK60_RS12695 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HKK60_RS12700 PF02798 Glutathione S-transferase, N-terminal domain HKK60_RS12705 PF00313 'Cold-shock' DNA-binding domain HKK60_RS12710 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HKK60_RS12715 PF00849 RNA pseudouridylate synthase HKK60_RS12720 PF07152 YaeQ protein HKK60_RS12730 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS12730 PF00072 Response regulator receiver domain HKK60_RS12730 PF00563 EAL domain HKK60_RS12735 PF12241 Trans-2-enoyl-CoA reductase catalytic region HKK60_RS12735 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HKK60_RS12735 PF07055 Enoyl reductase FAD binding domain HKK60_RS12740 PF07549 SecD/SecF GG Motif HKK60_RS12740 PF02355 Protein export membrane protein HKK60_RS12745 PF02355 Protein export membrane protein HKK60_RS12745 PF13721 SecD export protein N-terminal TM region HKK60_RS12745 PF07549 SecD/SecF GG Motif HKK60_RS12750 PF02699 Preprotein translocase subunit HKK60_RS12755 PF01702 Queuine tRNA-ribosyltransferase HKK60_RS12765 PF02547 Queuosine biosynthesis protein HKK60_RS12770 PF00202 Aminotransferase class-III HKK60_RS12775 PF03641 Possible lysine decarboxylase HKK60_RS12780 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS12780 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS12780 PF00563 EAL domain HKK60_RS12785 PF04542 Sigma-70 region 2 HKK60_RS12785 PF04545 Sigma-70, region 4 HKK60_RS12795 PF01205 Uncharacterized protein family UPF0029 HKK60_RS12800 PF00664 ABC transporter transmembrane region HKK60_RS12800 PF00005 ABC transporter HKK60_RS12810 PF02153 Prephenate dehydrogenase HKK60_RS12810 PF01817 Chorismate mutase type II HKK60_RS12815 PF08543 Phosphomethylpyrimidine kinase HKK60_RS12820 PF07690 Major Facilitator Superfamily HKK60_RS12825 PF02311 AraC-like ligand binding domain HKK60_RS12825 PF12833 Helix-turn-helix domain HKK60_RS12830 PF01556 DnaJ C terminal domain HKK60_RS12830 PF00226 DnaJ domain HKK60_RS12830 PF00684 DnaJ central domain HKK60_RS12835 PF00012 Hsp70 protein HKK60_RS12840 PF01025 GrpE HKK60_RS12845 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HKK60_RS12845 PF01628 HrcA protein C terminal domain HKK60_RS12850 PF02463 RecF/RecN/SMC N terminal domain HKK60_RS12855 PF03466 LysR substrate binding domain HKK60_RS12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS12865 PF01475 Ferric uptake regulator family HKK60_RS12870 PF04355 SmpA / OmlA family HKK60_RS12875 PF03658 RnfH family Ubiquitin HKK60_RS12880 PF03364 Polyketide cyclase / dehydrase and lipid transport HKK60_RS12885 PF01668 SmpB protein HKK60_RS12925 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS12925 PF03472 Autoinducer binding domain HKK60_RS12960 PF02321 Outer membrane efflux protein HKK60_RS12965 PF00106 short chain dehydrogenase HKK60_RS12970 PF00873 AcrB/AcrD/AcrF family HKK60_RS12975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS12990 PF03466 LysR substrate binding domain HKK60_RS12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS12995 PF13488 Glycine zipper HKK60_RS12995 PF00691 OmpA family HKK60_RS13000 PF03441 FAD binding domain of DNA photolyase HKK60_RS13000 PF00875 DNA photolyase HKK60_RS13010 PF00719 Inorganic pyrophosphatase HKK60_RS13050 PF00753 Metallo-beta-lactamase superfamily HKK60_RS13060 PF00037 4Fe-4S binding domain HKK60_RS13070 PF01467 Cytidylyltransferase-like HKK60_RS13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS13080 PF00183 Hsp90 protein HKK60_RS13090 PF00448 SRP54-type protein, GTPase domain HKK60_RS13090 PF02881 SRP54-type protein, helical bundle domain HKK60_RS13095 PF14815 NUDIX domain HKK60_RS13095 PF00730 HhH-GPD superfamily base excision DNA repair protein HKK60_RS13095 PF00633 Helix-hairpin-helix motif HKK60_RS13100 PF04362 Bacterial Fe(2+) trafficking HKK60_RS13110 PF00005 ABC transporter HKK60_RS13115 PF02687 FtsX-like permease family HKK60_RS13115 PF12704 MacB-like periplasmic core domain HKK60_RS13125 PF03937 Flavinator of succinate dehydrogenase HKK60_RS13130 PF13085 2Fe-2S iron-sulfur cluster binding domain HKK60_RS13130 PF13237 4Fe-4S dicluster domain HKK60_RS13135 PF02910 Fumarate reductase flavoprotein C-term HKK60_RS13135 PF00890 FAD binding domain HKK60_RS13140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKK60_RS13145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKK60_RS13160 PF17912 MalK OB fold domain HKK60_RS13160 PF00005 ABC transporter HKK60_RS13165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HKK60_RS13165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HKK60_RS13170 PF02685 Glucokinase HKK60_RS13175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HKK60_RS13180 PF00920 Dehydratase family HKK60_RS13185 PF01081 KDPG and KHG aldolase HKK60_RS13190 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS13190 PF00072 Response regulator receiver domain HKK60_RS13195 PF01569 PAP2 superfamily HKK60_RS13200 PF04551 GcpE protein HKK60_RS13205 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS13210 PF02954 Bacterial regulatory protein, Fis family HKK60_RS13210 PF00072 Response regulator receiver domain HKK60_RS13215 PF00342 Phosphoglucose isomerase HKK60_RS13220 PF02261 Aspartate decarboxylase HKK60_RS13230 PF02569 Pantoate-beta-alanine ligase HKK60_RS13235 PF02548 Ketopantoate hydroxymethyltransferase HKK60_RS13240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKK60_RS13245 PF01743 Poly A polymerase head domain HKK60_RS13245 PF12626 Polymerase A arginine-rich C-terminus HKK60_RS13245 PF12627 Probable RNA and SrmB- binding site of polymerase A HKK60_RS13255 PF00083 Sugar (and other) transporter HKK60_RS13260 PF11953 Domain of unknown function (DUF3470) HKK60_RS13260 PF00037 4Fe-4S binding domain HKK60_RS13270 PF00701 Dihydrodipicolinate synthetase family HKK60_RS13280 PF00578 AhpC/TSA family HKK60_RS13285 PF02562 PhoH-like protein HKK60_RS13285 PF13638 PIN domain HKK60_RS13300 PF02581 Thiamine monophosphate synthase HKK60_RS13300 PF08543 Phosphomethylpyrimidine kinase HKK60_RS13325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS13325 PF03466 LysR substrate binding domain HKK60_RS13330 PF02678 Pirin HKK60_RS13330 PF17954 Quercetinase C-terminal cupin domain HKK60_RS13335 PF07660 Secretin and TonB N terminus short domain HKK60_RS13335 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS13335 PF00593 TonB dependent receptor HKK60_RS13345 PF07690 Major Facilitator Superfamily HKK60_RS13355 PF00034 Cytochrome c HKK60_RS13355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK60_RS13360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK60_RS13365 PF00593 TonB dependent receptor HKK60_RS13365 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS13370 PF04185 Phosphoesterase family HKK60_RS13370 PF05506 Domain of unknown function (DUF756) HKK60_RS13375 PF09423 PhoD-like phosphatase HKK60_RS13375 PF16655 PhoD-like phosphatase, N-terminal domain HKK60_RS13400 PF00456 Transketolase, thiamine diphosphate binding domain HKK60_RS13400 PF17831 Pyruvate dehydrogenase E1 component middle domain HKK60_RS13425 PF02599 Global regulator protein family HKK60_RS13430 PF01411 tRNA synthetases class II (A) HKK60_RS13430 PF02272 DHHA1 domain HKK60_RS13430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKK60_RS13435 PF02631 RecX family HKK60_RS13440 PF00154 recA bacterial DNA recombination protein HKK60_RS13445 PF01726 LexA DNA binding domain HKK60_RS13445 PF00717 Peptidase S24-like HKK60_RS13450 PF03109 ABC1 family HKK60_RS13455 PF02464 Competence-damaged protein HKK60_RS13460 PF13167 GTP-binding GTPase N-terminal HKK60_RS13460 PF16360 GTP-binding GTPase Middle Region HKK60_RS13460 PF01926 50S ribosome-binding GTPase HKK60_RS13465 PF17209 Hfq protein HKK60_RS13475 PF00809 Pterin binding enzyme HKK60_RS13485 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS13485 PF06480 FtsH Extracellular HKK60_RS13485 PF01434 Peptidase family M41 HKK60_RS13485 PF17862 AAA+ lid domain HKK60_RS13490 PF01728 FtsJ-like methyltransferase HKK60_RS13495 PF01985 CRS1 / YhbY (CRM) domain HKK60_RS13500 PF04430 Protein of unknown function (DUF498/DUF598) HKK60_RS13510 PF01551 Peptidase family M23 HKK60_RS13510 PF01476 LysM domain HKK60_RS13525 PF01975 Survival protein SurE HKK60_RS13530 PF01713 Smr domain HKK60_RS13535 PF01142 tRNA pseudouridine synthase D (TruD) HKK60_RS13540 PF02542 YgbB family HKK60_RS13545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HKK60_RS13550 PF04977 Septum formation initiator HKK60_RS13555 PF03952 Enolase, N-terminal domain HKK60_RS13555 PF00113 Enolase, C-terminal TIM barrel domain HKK60_RS13570 PF00793 DAHP synthetase I family HKK60_RS13575 PF00117 Glutamine amidotransferase class-I HKK60_RS13575 PF06418 CTP synthase N-terminus HKK60_RS13585 PF00204 DNA gyrase B HKK60_RS13585 PF00986 DNA gyrase B subunit, carboxyl terminus HKK60_RS13585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS13585 PF01751 Toprim domain HKK60_RS13590 PF13302 Acetyltransferase (GNAT) domain HKK60_RS13600 PF01384 Phosphate transporter family HKK60_RS13610 PF01595 Cyclin M transmembrane N-terminal domain HKK60_RS13610 PF03471 Transporter associated domain HKK60_RS13610 PF00571 CBS domain HKK60_RS13625 PF00296 Luciferase-like monooxygenase HKK60_RS13640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK60_RS13645 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS13645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKK60_RS13650 PF13673 Acetyltransferase (GNAT) domain HKK60_RS13655 PF01645 Conserved region in glutamate synthase HKK60_RS13660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKK60_RS13660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKK60_RS13660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKK60_RS13675 PF04055 Radical SAM superfamily HKK60_RS13675 PF06969 HemN C-terminal domain HKK60_RS13690 PF13746 4Fe-4S dicluster domain HKK60_RS13690 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HKK60_RS13690 PF12801 4Fe-4S binding domain HKK60_RS13710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HKK60_RS13715 PF02311 AraC-like ligand binding domain HKK60_RS13715 PF12833 Helix-turn-helix domain HKK60_RS13730 PF00248 Aldo/keto reductase family HKK60_RS13735 PF03466 LysR substrate binding domain HKK60_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS13760 PF01613 Flavin reductase like domain HKK60_RS13780 PF00293 NUDIX domain HKK60_RS13780 PF13344 Haloacid dehalogenase-like hydrolase HKK60_RS13820 PF12704 MacB-like periplasmic core domain HKK60_RS13820 PF02687 FtsX-like permease family HKK60_RS13820 PF00005 ABC transporter HKK60_RS13830 PF02321 Outer membrane efflux protein HKK60_RS13855 PF01066 CDP-alcohol phosphatidyltransferase HKK60_RS13860 PF08459 UvrC Helix-hairpin-helix N-terminal HKK60_RS13860 PF02151 UvrB/uvrC motif HKK60_RS13860 PF01541 GIY-YIG catalytic domain HKK60_RS13870 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKK60_RS13875 PF02348 Cytidylyltransferase HKK60_RS13880 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HKK60_RS13885 PF00664 ABC transporter transmembrane region HKK60_RS13885 PF00005 ABC transporter HKK60_RS13895 PF01618 MotA/TolQ/ExbB proton channel family HKK60_RS13905 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS13905 PF00672 HAMP domain HKK60_RS13910 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS13910 PF00072 Response regulator receiver domain HKK60_RS13915 PF06629 MltA-interacting protein MipA HKK60_RS13955 PF17757 UvrB interaction domain HKK60_RS13955 PF00271 Helicase conserved C-terminal domain HKK60_RS13955 PF02151 UvrB/uvrC motif HKK60_RS13955 PF12344 Ultra-violet resistance protein B HKK60_RS13955 PF04851 Type III restriction enzyme, res subunit HKK60_RS13970 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS13970 PF14245 Type IV pilin PilA HKK60_RS13975 PF05567 Neisseria PilC beta-propeller domain HKK60_RS14000 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HKK60_RS14000 PF03641 Possible lysine decarboxylase HKK60_RS14000 PF11892 Domain of unknown function (DUF3412) HKK60_RS14005 PF00593 TonB dependent receptor HKK60_RS14015 PF00462 Glutaredoxin HKK60_RS14020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKK60_RS14020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKK60_RS14025 PF02627 Carboxymuconolactone decarboxylase family HKK60_RS14030 PF02222 ATP-grasp domain HKK60_RS14030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HKK60_RS14035 PF00731 AIR carboxylase HKK60_RS14045 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HKK60_RS14045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HKK60_RS14060 PF04386 Stringent starvation protein B HKK60_RS14065 PF00043 Glutathione S-transferase, C-terminal domain HKK60_RS14065 PF02798 Glutathione S-transferase, N-terminal domain HKK60_RS14070 PF02167 Cytochrome C1 family HKK60_RS14075 PF00032 Cytochrome b(C-terminal)/b6/petD HKK60_RS14075 PF00033 Cytochrome b/b6/petB HKK60_RS14080 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HKK60_RS14080 PF00355 Rieske [2Fe-2S] domain HKK60_RS14085 PF01464 Transglycosylase SLT domain HKK60_RS14095 PF13417 Glutathione S-transferase, N-terminal domain HKK60_RS14100 PF04055 Radical SAM superfamily HKK60_RS14100 PF00919 Uncharacterized protein family UPF0004 HKK60_RS14100 PF01938 TRAM domain HKK60_RS14110 PF00005 ABC transporter HKK60_RS14120 PF02562 PhoH-like protein HKK60_RS14125 PF02130 Uncharacterized protein family UPF0054 HKK60_RS14145 PF00571 CBS domain HKK60_RS14145 PF03471 Transporter associated domain HKK60_RS14160 PF00171 Aldehyde dehydrogenase family HKK60_RS14165 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS14170 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS14175 PF08402 TOBE domain HKK60_RS14175 PF00005 ABC transporter HKK60_RS14185 PF13416 Bacterial extracellular solute-binding protein HKK60_RS14190 PF00120 Glutamine synthetase, catalytic domain HKK60_RS14195 PF07722 Peptidase C26 HKK60_RS14200 PF01266 FAD dependent oxidoreductase HKK60_RS14215 PF00072 Response regulator receiver domain HKK60_RS14215 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14220 PF01814 Hemerythrin HHE cation binding domain HKK60_RS14225 PF07690 Major Facilitator Superfamily HKK60_RS14225 PF00083 Sugar (and other) transporter HKK60_RS14235 PF00171 Aldehyde dehydrogenase family HKK60_RS14240 PF00202 Aminotransferase class-III HKK60_RS14250 PF04286 Protein of unknown function (DUF445) HKK60_RS14270 PF10672 S-adenosylmethionine-dependent methyltransferase HKK60_RS14270 PF01170 Putative RNA methylase family UPF0020 HKK60_RS14270 PF02926 THUMP domain HKK60_RS14285 PF00581 Rhodanese-like domain HKK60_RS14290 PF00293 NUDIX domain HKK60_RS14295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKK60_RS14295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK60_RS14300 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS14310 PF00730 HhH-GPD superfamily base excision DNA repair protein HKK60_RS14310 PF00633 Helix-hairpin-helix motif HKK60_RS14310 PF10576 Iron-sulfur binding domain of endonuclease III HKK60_RS14320 PF12849 PBP superfamily domain HKK60_RS14325 PF12849 PBP superfamily domain HKK60_RS14330 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS14335 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS14340 PF00005 ABC transporter HKK60_RS14345 PF01895 PhoU domain HKK60_RS14355 PF05114 Protein of unknown function (DUF692) HKK60_RS14365 PF07681 DoxX HKK60_RS14370 PF00929 Exonuclease HKK60_RS14375 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14375 PF17158 Membrane-associated sensor, integral membrane domain HKK60_RS14380 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS14380 PF00672 HAMP domain HKK60_RS14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS14385 PF00072 Response regulator receiver domain HKK60_RS14385 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS14390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS14395 PF12704 MacB-like periplasmic core domain HKK60_RS14395 PF02687 FtsX-like permease family HKK60_RS14395 PF00005 ABC transporter HKK60_RS14400 PF02321 Outer membrane efflux protein HKK60_RS14405 PF00588 SpoU rRNA Methylase family HKK60_RS14405 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKK60_RS14415 PF00773 RNB domain HKK60_RS14415 PF08461 Ribonuclease R winged-helix domain HKK60_RS14415 PF17876 Cold shock domain HKK60_RS14415 PF00575 S1 RNA binding domain HKK60_RS14415 PF08206 Ribonuclease B OB domain HKK60_RS14435 PF03466 LysR substrate binding domain HKK60_RS14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS14450 PF07690 Major Facilitator Superfamily HKK60_RS14455 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS14455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS14460 PF02321 Outer membrane efflux protein HKK60_RS14470 PF12833 Helix-turn-helix domain HKK60_RS14475 PF03989 DNA gyrase C-terminal domain, beta-propeller HKK60_RS14475 PF00521 DNA gyrase/topoisomerase IV, subunit A HKK60_RS14480 PF00210 Ferritin-like domain HKK60_RS14485 PF01804 Penicillin amidase HKK60_RS14490 PF00999 Sodium/hydrogen exchanger family HKK60_RS14495 PF13537 Glutamine amidotransferase domain HKK60_RS14495 PF00733 Asparagine synthase HKK60_RS14500 PF01546 Peptidase family M20/M25/M40 HKK60_RS14500 PF07687 Peptidase dimerisation domain HKK60_RS14505 PF03960 ArsC family HKK60_RS14515 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HKK60_RS14515 PF14602 Hexapeptide repeat of succinyl-transferase HKK60_RS14515 PF00132 Bacterial transferase hexapeptide (six repeats) HKK60_RS14520 PF01909 Nucleotidyltransferase domain HKK60_RS14520 PF08335 GlnD PII-uridylyltransferase HKK60_RS14520 PF01966 HD domain HKK60_RS14525 PF00557 Metallopeptidase family M24 HKK60_RS14540 PF00577 Outer membrane usher protein HKK60_RS14540 PF13953 PapC C-terminal domain HKK60_RS14540 PF13954 PapC N-terminal domain HKK60_RS14560 PF00318 Ribosomal protein S2 HKK60_RS14565 PF00889 Elongation factor TS HKK60_RS14570 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14575 PF00696 Amino acid kinase family HKK60_RS14580 PF01765 Ribosome recycling factor HKK60_RS14585 PF01255 Putative undecaprenyl diphosphate synthase HKK60_RS14595 PF13288 DXP reductoisomerase C-terminal domain HKK60_RS14595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HKK60_RS14595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HKK60_RS14600 PF02163 Peptidase family M50 HKK60_RS14600 PF17820 PDZ domain HKK60_RS14605 PF07244 Surface antigen variable number repeat HKK60_RS14605 PF01103 Surface antigen HKK60_RS14610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HKK60_RS14610 PF00132 Bacterial transferase hexapeptide (six repeats) HKK60_RS14615 PF07977 FabA-like domain HKK60_RS14620 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HKK60_RS14620 PF00132 Bacterial transferase hexapeptide (six repeats) HKK60_RS14625 PF02684 Lipid-A-disaccharide synthetase HKK60_RS14630 PF01351 Ribonuclease HII HKK60_RS14635 PF14579 Helix-hairpin-helix motif HKK60_RS14635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKK60_RS14635 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKK60_RS14635 PF01336 OB-fold nucleic acid binding domain HKK60_RS14635 PF02811 PHP domain HKK60_RS14645 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HKK60_RS14670 PF03551 Transcriptional regulator PadR-like family HKK60_RS14675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKK60_RS14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS14685 PF03466 LysR substrate binding domain HKK60_RS14710 PF05426 Alginate lyase HKK60_RS14715 PF00328 Histidine phosphatase superfamily (branch 2) HKK60_RS14720 PF00005 ABC transporter HKK60_RS14720 PF00664 ABC transporter transmembrane region HKK60_RS14725 PF07930 D-aminopeptidase, domain B HKK60_RS14725 PF00144 Beta-lactamase HKK60_RS14745 PF02463 RecF/RecN/SMC N terminal domain HKK60_RS14750 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14750 PF08448 PAS fold HKK60_RS14755 PF01479 S4 domain HKK60_RS14755 PF00849 RNA pseudouridylate synthase HKK60_RS14760 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS14760 PF00563 EAL domain HKK60_RS14760 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14765 PF00563 EAL domain HKK60_RS14765 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14765 PF08448 PAS fold HKK60_RS14770 PF03880 DbpA RNA binding domain HKK60_RS14770 PF00270 DEAD/DEAH box helicase HKK60_RS14770 PF00271 Helicase conserved C-terminal domain HKK60_RS14780 PF01494 FAD binding domain HKK60_RS14800 PF02805 Metal binding domain of Ada HKK60_RS14800 PF06029 AlkA N-terminal domain HKK60_RS14800 PF00730 HhH-GPD superfamily base excision DNA repair protein HKK60_RS14800 PF12833 Helix-turn-helix domain HKK60_RS14805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKK60_RS14805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKK60_RS14825 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS14825 PF00593 TonB dependent receptor HKK60_RS14840 PF13533 Biotin-lipoyl like HKK60_RS14845 PF01475 Ferric uptake regulator family HKK60_RS14850 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKK60_RS14855 PF04389 Peptidase family M28 HKK60_RS14855 PF02225 PA domain HKK60_RS14865 PF06123 Inner membrane protein CreD HKK60_RS14870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS14870 PF00672 HAMP domain HKK60_RS14870 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS14875 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS14875 PF00072 Response regulator receiver domain HKK60_RS14880 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HKK60_RS14890 PF03461 TRCF domain HKK60_RS14890 PF00271 Helicase conserved C-terminal domain HKK60_RS14890 PF00270 DEAD/DEAH box helicase HKK60_RS14890 PF02559 CarD-like/TRCF domain HKK60_RS14890 PF17757 UvrB interaction domain HKK60_RS14895 PF00072 Response regulator receiver domain HKK60_RS14895 PF01966 HD domain HKK60_RS14900 PF05649 Peptidase family M13 HKK60_RS14900 PF01431 Peptidase family M13 HKK60_RS14905 PF00300 Histidine phosphatase superfamily (branch 1) HKK60_RS14910 PF04493 Endonuclease V HKK60_RS14915 PF01545 Cation efflux family HKK60_RS14925 PF00593 TonB dependent receptor HKK60_RS14925 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS14930 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS14935 PF07690 Major Facilitator Superfamily HKK60_RS14940 PF01638 HxlR-like helix-turn-helix HKK60_RS14950 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS14950 PF00072 Response regulator receiver domain HKK60_RS14955 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS14955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS14960 PF12146 Serine aminopeptidase, S33 HKK60_RS14965 PF00892 EamA-like transporter family HKK60_RS14970 PF00892 EamA-like transporter family HKK60_RS14975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HKK60_RS15010 PF00557 Metallopeptidase family M24 HKK60_RS15015 PF03965 Penicillinase repressor HKK60_RS15020 PF04225 Opacity-associated protein A LysM-like domain HKK60_RS15020 PF01551 Peptidase family M23 HKK60_RS15025 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS15025 PF00593 TonB dependent receptor HKK60_RS15045 PF13533 Biotin-lipoyl like HKK60_RS15065 PF00672 HAMP domain HKK60_RS15065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS15135 PF05193 Peptidase M16 inactive domain HKK60_RS15135 PF00675 Insulinase (Peptidase family M16) HKK60_RS15165 PF00816 H-NS histone family HKK60_RS15170 PF00664 ABC transporter transmembrane region HKK60_RS15170 PF00005 ABC transporter HKK60_RS15170 PF03412 Peptidase C39 family HKK60_RS15215 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS15215 PF00072 Response regulator receiver domain HKK60_RS15220 PF02321 Outer membrane efflux protein HKK60_RS15235 PF00873 AcrB/AcrD/AcrF family HKK60_RS15260 PF00155 Aminotransferase class I and II HKK60_RS15260 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS15265 PF00563 EAL domain HKK60_RS15265 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS15265 PF13426 PAS domain HKK60_RS15270 PF00672 HAMP domain HKK60_RS15270 PF02203 Tar ligand binding domain homologue HKK60_RS15270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS15290 PF00544 Pectate lyase HKK60_RS15300 PF04055 Radical SAM superfamily HKK60_RS15300 PF13186 Iron-sulfur cluster-binding domain HKK60_RS15320 PF00816 H-NS histone family HKK60_RS15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS15355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK60_RS15365 PF00085 Thioredoxin HKK60_RS15370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK60_RS15380 PF01323 DSBA-like thioredoxin domain HKK60_RS15390 PF02627 Carboxymuconolactone decarboxylase family HKK60_RS15420 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HKK60_RS15440 PF05190 MutS family domain IV HKK60_RS15440 PF01624 MutS domain I HKK60_RS15440 PF05188 MutS domain II HKK60_RS15440 PF05192 MutS domain III HKK60_RS15440 PF00488 MutS domain V HKK60_RS15445 PF06628 Catalase-related immune-responsive HKK60_RS15445 PF00199 Catalase HKK60_RS15455 PF01479 S4 domain HKK60_RS15465 PF01554 MatE HKK60_RS15485 PF01245 Ribosomal protein L19 HKK60_RS15490 PF01746 tRNA (Guanine-1)-methyltransferase HKK60_RS15495 PF01782 RimM N-terminal domain HKK60_RS15495 PF05239 PRC-barrel domain HKK60_RS15500 PF00886 Ribosomal protein S16 HKK60_RS15510 PF03060 Nitronate monooxygenase HKK60_RS15515 PF00448 SRP54-type protein, GTPase domain HKK60_RS15515 PF02881 SRP54-type protein, helical bundle domain HKK60_RS15515 PF02978 Signal peptide binding domain HKK60_RS15535 PF00183 Hsp90 protein HKK60_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS15540 PF18073 Rubredoxin metal binding domain HKK60_RS15545 PF00563 EAL domain HKK60_RS15545 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS15545 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS15550 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HKK60_RS15555 PF00510 Cytochrome c oxidase subunit III HKK60_RS15560 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK60_RS15565 PF06481 COX Aromatic Rich Motif HKK60_RS15565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKK60_RS15610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK60_RS15610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK60_RS15630 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS15630 PF00593 TonB dependent receptor HKK60_RS15645 PF07947 YhhN family HKK60_RS15670 PF02401 LytB protein HKK60_RS15675 PF01252 Signal peptidase (SPase) II HKK60_RS15680 PF08264 Anticodon-binding domain of tRNA HKK60_RS15680 PF00133 tRNA synthetases class I (I, L, M and V) HKK60_RS15680 PF06827 Zinc finger found in FPG and IleRS HKK60_RS15685 PF01687 Riboflavin kinase HKK60_RS15685 PF06574 FAD synthetase HKK60_RS15690 PF03023 Lipid II flippase MurJ HKK60_RS15695 PF01649 Ribosomal protein S20 HKK60_RS15700 PF01926 50S ribosome-binding GTPase HKK60_RS15700 PF01018 GTP1/OBG HKK60_RS15705 PF01016 Ribosomal L27 protein HKK60_RS15710 PF00829 Ribosomal prokaryotic L21 protein HKK60_RS15715 PF17760 UvrA interaction domain HKK60_RS15715 PF17755 UvrA DNA-binding domain HKK60_RS15715 PF00005 ABC transporter HKK60_RS15735 PF00378 Enoyl-CoA hydratase/isomerase HKK60_RS15750 PF04542 Sigma-70 region 2 HKK60_RS15750 PF08281 Sigma-70, region 4 HKK60_RS15760 PF04376 Arginine-tRNA-protein transferase, N terminus HKK60_RS15760 PF04377 Arginine-tRNA-protein transferase, C terminus HKK60_RS15770 PF02222 ATP-grasp domain HKK60_RS15770 PF01370 NAD dependent epimerase/dehydratase family HKK60_RS15810 PF00072 Response regulator receiver domain HKK60_RS15810 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS15815 PF07730 Histidine kinase HKK60_RS15825 PF05209 Septum formation inhibitor MinC, N-terminal domain HKK60_RS15825 PF03775 Septum formation inhibitor MinC, C-terminal domain HKK60_RS15830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKK60_RS15835 PF03776 Septum formation topological specificity factor MinE HKK60_RS15850 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HKK60_RS15850 PF07676 WD40-like Beta Propeller Repeat HKK60_RS15850 PF00326 Prolyl oligopeptidase family HKK60_RS15855 PF03169 OPT oligopeptide transporter protein HKK60_RS15870 PF00854 POT family HKK60_RS15890 PF13673 Acetyltransferase (GNAT) domain HKK60_RS15895 PF06039 Malate:quinone oxidoreductase (Mqo) HKK60_RS15900 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS15900 PF07660 Secretin and TonB N terminus short domain HKK60_RS15900 PF00593 TonB dependent receptor HKK60_RS15905 PF16957 Malonate decarboxylase, alpha subunit, transporter HKK60_RS15910 PF06857 Malonate decarboxylase delta subunit (MdcD) HKK60_RS15915 PF01039 Carboxyl transferase domain HKK60_RS15925 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HKK60_RS15930 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HKK60_RS15935 PF00698 Acyl transferase domain HKK60_RS15945 PF07729 FCD domain HKK60_RS15945 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS15955 PF01156 Inosine-uridine preferring nucleoside hydrolase HKK60_RS15960 PF00083 Sugar (and other) transporter HKK60_RS15960 PF08946 Osmosensory transporter coiled coil HKK60_RS15970 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS15970 PF00672 HAMP domain HKK60_RS15975 PF00072 Response regulator receiver domain HKK60_RS15975 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS15980 PF00578 AhpC/TSA family HKK60_RS15980 PF02683 Cytochrome C biogenesis protein transmembrane region HKK60_RS15980 PF17991 Thioredoxin like C-terminal domain HKK60_RS15990 PF07681 DoxX HKK60_RS16000 PF05114 Protein of unknown function (DUF692) HKK60_RS16010 PF01794 Ferric reductase like transmembrane component HKK60_RS16015 PF00149 Calcineurin-like phosphoesterase HKK60_RS16020 PF03471 Transporter associated domain HKK60_RS16020 PF03741 Integral membrane protein TerC family HKK60_RS16020 PF00571 CBS domain HKK60_RS16025 PF13443 Cro/C1-type HTH DNA-binding domain HKK60_RS16040 PF01022 Bacterial regulatory protein, arsR family HKK60_RS16065 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS16075 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS16075 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS16075 PF00563 EAL domain HKK60_RS16080 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS16090 PF03825 Nucleoside H+ symporter HKK60_RS16095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK60_RS16095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK60_RS16105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK60_RS16105 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HKK60_RS16120 PF05199 GMC oxidoreductase HKK60_RS16120 PF00732 GMC oxidoreductase HKK60_RS16130 PF00436 Single-strand binding protein family HKK60_RS16135 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS16140 PF13732 Domain of unknown function (DUF4162) HKK60_RS16140 PF00005 ABC transporter HKK60_RS16165 PF00128 Alpha amylase, catalytic domain HKK60_RS16165 PF00686 Starch binding domain HKK60_RS16170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HKK60_RS16180 PF14508 Glycosyl-hydrolase 97 N-terminal HKK60_RS16180 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation HKK60_RS16180 PF10566 Glycoside hydrolase 97 HKK60_RS16190 PF00128 Alpha amylase, catalytic domain HKK60_RS16195 PF00348 Polyprenyl synthetase HKK60_RS16215 PF02875 Mur ligase family, glutamate ligase domain HKK60_RS16215 PF08245 Mur ligase middle domain HKK60_RS16225 PF00696 Amino acid kinase family HKK60_RS16225 PF01842 ACT domain HKK60_RS16230 PF02567 Phenazine biosynthesis-like protein HKK60_RS16235 PF02567 Phenazine biosynthesis-like protein HKK60_RS16240 PF02566 OsmC-like protein HKK60_RS16265 PF01965 DJ-1/PfpI family HKK60_RS16275 PF02082 Transcriptional regulator HKK60_RS16280 PF01458 Uncharacterized protein family (UPF0051) HKK60_RS16290 PF00005 ABC transporter HKK60_RS16295 PF01458 Uncharacterized protein family (UPF0051) HKK60_RS16300 PF00266 Aminotransferase class-V HKK60_RS16315 PF00355 Rieske [2Fe-2S] domain HKK60_RS16325 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS16325 PF00593 TonB dependent receptor HKK60_RS16335 PF13640 2OG-Fe(II) oxygenase superfamily HKK60_RS16335 PF18331 PKHD-type hydroxylase C-terminal domain HKK60_RS16345 PF00593 TonB dependent receptor HKK60_RS16345 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS16365 PF02424 ApbE family HKK60_RS16370 PF00258 Flavodoxin HKK60_RS16370 PF00667 FAD binding domain HKK60_RS16370 PF00175 Oxidoreductase NAD-binding domain HKK60_RS16400 PF04226 Transglycosylase associated protein HKK60_RS16405 PF01636 Phosphotransferase enzyme family HKK60_RS16410 PF00483 Nucleotidyl transferase HKK60_RS16415 PF00308 Bacterial dnaA protein HKK60_RS16420 PF01594 AI-2E family transporter HKK60_RS16430 PF00586 AIR synthase related protein, N-terminal domain HKK60_RS16430 PF02769 AIR synthase related protein, C-terminal domain HKK60_RS16450 PF00551 Formyl transferase HKK60_RS16470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKK60_RS16480 PF01380 SIS domain HKK60_RS16480 PF00571 CBS domain HKK60_RS16500 PF00005 ABC transporter HKK60_RS16500 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK60_RS16505 PF04552 Sigma-54, DNA binding domain HKK60_RS16505 PF00309 Sigma-54 factor, Activator interacting domain (AID) HKK60_RS16505 PF04963 Sigma-54 factor, core binding domain HKK60_RS16510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HKK60_RS16515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKK60_RS16520 PF02603 HPr Serine kinase N terminus HKK60_RS16520 PF07475 HPr Serine kinase C-terminal domain HKK60_RS16525 PF03668 P-loop ATPase protein family HKK60_RS16535 PF00381 PTS HPr component phosphorylation site HKK60_RS16540 PF02896 PEP-utilising enzyme, TIM barrel domain HKK60_RS16540 PF00391 PEP-utilising enzyme, mobile domain HKK60_RS16540 PF05524 PEP-utilising enzyme, N-terminal HKK60_RS16545 PF03448 MgtE intracellular N domain HKK60_RS16545 PF01769 Divalent cation transporter HKK60_RS16545 PF00571 CBS domain HKK60_RS16565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKK60_RS16565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKK60_RS16570 PF03652 Holliday junction resolvase HKK60_RS16575 PF02622 Uncharacterized ACR, COG1678 HKK60_RS16580 PF13687 Domain of unknown function (DUF4153) HKK60_RS16585 PF03352 Methyladenine glycosylase HKK60_RS16600 PF03466 LysR substrate binding domain HKK60_RS16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS16605 PF00248 Aldo/keto reductase family HKK60_RS16610 PF00437 Type II/IV secretion system protein HKK60_RS16615 PF00437 Type II/IV secretion system protein HKK60_RS16620 PF01168 Alanine racemase, N-terminal domain HKK60_RS16625 PF14748 Pyrroline-5-carboxylate reductase dimerisation HKK60_RS16625 PF03807 NADP oxidoreductase coenzyme F420-dependent HKK60_RS16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS16630 PF03466 LysR substrate binding domain HKK60_RS16640 PF00376 MerR family regulatory protein HKK60_RS16640 PF09278 MerR, DNA binding HKK60_RS16645 PF07690 Major Facilitator Superfamily HKK60_RS16665 PF07690 Major Facilitator Superfamily HKK60_RS16670 PF03466 LysR substrate binding domain HKK60_RS16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS16675 PF00892 EamA-like transporter family HKK60_RS16680 PF00155 Aminotransferase class I and II HKK60_RS16680 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS16685 PF03466 LysR substrate binding domain HKK60_RS16700 PF13599 Pentapeptide repeats (9 copies) HKK60_RS16705 PF00455 DeoR C terminal sensor domain HKK60_RS16705 PF08220 DeoR-like helix-turn-helix domain HKK60_RS16710 PF07690 Major Facilitator Superfamily HKK60_RS16720 PF00593 TonB dependent receptor HKK60_RS16720 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS16820 PF17482 Phage tail sheath C-terminal domain HKK60_RS16820 PF04984 Phage tail sheath protein subtilisin-like domain HKK60_RS16870 PF09115 DNA polymerase III, delta subunit, C terminal HKK60_RS16875 PF02223 Thymidylate kinase HKK60_RS16880 PF02618 YceG-like family HKK60_RS16885 PF04715 Anthranilate synthase component I, N terminal region HKK60_RS16885 PF00425 chorismate binding enzyme HKK60_RS16890 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK60_RS16890 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK60_RS16895 PF00550 Phosphopantetheine attachment site HKK60_RS16905 PF00698 Acyl transferase domain HKK60_RS16915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKK60_RS16915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKK60_RS16920 PF01783 Ribosomal L32p protein family HKK60_RS16925 PF02620 Large ribosomal RNA subunit accumulation protein YceD HKK60_RS16930 PF02545 Maf-like protein HKK60_RS16940 PF07726 ATPase family associated with various cellular activities (AAA) HKK60_RS16940 PF17863 AAA lid domain HKK60_RS16950 PF11992 Domain of unknown function (DUF3488) HKK60_RS16950 PF01841 Transglutaminase-like superfamily HKK60_RS16950 PF13559 Domain of unknown function (DUF4129) HKK60_RS16960 PF01230 HIT domain HKK60_RS16965 PF02132 RecR protein HKK60_RS16965 PF13662 Toprim domain HKK60_RS16970 PF02575 YbaB/EbfC DNA-binding family HKK60_RS16975 PF12170 DNA polymerase III tau subunit V interacting with alpha HKK60_RS16975 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HKK60_RS16975 PF12169 DNA polymerase III subunits gamma and tau domain III HKK60_RS16990 PF03389 MobA/MobL family HKK60_RS17090 PF00893 Small Multidrug Resistance protein HKK60_RS17105 PF12706 Beta-lactamase superfamily domain HKK60_RS17115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HKK60_RS17140 PF00929 Exonuclease HKK60_RS17145 PF00075 RNase H HKK60_RS17155 PF16123 Hydroxyacylglutathione hydrolase C-terminus HKK60_RS17155 PF00753 Metallo-beta-lactamase superfamily HKK60_RS17160 PF05257 CHAP domain HKK60_RS17160 PF01476 LysM domain HKK60_RS17165 PF05698 Bacterial trigger factor protein (TF) C-terminus HKK60_RS17190 PF00216 Bacterial DNA-binding protein HKK60_RS17195 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS17195 PF02190 ATP-dependent protease La (LON) substrate-binding domain HKK60_RS17195 PF05362 Lon protease (S16) C-terminal proteolytic domain HKK60_RS17200 PF06689 ClpX C4-type zinc finger HKK60_RS17200 PF10431 C-terminal, D2-small domain, of ClpB protein HKK60_RS17200 PF07724 AAA domain (Cdc48 subfamily) HKK60_RS17205 PF00574 Clp protease HKK60_RS17210 PF05697 Bacterial trigger factor protein (TF) HKK60_RS17210 PF05698 Bacterial trigger factor protein (TF) C-terminus HKK60_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS17265 PF03466 LysR substrate binding domain HKK60_RS17275 PF00180 Isocitrate/isopropylmalate dehydrogenase HKK60_RS17285 PF00462 Glutaredoxin HKK60_RS17290 PF07720 Tetratricopeptide repeat HKK60_RS17290 PF01435 Peptidase family M48 HKK60_RS17295 PF00072 Response regulator receiver domain HKK60_RS17295 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS17300 PF11808 Phosphate regulon sensor protein PhoR HKK60_RS17300 PF00989 PAS fold HKK60_RS17300 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS17300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS17305 PF02503 Polyphosphate kinase middle domain HKK60_RS17305 PF17941 Polyphosphate kinase C-terminal domain 1 HKK60_RS17305 PF13089 Polyphosphate kinase N-terminal domain HKK60_RS17305 PF13090 Polyphosphate kinase C-terminal domain 2 HKK60_RS17310 PF02541 Ppx/GppA phosphatase family HKK60_RS17320 PF00593 TonB dependent receptor HKK60_RS17320 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS17325 PF00534 Glycosyl transferases group 1 HKK60_RS17325 PF13439 Glycosyltransferase Family 4 HKK60_RS17330 PF01569 PAP2 superfamily HKK60_RS17335 PF00149 Calcineurin-like phosphoesterase HKK60_RS17350 PF04305 Protein of unknown function (DUF455) HKK60_RS17355 PF00156 Phosphoribosyl transferase domain HKK60_RS17370 PF08245 Mur ligase middle domain HKK60_RS17370 PF02875 Mur ligase family, glutamate ligase domain HKK60_RS17375 PF00300 Histidine phosphatase superfamily (branch 1) HKK60_RS17380 PF10459 Peptidase S46 HKK60_RS17385 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS17385 PF00107 Zinc-binding dehydrogenase HKK60_RS17395 PF00155 Aminotransferase class I and II HKK60_RS17405 PF01479 S4 domain HKK60_RS17405 PF00849 RNA pseudouridylate synthase HKK60_RS17415 PF00691 OmpA family HKK60_RS17415 PF05736 OprF membrane domain HKK60_RS17420 PF00107 Zinc-binding dehydrogenase HKK60_RS17420 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS17435 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HKK60_RS17435 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HKK60_RS17440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK60_RS17440 PF00205 Thiamine pyrophosphate enzyme, central domain HKK60_RS17440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK60_RS17450 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS17455 PF00682 HMGL-like HKK60_RS17455 PF08502 LeuA allosteric (dimerisation) domain HKK60_RS17465 PF00330 Aconitase family (aconitate hydratase) HKK60_RS17470 PF00694 Aconitase C-terminal domain HKK60_RS17475 PF00180 Isocitrate/isopropylmalate dehydrogenase HKK60_RS17485 PF03466 LysR substrate binding domain HKK60_RS17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS17490 PF00873 AcrB/AcrD/AcrF family HKK60_RS17495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS17510 PF02321 Outer membrane efflux protein HKK60_RS17515 PF13520 Amino acid permease HKK60_RS17520 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HKK60_RS17525 PF03279 Bacterial lipid A biosynthesis acyltransferase HKK60_RS17555 PF03949 Malic enzyme, NAD binding domain HKK60_RS17555 PF01515 Phosphate acetyl/butaryl transferase HKK60_RS17555 PF00390 Malic enzyme, N-terminal domain HKK60_RS17560 PF00375 Sodium:dicarboxylate symporter family HKK60_RS17570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS17570 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS17575 PF00072 Response regulator receiver domain HKK60_RS17575 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS17585 PF08521 Two-component sensor kinase N-terminal HKK60_RS17585 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS17590 PF00072 Response regulator receiver domain HKK60_RS17590 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS17600 PF03600 Citrate transporter HKK60_RS17605 PF00106 short chain dehydrogenase HKK60_RS17630 PF03193 RsgA GTPase HKK60_RS17635 PF00155 Aminotransferase class I and II HKK60_RS17650 PF01522 Polysaccharide deacetylase HKK60_RS17655 PF00462 Glutaredoxin HKK60_RS17670 PF01979 Amidohydrolase family HKK60_RS17675 PF00449 Urease alpha-subunit, N-terminal domain HKK60_RS17675 PF01979 Amidohydrolase family HKK60_RS17680 PF01323 DSBA-like thioredoxin domain HKK60_RS17685 PF02645 Uncharacterised protein, DegV family COG1307 HKK60_RS17695 PF02321 Outer membrane efflux protein HKK60_RS17700 PF13533 Biotin-lipoyl like HKK60_RS17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS17710 PF03466 LysR substrate binding domain HKK60_RS17725 PF00360 Phytochrome region HKK60_RS17725 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS17725 PF01590 GAF domain HKK60_RS17725 PF00563 EAL domain HKK60_RS17730 PF00756 Putative esterase HKK60_RS17740 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS17740 PF00107 Zinc-binding dehydrogenase HKK60_RS17745 PF02583 Metal-sensitive transcriptional repressor HKK60_RS17750 PF03466 LysR substrate binding domain HKK60_RS17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS17755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK60_RS17780 PF03466 LysR substrate binding domain HKK60_RS17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS17785 PF00107 Zinc-binding dehydrogenase HKK60_RS17785 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS17790 PF04107 Glutamate-cysteine ligase family 2(GCS2) HKK60_RS17800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKK60_RS17800 PF12833 Helix-turn-helix domain HKK60_RS17805 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HKK60_RS17805 PF00753 Metallo-beta-lactamase superfamily HKK60_RS17805 PF10996 Beta-Casp domain HKK60_RS17810 PF01926 50S ribosome-binding GTPase HKK60_RS17815 PF00034 Cytochrome c HKK60_RS17820 PF01323 DSBA-like thioredoxin domain HKK60_RS17825 PF01323 DSBA-like thioredoxin domain HKK60_RS17835 PF00892 EamA-like transporter family HKK60_RS17840 PF01037 Lrp/AsnC ligand binding domain HKK60_RS17850 PF00593 TonB dependent receptor HKK60_RS17850 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS17860 PF00593 TonB dependent receptor HKK60_RS17860 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS17870 PF02472 Biopolymer transport protein ExbD/TolR HKK60_RS17875 PF01464 Transglycosylase SLT domain HKK60_RS17875 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HKK60_RS17880 PF01966 HD domain HKK60_RS17880 PF01743 Poly A polymerase head domain HKK60_RS17880 PF12627 Probable RNA and SrmB- binding site of polymerase A HKK60_RS17915 PF13018 Extended Signal Peptide of Type V secretion system HKK60_RS17915 PF03797 Autotransporter beta-domain HKK60_RS17915 PF16168 Adhesin of bacterial autotransporter system, probable stalk HKK60_RS17925 PF01979 Amidohydrolase family HKK60_RS17930 PF01380 SIS domain HKK60_RS17935 PF00356 Bacterial regulatory proteins, lacI family HKK60_RS17940 PF07690 Major Facilitator Superfamily HKK60_RS17945 PF02685 Glucokinase HKK60_RS17955 PF00728 Glycosyl hydrolase family 20, catalytic domain HKK60_RS17955 PF07691 PA14 domain HKK60_RS17955 PF02838 Glycosyl hydrolase family 20, domain 2 HKK60_RS17975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKK60_RS17990 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS17995 PF00072 Response regulator receiver domain HKK60_RS18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS18000 PF08446 PAS fold HKK60_RS18000 PF00360 Phytochrome region HKK60_RS18000 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS18000 PF01590 GAF domain HKK60_RS18005 PF04972 BON domain HKK60_RS18010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK60_RS18010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK60_RS18015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HKK60_RS18015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKK60_RS18030 PF03572 Peptidase family S41 HKK60_RS18030 PF00595 PDZ domain HKK60_RS18030 PF11818 C-terminal domain of tail specific protease (DUF3340) HKK60_RS18030 PF17804 Tail specific protease N-terminal domain HKK60_RS18035 PF04055 Radical SAM superfamily HKK60_RS18035 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HKK60_RS18040 PF03099 Biotin/lipoate A/B protein ligase family HKK60_RS18045 PF04359 Protein of unknown function (DUF493) HKK60_RS18055 PF07943 Penicillin-binding protein 5, C-terminal domain HKK60_RS18055 PF00768 D-alanyl-D-alanine carboxypeptidase HKK60_RS18060 PF05036 Sporulation related domain HKK60_RS18060 PF03330 Lytic transglycolase HKK60_RS18065 PF13406 Transglycosylase SLT domain HKK60_RS18070 PF01098 Cell cycle protein HKK60_RS18075 PF01098 Cell cycle protein HKK60_RS18080 PF00905 Penicillin binding protein transpeptidase domain HKK60_RS18080 PF03717 Penicillin-binding Protein dimerisation domain HKK60_RS18090 PF04085 rod shape-determining protein MreC HKK60_RS18100 PF00294 pfkB family carbohydrate kinase HKK60_RS18115 PF11838 ERAP1-like C-terminal domain HKK60_RS18115 PF01433 Peptidase family M1 domain HKK60_RS18120 PF01209 ubiE/COQ5 methyltransferase family HKK60_RS18145 PF02321 Outer membrane efflux protein HKK60_RS18150 PF00873 AcrB/AcrD/AcrF family HKK60_RS18155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS18155 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS18160 PF00440 Bacterial regulatory proteins, tetR family HKK60_RS18160 PF08361 MAATS-type transcriptional repressor, C-terminal region HKK60_RS18165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK60_RS18165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK60_RS18170 PF10431 C-terminal, D2-small domain, of ClpB protein HKK60_RS18170 PF00004 ATPase family associated with various cellular activities (AAA) HKK60_RS18170 PF07724 AAA domain (Cdc48 subfamily) HKK60_RS18175 PF00227 Proteasome subunit HKK60_RS18180 PF02899 Phage integrase, N-terminal SAM-like domain HKK60_RS18180 PF00589 Phage integrase family HKK60_RS18190 PF01678 Diaminopimelate epimerase HKK60_RS18200 PF04304 Protein of unknown function (DUF454) HKK60_RS18205 PF00326 Prolyl oligopeptidase family HKK60_RS18205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HKK60_RS18210 PF00155 Aminotransferase class I and II HKK60_RS18215 PF00326 Prolyl oligopeptidase family HKK60_RS18215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HKK60_RS18230 PF00528 Binding-protein-dependent transport system inner membrane component HKK60_RS18235 PF09383 NIL domain HKK60_RS18235 PF00005 ABC transporter HKK60_RS18240 PF00892 EamA-like transporter family HKK60_RS18245 PF04461 Protein of unknown function (DUF520) HKK60_RS18260 PF01432 Peptidase family M3 HKK60_RS18270 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS18275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK60_RS18295 PF01380 SIS domain HKK60_RS18300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS18305 PF00005 ABC transporter HKK60_RS18310 PF00005 ABC transporter HKK60_RS18310 PF02687 FtsX-like permease family HKK60_RS18310 PF12704 MacB-like periplasmic core domain HKK60_RS18315 PF02687 FtsX-like permease family HKK60_RS18315 PF12704 MacB-like periplasmic core domain HKK60_RS18325 PF00072 Response regulator receiver domain HKK60_RS18325 PF00158 Sigma-54 interaction domain HKK60_RS18325 PF02954 Bacterial regulatory protein, Fis family HKK60_RS18330 PF00989 PAS fold HKK60_RS18330 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS18340 PF12804 MobA-like NTP transferase domain HKK60_RS18340 PF00132 Bacterial transferase hexapeptide (six repeats) HKK60_RS18340 PF14602 Hexapeptide repeat of succinyl-transferase HKK60_RS18350 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HKK60_RS18350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HKK60_RS18355 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKK60_RS18355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK60_RS18360 PF00231 ATP synthase HKK60_RS18365 PF00306 ATP synthase alpha/beta chain, C terminal domain HKK60_RS18365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK60_RS18365 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKK60_RS18370 PF00213 ATP synthase delta (OSCP) subunit HKK60_RS18375 PF00430 ATP synthase B/B' CF(0) HKK60_RS18380 PF00137 ATP synthase subunit C HKK60_RS18385 PF00119 ATP synthase A chain HKK60_RS18400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK60_RS18400 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS18405 PF00364 Biotin-requiring enzyme HKK60_RS18405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKK60_RS18405 PF02817 e3 binding domain HKK60_RS18420 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HKK60_RS18420 PF01266 FAD dependent oxidoreductase HKK60_RS18425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKK60_RS18425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKK60_RS18430 PF03180 NLPA lipoprotein HKK60_RS18450 PF03900 Porphobilinogen deaminase, C-terminal domain HKK60_RS18450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HKK60_RS18455 PF04397 LytTr DNA-binding domain HKK60_RS18455 PF00072 Response regulator receiver domain HKK60_RS18460 PF06580 Histidine kinase HKK60_RS18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS18465 PF02230 Phospholipase/Carboxylesterase HKK60_RS18470 PF13632 Glycosyl transferase family group 2 HKK60_RS18475 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS18475 PF00593 TonB dependent receptor HKK60_RS18485 PF10947 Protein of unknown function (DUF2628) HKK60_RS18510 PF07690 Major Facilitator Superfamily HKK60_RS18530 PF00082 Subtilase family HKK60_RS18530 PF12951 Passenger-associated-transport-repeat HKK60_RS18530 PF03797 Autotransporter beta-domain HKK60_RS18555 PF00593 TonB dependent receptor HKK60_RS18555 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS18585 PF07681 DoxX HKK60_RS18630 PF00140 Sigma-70 factor, region 1.2 HKK60_RS18630 PF04542 Sigma-70 region 2 HKK60_RS18630 PF04539 Sigma-70 region 3 HKK60_RS18630 PF04545 Sigma-70, region 4 HKK60_RS18630 PF04546 Sigma-70, non-essential region HKK60_RS18630 PF03979 Sigma-70 factor, region 1.1 HKK60_RS18635 PF02580 D-Tyr-tRNA(Tyr) deacylase HKK60_RS18645 PF00925 GTP cyclohydrolase II HKK60_RS18665 PF00535 Glycosyl transferase family 2 HKK60_RS18670 PF13439 Glycosyltransferase Family 4 HKK60_RS18670 PF00534 Glycosyl transferases group 1 HKK60_RS18680 PF01029 NusB family HKK60_RS18680 PF01189 16S rRNA methyltransferase RsmB/F HKK60_RS18685 PF00551 Formyl transferase HKK60_RS18685 PF02911 Formyl transferase, C-terminal domain HKK60_RS18690 PF01327 Polypeptide deformylase HKK60_RS18700 PF17782 DprA winged helix domain HKK60_RS18700 PF02481 DNA recombination-mediator protein A HKK60_RS18705 PF04361 Protein of unknown function (DUF494) HKK60_RS18710 PF00114 Pilin (bacterial filament) HKK60_RS18710 PF07963 Prokaryotic N-terminal methylation motif HKK60_RS18715 PF06271 RDD family HKK60_RS18720 PF13368 Topoisomerase C-terminal repeat HKK60_RS18720 PF01751 Toprim domain HKK60_RS18720 PF01131 DNA topoisomerase HKK60_RS18725 PF01300 Telomere recombination HKK60_RS18750 PF01343 Peptidase family S49 HKK60_RS18755 PF01554 MatE HKK60_RS18770 PF00271 Helicase conserved C-terminal domain HKK60_RS18770 PF18074 Primosomal protein N C-terminal domain HKK60_RS18770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HKK60_RS18770 PF00270 DEAD/DEAH box helicase HKK60_RS18770 PF17764 3′ DNA-binding domain (3′BD) HKK60_RS18775 PF13417 Glutathione S-transferase, N-terminal domain HKK60_RS18775 PF00043 Glutathione S-transferase, C-terminal domain HKK60_RS18785 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK60_RS18800 PF01541 GIY-YIG catalytic domain HKK60_RS18805 PF03458 UPF0126 domain HKK60_RS18810 PF00793 DAHP synthetase I family HKK60_RS18830 PF01047 MarR family HKK60_RS18835 PF00672 HAMP domain HKK60_RS18835 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS18835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS18840 PF00072 Response regulator receiver domain HKK60_RS18840 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS18860 PF00118 TCP-1/cpn60 chaperonin family HKK60_RS18865 PF00166 Chaperonin 10 Kd subunit HKK60_RS18870 PF04231 Endonuclease I HKK60_RS18875 PF03091 CutA1 divalent ion tolerance protein HKK60_RS18880 PF02683 Cytochrome C biogenesis protein transmembrane region HKK60_RS18880 PF11412 Disulphide bond corrector protein DsbC HKK60_RS18885 PF08534 Redoxin HKK60_RS18890 PF00258 Flavodoxin HKK60_RS18890 PF00175 Oxidoreductase NAD-binding domain HKK60_RS18890 PF00667 FAD binding domain HKK60_RS18895 PF02203 Tar ligand binding domain homologue HKK60_RS18895 PF00672 HAMP domain HKK60_RS18895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS18900 PF00797 N-acetyltransferase HKK60_RS18910 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS18910 PF00072 Response regulator receiver domain HKK60_RS18915 PF07730 Histidine kinase HKK60_RS18925 PF03055 Retinal pigment epithelial membrane protein HKK60_RS18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS18935 PF03466 LysR substrate binding domain HKK60_RS18950 PF00245 Alkaline phosphatase HKK60_RS18955 PF00768 D-alanyl-D-alanine carboxypeptidase HKK60_RS18955 PF07943 Penicillin-binding protein 5, C-terminal domain HKK60_RS18965 PF02525 Flavodoxin-like fold HKK60_RS18985 PF01220 Dehydroquinase class II HKK60_RS18990 PF00364 Biotin-requiring enzyme HKK60_RS18995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK60_RS18995 PF00289 Biotin carboxylase, N-terminal domain HKK60_RS18995 PF02785 Biotin carboxylase C-terminal domain HKK60_RS19020 PF02954 Bacterial regulatory protein, Fis family HKK60_RS19030 PF01553 Acyltransferase HKK60_RS19040 PF00782 Dual specificity phosphatase, catalytic domain HKK60_RS19045 PF12147 Putative methyltransferase HKK60_RS19045 PF12146 Serine aminopeptidase, S33 HKK60_RS19050 PF01066 CDP-alcohol phosphatidyltransferase HKK60_RS19055 PF01808 AICARFT/IMPCHase bienzyme HKK60_RS19055 PF02142 MGS-like domain HKK60_RS19060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HKK60_RS19060 PF02843 Phosphoribosylglycinamide synthetase, C domain HKK60_RS19060 PF02844 Phosphoribosylglycinamide synthetase, N domain HKK60_RS19075 PF00140 Sigma-70 factor, region 1.2 HKK60_RS19075 PF04542 Sigma-70 region 2 HKK60_RS19075 PF04545 Sigma-70, region 4 HKK60_RS19080 PF03167 Uracil DNA glycosylase superfamily HKK60_RS19085 PF00072 Response regulator receiver domain HKK60_RS19085 PF01339 CheB methylesterase HKK60_RS19090 PF18075 FtsX extracellular domain HKK60_RS19095 PF00005 ABC transporter HKK60_RS19100 PF00271 Helicase conserved C-terminal domain HKK60_RS19100 PF12300 ATP-dependent RNA helicase RhlB HKK60_RS19100 PF00270 DEAD/DEAH box helicase HKK60_RS19105 PF00085 Thioredoxin HKK60_RS19110 PF07498 Rho termination factor, N-terminal domain HKK60_RS19110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK60_RS19110 PF07497 Rho termination factor, RNA-binding domain HKK60_RS19115 PF07694 5TMR of 5TMR-LYT HKK60_RS19115 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS19125 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HKK60_RS19150 PF03971 Monomeric isocitrate dehydrogenase HKK60_RS19160 PF04972 BON domain HKK60_RS19160 PF01476 LysM domain HKK60_RS19165 PF14489 QueF-like protein HKK60_RS19165 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HKK60_RS19170 PF01546 Peptidase family M20/M25/M40 HKK60_RS19170 PF07687 Peptidase dimerisation domain HKK60_RS19175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS19180 PF00873 AcrB/AcrD/AcrF family HKK60_RS19185 PF00873 AcrB/AcrD/AcrF family HKK60_RS19190 PF12805 FUSC-like inner membrane protein yccS HKK60_RS19195 PF00106 short chain dehydrogenase HKK60_RS19200 PF07690 Major Facilitator Superfamily HKK60_RS19225 PF09297 NADH pyrophosphatase zinc ribbon domain HKK60_RS19225 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HKK60_RS19225 PF00293 NUDIX domain HKK60_RS19230 PF01521 Iron-sulphur cluster biosynthesis HKK60_RS19250 PF00072 Response regulator receiver domain HKK60_RS19250 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS19250 PF00563 EAL domain HKK60_RS19255 PF00072 Response regulator receiver domain HKK60_RS19255 PF01627 Hpt domain HKK60_RS19255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKK60_RS19255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS19255 PF00672 HAMP domain HKK60_RS19255 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS19260 PF00210 Ferritin-like domain HKK60_RS19270 PF00293 NUDIX domain HKK60_RS19285 PF00380 Ribosomal protein S9/S16 HKK60_RS19290 PF00572 Ribosomal protein L13 HKK60_RS19295 PF03232 Ubiquinone biosynthesis protein COQ7 HKK60_RS19300 PF00893 Small Multidrug Resistance protein HKK60_RS19305 PF02675 S-adenosylmethionine decarboxylase HKK60_RS19310 PF00027 Cyclic nucleotide-binding domain HKK60_RS19310 PF00325 Bacterial regulatory proteins, crp family HKK60_RS19315 PF01925 Sulfite exporter TauE/SafE HKK60_RS19325 PF00218 Indole-3-glycerol phosphate synthase HKK60_RS19330 PF02885 Glycosyl transferase family, helical bundle domain HKK60_RS19330 PF00591 Glycosyl transferase family, a/b domain HKK60_RS19335 PF00117 Glutamine amidotransferase class-I HKK60_RS19345 PF04715 Anthranilate synthase component I, N terminal region HKK60_RS19345 PF00425 chorismate binding enzyme HKK60_RS19350 PF00781 Diacylglycerol kinase catalytic domain HKK60_RS19360 PF00834 Ribulose-phosphate 3 epimerase family HKK60_RS19365 PF00226 DnaJ domain HKK60_RS19365 PF05099 Tellurite resistance protein TerB HKK60_RS19370 PF01259 SAICAR synthetase HKK60_RS19380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKK60_RS19380 PF00361 Proton-conducting membrane transporter HKK60_RS19380 PF13244 Domain of unknown function (DUF4040) HKK60_RS19380 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HKK60_RS19385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKK60_RS19390 PF00361 Proton-conducting membrane transporter HKK60_RS19395 PF01899 Na+/H+ ion antiporter subunit HKK60_RS19400 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HKK60_RS19405 PF03334 Na+/H+ antiporter subunit HKK60_RS19410 PF01699 Sodium/calcium exchanger protein HKK60_RS19425 PF04209 homogentisate 1,2-dioxygenase HKK60_RS19430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK60_RS19435 PF01047 MarR family HKK60_RS19450 PF00854 POT family HKK60_RS19455 PF03301 Tryptophan 2,3-dioxygenase HKK60_RS19460 PF00676 Dehydrogenase E1 component HKK60_RS19465 PF02779 Transketolase, pyrimidine binding domain HKK60_RS19465 PF02780 Transketolase, C-terminal domain HKK60_RS19475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKK60_RS19475 PF00364 Biotin-requiring enzyme HKK60_RS19475 PF02817 e3 binding domain HKK60_RS19485 PF08279 HTH domain HKK60_RS19485 PF13280 WYL domain HKK60_RS19495 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS19495 PF00563 EAL domain HKK60_RS19495 PF03707 Bacterial signalling protein N terminal repeat HKK60_RS19500 PF05661 Protein of unknown function (DUF808) HKK60_RS19505 PF03109 ABC1 family HKK60_RS19510 PF00884 Sulfatase HKK60_RS19515 PF12795 Mechanosensitive ion channel porin domain HKK60_RS19515 PF00924 Mechanosensitive ion channel HKK60_RS19515 PF12794 Mechanosensitive ion channel inner membrane domain 1 HKK60_RS19530 PF01266 FAD dependent oxidoreductase HKK60_RS19530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HKK60_RS19550 PF00072 Response regulator receiver domain HKK60_RS19550 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS19565 PF17944 Arginine decarboxylase C-terminal helical extension HKK60_RS19565 PF17810 Arginine decarboxylase helical bundle domain HKK60_RS19565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKK60_RS19570 PF17284 Spermidine synthase tetramerisation domain HKK60_RS19590 PF00543 Nitrogen regulatory protein P-II HKK60_RS19595 PF04380 Membrane fusogenic activity HKK60_RS19605 PF04380 Membrane fusogenic activity HKK60_RS19655 PF01078 Magnesium chelatase, subunit ChlI HKK60_RS19655 PF13335 Magnesium chelatase, subunit ChlI C-terminal HKK60_RS19685 PF06055 Exopolysaccharide synthesis, ExoD HKK60_RS19695 PF07995 Glucose / Sorbosone dehydrogenase HKK60_RS19705 PF00082 Subtilase family HKK60_RS19705 PF01483 Proprotein convertase P-domain HKK60_RS19715 PF02630 SCO1/SenC HKK60_RS19720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HKK60_RS19725 PF00510 Cytochrome c oxidase subunit III HKK60_RS19730 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK60_RS19735 PF06481 COX Aromatic Rich Motif HKK60_RS19735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKK60_RS19740 PF00155 Aminotransferase class I and II HKK60_RS19740 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS19755 PF00155 Aminotransferase class I and II HKK60_RS19755 PF00392 Bacterial regulatory proteins, gntR family HKK60_RS19760 PF00266 Aminotransferase class-V HKK60_RS19815 PF02667 Short chain fatty acid transporter HKK60_RS19820 PF01040 UbiA prenyltransferase family HKK60_RS19850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK60_RS19855 PF00593 TonB dependent receptor HKK60_RS19855 PF07715 TonB-dependent Receptor Plug Domain HKK60_RS19860 PF16338 Domain of unknown function (DUF4968) HKK60_RS19860 PF17137 Domain of unknown function (DUF5110) HKK60_RS19860 PF01055 Glycosyl hydrolases family 31 HKK60_RS19865 PF01380 SIS domain HKK60_RS19870 PF00480 ROK family HKK60_RS19875 PF08013 Tagatose 6 phosphate kinase HKK60_RS19880 PF08220 DeoR-like helix-turn-helix domain HKK60_RS19880 PF00455 DeoR C terminal sensor domain HKK60_RS19885 PF01979 Amidohydrolase family HKK60_RS19890 PF00083 Sugar (and other) transporter HKK60_RS19905 PF00156 Phosphoribosyl transferase domain HKK60_RS19920 PF00654 Voltage gated chloride channel HKK60_RS19925 PF04055 Radical SAM superfamily HKK60_RS19925 PF06968 Biotin and Thiamin Synthesis associated domain HKK60_RS19930 PF00155 Aminotransferase class I and II HKK60_RS19935 PF12697 Alpha/beta hydrolase family HKK60_RS19945 PF13649 Methyltransferase domain HKK60_RS19955 PF00291 Pyridoxal-phosphate dependent enzyme HKK60_RS19965 PF13932 GidA associated domain HKK60_RS19965 PF01134 Glucose inhibited division protein A HKK60_RS19970 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HKK60_RS19970 PF02321 Outer membrane efflux protein HKK60_RS19975 PF00873 AcrB/AcrD/AcrF family HKK60_RS19980 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS19980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS19985 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS19985 PF00672 HAMP domain HKK60_RS19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS19990 PF00072 Response regulator receiver domain HKK60_RS19990 PF00486 Transcriptional regulatory protein, C terminal HKK60_RS19995 PF10127 RNA repair pathway DNA polymerase beta family HKK60_RS20000 PF00132 Bacterial transferase hexapeptide (six repeats) HKK60_RS20025 PF17863 AAA lid domain HKK60_RS20025 PF07726 ATPase family associated with various cellular activities (AAA) HKK60_RS20040 PF03738 Glutathionylspermidine synthase preATP-grasp HKK60_RS20050 PF00920 Dehydratase family HKK60_RS20055 PF04235 Protein of unknown function (DUF418) HKK60_RS20060 PF06733 DEAD_2 HKK60_RS20060 PF13307 Helicase C-terminal domain HKK60_RS20070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HKK60_RS20070 PF01488 Shikimate / quinate 5-dehydrogenase HKK60_RS20070 PF08501 Shikimate dehydrogenase substrate binding domain HKK60_RS20085 PF00490 Delta-aminolevulinic acid dehydratase HKK60_RS20090 PF01062 Bestrophin, RFP-TM, chloride channel HKK60_RS20115 PF00326 Prolyl oligopeptidase family HKK60_RS20115 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HKK60_RS20120 PF02798 Glutathione S-transferase, N-terminal domain HKK60_RS20120 PF00043 Glutathione S-transferase, C-terminal domain HKK60_RS20125 PF03350 Uncharacterized protein family, UPF0114 HKK60_RS20140 PF02311 AraC-like ligand binding domain HKK60_RS20140 PF12833 Helix-turn-helix domain HKK60_RS20155 PF00005 ABC transporter HKK60_RS20160 PF00561 alpha/beta hydrolase fold HKK60_RS20175 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HKK60_RS20175 PF18416 N-acetylglucosamine binding protein domain 2 HKK60_RS20180 PF18416 N-acetylglucosamine binding protein domain 2 HKK60_RS20180 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HKK60_RS20185 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK60_RS20185 PF00175 Oxidoreductase NAD-binding domain HKK60_RS20185 PF00970 Oxidoreductase FAD-binding domain HKK60_RS20190 PF00005 ABC transporter HKK60_RS20195 PF01061 ABC-2 type transporter HKK60_RS20205 PF08546 Ketopantoate reductase PanE/ApbA C terminal HKK60_RS20205 PF02558 Ketopantoate reductase PanE/ApbA HKK60_RS20215 PF01026 TatD related DNase HKK60_RS20220 PF00270 DEAD/DEAH box helicase HKK60_RS20220 PF04408 Helicase associated domain (HA2) HKK60_RS20220 PF00271 Helicase conserved C-terminal domain HKK60_RS20220 PF08482 ATP-dependent helicase C-terminal HKK60_RS20230 PF00849 RNA pseudouridylate synthase HKK60_RS20245 PF00248 Aldo/keto reductase family HKK60_RS20260 PF01139 tRNA-splicing ligase RtcB HKK60_RS20275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS20275 PF02203 Tar ligand binding domain homologue HKK60_RS20275 PF00672 HAMP domain HKK60_RS20280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS20280 PF03466 LysR substrate binding domain HKK60_RS20285 PF07690 Major Facilitator Superfamily HKK60_RS20290 PF00248 Aldo/keto reductase family HKK60_RS20295 PF00561 alpha/beta hydrolase fold HKK60_RS20300 PF01906 Putative heavy-metal-binding HKK60_RS20305 PF00583 Acetyltransferase (GNAT) family HKK60_RS20305 PF13607 Succinyl-CoA ligase like flavodoxin domain HKK60_RS20305 PF13380 CoA binding domain HKK60_RS20310 PF03448 MgtE intracellular N domain HKK60_RS20310 PF00571 CBS domain HKK60_RS20310 PF01769 Divalent cation transporter HKK60_RS20315 PF00999 Sodium/hydrogen exchanger family HKK60_RS20315 PF02254 TrkA-N domain HKK60_RS20320 PF02661 Fic/DOC family HKK60_RS20320 PF12796 Ankyrin repeats (3 copies) HKK60_RS20325 PF05166 YcgL domain HKK60_RS20335 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK60_RS20335 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK60_RS20350 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK60_RS20350 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK60_RS20360 PF01494 FAD binding domain HKK60_RS20380 PF00221 Aromatic amino acid lyase HKK60_RS20390 PF00535 Glycosyl transferase family 2 HKK60_RS20405 PF00550 Phosphopantetheine attachment site HKK60_RS20410 PF00550 Phosphopantetheine attachment site HKK60_RS20425 PF02322 Cytochrome bd terminal oxidase subunit II HKK60_RS20430 PF01654 Cytochrome bd terminal oxidase subunit I HKK60_RS20450 PF08281 Sigma-70, region 4 HKK60_RS20450 PF04542 Sigma-70 region 2 HKK60_RS20465 PF00293 NUDIX domain HKK60_RS20465 PF13344 Haloacid dehalogenase-like hydrolase HKK60_RS20485 PF01218 Coproporphyrinogen III oxidase HKK60_RS20495 PF04239 Protein of unknown function (DUF421) HKK60_RS20500 PF00476 DNA polymerase family A HKK60_RS20500 PF01367 5'-3' exonuclease, C-terminal SAM fold HKK60_RS20500 PF01612 3'-5' exonuclease HKK60_RS20500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HKK60_RS20510 PF00582 Universal stress protein family HKK60_RS20525 PF00580 UvrD/REP helicase N-terminal domain HKK60_RS20525 PF13361 UvrD-like helicase C-terminal domain HKK60_RS20535 PF13091 PLD-like domain HKK60_RS20535 PF13396 Phospholipase_D-nuclease N-terminal HKK60_RS20545 PF00471 Ribosomal protein L33 HKK60_RS20550 PF00830 Ribosomal L28 family HKK60_RS20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS20565 PF03466 LysR substrate binding domain HKK60_RS20570 PF01042 Endoribonuclease L-PSP HKK60_RS20580 PF02321 Outer membrane efflux protein HKK60_RS20585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS20590 PF00873 AcrB/AcrD/AcrF family HKK60_RS20605 PF00535 Glycosyl transferase family 2 HKK60_RS20610 PF01370 NAD dependent epimerase/dehydratase family HKK60_RS20620 PF02195 ParB-like nuclease domain HKK60_RS20620 PF17762 HTH domain found in ParB protein HKK60_RS20625 PF13614 AAA domain HKK60_RS20630 PF02527 rRNA small subunit methyltransferase G HKK60_RS20635 PF01648 4'-phosphopantetheinyl transferase superfamily HKK60_RS20640 PF04226 Transglycosylase associated protein HKK60_RS20650 PF00171 Aldehyde dehydrogenase family HKK60_RS20655 PF00083 Sugar (and other) transporter HKK60_RS20655 PF08946 Osmosensory transporter coiled coil HKK60_RS20665 PF16177 Acetyl-coenzyme A synthetase N-terminus HKK60_RS20665 PF13193 AMP-binding enzyme C-terminal domain HKK60_RS20665 PF00501 AMP-binding enzyme HKK60_RS20670 PF00072 Response regulator receiver domain HKK60_RS20670 PF00196 Bacterial regulatory proteins, luxR family HKK60_RS20675 PF02659 Putative manganese efflux pump HKK60_RS20680 PF00072 Response regulator receiver domain HKK60_RS20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK60_RS20680 PF00512 His Kinase A (phospho-acceptor) domain HKK60_RS20680 PF09456 RcsC Alpha-Beta-Loop (ABL) HKK60_RS20685 PF10459 Peptidase S46 HKK60_RS20690 PF04357 TamB, inner membrane protein subunit of TAM complex HKK60_RS20695 PF01103 Surface antigen HKK60_RS20695 PF07244 Surface antigen variable number repeat HKK60_RS20695 PF17243 POTRA domain TamA domain 1 HKK60_RS20700 PF05746 DALR anticodon binding domain HKK60_RS20700 PF02092 Glycyl-tRNA synthetase beta subunit HKK60_RS20705 PF02091 Glycyl-tRNA synthetase alpha subunit HKK60_RS20710 PF00437 Type II/IV secretion system protein HKK60_RS20715 PF00958 GMP synthase C terminal domain HKK60_RS20715 PF00117 Glutamine amidotransferase class-I HKK60_RS20725 PF00902 Sec-independent protein translocase protein (TatC) HKK60_RS20730 PF02416 mttA/Hcf106 family HKK60_RS20735 PF02416 mttA/Hcf106 family HKK60_RS20745 PF00762 Ferrochelatase HKK60_RS20755 PF00672 HAMP domain HKK60_RS20755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK60_RS20755 PF02203 Tar ligand binding domain homologue HKK60_RS20785 PF03594 Benzoate membrane transport protein HKK60_RS20795 PF01263 Aldose 1-epimerase HKK60_RS20800 PF13406 Transglycosylase SLT domain HKK60_RS20805 PF10017 Histidine-specific methyltransferase, SAM-dependent HKK60_RS20810 PF12867 DinB superfamily HKK60_RS20810 PF03781 Sulfatase-modifying factor enzyme 1 HKK60_RS20815 PF00990 Diguanylate cyclase, GGDEF domain HKK60_RS20820 PF02810 SEC-C motif HKK60_RS20825 PF01925 Sulfite exporter TauE/SafE HKK60_RS20845 PF01227 GTP cyclohydrolase I HKK60_RS20855 PF07869 Protein of unknown function (DUF1656) HKK60_RS20860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK60_RS20860 PF00529 HlyD membrane-fusion protein of T1SS HKK60_RS20865 PF02321 Outer membrane efflux protein HKK60_RS20870 PF04632 Fusaric acid resistance protein family HKK60_RS20880 PF13538 UvrD-like helicase C-terminal domain HKK60_RS20885 PF00580 UvrD/REP helicase N-terminal domain HKK60_RS20885 PF12705 PD-(D/E)XK nuclease superfamily HKK60_RS20885 PF13361 UvrD-like helicase C-terminal domain HKK60_RS20890 PF17946 RecC C-terminal domain HKK60_RS20895 PF00005 ABC transporter HKK60_RS20900 PF02405 Permease MlaE HKK60_RS20905 PF02470 MlaD protein HKK60_RS20920 PF04333 MlaA lipoprotein HKK60_RS20925 PF00255 Glutathione peroxidase HKK60_RS20935 PF02646 RmuC family HKK60_RS20940 PF13417 Glutathione S-transferase, N-terminal domain HKK60_RS20940 PF00043 Glutathione S-transferase, C-terminal domain HKK60_RS20945 PF00107 Zinc-binding dehydrogenase HKK60_RS20945 PF08240 Alcohol dehydrogenase GroES-like domain HKK60_RS20950 PF03466 LysR substrate binding domain HKK60_RS20950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK60_RS20955 PF01810 LysE type translocator HKK60_RS20970 PF13520 Amino acid permease HKK60_RS20980 PF10672 S-adenosylmethionine-dependent methyltransferase HKK60_RS20980 PF17785 PUA-like domain HKK60_RS20985 PF03741 Integral membrane protein TerC family HKK60_RS20990 PF01694 Rhomboid family HKK60_RS20995 PF03009 Glycerophosphoryl diester phosphodiesterase family HKK60_RS21000 PF12631 MnmE helical domain HKK60_RS21000 PF10396 GTP-binding protein TrmE N-terminus HKK60_RS21000 PF01926 50S ribosome-binding GTPase HKK60_RS21010 PF02096 60Kd inner membrane protein HKK60_RS21010 PF14849 YidC periplasmic domain HKK60_RS21015 PF00825 Ribonuclease P HKK60_RS21020 PF00468 Ribosomal protein L34