SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 Gene3D G3DSA:3.40.190.10 90 176 2.3E-18 T 25-04-2016 SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 Gene3D G3DSA:3.40.190.10 177 269 1.3E-20 T 25-04-2016 SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 Gene3D G3DSA:1.10.10.10 3 89 6.8E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 PANTHER PTHR30419 1 291 5.8E-91 T 25-04-2016 SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 Pfam PF03466 LysR substrate binding domain 89 291 9.5E-33 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 SUPERFAMILY SSF46785 1 113 2.88E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.4E-14 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 PANTHER PTHR30419:SF2 1 291 5.8E-91 T 25-04-2016 SMD_RS07145 f23d4b78e6e99c9ebcbc6a512ed2fed7 299 SUPERFAMILY SSF53850 89 294 1.07E-34 T 25-04-2016 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 SUPERFAMILY SSF55347 156 338 1.18E-42 T 25-04-2016 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 SUPERFAMILY SSF51735 15 178 1.85E-20 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 PANTHER PTHR21499 85 354 1.2E-65 T 25-04-2016 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 PIRSF PIRSF036497 13 355 2.7E-77 T 25-04-2016 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 PANTHER PTHR21499:SF29 85 354 1.2E-65 T 25-04-2016 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 202 224 - T 25-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 20 143 1.1E-8 T 25-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 Gene3D G3DSA:3.40.50.720 16 177 3.1E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 Pfam PF00742 Homoserine dehydrogenase 156 351 3.8E-44 T 25-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS16590 b9b2396f560f44e3340d28c9648b3d29 355 Gene3D G3DSA:3.30.360.10 178 333 1.1E-48 T 25-04-2016 SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 PANTHER PTHR24220 2 227 1.9E-104 T 25-04-2016 SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 SMART SM00382 25 206 1.6E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 Pfam PF00005 ABC transporter 16 160 3.6E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 Gene3D G3DSA:3.40.50.300 2 232 1.6E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 SUPERFAMILY SSF52540 3 221 1.33E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07455 55bc5e9a9659d1faa68b617d19a89225 307 PANTHER PTHR24220:SF0 2 227 1.9E-104 T 25-04-2016 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 365 510 5.0E-16 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 Gene3D G3DSA:1.10.540.10 102 238 1.1E-31 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 SUPERFAMILY SSF56645 124 360 6.68E-44 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 142 237 1.0E-18 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 PANTHER PTHR10909:SF321 54 536 2.4E-263 T 25-04-2016 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 PANTHER PTHR10909 54 536 2.4E-263 T 25-04-2016 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 SUPERFAMILY SSF47203 365 511 1.51E-24 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 Pfam PF09317 Domain of unknown function (DUF1974) 519 802 9.6E-110 T 25-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 Gene3D G3DSA:1.20.140.10 352 512 1.8E-26 T 25-04-2016 SMD_RS16665 29d2f8b60d30d9ae9d3e5c6cc169b2cf 825 Gene3D G3DSA:2.40.110.10 242 351 3.9E-13 T 25-04-2016 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Gene3D G3DSA:2.40.30.10 302 395 6.1E-46 T 25-04-2016 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 SUPERFAMILY SSF52540 5 221 1.89E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Gene3D G3DSA:3.40.50.300 5 213 2.6E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.031 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 SUPERFAMILY SSF50465 300 395 1.7E-35 T 25-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.4E-225 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Gene3D G3DSA:2.40.30.10 214 300 5.9E-38 T 25-04-2016 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 SUPERFAMILY SSF50447 207 303 1.14E-31 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 2.3E-14 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.6E-33 T 25-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.3E-55 T 25-04-2016 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PANTHER PTHR23115 1 395 2.3E-257 T 25-04-2016 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.8E-19 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 PANTHER PTHR23115:SF151 1 395 2.3E-257 T 25-04-2016 SMD_RS04095 22713dde8246f5b6f67cef098253117e 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Gene3D G3DSA:2.40.30.10 302 395 6.1E-46 T 25-04-2016 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 SUPERFAMILY SSF52540 5 221 1.89E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Gene3D G3DSA:3.40.50.300 5 213 2.6E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.031 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 SUPERFAMILY SSF50465 300 395 1.7E-35 T 25-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.4E-225 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Gene3D G3DSA:2.40.30.10 214 300 5.9E-38 T 25-04-2016 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 SUPERFAMILY SSF50447 207 303 1.14E-31 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 2.3E-14 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.6E-33 T 25-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.3E-55 T 25-04-2016 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PANTHER PTHR23115 1 395 2.3E-257 T 25-04-2016 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.8E-19 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 PANTHER PTHR23115:SF151 1 395 2.3E-257 T 25-04-2016 SMD_RS04160 22713dde8246f5b6f67cef098253117e 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 536 5.4E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Gene3D G3DSA:3.30.450.20 424 476 1.8E-6 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Gene3D G3DSA:3.30.565.10 537 702 5.6E-45 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 637 9.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 694 9.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 675 9.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 651 9.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Gene3D G3DSA:3.40.50.2300 829 945 2.4E-34 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SUPERFAMILY SSF55785 341 448 6.98E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SUPERFAMILY SSF47226 924 1046 9.81E-15 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SMART SM00387 583 697 4.7E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Pfam PF01627 Hpt domain 976 1056 4.3E-8 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Gene3D G3DSA:1.10.287.130 477 532 1.4E-17 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SMART SM00388 471 536 8.6E-24 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SUPERFAMILY SSF52172 830 946 3.13E-34 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Pfam PF00072 Response regulator receiver domain 832 939 1.2E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 696 2.9E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SUPERFAMILY SSF47384 456 537 4.9E-21 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SUPERFAMILY SSF55874 525 698 4.58E-44 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PANTHER PTHR24423:SF382 337 719 9.8E-154 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PANTHER PTHR24423:SF382 1 23 9.8E-154 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PANTHER PTHR24423:SF382 829 982 9.8E-154 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 Gene3D G3DSA:1.20.120.160 971 1049 4.0E-12 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 SMART SM00448 830 941 4.0E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PANTHER PTHR24423 337 719 9.8E-154 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PANTHER PTHR24423 1 23 9.8E-154 T 25-04-2016 SMD_RS04050 0ade79cb84aa6b29031643042ab90467 1075 PANTHER PTHR24423 829 982 9.8E-154 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 PANTHER PTHR21499:SF1 19 486 3.5E-176 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 PANTHER PTHR21499 19 486 3.5E-176 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 SUPERFAMILY SSF55021 320 395 1.68E-18 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Pfam PF00696 Amino acid kinase family 20 300 1.3E-39 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Gene3D G3DSA:3.30.360.10 651 806 7.9E-55 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 SUPERFAMILY SSF53633 21 313 3.33E-70 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 1.4E-22 T 25-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Pfam PF13840 ACT domain 407 469 3.0E-9 T 25-04-2016 IPR027795 GATS-like ACT domain SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 PIRSF PIRSF000727 20 831 0.0 T 25-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Gene3D G3DSA:3.40.50.720 479 650 3.3E-58 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Pfam PF00742 Homoserine dehydrogenase 629 824 4.3E-51 T 25-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 6.2E-106 T 25-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 25-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 SUPERFAMILY SSF55021 401 489 2.11E-22 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 SUPERFAMILY SSF55347 629 811 4.38E-48 T 25-04-2016 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Gene3D G3DSA:3.40.1160.10 126 316 6.5E-61 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 Gene3D G3DSA:3.40.1160.10 19 67 6.5E-61 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 25-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS10225 53ab7fb5ee866067f9cefd1760578e2c 834 SUPERFAMILY SSF51735 479 651 8.26E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Gene3D G3DSA:1.10.10.470 550 648 2.2E-21 T 25-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 PANTHER PTHR10357 201 365 3.7E-136 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 PANTHER PTHR10357 17 124 3.7E-136 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 PANTHER PTHR10357 648 845 3.7E-136 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 SMART SM00642 11 433 4.4E-6 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 SUPERFAMILY SSF51445 5 138 1.26E-116 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 SUPERFAMILY SSF51445 191 747 1.26E-116 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Gene3D G3DSA:3.30.1590.10 97 233 2.3E-40 T 25-04-2016 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Pfam PF00128 Alpha amylase, catalytic domain 24 107 3.3E-13 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 PANTHER PTHR10357:SF166 201 365 3.7E-136 T 25-04-2016 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 PANTHER PTHR10357:SF166 17 124 3.7E-136 T 25-04-2016 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 PANTHER PTHR10357:SF166 648 845 3.7E-136 T 25-04-2016 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 840 4.2E-261 T 25-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Gene3D G3DSA:3.20.20.80 249 332 1.9E-64 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Gene3D G3DSA:3.20.20.80 504 548 1.9E-64 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Gene3D G3DSA:3.20.20.80 656 776 1.9E-64 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12685 7f100e8cbf585e6b50e9f2af2df4d505 857 Gene3D G3DSA:3.20.20.80 7 96 1.9E-64 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 PANTHER PTHR30328:SF4 3 203 4.0E-42 T 25-04-2016 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 Gene3D G3DSA:1.10.357.10 67 203 2.5E-54 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 1.4E-21 T 25-04-2016 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 SUPERFAMILY SSF46689 2 78 2.0E-21 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 SUPERFAMILY SSF48498 86 201 1.29E-13 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.4E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.4E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 5.3E-18 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 Gene3D G3DSA:1.10.10.60 3 66 6.9E-24 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 25-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SMD_RS10045 bccfd0efdabd196d7afaccdd23e4fc14 203 PANTHER PTHR30328 3 203 4.0E-42 T 25-04-2016 SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 Pfam PF08668 HDOD domain 15 208 6.7E-51 T 25-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 SUPERFAMILY SSF109604 12 271 2.35E-57 T 25-04-2016 SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 489 7.6E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 Gene3D G3DSA:1.10.3150.10 7 272 2.2E-66 T 25-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 PANTHER PTHR33525:SF3 15 283 1.0E-55 T 25-04-2016 SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 Gene3D G3DSA:3.30.70.270 331 492 6.8E-51 T 25-04-2016 SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 PANTHER PTHR33525 15 283 1.0E-55 T 25-04-2016 SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 SMART SM00267 318 493 4.5E-53 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 492 1.2E-45 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07010 ff9946be3f1b838ca4dfb403cdf28270 512 SUPERFAMILY SSF55073 334 492 3.92E-45 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS14635 90c3334e3ffeac30f7d0a40ce0207b4b 100 SUPERFAMILY SSF55729 11 98 4.84E-25 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14635 90c3334e3ffeac30f7d0a40ce0207b4b 100 PANTHER PTHR31435 11 98 6.1E-25 T 25-04-2016 SMD_RS14635 90c3334e3ffeac30f7d0a40ce0207b4b 100 PANTHER PTHR31435:SF3 11 98 6.1E-25 T 25-04-2016 SMD_RS14635 90c3334e3ffeac30f7d0a40ce0207b4b 100 Pfam PF14542 GCN5-related N-acetyl-transferase 21 97 6.0E-25 T 25-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase SMD_RS14635 90c3334e3ffeac30f7d0a40ce0207b4b 100 Gene3D G3DSA:3.40.630.30 11 99 2.6E-29 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 70 8.5E-15 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 PANTHER PTHR30055 7 198 3.0E-54 T 25-04-2016 SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 SUPERFAMILY SSF48498 90 192 1.29E-6 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 SUPERFAMILY SSF46689 13 78 9.48E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 Gene3D G3DSA:1.10.357.10 22 198 3.0E-29 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.0E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.0E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS16655 df0a6c071e52ae9acda08cb1e45f15c7 200 PANTHER PTHR30055:SF33 7 198 3.0E-54 T 25-04-2016 SMD_RS21610 dbecc9563d628be97b5e11f801a3dd06 1285 PANTHER PTHR36985 2 1285 1.4E-271 T 25-04-2016 SMD_RS21610 dbecc9563d628be97b5e11f801a3dd06 1285 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 953 1283 6.4E-60 T 25-04-2016 IPR007452 Translocation and assembly module TamB SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 Gene3D G3DSA:2.170.130.10 56 165 6.8E-12 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 SUPERFAMILY SSF56935 302 765 8.66E-88 T 25-04-2016 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 SUPERFAMILY SSF56935 37 273 8.66E-88 T 25-04-2016 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 151 5.8E-9 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 Pfam PF00593 TonB dependent receptor 495 761 6.9E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 748 765 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 Gene3D G3DSA:2.40.170.20 166 281 7.4E-84 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 Gene3D G3DSA:2.40.170.20 316 765 7.4E-84 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 PANTHER PTHR32552 255 765 3.0E-26 T 25-04-2016 SMD_RS18415 600a088d69325c009c1f589656f8d01c 765 PANTHER PTHR32552 1 221 3.0E-26 T 25-04-2016 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 Gene3D G3DSA:3.30.1130.10 136 258 1.3E-47 T 25-04-2016 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 PANTHER PTHR34354 1 271 2.6E-85 T 25-04-2016 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 272 137.314 T 25-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 SUPERFAMILY SSF55620 174 254 1.48E-8 T 25-04-2016 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 Pfam PF14489 QueF-like protein 184 257 6.0E-27 T 25-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 124 1.9E-46 T 25-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 PIRSF PIRSF004750 1 272 3.7E-111 T 25-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 PANTHER PTHR34354:SF1 1 271 2.6E-85 T 25-04-2016 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 Gene3D G3DSA:3.30.1130.10 15 125 5.3E-40 T 25-04-2016 SMD_RS20100 e475515595439b3faaa4ce35a9a20146 272 TIGRFAM TIGR03138 QueF: queuine synthase 4 272 2.4E-112 T 25-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS10455 0a9858e54095c3daaee45caeffba2f6c 230 SUPERFAMILY SSF141488 49 122 4.32E-12 T 25-04-2016 IPR018660 C-type lysozyme, inhibitor SMD_RS10455 0a9858e54095c3daaee45caeffba2f6c 230 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 51 113 1.5E-11 T 25-04-2016 IPR018660 C-type lysozyme, inhibitor SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 SMART SM00862 34 110 2.2E-16 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 SUPERFAMILY SSF82171 215 523 9.68E-37 T 25-04-2016 SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 SUPERFAMILY SSF50969 448 684 2.98E-10 T 25-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 SUPERFAMILY SSF46894 12 112 1.93E-16 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Pfam PF07676 WD40-like Beta Propeller Repeat 365 386 3.8E-5 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Pfam PF07676 WD40-like Beta Propeller Repeat 213 235 0.001 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Pfam PF07676 WD40-like Beta Propeller Repeat 270 294 0.014 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Pfam PF07676 WD40-like Beta Propeller Repeat 485 520 6.4E-8 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 110 1.6E-16 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Gene3D G3DSA:2.120.10.30 459 558 1.4E-19 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Gene3D G3DSA:2.120.10.30 720 742 1.4E-19 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Gene3D G3DSA:2.120.10.30 605 670 1.4E-19 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Gene3D G3DSA:2.120.10.30 212 458 3.3E-47 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS18210 4dd425c97147820b4089e6415e09f718 774 Gene3D G3DSA:1.10.10.10 15 113 1.8E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.6E-35 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 3.6E-35 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.6E-35 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 3.6E-35 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 3.6E-35 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 4.3E-151 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 Gene3D G3DSA:3.50.50.60 3 148 2.0E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 Gene3D G3DSA:3.50.50.60 149 344 1.9E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.2E-72 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PIRSF PIRSF000350 1 473 1.7E-74 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PANTHER PTHR22912:SF131 1 469 4.6E-274 T 25-04-2016 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 Gene3D G3DSA:3.30.390.30 345 475 1.1E-45 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 SUPERFAMILY SSF55424 354 475 1.68E-39 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 SUPERFAMILY SSF51905 1 347 1.64E-59 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 8.6E-35 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 1.2E-64 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14475 ba59132b36a6b41bd07603fbf58b8ea8 478 PANTHER PTHR22912 1 469 4.6E-274 T 25-04-2016 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 Gene3D G3DSA:1.10.10.10 5 82 7.0E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 SUPERFAMILY SSF46785 5 114 2.96E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 Pfam PF03466 LysR substrate binding domain 90 294 5.5E-38 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 PANTHER PTHR30537 1 295 7.6E-163 T 25-04-2016 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.7E-22 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 Gene3D G3DSA:3.40.190.10 164 265 6.0E-23 T 25-04-2016 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.8E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.8E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.8E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 PANTHER PTHR30537:SF1 1 295 7.6E-163 T 25-04-2016 SMD_RS05350 789ee1ba7f216f99f631ec38f256402f 298 SUPERFAMILY SSF53850 92 296 1.65E-40 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Gene3D G3DSA:2.40.30.10 312 412 1.7E-37 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 712 0.0 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PANTHER PTHR23115:SF66 261 289 0.0 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PANTHER PTHR23115 310 713 0.0 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 3.3E-32 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SMART SM00838 620 709 6.1E-53 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.3E-66 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PANTHER PTHR23115:SF66 310 713 0.0 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PANTHER PTHR23115:SF66 6 184 0.0 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Hamap MF_00054_B Elongation factor G [fusA]. 6 713 108.775 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Pfam PF03764 Elongation factor G, domain IV 486 618 3.1E-41 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Pfam PF00679 Elongation factor G C-terminus 620 707 3.2E-30 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Gene3D G3DSA:3.30.70.240 619 707 3.5E-33 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.5E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.5E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.5E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.5E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.5E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Pfam PF14492 Elongation Factor G, domain II 411 484 4.1E-35 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SUPERFAMILY SSF54980 623 711 1.29E-30 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SMART SM00889 487 618 4.7E-65 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Gene3D G3DSA:3.30.70.870 413 487 1.8E-39 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PANTHER PTHR23115 6 184 0.0 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 PANTHER PTHR23115 261 289 0.0 T 25-04-2016 SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Gene3D G3DSA:3.40.50.300 6 293 4.2E-103 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SUPERFAMILY SSF54211 486 619 7.08E-39 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SUPERFAMILY SSF54980 411 488 6.47E-26 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Gene3D G3DSA:3.30.230.10 491 618 1.7E-44 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SUPERFAMILY SSF52540 6 288 2.61E-106 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SUPERFAMILY SSF50447 312 409 4.95E-35 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 SUPERFAMILY SSF50447 256 281 4.95E-35 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS04155 55bd6c18714dd2c34f81b5b3f39fe3ec 713 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.7E-17 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMD_RS03185 5c33d23c2e471cea588eb97a701a0906 381 Pfam PF05137 Fimbrial assembly protein (PilN) 287 359 4.1E-9 T 25-04-2016 IPR007813 Fimbrial assembly PilN SMD_RS03185 5c33d23c2e471cea588eb97a701a0906 381 SUPERFAMILY SSF53067 78 177 6.99E-9 T 25-04-2016 SMD_RS03185 5c33d23c2e471cea588eb97a701a0906 381 PANTHER PTHR40278:SF1 4 377 9.6E-66 T 25-04-2016 SMD_RS03185 5c33d23c2e471cea588eb97a701a0906 381 PANTHER PTHR40278 4 377 9.6E-66 T 25-04-2016 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 PANTHER PTHR22769 8 195 4.7E-46 T 25-04-2016 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 Gene3D G3DSA:3.20.20.70 129 316 1.9E-38 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 PANTHER PTHR22769:SF35 8 195 4.7E-46 T 25-04-2016 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 Gene3D G3DSA:3.90.79.10 7 128 1.4E-35 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 Pfam PF00293 NUDIX domain 10 127 2.0E-18 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 SUPERFAMILY SSF51391 118 316 1.31E-43 T 25-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 TIGRFAM TIGR00586 mutt: mutator mutT protein 6 132 2.9E-35 T 25-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 Pfam PF02581 Thiamine monophosphate synthase/TENI 136 313 1.1E-33 T 25-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 SUPERFAMILY SSF55811 6 131 2.03E-35 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 PRINTS PR00502 NUDIX hydrolase family signature 37 51 3.2E-8 T 25-04-2016 IPR020476 NUDIX hydrolase SMD_RS03510 46b5de09ae8dfe0d0a213f3fd79a36bb 317 PRINTS PR00502 NUDIX hydrolase family signature 51 66 3.2E-8 T 25-04-2016 IPR020476 NUDIX hydrolase SMD_RS18330 2f374863fc39cbfb7d4e8d2633882785 305 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 304 9.9E-116 T 25-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SMD_RS18330 2f374863fc39cbfb7d4e8d2633882785 305 PANTHER PTHR30606:SF5 3 305 2.2E-140 T 25-04-2016 SMD_RS18330 2f374863fc39cbfb7d4e8d2633882785 305 PANTHER PTHR30606 3 305 2.2E-140 T 25-04-2016 SMD_RS18330 2f374863fc39cbfb7d4e8d2633882785 305 PIRSF PIRSF026649 4 304 6.3E-93 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMD_RS18330 2f374863fc39cbfb7d4e8d2633882785 305 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 5 304 41.411 T 25-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SMD_RS18330 2f374863fc39cbfb7d4e8d2633882785 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 295 4.0E-70 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 Gene3D G3DSA:1.25.40.80 145 278 8.8E-38 T 25-04-2016 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 Gene3D G3DSA:1.10.579.10 279 467 1.3E-70 T 25-04-2016 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 PANTHER PTHR11455 1 468 2.3E-189 T 25-04-2016 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 PRINTS PR00147 DNA photolyase signature 340 358 1.2E-20 T 25-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 PRINTS PR00147 DNA photolyase signature 379 393 1.2E-20 T 25-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 PRINTS PR00147 DNA photolyase signature 320 336 1.2E-20 T 25-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 PRINTS PR00147 DNA photolyase signature 140 156 1.2E-20 T 25-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 Pfam PF00875 DNA photolyase 4 160 2.7E-52 T 25-04-2016 IPR006050 DNA photolyase, N-terminal SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 SUPERFAMILY SSF48173 189 467 6.54E-97 T 25-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 SUPERFAMILY SSF52425 3 204 5.76E-56 T 25-04-2016 IPR006050 DNA photolyase, N-terminal SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 PANTHER PTHR11455:SF18 1 468 2.3E-189 T 25-04-2016 SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 Pfam PF03441 FAD binding domain of DNA photolyase 270 466 2.3E-77 T 25-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SMD_RS09290 49b6d640e484f8b938743888aa50d1ca 471 Gene3D G3DSA:3.40.50.620 2 144 6.8E-50 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 SUPERFAMILY SSF75217 1 245 1.77E-91 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 104.191 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 PANTHER PTHR32125:SF1 1 230 6.2E-103 T 25-04-2016 SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 6.7E-54 T 25-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 2.6E-82 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 PIRSF PIRSF000386 1 251 7.1E-91 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 Gene3D G3DSA:3.40.1280.10 1 160 6.9E-63 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 PANTHER PTHR32125 1 230 6.2E-103 T 25-04-2016 SMD_RS06430 84ae5a65b849f1f92446317c35c1f0c3 252 Gene3D G3DSA:1.10.1270.20 162 245 2.1E-28 T 25-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMD_RS02095 61982a501f5a0b15e03a2781c6116cc6 306 Pfam PF03631 Virulence factor BrkB 35 282 2.2E-48 T 25-04-2016 IPR017039 Virulence factor BrkB SMD_RS02095 61982a501f5a0b15e03a2781c6116cc6 306 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 281 1.8E-25 T 25-04-2016 IPR017039 Virulence factor BrkB SMD_RS02095 61982a501f5a0b15e03a2781c6116cc6 306 PIRSF PIRSF035875 11 300 4.7E-60 T 25-04-2016 IPR017039 Virulence factor BrkB SMD_RS02095 61982a501f5a0b15e03a2781c6116cc6 306 PANTHER PTHR30213 1 286 2.9E-62 T 25-04-2016 SMD_RS02095 61982a501f5a0b15e03a2781c6116cc6 306 PANTHER PTHR30213:SF1 1 286 2.9E-62 T 25-04-2016 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 Pfam PF05175 Methyltransferase small domain 132 213 6.0E-15 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 PANTHER PTHR18895 1 308 5.1E-167 T 25-04-2016 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 1.6E-117 T 25-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 Gene3D G3DSA:1.10.8.10 11 101 2.8E-8 T 25-04-2016 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 PANTHER PTHR18895:SF66 1 308 5.1E-167 T 25-04-2016 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 287 4.8E-71 T 25-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 SUPERFAMILY SSF53335 12 289 2.33E-46 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 PIRSF PIRSF037167 1 303 1.7E-125 T 25-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 48.811 T 25-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SMD_RS15610 b68609a3017aa78b132c48e1bd8b6bdf 309 Gene3D G3DSA:3.40.50.150 104 282 1.0E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS13225 7abf221c92cf66275567979b312fb5cd 218 Gene3D G3DSA:3.40.50.850 4 184 3.2E-42 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS13225 7abf221c92cf66275567979b312fb5cd 218 SUPERFAMILY SSF52499 9 209 4.19E-48 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS13225 7abf221c92cf66275567979b312fb5cd 218 Pfam PF00857 Isochorismatase family 19 169 3.3E-27 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS13225 7abf221c92cf66275567979b312fb5cd 218 PANTHER PTHR14119:SF1 12 208 3.2E-106 T 25-04-2016 SMD_RS13225 7abf221c92cf66275567979b312fb5cd 218 PANTHER PTHR14119 12 208 3.2E-106 T 25-04-2016 SMD_RS21775 4bac712702a112d252f62bef7c0a0759 259 Pfam PF01925 Sulfite exporter TauE/SafE 13 251 2.0E-40 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMD_RS21775 4bac712702a112d252f62bef7c0a0759 259 PANTHER PTHR30269:SF0 4 258 1.7E-87 T 25-04-2016 SMD_RS21775 4bac712702a112d252f62bef7c0a0759 259 PANTHER PTHR30269 4 258 1.7E-87 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 PANTHER PTHR13903 8 283 5.8E-135 T 25-04-2016 IPR012093 Pirin SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 SUPERFAMILY SSF51182 9 283 1.38E-92 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 PANTHER PTHR13903:SF8 8 283 5.8E-135 T 25-04-2016 SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 Gene3D G3DSA:2.60.120.10 10 257 1.4E-87 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 Pfam PF05726 Pirin C-terminal cupin domain 179 283 5.9E-32 T 25-04-2016 IPR008778 Pirin, C-terminal domain SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 PIRSF PIRSF006232 5 283 4.2E-102 T 25-04-2016 IPR012093 Pirin SMD_RS16280 bef12c24d65da9fae17f44f6cb5def76 283 Pfam PF02678 Pirin 24 124 5.2E-38 T 25-04-2016 IPR003829 Pirin, N-terminal domain SMD_RS20930 fd3c29df8b68eeb92d7cf20afb586083 229 Pfam PF06271 RDD family 25 146 2.0E-17 T 25-04-2016 IPR010432 RDD SMD_RS20930 fd3c29df8b68eeb92d7cf20afb586083 229 PANTHER PTHR38480:SF1 5 206 4.7E-43 T 25-04-2016 SMD_RS20930 fd3c29df8b68eeb92d7cf20afb586083 229 PANTHER PTHR38480 5 206 4.7E-43 T 25-04-2016 SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 Pfam PF04348 LppC putative lipoprotein 45 564 8.1E-110 T 25-04-2016 IPR007443 Penicillin-binding protein activator LpoA SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 Gene3D G3DSA:3.40.50.2300 357 488 7.8E-26 T 25-04-2016 SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 SUPERFAMILY SSF53822 252 569 5.89E-61 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 Gene3D G3DSA:3.40.50.2300 489 555 1.3E-36 T 25-04-2016 SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 Gene3D G3DSA:3.40.50.2300 250 356 1.3E-36 T 25-04-2016 SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 PANTHER PTHR38038 1 571 1.1E-139 T 25-04-2016 SMD_RS03395 6b5c192cf2cebf59132d78e71fe9b773 573 PANTHER PTHR38038:SF1 1 571 1.1E-139 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 Gene3D G3DSA:3.40.50.2300 382 502 7.5E-12 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SMART SM00388 151 216 2.2E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 Pfam PF00072 Response regulator receiver domain 13 118 4.0E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 366 1.4E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SUPERFAMILY SSF55874 219 366 1.57E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 Gene3D G3DSA:3.40.50.2300 11 143 1.3E-25 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SUPERFAMILY SSF52172 11 140 7.83E-27 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PANTHER PTHR24423 135 437 3.8E-63 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PANTHER PTHR24423 11 34 3.8E-63 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PANTHER PTHR24423:SF544 135 437 3.8E-63 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PANTHER PTHR24423:SF544 11 34 3.8E-63 T 25-04-2016 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SUPERFAMILY SSF52172 384 502 3.56E-12 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 Gene3D G3DSA:1.10.287.130 146 212 2.4E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SMART SM00387 257 368 2.9E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SUPERFAMILY SSF47384 146 213 1.0E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 Gene3D G3DSA:3.30.565.10 219 367 1.4E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SMART SM00448 386 498 0.016 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 SMART SM00448 11 123 9.1E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 346 6.2E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 6.2E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 6.2E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18775 e3324ccd0d7b7d5172c342233ba8788a 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 6.2E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13495 2de1a61ecc7cd6af856b94da38935350 450 Pfam PF13520 Amino acid permease 7 402 1.3E-48 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS13495 2de1a61ecc7cd6af856b94da38935350 450 PIRSF PIRSF006060 1 446 1.3E-63 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS13495 2de1a61ecc7cd6af856b94da38935350 450 PANTHER PTHR11785 3 433 3.8E-125 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS13495 2de1a61ecc7cd6af856b94da38935350 450 PANTHER PTHR11785:SF259 3 433 3.8E-125 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 6 447 27.42 T 25-04-2016 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|UniPathway: UPA00253 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 PANTHER PTHR13789:SF205 11 435 8.5E-137 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.1E-18 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.1E-18 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.1E-18 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.1E-18 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 Gene3D G3DSA:3.50.50.60 284 363 6.5E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 Gene3D G3DSA:3.50.50.60 11 184 6.5E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 PANTHER PTHR13789 11 435 8.5E-137 T 25-04-2016 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 Pfam PF01494 FAD binding domain 11 358 3.7E-28 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 SUPERFAMILY SSF51905 11 179 2.78E-57 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS14295 31cfaf0f0d4a6ddd5ba2b011c79adec4 455 SUPERFAMILY SSF51905 283 390 2.78E-57 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS18370 87debe14ac7ce0633458ac73ba22dcdb 389 Pfam PF07396 Phosphate-selective porin O and P 41 389 4.1E-85 T 25-04-2016 IPR010870 Phosphate-selective porin O/P SMD_RS18370 87debe14ac7ce0633458ac73ba22dcdb 389 SUPERFAMILY SSF56935 78 220 2.62E-12 T 25-04-2016 SMD_RS18370 87debe14ac7ce0633458ac73ba22dcdb 389 SUPERFAMILY SSF56935 248 376 2.62E-12 T 25-04-2016 SMD_RS18370 87debe14ac7ce0633458ac73ba22dcdb 389 Gene3D G3DSA:2.40.160.10 25 389 3.9E-94 T 25-04-2016 IPR023614 Porin domain SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 SUPERFAMILY SSF63380 94 199 7.65E-33 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 Pfam PF00677 Lumazine binding domain 3 87 3.7E-20 T 25-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 Pfam PF00677 Lumazine binding domain 100 184 6.3E-22 T 25-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 Gene3D G3DSA:2.40.30.20 5 104 1.4E-29 T 25-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 Gene3D G3DSA:2.40.30.20 105 200 1.1E-32 T 25-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 PIRSF PIRSF000498 1 206 1.3E-72 T 25-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 PANTHER PTHR21098 2 194 8.1E-93 T 25-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 2.0E-59 T 25-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03325 954348840f943cb5a6bab602c0bea0ae 208 SUPERFAMILY SSF63380 1 93 2.38E-23 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 PANTHER PTHR30173 1 185 3.9E-35 T 25-04-2016 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 Pfam PF08281 Sigma-70, region 4 128 179 1.8E-9 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 SUPERFAMILY SSF88946 5 98 2.2E-21 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 SUPERFAMILY SSF88659 123 183 1.64E-11 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 25-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 Gene3D G3DSA:1.10.1740.10 4 107 1.2E-24 T 25-04-2016 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 Gene3D G3DSA:1.10.10.10 124 184 5.1E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 183 8.7E-25 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS00880 f836a4b4633f0d9386e67ee8561c1d45 187 Pfam PF04542 Sigma-70 region 2 24 90 1.1E-13 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10595 350d44634a09105326e5db53048a65da 381 SMART SM00471 193 330 3.6E-7 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS10595 350d44634a09105326e5db53048a65da 381 PANTHER PTHR26402:SF596 264 290 2.0E-32 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 PANTHER PTHR26402:SF596 29 162 2.0E-32 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 Pfam PF00072 Response regulator receiver domain 31 143 3.2E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10595 350d44634a09105326e5db53048a65da 381 Gene3D G3DSA:1.10.3210.10 197 362 3.0E-22 T 25-04-2016 IPR006674 HD domain SMD_RS10595 350d44634a09105326e5db53048a65da 381 Pfam PF13487 HD domain 248 311 1.9E-18 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 SMART SM00448 29 144 7.0E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10595 350d44634a09105326e5db53048a65da 381 SUPERFAMILY SSF109604 170 357 6.57E-41 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 PANTHER PTHR26402 264 290 2.0E-32 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 PANTHER PTHR26402 29 162 2.0E-32 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 Gene3D G3DSA:3.40.50.2300 28 159 4.6E-33 T 25-04-2016 SMD_RS10595 350d44634a09105326e5db53048a65da 381 SUPERFAMILY SSF52172 29 178 2.13E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 PANTHER PTHR26402 9 228 1.1E-94 T 25-04-2016 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 Pfam PF00072 Response regulator receiver domain 11 119 2.1E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 PANTHER PTHR26402:SF530 9 228 1.1E-94 T 25-04-2016 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 SMART SM00862 151 227 2.3E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 Gene3D G3DSA:1.10.10.10 136 228 1.6E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 2.8E-20 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 SUPERFAMILY SSF46894 136 227 1.22E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 SUPERFAMILY SSF52172 6 132 9.96E-40 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 Gene3D G3DSA:3.40.50.2300 7 127 7.3E-38 T 25-04-2016 SMD_RS20915 16ecf72b939936affcc4d70f1203d00f 229 SMART SM00448 9 119 1.4E-39 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 Gene3D G3DSA:2.40.50.140 11 86 6.6E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 193 443 9.8E-25 T 25-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 PANTHER PTHR11061 16 444 6.4E-120 T 25-04-2016 SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 436 1.9E-96 T 25-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 444 69.117 T 25-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 Gene3D G3DSA:3.40.50.150 264 442 4.4E-55 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 SUPERFAMILY SSF53335 75 443 4.86E-81 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 PANTHER PTHR11061:SF30 16 444 6.4E-120 T 25-04-2016 SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 374 404 - T 25-04-2016 IPR030390 RNA methyltransferase TrmA, active site SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 SUPERFAMILY SSF50249 13 73 5.37E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16205 87cc7c34061254c6b6f73b115edf7f4e 444 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 426 436 - T 25-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SMD_RS07575 1a79efc45ea7aae78313168a1fdcb72c 165 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 34 9.3E-7 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07575 1a79efc45ea7aae78313168a1fdcb72c 165 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 13 143 6.9E-27 T 25-04-2016 IPR013362 Pilus modification type IV, PilV SMD_RS07575 1a79efc45ea7aae78313168a1fdcb72c 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 33 2.3E-5 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS14415 210fc7a11233230908d5252bb7f2f317 119 SUPERFAMILY SSF46785 5 79 2.86E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14415 210fc7a11233230908d5252bb7f2f317 119 SMART SM00345 16 75 1.2E-12 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS14415 210fc7a11233230908d5252bb7f2f317 119 PANTHER PTHR38445 1 114 1.8E-25 T 25-04-2016 SMD_RS14415 210fc7a11233230908d5252bb7f2f317 119 Gene3D G3DSA:1.10.10.10 4 75 2.2E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14415 210fc7a11233230908d5252bb7f2f317 119 PANTHER PTHR38445:SF2 1 114 1.8E-25 T 25-04-2016 SMD_RS14415 210fc7a11233230908d5252bb7f2f317 119 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.5E-14 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS14550 a9b529c598ae0863a54da4d47e3db932 144 Pfam PF01322 Cytochrome C' 95 144 1.7E-5 T 25-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 SMD_RS14550 a9b529c598ae0863a54da4d47e3db932 144 Gene3D G3DSA:1.20.120.10 95 144 5.0E-7 T 25-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SMD_RS14550 a9b529c598ae0863a54da4d47e3db932 144 SUPERFAMILY SSF47175 47 144 1.91E-12 T 25-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SMD_RS17930 0e84c78c017d27a8bd6a181b5e48b99a 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 2.3E-36 T 25-04-2016 IPR013527 YicC-like, N-terminal SMD_RS17930 0e84c78c017d27a8bd6a181b5e48b99a 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 1.9E-34 T 25-04-2016 IPR013551 Domain of unknown function DUF1732 SMD_RS17930 0e84c78c017d27a8bd6a181b5e48b99a 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 1.9E-79 T 25-04-2016 IPR005229 Conserved hypothetical protein CHP00255 SMD_RS17930 0e84c78c017d27a8bd6a181b5e48b99a 286 PANTHER PTHR30636 1 286 2.1E-99 T 25-04-2016 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 Gene3D G3DSA:3.40.810.20 285 382 7.8E-4 T 25-04-2016 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 Gene3D G3DSA:3.40.1080.10 36 227 3.9E-9 T 25-04-2016 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 4 547 1.0E-297 T 25-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 5 547 1.5E-290 T 25-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 PANTHER PTHR13707 109 453 2.6E-94 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 SUPERFAMILY SSF100950 408 504 1.26E-21 T 25-04-2016 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 SUPERFAMILY SSF100950 221 380 1.26E-21 T 25-04-2016 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 SUPERFAMILY SSF100950 35 273 1.52E-32 T 25-04-2016 SMD_RS06045 3abde7ce89dcc391ef728eec2772b842 547 PANTHER PTHR13707:SF27 109 453 2.6E-94 T 25-04-2016 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 PANTHER PTHR32552 7 712 8.2E-238 T 25-04-2016 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 Gene3D G3DSA:2.40.170.20 185 712 9.7E-126 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 SUPERFAMILY SSF56935 33 712 3.66E-118 T 25-04-2016 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 712 1.0E-111 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 Pfam PF00593 TonB dependent receptor 479 710 1.2E-23 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 Gene3D G3DSA:2.170.130.10 49 176 2.0E-32 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 168 1.1E-14 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18650 b13919c0e26e66591675227e0a662a66 712 PANTHER PTHR32552:SF37 7 712 8.2E-238 T 25-04-2016 SMD_RS17715 9a1e1bbf283fb18ab71093864354c740 185 PANTHER PTHR30466 1 177 3.5E-42 T 25-04-2016 SMD_RS17715 9a1e1bbf283fb18ab71093864354c740 185 SUPERFAMILY SSF50475 6 171 3.19E-40 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS17715 9a1e1bbf283fb18ab71093864354c740 185 SMART SM00903 16 167 4.7E-15 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SMD_RS17715 9a1e1bbf283fb18ab71093864354c740 185 Gene3D G3DSA:2.30.110.10 6 174 1.5E-44 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS17715 9a1e1bbf283fb18ab71093864354c740 185 Pfam PF01613 Flavin reductase like domain 20 163 6.7E-19 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SMD_RS17715 9a1e1bbf283fb18ab71093864354c740 185 PANTHER PTHR30466:SF6 1 177 3.5E-42 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 Gene3D G3DSA:1.10.287.950 598 802 8.0E-60 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 710 739 1.8E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 346 1.8E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 758 787 1.8E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 604 633 1.8E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 681 708 1.8E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 SUPERFAMILY SSF58104 550 834 9.68E-71 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 SMART SM00304 349 401 1.1E-8 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 SMART SM00304 480 537 79.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 645 829 1.7E-60 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 Gene3D G3DSA:3.30.450.20 185 326 3.1E-10 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PANTHER PTHR32089 317 383 4.7E-152 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PANTHER PTHR32089 565 833 4.7E-152 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PANTHER PTHR32089:SF63 317 383 4.7E-152 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 PANTHER PTHR32089:SF63 565 833 4.7E-152 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 Pfam PF00672 HAMP domain 330 398 3.1E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 SMART SM00283 583 830 5.6E-92 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 SUPERFAMILY SSF158472 349 399 3.4E-8 T 25-04-2016 SMD_RS19270 5c206560b811e599c70acd6a94945ed0 843 Pfam PF02743 Cache domain 47 266 6.4E-14 T 25-04-2016 IPR033479 Double Cache domain 1 SMD_RS04255 8fcdc8708893670d20149012b4508679 180 PANTHER PTHR13718 17 177 1.7E-69 T 25-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SMD_RS04255 8fcdc8708893670d20149012b4508679 180 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 24 176 5.9E-64 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMD_RS04255 8fcdc8708893670d20149012b4508679 180 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 170 6.9E-28 T 25-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04255 8fcdc8708893670d20149012b4508679 180 SUPERFAMILY SSF54768 21 89 9.1E-22 T 25-04-2016 SMD_RS04255 8fcdc8708893670d20149012b4508679 180 Gene3D G3DSA:3.30.230.10 90 172 2.5E-30 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS04255 8fcdc8708893670d20149012b4508679 180 Pfam PF00333 Ribosomal protein S5, N-terminal domain 26 87 1.2E-26 T 25-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS04255 8fcdc8708893670d20149012b4508679 180 ProSitePatterns PS00585 Ribosomal protein S5 signature. 41 73 - T 25-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SMD_RS04255 8fcdc8708893670d20149012b4508679 180 Gene3D G3DSA:3.30.160.20 22 85 1.4E-27 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMD_RS04255 8fcdc8708893670d20149012b4508679 180 SUPERFAMILY SSF54211 92 172 3.29E-24 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS04255 8fcdc8708893670d20149012b4508679 180 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 176 34.049 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 PANTHER PTHR30376 9 287 1.9E-110 T 25-04-2016 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 259 285 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 Gene3D G3DSA:1.10.601.10 22 129 5.2E-36 T 25-04-2016 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 289 1.8E-123 T 25-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 286 1.8E-31 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 291 52.074 T 25-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 SUPERFAMILY SSF88659 216 288 5.05E-16 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 PIRSF PIRSF000770 12 291 6.0E-34 T 25-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 Pfam PF04545 Sigma-70, region 4 236 286 1.6E-14 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 Pfam PF00140 Sigma-70 factor, region 1.2 22 53 1.8E-5 T 25-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 Gene3D G3DSA:1.10.10.10 231 287 6.0E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 PRINTS PR00046 Major sigma-70 factor signature 239 251 2.0E-19 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 PRINTS PR00046 Major sigma-70 factor signature 84 97 2.0E-19 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 PRINTS PR00046 Major sigma-70 factor signature 274 285 2.0E-19 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 PRINTS PR00046 Major sigma-70 factor signature 259 274 2.0E-19 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 SUPERFAMILY SSF88946 22 129 8.5E-38 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS20005 2975c8afc2999b5dc6fabaadf22ee8a2 291 Pfam PF04542 Sigma-70 region 2 60 129 1.3E-16 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16870 747ea10c075aeab515e91e7dc9c7a760 170 PANTHER PTHR23091:SF258 1 169 5.6E-42 T 25-04-2016 SMD_RS16870 747ea10c075aeab515e91e7dc9c7a760 170 PANTHER PTHR23091 1 169 5.6E-42 T 25-04-2016 SMD_RS16870 747ea10c075aeab515e91e7dc9c7a760 170 Pfam PF00583 Acetyltransferase (GNAT) family 66 146 4.8E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS16870 747ea10c075aeab515e91e7dc9c7a760 170 Gene3D G3DSA:3.40.630.30 1 161 1.5E-33 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS16870 747ea10c075aeab515e91e7dc9c7a760 170 SUPERFAMILY SSF55729 3 169 5.65E-29 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 SUPERFAMILY SSF52210 125 290 8.11E-56 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 PANTHER PTHR11117 1 291 2.7E-193 T 25-04-2016 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 Pfam PF02629 CoA binding domain 6 99 1.0E-30 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 SUPERFAMILY SSF51735 1 124 8.4E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 Gene3D G3DSA:3.40.50.720 2 121 6.0E-56 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 25-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 SMART SM00881 4 100 5.9E-37 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 Pfam PF00549 CoA-ligase 153 274 3.1E-19 T 25-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 Gene3D G3DSA:3.40.50.261 122 289 4.1E-75 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 9.0E-37 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.0E-37 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 9.0E-37 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 9.0E-37 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 PIRSF PIRSF001553 1 291 2.2E-130 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS17425 c167f50bb3d7a7167fe939de30f79c4e 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 6.5E-139 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMD_RS16435 aa79d55dd501faaaf26aec0991077d37 123 PANTHER PTHR26402 2 122 2.1E-41 T 25-04-2016 SMD_RS16435 aa79d55dd501faaaf26aec0991077d37 123 SMART SM00448 2 115 1.2E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16435 aa79d55dd501faaaf26aec0991077d37 123 Pfam PF00072 Response regulator receiver domain 4 115 1.2E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16435 aa79d55dd501faaaf26aec0991077d37 123 SUPERFAMILY SSF52172 1 120 1.08E-37 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS16435 aa79d55dd501faaaf26aec0991077d37 123 Gene3D G3DSA:3.40.50.2300 1 121 8.9E-39 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 Gene3D G3DSA:2.170.130.10 71 170 2.1E-18 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 168 4.1E-16 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 44 852 6.2E-209 T 25-04-2016 IPR010104 Bacterial TonB-dependent receptor SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 SUPERFAMILY SSF56935 261 458 1.69E-98 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 SUPERFAMILY SSF56935 496 851 1.69E-98 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 SUPERFAMILY SSF56935 36 233 1.69E-98 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 Pfam PF00593 TonB dependent receptor 587 851 1.2E-30 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 Gene3D G3DSA:2.40.170.20 504 851 1.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 Gene3D G3DSA:2.40.170.20 171 369 1.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 Gene3D G3DSA:2.40.170.20 404 457 1.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 PANTHER PTHR32552:SF16 258 349 1.3E-33 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 PANTHER PTHR32552:SF16 411 853 1.3E-33 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 PANTHER PTHR32552:SF16 19 238 1.3E-33 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 PANTHER PTHR32552 258 349 1.3E-33 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 PANTHER PTHR32552 19 238 1.3E-33 T 25-04-2016 SMD_RS09270 ba8afbea0b2b8218efbeff12c96f4b8b 853 PANTHER PTHR32552 411 853 1.3E-33 T 25-04-2016 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 SUPERFAMILY SSF51735 14 197 2.59E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 SMART SM00984 324 423 2.3E-29 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 14 418 7.7E-114 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 421 8.5E-20 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 14 185 9.7E-32 T 25-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 SUPERFAMILY SSF48179 208 298 2.55E-25 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 Gene3D G3DSA:3.40.50.720 239 423 5.2E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 Gene3D G3DSA:3.40.50.720 13 229 7.2E-53 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 PIRSF PIRSF000124 14 427 4.2E-49 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 PANTHER PTHR11374 10 426 1.7E-219 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 SUPERFAMILY SSF52413 315 425 3.79E-23 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 297 2.6E-24 T 25-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 PIRSF PIRSF500136 4 430 7.9E-144 T 25-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SMD_RS08660 db9c45543f8faed43a3124dc3b4daef7 430 PANTHER PTHR11374:SF25 10 426 1.7E-219 T 25-04-2016 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 SUPERFAMILY SSF69593 308 533 1.02E-27 T 25-04-2016 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 Gene3D G3DSA:3.40.1130.10 334 481 9.0E-8 T 25-04-2016 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 PANTHER PTHR12563 33 175 0.0 T 25-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 PANTHER PTHR12563 194 873 0.0 T 25-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 PANTHER PTHR12563:SF14 33 175 0.0 T 25-04-2016 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 PANTHER PTHR12563:SF14 194 873 0.0 T 25-04-2016 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 PIRSF PIRSF000437 64 876 0.0 T 25-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 54 865 29.64 T 25-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 PIRSF PIRSF500064 40 877 0.0 T 25-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 58 861 0.0 T 25-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 SMART SM00563 349 476 2.1E-29 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS00415 dc1828f78205e57dc6b7293662f2ee5b 878 Pfam PF01553 Acyltransferase 334 473 3.3E-23 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 Pfam PF12832 MFS_1 like family 7 363 1.5E-69 T 25-04-2016 IPR024989 Major facilitator superfamily associated domain SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 PANTHER PTHR23522 1 353 5.8E-63 T 25-04-2016 SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 Gene3D G3DSA:1.20.1250.20 196 381 1.3E-28 T 25-04-2016 SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 PANTHER PTHR23522:SF3 1 353 5.8E-63 T 25-04-2016 SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 SUPERFAMILY SSF103473 5 380 1.74E-37 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 Gene3D G3DSA:1.20.1250.20 7 172 5.9E-10 T 25-04-2016 SMD_RS14375 43fd95684173f1303360c78478cfb2b3 394 PIRSF PIRSF004925 1 393 8.3E-87 T 25-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 SMART SM00014 120 234 1.8E-16 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 Pfam PF01569 PAP2 superfamily 132 233 1.4E-18 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 169 176 - T 25-04-2016 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 75 94 1.0E-38 T 25-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 165 191 1.0E-38 T 25-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 197 221 1.0E-38 T 25-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 231 249 1.0E-38 T 25-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 PRINTS PR00483 Bacterial acid phosphatase class A signature 139 157 1.0E-38 T 25-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 SUPERFAMILY SSF48317 37 251 1.7E-44 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 PIRSF PIRSF000897 8 270 2.2E-100 T 25-04-2016 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 SMD_RS00295 53d22666fdb8d4b6051f97e63e644087 279 Gene3D G3DSA:1.20.144.10 41 254 5.0E-51 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS15250 63f6ab6a5ec3ba3b9654a0d1d318a3ef 77 Gene3D G3DSA:2.30.30.320 11 76 6.1E-27 T 25-04-2016 IPR023387 DUF1653-like domain SMD_RS15250 63f6ab6a5ec3ba3b9654a0d1d318a3ef 77 Pfam PF07866 Protein of unknown function (DUF1653) 14 73 6.6E-25 T 25-04-2016 IPR023387 DUF1653-like domain SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 Gene3D G3DSA:3.20.20.70 134 267 1.2E-51 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 PANTHER PTHR32179 12 278 5.4E-117 T 25-04-2016 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 277 1.1E-85 T 25-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 SUPERFAMILY SSF54675 12 112 2.12E-28 T 25-04-2016 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 277 6.1E-50 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 SUPERFAMILY SSF51690 114 278 1.06E-53 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 Gene3D G3DSA:3.90.1170.20 8 133 1.3E-46 T 25-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 111 1.2E-21 T 25-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMD_RS07520 8ae0e2077aca0b83ee50210e03d0197a 283 PIRSF PIRSF006250 9 280 3.2E-86 T 25-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 Gene3D G3DSA:3.30.420.40 1 128 1.2E-37 T 25-04-2016 SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 PANTHER PTHR11735:SF11 1 127 4.4E-42 T 25-04-2016 SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 PANTHER PTHR11735 1 127 4.4E-42 T 25-04-2016 SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 SUPERFAMILY SSF53067 1 101 2.55E-26 T 25-04-2016 SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 SUPERFAMILY SSF53067 107 213 5.44E-19 T 25-04-2016 SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 Pfam PF00814 Glycoprotease family 28 129 1.8E-25 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS16800 6d3acbb36281867c3d5475effd643fd7 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 215 7.4E-52 T 25-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 Pfam PF13531 Bacterial extracellular solute-binding protein 22 244 9.8E-51 T 25-04-2016 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 27 243 5.0E-54 T 25-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 Gene3D G3DSA:3.40.190.10 109 203 1.3E-33 T 25-04-2016 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 Gene3D G3DSA:3.40.190.10 208 244 1.6E-21 T 25-04-2016 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 Gene3D G3DSA:3.40.190.10 5 108 1.6E-21 T 25-04-2016 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 PIRSF PIRSF004846 3 247 2.1E-70 T 25-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 PANTHER PTHR30632:SF0 19 244 7.0E-61 T 25-04-2016 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 SUPERFAMILY SSF53850 21 245 1.04E-64 T 25-04-2016 SMD_RS12730 a2ca4b78b5dcc040082dc9b0ba686aae 247 PANTHER PTHR30632 19 244 7.0E-61 T 25-04-2016 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 PANTHER PTHR11638 1 858 0.0 T 25-04-2016 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 SMART SM01086 769 858 2.8E-36 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Gene3D G3DSA:3.40.50.300 550 780 1.4E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 PANTHER PTHR11638:SF18 1 858 0.0 T 25-04-2016 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Gene3D G3DSA:1.10.8.60 343 429 5.2E-37 T 25-04-2016 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 3.5E-13 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.5E-11 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 6.4E-9 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 2.7E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 2.7E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.7E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.7E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 SMART SM00382 597 770 7.3E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 SMART SM00382 198 343 1.8E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 SUPERFAMILY SSF81923 4 156 2.06E-39 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Gene3D G3DSA:1.10.1780.10 1 147 3.2E-43 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.0E-55 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 25-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 SUPERFAMILY SSF52540 159 545 9.9E-101 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 SUPERFAMILY SSF52540 546 855 2.43E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Gene3D G3DSA:1.10.8.60 781 859 2.6E-30 T 25-04-2016 SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Gene3D G3DSA:3.40.50.300 160 342 1.7E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17335 8d5d639891adc3f6af6435c16c104794 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 9.8E-26 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS17760 c930bbc14eec43ca55c90eed7bcb8942 149 Pfam PF14316 Domain of unknown function (DUF4381) 6 132 1.7E-23 T 25-04-2016 IPR025489 Protein of unknown function (DUF4381 SMD_RS02755 1b7e1532cd9356631eacb1fd20c12ccd 192 SMART SM00855 2 148 3.4E-4 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS02755 1b7e1532cd9356631eacb1fd20c12ccd 192 SUPERFAMILY SSF53254 3 178 8.99E-32 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS02755 1b7e1532cd9356631eacb1fd20c12ccd 192 PANTHER PTHR23029 1 162 1.0E-24 T 25-04-2016 SMD_RS02755 1b7e1532cd9356631eacb1fd20c12ccd 192 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 31 180 1.0E-31 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS02755 1b7e1532cd9356631eacb1fd20c12ccd 192 PANTHER PTHR23029:SF1 1 162 1.0E-24 T 25-04-2016 SMD_RS02755 1b7e1532cd9356631eacb1fd20c12ccd 192 Gene3D G3DSA:3.40.50.1240 2 180 4.8E-31 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 Gene3D G3DSA:3.40.640.10 497 736 1.5E-42 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 Gene3D G3DSA:3.40.640.10 90 306 8.5E-17 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 SUPERFAMILY SSF53383 20 440 6.84E-105 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 SUPERFAMILY SSF53383 921 943 7.29E-101 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 SUPERFAMILY SSF53383 469 878 7.29E-101 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 942 0.0 T 25-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 PANTHER PTHR11773 1 955 0.0 T 25-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 948 25.661 T 25-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 Pfam PF02347 Glycine cleavage system P-protein 447 732 1.3E-12 T 25-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 Pfam PF02347 Glycine cleavage system P-protein 19 440 1.1E-178 T 25-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SMD_RS16350 c2b6a64f93b3ff41c65af2e1898a1489 955 PANTHER PTHR11773:SF1 1 955 0.0 T 25-04-2016 SMD_RS10865 4b51dec3842adc8fd78f7fef3367f484 125 SUPERFAMILY SSF52172 1 118 4.27E-27 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10865 4b51dec3842adc8fd78f7fef3367f484 125 Gene3D G3DSA:3.40.50.2300 1 123 5.4E-28 T 25-04-2016 SMD_RS10865 4b51dec3842adc8fd78f7fef3367f484 125 Pfam PF00072 Response regulator receiver domain 6 114 5.6E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10865 4b51dec3842adc8fd78f7fef3367f484 125 SMART SM00448 4 117 5.7E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10865 4b51dec3842adc8fd78f7fef3367f484 125 PANTHER PTHR26402:SF506 4 118 6.0E-29 T 25-04-2016 SMD_RS10865 4b51dec3842adc8fd78f7fef3367f484 125 PANTHER PTHR26402 4 118 6.0E-29 T 25-04-2016 SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 SUPERFAMILY SSF53098 22 215 1.14E-51 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 Pfam PF00929 Exonuclease 33 207 2.1E-27 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 TIGRFAM TIGR01298 RNaseT: ribonuclease T 23 215 1.6E-101 T 25-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 PANTHER PTHR30231:SF2 19 214 1.3E-103 T 25-04-2016 SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 SMART SM00479 31 216 1.2E-22 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 Hamap MF_00157 Ribonuclease T [rnt]. 1 216 91.008 T 25-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 Gene3D G3DSA:3.30.420.10 23 215 4.0E-51 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS07205 2dc8df3c6da93568657d4242e57b81f7 216 PANTHER PTHR30231 19 214 1.3E-103 T 25-04-2016 SMD_RS03895 984ddf6cb70e006dd663688b7477c107 193 Pfam PF00881 Nitroreductase family 12 168 1.9E-20 T 25-04-2016 IPR029479 Nitroreductase SMD_RS03895 984ddf6cb70e006dd663688b7477c107 193 Gene3D G3DSA:3.40.109.10 9 186 1.3E-32 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS03895 984ddf6cb70e006dd663688b7477c107 193 SUPERFAMILY SSF55469 9 186 7.85E-29 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS03895 984ddf6cb70e006dd663688b7477c107 193 PIRSF PIRSF000232 1 192 2.5E-61 T 25-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- SMD_RS03895 984ddf6cb70e006dd663688b7477c107 193 PANTHER PTHR23026:SF107 6 190 6.9E-68 T 25-04-2016 SMD_RS03895 984ddf6cb70e006dd663688b7477c107 193 PANTHER PTHR23026 6 190 6.9E-68 T 25-04-2016 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 PANTHER PTHR11019 35 282 4.4E-37 T 25-04-2016 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 SUPERFAMILY SSF46689 233 276 1.34E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 SUPERFAMILY SSF51215 32 156 9.81E-6 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 PANTHER PTHR11019:SF80 35 282 4.4E-37 T 25-04-2016 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 Pfam PF12833 Helix-turn-helix domain 197 275 1.0E-16 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 Gene3D G3DSA:1.10.10.60 232 278 3.8E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 Gene3D G3DSA:2.60.120.280 32 158 1.8E-4 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS10150 68db55b447d569bf35a32128aa4095a6 297 SMART SM00342 191 274 1.7E-15 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS18455 e822c650de27ed5bcac0a7469e22fa13 179 Gene3D G3DSA:1.25.40.10 79 178 7.0E-34 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS18455 e822c650de27ed5bcac0a7469e22fa13 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 176 2.1E-53 T 25-04-2016 IPR010323 Protein of unknown function DUF924 SMD_RS18455 e822c650de27ed5bcac0a7469e22fa13 179 Gene3D G3DSA:1.20.58.320 4 78 5.4E-30 T 25-04-2016 SMD_RS18455 e822c650de27ed5bcac0a7469e22fa13 179 SUPERFAMILY SSF48452 4 175 1.1E-61 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS18455 e822c650de27ed5bcac0a7469e22fa13 179 PANTHER PTHR23004 5 179 3.2E-67 T 25-04-2016 SMD_RS18455 e822c650de27ed5bcac0a7469e22fa13 179 PANTHER PTHR23004:SF7 5 179 3.2E-67 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 PANTHER PTHR10799 368 748 3.5E-80 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SUPERFAMILY SSF141868 653 904 2.09E-86 T 25-04-2016 IPR001633 EAL domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Pfam PF00563 EAL domain 655 889 2.2E-67 T 25-04-2016 IPR001633 EAL domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Gene3D G3DSA:3.30.450.20 221 339 9.3E-16 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Gene3D G3DSA:3.30.450.20 351 464 5.3E-12 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Gene3D G3DSA:3.30.450.20 108 220 6.8E-22 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SMART SM00267 466 638 8.3E-62 T 25-04-2016 IPR000160 GGDEF domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Gene3D G3DSA:3.20.20.450 652 902 6.2E-92 T 25-04-2016 IPR001633 EAL domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 PANTHER PTHR10799:SF774 368 748 3.5E-80 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SMART SM00086 171 214 2.3E-9 T 25-04-2016 IPR001610 PAC motif SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SMART SM00086 299 341 25.0 T 25-04-2016 IPR001610 PAC motif SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SMART SM00086 425 466 0.19 T 25-04-2016 IPR001610 PAC motif SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Gene3D G3DSA:3.30.70.270 479 641 2.3E-55 T 25-04-2016 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SMART SM00052 648 894 6.8E-107 T 25-04-2016 IPR001633 EAL domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SUPERFAMILY SSF55785 143 216 7.42E-14 T 25-04-2016 IPR000014 PAS domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Pfam PF08447 PAS fold 141 208 6.8E-18 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 474 637 1.4E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 219 1.6E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Pfam PF08448 PAS fold 250 343 7.5E-6 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SUPERFAMILY SSF55785 371 474 9.77E-11 T 25-04-2016 IPR000014 PAS domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SUPERFAMILY SSF55073 482 640 1.88E-48 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 7.8E-48 T 25-04-2016 IPR000160 GGDEF domain SMD_RS11005 31b6f127245e3a146e9b8eecf4febb64 919 SUPERFAMILY SSF55785 211 339 3.32E-13 T 25-04-2016 IPR000014 PAS domain SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 1.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 1.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 1.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 SUPERFAMILY SSF55874 312 480 1.96E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 SMART SM00388 258 323 5.2E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 Pfam PF00672 HAMP domain 194 254 1.4E-11 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 SUPERFAMILY SSF47384 249 322 2.55E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 321 5.5E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 Gene3D G3DSA:3.30.450.20 89 156 2.2E-4 T 25-04-2016 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 SUPERFAMILY SSF103190 79 180 1.02E-8 T 25-04-2016 IPR029151 Periplasmic sensor domain-like SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 PANTHER PTHR24423 201 480 1.1E-63 T 25-04-2016 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 PANTHER PTHR24423 89 133 1.1E-63 T 25-04-2016 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 478 1.7E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 SMART SM00387 368 479 9.4E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 Gene3D G3DSA:3.30.565.10 330 480 1.4E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 SMART SM00304 207 258 2.0E-5 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06690 22ae9b1563b64f1bf02db9ff0e53b11c 486 Gene3D G3DSA:1.10.287.130 260 318 4.0E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS19660 127a9beaefaeefe5504f998a7d4c04cf 157 PANTHER PTHR38692:SF1 2 157 3.5E-82 T 25-04-2016 SMD_RS19660 127a9beaefaeefe5504f998a7d4c04cf 157 Pfam PF04361 Protein of unknown function (DUF494) 5 157 1.7E-56 T 25-04-2016 IPR007456 Smg SMD_RS19660 127a9beaefaeefe5504f998a7d4c04cf 157 Hamap MF_00598 Protein Smg [smg]. 5 157 30.574 T 25-04-2016 IPR007456 Smg SMD_RS19660 127a9beaefaeefe5504f998a7d4c04cf 157 PANTHER PTHR38692 2 157 3.5E-82 T 25-04-2016 SMD_RS03525 13aecde310b914ca6963bed0f283c8d3 308 PANTHER PTHR10992 43 306 3.1E-14 T 25-04-2016 SMD_RS03525 13aecde310b914ca6963bed0f283c8d3 308 Pfam PF12697 Alpha/beta hydrolase family 54 295 1.7E-13 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS03525 13aecde310b914ca6963bed0f283c8d3 308 PANTHER PTHR10992:SF778 43 306 3.1E-14 T 25-04-2016 SMD_RS03525 13aecde310b914ca6963bed0f283c8d3 308 Gene3D G3DSA:3.40.50.1820 42 305 2.3E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS03525 13aecde310b914ca6963bed0f283c8d3 308 SUPERFAMILY SSF53474 51 305 1.52E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05950 97b6bcf64f1bada9dcfb261f719df0a4 281 SUPERFAMILY SSF51658 30 266 2.49E-12 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05950 97b6bcf64f1bada9dcfb261f719df0a4 281 Gene3D G3DSA:3.20.20.150 8 273 2.2E-98 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05950 97b6bcf64f1bada9dcfb261f719df0a4 281 Hamap MF_00697 UPF0276 protein . 10 278 44.551 T 25-04-2016 IPR007801 Uncharacterised protein family UPF0276 SMD_RS05950 97b6bcf64f1bada9dcfb261f719df0a4 281 PANTHER PTHR42194 4 278 5.8E-121 T 25-04-2016 SMD_RS05950 97b6bcf64f1bada9dcfb261f719df0a4 281 Pfam PF05114 Protein of unknown function (DUF692) 10 270 8.7E-101 T 25-04-2016 IPR007801 Uncharacterised protein family UPF0276 SMD_RS05950 97b6bcf64f1bada9dcfb261f719df0a4 281 PANTHER PTHR42194:SF1 4 278 5.8E-121 T 25-04-2016 SMD_RS02080 04f71e50f049d4fd8cf7f483eb51865f 323 PANTHER PTHR18640:SF9 1 321 5.0E-101 T 25-04-2016 SMD_RS02080 04f71e50f049d4fd8cf7f483eb51865f 323 PANTHER PTHR18640 1 321 5.0E-101 T 25-04-2016 IPR016833 Putative sodium bile acid cotransporter SMD_RS02080 04f71e50f049d4fd8cf7f483eb51865f 323 PIRSF PIRSF026166 1 323 6.2E-128 T 25-04-2016 IPR016833 Putative sodium bile acid cotransporter SMD_RS02080 04f71e50f049d4fd8cf7f483eb51865f 323 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 11 320 7.1E-97 T 25-04-2016 IPR016833 Putative sodium bile acid cotransporter SMD_RS18135 3b1270d4d675395aac528a7f768ba8e2 141 PANTHER PTHR30558:SF9 14 139 1.8E-57 T 25-04-2016 SMD_RS18135 3b1270d4d675395aac528a7f768ba8e2 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 137 2.1E-52 T 25-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 SMD_RS18135 3b1270d4d675395aac528a7f768ba8e2 141 PANTHER PTHR30558 14 139 1.8E-57 T 25-04-2016 SMD_RS18135 3b1270d4d675395aac528a7f768ba8e2 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 1.6E-26 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 Gene3D G3DSA:1.10.10.10 8 90 3.8E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 SUPERFAMILY SSF53850 96 295 3.8E-28 T 25-04-2016 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 Gene3D G3DSA:3.40.190.10 97 179 1.4E-4 T 25-04-2016 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 SUPERFAMILY SSF46785 6 88 1.36E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.0E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.0E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.0E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 Pfam PF03466 LysR substrate binding domain 96 294 2.0E-27 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 PANTHER PTHR30537:SF16 1 295 2.6E-105 T 25-04-2016 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.8E-19 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 Gene3D G3DSA:3.40.190.10 180 265 3.0E-30 T 25-04-2016 SMD_RS15545 87f65d3adb28a683735b5967e2220c8b 295 PANTHER PTHR30537 1 295 2.6E-105 T 25-04-2016 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 PANTHER PTHR10986 2 117 1.5E-60 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 Pfam PF00453 Ribosomal protein L20 3 109 2.3E-47 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 25-04-2016 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 Gene3D G3DSA:1.10.1900.20 55 117 2.2E-30 T 25-04-2016 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-48 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 PANTHER PTHR10986:SF12 2 117 1.5E-60 T 25-04-2016 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.746597E-39 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.746597E-39 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.746597E-39 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.447 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMD_RS15330 985d62a3a16410f4948284327be6b815 119 SUPERFAMILY SSF74731 3 117 1.36E-48 T 25-04-2016 SMD_RS15985 20b05bd107781b31ea5d6ea4da3b451a 147 PANTHER PTHR36919 1 146 6.0E-39 T 25-04-2016 SMD_RS15985 20b05bd107781b31ea5d6ea4da3b451a 147 PANTHER PTHR36919:SF1 1 146 6.0E-39 T 25-04-2016 SMD_RS15985 20b05bd107781b31ea5d6ea4da3b451a 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 146 1.1E-32 T 25-04-2016 IPR019223 Domain of unknown function DUF2147 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 332 4.0E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 SMART SM00388 264 332 1.3E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 SUPERFAMILY SSF47384 247 333 4.12E-17 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 Gene3D G3DSA:1.10.287.130 256 328 4.1E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 2.4E-7 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 2.4E-7 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 2.4E-7 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 Gene3D G3DSA:3.30.565.10 335 484 1.5E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 SMART SM00387 378 486 4.4E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 484 1.3E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 SUPERFAMILY SSF55874 323 484 6.02E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 PANTHER PTHR24423 69 131 8.2E-58 T 25-04-2016 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 PANTHER PTHR24423 193 486 8.2E-58 T 25-04-2016 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 PANTHER PTHR24423 23 50 8.2E-58 T 25-04-2016 SMD_RS02800 c13f5069cf8cd374000d20f45f0f4992 489 Pfam PF00672 HAMP domain 180 251 8.0E-7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 SUPERFAMILY SSF53474 487 740 1.62E-74 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 Pfam PF00326 Prolyl oligopeptidase family 546 740 1.9E-54 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 SUPERFAMILY SSF82171 39 469 1.23E-52 T 25-04-2016 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 PANTHER PTHR11731:SF110 41 58 1.6E-202 T 25-04-2016 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 PANTHER PTHR11731:SF110 98 740 1.6E-202 T 25-04-2016 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 PANTHER PTHR11731 41 58 1.6E-202 T 25-04-2016 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 PANTHER PTHR11731 98 740 1.6E-202 T 25-04-2016 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 Gene3D G3DSA:2.140.10.30 23 470 9.4E-111 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 Gene3D G3DSA:3.40.50.1820 486 740 9.9E-87 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21035 b1f5d66ea296696ad8d95304e3bfce3f 741 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 127 450 1.3E-92 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 SUPERFAMILY SSF52374 38 373 5.93E-92 T 25-04-2016 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Gene3D G3DSA:3.40.50.620 38 106 6.2E-39 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Gene3D G3DSA:3.40.50.620 221 262 6.2E-39 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 70 83 4.0E-8 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 219 229 4.0E-8 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 53 4.0E-8 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 367 559 6.9E-57 T 25-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 580 53.105 T 25-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 SUPERFAMILY SSF50715 367 578 2.82E-71 T 25-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Gene3D G3DSA:2.40.240.10 375 488 2.3E-45 T 25-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 280 348 8.9E-15 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 38 260 1.3E-79 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Gene3D G3DSA:1.10.1160.10 288 365 1.0E-33 T 25-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Gene3D G3DSA:2.40.240.10 489 578 3.1E-30 T 25-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 Gene3D G3DSA:3.90.800.10 110 218 4.3E-43 T 25-04-2016 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PANTHER PTHR11451 294 581 8.6E-212 T 25-04-2016 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PANTHER PTHR11451 19 256 8.6E-212 T 25-04-2016 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PANTHER PTHR11451:SF29 294 581 8.6E-212 T 25-04-2016 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 PANTHER PTHR11451:SF29 19 256 8.6E-212 T 25-04-2016 SMD_RS03820 15782d5fbeedc5b629a9fcb8cb494fb9 582 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 38 581 1.1E-210 T 25-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 9.5E-25 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 PANTHER PTHR22748 1 266 2.1E-98 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 3.1E-70 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 1.0E-65 T 25-04-2016 SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 Gene3D G3DSA:3.60.10.10 1 265 4.1E-88 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS01890 4bf8e7e08f86f0ce9b7a5100e8946688 266 SUPERFAMILY SSF56219 1 266 7.46E-75 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS03485 20431be17053310ba8a2255170a02100 411 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 349 37.375 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SMD_RS03485 20431be17053310ba8a2255170a02100 411 Gene3D G3DSA:3.30.1330.20 217 321 2.9E-45 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SMD_RS03485 20431be17053310ba8a2255170a02100 411 SMART SM00865 209 327 1.9E-52 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SMD_RS03485 20431be17053310ba8a2255170a02100 411 PANTHER PTHR30314 4 409 3.0E-189 T 25-04-2016 SMD_RS03485 20431be17053310ba8a2255170a02100 411 SUPERFAMILY SSF55307 206 319 5.04E-42 T 25-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SMD_RS03485 20431be17053310ba8a2255170a02100 411 PANTHER PTHR30314:SF3 4 409 3.0E-189 T 25-04-2016 SMD_RS03485 20431be17053310ba8a2255170a02100 411 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 327 3.3E-129 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SMD_RS03485 20431be17053310ba8a2255170a02100 411 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 3.3E-40 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 SMART SM00864 15 207 4.9E-112 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 25-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SMD_RS03485 20431be17053310ba8a2255170a02100 411 SUPERFAMILY SSF52490 15 210 2.35E-69 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 Gene3D G3DSA:3.40.50.1440 16 216 1.3E-91 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 Pfam PF12327 FtsZ family, C-terminal domain 224 318 6.0E-37 T 25-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SMD_RS03485 20431be17053310ba8a2255170a02100 411 PRINTS PR00423 Cell division protein FtsZ signature 214 235 3.7E-52 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 PRINTS PR00423 Cell division protein FtsZ signature 191 213 3.7E-52 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 PRINTS PR00423 Cell division protein FtsZ signature 100 120 3.7E-52 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS03485 20431be17053310ba8a2255170a02100 411 PRINTS PR00423 Cell division protein FtsZ signature 128 149 3.7E-52 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMD_RS15215 4dd5b17ba320857bca71f5581582929c 123 SMART SM00960 7 97 1.8E-11 T 25-04-2016 IPR004942 Roadblock/LAMTOR2 domain SMD_RS15215 4dd5b17ba320857bca71f5581582929c 123 SUPERFAMILY SSF103196 8 120 1.13E-17 T 25-04-2016 SMD_RS15215 4dd5b17ba320857bca71f5581582929c 123 Gene3D G3DSA:3.30.450.30 9 120 5.9E-16 T 25-04-2016 SMD_RS15215 4dd5b17ba320857bca71f5581582929c 123 Pfam PF03259 Roadblock/LC7 domain 10 85 4.0E-12 T 25-04-2016 IPR004942 Roadblock/LAMTOR2 domain SMD_RS16355 c580e82760fd2a1aff6a94db3fda9027 136 PIRSF PIRSF021700 1 135 2.7E-27 T 25-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase SMD_RS16355 c580e82760fd2a1aff6a94db3fda9027 136 PANTHER PTHR33990:SF4 1 135 2.4E-34 T 25-04-2016 SMD_RS16355 c580e82760fd2a1aff6a94db3fda9027 136 Gene3D G3DSA:3.10.180.10 3 133 9.2E-35 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS16355 c580e82760fd2a1aff6a94db3fda9027 136 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 128 1.8E-25 T 25-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase SMD_RS16355 c580e82760fd2a1aff6a94db3fda9027 136 SUPERFAMILY SSF54593 5 133 5.63E-28 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS16355 c580e82760fd2a1aff6a94db3fda9027 136 PANTHER PTHR33990 1 135 2.4E-34 T 25-04-2016 SMD_RS00575 a6eead231670e5ea454fd2660dbf5b67 543 SUPERFAMILY SSF111283 39 534 4.71E-92 T 25-04-2016 SMD_RS00575 a6eead231670e5ea454fd2660dbf5b67 543 Pfam PF01523 Putative modulator of DNA gyrase 57 383 1.3E-53 T 25-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS00575 a6eead231670e5ea454fd2660dbf5b67 543 PANTHER PTHR30624 263 539 4.3E-199 T 25-04-2016 SMD_RS00575 a6eead231670e5ea454fd2660dbf5b67 543 PANTHER PTHR30624 32 244 4.3E-199 T 25-04-2016 SMD_RS00575 a6eead231670e5ea454fd2660dbf5b67 543 PANTHER PTHR30624:SF10 263 539 4.3E-199 T 25-04-2016 SMD_RS00575 a6eead231670e5ea454fd2660dbf5b67 543 PANTHER PTHR30624:SF10 32 244 4.3E-199 T 25-04-2016 SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 Pfam PF08668 HDOD domain 140 268 5.4E-24 T 25-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 SUPERFAMILY SSF52172 2 129 1.08E-11 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 Gene3D G3DSA:3.40.50.2300 2 122 1.7E-8 T 25-04-2016 SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 PANTHER PTHR33525 129 337 8.5E-22 T 25-04-2016 SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 SUPERFAMILY SSF109604 131 344 5.65E-38 T 25-04-2016 SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 PIRSF PIRSF036883 1 369 3.8E-127 T 25-04-2016 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 Gene3D G3DSA:1.10.3150.10 123 346 9.2E-44 T 25-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMD_RS18190 3a88e46fedea9b54f880d3b188fbcd98 373 PANTHER PTHR33525:SF3 129 337 8.5E-22 T 25-04-2016 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 Gene3D G3DSA:3.40.50.2300 3 152 1.6E-28 T 25-04-2016 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 SUPERFAMILY SSF46894 133 205 1.63E-14 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 Pfam PF00072 Response regulator receiver domain 5 117 8.3E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 SMART SM00448 3 117 9.0E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 3.0E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 Gene3D G3DSA:1.10.10.10 153 205 5.3E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 PANTHER PTHR26402:SF458 3 207 2.3E-44 T 25-04-2016 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 SUPERFAMILY SSF52172 3 138 5.12E-25 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 PANTHER PTHR26402 3 207 2.3E-44 T 25-04-2016 SMD_RS01825 2e986e69ed5337ae4dfbb3f130f35e74 208 SMART SM00421 146 203 9.7E-16 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS10910 a58464ac98516699ac1b279280741374 405 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 7.2E-43 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PANTHER PTHR30244:SF1 2 177 3.2E-128 T 25-04-2016 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PANTHER PTHR30244:SF1 233 405 3.2E-128 T 25-04-2016 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PRINTS PR00207 Flagellin signature 76 95 2.7E-27 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PRINTS PR00207 Flagellin signature 37 54 2.7E-27 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PRINTS PR00207 Flagellin signature 111 134 2.7E-27 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 Gene3D G3DSA:1.20.1330.10 306 360 3.0E-58 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 Gene3D G3DSA:1.20.1330.10 54 172 3.0E-58 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 403 4.5E-28 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10910 a58464ac98516699ac1b279280741374 405 SUPERFAMILY SSF64518 1 404 3.66E-105 T 25-04-2016 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PANTHER PTHR30244 2 177 3.2E-128 T 25-04-2016 SMD_RS10910 a58464ac98516699ac1b279280741374 405 PANTHER PTHR30244 233 405 3.2E-128 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PANTHER PTHR11946 236 261 0.0 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 858 4.7E-267 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 3.7E-203 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Gene3D G3DSA:3.90.740.10 207 407 1.3E-40 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PANTHER PTHR11946:SF11 289 908 0.0 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Gene3D G3DSA:1.10.730.10 658 802 9.0E-39 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 SUPERFAMILY SSF52374 5 203 1.15E-134 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 SUPERFAMILY SSF52374 421 662 1.15E-134 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 20.884 T 25-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Gene3D G3DSA:3.40.50.620 421 653 4.6E-133 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Gene3D G3DSA:3.40.50.620 18 206 4.6E-133 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 6.8E-8 T 25-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PANTHER PTHR11946 7 216 0.0 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PANTHER PTHR11946 289 908 0.0 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 SUPERFAMILY SSF50677 205 421 2.09E-39 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 1.2E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.2E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.2E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.2E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 1.2E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PANTHER PTHR11946:SF11 236 261 0.0 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 PANTHER PTHR11946:SF11 7 216 0.0 T 25-04-2016 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 857 4.0E-23 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMD_RS06265 6c2c68e6959dda8237626c579a2910ff 943 SUPERFAMILY SSF47323 668 934 2.45E-68 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS18770 ded244670cb3b7ccc17ec8412c78e734 247 PIRSF PIRSF009120 1 247 1.3E-87 T 25-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 SMD_RS18770 ded244670cb3b7ccc17ec8412c78e734 247 Pfam PF00227 Proteasome subunit 4 186 4.7E-9 T 25-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SMD_RS18770 ded244670cb3b7ccc17ec8412c78e734 247 Gene3D G3DSA:3.60.20.10 2 203 2.9E-16 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS18770 ded244670cb3b7ccc17ec8412c78e734 247 SUPERFAMILY SSF56235 2 243 1.99E-33 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 5.5E-46 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 PANTHER PTHR30266:SF2 1 134 5.6E-51 T 25-04-2016 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 25-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 26.244 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 6.1E-14 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 6.1E-14 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 6.1E-14 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 1.0E-44 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 PANTHER PTHR30266 1 134 5.6E-51 T 25-04-2016 SMD_RS17575 61d2d02bf460d9830774139c05d8230e 134 SUPERFAMILY SSF81330 12 129 6.54E-37 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMD_RS07475 4e3e915184c66b5ba35b2dd0cadd583d 322 Pfam PF13280 WYL domain 139 310 1.3E-19 T 25-04-2016 IPR026881 WYL domain SMD_RS07475 4e3e915184c66b5ba35b2dd0cadd583d 322 SUPERFAMILY SSF46785 6 62 5.9E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07475 4e3e915184c66b5ba35b2dd0cadd583d 322 Gene3D G3DSA:1.10.10.10 6 66 2.7E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07475 4e3e915184c66b5ba35b2dd0cadd583d 322 PANTHER PTHR30595:SF3 1 275 8.8E-29 T 25-04-2016 SMD_RS07475 4e3e915184c66b5ba35b2dd0cadd583d 322 Pfam PF08279 HTH domain 7 62 4.8E-15 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMD_RS07475 4e3e915184c66b5ba35b2dd0cadd583d 322 PANTHER PTHR30595 1 275 8.8E-29 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 SUPERFAMILY SSF52540 540 586 8.04E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 SUPERFAMILY SSF52540 623 853 8.04E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:1.10.8.280 163 290 1.9E-27 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 ProSitePatterns PS00211 ABC transporters family signature. 769 783 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 SUPERFAMILY SSF52540 156 290 2.26E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 SUPERFAMILY SSF52540 371 497 2.26E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 SUPERFAMILY SSF52540 21 102 2.26E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 PANTHER PTHR32282 19 331 0.0 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 PANTHER PTHR32282 613 879 0.0 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 PANTHER PTHR32282 376 588 0.0 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:3.40.50.300 612 631 1.7E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:3.40.50.300 406 527 2.1E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:3.40.50.300 528 575 1.7E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:3.40.50.300 14 66 2.1E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:3.40.50.300 760 878 1.7E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:1.20.1580.10 633 759 7.1E-48 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:1.20.1580.10 375 405 3.0E-30 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:1.20.1580.10 291 330 3.0E-30 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 Gene3D G3DSA:1.20.1580.10 107 161 3.0E-30 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 PANTHER PTHR32282:SF4 19 331 0.0 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 PANTHER PTHR32282:SF4 613 879 0.0 T 25-04-2016 SMD_RS11545 81f5ee4301c2b1a7431c593eb5e09c97 881 PANTHER PTHR32282:SF4 376 588 0.0 T 25-04-2016 SMD_RS00550 6289636282b2bc5778abd309fb27732b 298 Pfam PF01882 Protein of unknown function DUF58 44 132 3.7E-20 T 25-04-2016 IPR002881 Domain of unknown function DUF58 SMD_RS00550 6289636282b2bc5778abd309fb27732b 298 PANTHER PTHR33608:SF2 1 298 1.2E-81 T 25-04-2016 SMD_RS00550 6289636282b2bc5778abd309fb27732b 298 SUPERFAMILY SSF53300 83 209 4.89E-7 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS00550 6289636282b2bc5778abd309fb27732b 298 PANTHER PTHR33608 1 298 1.2E-81 T 25-04-2016 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 Pfam PF12833 Helix-turn-helix domain 243 320 1.2E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 PANTHER PTHR11019 177 327 2.5E-25 T 25-04-2016 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 6.4E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 6.4E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 Pfam PF01965 DJ-1/PfpI family 76 177 5.6E-9 T 25-04-2016 IPR002818 DJ-1/PfpI SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 Gene3D G3DSA:1.10.10.60 227 274 3.8E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 SUPERFAMILY SSF52317 11 199 2.71E-18 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 Gene3D G3DSA:3.40.50.880 11 226 1.3E-22 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 315 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 SUPERFAMILY SSF46689 273 320 1.79E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 Gene3D G3DSA:1.10.10.60 275 320 1.1E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 SMART SM00342 237 319 6.2E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13515 5c336f9bc977e59baa57754e3c7c888f 355 SUPERFAMILY SSF46689 222 271 5.38E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07210 329366be11d4b07e1c2ce9607fa6db46 173 PANTHER PTHR33452 20 160 3.6E-59 T 25-04-2016 SMD_RS07210 329366be11d4b07e1c2ce9607fa6db46 173 PANTHER PTHR33452:SF7 20 160 3.6E-59 T 25-04-2016 SMD_RS07210 329366be11d4b07e1c2ce9607fa6db46 173 Pfam PF07681 DoxX 22 107 1.5E-18 T 25-04-2016 IPR032808 DoxX family SMD_RS21180 5b03b1791f4c5256fee61a72b4cc0485 151 Gene3D G3DSA:1.10.10.10 1 142 3.5E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21180 5b03b1791f4c5256fee61a72b4cc0485 151 PANTHER PTHR33221 2 146 8.3E-37 T 25-04-2016 SMD_RS21180 5b03b1791f4c5256fee61a72b4cc0485 151 Pfam PF02082 Transcriptional regulator 1 81 2.2E-19 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type SMD_RS21180 5b03b1791f4c5256fee61a72b4cc0485 151 PANTHER PTHR33221:SF7 2 146 8.3E-37 T 25-04-2016 SMD_RS21180 5b03b1791f4c5256fee61a72b4cc0485 151 SUPERFAMILY SSF46785 7 135 1.21E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13805 c9ad3b512428a0ea36362e7962abc49d 559 SUPERFAMILY SSF52540 95 545 1.17E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13805 c9ad3b512428a0ea36362e7962abc49d 559 PANTHER PTHR37937:SF1 2 558 4.3E-122 T 25-04-2016 SMD_RS13805 c9ad3b512428a0ea36362e7962abc49d 559 PANTHER PTHR37937 2 558 4.3E-122 T 25-04-2016 SMD_RS13805 c9ad3b512428a0ea36362e7962abc49d 559 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 115 550 2.2E-107 T 25-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SMD_RS13805 c9ad3b512428a0ea36362e7962abc49d 559 Gene3D G3DSA:3.40.50.300 348 542 3.2E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13805 c9ad3b512428a0ea36362e7962abc49d 559 Gene3D G3DSA:3.40.50.300 92 203 3.2E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04740 930df811e82e747007997b67546149c6 94 Pfam PF12728 Helix-turn-helix domain 22 72 2.3E-10 T 25-04-2016 SMD_RS04740 930df811e82e747007997b67546149c6 94 SUPERFAMILY SSF46955 21 78 9.7E-9 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS04740 930df811e82e747007997b67546149c6 94 Gene3D G3DSA:1.10.10.10 21 77 1.3E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Pfam PF01225 Mur ligase family, catalytic domain 25 69 9.2E-9 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 389 4.0E-9 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Gene3D G3DSA:3.90.190.20 320 455 3.0E-45 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 454 32.33 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 PANTHER PTHR23135:SF3 13 454 7.0E-159 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Gene3D G3DSA:3.40.1390.10 6 80 1.5E-23 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 SUPERFAMILY SSF53623 102 319 1.14E-51 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 453 3.9E-133 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 SUPERFAMILY SSF63418 3 92 4.19E-23 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Gene3D G3DSA:3.40.1190.10 83 317 2.6E-63 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 SUPERFAMILY SSF53244 321 453 5.04E-32 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 Pfam PF08245 Mur ligase middle domain 105 300 5.3E-42 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03445 d613080d51c5a9fd46b518063e2b677f 464 PANTHER PTHR23135 13 454 7.0E-159 T 25-04-2016 SMD_RS21450 5507aabb1aec6724ef4c085b0a87b213 78 Pfam PF00830 Ribosomal L28 family 3 62 1.4E-27 T 25-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SMD_RS21450 5507aabb1aec6724ef4c085b0a87b213 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.7E-26 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21450 5507aabb1aec6724ef4c085b0a87b213 78 SUPERFAMILY SSF143800 2 77 7.06E-31 T 25-04-2016 SMD_RS21450 5507aabb1aec6724ef4c085b0a87b213 78 Gene3D G3DSA:2.30.170.40 2 78 2.5E-37 T 25-04-2016 SMD_RS21450 5507aabb1aec6724ef4c085b0a87b213 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.466 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 SUPERFAMILY SSF143456 6 187 9.42E-63 T 25-04-2016 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 PANTHER PTHR30327 1 188 3.6E-60 T 25-04-2016 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 5.6E-49 T 25-04-2016 IPR003774 Protein of unknown function UPF0301 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 Gene3D G3DSA:3.30.70.1300 46 131 1.5E-27 T 25-04-2016 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 PANTHER PTHR30327:SF1 1 188 3.6E-60 T 25-04-2016 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 36.435 T 25-04-2016 IPR003774 Protein of unknown function UPF0301 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 Gene3D G3DSA:3.40.1740.10 6 45 1.2E-31 T 25-04-2016 SMD_RS05375 37787d3b8fa38be248e5bcaf2eb34082 188 Gene3D G3DSA:3.40.1740.10 132 178 1.2E-31 T 25-04-2016 SMD_RS17475 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS17475 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS17475 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS17475 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS07740 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS07740 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07740 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07740 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS01565 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS01565 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS01565 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS01565 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS09405 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS09405 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09405 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09405 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS19550 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS19550 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19550 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19550 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS00855 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS00855 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS00855 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS00855 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS02960 b5e67af2a2e8ca047a30e3874548c8e7 87 PANTHER PTHR33609 1 87 1.8E-41 T 25-04-2016 SMD_RS02960 b5e67af2a2e8ca047a30e3874548c8e7 87 Gene3D G3DSA:1.10.10.60 7 82 2.2E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS02960 b5e67af2a2e8ca047a30e3874548c8e7 87 SUPERFAMILY SSF46689 1 68 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS02960 b5e67af2a2e8ca047a30e3874548c8e7 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 PANTHER PTHR24032 1 262 5.5E-93 T 25-04-2016 SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 5.9E-78 T 25-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 Gene3D G3DSA:3.60.21.10 1 134 2.5E-50 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 Gene3D G3DSA:3.60.21.10 170 267 2.5E-50 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 Pfam PF00149 Calcineurin-like phosphoesterase 1 124 3.6E-13 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 SUPERFAMILY SSF56300 1 279 3.17E-49 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 PANTHER PTHR24032:SF27 1 262 5.5E-93 T 25-04-2016 SMD_RS03740 3535b94d8a546bce3dd0f0162ea7ced6 338 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 44.637 T 25-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 180 2.6E-23 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 Pfam PF04542 Sigma-70 region 2 24 87 1.4E-5 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 Gene3D G3DSA:1.10.10.10 120 181 1.7E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 Pfam PF08281 Sigma-70, region 4 124 176 2.0E-17 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 Gene3D G3DSA:1.10.1740.10 18 119 1.1E-7 T 25-04-2016 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 SUPERFAMILY SSF88946 19 92 8.24E-8 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 SUPERFAMILY SSF88659 94 182 4.86E-17 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS03920 cd6e60e313f11c2846221f185257eb0b 184 PANTHER PTHR30173 18 181 2.6E-29 T 25-04-2016 SMD_RS04935 61d37b4ce14f0ff45a9ed5a037dc5da3 380 SUPERFAMILY SSF53955 97 242 5.16E-30 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS04935 61d37b4ce14f0ff45a9ed5a037dc5da3 380 Pfam PF01464 Transglycosylase SLT domain 108 212 6.2E-22 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS04935 61d37b4ce14f0ff45a9ed5a037dc5da3 380 Gene3D G3DSA:1.10.530.10 103 247 7.9E-33 T 25-04-2016 SMD_RS04935 61d37b4ce14f0ff45a9ed5a037dc5da3 380 PANTHER PTHR21666 103 294 1.5E-31 T 25-04-2016 SMD_RS04935 61d37b4ce14f0ff45a9ed5a037dc5da3 380 PANTHER PTHR21666:SF206 103 294 1.5E-31 T 25-04-2016 SMD_RS16685 7f5b015e87a41ca08ae7c9e814e7231f 442 Gene3D G3DSA:1.20.1250.20 20 219 7.2E-15 T 25-04-2016 SMD_RS16685 7f5b015e87a41ca08ae7c9e814e7231f 442 PANTHER PTHR31187 77 432 7.1E-83 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 SMD_RS16685 7f5b015e87a41ca08ae7c9e814e7231f 442 PANTHER PTHR31187 19 56 7.1E-83 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 SMD_RS16685 7f5b015e87a41ca08ae7c9e814e7231f 442 Pfam PF07690 Major Facilitator Superfamily 72 346 1.8E-12 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS16685 7f5b015e87a41ca08ae7c9e814e7231f 442 SUPERFAMILY SSF103473 22 440 7.19E-26 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06755 7405f537442945490871c7200d806431 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 1.2E-33 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS06755 7405f537442945490871c7200d806431 163 PANTHER PTHR10815 1 155 1.4E-52 T 25-04-2016 SMD_RS06755 7405f537442945490871c7200d806431 163 SUPERFAMILY SSF46767 75 156 2.35E-31 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS06755 7405f537442945490871c7200d806431 163 Gene3D G3DSA:1.10.10.10 75 156 2.8E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06755 7405f537442945490871c7200d806431 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 3.0E-31 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS06755 7405f537442945490871c7200d806431 163 PANTHER PTHR10815:SF5 1 155 1.4E-52 T 25-04-2016 SMD_RS06755 7405f537442945490871c7200d806431 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 25-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SMD_RS06755 7405f537442945490871c7200d806431 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 8 68 2.2E-4 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SMD_RS06755 7405f537442945490871c7200d806431 163 SUPERFAMILY SSF53155 5 79 1.73E-17 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SMD_RS06755 7405f537442945490871c7200d806431 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 3 158 36.866 T 25-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 SMD_RS07790 892ab2241929397dbc72befc34b0d25a 161 Pfam PF04214 Protein of unknown function, DUF 72 131 1.8E-29 T 25-04-2016 IPR007332 Protein of unknown function DUF411 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 Gene3D G3DSA:3.30.450.90 208 323 3.5E-46 T 25-04-2016 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 Gene3D G3DSA:3.40.50.300 329 601 1.7E-93 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 78 176 1.2E-16 T 25-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 SUPERFAMILY SSF160246 75 174 5.49E-14 T 25-04-2016 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 418 432 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 SUPERFAMILY SSF52540 211 598 1.31E-94 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 SMART SM00382 351 472 1.5E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 Pfam PF00437 Type II/IV secretion system protein 230 490 6.9E-73 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 PANTHER PTHR30258:SF13 71 609 0.0 T 25-04-2016 SMD_RS21630 c0fca5fa1a688dc2683d3f37b6c1fb1f 611 PANTHER PTHR30258 71 609 0.0 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 242 819 1.8E-186 T 25-04-2016 IPR014143 DNA ligase D SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Gene3D G3DSA:3.30.470.30 255 365 2.5E-26 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Gene3D G3DSA:2.40.50.140 415 531 3.2E-38 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 SUPERFAMILY SSF50249 415 530 4.24E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 PANTHER PTHR10459 242 535 2.1E-114 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 546 790 2.1E-99 T 25-04-2016 IPR014145 DNA ligase D, polymerase domain SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 232 531 1.1E-97 T 25-04-2016 IPR014146 DNA ligase D, ligase domain SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 163 8.9E-65 T 25-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 PANTHER PTHR10459:SF70 242 535 2.1E-114 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Pfam PF04679 ATP dependent DNA ligase C terminal region 433 526 9.7E-22 T 25-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Gene3D G3DSA:3.30.1490.70 370 413 2.9E-15 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Gene3D G3DSA:3.30.1490.70 226 254 2.9E-15 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Pfam PF13298 DNA polymerase Ligase (LigD) 40 144 2.7E-35 T 25-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 SUPERFAMILY SSF56091 210 413 2.09E-43 T 25-04-2016 SMD_RS00240 e3072cb86596fbf5976666cdbecfdb11 830 Pfam PF01068 ATP dependent DNA ligase domain 245 412 2.4E-23 T 25-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS06425 dea3442178bad58acd87555cee2db002 170 SUPERFAMILY SSF50447 8 95 2.15E-18 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS06425 dea3442178bad58acd87555cee2db002 170 SUPERFAMILY SSF50346 101 170 1.46E-18 T 25-04-2016 IPR011033 PRC-barrel-like SMD_RS06425 dea3442178bad58acd87555cee2db002 170 PANTHER PTHR33692 1 170 1.9E-53 T 25-04-2016 SMD_RS06425 dea3442178bad58acd87555cee2db002 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 23.921 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMD_RS06425 dea3442178bad58acd87555cee2db002 170 Pfam PF05239 PRC-barrel domain 98 164 1.5E-5 T 25-04-2016 IPR027275 PRC-barrel domain SMD_RS06425 dea3442178bad58acd87555cee2db002 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 4.7E-52 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMD_RS06425 dea3442178bad58acd87555cee2db002 170 Pfam PF01782 RimM N-terminal domain 10 92 3.1E-21 T 25-04-2016 IPR002676 RimM protein GO:0006364 SMD_RS06425 dea3442178bad58acd87555cee2db002 170 Gene3D G3DSA:2.30.30.240 101 170 4.8E-25 T 25-04-2016 SMD_RS06425 dea3442178bad58acd87555cee2db002 170 Gene3D G3DSA:2.40.30.60 4 95 1.5E-25 T 25-04-2016 IPR002676 RimM protein GO:0006364 SMD_RS00650 596d078e7f89f74aac3f75a8be825983 275 PANTHER PTHR35535 81 173 1.5E-16 T 25-04-2016 SMD_RS00650 596d078e7f89f74aac3f75a8be825983 275 Pfam PF14302 Domain of unknown function (DUF4377) 184 269 2.0E-24 T 25-04-2016 IPR025485 Domain of unknown function DUF4377 SMD_RS00650 596d078e7f89f74aac3f75a8be825983 275 PANTHER PTHR35535:SF1 81 173 1.5E-16 T 25-04-2016 SMD_RS00650 596d078e7f89f74aac3f75a8be825983 275 Pfam PF03724 META domain 50 164 1.0E-24 T 25-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 3.8E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 Gene3D G3DSA:3.40.50.2300 1 120 2.5E-33 T 25-04-2016 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 PANTHER PTHR26402 1 221 1.0E-74 T 25-04-2016 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 SUPERFAMILY SSF52172 1 118 3.13E-34 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 SMART SM00862 144 219 1.0E-22 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 PANTHER PTHR26402:SF518 1 221 1.0E-74 T 25-04-2016 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 Pfam PF00072 Response regulator receiver domain 3 112 1.5E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 SMART SM00448 1 112 3.4E-31 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 SUPERFAMILY SSF46894 118 220 3.68E-24 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS12440 7a7e2e41c3a7cf5d33bfe7b7b62b3b75 224 Gene3D G3DSA:1.10.10.10 123 221 2.0E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 Gene3D G3DSA:3.10.640.10 1 178 8.0E-76 T 25-04-2016 SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 Pfam PF07152 YaeQ protein 1 172 5.7E-73 T 25-04-2016 IPR009822 YaeQ SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 PANTHER PTHR38784 1 182 1.7E-83 T 25-04-2016 SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 SUPERFAMILY SSF52980 2 178 2.14E-67 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 PANTHER PTHR38784:SF1 1 182 1.7E-83 T 25-04-2016 SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 PIRSF PIRSF011484 1 180 4.9E-65 T 25-04-2016 IPR009822 YaeQ SMD_RS09595 95aaa59ee67d2a95cb9b3c4dc8318351 182 SMART SM01322 1 176 2.9E-110 T 25-04-2016 IPR009822 YaeQ SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 SMART SM00851 20 133 5.0E-52 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 458 1.2E-112 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 Gene3D G3DSA:3.40.140.20 252 367 2.5E-47 T 25-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 SMART SM00798 138 459 4.4E-190 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 Pfam PF02142 MGS-like domain 20 132 2.2E-24 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 SUPERFAMILY SSF52335 8 197 2.62E-64 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 SUPERFAMILY SSF53927 220 527 3.41E-126 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 44.121 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 Gene3D G3DSA:3.40.50.1380 6 191 6.5E-77 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 PANTHER PTHR11692:SF2 6 527 4.8E-295 T 25-04-2016 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 527 1.1E-215 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 PIRSF PIRSF000414 3 527 4.1E-211 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 Gene3D G3DSA:3.40.140.20 375 517 2.0E-56 T 25-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS19985 dfd1c210631d38bad6d1f489d0f3cbd1 527 PANTHER PTHR11692 6 527 4.8E-295 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMD_RS14275 d59cfd5739b579e24b3e1a19ab186d0d 212 SUPERFAMILY SSF50475 9 198 3.32E-29 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS14275 d59cfd5739b579e24b3e1a19ab186d0d 212 Pfam PF04299 Putative FMN-binding domain 1 163 4.2E-37 T 25-04-2016 IPR007396 Transcriptional regulator PAI 2-type SMD_RS14275 d59cfd5739b579e24b3e1a19ab186d0d 212 PIRSF PIRSF010372 1 207 1.7E-41 T 25-04-2016 IPR007396 Transcriptional regulator PAI 2-type SMD_RS14275 d59cfd5739b579e24b3e1a19ab186d0d 212 PANTHER PTHR35802 2 212 2.5E-43 T 25-04-2016 SMD_RS14275 d59cfd5739b579e24b3e1a19ab186d0d 212 Gene3D G3DSA:2.30.110.10 1 203 1.5E-51 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS14275 d59cfd5739b579e24b3e1a19ab186d0d 212 PANTHER PTHR35802:SF1 2 212 2.5E-43 T 25-04-2016 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 Gene3D G3DSA:3.20.20.140 70 415 4.1E-100 T 25-04-2016 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 SUPERFAMILY SSF51556 55 376 1.84E-90 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 ProSitePatterns PS00483 Dihydroorotase signature 2. 312 323 - T 25-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 Gene3D G3DSA:2.30.40.10 4 69 1.5E-24 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 SUPERFAMILY SSF51338 1 54 1.22E-31 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 SUPERFAMILY SSF51338 376 439 1.22E-31 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 PANTHER PTHR11647:SF1 1 444 2.4E-146 T 25-04-2016 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 PANTHER PTHR11647 1 444 2.4E-146 T 25-04-2016 SMD_RS14990 a57f3153ae6678f1e9418eebd44c096c 448 Pfam PF01979 Amidohydrolase family 52 429 9.2E-20 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.4E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.4E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.4E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.4E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.4E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.4E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PANTHER PTHR24322:SF328 8 136 1.4E-60 T 25-04-2016 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PANTHER PTHR24322:SF328 152 184 1.4E-60 T 25-04-2016 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 SUPERFAMILY SSF51735 4 244 5.88E-83 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 4.8E-60 T 25-04-2016 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 2.1E-118 T 25-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 5.6E-6 T 25-04-2016 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PANTHER PTHR24322 8 136 1.4E-60 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 PANTHER PTHR24322 152 184 1.4E-60 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15060 b8f937a84548f79ace38f8b8c2e7c603 246 Gene3D G3DSA:3.40.50.720 2 244 2.4E-86 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Pfam PF02938 GAD domain 306 400 6.8E-25 T 25-04-2016 IPR029351 GAD domain SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Gene3D G3DSA:3.30.930.10 409 579 1.7E-111 T 25-04-2016 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Gene3D G3DSA:3.30.930.10 129 274 1.7E-111 T 25-04-2016 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 SUPERFAMILY SSF55681 110 290 4.59E-106 T 25-04-2016 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 SUPERFAMILY SSF55681 419 580 4.59E-106 T 25-04-2016 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 578 1.5E-230 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 1.1E-12 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 SUPERFAMILY SSF50249 1 103 4.71E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 6.1E-26 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 188 200 6.1E-26 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 218 6.1E-26 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 6.1E-26 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 SUPERFAMILY SSF55261 289 415 3.49E-41 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PANTHER PTHR22594 1 295 3.6E-246 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PANTHER PTHR22594 365 566 3.6E-246 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PANTHER PTHR22594:SF5 1 295 3.6E-246 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 PANTHER PTHR22594:SF5 365 566 3.6E-246 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 553 6.1E-107 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 558 35.059 T 25-04-2016 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Gene3D G3DSA:3.30.1360.30 275 408 2.1E-47 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SMD_RS17255 165883b84c13f9fef869c5cdf240b41f 583 Gene3D G3DSA:2.40.50.140 1 104 3.1E-33 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 Gene3D G3DSA:3.60.15.10 526 739 3.3E-22 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 253 433 8.8E-22 T 25-04-2016 IPR004477 ComEC/Rec2-related protein SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 PANTHER PTHR30619 3 795 3.4E-173 T 25-04-2016 SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 SUPERFAMILY SSF56281 527 767 1.15E-35 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 143 751 2.4E-94 T 25-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 PANTHER PTHR30619:SF2 3 795 3.4E-173 T 25-04-2016 SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 SMART SM00849 539 722 1.3E-7 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 Pfam PF03772 Competence protein 231 501 7.7E-59 T 25-04-2016 IPR004477 ComEC/Rec2-related protein SMD_RS07650 51ca36d85ced3b6a494681d93da54211 799 Pfam PF13567 Domain of unknown function (DUF4131) 28 193 2.6E-17 T 25-04-2016 IPR025405 Domain of unknown function DUF4131 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 SUPERFAMILY SSF54373 269 359 3.66E-17 T 25-04-2016 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 SUPERFAMILY SSF51905 1 54 1.42E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 SUPERFAMILY SSF51905 359 416 1.42E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 SUPERFAMILY SSF51905 107 269 1.42E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 PANTHER PTHR13847:SF148 1 63 3.2E-231 T 25-04-2016 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 PANTHER PTHR13847:SF148 107 415 3.2E-231 T 25-04-2016 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 48.096 T 25-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Gene3D G3DSA:3.40.50.720 193 267 2.0E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Gene3D G3DSA:3.40.50.720 352 415 2.0E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Gene3D G3DSA:3.40.50.720 1 96 2.0E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Pfam PF01266 FAD dependent oxidoreductase 3 397 5.7E-65 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 PANTHER PTHR13847 1 63 3.2E-231 T 25-04-2016 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 PANTHER PTHR13847 107 415 3.2E-231 T 25-04-2016 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Gene3D G3DSA:3.30.9.10 136 192 4.9E-13 T 25-04-2016 SMD_RS02665 9612ab53436162500cbc5578490a599e 434 Gene3D G3DSA:3.30.9.10 268 351 4.9E-13 T 25-04-2016 SMD_RS16195 126e4268825305f3c44e305a4c5fb805 231 Pfam PF01323 DSBA-like thioredoxin domain 2 204 1.5E-38 T 25-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SMD_RS16195 126e4268825305f3c44e305a4c5fb805 231 PANTHER PTHR13887 1 211 1.2E-55 T 25-04-2016 SMD_RS16195 126e4268825305f3c44e305a4c5fb805 231 Gene3D G3DSA:3.40.30.10 1 207 1.2E-43 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS16195 126e4268825305f3c44e305a4c5fb805 231 PANTHER PTHR13887:SF10 1 211 1.2E-55 T 25-04-2016 SMD_RS16195 126e4268825305f3c44e305a4c5fb805 231 SUPERFAMILY SSF52833 1 210 1.14E-49 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 106 1.2E-20 T 25-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 701 0.0 T 25-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 SUPERFAMILY SSF51011 598 701 1.01E-8 T 25-04-2016 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 PANTHER PTHR10357 609 686 0.0 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 PANTHER PTHR10357 8 589 0.0 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 Gene3D G3DSA:3.20.20.80 165 587 4.0E-121 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 SUPERFAMILY SSF81296 15 155 2.16E-49 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 SUPERFAMILY SSF51445 508 585 1.67E-132 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 SUPERFAMILY SSF51445 147 479 1.67E-132 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 Gene3D G3DSA:2.60.40.1180 598 701 1.5E-11 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 Pfam PF00128 Alpha amylase, catalytic domain 202 313 1.6E-11 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 PANTHER PTHR10357:SF74 609 686 0.0 T 25-04-2016 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 PANTHER PTHR10357:SF74 8 589 0.0 T 25-04-2016 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 SMART SM00642 190 567 8.0E-8 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12680 2f76d68082ebac12eacc0f8d0660a8a4 706 Gene3D G3DSA:2.60.40.10 15 164 1.1E-57 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PRINTS PR00721 Stomatin signature 322 345 1.5E-12 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PRINTS PR00721 Stomatin signature 234 251 1.5E-12 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PRINTS PR00721 Stomatin signature 199 220 1.5E-12 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PRINTS PR00721 Stomatin signature 278 296 1.5E-12 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PRINTS PR00721 Stomatin signature 297 318 1.5E-12 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PRINTS PR00721 Stomatin signature 254 277 1.5E-12 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 SUPERFAMILY SSF117892 182 308 1.57E-25 T 25-04-2016 IPR001107 Band 7 domain SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PANTHER PTHR10264:SF83 64 374 1.1E-98 T 25-04-2016 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 SMART SM00244 143 302 1.1E-16 T 25-04-2016 IPR001107 Band 7 domain SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 PANTHER PTHR10264 64 374 1.1E-98 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS21165 64297c916a4d4347b467e2ddfd8c46e9 374 Pfam PF01145 SPFH domain / Band 7 family 147 319 1.0E-23 T 25-04-2016 IPR001107 Band 7 domain SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82714 719 803 1.12E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PANTHER PTHR32063 2 1031 0.0 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 25-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PANTHER PTHR32063:SF24 2 1031 0.0 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82693 275 331 5.49E-13 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82693 152 189 5.49E-13 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-32 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 Gene3D G3DSA:1.10.3850.10 282 505 3.5E-58 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 Gene3D G3DSA:1.10.3850.10 811 1026 2.7E-58 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82866 302 503 5.36E-41 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82693 42 130 1.54E-21 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82866 804 1029 6.54E-55 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 Gene3D G3DSA:3.30.70.1430 42 143 9.8E-25 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 Pfam PF00873 AcrB/AcrD/AcrF family 6 1022 2.6E-285 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82693 563 651 4.6E-5 T 25-04-2016 SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 SUPERFAMILY SSF82714 190 271 2.09E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 Gene3D G3DSA:3.30.2090.10 190 271 1.8E-19 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11220 69bdb540187b0b69628c323fd09840a0 1041 Gene3D G3DSA:3.30.2090.10 718 803 9.3E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Pfam PF00696 Amino acid kinase family 10 290 8.6E-41 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 554 566 1.1E-21 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 663 676 1.1E-21 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 741 760 1.1E-21 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 552 1.1E-21 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 842 855 1.1E-21 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01181 Diaminopimelate decarboxylase signature 552 569 4.0E-12 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01181 Diaminopimelate decarboxylase signature 852 864 4.0E-12 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01181 Diaminopimelate decarboxylase signature 638 647 4.0E-12 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PRINTS PR01181 Diaminopimelate decarboxylase signature 769 787 4.0E-12 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 694 710 - T 25-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PANTHER PTHR11482 490 860 1.5E-130 T 25-04-2016 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 SUPERFAMILY SSF53633 9 303 1.17E-57 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 SUPERFAMILY SSF55021 311 404 2.67E-12 T 25-04-2016 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 25-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 518 751 4.5E-44 T 25-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 459 4.3E-83 T 25-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 SUPERFAMILY SSF50621 731 862 1.9E-37 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PIRSF PIRSF036459 1 864 0.0 T 25-04-2016 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 PANTHER PTHR11482:SF5 490 860 1.5E-130 T 25-04-2016 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 534 552 - T 25-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 SUPERFAMILY SSF55021 388 460 1.37E-9 T 25-04-2016 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 499 860 1.9E-89 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Gene3D G3DSA:3.40.1160.10 109 304 7.8E-56 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Gene3D G3DSA:3.40.1160.10 9 60 7.8E-56 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Gene3D G3DSA:2.40.37.10 742 860 7.4E-34 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Gene3D G3DSA:3.20.20.10 520 741 6.4E-60 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 SUPERFAMILY SSF51419 505 753 1.06E-58 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS05720 b5ee338ed67a715de6a1be902b7062ba 864 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 773 860 1.8E-12 T 25-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 Pfam PF00155 Aminotransferase class I and II 45 384 2.2E-50 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 SUPERFAMILY SSF53383 8 391 3.36E-94 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 384 3.4E-138 T 25-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 PANTHER PTHR13693 12 406 4.5E-154 T 25-04-2016 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 Gene3D G3DSA:3.90.1150.10 276 388 4.8E-33 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 PANTHER PTHR13693:SF53 12 406 4.5E-154 T 25-04-2016 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 Gene3D G3DSA:3.40.640.10 61 275 1.5E-73 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS20855 ebf62bb3226562ad02989d522fe34a97 407 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 388 47.709 T 25-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SUPERFAMILY SSF54556 592 655 6.87E-13 T 25-04-2016 IPR029070 Chitinase insertion domain SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 ProSitePatterns PS01095 Chitinases family 18 active site. 458 466 - T 25-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SUPERFAMILY SSF51445 654 698 8.7E-93 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SUPERFAMILY SSF51445 295 590 8.7E-93 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SMART SM00060 200 277 2.5E-9 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SUPERFAMILY SSF49299 100 191 2.16E-5 T 25-04-2016 IPR000601 PKD domain SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 PANTHER PTHR11177 18 42 1.9E-110 T 25-04-2016 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 PANTHER PTHR11177 387 438 1.9E-110 T 25-04-2016 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 PANTHER PTHR11177 297 352 1.9E-110 T 25-04-2016 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 PANTHER PTHR11177 454 698 1.9E-110 T 25-04-2016 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SMART SM00495 46 91 8.4E-7 T 25-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 Gene3D G3DSA:3.10.50.10 594 656 1.2E-25 T 25-04-2016 IPR029070 Chitinase insertion domain SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 Gene3D G3DSA:2.60.40.10 198 286 4.7E-20 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SMART SM00636 297 684 7.0E-136 T 25-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 Pfam PF00704 Glycosyl hydrolases family 18 298 684 4.9E-86 T 25-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 Gene3D G3DSA:3.20.20.80 661 698 3.3E-108 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 Gene3D G3DSA:3.20.20.80 290 593 3.3E-108 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS03130 ef39573a16d28a26a23a48a4327778bd 699 SUPERFAMILY SSF49265 197 289 2.6E-14 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 PANTHER PTHR11879:SF11 1 400 2.0E-236 T 25-04-2016 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 PANTHER PTHR11879 1 400 2.0E-236 T 25-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 SUPERFAMILY SSF53383 2 397 5.8E-114 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 Pfam PF00155 Aminotransferase class I and II 29 394 1.7E-79 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 Gene3D G3DSA:3.40.640.10 48 318 5.5E-104 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.9E-35 T 25-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 1.9E-35 T 25-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 1.9E-35 T 25-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SMD_RS00215 bfa1f27de6c80ad09d1aadffb5079dae 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.9E-35 T 25-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SMD_RS13695 1ae0b66c74703926c61e5abc8a28ff12 117 Gene3D G3DSA:1.10.10.10 4 116 5.2E-38 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13695 1ae0b66c74703926c61e5abc8a28ff12 117 Pfam PF01638 HxlR-like helix-turn-helix 18 105 1.0E-23 T 25-04-2016 IPR002577 Helix-turn-helix, HxlR type SMD_RS13695 1ae0b66c74703926c61e5abc8a28ff12 117 SUPERFAMILY SSF46785 5 116 7.7E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13695 1ae0b66c74703926c61e5abc8a28ff12 117 PANTHER PTHR33204 1 117 2.0E-30 T 25-04-2016 SMD_RS13695 1ae0b66c74703926c61e5abc8a28ff12 117 PANTHER PTHR33204:SF7 1 117 2.0E-30 T 25-04-2016 SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 12 237 8.3E-54 T 25-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 Gene3D G3DSA:3.40.710.10 12 250 3.1E-71 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 92 109 6.8E-17 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 132 6.8E-17 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 36 47 6.8E-17 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 PANTHER PTHR21581 14 242 3.1E-55 T 25-04-2016 SMD_RS19880 525a5ec590a12d4a9d57d6177190a1d3 264 SUPERFAMILY SSF56601 11 253 1.65E-57 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 140 158 1.6E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 68 86 1.6E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 SMART SM00382 64 212 3.4E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 68 211 1.9E-24 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 Gene3D G3DSA:3.40.50.300 29 227 4.3E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 PANTHER PTHR23077:SF10 17 304 5.5E-37 T 25-04-2016 SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 PANTHER PTHR23077 17 304 5.5E-37 T 25-04-2016 SMD_RS07980 6f7827e988e0e55dbee40f614fc98000 304 SUPERFAMILY SSF52540 29 293 6.49E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 Gene3D G3DSA:3.30.590.10 106 456 1.2E-132 T 25-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 1.9E-194 T 25-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 PANTHER PTHR20852 161 469 1.2E-259 T 25-04-2016 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 PANTHER PTHR20852 1 138 1.2E-259 T 25-04-2016 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 25-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 SUPERFAMILY SSF54368 3 101 3.4E-35 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 25-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 Gene3D G3DSA:3.10.20.70 3 105 3.2E-37 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 SMART SM01230 102 379 1.8E-140 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 9.6E-133 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 PANTHER PTHR20852:SF15 161 469 1.2E-259 T 25-04-2016 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 PANTHER PTHR20852:SF15 1 138 1.2E-259 T 25-04-2016 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 SUPERFAMILY SSF55931 103 467 5.49E-132 T 25-04-2016 SMD_RS00660 62d33dbb57faed94bcb5b6538a306d95 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.0E-28 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS04670 9afcb90cd1244fa87819443226dc2c97 598 Gene3D G3DSA:3.40.50.300 251 310 1.4E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04670 9afcb90cd1244fa87819443226dc2c97 598 Gene3D G3DSA:3.40.50.300 452 568 1.4E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04670 9afcb90cd1244fa87819443226dc2c97 598 Gene3D G3DSA:3.40.50.300 44 92 1.4E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04670 9afcb90cd1244fa87819443226dc2c97 598 Gene3D G3DSA:3.40.50.300 398 399 1.4E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04670 9afcb90cd1244fa87819443226dc2c97 598 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 455 595 1.8E-33 T 25-04-2016 IPR018760 Protein of unknown function DUF2326 SMD_RS16315 1804ea55a58380094aa109e14c6ff67f 567 PANTHER PTHR33908:SF3 5 547 9.2E-99 T 25-04-2016 SMD_RS16315 1804ea55a58380094aa109e14c6ff67f 567 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 65 226 7.7E-16 T 25-04-2016 SMD_RS16315 1804ea55a58380094aa109e14c6ff67f 567 PANTHER PTHR33908 5 547 9.2E-99 T 25-04-2016 SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 TIGRFAM TIGR00444 mazG: MazG family protein 23 274 5.2E-94 T 25-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 182 243 5.3E-9 T 25-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 40 113 6.9E-29 T 25-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 PANTHER PTHR30522 1 279 1.4E-117 T 25-04-2016 SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 SUPERFAMILY SSF101386 151 254 5.23E-26 T 25-04-2016 SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 Gene3D G3DSA:1.10.287.1080 147 235 6.8E-14 T 25-04-2016 SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 Gene3D G3DSA:1.10.287.1080 34 87 6.5E-8 T 25-04-2016 SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 SUPERFAMILY SSF101386 16 118 4.3E-25 T 25-04-2016 SMD_RS16730 ecabe2ae82a7b33a81de8b65e0f6f6e4 279 PANTHER PTHR30522:SF0 1 279 1.4E-117 T 25-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 Gene3D G3DSA:3.90.1310.10 133 231 3.0E-29 T 25-04-2016 SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 SUPERFAMILY SSF56519 58 224 2.75E-46 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 Gene3D G3DSA:3.40.710.10 232 551 4.7E-88 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 PANTHER PTHR30627:SF1 3 586 4.5E-223 T 25-04-2016 SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 1.0E-79 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 209 1.9E-19 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 SUPERFAMILY SSF56601 178 566 2.32E-92 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS03435 5a40fe3cc47d0a778deca98f6379c2df 614 PANTHER PTHR30627 3 586 4.5E-223 T 25-04-2016 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Gene3D G3DSA:3.10.196.10 627 894 3.1E-106 T 25-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 SUPERFAMILY SSF47644 317 404 9.15E-28 T 25-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Gene3D G3DSA:3.40.50.280 413 563 9.0E-64 T 25-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Gene3D G3DSA:1.10.1240.10 316 402 2.0E-36 T 25-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 SUPERFAMILY SSF56507 571 894 1.57E-129 T 25-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 608 875 8.4E-122 T 25-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Pfam PF00809 Pterin binding enzyme 27 265 2.4E-59 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 TIGRFAM TIGR02082 metH: methionine synthase 6 859 0.0 T 25-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 SUPERFAMILY SSF52242 411 563 3.14E-45 T 25-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 PIRSF PIRSF000381 1 862 0.0 T 25-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 SUPERFAMILY SSF51717 23 297 6.02E-88 T 25-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Pfam PF02310 B12 binding domain 417 507 2.1E-20 T 25-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Pfam PF02607 B12 binding domain 324 397 1.6E-26 T 25-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 SMART SM01018 322 405 1.4E-43 T 25-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMD_RS14370 8bcf8223c25dae53079f032fc649d426 894 Gene3D G3DSA:3.20.20.20 23 303 2.6E-113 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMD_RS19590 4fac8efe020a6194600538efec46e7df 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 34.362 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMD_RS19590 4fac8efe020a6194600538efec46e7df 146 Gene3D G3DSA:3.50.80.10 1 144 2.7E-54 T 25-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SMD_RS19590 4fac8efe020a6194600538efec46e7df 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 4.7E-53 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMD_RS19590 4fac8efe020a6194600538efec46e7df 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 144 7.6E-52 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMD_RS19590 4fac8efe020a6194600538efec46e7df 146 SUPERFAMILY SSF69500 1 144 1.31E-52 T 25-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SMD_RS19590 4fac8efe020a6194600538efec46e7df 146 PANTHER PTHR10472 3 144 2.9E-70 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 SMART SM00155 400 427 5.2E-5 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 SMART SM00155 219 246 6.0E-4 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 Pfam PF13091 PLD-like domain 329 457 3.2E-26 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 Pfam PF13091 PLD-like domain 134 247 3.2E-14 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 Gene3D G3DSA:3.30.870.10 323 460 5.7E-34 T 25-04-2016 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 Gene3D G3DSA:3.30.870.10 112 321 3.7E-49 T 25-04-2016 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 19 486 9.8E-111 T 25-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 SUPERFAMILY SSF56024 88 317 1.92E-49 T 25-04-2016 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 PANTHER PTHR21248 28 486 1.3E-105 T 25-04-2016 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 PANTHER PTHR21248:SF5 28 486 1.3E-105 T 25-04-2016 SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 28 69 9.1E-7 T 25-04-2016 IPR027379 Cardiolipin synthase N-terminal SMD_RS00170 092b12dd8f19df371f0064121cf4d595 486 SUPERFAMILY SSF56024 270 461 9.64E-44 T 25-04-2016 SMD_RS17730 c148d83baef375996949a269c14676b8 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 92 1.4E-19 T 25-04-2016 IPR007711 Toxin HigB-1 SMD_RS17730 c148d83baef375996949a269c14676b8 92 SUPERFAMILY SSF143011 1 92 1.37E-14 T 25-04-2016 SMD_RS17730 c148d83baef375996949a269c14676b8 92 PANTHER PTHR40266 1 92 9.1E-18 T 25-04-2016 SMD_RS17730 c148d83baef375996949a269c14676b8 92 PANTHER PTHR40266:SF2 1 92 9.1E-18 T 25-04-2016 SMD_RS12620 de29e4b30667125699cc0d70e74a9303 175 Pfam PF04612 Type II secretion system (T2SS), protein M 15 156 9.6E-21 T 25-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 PANTHER PTHR10108:SF915 278 357 2.3E-151 T 25-04-2016 SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 PANTHER PTHR10108:SF915 2 262 2.3E-151 T 25-04-2016 SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 Gene3D G3DSA:3.40.50.150 74 352 3.1E-79 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 SUPERFAMILY SSF53335 79 349 2.3E-57 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 Pfam PF02353 Mycolic acid cyclopropane synthetase 77 340 1.5E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 PANTHER PTHR10108 278 357 2.3E-151 T 25-04-2016 SMD_RS11290 a871de76d17c5a880d626245efc426a0 357 PANTHER PTHR10108 2 262 2.3E-151 T 25-04-2016 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 8.2E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 SMART SM00387 27 173 1.2E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 SMART SM00433 34 623 1.2E-211 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 1.2E-22 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Pfam PF01751 Toprim domain 412 519 5.0E-12 T 25-04-2016 IPR006171 Toprim domain SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 SUPERFAMILY SSF56719 387 620 1.99E-75 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 6.1E-94 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 SUPERFAMILY SSF55874 4 215 1.44E-68 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Gene3D G3DSA:3.40.50.670 397 610 1.1E-74 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Pfam PF00204 DNA gyrase B 218 383 7.3E-37 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 SUPERFAMILY SSF54211 217 380 4.93E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.581 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 624 1.0E-291 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Gene3D G3DSA:3.30.230.10 216 389 2.5E-43 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 1.5E-57 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 Gene3D G3DSA:3.30.565.10 15 214 2.7E-76 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PANTHER PTHR10169 1 623 0.0 T 25-04-2016 SMD_RS08735 ea73b0f2fb727c1504e2fd9e8dd1e44d 629 PANTHER PTHR10169:SF45 1 623 0.0 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1031 0.0 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82693 274 330 2.09E-21 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82693 38 131 1.88E-23 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82714 727 812 1.31E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82693 813 861 3.66E-23 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1046 0.0 T 25-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Gene3D G3DSA:3.30.2090.10 181 275 1.6E-26 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Gene3D G3DSA:3.30.2090.10 727 815 2.5E-22 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82693 677 726 3.66E-23 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82714 182 272 3.14E-21 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82693 575 676 2.07E-27 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Gene3D G3DSA:1.10.3850.10 819 1032 5.5E-54 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Gene3D G3DSA:1.10.3850.10 278 496 8.7E-54 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Gene3D G3DSA:3.30.70.1430 38 137 6.2E-30 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82866 296 494 1.57E-45 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PANTHER PTHR32063 1 1034 0.0 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82866 839 1031 5.36E-42 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 629 643 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.8E-103 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 Gene3D G3DSA:3.30.70.1430 577 675 3.4E-29 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 PANTHER PTHR32063:SF13 1 1034 0.0 T 25-04-2016 SMD_RS20900 6c196463376c2371174b3fa84f401927 1049 SUPERFAMILY SSF82693 136 182 2.09E-21 T 25-04-2016 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 SUPERFAMILY SSF53927 10 161 2.01E-53 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 PANTHER PTHR11079 13 169 3.7E-38 T 25-04-2016 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 PANTHER PTHR11079:SF72 13 169 3.7E-38 T 25-04-2016 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 Gene3D G3DSA:3.40.140.10 11 158 1.1E-54 T 25-04-2016 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 17 160 45.745 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 112 2.0E-25 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMD_RS13690 c081d5161611ad9b341bf08be893e2a0 174 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 64 101 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 Gene3D G3DSA:3.40.640.10 59 303 5.3E-89 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 PANTHER PTHR11986:SF79 12 408 5.3E-180 T 25-04-2016 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 401 4.0E-141 T 25-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 SUPERFAMILY SSF53383 11 401 3.72E-124 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 Gene3D G3DSA:3.90.1150.10 16 58 8.5E-35 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 Gene3D G3DSA:3.90.1150.10 308 403 8.5E-35 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 PANTHER PTHR11986 12 408 5.3E-180 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 402 44.817 T 25-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SMD_RS18040 36a8d4352e536a50c1f4ef5a442667e4 408 Pfam PF00202 Aminotransferase class-III 20 401 3.3E-116 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS09235 4c385ae2d2f9a8c2e4a7add40ae43823 93 Gene3D G3DSA:3.30.70.20 6 74 4.7E-17 T 25-04-2016 SMD_RS09235 4c385ae2d2f9a8c2e4a7add40ae43823 93 Pfam PF00037 4Fe-4S binding domain 5 24 1.7E-5 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS09235 4c385ae2d2f9a8c2e4a7add40ae43823 93 SUPERFAMILY SSF54862 6 75 1.52E-18 T 25-04-2016 SMD_RS09235 4c385ae2d2f9a8c2e4a7add40ae43823 93 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS09235 4c385ae2d2f9a8c2e4a7add40ae43823 93 PANTHER PTHR24960:SF38 2 89 2.5E-31 T 25-04-2016 SMD_RS09235 4c385ae2d2f9a8c2e4a7add40ae43823 93 PANTHER PTHR24960 2 89 2.5E-31 T 25-04-2016 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.0E-58 T 25-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 25-04-2016 IPR019972 Ribosomal protein L14P, conserved site SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 PANTHER PTHR11761 1 122 6.3E-76 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 SUPERFAMILY SSF50193 1 122 2.75E-52 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 Gene3D G3DSA:2.40.150.20 1 122 2.4E-55 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 SMART SM01374 1 122 6.1E-86 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.955 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMD_RS04220 c85e2c393b1a8db40d750e1fcef247f1 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.2E-55 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 Gene3D G3DSA:3.40.50.1100 148 308 1.5E-71 T 25-04-2016 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 Gene3D G3DSA:3.40.50.1100 2 41 1.5E-71 T 25-04-2016 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 7.3E-124 T 25-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 PANTHER PTHR10314 3 306 1.6E-122 T 25-04-2016 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 PANTHER PTHR10314:SF56 3 306 1.6E-122 T 25-04-2016 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 5.5E-131 T 25-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 SUPERFAMILY SSF53686 2 305 5.89E-95 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 25-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 4.2E-65 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS17635 781dd2433dac799a1e1efc8b0e9897f5 319 Gene3D G3DSA:3.40.50.1100 42 142 6.0E-41 T 25-04-2016 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 Hamap MF_00455 Xylose isomerase [xylA]. 19 442 51.891 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 Gene3D G3DSA:3.20.20.150 10 443 2.6E-192 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 442 5.0E-203 T 25-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PANTHER PTHR32176:SF0 1 444 1.0E-253 T 25-04-2016 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 SUPERFAMILY SSF51658 11 443 9.17E-160 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 187 208 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 339 350 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 278 305 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 140 160 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 214 233 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 99 121 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 163 182 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 307 318 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PRINTS PR00688 Xylose isomerase signature 236 260 3.6E-76 T 25-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 SMD_RS11765 386fda3b021aedd0c6cc9a914006e621 444 PANTHER PTHR32176 1 444 1.0E-253 T 25-04-2016 SMD_RS12340 25951d5d923a540aaea644286f08f0df 205 Pfam PF11736 Protein of unknown function (DUF3299) 89 201 4.1E-36 T 25-04-2016 IPR021727 Protein of unknown function DUF3299 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 Pfam PF13667 ThiC-associated domain 22 99 9.9E-31 T 25-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 590 3.5E-214 T 25-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 PANTHER PTHR30557:SF1 131 161 0.0 T 25-04-2016 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 PANTHER PTHR30557:SF1 18 97 0.0 T 25-04-2016 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 PANTHER PTHR30557:SF1 189 613 0.0 T 25-04-2016 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 PANTHER PTHR30557 131 161 0.0 T 25-04-2016 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 PANTHER PTHR30557 18 97 0.0 T 25-04-2016 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 PANTHER PTHR30557 189 613 0.0 T 25-04-2016 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 592 56.016 T 25-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMD_RS18220 2e99089110883e64caa4962bb41aca38 614 Pfam PF01964 Radical SAM ThiC family 139 586 6.3E-200 T 25-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 SUPERFAMILY SSF52540 2 229 5.33E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 PANTHER PTHR24220 3 250 1.7E-104 T 25-04-2016 SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 PANTHER PTHR24220:SF571 3 250 1.7E-104 T 25-04-2016 SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 Pfam PF00005 ABC transporter 18 167 5.3E-26 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 Gene3D G3DSA:3.40.50.300 1 234 1.2E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05805 ef4969b46b35b554170153d30a13715f 300 SMART SM00382 26 222 3.4E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Pfam PF00072 Response regulator receiver domain 533 650 3.3E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 4.4E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 453 4.4E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 498 4.4E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 4.4E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SMART SM00091 135 201 3.0E-8 T 25-04-2016 IPR000014 PAS domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SUPERFAMILY SSF55874 331 503 5.37E-48 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Gene3D G3DSA:1.10.287.130 269 337 1.9E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SUPERFAMILY SSF55785 120 247 7.5E-25 T 25-04-2016 IPR000014 PAS domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SMART SM00448 531 649 2.1E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 PANTHER PTHR24423 27 651 1.3E-201 T 25-04-2016 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SUPERFAMILY SSF52172 529 652 5.27E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Pfam PF08447 PAS fold 159 241 4.7E-13 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 499 4.8E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SUPERFAMILY SSF47384 261 339 1.37E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 PANTHER PTHR24423:SF522 27 651 1.3E-201 T 25-04-2016 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Gene3D G3DSA:3.30.450.20 122 247 9.3E-26 T 25-04-2016 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SMART SM00086 207 249 0.001 T 25-04-2016 IPR001610 PAC motif SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SUPERFAMILY SSF55785 36 130 7.85E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Pfam PF13188 PAS domain 12 73 2.6E-4 T 25-04-2016 IPR000014 PAS domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SMART SM00388 276 342 2.7E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 339 3.4E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Gene3D G3DSA:3.40.50.2300 529 652 6.9E-32 T 25-04-2016 SMD_RS02680 534c52f1732333d677c8843547469d9f 662 SMART SM00387 388 501 5.7E-43 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Gene3D G3DSA:3.30.565.10 343 504 3.0E-46 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 38 130 4.6E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 254 1.5E-17 T 25-04-2016 IPR000014 PAS domain SMD_RS02680 534c52f1732333d677c8843547469d9f 662 Gene3D G3DSA:3.30.450.20 13 121 1.1E-9 T 25-04-2016 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 72 86 - T 25-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 Pfam PF01678 Diaminopimelate epimerase 11 129 2.5E-23 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 Pfam PF01678 Diaminopimelate epimerase 161 275 1.3E-24 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 PANTHER PTHR31689 3 281 1.5E-108 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 9 283 35.636 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 10 281 1.1E-74 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 SUPERFAMILY SSF54506 9 138 8.89E-39 T 25-04-2016 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 Gene3D G3DSA:3.10.310.10 127 270 7.5E-47 T 25-04-2016 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 Gene3D G3DSA:3.10.310.10 6 126 5.5E-46 T 25-04-2016 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 PANTHER PTHR31689:SF0 3 281 1.5E-108 T 25-04-2016 SMD_RS18975 baa2ffa74e13863b4525d8dfab32eb83 283 SUPERFAMILY SSF54506 147 281 1.57E-44 T 25-04-2016 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 PANTHER PTHR26402:SF531 20 247 5.6E-77 T 25-04-2016 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 SMART SM00862 171 245 2.5E-16 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 Gene3D G3DSA:3.40.50.2300 21 138 4.1E-38 T 25-04-2016 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 SUPERFAMILY SSF46894 146 247 1.53E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 Pfam PF00072 Response regulator receiver domain 22 130 1.2E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 245 7.9E-16 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 SMART SM00448 20 130 6.5E-38 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 SUPERFAMILY SSF52172 20 140 1.14E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 Gene3D G3DSA:1.10.10.10 145 247 2.8E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10435 c7f134c926acc00ccc46d71144fe6ae5 249 PANTHER PTHR26402 20 247 5.6E-77 T 25-04-2016 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 Pfam PF08502 LeuA allosteric (dimerisation) domain 382 509 2.6E-27 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 211 224 - T 25-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 Gene3D G3DSA:3.20.20.70 6 358 7.0E-138 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 25-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 SMART SM00917 381 509 9.2E-28 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 SUPERFAMILY SSF110921 421 508 2.48E-19 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 Pfam PF00682 HMGL-like 11 284 3.1E-87 T 25-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 PANTHER PTHR10277:SF9 11 517 3.6E-230 T 25-04-2016 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 SUPERFAMILY SSF51569 6 303 4.21E-91 T 25-04-2016 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 PANTHER PTHR10277 11 517 3.6E-230 T 25-04-2016 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 506 1.5E-189 T 25-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS18260 94e3f7e87366e1a2ae165b90c48a247b 528 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 518 39.666 T 25-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 SMART SM00245 182 374 1.1E-71 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 Gene3D G3DSA:2.30.42.10 116 191 3.7E-24 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 64 379 8.5E-95 T 25-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 SMART SM00228 110 180 1.9E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 SUPERFAMILY SSF50156 111 190 1.8E-14 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 Gene3D G3DSA:3.30.750.44 60 115 5.7E-7 T 25-04-2016 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 PANTHER PTHR32060 63 445 5.6E-117 T 25-04-2016 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 Pfam PF13180 PDZ domain 111 189 3.3E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 Gene3D G3DSA:3.90.226.10 192 376 1.2E-62 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 SUPERFAMILY SSF52096 43 130 4.64E-74 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 SUPERFAMILY SSF52096 201 376 4.64E-74 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01990 ed17fe3638d8e4ce9f2cdf490ee68f9b 494 Pfam PF03572 Peptidase family S41 208 372 7.9E-55 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PANTHER PTHR11751:SF406 555 678 3.1E-162 T 25-04-2016 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 390 404 - T 25-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PANTHER PTHR11751 148 493 3.1E-162 T 25-04-2016 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 147 593 1.4E-161 T 25-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 SUPERFAMILY SSF53383 147 611 7.81E-113 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PANTHER PTHR11751:SF406 148 493 3.1E-162 T 25-04-2016 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 Gene3D G3DSA:3.40.640.10 147 454 1.7E-114 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PANTHER PTHR11751:SF406 530 538 3.1E-162 T 25-04-2016 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 Gene3D G3DSA:3.90.100.10 636 761 1.9E-32 T 25-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 SUPERFAMILY SSF55904 613 760 7.32E-41 T 25-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 618 748 2.9E-48 T 25-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PIRSF PIRSF009393 9 762 1.4E-278 T 25-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 Gene3D G3DSA:3.90.1150.10 457 635 2.3E-63 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PANTHER PTHR11751 555 678 3.1E-162 T 25-04-2016 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 PANTHER PTHR11751 530 538 3.1E-162 T 25-04-2016 SMD_RS13490 4134d83266d0d0ee03cd1a334a340c5c 762 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 27 141 1.5E-25 T 25-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 Gene3D G3DSA:3.40.50.300 74 347 5.2E-108 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 Gene3D G3DSA:2.40.10.170 1 72 1.8E-28 T 25-04-2016 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 Gene3D G3DSA:1.10.1140.10 350 466 1.8E-56 T 25-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.1E-61 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 2.4E-253 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 SMART SM00382 140 323 0.0016 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.562 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 SUPERFAMILY SSF50615 1 72 1.91E-24 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 PANTHER PTHR15184 1 466 0.0 T 25-04-2016 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 SUPERFAMILY SSF47917 349 465 9.94E-55 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 PANTHER PTHR15184:SF44 1 466 0.0 T 25-04-2016 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 1.2E-19 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 SUPERFAMILY SSF52540 75 352 3.87E-90 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19140 1b2a2b5d9dac6fab9161057c67469099 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 PANTHER PTHR32089 1 115 8.0E-20 T 25-04-2016 SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 Gene3D G3DSA:3.30.450.20 19 114 1.2E-24 T 25-04-2016 SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 116 4.6E-15 T 25-04-2016 IPR000014 PAS domain SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 PANTHER PTHR32089:SF52 1 115 8.0E-20 T 25-04-2016 SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 SMART SM00091 5 73 8.0E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 Pfam PF00989 PAS fold 20 113 4.4E-13 T 25-04-2016 IPR013767 PAS fold GO:0006355 SMD_RS12710 9a35e765003ef8d09cd87253adafdae8 142 SUPERFAMILY SSF55785 19 115 2.44E-28 T 25-04-2016 IPR000014 PAS domain SMD_RS09925 1372992e4989619fde311a820d472550 151 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 134 1.1E-11 T 25-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 SMD_RS09925 1372992e4989619fde311a820d472550 151 Gene3D G3DSA:3.30.530.20 3 143 7.0E-30 T 25-04-2016 IPR023393 START-like domain SMD_RS09925 1372992e4989619fde311a820d472550 151 SUPERFAMILY SSF55961 2 142 1.61E-27 T 25-04-2016 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 Hamap MF_01895 Ribonuclease R [rnr]. 112 791 58.124 T 25-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 PANTHER PTHR23355:SF9 78 796 3.4E-250 T 25-04-2016 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SUPERFAMILY SSF50249 212 311 7.71E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SMART SM00357 160 219 2.1E-13 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 154 791 1.7E-216 T 25-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 TIGRFAM TIGR02063 RNase_R: ribonuclease R 93 792 1.4E-263 T 25-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 Pfam PF08206 Ribonuclease B OB domain 161 218 7.3E-21 T 25-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 ProSitePatterns PS01175 Ribonuclease II family signature. 629 653 - T 25-04-2016 IPR022966 Ribonuclease II/R, conserved site SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 PANTHER PTHR23355 78 796 3.4E-250 T 25-04-2016 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SUPERFAMILY SSF50249 141 221 1.09E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SUPERFAMILY SSF50249 711 790 4.7E-19 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 Gene3D G3DSA:2.40.50.140 712 792 6.2E-19 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SMART SM00955 334 662 1.7E-175 T 25-04-2016 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 Pfam PF00575 S1 RNA binding domain 709 788 2.4E-11 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 Pfam PF00773 RNB domain 334 661 7.3E-105 T 25-04-2016 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SMART SM00316 708 791 1.6E-12 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS07165 3526f74587dd99a8efb9e82464baabd8 819 SUPERFAMILY SSF50249 299 708 1.26E-139 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PANTHER PTHR11985 2 491 4.3E-154 T 25-04-2016 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 Gene3D G3DSA:3.50.50.60 2 241 1.1E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 Gene3D G3DSA:3.50.50.60 273 341 1.1E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PANTHER PTHR11985:SF1 2 491 4.3E-154 T 25-04-2016 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-27 T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-27 T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-27 T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 4.8E-27 T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 316 322 4.8E-27 T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-27 T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 Pfam PF01266 FAD dependent oxidoreductase 5 330 8.6E-42 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 SUPERFAMILY SSF51905 2 299 2.96E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19205 66668c10feb52bd86a2a9431968cc3a1 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 25-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 SUPERFAMILY SSF47384 67 142 1.79E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 SUPERFAMILY SSF55874 148 294 1.31E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 SMART SM00387 186 295 7.4E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 222 236 4.6E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 292 4.6E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 255 273 4.6E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 Pfam PF00512 His Kinase A (phospho-acceptor) domain 79 142 2.6E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 187 294 9.1E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 PANTHER PTHR24423 68 295 1.4E-55 T 25-04-2016 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 SMART SM00388 77 144 6.0E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 Gene3D G3DSA:3.30.565.10 149 295 4.9E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04775 34ddaf942ce2dc81b48963f7a0b9b19e 295 Gene3D G3DSA:1.10.287.130 70 140 6.3E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 Gene3D G3DSA:3.30.390.10 3 126 6.3E-55 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 Hamap MF_00318 Enolase [eno]. 2 413 44.113 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 Gene3D G3DSA:3.20.20.120 130 426 8.1E-129 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PRINTS PR00148 Enolase signature 163 176 9.8E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PRINTS PR00148 Enolase signature 107 123 9.8E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PRINTS PR00148 Enolase signature 37 51 9.8E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PRINTS PR00148 Enolase signature 365 382 9.8E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PRINTS PR00148 Enolase signature 336 350 9.8E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PRINTS PR00148 Enolase signature 313 324 9.8E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 Pfam PF03952 Enolase, N-terminal domain 4 134 8.0E-58 T 25-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 SUPERFAMILY SSF51604 143 427 1.84E-125 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 25-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 SMART SM01192 141 427 6.2E-217 T 25-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 SMART SM01193 4 134 1.1E-92 T 25-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 2.2E-202 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PIRSF PIRSF001400 1 427 2.8E-185 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 425 4.4E-131 T 25-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 PANTHER PTHR11902 1 423 2.8E-257 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08765 a4eda243d303772beb4683cd96dd70ab 430 SUPERFAMILY SSF54826 4 136 5.08E-54 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PIRSF PIRSF002097 2 90 6.5E-34 T 25-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PRINTS PR01591 DNA-binding protein FIS signature 49 61 3.42E-8 T 25-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PRINTS PR01591 DNA-binding protein FIS signature 18 34 3.42E-8 T 25-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PRINTS PR01591 DNA-binding protein FIS signature 34 49 3.42E-8 T 25-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PANTHER PTHR32071 14 91 8.0E-24 T 25-04-2016 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 SUPERFAMILY SSF46689 13 89 1.25E-22 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 Gene3D G3DSA:1.10.10.60 19 89 1.0E-25 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 2.0E-12 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 2.0E-12 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS19950 89dab68e15d609519832c43e8574dd21 91 Pfam PF02954 Bacterial regulatory protein, Fis family 47 87 4.4E-14 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 SUPERFAMILY SSF46955 1 111 2.16E-26 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 SMART SM00422 1 69 2.5E-19 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.4E-6 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-6 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-6 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 PANTHER PTHR30204 1 129 1.3E-31 T 25-04-2016 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 Gene3D G3DSA:1.10.1660.10 1 56 3.0E-22 T 25-04-2016 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 PANTHER PTHR30204:SF30 1 129 1.3E-31 T 25-04-2016 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 Gene3D G3DSA:1.10.1660.10 57 117 1.3E-10 T 25-04-2016 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 Pfam PF13411 MerR HTH family regulatory protein 1 66 2.5E-16 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13825 71fe58be09a253f505966dc718abb2bc 159 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 139 294 7.2E-7 T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 Gene3D G3DSA:3.40.50.920 711 893 4.0E-75 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 SUPERFAMILY SSF52518 60 471 1.47E-135 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 Gene3D G3DSA:3.40.50.970 59 471 1.5E-147 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 SUPERFAMILY SSF52518 479 704 8.54E-90 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 SUPERFAMILY SSF52922 706 893 9.77E-60 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 Gene3D G3DSA:3.40.50.970 478 709 6.0E-108 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PIRSF PIRSF000156 1 895 0.0 T 25-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624:SF67 558 775 0.0 T 25-04-2016 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624:SF67 485 540 0.0 T 25-04-2016 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624:SF67 365 454 0.0 T 25-04-2016 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624:SF67 794 877 0.0 T 25-04-2016 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624:SF67 77 296 0.0 T 25-04-2016 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 893 0.0 T 25-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624 558 775 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624 485 540 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624 365 454 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624 794 877 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS02295 c47d1fd03e07c8281c6debc2c83978c5 895 PANTHER PTHR11624 77 296 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.099 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 Gene3D G3DSA:3.60.20.10 2 256 1.3E-60 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 PANTHER PTHR11907:SF0 1 476 1.9E-241 T 25-04-2016 SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 SUPERFAMILY SSF56235 2 255 1.2E-67 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 PANTHER PTHR11907 1 476 1.9E-241 T 25-04-2016 SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 Gene3D G3DSA:3.40.50.2020 270 439 1.3E-41 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 PIRSF PIRSF000485 1 476 8.5E-157 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 SUPERFAMILY SSF53271 248 473 1.88E-69 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 Pfam PF13522 Glutamine amidotransferase domain 58 206 1.2E-16 T 25-04-2016 SMD_RS04450 3a35025d5082309c180568c2f9c6cc28 488 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 7.0E-162 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 SUPERFAMILY SSF57716 143 194 1.66E-13 T 25-04-2016 SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 Gene3D G3DSA:3.40.50.300 10 90 9.8E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 PANTHER PTHR11441 1 206 2.0E-72 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 Pfam PF00265 Thymidine kinase 2 185 2.9E-48 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 PIRSF PIRSF035805 1 199 4.5E-51 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 SUPERFAMILY SSF52540 1 142 1.15E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 Gene3D G3DSA:3.30.60.20 143 189 2.5E-11 T 25-04-2016 SMD_RS00340 02dce193f494d39ed7d65959e7591360 206 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 33.509 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMD_RS21820 b23edd52b5a6ee15ca70ac5f9d7fcb27 679 PANTHER PTHR30509 1 246 2.9E-133 T 25-04-2016 SMD_RS21820 b23edd52b5a6ee15ca70ac5f9d7fcb27 679 PANTHER PTHR30509 308 643 2.9E-133 T 25-04-2016 SMD_RS21820 b23edd52b5a6ee15ca70ac5f9d7fcb27 679 PANTHER PTHR30509:SF1 1 246 2.9E-133 T 25-04-2016 SMD_RS21820 b23edd52b5a6ee15ca70ac5f9d7fcb27 679 PANTHER PTHR30509:SF1 308 643 2.9E-133 T 25-04-2016 SMD_RS21820 b23edd52b5a6ee15ca70ac5f9d7fcb27 679 Pfam PF04632 Fusaric acid resistance protein family 9 666 8.7E-201 T 25-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 SMD_RS21070 3bc258f65b6ff79e4c52053258ffda87 394 PANTHER PTHR30294 1 392 5.2E-77 T 25-04-2016 SMD_RS21070 3bc258f65b6ff79e4c52053258ffda87 394 PANTHER PTHR30294:SF10 1 392 5.2E-77 T 25-04-2016 SMD_RS21070 3bc258f65b6ff79e4c52053258ffda87 394 Pfam PF12698 ABC-2 family transporter protein 24 381 8.0E-22 T 25-04-2016 SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 SUPERFAMILY SSF47336 2 77 7.85E-24 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.4E-36 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-17 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 Gene3D G3DSA:1.10.1200.10 3 77 4.6E-36 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 PANTHER PTHR20863 4 73 1.7E-30 T 25-04-2016 SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.69 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMD_RS05170 aaebb1d43b9ea0a9a3a27f66970dd9b1 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 25-04-2016 IPR006162 Phosphopantetheine attachment site SMD_RS07400 acdceafa6b69971195e06f02732aaf07 310 PANTHER PTHR30193 7 310 5.5E-119 T 25-04-2016 SMD_RS07400 acdceafa6b69971195e06f02732aaf07 310 PANTHER PTHR30193:SF5 7 310 5.5E-119 T 25-04-2016 SMD_RS07400 acdceafa6b69971195e06f02732aaf07 310 Gene3D G3DSA:1.10.3720.10 13 299 5.9E-57 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07400 acdceafa6b69971195e06f02732aaf07 310 SUPERFAMILY SSF161098 15 300 1.59E-56 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07400 acdceafa6b69971195e06f02732aaf07 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 304 2.0E-18 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 PANTHER PTHR18901 7 211 2.5E-97 T 25-04-2016 SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 215 5.5E-71 T 25-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 SUPERFAMILY SSF56784 8 212 2.67E-54 T 25-04-2016 IPR023214 HAD-like domain SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 PANTHER PTHR18901:SF24 7 211 2.5E-97 T 25-04-2016 SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 182 4.2E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 188 2.2E-30 T 25-04-2016 IPR023214 HAD-like domain SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 Gene3D G3DSA:3.40.50.1000 78 214 3.4E-35 T 25-04-2016 IPR023214 HAD-like domain SMD_RS15005 810c499abe3379256e559b331d2e5ba5 231 Gene3D G3DSA:1.10.150.240 22 77 6.2E-6 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 SUPERFAMILY SSF53850 76 304 2.23E-40 T 25-04-2016 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 Gene3D G3DSA:3.40.190.10 156 258 1.3E-21 T 25-04-2016 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 PANTHER PTHR18966 97 304 1.8E-14 T 25-04-2016 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 PANTHER PTHR18966:SF191 97 304 1.8E-14 T 25-04-2016 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 SMART SM00062 77 308 8.8E-23 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 Gene3D G3DSA:3.40.190.10 268 305 1.7E-23 T 25-04-2016 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 Gene3D G3DSA:3.40.190.10 78 155 1.7E-23 T 25-04-2016 SMD_RS10030 f4f255f06f81b852ac11b88d4b104830 325 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 79 304 7.1E-36 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS21545 56d944148ac7473e130bb3570d887089 255 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 254 1.5E-81 T 25-04-2016 SMD_RS21545 56d944148ac7473e130bb3570d887089 255 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 25-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMD_RS21545 56d944148ac7473e130bb3570d887089 255 PANTHER PTHR22748:SF7 1 254 1.5E-114 T 25-04-2016 SMD_RS21545 56d944148ac7473e130bb3570d887089 255 SUPERFAMILY SSF56219 1 254 3.27E-77 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS21545 56d944148ac7473e130bb3570d887089 255 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 7.7E-75 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMD_RS21545 56d944148ac7473e130bb3570d887089 255 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMD_RS21545 56d944148ac7473e130bb3570d887089 255 Gene3D G3DSA:3.60.10.10 1 254 9.9E-81 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS21545 56d944148ac7473e130bb3570d887089 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 1.6E-22 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS21545 56d944148ac7473e130bb3570d887089 255 PANTHER PTHR22748 1 254 1.5E-114 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 SUPERFAMILY SSF52833 8 104 4.9E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 Pfam PF00462 Glutaredoxin 20 84 4.0E-19 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 Gene3D G3DSA:3.40.30.10 11 103 1.0E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 Gene3D G3DSA:2.60.300.12 111 199 3.0E-7 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 Pfam PF00581 Rhodanese-like domain 212 300 1.0E-9 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 SUPERFAMILY SSF52821 201 303 3.14E-21 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 PANTHER PTHR10293 3 103 8.1E-59 T 25-04-2016 IPR004480 Monothiol glutaredoxin-related SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 SUPERFAMILY SSF89360 114 201 5.1E-11 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 Gene3D G3DSA:3.40.250.10 204 306 9.9E-22 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 SMART SM00450 208 303 5.4E-14 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS18450 5ed07f302a525e167b4ec6d58647d8b9 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 1.6E-40 T 25-04-2016 IPR004480 Monothiol glutaredoxin-related SMD_RS18420 ee0e4a1a8c515205535d464c472b390e 417 Pfam PF08014 Domain of unknown function (DUF1704) 49 407 1.6E-118 T 25-04-2016 IPR012548 Protein of unknown function DUF1704 SMD_RS18420 ee0e4a1a8c515205535d464c472b390e 417 SMART SM01154 41 410 4.4E-149 T 25-04-2016 IPR012548 Protein of unknown function DUF1704 SMD_RS18420 ee0e4a1a8c515205535d464c472b390e 417 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 403 1.4E-109 T 25-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA SMD_RS12625 800425f2faa9013fbc1da20211a14539 387 Pfam PF12693 GspL periplasmic domain 240 366 2.7E-10 T 25-04-2016 IPR025691 GspL periplasmic domain SMD_RS12625 800425f2faa9013fbc1da20211a14539 387 SUPERFAMILY SSF53067 4 143 3.37E-18 T 25-04-2016 SMD_RS12625 800425f2faa9013fbc1da20211a14539 387 Pfam PF05134 Type II secretion system (T2SS), protein L 5 172 1.3E-12 T 25-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 651 684 - T 25-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PRINTS PR00811 Bacterial general secretion pathway protein D signature 533 557 3.3E-14 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PRINTS PR00811 Bacterial general secretion pathway protein D signature 693 707 3.3E-14 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PRINTS PR00811 Bacterial general secretion pathway protein D signature 670 688 3.3E-14 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 578 3.3E-14 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PRINTS PR00811 Bacterial general secretion pathway protein D signature 459 469 3.3E-14 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 Pfam PF03958 Bacterial type II/III secretion system short domain 326 459 8.6E-14 T 25-04-2016 IPR005644 NolW-like SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 Pfam PF03958 Bacterial type II/III secretion system short domain 251 318 9.4E-7 T 25-04-2016 IPR005644 NolW-like SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 Pfam PF00263 Bacterial type II and III secretion system protein 537 706 1.7E-45 T 25-04-2016 IPR004846 Type II/III secretion system GO:0009306 SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PANTHER PTHR30332 29 726 1.7E-135 T 25-04-2016 SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 90 715 2.7E-167 T 25-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 SMD_RS03200 3cc8cbd457531eb0187e384bc60127ff 735 PANTHER PTHR30332:SF0 29 726 1.7E-135 T 25-04-2016 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 168 2.7E-68 T 25-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 175 318 5.5E-63 T 25-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 Gene3D G3DSA:1.10.1040.10 21 316 4.4E-105 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 318 4.1E-126 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 SUPERFAMILY SSF48179 175 319 3.4E-67 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 SUPERFAMILY SSF51735 4 174 4.09E-63 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 PANTHER PTHR21371 10 320 5.6E-173 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS18240 82336866b0e4846e41f0d0bac404fb93 324 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 320 41.916 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS04145 da917877c2482e2d6b63922383000865 124 SUPERFAMILY SSF50249 3 123 5.71E-50 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS04145 da917877c2482e2d6b63922383000865 124 PANTHER PTHR11652 1 116 7.3E-70 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04145 da917877c2482e2d6b63922383000865 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 3.7E-68 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PIRSF PIRSF002133 1 124 8.0E-54 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04145 da917877c2482e2d6b63922383000865 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.429 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 2.3E-41 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-58 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-58 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-58 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-58 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-58 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-58 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMD_RS04145 da917877c2482e2d6b63922383000865 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04145 da917877c2482e2d6b63922383000865 124 Gene3D G3DSA:2.40.50.140 1 123 6.3E-64 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 Gene3D G3DSA:3.40.50.300 160 343 7.1E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 Pfam PF01434 Peptidase family M41 394 604 4.0E-83 T 25-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 627 37.645 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 SMART SM00382 196 335 1.6E-26 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 SUPERFAMILY SSF140990 415 615 4.45E-77 T 25-04-2016 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 SUPERFAMILY SSF52540 158 403 1.92E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 PANTHER PTHR23076 8 616 0.0 T 25-04-2016 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 111 605 2.4E-242 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 Gene3D G3DSA:1.10.8.60 344 417 2.5E-28 T 25-04-2016 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 Pfam PF06480 FtsH Extracellular 8 102 1.1E-11 T 25-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 ProSitePatterns PS00674 AAA-protein family signature. 303 321 - T 25-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SMD_RS08835 e5182d726ca4a7fadf7742dfded5952d 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 332 3.1E-46 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 SUPERFAMILY SSF46785 3 93 1.49E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 Pfam PF12840 Helix-turn-helix domain 10 69 2.0E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 PANTHER PTHR33154 1 101 3.2E-19 T 25-04-2016 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 PANTHER PTHR33154:SF5 1 101 3.2E-19 T 25-04-2016 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.6E-6 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.6E-6 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.6E-6 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 SMART SM00418 9 89 3.1E-6 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS07815 8531fbc851144c2e00dea6c3deae7bf9 109 Gene3D G3DSA:1.10.10.10 2 95 3.0E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.9E-31 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 PANTHER PTHR11544 1 68 3.7E-40 T 25-04-2016 SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 PRINTS PR00050 Cold shock protein signature 25 34 1.7E-17 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 PRINTS PR00050 Cold shock protein signature 40 58 1.7E-17 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-17 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 SUPERFAMILY SSF50249 1 66 4.29E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 PIRSF PIRSF002599 1 68 3.6E-25 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 25-04-2016 IPR019844 Cold-shock conserved site SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 Gene3D G3DSA:2.40.50.140 1 65 2.1E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16175 a44ee5d733ac87e50a418aba3d271621 68 SMART SM00357 3 67 6.7E-31 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 Gene3D G3DSA:1.10.10.60 208 255 2.8E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 SMART SM00342 171 253 4.2E-19 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 SUPERFAMILY SSF51182 12 154 4.45E-10 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 Gene3D G3DSA:1.10.10.60 155 207 4.1E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 Pfam PF12833 Helix-turn-helix domain 177 254 1.8E-19 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 Pfam PF02311 AraC-like ligand binding domain 19 111 2.4E-7 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 Gene3D G3DSA:2.60.120.10 28 85 9.5E-7 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 PANTHER PTHR11019 27 261 3.8E-64 T 25-04-2016 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 SUPERFAMILY SSF46689 207 255 9.86E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS14775 d0bd66fbbeaa926e608eb7dd2e6b8550 262 PANTHER PTHR11019:SF121 27 261 3.8E-64 T 25-04-2016 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 25-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 Gene3D G3DSA:1.10.560.10 3 187 6.7E-49 T 25-04-2016 IPR027413 GroEL-like equatorial domain SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 SUPERFAMILY SSF48592 406 521 1.6E-78 T 25-04-2016 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 SUPERFAMILY SSF48592 7 134 1.6E-78 T 25-04-2016 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 PANTHER PTHR11353 2 549 9.1E-259 T 25-04-2016 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 SUPERFAMILY SSF54849 138 203 8.93E-23 T 25-04-2016 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 PRINTS PR00298 60kDa chaperonin signature 398 419 3.3E-74 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 PRINTS PR00298 60kDa chaperonin signature 27 53 3.3E-74 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 PRINTS PR00298 60kDa chaperonin signature 350 375 3.3E-74 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 PRINTS PR00298 60kDa chaperonin signature 83 110 3.3E-74 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 PRINTS PR00298 60kDa chaperonin signature 268 291 3.3E-74 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 Gene3D G3DSA:1.10.560.10 368 518 2.0E-41 T 25-04-2016 IPR027413 GroEL-like equatorial domain SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 Gene3D G3DSA:3.50.7.10 188 367 2.4E-97 T 25-04-2016 IPR027409 GroEL-like apical domain SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.3E-97 T 25-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 7.3E-254 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.599 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMD_RS19815 2cd361e1d0f0934b49e68bf94d588589 549 SUPERFAMILY SSF52029 184 376 1.38E-81 T 25-04-2016 IPR027409 GroEL-like apical domain SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 Gene3D G3DSA:3.40.50.300 142 316 3.3E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 Gene3D G3DSA:1.10.8.60 317 386 3.4E-22 T 25-04-2016 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 25-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 SUPERFAMILY SSF46689 394 445 2.12E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 25-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 PANTHER PTHR32071 144 451 9.7E-139 T 25-04-2016 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 Pfam PF02954 Bacterial regulatory protein, Fis family 405 438 1.8E-7 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 Gene3D G3DSA:1.10.10.60 405 444 9.0E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 Pfam PF00158 Sigma-54 interaction domain 144 310 2.5E-67 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 SMART SM00382 164 308 5.4E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11980 82b7805095d195b694825fd70352a2bd 451 SUPERFAMILY SSF52540 144 386 3.06E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 419 6.1E-15 T 25-04-2016 IPR000160 GGDEF domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 SUPERFAMILY SSF141868 448 685 1.05E-51 T 25-04-2016 IPR001633 EAL domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Pfam PF00563 EAL domain 447 679 6.9E-55 T 25-04-2016 IPR001633 EAL domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 241 2.8E-8 T 25-04-2016 IPR000014 PAS domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Gene3D G3DSA:3.30.450.20 133 248 6.2E-13 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 PANTHER PTHR10799 106 258 3.5E-38 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 PANTHER PTHR10799 303 540 3.5E-38 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 SMART SM00052 441 685 7.6E-30 T 25-04-2016 IPR001633 EAL domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 423 5.6E-17 T 25-04-2016 IPR000160 GGDEF domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 SUPERFAMILY SSF55073 276 428 3.06E-21 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Gene3D G3DSA:3.30.70.270 272 435 3.8E-25 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Pfam PF13426 PAS domain 161 242 4.4E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 SUPERFAMILY SSF52172 9 125 4.13E-7 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Gene3D G3DSA:3.40.50.2300 3 122 2.4E-6 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 Gene3D G3DSA:3.20.20.450 444 683 5.6E-55 T 25-04-2016 IPR001633 EAL domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 PANTHER PTHR10799:SF710 106 258 3.5E-38 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 PANTHER PTHR10799:SF710 303 540 3.5E-38 T 25-04-2016 SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 SMART SM00267 259 429 5.4E-8 T 25-04-2016 IPR000160 GGDEF domain SMD_RS09585 09aeba794118bd973c23aba8bf97d418 689 SUPERFAMILY SSF55785 133 251 4.89E-13 T 25-04-2016 IPR000014 PAS domain SMD_RS16775 550f5b643abdc6239e36fe7c284f553d 176 SMART SM00260 29 150 1.4E-5 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16775 550f5b643abdc6239e36fe7c284f553d 176 Gene3D G3DSA:2.40.50.180 72 115 2.7E-4 T 25-04-2016 SMD_RS16775 550f5b643abdc6239e36fe7c284f553d 176 Pfam PF01584 CheW-like domain 35 164 9.5E-24 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16775 550f5b643abdc6239e36fe7c284f553d 176 SUPERFAMILY SSF50341 29 170 9.55E-26 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16775 550f5b643abdc6239e36fe7c284f553d 176 PANTHER PTHR22617 30 130 3.4E-21 T 25-04-2016 SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 123 9.2E-10 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 2 170 7.1E-25 T 25-04-2016 IPR010195 Uncharacterised peroxidase-related SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 PANTHER PTHR35446 1 171 4.5E-26 T 25-04-2016 SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 SUPERFAMILY SSF69118 1 174 5.66E-50 T 25-04-2016 IPR029032 AhpD-like SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 Gene3D G3DSA:1.20.1290.10 137 176 2.6E-34 T 25-04-2016 IPR029032 AhpD-like SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 Gene3D G3DSA:1.20.1290.10 1 88 2.6E-34 T 25-04-2016 IPR029032 AhpD-like SMD_RS12315 25a06afd95bead9fe33a0a92d21d2570 178 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 101 5.7E-13 T 25-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 PIRSF PIRSF038885 5 419 5.3E-155 T 25-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 PANTHER PTHR19271:SF9 9 415 1.4E-256 T 25-04-2016 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 290 393 8.4E-38 T 25-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 Pfam PF00033 Cytochrome b/b6/petB 32 220 3.9E-69 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 SUPERFAMILY SSF81648 294 409 4.74E-31 T 25-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 SUPERFAMILY SSF81342 24 292 1.4E-94 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 PANTHER PTHR19271 9 415 1.4E-256 T 25-04-2016 SMD_RS07490 ad320ed31e3e7fe40580ecd6941a7919 419 Gene3D G3DSA:1.20.810.10 15 414 1.2E-155 T 25-04-2016 IPR027387 Cytochrome b/b6-like domain SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 25-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 Gene3D G3DSA:3.40.190.10 10 145 6.7E-46 T 25-04-2016 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 303 30.713 T 25-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 209 301 6.3E-16 T 25-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 1.2E-53 T 25-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 Pfam PF08029 HisG, C-terminal domain 230 300 1.6E-8 T 25-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 PANTHER PTHR21403:SF0 1 303 6.9E-95 T 25-04-2016 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 Gene3D G3DSA:3.30.70.120 233 301 4.2E-5 T 25-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 SUPERFAMILY SSF53850 12 228 3.65E-62 T 25-04-2016 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 Pfam PF01634 ATP phosphoribosyltransferase 60 222 1.3E-44 T 25-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS10260 a3e7bfeb00e4cfaaaacffd027f48c164 303 PANTHER PTHR21403 1 303 6.9E-95 T 25-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 PANTHER PTHR23309 7 462 6.1E-129 T 25-04-2016 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 SUPERFAMILY SSF48179 345 458 9.35E-17 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 PANTHER PTHR23309:SF2 7 462 6.1E-129 T 25-04-2016 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 SUPERFAMILY SSF51735 7 193 3.69E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 SUPERFAMILY SSF52096 474 787 1.36E-39 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Gene3D G3DSA:1.10.1040.10 350 437 1.2E-8 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Gene3D G3DSA:1.10.1040.10 196 294 8.5E-12 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 192 3.5E-41 T 25-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 294 6.7E-9 T 25-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Gene3D G3DSA:3.90.226.10 482 624 2.4E-25 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Pfam PF00378 Enoyl-CoA hydratase/isomerase 485 622 3.9E-16 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 Gene3D G3DSA:3.40.50.720 6 195 3.0E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09750 63707d53a258fbb0a6453e88be1b8404 790 SUPERFAMILY SSF48179 193 312 7.14E-19 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS02265 d554eb8227278d4f9bbfbc227cd32c13 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 48.233 T 25-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 SMD_RS02265 d554eb8227278d4f9bbfbc227cd32c13 196 SUPERFAMILY SSF55469 10 195 1.83E-44 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS02265 d554eb8227278d4f9bbfbc227cd32c13 196 PANTHER PTHR23026 5 192 3.8E-97 T 25-04-2016 SMD_RS02265 d554eb8227278d4f9bbfbc227cd32c13 196 Pfam PF00881 Nitroreductase family 16 158 1.6E-15 T 25-04-2016 IPR029479 Nitroreductase SMD_RS02265 d554eb8227278d4f9bbfbc227cd32c13 196 PANTHER PTHR23026:SF110 5 192 3.8E-97 T 25-04-2016 SMD_RS02265 d554eb8227278d4f9bbfbc227cd32c13 196 Gene3D G3DSA:3.40.109.10 5 194 1.3E-42 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 PANTHER PTHR11533 10 637 9.4E-145 T 25-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 7.5E-17 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 347 359 7.5E-17 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 227 242 7.5E-17 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 343 7.5E-17 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 7.5E-17 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 SUPERFAMILY SSF63737 45 244 2.48E-39 T 25-04-2016 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 SUPERFAMILY SSF48371 502 636 1.38E-36 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 Pfam PF01433 Peptidase family M1 55 421 3.2E-66 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 Gene3D G3DSA:1.10.390.10 341 492 1.8E-34 T 25-04-2016 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 518 636 1.2E-28 T 25-04-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6|UniPathway: UPA00878 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 SMART SM01263 497 636 3.2E-47 T 25-04-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6|UniPathway: UPA00878 SMD_RS18900 e406f069993fc02638ccdd0f471c1821 642 SUPERFAMILY SSF55486 251 490 4.64E-67 T 25-04-2016 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 361 51.798 T 25-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 358 5.3E-100 T 25-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 SUPERFAMILY SSF53383 28 358 2.39E-66 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 Pfam PF00155 Aminotransferase class I and II 47 357 1.6E-48 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 PANTHER PTHR11751 55 361 1.4E-73 T 25-04-2016 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 Gene3D G3DSA:3.90.1150.10 261 358 2.4E-19 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 Gene3D G3DSA:3.40.640.10 41 260 2.1E-61 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS10270 dde887f5613ca8196937c5ce38ccc6bb 364 PANTHER PTHR11751:SF424 55 361 1.4E-73 T 25-04-2016 SMD_RS06280 b0c7d346b2f6b6daf16f81562a6cfa33 627 SUPERFAMILY SSF50156 524 598 4.63E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS06280 b0c7d346b2f6b6daf16f81562a6cfa33 627 Gene3D G3DSA:2.30.42.10 524 589 5.3E-6 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS06280 b0c7d346b2f6b6daf16f81562a6cfa33 627 PIRSF PIRSF016493 30 627 7.6E-136 T 25-04-2016 IPR024191 Peptidase M61 SMD_RS06280 b0c7d346b2f6b6daf16f81562a6cfa33 627 Pfam PF05299 M61 glycyl aminopeptidase 304 421 2.2E-34 T 25-04-2016 IPR007963 Peptidase M61, catalytic domain SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 SUPERFAMILY SSF88946 13 114 5.3E-26 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 188 5.7E-23 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 PANTHER PTHR30173 7 191 1.2E-40 T 25-04-2016 SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 Pfam PF04542 Sigma-70 region 2 36 103 1.1E-15 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 Pfam PF08281 Sigma-70, region 4 133 181 2.0E-16 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 Gene3D G3DSA:1.10.10.10 131 190 7.5E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 SUPERFAMILY SSF88659 132 189 8.07E-14 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16070 3e7f43465faf1312b4431cee18207859 192 Gene3D G3DSA:1.10.1740.10 14 115 5.9E-28 T 25-04-2016 SMD_RS04435 58121af097087090e9f60a4d85459501 423 Gene3D G3DSA:3.90.190.20 287 421 7.2E-33 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS04435 58121af097087090e9f60a4d85459501 423 PANTHER PTHR11136 11 420 3.4E-108 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMD_RS04435 58121af097087090e9f60a4d85459501 423 PIRSF PIRSF001563 2 423 1.3E-101 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMD_RS04435 58121af097087090e9f60a4d85459501 423 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 418 3.4E-96 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMD_RS04435 58121af097087090e9f60a4d85459501 423 Pfam PF08245 Mur ligase middle domain 49 217 2.7E-11 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS04435 58121af097087090e9f60a4d85459501 423 SUPERFAMILY SSF53244 287 421 4.76E-25 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS04435 58121af097087090e9f60a4d85459501 423 PANTHER PTHR11136:SF0 11 420 3.4E-108 T 25-04-2016 SMD_RS04435 58121af097087090e9f60a4d85459501 423 SUPERFAMILY SSF53623 6 283 2.22E-85 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS04435 58121af097087090e9f60a4d85459501 423 Gene3D G3DSA:3.40.1190.10 6 284 1.7E-86 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS20580 fd2425db1c7e266787382682695e2495 144 Pfam PF00293 NUDIX domain 4 137 3.6E-18 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS20580 fd2425db1c7e266787382682695e2495 144 SUPERFAMILY SSF55811 3 141 2.3E-20 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS20580 fd2425db1c7e266787382682695e2495 144 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.59E-5 T 25-04-2016 IPR020476 NUDIX hydrolase SMD_RS20580 fd2425db1c7e266787382682695e2495 144 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.59E-5 T 25-04-2016 IPR020476 NUDIX hydrolase SMD_RS20580 fd2425db1c7e266787382682695e2495 144 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS20580 fd2425db1c7e266787382682695e2495 144 Gene3D G3DSA:3.90.79.10 2 140 4.7E-23 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 PANTHER PTHR26402:SF292 5 232 8.1E-80 T 25-04-2016 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 Gene3D G3DSA:3.40.50.2300 3 126 8.4E-39 T 25-04-2016 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 SUPERFAMILY SSF46894 131 230 2.47E-21 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 PANTHER PTHR26402 5 232 8.1E-80 T 25-04-2016 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 Pfam PF00072 Response regulator receiver domain 7 115 3.1E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 Gene3D G3DSA:1.10.10.10 130 232 5.2E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 SUPERFAMILY SSF52172 3 128 3.13E-40 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 SMART SM00448 5 114 1.9E-40 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.6E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS19795 be9baab570c4ee20abebb130ba0d8d7f 235 SMART SM00862 151 228 1.5E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS19670 aa24e1c14027955422c30ea58d5ec411 309 Gene3D G3DSA:3.30.1490.40 3 55 9.7E-4 T 25-04-2016 IPR003169 GYF domain GO:0005515 SMD_RS19670 aa24e1c14027955422c30ea58d5ec411 309 PANTHER PTHR36115:SF3 108 304 4.5E-40 T 25-04-2016 SMD_RS19670 aa24e1c14027955422c30ea58d5ec411 309 Pfam PF14237 Domain of unknown function (DUF4339) 4 47 1.4E-17 T 25-04-2016 IPR025640 Domain of unknown function DUF4339 SMD_RS19670 aa24e1c14027955422c30ea58d5ec411 309 Pfam PF06271 RDD family 119 254 4.7E-28 T 25-04-2016 IPR010432 RDD SMD_RS19670 aa24e1c14027955422c30ea58d5ec411 309 PANTHER PTHR36115 108 304 4.5E-40 T 25-04-2016 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 379 74.646 T 25-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 25-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 Gene3D G3DSA:3.20.20.70 7 376 7.8E-135 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.1E-126 T 25-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 PANTHER PTHR10578 7 376 6.2E-165 T 25-04-2016 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 PANTHER PTHR10578:SF65 7 376 6.2E-165 T 25-04-2016 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 PIRSF PIRSF000138 2 379 8.8E-123 T 25-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 SMD_RS13325 8fa4e707f8e0f097a0e308be4916b503 379 SUPERFAMILY SSF51395 7 376 6.72E-100 T 25-04-2016 SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 PANTHER PTHR33221 3 135 4.5E-47 T 25-04-2016 SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 SUPERFAMILY SSF46785 3 133 3.54E-32 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.1E-52 T 25-04-2016 IPR014290 SUF system FeS cluster assembly regulator SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 Pfam PF02082 Transcriptional regulator 3 82 1.0E-21 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 130 1.3E-29 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 Gene3D G3DSA:1.10.10.10 3 134 4.8E-36 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05670 f14faa6e2d4f562b330d1f9827aee1f7 151 PANTHER PTHR33221:SF2 3 135 4.5E-47 T 25-04-2016 SMD_RS16575 994cac290ce7df5d28ec09405385c4ae 76 SUPERFAMILY SSF52833 1 72 3.17E-12 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS16575 994cac290ce7df5d28ec09405385c4ae 76 PANTHER PTHR34386:SF2 2 72 2.4E-16 T 25-04-2016 SMD_RS16575 994cac290ce7df5d28ec09405385c4ae 76 PANTHER PTHR34386 2 72 2.4E-16 T 25-04-2016 SMD_RS16575 994cac290ce7df5d28ec09405385c4ae 76 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 6.5E-10 T 25-04-2016 IPR008554 Glutaredoxin-like SMD_RS16575 994cac290ce7df5d28ec09405385c4ae 76 Gene3D G3DSA:3.40.30.10 2 73 1.6E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS00645 275cd7cc2070374ff36ff7e4ab2e40ab 177 PANTHER PTHR30543:SF6 1 129 1.6E-32 T 25-04-2016 SMD_RS00645 275cd7cc2070374ff36ff7e4ab2e40ab 177 Pfam PF03358 NADPH-dependent FMN reductase 1 129 2.3E-24 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMD_RS00645 275cd7cc2070374ff36ff7e4ab2e40ab 177 SUPERFAMILY SSF52218 1 135 9.58E-27 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS00645 275cd7cc2070374ff36ff7e4ab2e40ab 177 Gene3D G3DSA:3.40.50.360 1 134 8.9E-30 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS00645 275cd7cc2070374ff36ff7e4ab2e40ab 177 PANTHER PTHR30543 1 129 1.6E-32 T 25-04-2016 SMD_RS05435 7d110f6dfaf806dfecd58de54f9a62f9 150 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMD_RS05435 7d110f6dfaf806dfecd58de54f9a62f9 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 16 141 1.2E-27 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMD_RS05435 7d110f6dfaf806dfecd58de54f9a62f9 150 PANTHER PTHR30505 1 150 2.7E-44 T 25-04-2016 SMD_RS05435 7d110f6dfaf806dfecd58de54f9a62f9 150 Gene3D G3DSA:3.40.930.10 1 142 7.6E-34 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMD_RS05435 7d110f6dfaf806dfecd58de54f9a62f9 150 SUPERFAMILY SSF55804 15 141 1.57E-30 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SMD_RS05435 7d110f6dfaf806dfecd58de54f9a62f9 150 PANTHER PTHR30505:SF6 1 150 2.7E-44 T 25-04-2016 SMD_RS10195 8eb14e8b7b3eb534c1b8fc524bef8ca8 145 PANTHER PTHR30574:SF1 2 138 5.8E-25 T 25-04-2016 SMD_RS10195 8eb14e8b7b3eb534c1b8fc524bef8ca8 145 PANTHER PTHR30574 2 138 5.8E-25 T 25-04-2016 SMD_RS10195 8eb14e8b7b3eb534c1b8fc524bef8ca8 145 Pfam PF04143 Sulphur transport 4 132 2.0E-6 T 25-04-2016 IPR007272 Sulphur transport domain SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 Pfam PF01431 Peptidase family M13 497 696 2.2E-70 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 PANTHER PTHR11733 60 700 2.2E-215 T 25-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 Pfam PF05649 Peptidase family M13 69 445 1.2E-91 T 25-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 489 501 2.2E-23 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 528 544 2.2E-23 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 598 609 2.2E-23 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 507 519 2.2E-23 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 Gene3D G3DSA:3.40.390.10 488 700 6.8E-109 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 Gene3D G3DSA:3.40.390.10 328 448 6.8E-109 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 PANTHER PTHR11733:SF65 60 700 2.2E-215 T 25-04-2016 SMD_RS15740 5f92c4c2765f2ca41820c7d15b942d0c 700 SUPERFAMILY SSF55486 58 700 4.25E-208 T 25-04-2016 SMD_RS16670 218bd15a9baf53e209e46dd4cae4a59c 155 SUPERFAMILY SSF54637 8 151 1.1E-21 T 25-04-2016 IPR029069 HotDog domain SMD_RS16670 218bd15a9baf53e209e46dd4cae4a59c 155 Pfam PF14539 Domain of unknown function (DUF4442) 18 151 4.2E-54 T 25-04-2016 IPR027961 Protein of unknown function DUF4442 SMD_RS16670 218bd15a9baf53e209e46dd4cae4a59c 155 Gene3D G3DSA:3.10.129.10 7 153 3.1E-54 T 25-04-2016 IPR029069 HotDog domain SMD_RS17675 83b6804722e6a5474b732c5ebd334800 888 Pfam PF10101 Predicted membrane protein (DUF2339) 134 877 2.9E-148 T 25-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane SMD_RS17675 83b6804722e6a5474b732c5ebd334800 888 PANTHER PTHR38434 1 888 1.4E-106 T 25-04-2016 SMD_RS17675 83b6804722e6a5474b732c5ebd334800 888 PANTHER PTHR38434:SF1 1 888 1.4E-106 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 PANTHER PTHR24096 11 155 4.5E-171 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 PANTHER PTHR24096 183 554 4.5E-171 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Gene3D G3DSA:2.30.38.10 382 454 1.9E-30 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Pfam PF00501 AMP-binding enzyme 31 463 5.2E-109 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 SUPERFAMILY SSF56801 24 555 3.66E-147 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 546 1.4E-15 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Gene3D G3DSA:3.40.50.980 218 381 1.0E-40 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Gene3D G3DSA:3.40.50.980 186 217 6.0E-37 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Gene3D G3DSA:3.40.50.980 27 154 6.0E-37 T 25-04-2016 SMD_RS10610 921ba92950008de5a62acaee150c4917 558 Gene3D G3DSA:3.30.300.30 458 554 2.3E-26 T 25-04-2016 SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 302 3.3E-17 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 PANTHER PTHR30158 2 391 2.2E-190 T 25-04-2016 SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 384 4.7E-83 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 Gene3D G3DSA:2.40.50.100 180 212 9.2E-23 T 25-04-2016 SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 Gene3D G3DSA:2.40.50.100 72 105 9.2E-23 T 25-04-2016 SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 PANTHER PTHR30158:SF2 2 391 2.2E-190 T 25-04-2016 SMD_RS09315 1cd9f76656e13a8e6b02ffd5acd8a53e 407 SUPERFAMILY SSF111369 60 306 5.23E-74 T 25-04-2016 SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 Gene3D G3DSA:1.10.443.10 225 377 1.5E-22 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 Pfam PF00589 Phage integrase family 224 366 5.0E-13 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 Gene3D G3DSA:1.10.150.130 98 197 2.8E-15 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 PANTHER PTHR30629:SF3 2 397 2.3E-92 T 25-04-2016 SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 Pfam PF13356 Domain of unknown function (DUF4102) 2 85 4.9E-16 T 25-04-2016 IPR025166 Domain of unknown function DUF4102 SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 SUPERFAMILY SSF56349 98 380 2.5E-54 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS19570 9077bad44def9a62a2c2e91d567f0311 404 PANTHER PTHR30629 2 397 2.3E-92 T 25-04-2016 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 99 105 - T 25-04-2016 IPR014762 DNA mismatch repair, conserved site SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 SUPERFAMILY SSF54211 211 333 2.01E-36 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 SMART SM00853 447 590 1.1E-56 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 SUPERFAMILY SSF118116 443 632 7.59E-60 T 25-04-2016 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 124 1.9E-8 T 25-04-2016 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 8 313 2.0E-97 T 25-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 Gene3D G3DSA:3.30.565.10 8 208 3.9E-73 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 216 332 3.0E-39 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 Gene3D G3DSA:3.30.230.10 220 332 1.1E-38 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 SUPERFAMILY SSF55874 8 207 1.03E-53 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 7 630 29.111 T 25-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 PANTHER PTHR10073 9 630 7.4E-165 T 25-04-2016 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 Pfam PF08676 MutL C terminal dimerisation domain 443 590 1.1E-49 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SMD_RS15080 628f429f7b0127a7d52a006d6c9278af 634 SMART SM01340 215 333 6.5E-58 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 SUPERFAMILY SSF56801 13 447 7.85E-54 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 Gene3D G3DSA:3.40.50.980 130 279 4.1E-13 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 PANTHER PTHR24095 117 446 2.7E-15 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 PANTHER PTHR24095 7 17 2.7E-15 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 SUPERFAMILY SSF54637 454 553 8.46E-13 T 25-04-2016 IPR029069 HotDog domain SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 Pfam PF00501 AMP-binding enzyme 121 300 6.6E-14 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 Gene3D G3DSA:3.30.300.30 339 445 4.0E-12 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 PANTHER PTHR24095:SF195 117 446 2.7E-15 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 PANTHER PTHR24095:SF195 7 17 2.7E-15 T 25-04-2016 SMD_RS21295 91a41c8afda03c6cd4db33bfbada2873 561 Gene3D G3DSA:3.10.129.10 460 539 3.4E-11 T 25-04-2016 IPR029069 HotDog domain SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 Gene3D G3DSA:2.40.50.140 5 67 1.5E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 PIRSF PIRSF002599 1 69 9.0E-22 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 SMART SM00357 6 69 8.1E-28 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 PANTHER PTHR11544:SF63 1 69 1.3E-40 T 25-04-2016 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 SUPERFAMILY SSF50249 2 68 2.14E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.2E-28 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 25-04-2016 IPR019844 Cold-shock conserved site SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 PANTHER PTHR11544 1 69 1.3E-40 T 25-04-2016 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 PRINTS PR00050 Cold shock protein signature 7 22 4.4E-16 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 PRINTS PR00050 Cold shock protein signature 27 36 4.4E-16 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS09610 9bd0369f801b444159a91368aaead3a8 69 PRINTS PR00050 Cold shock protein signature 42 60 4.4E-16 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS19010 d5e11f21b8af03a3d2c3b9b14127d672 200 PANTHER PTHR10612 44 184 1.0E-17 T 25-04-2016 SMD_RS19010 d5e11f21b8af03a3d2c3b9b14127d672 200 SUPERFAMILY SSF50814 12 184 1.59E-29 T 25-04-2016 IPR011038 Calycin-like SMD_RS19010 d5e11f21b8af03a3d2c3b9b14127d672 200 PIRSF PIRSF036893 1 194 2.0E-36 T 25-04-2016 IPR022271 Lipocalin, ApoD type SMD_RS19010 d5e11f21b8af03a3d2c3b9b14127d672 200 Gene3D G3DSA:2.40.128.20 8 185 1.3E-36 T 25-04-2016 IPR012674 Calycin SMD_RS19010 d5e11f21b8af03a3d2c3b9b14127d672 200 Pfam PF08212 Lipocalin-like domain 43 184 2.1E-38 T 25-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SMD_RS19010 d5e11f21b8af03a3d2c3b9b14127d672 200 ProSitePatterns PS00213 Lipocalin signature. 44 55 - T 25-04-2016 IPR022272 Lipocalin family conserved site SMD_RS01820 aea7c08a81345865de152331415489c2 234 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 25-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SMD_RS01820 aea7c08a81345865de152331415489c2 234 Pfam PF04002 RadC-like JAB domain 105 224 3.4E-44 T 25-04-2016 IPR025657 RadC-like JAB domain SMD_RS01820 aea7c08a81345865de152331415489c2 234 Gene3D G3DSA:3.40.140.10 105 225 2.6E-49 T 25-04-2016 SMD_RS01820 aea7c08a81345865de152331415489c2 234 PANTHER PTHR30471:SF5 1 225 1.9E-116 T 25-04-2016 SMD_RS01820 aea7c08a81345865de152331415489c2 234 PANTHER PTHR30471 1 225 1.9E-116 T 25-04-2016 SMD_RS01820 aea7c08a81345865de152331415489c2 234 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 225 4.4E-66 T 25-04-2016 IPR001405 RadC protein SMD_RS05340 8854240e80fdf120df224ddd2a1457c3 387 PANTHER PTHR30486:SF3 15 387 1.0E-176 T 25-04-2016 SMD_RS05340 8854240e80fdf120df224ddd2a1457c3 387 Pfam PF00437 Type II/IV secretion system protein 106 282 3.0E-34 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS05340 8854240e80fdf120df224ddd2a1457c3 387 SUPERFAMILY SSF52540 19 352 1.38E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05340 8854240e80fdf120df224ddd2a1457c3 387 Gene3D G3DSA:3.40.50.300 116 358 8.9E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05340 8854240e80fdf120df224ddd2a1457c3 387 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 18 358 3.2E-136 T 25-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SMD_RS05340 8854240e80fdf120df224ddd2a1457c3 387 PANTHER PTHR30486 15 387 1.0E-176 T 25-04-2016 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Gene3D G3DSA:3.40.120.10 4 155 8.8E-46 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 259 7.2E-18 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 PANTHER PTHR22573 1 452 5.5E-149 T 25-04-2016 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 449 5.9E-185 T 25-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 403 448 1.6E-9 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 SUPERFAMILY SSF53738 3 186 4.12E-45 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 SUPERFAMILY SSF53738 160 261 2.67E-27 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 451 44.543 T 25-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Gene3D G3DSA:3.30.310.50 374 451 1.6E-13 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 371 2.0E-28 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Gene3D G3DSA:3.40.120.10 182 254 1.9E-24 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 6.7E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 6.7E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 6.7E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 SUPERFAMILY SSF55957 363 452 6.28E-15 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 PANTHER PTHR22573:SF15 1 452 5.5E-149 T 25-04-2016 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 138 1.2E-41 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 SUPERFAMILY SSF53738 263 370 1.96E-27 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS15520 d07a335aa44145bdfd8a2f299665149b 453 Gene3D G3DSA:3.40.120.10 256 371 4.5E-29 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS12945 4d20418f85e16cc3c1b146f6447cab35 397 SUPERFAMILY SSF56322 53 385 1.07E-86 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMD_RS12945 4d20418f85e16cc3c1b146f6447cab35 397 Gene3D G3DSA:3.60.120.10 96 386 2.6E-87 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMD_RS12945 4d20418f85e16cc3c1b146f6447cab35 397 PANTHER PTHR11236:SF21 109 394 1.4E-96 T 25-04-2016 SMD_RS12945 4d20418f85e16cc3c1b146f6447cab35 397 PANTHER PTHR11236 109 394 1.4E-96 T 25-04-2016 SMD_RS12945 4d20418f85e16cc3c1b146f6447cab35 397 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 110 384 7.2E-83 T 25-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SMD_RS12945 4d20418f85e16cc3c1b146f6447cab35 397 Pfam PF00425 chorismate binding enzyme 115 376 8.2E-72 T 25-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SMD_RS07915 a776f52cd62755dfb4bf9fe09562d930 164 PANTHER PTHR30471 27 164 2.7E-62 T 25-04-2016 SMD_RS07915 a776f52cd62755dfb4bf9fe09562d930 164 Gene3D G3DSA:3.40.140.10 42 164 9.0E-45 T 25-04-2016 SMD_RS07915 a776f52cd62755dfb4bf9fe09562d930 164 SUPERFAMILY SSF102712 52 141 3.27E-5 T 25-04-2016 SMD_RS07915 a776f52cd62755dfb4bf9fe09562d930 164 PANTHER PTHR30471:SF5 27 164 2.7E-62 T 25-04-2016 SMD_RS07915 a776f52cd62755dfb4bf9fe09562d930 164 Pfam PF04002 RadC-like JAB domain 45 162 1.1E-38 T 25-04-2016 IPR025657 RadC-like JAB domain SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 PANTHER PTHR23501 14 506 2.8E-104 T 25-04-2016 SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 Pfam PF07690 Major Facilitator Superfamily 33 429 8.2E-25 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 PANTHER PTHR23501:SF71 14 506 2.8E-104 T 25-04-2016 SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 SUPERFAMILY SSF103473 31 218 1.02E-26 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 SUPERFAMILY SSF103473 475 503 1.02E-26 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 SUPERFAMILY SSF103473 267 439 1.02E-26 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS18505 68b667a284849af52436cf7644bad6dc 509 Gene3D G3DSA:1.20.1250.20 31 208 3.9E-15 T 25-04-2016 SMD_RS07080 234d157d84c86193080e180346452856 375 Gene3D G3DSA:3.30.70.360 188 287 3.5E-33 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS07080 234d157d84c86193080e180346452856 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMD_RS07080 234d157d84c86193080e180346452856 375 SUPERFAMILY SSF53187 2 178 3.41E-64 T 25-04-2016 SMD_RS07080 234d157d84c86193080e180346452856 375 SUPERFAMILY SSF53187 292 374 3.41E-64 T 25-04-2016 SMD_RS07080 234d157d84c86193080e180346452856 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.997 T 25-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SMD_RS07080 234d157d84c86193080e180346452856 375 PANTHER PTHR11014 4 375 4.1E-88 T 25-04-2016 SMD_RS07080 234d157d84c86193080e180346452856 375 SUPERFAMILY SSF55031 179 287 4.34E-28 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS07080 234d157d84c86193080e180346452856 375 Gene3D G3DSA:3.40.630.10 316 374 1.8E-73 T 25-04-2016 SMD_RS07080 234d157d84c86193080e180346452856 375 Gene3D G3DSA:3.40.630.10 2 187 1.8E-73 T 25-04-2016 SMD_RS07080 234d157d84c86193080e180346452856 375 Pfam PF01546 Peptidase family M20/M25/M40 63 371 6.7E-41 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMD_RS07080 234d157d84c86193080e180346452856 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 3.8E-167 T 25-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SMD_RS07080 234d157d84c86193080e180346452856 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.2E-27 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 PANTHER PTHR11748:SF82 7 186 3.3E-51 T 25-04-2016 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 PANTHER PTHR11748:SF82 238 318 3.3E-51 T 25-04-2016 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Gene3D G3DSA:3.30.70.610 266 305 9.8E-36 T 25-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Gene3D G3DSA:3.30.70.610 370 427 9.8E-36 T 25-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Gene3D G3DSA:3.30.43.10 5 85 7.8E-6 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 PIRSF PIRSF000101 1 562 1.9E-262 T 25-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Gene3D G3DSA:3.30.465.10 102 264 1.5E-79 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 SUPERFAMILY SSF55103 272 560 3.92E-106 T 25-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 560 3.0E-135 T 25-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 SUPERFAMILY SSF56176 5 267 7.01E-67 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 PANTHER PTHR11748 7 186 3.3E-51 T 25-04-2016 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 PANTHER PTHR11748 238 318 3.3E-51 T 25-04-2016 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Pfam PF01565 FAD binding domain 42 179 2.4E-8 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SMD_RS13320 49d5365c8fca66a875501d9bfa91f039 566 Gene3D G3DSA:3.30.1370.20 428 512 8.0E-42 T 25-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 SUPERFAMILY SSF81336 87 260 1.96E-39 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 37 260 1.5E-42 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 266 15.134 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 PANTHER PTHR11410 27 266 2.8E-85 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 25-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 PRINTS PR00123 ATP synthase A subunit signature 246 261 5.0E-13 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 PRINTS PR00123 ATP synthase A subunit signature 193 215 5.0E-13 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 PRINTS PR00123 ATP synthase A subunit signature 96 112 5.0E-13 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 Pfam PF00119 ATP synthase A chain 39 260 1.4E-56 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 PANTHER PTHR11410:SF7 27 266 2.8E-85 T 25-04-2016 SMD_RS19170 171d7f1de3206c2306f7eb2d0f329876 266 Gene3D G3DSA:1.20.120.220 88 263 4.4E-49 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMD_RS01320 f8b60e38a102419430941641046867f3 208 Pfam PF00857 Isochorismatase family 9 192 2.1E-21 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS01320 f8b60e38a102419430941641046867f3 208 PANTHER PTHR11080 1 207 1.4E-54 T 25-04-2016 SMD_RS01320 f8b60e38a102419430941641046867f3 208 SUPERFAMILY SSF52499 4 203 1.44E-43 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS01320 f8b60e38a102419430941641046867f3 208 Gene3D G3DSA:3.40.50.850 6 206 3.6E-57 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS01320 f8b60e38a102419430941641046867f3 208 PANTHER PTHR11080:SF2 1 207 1.4E-54 T 25-04-2016 SMD_RS15995 268fdd0b3477014e42d8ee5a3f256526 196 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 182 3.2E-30 T 25-04-2016 SMD_RS15995 268fdd0b3477014e42d8ee5a3f256526 196 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 185 6.6E-26 T 25-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SMD_RS15995 268fdd0b3477014e42d8ee5a3f256526 196 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 187 1.4E-30 T 25-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial SMD_RS15995 268fdd0b3477014e42d8ee5a3f256526 196 SUPERFAMILY SSF56784 2 186 4.14E-24 T 25-04-2016 IPR023214 HAD-like domain SMD_RS15995 268fdd0b3477014e42d8ee5a3f256526 196 Gene3D G3DSA:3.40.50.1000 72 187 2.7E-25 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 9 430 2.4E-201 T 25-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 Gene3D G3DSA:2.60.120.10 197 222 1.7E-6 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 Gene3D G3DSA:2.60.120.10 249 401 3.6E-61 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 SUPERFAMILY SSF51182 9 431 9.19E-171 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 PANTHER PTHR11056 1 432 2.0E-247 T 25-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 PANTHER PTHR11056:SF0 1 432 2.0E-247 T 25-04-2016 SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 9 432 70.459 T 25-04-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 SMD_RS20360 60e4187cbac686e0b9dcb844830ac811 432 Pfam PF04209 homogentisate 1,2-dioxygenase 10 430 2.5E-204 T 25-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 457 5.2E-217 T 25-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 PANTHER PTHR30182 1 457 3.4E-255 T 25-04-2016 SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 SUPERFAMILY SSF143548 17 158 1.96E-44 T 25-04-2016 IPR029009 Allosteric substrate binding domain SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 Gene3D G3DSA:3.30.1330.90 11 159 2.9E-55 T 25-04-2016 IPR029009 Allosteric substrate binding domain SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 Pfam PF03315 Serine dehydratase beta chain 4 158 8.7E-59 T 25-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 Pfam PF03313 Serine dehydratase alpha chain 189 454 5.3E-107 T 25-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SMD_RS16580 422b8fea369a289847a0dfe71920703b 460 PANTHER PTHR30182:SF1 1 457 3.4E-255 T 25-04-2016 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 SUPERFAMILY SSF55447 223 312 2.88E-19 T 25-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 PANTHER PTHR11908:SF97 162 313 2.7E-110 T 25-04-2016 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 PANTHER PTHR11908:SF97 1 119 2.7E-110 T 25-04-2016 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 SUPERFAMILY SSF56176 1 220 8.18E-56 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 Gene3D G3DSA:3.30.390.50 224 311 6.4E-23 T 25-04-2016 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 292 1.4E-8 T 25-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 SMART SM01092 226 314 1.4E-18 T 25-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 Gene3D G3DSA:3.30.43.10 1 51 5.9E-21 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 221 1.9E-48 T 25-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 PANTHER PTHR11908 162 313 2.7E-110 T 25-04-2016 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 PANTHER PTHR11908 1 119 2.7E-110 T 25-04-2016 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 Gene3D G3DSA:3.30.465.10 56 113 9.2E-31 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS11500 c7289016b24c18302b93e6d6e4cbcacc 316 Gene3D G3DSA:3.30.465.10 157 220 9.2E-31 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 PANTHER PTHR19370 5 245 2.2E-126 T 25-04-2016 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 Gene3D G3DSA:2.40.30.10 4 98 1.1E-30 T 25-04-2016 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 PANTHER PTHR19370:SF98 5 245 2.2E-126 T 25-04-2016 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 7.4E-11 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 Pfam PF00970 Oxidoreductase FAD-binding domain 20 99 1.7E-6 T 25-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 Gene3D G3DSA:3.40.50.80 99 258 6.7E-47 T 25-04-2016 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 SUPERFAMILY SSF52343 104 257 5.63E-41 T 25-04-2016 SMD_RS14610 e7ba6d10193b0ef377442e303b5aac28 259 SUPERFAMILY SSF63380 8 100 1.24E-24 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS06835 5bb435d4597a1e959eb564cf2f0b72ec 147 SUPERFAMILY SSF54593 16 141 1.18E-22 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS06835 5bb435d4597a1e959eb564cf2f0b72ec 147 Gene3D G3DSA:3.10.180.10 12 137 1.3E-23 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS06835 5bb435d4597a1e959eb564cf2f0b72ec 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 17 135 1.3E-9 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS06835 5bb435d4597a1e959eb564cf2f0b72ec 147 PANTHER PTHR34109 13 141 2.2E-45 T 25-04-2016 SMD_RS06835 5bb435d4597a1e959eb564cf2f0b72ec 147 PANTHER PTHR34109:SF3 13 141 2.2E-45 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Pfam PF00512 His Kinase A (phospho-acceptor) domain 809 874 2.7E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 921 1034 3.1E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423:SF548 412 450 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SMART SM00448 1058 1169 3.5E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Pfam PF07495 Y_Y_Y domain 693 754 9.9E-13 T 25-04-2016 IPR011123 Two component regulator three Y SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SUPERFAMILY SSF47384 798 875 1.71E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:3.30.565.10 875 1035 1.7E-48 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SUPERFAMILY SSF55874 863 1033 4.98E-46 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SUPERFAMILY SSF63829 30 235 5.23E-21 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423 412 450 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423 787 1175 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 995 1013 8.6E-15 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 959 973 8.6E-15 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 977 987 8.6E-15 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1019 1032 8.6E-15 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:1.10.287.130 803 870 7.4E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423 43 124 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423 201 272 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SUPERFAMILY SSF52172 1055 1174 7.97E-30 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423:SF548 201 272 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:2.120.10.30 372 538 2.3E-8 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:2.120.10.30 539 609 5.5E-4 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:2.120.10.30 302 323 2.3E-8 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:2.120.10.30 66 243 4.1E-13 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Pfam PF00072 Response regulator receiver domain 1060 1169 2.0E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SMART SM00388 809 874 9.2E-24 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423:SF548 43 124 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 PANTHER PTHR24423:SF548 787 1175 4.3E-191 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Pfam PF07494 Two component regulator propeller 37 60 1.7E-4 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Pfam PF07494 Two component regulator propeller 78 101 0.0034 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SMART SM00387 921 1035 3.3E-41 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SUPERFAMILY SSF63829 350 430 1.66E-15 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 SUPERFAMILY SSF63829 523 635 1.66E-15 T 25-04-2016 SMD_RS16550 21653c3f6060c4fae89df8d748d7b76c 1175 Gene3D G3DSA:3.40.50.2300 1054 1174 3.2E-28 T 25-04-2016 SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 Gene3D G3DSA:3.40.190.10 87 177 2.2E-9 T 25-04-2016 SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 PANTHER PTHR30537 1 303 1.8E-158 T 25-04-2016 SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 SUPERFAMILY SSF46785 10 115 9.09E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 Pfam PF03466 LysR substrate binding domain 92 297 4.1E-37 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 8.0E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 Gene3D G3DSA:3.40.190.10 178 263 4.2E-21 T 25-04-2016 SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 Gene3D G3DSA:1.10.10.10 11 86 1.7E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 SUPERFAMILY SSF53850 93 298 9.05E-39 T 25-04-2016 SMD_RS09465 ee21bc66ef346ce2ae0e4993ab0a1655 305 PANTHER PTHR30537:SF12 1 303 1.8E-158 T 25-04-2016 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 50 63 - T 25-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 Pfam PF00290 Tryptophan synthase alpha chain 10 257 1.1E-83 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 16 266 34.122 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 263 7.3E-73 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 PANTHER PTHR10314 76 132 2.8E-25 T 25-04-2016 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 PANTHER PTHR10314 1 53 2.8E-25 T 25-04-2016 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 Gene3D G3DSA:3.20.20.70 4 268 4.3E-97 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 PANTHER PTHR10314:SF4 76 132 2.8E-25 T 25-04-2016 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 PANTHER PTHR10314:SF4 1 53 2.8E-25 T 25-04-2016 SMD_RS15530 beb0a6ca62979577221e6fce75a3e473 269 SUPERFAMILY SSF51366 4 251 2.67E-84 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Gene3D G3DSA:3.40.50.300 222 397 3.5E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Gene3D G3DSA:1.10.8.60 398 442 4.5E-15 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Gene3D G3DSA:1.10.10.60 443 523 4.9E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Gene3D G3DSA:1.20.5.170 184 212 6.4E-4 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Pfam PF06506 Propionate catabolism activator 41 202 1.2E-48 T 25-04-2016 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 249 262 - T 25-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Gene3D G3DSA:3.40.50.10660 106 183 2.9E-34 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 434 443 - T 25-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 SMART SM00382 245 388 7.4E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 SUPERFAMILY SSF52540 225 459 3.37E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 17 524 1.7E-215 T 25-04-2016 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 PANTHER PTHR32071 13 523 1.6E-126 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Pfam PF00158 Sigma-54 interaction domain 226 391 6.4E-62 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 Gene3D G3DSA:3.40.50.2300 11 105 1.5E-42 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 PANTHER PTHR32071:SF32 13 523 1.6E-126 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 SUPERFAMILY SSF159800 18 200 4.18E-50 T 25-04-2016 SMD_RS16500 9f7a7a69705e33a972bd176cd7f13e4b 527 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 311 326 - T 25-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 SMART SM00771 97 227 5.7E-55 T 25-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 PANTHER PTHR38685 1 239 6.8E-76 T 25-04-2016 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 100 225 5.1E-38 T 25-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 93 227 4.5E-64 T 25-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 SUPERFAMILY SSF64383 96 234 9.42E-37 T 25-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 100 228 6.0E-56 T 25-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 PANTHER PTHR38685:SF1 1 239 6.8E-76 T 25-04-2016 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 Gene3D G3DSA:3.30.1400.10 96 234 4.5E-44 T 25-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SMD_RS14225 8034d09547635e5f7a24cb23d8a408c4 245 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 229 19.002 T 25-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 SMD_RS06865 287ffdadf5248479e6ef7b422f06812e 332 Pfam PF05426 Alginate lyase 38 270 7.0E-53 T 25-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 SMD_RS06865 287ffdadf5248479e6ef7b422f06812e 332 SUPERFAMILY SSF48230 26 322 2.56E-42 T 25-04-2016 IPR008929 Chondroitin AC/alginate lyase SMD_RS06865 287ffdadf5248479e6ef7b422f06812e 332 Gene3D G3DSA:1.50.10.110 16 322 8.9E-78 T 25-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 PIRSF PIRSF037798 1 290 2.2E-140 T 25-04-2016 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 GO:0016829|GO:0042026 KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 Pfam PF01965 DJ-1/PfpI family 77 198 2.4E-7 T 25-04-2016 IPR002818 DJ-1/PfpI SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 PANTHER PTHR11019 3 115 4.6E-89 T 25-04-2016 SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 PANTHER PTHR11019 133 273 4.6E-89 T 25-04-2016 SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 SUPERFAMILY SSF52317 8 284 3.82E-53 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 Gene3D G3DSA:3.40.50.880 6 284 2.9E-73 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 PANTHER PTHR11019:SF109 3 115 4.6E-89 T 25-04-2016 SMD_RS09360 4ea10b67fcd467a6aa0f8cc11b0d01af 290 PANTHER PTHR11019:SF109 133 273 4.6E-89 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 SUPERFAMILY SSF52540 40 229 3.29E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 SUPERFAMILY SSF48019 249 365 1.7E-30 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 554 683 1.5E-9 T 25-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 Pfam PF13177 DNA polymerase III, delta subunit 26 184 4.7E-46 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 9 358 6.5E-127 T 25-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 PANTHER PTHR11669 7 373 9.9E-174 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 PANTHER PTHR11669 408 448 9.9E-174 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 239 364 4.4E-28 T 25-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 Gene3D G3DSA:1.10.8.60 173 248 3.9E-27 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 SMART SM00382 43 194 4.4E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 130 148 1.9E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 47 65 1.9E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 PANTHER PTHR11669:SF0 7 373 9.9E-174 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 PANTHER PTHR11669:SF0 408 448 9.9E-174 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 Gene3D G3DSA:1.20.272.10 249 363 2.4E-40 T 25-04-2016 SMD_RS05090 d1e53b731ced4abe3a7a67e45901e81b 688 Gene3D G3DSA:3.40.50.300 21 172 4.8E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 85 109 - T 25-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 Pfam PF00237 Ribosomal protein L22p/L17e 10 109 5.8E-32 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 28.315 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 PANTHER PTHR13501 1 109 6.5E-47 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 Gene3D G3DSA:3.90.470.10 3 111 3.0E-41 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 SUPERFAMILY SSF54843 2 110 7.33E-42 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMD_RS04195 88a98e3283315bb1520a1c85c253c028 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 7 109 1.7E-45 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMD_RS13170 e44f62ba80227920a34f142f4150f2be 311 Pfam PF00482 Type II secretion system (T2SS), protein F 166 293 5.8E-14 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS13170 e44f62ba80227920a34f142f4150f2be 311 PANTHER PTHR35007 1 310 8.2E-38 T 25-04-2016 SMD_RS13170 e44f62ba80227920a34f142f4150f2be 311 PANTHER PTHR35007:SF2 1 310 8.2E-38 T 25-04-2016 SMD_RS15310 87974a777084671bfdc10a50bbfc3ee6 118 SUPERFAMILY SSF46955 17 114 3.02E-18 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS15310 87974a777084671bfdc10a50bbfc3ee6 118 SMART SM00422 19 89 9.8E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS15310 87974a777084671bfdc10a50bbfc3ee6 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 5.0E-22 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS15310 87974a777084671bfdc10a50bbfc3ee6 118 PANTHER PTHR30204:SF15 11 118 1.9E-34 T 25-04-2016 SMD_RS15310 87974a777084671bfdc10a50bbfc3ee6 118 PANTHER PTHR30204 11 118 1.9E-34 T 25-04-2016 SMD_RS15310 87974a777084671bfdc10a50bbfc3ee6 118 Gene3D G3DSA:1.10.1660.10 16 83 1.2E-16 T 25-04-2016 SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 Gene3D G3DSA:3.40.50.720 1 178 3.1E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 295 3.7E-108 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 PANTHER PTHR10491 1 296 1.8E-94 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 Gene3D G3DSA:3.90.25.10 224 286 1.3E-30 T 25-04-2016 SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 Gene3D G3DSA:3.90.25.10 179 190 1.3E-30 T 25-04-2016 SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 PANTHER PTHR10491:SF4 1 296 1.8E-94 T 25-04-2016 SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 SUPERFAMILY SSF51735 1 296 1.26E-99 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02995 2320bc7fc5d64a97793293c6e69afd2e 297 Pfam PF04321 RmlD substrate binding domain 1 296 5.3E-107 T 25-04-2016 IPR029903 RmlD-like substrate binding domain SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 PIRSF PIRSF036893 1 164 4.2E-49 T 25-04-2016 IPR022271 Lipocalin, ApoD type SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 PRINTS PR01171 Bacterial lipocalin signature 50 59 1.1E-8 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 PRINTS PR01171 Bacterial lipocalin signature 120 131 1.1E-8 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 PRINTS PR01171 Bacterial lipocalin signature 147 157 1.1E-8 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 PRINTS PR01171 Bacterial lipocalin signature 13 27 1.1E-8 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 Gene3D G3DSA:2.40.128.20 4 160 1.5E-46 T 25-04-2016 IPR012674 Calycin SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 PANTHER PTHR10612 5 160 6.4E-42 T 25-04-2016 SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 ProSitePatterns PS00213 Lipocalin signature. 12 25 - T 25-04-2016 IPR022272 Lipocalin family conserved site SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 SUPERFAMILY SSF50814 5 162 8.73E-39 T 25-04-2016 IPR011038 Calycin-like SMD_RS20460 97ab647772018bd46e7f714323d9864c 164 Pfam PF08212 Lipocalin-like domain 14 157 5.6E-47 T 25-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 SUPERFAMILY SSF81665 213 304 2.75E-6 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 SUPERFAMILY SSF81665 43 108 2.75E-6 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 SUPERFAMILY SSF56784 438 562 7.27E-39 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 SUPERFAMILY SSF56784 298 322 7.27E-39 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 SUPERFAMILY SSF56784 357 407 7.27E-39 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 Pfam PF00122 E1-E2 ATPase 75 301 7.0E-42 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 1.7E-22 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 554 1.7E-22 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 159 173 1.7E-22 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 476 1.7E-22 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 538 1.7E-22 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PANTHER PTHR24093:SF49 25 590 0.0 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PANTHER PTHR24093:SF49 628 680 0.0 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PANTHER PTHR24093 25 590 0.0 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 PANTHER PTHR24093 628 680 0.0 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 Gene3D G3DSA:2.70.150.10 54 213 5.3E-23 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 608 7.1E-42 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 348 1.5E-31 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 24 679 7.4E-291 T 25-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 Gene3D G3DSA:3.40.1110.10 322 445 3.5E-43 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 Gene3D G3DSA:3.40.50.1000 446 566 1.4E-34 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 Pfam PF00702 haloacid dehalogenase-like hydrolase 306 533 1.9E-34 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 SUPERFAMILY SSF81653 122 212 2.75E-21 T 25-04-2016 SMD_RS01865 35fb800f158d9d7ab7d4f3f0d20b95d8 685 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 18 683 39.505 T 25-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 SUPERFAMILY SSF46785 6 83 7.23E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 Gene3D G3DSA:3.40.190.10 190 253 1.6E-5 T 25-04-2016 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 SUPERFAMILY SSF53850 92 282 7.78E-27 T 25-04-2016 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 PANTHER PTHR30126:SF29 3 282 7.1E-87 T 25-04-2016 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 Pfam PF03466 LysR substrate binding domain 91 282 6.7E-24 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 Gene3D G3DSA:3.40.190.10 110 189 5.3E-12 T 25-04-2016 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 PANTHER PTHR30126 3 282 7.1E-87 T 25-04-2016 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 Gene3D G3DSA:1.10.10.10 5 81 9.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 9.8E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.8E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.8E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13075 157cb00ff7441c70e25ef15a20d42f8c 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.8E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 535 654 7.5E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 613 1.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 634 1.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 1.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 653 1.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Gene3D G3DSA:3.40.50.2300 676 796 5.2E-32 T 25-04-2016 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SMART SM00448 11 123 1.2E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SMART SM00448 678 790 4.5E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Gene3D G3DSA:1.10.287.130 415 488 5.4E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Pfam PF00512 His Kinase A (phospho-acceptor) domain 423 490 5.8E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SUPERFAMILY SSF55785 280 397 1.34E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 PANTHER PTHR24423:SF438 132 797 2.0E-177 T 25-04-2016 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SMART SM00091 291 357 5.6 T 25-04-2016 IPR000014 PAS domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SMART SM00091 148 214 0.001 T 25-04-2016 IPR000014 PAS domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SMART SM00387 533 656 3.7E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Pfam PF08448 PAS fold 305 409 2.1E-10 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Pfam PF08448 PAS fold 155 261 1.1E-19 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 PANTHER PTHR24423 132 797 2.0E-177 T 25-04-2016 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Gene3D G3DSA:3.30.450.20 283 397 3.9E-13 T 25-04-2016 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 268 5.4E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Gene3D G3DSA:3.40.50.2300 10 145 6.2E-22 T 25-04-2016 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SUPERFAMILY SSF52172 678 795 5.27E-29 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SUPERFAMILY SSF52172 10 170 1.57E-24 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Pfam PF00072 Response regulator receiver domain 680 790 1.7E-16 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Pfam PF00072 Response regulator receiver domain 13 123 1.4E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Gene3D G3DSA:3.30.450.20 146 259 3.2E-21 T 25-04-2016 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SUPERFAMILY SSF55874 483 654 2.1E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SUPERFAMILY SSF55785 135 259 2.44E-21 T 25-04-2016 IPR000014 PAS domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SUPERFAMILY SSF47384 411 489 9.42E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 Gene3D G3DSA:3.30.565.10 492 654 2.4E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11345 2b8b356f34072ef90d237573cf0175ec 799 SMART SM00388 422 492 9.4E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 Gene3D G3DSA:3.20.20.70 12 269 3.2E-116 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 PANTHER PTHR21057 5 270 1.7E-167 T 25-04-2016 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 Pfam PF00793 DAHP synthetase I family 8 266 7.4E-68 T 25-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 PANTHER PTHR21057:SF2 5 270 1.7E-167 T 25-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 52.73 T 25-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 5.8E-129 T 25-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS08750 5fe9fb37a2db1002a38d9fcc19e0abc0 276 SUPERFAMILY SSF51569 2 270 5.13E-108 T 25-04-2016 SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 SUPERFAMILY SSF111369 73 284 3.01E-39 T 25-04-2016 SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 54 358 1.1E-90 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 Gene3D G3DSA:2.40.50.100 173 207 1.0E-18 T 25-04-2016 SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 Gene3D G3DSA:2.40.50.100 81 112 1.0E-18 T 25-04-2016 SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 PANTHER PTHR30469 44 369 9.6E-76 T 25-04-2016 SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 278 3.6E-29 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS09660 cd3946e4537d42e4c488af6f87a27dce 381 Pfam PF00529 HlyD membrane-fusion protein of T1SS 97 343 8.2E-7 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 SUPERFAMILY SSF51338 12 70 3.19E-26 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 SUPERFAMILY SSF51338 368 442 3.19E-26 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 Gene3D G3DSA:2.30.40.10 378 415 3.9E-12 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 Gene3D G3DSA:2.30.40.10 13 72 3.9E-12 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 Gene3D G3DSA:3.20.20.140 73 377 8.3E-97 T 25-04-2016 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 SUPERFAMILY SSF51556 70 369 1.04E-92 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 PANTHER PTHR11271 1 444 5.1E-201 T 25-04-2016 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 Pfam PF01979 Amidohydrolase family 68 415 3.9E-64 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS15015 88d5b7f41210599b6e399044ba0d0f3a 447 PANTHER PTHR11271:SF7 1 444 5.1E-201 T 25-04-2016 SMD_RS14420 f7104459d254b495983f1fb9bf745ae0 291 Gene3D G3DSA:3.40.50.300 4 230 2.2E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14420 f7104459d254b495983f1fb9bf745ae0 291 PANTHER PTHR24220 11 232 3.1E-98 T 25-04-2016 SMD_RS14420 f7104459d254b495983f1fb9bf745ae0 291 Pfam PF00005 ABC transporter 25 162 1.6E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS14420 f7104459d254b495983f1fb9bf745ae0 291 PANTHER PTHR24220:SF530 11 232 3.1E-98 T 25-04-2016 SMD_RS14420 f7104459d254b495983f1fb9bf745ae0 291 SMART SM00382 34 212 6.8E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS14420 f7104459d254b495983f1fb9bf745ae0 291 SUPERFAMILY SSF52540 7 225 4.12E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 SUPERFAMILY SSF56634 30 521 4.32E-216 T 25-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PIRSF PIRSF038927 8 693 2.0E-286 T 25-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PANTHER PTHR11465:SF7 16 584 0.0 T 25-04-2016 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 Pfam PF06628 Catalase-related immune-responsive 451 514 5.9E-22 T 25-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 ProSitePatterns PS00438 Catalase proximal active site signature. 74 90 - T 25-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 Gene3D G3DSA:2.40.180.10 27 393 1.2E-174 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 SUPERFAMILY SSF52317 549 667 1.63E-12 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 Pfam PF00199 Catalase 38 423 1.2E-175 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PRINTS PR00067 Catalase signature 355 381 2.0E-70 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PRINTS PR00067 Catalase signature 51 74 2.0E-70 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PRINTS PR00067 Catalase signature 154 172 2.0E-70 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PRINTS PR00067 Catalase signature 114 132 2.0E-70 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PRINTS PR00067 Catalase signature 135 152 2.0E-70 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PRINTS PR00067 Catalase signature 323 350 2.0E-70 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 368 376 - T 25-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 SMART SM01060 38 426 1.1E-270 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 Gene3D G3DSA:3.40.50.880 550 693 3.9E-34 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS16370 6123883b0e5f38efb3893baa5de2226a 696 PANTHER PTHR11465 16 584 0.0 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 871 29.467 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Gene3D G3DSA:1.10.268.10 362 496 1.4E-45 T 25-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 SUPERFAMILY SSF56719 30 520 1.14E-180 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 PANTHER PTHR10169:SF48 768 839 0.0 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 PANTHER PTHR10169:SF48 449 746 0.0 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 PANTHER PTHR10169:SF48 3 416 0.0 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 SMART SM00434 11 498 2.0E-285 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 870 0.0 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 8.9E-156 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Gene3D G3DSA:3.30.1360.40 236 332 6.7E-39 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 SUPERFAMILY SSF101904 532 739 2.75E-105 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 SUPERFAMILY SSF101904 771 881 2.75E-105 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Gene3D G3DSA:3.90.199.10 34 216 5.5E-84 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 2.0E-12 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 3.7E-11 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 824 868 2.3E-11 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 773 818 2.0E-15 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.3E-10 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 686 3.9E-10 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Gene3D G3DSA:2.120.10.90 771 870 1.0E-126 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 Gene3D G3DSA:2.120.10.90 531 738 1.0E-126 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 PANTHER PTHR10169 768 839 0.0 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 PANTHER PTHR10169 449 746 0.0 T 25-04-2016 SMD_RS14190 f754a83af099a6087b387bdc868c7bad 908 PANTHER PTHR10169 3 416 0.0 T 25-04-2016 SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 PANTHER PTHR10344:SF0 10 217 5.3E-61 T 25-04-2016 SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 ProSitePatterns PS01331 Thymidylate kinase signature. 103 115 - T 25-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 Gene3D G3DSA:3.40.50.300 10 216 1.5E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 SUPERFAMILY SSF52540 9 215 7.04E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 Hamap MF_00165 Thymidylate kinase [tmk]. 10 215 29.607 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 PANTHER PTHR10344 10 217 5.3E-61 T 25-04-2016 SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 10 206 7.7E-50 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMD_RS05190 ab91b27c5f39eac8d9acdf4c0c478399 221 Pfam PF02223 Thymidylate kinase 14 206 1.9E-46 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1040 0.0 T 25-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82693 271 328 8.63E-19 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82693 137 184 8.63E-19 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82714 185 268 2.62E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82714 722 807 4.19E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PANTHER PTHR32063 2 1040 0.0 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 Gene3D G3DSA:1.10.3850.10 275 506 1.3E-65 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 Gene3D G3DSA:1.10.3850.10 814 1036 1.8E-47 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 Pfam PF00873 AcrB/AcrD/AcrF family 7 1035 6.1E-219 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82693 45 127 4.97E-19 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 Gene3D G3DSA:3.30.70.1430 45 142 5.4E-22 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 Gene3D G3DSA:3.30.2090.10 185 268 1.9E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 Gene3D G3DSA:3.30.2090.10 723 806 3.3E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.2E-24 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.2E-24 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.2E-24 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-24 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.2E-24 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.2E-24 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82866 805 1038 4.71E-43 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 PANTHER PTHR32063:SF19 2 1040 0.0 T 25-04-2016 SMD_RS11190 5b8cbb6506cb4772927633324089cde7 1053 SUPERFAMILY SSF82866 294 504 1.29E-39 T 25-04-2016 SMD_RS07000 a154c00e9bef2b4132bf1b877fea4fdf 184 PANTHER PTHR20982 1 184 2.0E-67 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMD_RS07000 a154c00e9bef2b4132bf1b877fea4fdf 184 Gene3D G3DSA:1.10.132.20 67 184 5.8E-39 T 25-04-2016 IPR023584 Ribosome recycling factor domain SMD_RS07000 a154c00e9bef2b4132bf1b877fea4fdf 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 23.318 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMD_RS07000 a154c00e9bef2b4132bf1b877fea4fdf 184 Pfam PF01765 Ribosome recycling factor 20 182 4.2E-55 T 25-04-2016 IPR023584 Ribosome recycling factor domain SMD_RS07000 a154c00e9bef2b4132bf1b877fea4fdf 184 SUPERFAMILY SSF55194 3 182 2.22E-60 T 25-04-2016 IPR023584 Ribosome recycling factor domain SMD_RS07000 a154c00e9bef2b4132bf1b877fea4fdf 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 4.5E-60 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 SUPERFAMILY SSF140356 20 123 5.49E-35 T 25-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 PANTHER PTHR30218:SF0 8 692 0.0 T 25-04-2016 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 SUPERFAMILY SSF56024 514 693 2.69E-70 T 25-04-2016 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Pfam PF02503 Polyphosphate kinase middle domain 138 337 3.9E-61 T 25-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Gene3D G3DSA:3.30.870.10 514 693 9.1E-72 T 25-04-2016 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Gene3D G3DSA:3.30.1840.10 125 316 5.2E-65 T 25-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Gene3D G3DSA:3.30.870.10 330 513 2.8E-75 T 25-04-2016 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 PANTHER PTHR30218 8 692 0.0 T 25-04-2016 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 SUPERFAMILY SSF56024 329 510 7.85E-58 T 25-04-2016 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Pfam PF13090 Polyphosphate kinase C-terminal domain 344 692 2.7E-151 T 25-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Hamap MF_00347 Polyphosphate kinase [ppk]. 21 695 32.341 T 25-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 PIRSF PIRSF015589 9 695 1.4E-267 T 25-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 24 693 2.2E-281 T 25-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 Pfam PF13089 Polyphosphate kinase N-terminal domain 24 128 5.1E-32 T 25-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SMD_RS04495 09ec0846c9fce84338ccb490b7c391e7 695 SUPERFAMILY SSF143724 127 330 2.16E-61 T 25-04-2016 SMD_RS13365 e60375199ac215eff308482742742fb2 452 PANTHER PTHR23501 5 440 1.8E-120 T 25-04-2016 SMD_RS13365 e60375199ac215eff308482742742fb2 452 Gene3D G3DSA:1.20.1250.20 11 187 2.3E-21 T 25-04-2016 SMD_RS13365 e60375199ac215eff308482742742fb2 452 Pfam PF07690 Major Facilitator Superfamily 13 400 3.2E-37 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS13365 e60375199ac215eff308482742742fb2 452 SUPERFAMILY SSF103473 241 437 1.31E-47 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS13365 e60375199ac215eff308482742742fb2 452 SUPERFAMILY SSF103473 5 189 1.31E-47 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS13365 e60375199ac215eff308482742742fb2 452 PANTHER PTHR23501:SF38 5 440 1.8E-120 T 25-04-2016 SMD_RS13365 e60375199ac215eff308482742742fb2 452 Gene3D G3DSA:1.20.1250.20 255 432 3.2E-13 T 25-04-2016 SMD_RS17855 db40fd8021baafe4247e417c82eaad2a 312 SUPERFAMILY SSF53590 4 309 2.22E-88 T 25-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SMD_RS17855 db40fd8021baafe4247e417c82eaad2a 312 Gene3D G3DSA:3.90.245.10 4 310 5.5E-94 T 25-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SMD_RS17855 db40fd8021baafe4247e417c82eaad2a 312 PANTHER PTHR12304 1 309 1.8E-111 T 25-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase SMD_RS17855 db40fd8021baafe4247e417c82eaad2a 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 301 4.4E-64 T 25-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SMD_RS17855 db40fd8021baafe4247e417c82eaad2a 312 PANTHER PTHR12304:SF4 1 309 1.8E-111 T 25-04-2016 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 PANTHER PTHR30544:SF5 22 393 4.7E-181 T 25-04-2016 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 22 379 74.721 T 25-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 SUPERFAMILY SSF102114 123 349 1.15E-15 T 25-04-2016 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 PIRSF PIRSF006004 16 393 1.1E-146 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 21 383 8.0E-134 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 PANTHER PTHR30544 22 393 4.7E-181 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 Gene3D G3DSA:3.20.20.70 125 344 4.5E-16 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS09765 efeb271147c05587a7babe822e529d99 401 Pfam PF04055 Radical SAM superfamily 129 301 1.3E-19 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 PANTHER PTHR10992:SF771 3 232 1.3E-27 T 25-04-2016 SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 PANTHER PTHR10992 3 232 1.3E-27 T 25-04-2016 SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 Gene3D G3DSA:3.40.50.1820 5 230 7.6E-36 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 SUPERFAMILY SSF53474 4 230 2.03E-42 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 Pfam PF12697 Alpha/beta hydrolase family 36 225 2.0E-13 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 2.5E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 176 190 2.5E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS21195 9831ccba7006e83a13451d34692d85c3 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 2.5E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS04465 13068d3478f3f5c306d637e7e9ed24c0 417 Gene3D G3DSA:3.40.390.10 196 386 1.6E-7 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS04465 13068d3478f3f5c306d637e7e9ed24c0 417 SUPERFAMILY SSF55486 195 388 1.44E-15 T 25-04-2016 SMD_RS04465 13068d3478f3f5c306d637e7e9ed24c0 417 Pfam PF13688 Metallo-peptidase family M12 197 383 5.7E-25 T 25-04-2016 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.786 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 67 1.3E-20 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 Pfam PF02609 Exonuclease VII small subunit 15 65 2.9E-19 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 Gene3D G3DSA:1.10.287.1040 14 81 8.6E-26 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 PANTHER PTHR34137 2 69 7.5E-22 T 25-04-2016 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 SUPERFAMILY SSF116842 14 72 2.22E-18 T 25-04-2016 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 PIRSF PIRSF006488 1 85 1.4E-25 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15820 e78c8b0c11bf45f729bd82446eda7554 86 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 31 55 2.0E-5 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS14115 207d3f1604983b63c163529a48eb2c18 321 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 158 279 2.6E-6 T 25-04-2016 IPR018728 Domain of unknown function DUF2268 SMD_RS18625 9a712c5e796dd24cb721b10b65c06a6b 277 PANTHER PTHR35891 61 276 7.2E-64 T 25-04-2016 SMD_RS18625 9a712c5e796dd24cb721b10b65c06a6b 277 SUPERFAMILY SSF52833 86 263 1.12E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18625 9a712c5e796dd24cb721b10b65c06a6b 277 PANTHER PTHR35891:SF2 61 276 7.2E-64 T 25-04-2016 SMD_RS18625 9a712c5e796dd24cb721b10b65c06a6b 277 Gene3D G3DSA:3.40.30.10 86 268 1.4E-54 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18625 9a712c5e796dd24cb721b10b65c06a6b 277 Pfam PF01323 DSBA-like thioredoxin domain 142 261 3.3E-11 T 25-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 SUPERFAMILY SSF111148 1 88 9.16E-37 T 25-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 77 7.0E-34 T 25-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 Gene3D G3DSA:1.10.3880.10 1 88 4.4E-38 T 25-04-2016 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 6.5E-39 T 25-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 PIRSF PIRSF029827 1 89 1.4E-39 T 25-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 PANTHER PTHR36965:SF1 2 88 2.3E-49 T 25-04-2016 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.652 T 25-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SMD_RS09195 72003fa83cfad746ce6ce5ef730b70c5 89 PANTHER PTHR36965 2 88 2.3E-49 T 25-04-2016 SMD_RS15970 5f5667e89187d1ddbb39624bdc4768b4 646 Pfam PF05960 Bacterial protein of unknown function (DUF885) 97 630 2.4E-143 T 25-04-2016 IPR010281 Protein of unknown function DUF885 SMD_RS15970 5f5667e89187d1ddbb39624bdc4768b4 646 PANTHER PTHR33361:SF4 60 635 1.5E-200 T 25-04-2016 SMD_RS15970 5f5667e89187d1ddbb39624bdc4768b4 646 PANTHER PTHR33361 60 635 1.5E-200 T 25-04-2016 SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 Gene3D G3DSA:1.10.10.10 3 88 2.1E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 PANTHER PTHR30537 1 295 1.3E-115 T 25-04-2016 SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 Pfam PF03466 LysR substrate binding domain 88 293 1.7E-47 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.4E-19 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 Gene3D G3DSA:3.40.190.10 177 261 1.6E-21 T 25-04-2016 SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 PANTHER PTHR30537:SF5 1 295 1.3E-115 T 25-04-2016 SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 SUPERFAMILY SSF46785 3 112 7.26E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 Gene3D G3DSA:3.40.190.10 89 176 6.7E-8 T 25-04-2016 SMD_RS13395 1c275b29a1872f2236f45a2b6b7cd253 301 SUPERFAMILY SSF53850 89 295 2.31E-47 T 25-04-2016 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 Gene3D G3DSA:3.40.50.2300 186 323 1.5E-52 T 25-04-2016 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 PANTHER PTHR30146:SF4 14 352 4.2E-113 T 25-04-2016 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 PANTHER PTHR30146 14 352 4.2E-113 T 25-04-2016 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 60 9.2E-18 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 SMART SM00354 14 83 3.6E-24 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 Gene3D G3DSA:1.10.260.40 15 64 1.6E-21 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 SUPERFAMILY SSF47413 15 67 3.21E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 Gene3D G3DSA:3.40.50.2300 65 185 3.2E-28 T 25-04-2016 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 ProSitePatterns PS00356 LacI-type HTH domain signature. 17 35 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 SUPERFAMILY SSF53822 74 350 1.4E-69 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS11750 70e3703c7721166bd74482c96c86e969 352 Pfam PF13377 Periplasmic binding protein-like domain 181 345 8.5E-40 T 25-04-2016 SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 SUPERFAMILY SSF53955 30 173 1.32E-18 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 SUPERFAMILY SSF47090 201 272 4.55E-11 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 Gene3D G3DSA:1.10.101.10 201 272 4.2E-12 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 Gene3D G3DSA:1.10.101.10 296 372 3.1E-10 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 Pfam PF01471 Putative peptidoglycan binding domain 213 271 3.8E-11 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 Pfam PF01471 Putative peptidoglycan binding domain 305 364 2.7E-6 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 Gene3D G3DSA:3.30.20.10 72 111 4.3E-8 T 25-04-2016 SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 Pfam PF00182 Chitinase class I 45 112 1.2E-4 T 25-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 SMD_RS14175 4969cd9ddda883668463aea9cfc88bf6 543 SUPERFAMILY SSF47090 297 371 2.35E-8 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Pfam PF08446 PAS fold 15 118 3.5E-8 T 25-04-2016 IPR013654 PAS fold-2 GO:0006355 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PANTHER PTHR24423:SF518 149 745 3.0E-117 T 25-04-2016 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 630 739 8.6E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Pfam PF01590 GAF domain 147 312 5.3E-19 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Gene3D G3DSA:3.30.450.40 133 322 5.1E-10 T 25-04-2016 IPR029016 GAF domain-like SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SUPERFAMILY SSF55781 297 501 5.59E-53 T 25-04-2016 IPR029016 GAF domain-like SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PANTHER PTHR24423 149 745 3.0E-117 T 25-04-2016 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Gene3D G3DSA:3.30.565.10 591 740 1.4E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SUPERFAMILY SSF55785 6 117 1.05E-17 T 25-04-2016 IPR000014 PAS domain SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Gene3D G3DSA:1.10.287.130 512 583 3.7E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SMART SM00065 146 324 1.0E-9 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SMART SM00388 520 588 5.0E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SMART SM00387 629 741 6.7E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SUPERFAMILY SSF55874 595 738 1.57E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PRINTS PR01033 Phytochrome signature 161 180 2.0E-18 T 25-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PRINTS PR01033 Phytochrome signature 346 366 2.0E-18 T 25-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PRINTS PR01033 Phytochrome signature 463 481 2.0E-18 T 25-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PRINTS PR01033 Phytochrome signature 248 269 2.0E-18 T 25-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 PRINTS PR01033 Phytochrome signature 432 451 2.0E-18 T 25-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Pfam PF00360 Phytochrome region 327 504 3.0E-56 T 25-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SUPERFAMILY SSF47384 505 586 3.14E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 Pfam PF00512 His Kinase A (phospho-acceptor) domain 522 586 3.7E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11355 f4882331771011fb633fd0ca119905b3 745 SUPERFAMILY SSF55781 129 311 1.1E-55 T 25-04-2016 IPR029016 GAF domain-like SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 Gene3D G3DSA:3.40.50.720 191 310 8.7E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 3.5E-26 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 PANTHER PTHR11695 128 369 2.5E-217 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 PANTHER PTHR11695 15 108 2.5E-217 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 PANTHER PTHR11695:SF560 128 369 2.5E-217 T 25-04-2016 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 PANTHER PTHR11695:SF560 15 108 2.5E-217 T 25-04-2016 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 SUPERFAMILY SSF51735 161 333 9.31E-46 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 SUPERFAMILY SSF50129 318 369 3.3E-11 T 25-04-2016 IPR011032 GroES-like SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 1.3E-24 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 SMART SM00829 12 367 1.2E-4 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.8E-220 T 25-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 SUPERFAMILY SSF50129 1 184 3.04E-71 T 25-04-2016 IPR011032 GroES-like SMD_RS18540 3d6dae550a0432bb29273bdcab10637c 369 Gene3D G3DSA:3.90.180.10 2 190 4.3E-69 T 25-04-2016 IPR011032 GroES-like SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 PANTHER PTHR10516:SF316 129 160 1.3E-47 T 25-04-2016 SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 PANTHER PTHR10516:SF316 1 84 1.3E-47 T 25-04-2016 SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 SUPERFAMILY SSF54534 2 140 5.11E-34 T 25-04-2016 SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 PANTHER PTHR10516 129 160 1.3E-47 T 25-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 PANTHER PTHR10516 1 84 1.3E-47 T 25-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 Gene3D G3DSA:3.10.50.40 2 81 4.0E-20 T 25-04-2016 SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 Gene3D G3DSA:3.10.50.40 126 141 4.0E-20 T 25-04-2016 SMD_RS15785 34cc459b2062ce044c53c9de92ccbb80 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 7.0E-11 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMD_RS13435 9d74f2c85fad5aa38c0c6208adfe2d7e 257 Pfam PF01168 Alanine racemase, N-terminal domain 19 242 1.9E-23 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS13435 9d74f2c85fad5aa38c0c6208adfe2d7e 257 SUPERFAMILY SSF51419 12 240 8.37E-74 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS13435 9d74f2c85fad5aa38c0c6208adfe2d7e 257 Gene3D G3DSA:3.20.20.10 12 246 7.3E-88 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS13435 9d74f2c85fad5aa38c0c6208adfe2d7e 257 PANTHER PTHR10146 1 256 4.1E-84 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMD_RS13435 9d74f2c85fad5aa38c0c6208adfe2d7e 257 PIRSF PIRSF004848 10 248 8.4E-71 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMD_RS13435 9d74f2c85fad5aa38c0c6208adfe2d7e 257 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 17 242 1.5E-54 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 PANTHER PTHR30579 1 301 9.0E-97 T 25-04-2016 SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 Gene3D G3DSA:3.40.190.10 94 199 5.0E-42 T 25-04-2016 SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 Gene3D G3DSA:1.10.10.10 2 74 6.0E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 SUPERFAMILY SSF53850 94 281 1.3E-20 T 25-04-2016 SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 SUPERFAMILY SSF46785 1 111 1.85E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 Pfam PF03466 LysR substrate binding domain 91 265 8.6E-16 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.0E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 PANTHER PTHR30579:SF2 1 301 9.0E-97 T 25-04-2016 SMD_RS06065 9d4a8a52ec257e995e5c88aa6b77b099 301 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 3 294 1.4E-113 T 25-04-2016 IPR017685 HTH-type transcriptional regulator ArgP SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Pfam PF13291 ACT domain 639 716 4.2E-16 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 SMART SM00954 238 348 7.2E-67 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 PANTHER PTHR21262 122 718 0.0 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 SUPERFAMILY SSF55021 641 716 8.01E-8 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 SUPERFAMILY SSF81301 195 367 8.99E-63 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 PANTHER PTHR21262:SF5 122 718 0.0 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 SUPERFAMILY SSF81271 385 449 2.62E-19 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Gene3D G3DSA:3.30.460.10 181 327 3.6E-51 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Pfam PF04607 Region found in RelA / SpoT proteins 238 348 2.3E-37 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Gene3D G3DSA:3.10.20.30 391 451 1.8E-20 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 SUPERFAMILY SSF109604 47 193 2.89E-23 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Pfam PF13328 HD domain 54 179 5.0E-18 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Pfam PF02824 TGS domain 393 449 7.5E-19 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 Gene3D G3DSA:3.30.70.260 640 715 1.1E-8 T 25-04-2016 SMD_RS16830 7f337bec27723d29c9f81908e3bf4fea 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 56 713 2.4E-163 T 25-04-2016 IPR004811 RelA/SpoT family GO:0015969 SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 312 452 6.8E-60 T 25-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 Pfam PF13560 Helix-turn-helix domain 9 62 1.0E-11 T 25-04-2016 SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 SMART SM00530 13 67 6.4E-11 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 PIRSF PIRSF019251 5 454 1.6E-153 T 25-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 Gene3D G3DSA:1.10.260.40 6 74 2.4E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 SUPERFAMILY SSF47413 8 72 3.66E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS01345 2ab862c9a82561a925de8c3e8962e10b 455 Pfam PF06114 Domain of unknown function (DUF955) 188 311 3.8E-19 T 25-04-2016 IPR010359 HTH domain, IrrE-type SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 SUPERFAMILY SSF54211 4 160 4.17E-27 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 Pfam PF00288 GHMP kinases N terminal domain 82 148 2.9E-12 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 Pfam PF08544 GHMP kinases C terminal 209 283 7.8E-10 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 Gene3D G3DSA:3.30.230.10 4 155 5.8E-36 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PRINTS PR00958 Homoserine kinase signature 249 264 6.1E-23 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PRINTS PR00958 Homoserine kinase signature 10 25 6.1E-23 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PRINTS PR00958 Homoserine kinase signature 95 110 6.1E-23 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PRINTS PR00958 Homoserine kinase signature 170 187 6.1E-23 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PRINTS PR00958 Homoserine kinase signature 135 148 6.1E-23 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PANTHER PTHR20861 4 303 4.3E-80 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 SUPERFAMILY SSF55060 167 281 1.67E-20 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PIRSF PIRSF000676 1 304 7.7E-72 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 Gene3D G3DSA:3.30.70.890 163 288 2.0E-26 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 PANTHER PTHR20861:SF1 4 303 4.3E-80 T 25-04-2016 SMD_RS10230 5b3bcbc8215c560f32e17b49516d7a73 304 Hamap MF_00384 Homoserine kinase [thrB]. 3 303 27.922 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMD_RS11540 50ac94e57752af000429255b3ff52912 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PANTHER PTHR24322:SF468 156 187 7.5E-42 T 25-04-2016 SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PANTHER PTHR24322:SF468 12 140 7.5E-42 T 25-04-2016 SMD_RS11540 50ac94e57752af000429255b3ff52912 267 SUPERFAMILY SSF51735 6 228 9.01E-56 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.3E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.3E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.3E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 Gene3D G3DSA:3.40.50.720 9 224 2.0E-54 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PANTHER PTHR24322 156 187 7.5E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PANTHER PTHR24322 12 140 7.5E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 Pfam PF00106 short chain dehydrogenase 9 194 2.2E-44 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11540 50ac94e57752af000429255b3ff52912 267 PIRSF PIRSF000126 2 265 3.2E-74 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 SUPERFAMILY SSF53822 59 312 1.18E-67 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 Pfam PF13377 Periplasmic binding protein-like domain 167 324 4.4E-34 T 25-04-2016 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 SUPERFAMILY SSF47413 3 59 1.13E-14 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 Gene3D G3DSA:3.40.50.2300 171 303 1.1E-39 T 25-04-2016 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.6E-15 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 Gene3D G3DSA:3.40.50.2300 54 170 5.6E-42 T 25-04-2016 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 SMART SM00354 2 71 1.3E-26 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 PANTHER PTHR30146 1 325 5.6E-108 T 25-04-2016 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.8E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.8E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 PANTHER PTHR30146:SF4 1 325 5.6E-108 T 25-04-2016 SMD_RS11690 c35dbf13a5cf3b4f61ba2b3950a1d85f 327 Gene3D G3DSA:1.10.260.40 4 53 1.9E-22 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS10540 95d3e5f57c7d6e30aafa52eb28c85600 305 PANTHER PTHR31209 136 235 3.4E-14 T 25-04-2016 SMD_RS10540 95d3e5f57c7d6e30aafa52eb28c85600 305 PIRSF PIRSF015283 4 305 1.3E-78 T 25-04-2016 IPR016631 Regulatory, RpfE SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 SUPERFAMILY SSF51735 3 154 2.1E-48 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 Gene3D G3DSA:3.30.360.10 324 373 1.1E-33 T 25-04-2016 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 Gene3D G3DSA:3.30.360.10 142 278 1.1E-33 T 25-04-2016 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 2.9E-30 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 PANTHER PTHR22604:SF123 1 209 5.4E-74 T 25-04-2016 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 PANTHER PTHR22604:SF123 227 373 5.4E-74 T 25-04-2016 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 SUPERFAMILY SSF55347 127 320 7.36E-33 T 25-04-2016 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 206 4.8E-6 T 25-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 Gene3D G3DSA:3.40.50.720 1 141 5.6E-49 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 PANTHER PTHR22604 1 209 5.4E-74 T 25-04-2016 SMD_RS05855 26c666d98e45f990d71d53c3686f106a 374 PANTHER PTHR22604 227 373 5.4E-74 T 25-04-2016 SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 Gene3D G3DSA:3.90.1530.10 41 142 1.6E-40 T 25-04-2016 SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 216 1.4E-58 T 25-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 SMART SM00470 46 136 9.0E-39 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 PANTHER PTHR33375 2 307 1.3E-97 T 25-04-2016 SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 Pfam PF02195 ParB-like nuclease domain 47 136 1.2E-28 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 PANTHER PTHR33375:SF1 2 307 1.3E-97 T 25-04-2016 SMD_RS21520 546d6ee76327bd678135b7901ec4e579 307 SUPERFAMILY SSF110849 45 180 4.81E-33 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS07240 6aeb42bfbd93244f1073d841d5dc9427 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 278 2.5E-22 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07240 6aeb42bfbd93244f1073d841d5dc9427 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 18 279 5.4E-86 T 25-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SMD_RS07240 6aeb42bfbd93244f1073d841d5dc9427 287 PANTHER PTHR30425:SF0 1 287 7.6E-116 T 25-04-2016 SMD_RS07240 6aeb42bfbd93244f1073d841d5dc9427 287 Gene3D G3DSA:1.10.3720.10 64 278 1.4E-33 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07240 6aeb42bfbd93244f1073d841d5dc9427 287 PANTHER PTHR30425 1 287 7.6E-116 T 25-04-2016 SMD_RS07240 6aeb42bfbd93244f1073d841d5dc9427 287 SUPERFAMILY SSF161098 27 275 1.31E-29 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 SUPERFAMILY SSF47384 210 282 4.12E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 Pfam PF00672 HAMP domain 157 222 9.7E-7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 PANTHER PTHR24423 169 428 7.7E-50 T 25-04-2016 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 PANTHER PTHR24423 24 44 7.7E-50 T 25-04-2016 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 4.2E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 4.2E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 4.2E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 Gene3D G3DSA:3.30.565.10 271 428 2.3E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 SMART SM00388 227 284 1.9E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 423 4.6E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 282 2.1E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 SMART SM00387 323 432 8.1E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 SUPERFAMILY SSF55874 274 428 4.32E-31 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19790 756757b6bbe17435e178692ba461f52b 432 Gene3D G3DSA:1.10.287.130 219 270 6.3E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 188 6.5E-32 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 182 1.0E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 SUPERFAMILY SSF56784 5 216 4.47E-56 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 PANTHER PTHR18901 4 213 3.6E-56 T 25-04-2016 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 Gene3D G3DSA:1.10.150.240 22 73 2.8E-17 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 PANTHER PTHR18901:SF14 4 213 3.6E-56 T 25-04-2016 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 Gene3D G3DSA:3.40.50.1000 74 214 1.9E-41 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 Gene3D G3DSA:3.40.50.1000 4 21 1.9E-41 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 2.0E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 2.0E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 2.0E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.0E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02745 fad94ef533630824502f6c0e3153f639 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 215 1.8E-61 T 25-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SMD_RS01090 a9ae7b7d129e82f743443a76519317c3 330 SUPERFAMILY SSF51735 1 325 6.07E-65 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS01090 a9ae7b7d129e82f743443a76519317c3 330 PANTHER PTHR10366:SF460 2 324 6.9E-120 T 25-04-2016 SMD_RS01090 a9ae7b7d129e82f743443a76519317c3 330 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 253 5.1E-52 T 25-04-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 SMD_RS01090 a9ae7b7d129e82f743443a76519317c3 330 PANTHER PTHR10366 2 324 6.9E-120 T 25-04-2016 SMD_RS01090 a9ae7b7d129e82f743443a76519317c3 330 Gene3D G3DSA:3.40.50.720 1 323 9.8E-59 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10710 a6ebff49a9cad43c172d36c4f460d579 121 SMART SM00448 3 116 7.1E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10710 a6ebff49a9cad43c172d36c4f460d579 121 Pfam PF00072 Response regulator receiver domain 5 116 1.6E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10710 a6ebff49a9cad43c172d36c4f460d579 121 PANTHER PTHR26402 3 120 8.9E-41 T 25-04-2016 SMD_RS10710 a6ebff49a9cad43c172d36c4f460d579 121 SUPERFAMILY SSF52172 3 121 4.27E-36 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10710 a6ebff49a9cad43c172d36c4f460d579 121 Gene3D G3DSA:3.40.50.2300 2 120 4.8E-37 T 25-04-2016 SMD_RS08255 da14ef3eb119495394a04d637302f52d 166 Pfam PF03713 Domain of unknown function (DUF305) 111 161 3.4E-11 T 25-04-2016 IPR005183 Domain of unknown function DUF305 SMD_RS08255 da14ef3eb119495394a04d637302f52d 166 Gene3D G3DSA:1.20.1260.10 59 164 1.5E-21 T 25-04-2016 IPR012347 Ferritin-related SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 3.0E-34 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 PANTHER PTHR33449 3 106 2.2E-48 T 25-04-2016 SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 9.1E-33 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 SUPERFAMILY SSF82607 9 100 2.35E-32 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 PIRSF PIRSF004555 1 106 1.4E-37 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 Gene3D G3DSA:3.30.1310.10 1 106 5.3E-46 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 22.806 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMD_RS05095 b9c0ee1a4a5cbe5c50ed94961adca374 106 PANTHER PTHR33449:SF1 3 106 2.2E-48 T 25-04-2016 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 PANTHER PTHR26402 11 236 1.5E-70 T 25-04-2016 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 SUPERFAMILY SSF46894 136 236 5.95E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 Gene3D G3DSA:1.10.10.10 137 236 8.5E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 Gene3D G3DSA:3.40.50.2300 8 131 1.4E-37 T 25-04-2016 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 SMART SM00862 162 236 1.8E-13 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 236 3.3E-14 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 Pfam PF00072 Response regulator receiver domain 13 122 7.0E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 SUPERFAMILY SSF52172 7 131 5.55E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 PANTHER PTHR26402:SF531 11 236 1.5E-70 T 25-04-2016 SMD_RS12155 de5141676c61dc5527140d81f4da26cb 238 SMART SM00448 11 121 1.1E-38 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Pfam PF03454 MoeA C-terminal region (domain IV) 333 402 4.9E-8 T 25-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 SUPERFAMILY SSF53218 177 325 1.96E-36 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 PANTHER PTHR10192 1 417 6.8E-127 T 25-04-2016 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 167 9.5E-33 T 25-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Pfam PF00994 Probable molybdopterin binding domain 180 320 1.7E-25 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 SMART SM00852 180 321 1.8E-34 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Gene3D G3DSA:3.40.980.10 162 334 4.5E-50 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 SUPERFAMILY SSF63867 331 405 2.35E-12 T 25-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Gene3D G3DSA:3.90.105.10 132 161 1.2E-12 T 25-04-2016 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 SUPERFAMILY SSF63882 1 176 7.98E-45 T 25-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Gene3D G3DSA:2.170.190.11 44 131 3.7E-21 T 25-04-2016 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 Gene3D G3DSA:2.40.340.10 335 402 1.8E-10 T 25-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 317 5.4E-27 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12760 a566d521dcdffd1362caf4fd41415735 417 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 255 289 - T 25-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SMD_RS05675 75248ff2f2aa1b63c535654322f4ba94 155 PANTHER PTHR22884:SF336 4 141 4.7E-32 T 25-04-2016 SMD_RS05675 75248ff2f2aa1b63c535654322f4ba94 155 PANTHER PTHR22884 4 141 4.7E-32 T 25-04-2016 SMD_RS05675 75248ff2f2aa1b63c535654322f4ba94 155 SMART SM00317 3 128 4.0E-31 T 25-04-2016 IPR001214 SET domain GO:0005515 SMD_RS05675 75248ff2f2aa1b63c535654322f4ba94 155 Gene3D G3DSA:2.170.270.10 3 150 1.3E-42 T 25-04-2016 SMD_RS05675 75248ff2f2aa1b63c535654322f4ba94 155 Pfam PF00856 SET domain 14 122 2.9E-20 T 25-04-2016 IPR001214 SET domain GO:0005515 SMD_RS05675 75248ff2f2aa1b63c535654322f4ba94 155 SUPERFAMILY SSF82199 3 148 1.83E-42 T 25-04-2016 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 206 222 - T 25-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 ProSitePatterns PS01155 Endonuclease III family signature. 113 142 - T 25-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 SUPERFAMILY SSF48150 15 238 7.54E-73 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 47 178 1.4E-18 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 SMART SM00478 50 204 1.1E-41 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 PANTHER PTHR10359 19 319 2.1E-92 T 25-04-2016 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 Gene3D G3DSA:1.10.1670.10 134 238 2.5E-35 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 17 289 8.7E-105 T 25-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 Pfam PF00633 Helix-hairpin-helix motif 111 138 1.9E-6 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 Pfam PF14815 NUDIX domain 249 356 1.6E-22 T 25-04-2016 IPR029119 MutY, C-terminal SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 Gene3D G3DSA:3.90.79.10 244 356 1.6E-24 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 Gene3D G3DSA:1.10.340.30 32 133 3.1E-43 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS09200 5c7acd85da549ae750b6f31a861095b3 374 SUPERFAMILY SSF55811 234 356 2.46E-23 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 PANTHER PTHR21000 3 618 0.0 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 PANTHER PTHR21000:SF9 3 618 0.0 T 25-04-2016 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 1.7E-275 T 25-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 SUPERFAMILY SSF143975 3 420 9.81E-140 T 25-04-2016 SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 SUPERFAMILY SSF52016 421 601 2.82E-52 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS09120 ebcbe71ea37e629366648073a1d7928a 638 Pfam PF00920 Dehydratase family 68 599 4.6E-152 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 SUPERFAMILY SSF55174 24 111 5.89E-7 T 25-04-2016 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 Pfam PF00849 RNA pseudouridylate synthase 98 248 2.7E-33 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 Pfam PF01479 S4 domain 25 71 1.5E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 SUPERFAMILY SSF55120 83 321 3.7E-81 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 319 1.1E-95 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 PANTHER PTHR11079 15 329 3.2E-137 T 25-04-2016 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 PANTHER PTHR11079:SF73 15 329 3.2E-137 T 25-04-2016 SMD_RS17405 bafd09c87ae1612af236192fa46fafc1 333 Gene3D G3DSA:3.10.290.10 26 73 3.9E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PANTHER PTHR13697 86 381 1.9E-155 T 25-04-2016 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PANTHER PTHR13697:SF19 86 381 1.9E-155 T 25-04-2016 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 Pfam PF00365 Phosphofructokinase 10 322 6.1E-48 T 25-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PIRSF PIRSF036483 2 417 1.2E-208 T 25-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 3.4E-13 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 3.4E-13 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 3.4E-13 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 3.4E-13 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 234 246 3.4E-13 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 SUPERFAMILY SSF53784 7 415 1.19E-103 T 25-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 44.121 T 25-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 SMD_RS18110 b8fc516d3d24942c13bedce5a9ee8660 418 Gene3D G3DSA:3.40.50.450 8 236 1.8E-51 T 25-04-2016 SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 SUPERFAMILY SSF52821 6 158 1.7E-36 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 PANTHER PTHR11364:SF0 35 299 6.1E-78 T 25-04-2016 SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 PANTHER PTHR11364 35 299 6.1E-78 T 25-04-2016 SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 SMART SM00450 12 151 4.0E-18 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 SMART SM00450 175 294 5.0E-9 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 Pfam PF00581 Rhodanese-like domain 35 148 6.5E-18 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 Pfam PF00581 Rhodanese-like domain 179 290 6.3E-7 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 Gene3D G3DSA:3.40.250.10 5 160 1.8E-45 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 Gene3D G3DSA:3.40.250.10 170 299 2.7E-30 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS07290 fad8b0253d65a0e191158b2f51a06271 300 SUPERFAMILY SSF52821 178 299 2.36E-28 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 Gene3D G3DSA:2.30.130.10 12 70 2.7E-17 T 25-04-2016 IPR015947 PUA-like domain SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 SUPERFAMILY SSF53335 78 384 7.11E-68 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 Gene3D G3DSA:3.40.50.150 179 387 5.4E-58 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 SUPERFAMILY SSF88697 12 69 2.19E-10 T 25-04-2016 IPR015947 PUA-like domain SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 PANTHER PTHR11061:SF12 7 389 5.6E-103 T 25-04-2016 SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 PANTHER PTHR11061 7 389 5.6E-103 T 25-04-2016 SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 Gene3D G3DSA:3.30.750.80 73 170 4.8E-25 T 25-04-2016 SMD_RS21935 5a8983fd01a16562b5fdc99fd0847d6f 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 311 2.9E-19 T 25-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 Gene3D G3DSA:3.30.1330.50 8 163 2.1E-70 T 25-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 43 58 - T 25-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 10 163 8.4E-69 T 25-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 PANTHER PTHR32125 5 165 1.8E-55 T 25-04-2016 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 SUPERFAMILY SSF69765 9 163 7.19E-65 T 25-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 9 164 36.159 T 25-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08780 12d610561214b14e3ab93913e2882147 165 Pfam PF02542 YgbB family 9 162 3.4E-64 T 25-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS16420 99f5b9fc0353dbc20d0d5d53d21f4fa0 287 PANTHER PTHR10264:SF80 7 285 1.6E-81 T 25-04-2016 SMD_RS16420 99f5b9fc0353dbc20d0d5d53d21f4fa0 287 PIRSF PIRSF005651 1 287 8.5E-78 T 25-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SMD_RS16420 99f5b9fc0353dbc20d0d5d53d21f4fa0 287 SUPERFAMILY SSF117892 51 190 2.22E-19 T 25-04-2016 IPR001107 Band 7 domain SMD_RS16420 99f5b9fc0353dbc20d0d5d53d21f4fa0 287 SMART SM00244 19 184 2.1E-13 T 25-04-2016 IPR001107 Band 7 domain SMD_RS16420 99f5b9fc0353dbc20d0d5d53d21f4fa0 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 1.2E-23 T 25-04-2016 IPR001107 Band 7 domain SMD_RS16420 99f5b9fc0353dbc20d0d5d53d21f4fa0 287 PANTHER PTHR10264 7 285 1.6E-81 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Gene3D G3DSA:3.90.190.20 322 468 8.8E-51 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 411 2.2E-19 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 PANTHER PTHR23135 10 462 1.2E-211 T 25-04-2016 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Pfam PF08245 Mur ligase middle domain 120 299 8.1E-28 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 SUPERFAMILY SSF53623 101 317 6.28E-70 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 43.068 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 466 4.8E-164 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Pfam PF01225 Mur ligase family, catalytic domain 18 115 9.6E-27 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 PANTHER PTHR23135:SF5 10 462 1.2E-211 T 25-04-2016 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 SUPERFAMILY SSF51984 17 102 1.2E-27 T 25-04-2016 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Gene3D G3DSA:3.40.1190.10 104 321 9.8E-84 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 SUPERFAMILY SSF53244 319 464 6.04E-43 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03465 ed9bcb3ffcaa73654f0426ca2fe8490f 478 Gene3D G3DSA:3.40.50.720 17 102 1.4E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS08600 f611f2398293dfc67f97db75f21d5fdd 172 Pfam PF13671 AAA domain 13 154 1.3E-27 T 25-04-2016 SMD_RS08600 f611f2398293dfc67f97db75f21d5fdd 172 SUPERFAMILY SSF52540 12 150 5.72E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08600 f611f2398293dfc67f97db75f21d5fdd 172 Gene3D G3DSA:3.40.50.300 11 155 3.2E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04530 a72fc1fad85c7db81d599a735bb6495a 247 Pfam PF00857 Isochorismatase family 47 233 7.0E-36 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS04530 a72fc1fad85c7db81d599a735bb6495a 247 SUPERFAMILY SSF52499 21 238 4.45E-47 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS04530 a72fc1fad85c7db81d599a735bb6495a 247 Gene3D G3DSA:3.40.50.850 16 237 1.2E-51 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS04530 a72fc1fad85c7db81d599a735bb6495a 247 PANTHER PTHR11080 42 238 8.1E-36 T 25-04-2016 SMD_RS15260 b39600a9c84eb954a1a86c4b60cbe44b 110 PANTHER PTHR30561:SF1 1 110 4.8E-53 T 25-04-2016 SMD_RS15260 b39600a9c84eb954a1a86c4b60cbe44b 110 PANTHER PTHR30561 1 110 4.8E-53 T 25-04-2016 SMD_RS15260 b39600a9c84eb954a1a86c4b60cbe44b 110 SUPERFAMILY SSF103481 6 107 7.98E-22 T 25-04-2016 SMD_RS15260 b39600a9c84eb954a1a86c4b60cbe44b 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 9.4E-31 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 PANTHER PTHR32303:SF4 183 278 4.4E-143 T 25-04-2016 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 PANTHER PTHR32303:SF4 619 841 4.4E-143 T 25-04-2016 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 PANTHER PTHR32303:SF4 315 548 4.4E-143 T 25-04-2016 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 Pfam PF13360 PQQ-like domain 719 818 7.4E-7 T 25-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 Pfam PF13360 PQQ-like domain 404 550 1.4E-4 T 25-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SUPERFAMILY SSF50998 326 562 7.72E-143 T 25-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SUPERFAMILY SSF50998 180 277 7.72E-143 T 25-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SUPERFAMILY SSF50998 692 841 7.72E-143 T 25-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SUPERFAMILY SSF50998 599 665 7.72E-143 T 25-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 22 841 3.8E-294 T 25-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SMART SM00564 380 421 9.5 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SMART SM00564 764 797 8.7E-4 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SMART SM00564 696 736 270.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SMART SM00564 235 266 0.0029 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 SMART SM00564 522 553 36.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 PANTHER PTHR32303 183 278 4.4E-143 T 25-04-2016 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 PANTHER PTHR32303 619 841 4.4E-143 T 25-04-2016 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 PANTHER PTHR32303 315 548 4.4E-143 T 25-04-2016 SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 Pfam PF01011 PQQ enzyme repeat 240 274 2.5E-7 T 25-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 Gene3D G3DSA:2.140.10.10 323 574 4.1E-140 T 25-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 Gene3D G3DSA:2.140.10.10 183 286 4.1E-140 T 25-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SMD_RS14185 5f454d03fde948c76df00fc84b48aee2 842 Gene3D G3DSA:2.140.10.10 610 842 4.1E-140 T 25-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 PIRSF PIRSF039093 6 183 1.5E-82 T 25-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.966 T 25-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 Gene3D G3DSA:3.60.20.10 13 183 3.7E-79 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 4.5E-82 T 25-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 Pfam PF00227 Proteasome subunit 9 181 4.3E-22 T 25-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 PANTHER PTHR32194 4 183 4.6E-120 T 25-04-2016 SMD_RS18960 eb16c558575a6b2dc11933d7b2bdd1fc 183 SUPERFAMILY SSF56235 9 182 2.04E-54 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 PANTHER PTHR23046 8 167 8.0E-84 T 25-04-2016 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 Gene3D G3DSA:3.40.50.7700 7 164 2.8E-72 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.073 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 PANTHER PTHR23046:SF2 8 167 8.0E-84 T 25-04-2016 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 PIRSF PIRSF001338 6 167 3.7E-65 T 25-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 SMART SM01001 8 159 1.7E-98 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 4.9E-64 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 Pfam PF00731 AIR carboxylase 10 157 4.3E-62 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMD_RS07530 7960e7133a74197bd8fae8b48322d38a 167 SUPERFAMILY SSF52255 9 165 8.63E-65 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 SMART SM00342 196 278 1.4E-26 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 Gene3D G3DSA:1.10.10.60 175 233 3.6E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 Gene3D G3DSA:1.10.10.60 234 277 2.1E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 1.8E-6 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 1.8E-6 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 SUPERFAMILY SSF46689 233 280 3.05E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 Gene3D G3DSA:2.60.120.10 34 101 1.2E-5 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 PANTHER PTHR11019 23 286 1.2E-74 T 25-04-2016 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 PANTHER PTHR11019:SF53 23 286 1.2E-74 T 25-04-2016 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 SUPERFAMILY SSF51182 37 210 3.82E-12 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 274 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 Pfam PF12833 Helix-turn-helix domain 202 280 1.2E-24 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS07115 e5dd3ee6ca2fd81eadbac40405be8828 302 Pfam PF02311 AraC-like ligand binding domain 50 180 7.5E-8 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS18145 444bc93d6efef4076ee63e76ba9dc95a 155 Pfam PF04304 Protein of unknown function (DUF454) 2 116 3.6E-34 T 25-04-2016 IPR007401 Protein of unknown function DUF454 SMD_RS18145 444bc93d6efef4076ee63e76ba9dc95a 155 PANTHER PTHR35813 1 122 3.8E-24 T 25-04-2016 SMD_RS18145 444bc93d6efef4076ee63e76ba9dc95a 155 PANTHER PTHR35813:SF1 1 122 3.8E-24 T 25-04-2016 SMD_RS14035 c728f0fcd4121849819113d46776ccab 130 SUPERFAMILY SSF143100 2 64 1.05E-16 T 25-04-2016 SMD_RS14035 c728f0fcd4121849819113d46776ccab 130 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 127 6.2E-40 T 25-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system SMD_RS17970 05dc61a2329c330146026231ecd82464 442 SUPERFAMILY SSF53092 9 181 7.06E-55 T 25-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SMD_RS17970 05dc61a2329c330146026231ecd82464 442 SMART SM01011 9 143 3.2E-66 T 25-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SMD_RS17970 05dc61a2329c330146026231ecd82464 442 PANTHER PTHR10804 8 441 3.6E-154 T 25-04-2016 SMD_RS17970 05dc61a2329c330146026231ecd82464 442 Gene3D G3DSA:3.90.230.10 186 437 5.9E-81 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS17970 05dc61a2329c330146026231ecd82464 442 SUPERFAMILY SSF55920 182 440 3.14E-80 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS17970 05dc61a2329c330146026231ecd82464 442 Gene3D G3DSA:3.40.350.10 8 185 5.5E-55 T 25-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SMD_RS17970 05dc61a2329c330146026231ecd82464 442 Pfam PF00557 Metallopeptidase family M24 188 419 1.8E-59 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS17970 05dc61a2329c330146026231ecd82464 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 133 6.2E-38 T 25-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SMD_RS17970 05dc61a2329c330146026231ecd82464 442 PANTHER PTHR10804:SF17 8 441 3.6E-154 T 25-04-2016 SMD_RS15565 8f726e40d89c895e1043af773555581e 672 SUPERFAMILY SSF117892 67 185 2.88E-8 T 25-04-2016 IPR001107 Band 7 domain SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806:SF2 419 438 4.6E-116 T 25-04-2016 SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806:SF2 1 316 4.6E-116 T 25-04-2016 SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806:SF2 537 566 4.6E-116 T 25-04-2016 SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806:SF2 334 403 4.6E-116 T 25-04-2016 SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806 419 438 4.6E-116 T 25-04-2016 IPR027705 Flotillin family SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806 1 316 4.6E-116 T 25-04-2016 IPR027705 Flotillin family SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806 537 566 4.6E-116 T 25-04-2016 IPR027705 Flotillin family SMD_RS15565 8f726e40d89c895e1043af773555581e 672 PANTHER PTHR13806 334 403 4.6E-116 T 25-04-2016 IPR027705 Flotillin family SMD_RS11465 406a8b04f63eb177966e012bd99ed18e 251 Gene3D G3DSA:1.25.40.10 92 225 4.3E-5 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS11465 406a8b04f63eb177966e012bd99ed18e 251 PIRSF PIRSF030959 1 251 3.9E-74 T 25-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing SMD_RS11465 406a8b04f63eb177966e012bd99ed18e 251 SUPERFAMILY SSF48452 91 209 4.91E-6 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00710 066e89dcd015589a9c5aa0c853ea15cb 499 PANTHER PTHR35004:SF2 1 440 8.6E-67 T 25-04-2016 SMD_RS00710 066e89dcd015589a9c5aa0c853ea15cb 499 Pfam PF13384 Homeodomain-like domain 12 37 1.0E-5 T 25-04-2016 SMD_RS00710 066e89dcd015589a9c5aa0c853ea15cb 499 SUPERFAMILY SSF46689 6 75 9.32E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS00710 066e89dcd015589a9c5aa0c853ea15cb 499 Gene3D G3DSA:1.10.10.10 13 38 3.1E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00710 066e89dcd015589a9c5aa0c853ea15cb 499 Pfam PF00665 Integrase core domain 124 249 4.4E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS00710 066e89dcd015589a9c5aa0c853ea15cb 499 PANTHER PTHR35004 1 440 8.6E-67 T 25-04-2016 SMD_RS02950 066e89dcd015589a9c5aa0c853ea15cb 499 PANTHER PTHR35004:SF2 1 440 8.6E-67 T 25-04-2016 SMD_RS02950 066e89dcd015589a9c5aa0c853ea15cb 499 Pfam PF13384 Homeodomain-like domain 12 37 1.0E-5 T 25-04-2016 SMD_RS02950 066e89dcd015589a9c5aa0c853ea15cb 499 SUPERFAMILY SSF46689 6 75 9.32E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS02950 066e89dcd015589a9c5aa0c853ea15cb 499 Gene3D G3DSA:1.10.10.10 13 38 3.1E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02950 066e89dcd015589a9c5aa0c853ea15cb 499 Pfam PF00665 Integrase core domain 124 249 4.4E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS02950 066e89dcd015589a9c5aa0c853ea15cb 499 PANTHER PTHR35004 1 440 8.6E-67 T 25-04-2016 SMD_RS07705 066e89dcd015589a9c5aa0c853ea15cb 499 PANTHER PTHR35004:SF2 1 440 8.6E-67 T 25-04-2016 SMD_RS07705 066e89dcd015589a9c5aa0c853ea15cb 499 Pfam PF13384 Homeodomain-like domain 12 37 1.0E-5 T 25-04-2016 SMD_RS07705 066e89dcd015589a9c5aa0c853ea15cb 499 SUPERFAMILY SSF46689 6 75 9.32E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07705 066e89dcd015589a9c5aa0c853ea15cb 499 Gene3D G3DSA:1.10.10.10 13 38 3.1E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07705 066e89dcd015589a9c5aa0c853ea15cb 499 Pfam PF00665 Integrase core domain 124 249 4.4E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS07705 066e89dcd015589a9c5aa0c853ea15cb 499 PANTHER PTHR35004 1 440 8.6E-67 T 25-04-2016 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 Pfam PF01431 Peptidase family M13 500 700 9.9E-62 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 492 504 2.9E-18 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 531 547 2.9E-18 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 602 613 2.9E-18 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 510 522 2.9E-18 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 PANTHER PTHR11733 1 703 0.0 T 25-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 PANTHER PTHR11733:SF145 1 703 0.0 T 25-04-2016 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 Pfam PF05649 Peptidase family M13 65 448 1.9E-92 T 25-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 Gene3D G3DSA:3.40.390.10 330 451 2.6E-98 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 Gene3D G3DSA:3.40.390.10 491 703 2.6E-98 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS02585 e39107990e7877614784a5beb2a62cd7 703 SUPERFAMILY SSF55486 50 703 1.81E-195 T 25-04-2016 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 Gene3D G3DSA:3.40.30.10 5 180 2.8E-62 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 SUPERFAMILY SSF52833 4 179 1.12E-56 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 PANTHER PTHR11592 5 181 6.8E-75 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 3.8E-18 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.8E-18 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.8E-18 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 PIRSF PIRSF000303 1 181 1.1E-58 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 PANTHER PTHR11592:SF40 5 181 6.8E-75 T 25-04-2016 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 Pfam PF00255 Glutathione peroxidase 9 111 3.8E-36 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS21875 1a9daee231af155fbb16945fe8552e61 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 25-04-2016 IPR029759 Glutathione peroxidase active site SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 Pfam PF17203 Single cache domain 3 57 175 2.5E-7 T 25-04-2016 IPR033463 Single cache domain 3 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 SUPERFAMILY SSF158472 218 267 2.75E-9 T 25-04-2016 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 437 6.1E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 Gene3D G3DSA:3.30.70.270 278 450 8.3E-50 T 25-04-2016 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 SUPERFAMILY SSF55073 282 443 1.49E-43 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 Pfam PF00563 EAL domain 458 694 1.7E-71 T 25-04-2016 IPR001633 EAL domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 SMART SM00267 266 442 3.8E-51 T 25-04-2016 IPR000160 GGDEF domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 SMART SM00052 452 699 2.3E-105 T 25-04-2016 IPR001633 EAL domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 Pfam PF00672 HAMP domain 199 267 6.1E-14 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 PANTHER PTHR33121 406 706 9.0E-72 T 25-04-2016 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 PANTHER PTHR33121 142 162 9.0E-72 T 25-04-2016 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 440 4.1E-36 T 25-04-2016 IPR000160 GGDEF domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 SUPERFAMILY SSF141868 457 705 3.66E-86 T 25-04-2016 IPR001633 EAL domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 PANTHER PTHR33121:SF13 406 706 9.0E-72 T 25-04-2016 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 PANTHER PTHR33121:SF13 142 162 9.0E-72 T 25-04-2016 SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 Gene3D G3DSA:3.20.20.450 455 706 2.1E-93 T 25-04-2016 IPR001633 EAL domain SMD_RS15030 cc6fcf05864bd82af6cf43ac36a0a658 708 SMART SM00304 218 271 3.3E-11 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 PANTHER PTHR10996 1 332 2.4E-151 T 25-04-2016 SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 Gene3D G3DSA:3.40.50.720 142 308 1.4E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 SUPERFAMILY SSF52283 2 138 1.66E-37 T 25-04-2016 SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 300 3.0E-56 T 25-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 25-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 SUPERFAMILY SSF51735 106 301 2.29E-59 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 25-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 Gene3D G3DSA:3.40.50.720 1 141 4.7E-46 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 25-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 PANTHER PTHR10996:SF161 1 332 2.4E-151 T 25-04-2016 SMD_RS06320 49b950be30fa78022f47c1ce033cec16 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 331 7.2E-30 T 25-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 2.3E-183 T 25-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 25-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PIRSF PIRSF001369 38 425 3.7E-150 T 25-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 Gene3D G3DSA:1.10.230.10 282 374 7.2E-40 T 25-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 SUPERFAMILY SSF48256 8 423 5.63E-154 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 Gene3D G3DSA:1.10.580.10 53 281 5.5E-92 T 25-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 1.5E-129 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PANTHER PTHR11739:SF13 7 423 2.4E-187 T 25-04-2016 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PRINTS PR00143 Citrate synthase signature 360 376 4.1E-53 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PRINTS PR00143 Citrate synthase signature 220 235 4.1E-53 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PRINTS PR00143 Citrate synthase signature 242 270 4.1E-53 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PRINTS PR00143 Citrate synthase signature 297 317 4.1E-53 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PRINTS PR00143 Citrate synthase signature 380 394 4.1E-53 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PRINTS PR00143 Citrate synthase signature 166 179 4.1E-53 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS17845 62caf452e10e9645617d91ccc493c4f3 425 PANTHER PTHR11739 7 423 2.4E-187 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 Gene3D G3DSA:3.40.30.10 1 83 7.6E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 SUPERFAMILY SSF47616 78 208 7.78E-38 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 PANTHER PTHR11260 2 201 3.3E-69 T 25-04-2016 SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 SUPERFAMILY SSF52833 1 84 5.83E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 4.9E-15 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 197 4.3E-13 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 PANTHER PTHR11260:SF178 2 201 3.3E-69 T 25-04-2016 SMD_RS21040 71f1ee94484b882c5ade489dd10433e5 229 Gene3D G3DSA:1.20.1050.10 84 201 7.1E-52 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 SUPERFAMILY SSF52374 6 161 1.07E-44 T 25-04-2016 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 34.955 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 160 3.8E-56 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PANTHER PTHR21342:SF1 1 160 3.1E-76 T 25-04-2016 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PANTHER PTHR21342 1 160 3.1E-76 T 25-04-2016 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.2E-49 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.2E-49 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.2E-49 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.2E-49 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.2E-49 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 64 2.5E-16 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 Gene3D G3DSA:3.40.50.620 6 162 6.0E-53 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS09225 ea8de4bb5c9003d8d44c41a834f67fe0 169 Pfam PF01467 Cytidylyltransferase-like 10 138 6.6E-21 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 PANTHER PTHR30118 1 305 6.0E-110 T 25-04-2016 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 PANTHER PTHR30118:SF5 1 305 6.0E-110 T 25-04-2016 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 SUPERFAMILY SSF53850 93 294 1.03E-28 T 25-04-2016 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 Gene3D G3DSA:3.40.190.10 170 267 2.2E-25 T 25-04-2016 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.2E-13 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 Pfam PF03466 LysR substrate binding domain 95 296 6.8E-15 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 Gene3D G3DSA:3.40.190.10 93 169 6.2E-19 T 25-04-2016 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 Gene3D G3DSA:3.40.190.10 272 300 6.2E-19 T 25-04-2016 SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 Gene3D G3DSA:1.10.10.10 3 83 7.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18510 43d4b0d9c295934173eed59276cdc9e1 305 SUPERFAMILY SSF46785 2 83 3.46E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 PANTHER PTHR35093 237 475 6.0E-139 T 25-04-2016 SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 PANTHER PTHR35093 6 206 6.0E-139 T 25-04-2016 SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 PANTHER PTHR35093:SF2 237 475 6.0E-139 T 25-04-2016 SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 PANTHER PTHR35093:SF2 6 206 6.0E-139 T 25-04-2016 SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 SUPERFAMILY SSF56935 29 475 2.66E-86 T 25-04-2016 SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 475 7.1E-120 T 25-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SMD_RS02000 f8fadaba9ec0eed9bb7d7fae44fabdce 475 Gene3D G3DSA:2.40.160.60 31 475 6.8E-111 T 25-04-2016 SMD_RS21670 f5095bc9a45364daa60b1d42d5f9fcf0 284 Gene3D G3DSA:3.40.50.1820 8 279 2.0E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21670 f5095bc9a45364daa60b1d42d5f9fcf0 284 SUPERFAMILY SSF53474 5 279 3.46E-49 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21670 f5095bc9a45364daa60b1d42d5f9fcf0 284 PANTHER PTHR10992:SF909 21 280 3.7E-43 T 25-04-2016 SMD_RS21670 f5095bc9a45364daa60b1d42d5f9fcf0 284 Pfam PF12697 Alpha/beta hydrolase family 27 271 2.4E-16 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS21670 f5095bc9a45364daa60b1d42d5f9fcf0 284 PANTHER PTHR10992 21 280 3.7E-43 T 25-04-2016 SMD_RS14860 982216d304d920840e907a4d19e24880 581 SMART SM00382 396 571 2.0E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS14860 982216d304d920840e907a4d19e24880 581 Pfam PF00664 ABC transporter transmembrane region 44 285 3.1E-21 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS14860 982216d304d920840e907a4d19e24880 581 Gene3D G3DSA:3.40.50.300 384 574 6.0E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14860 982216d304d920840e907a4d19e24880 581 SUPERFAMILY SSF90123 27 347 9.16E-44 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS14860 982216d304d920840e907a4d19e24880 581 Pfam PF00005 ABC transporter 387 525 2.6E-24 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS14860 982216d304d920840e907a4d19e24880 581 Gene3D G3DSA:1.20.1560.10 27 345 2.8E-34 T 25-04-2016 SMD_RS14860 982216d304d920840e907a4d19e24880 581 PANTHER PTHR24221:SF261 19 574 9.8E-131 T 25-04-2016 SMD_RS14860 982216d304d920840e907a4d19e24880 581 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS14860 982216d304d920840e907a4d19e24880 581 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 38 565 3.9E-157 T 25-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 SMD_RS14860 982216d304d920840e907a4d19e24880 581 SUPERFAMILY SSF52540 381 574 2.62E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14860 982216d304d920840e907a4d19e24880 581 PANTHER PTHR24221 19 574 9.8E-131 T 25-04-2016 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PANTHER PTHR32305 373 536 1.6E-99 T 25-04-2016 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PANTHER PTHR32305 714 1146 1.6E-99 T 25-04-2016 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PRINTS PR00394 RHS protein signature 1372 1392 2.7E-8 T 25-04-2016 IPR001826 RHS protein SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PRINTS PR00394 RHS protein signature 1395 1414 2.7E-8 T 25-04-2016 IPR001826 RHS protein SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 901 942 1.3E-6 T 25-04-2016 IPR006530 YD repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 362 399 9.3E-5 T 25-04-2016 IPR006530 YD repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 836 874 5.3E-7 T 25-04-2016 IPR006530 YD repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 771 808 0.0023 T 25-04-2016 IPR006530 YD repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 755 2.2E-5 T 25-04-2016 IPR006530 YD repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PANTHER PTHR32305:SF6 714 1146 1.6E-99 T 25-04-2016 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 1019 1058 2.0E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 944 977 2.7E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 1042 1073 9.2E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 1157 1195 4.6E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 856 893 1.5E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 835 869 1.4E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 361 398 2.6E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 725 753 4.6E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 Pfam PF05593 RHS Repeat 901 935 1.2E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1349 1428 4.3E-18 T 25-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PANTHER PTHR32305:SF6 1171 1428 1.6E-99 T 25-04-2016 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PANTHER PTHR32305:SF6 373 536 1.6E-99 T 25-04-2016 SMD_RS12810 3831f6a5690fd6438caa65db0430b1bc 1429 PANTHER PTHR32305 1171 1428 1.6E-99 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:3.30.930.10 490 688 4.3E-58 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:3.30.70.380 701 792 1.2E-28 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 786 43.273 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 PANTHER PTHR10947:SF0 2 792 5.6E-284 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 PANTHER PTHR10947 2 792 5.6E-284 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 699 792 8.6E-27 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SUPERFAMILY SSF46955 403 474 2.38E-18 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Pfam PF03484 tRNA synthetase B5 domain 404 470 2.1E-18 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:3.30.56.20 401 474 4.5E-25 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SMART SM00896 699 792 3.3E-40 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SMART SM00874 402 470 7.7E-29 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SMART SM00873 211 384 1.2E-81 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:3.30.56.10 1 38 3.1E-22 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:3.30.56.10 154 183 3.1E-22 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 792 6.4E-224 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:2.40.50.140 42 152 4.0E-41 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Pfam PF01588 Putative tRNA binding domain 45 144 3.4E-25 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SUPERFAMILY SSF50249 37 186 8.57E-46 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SUPERFAMILY SSF55681 466 688 6.96E-48 T 25-04-2016 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SUPERFAMILY SSF54991 695 792 6.15E-28 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Gene3D G3DSA:3.50.40.10 201 391 6.2E-73 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 Pfam PF03483 B3/4 domain 212 384 2.0E-62 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SMD_RS15320 a72cb777e3f2f5b0c6ecd3ada5b91649 793 SUPERFAMILY SSF56037 200 394 7.85E-67 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 18.324 T 25-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.283 T 25-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 SUPERFAMILY SSF101386 117 205 1.33E-21 T 25-04-2016 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 4.0E-30 T 25-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 200 1.5E-26 T 25-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 SUPERFAMILY SSF141734 14 113 2.09E-41 T 25-04-2016 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-17 T 25-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 125 205 2.7E-12 T 25-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMD_RS10295 7f079754d7d0557e76ac0a5c7cc11667 206 PANTHER PTHR21256 1 206 1.9E-98 T 25-04-2016 SMD_RS02375 d9cd24bb5f07ea939dfabfd9b6b9088f 159 Gene3D G3DSA:3.10.450.50 33 147 3.0E-7 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS02375 d9cd24bb5f07ea939dfabfd9b6b9088f 159 Pfam PF14534 Domain of unknown function (DUF4440) 27 146 7.1E-14 T 25-04-2016 IPR027843 Domain of unknown function DUF4440 SMD_RS02375 d9cd24bb5f07ea939dfabfd9b6b9088f 159 SUPERFAMILY SSF54427 15 147 6.21E-15 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Gene3D G3DSA:3.30.565.10 722 881 2.6E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Pfam PF00512 His Kinase A (phospho-acceptor) domain 653 719 9.1E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 SUPERFAMILY SSF52402 250 359 6.8E-12 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 229 2.6E-95 T 25-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423 615 630 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423 1 196 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423 647 878 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423 249 288 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Gene3D G3DSA:1.10.287.130 647 716 2.2E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Gene3D G3DSA:3.40.50.620 248 360 1.3E-13 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Pfam PF00582 Universal stress protein family 249 359 7.7E-6 T 25-04-2016 IPR006016 UspA GO:0006950 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 SMART SM00387 764 876 7.0E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 SMART SM00388 652 720 7.7E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 SUPERFAMILY SSF55874 710 877 6.16E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423:SF562 615 630 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423:SF562 1 196 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423:SF562 647 878 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PANTHER PTHR24423:SF562 249 288 2.5E-195 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 SUPERFAMILY SSF47384 647 720 7.26E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 SUPERFAMILY SSF52540 11 221 4.04E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 829 5.6E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 815 5.6E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 873 5.6E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 853 5.6E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Gene3D G3DSA:1.20.120.620 396 493 3.4E-24 T 25-04-2016 SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 769 874 6.3E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Pfam PF13493 Domain of unknown function (DUF4118) 397 495 1.5E-19 T 25-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain SMD_RS01855 06a1c837732ef80f8f1f756ef4ba2546 886 Gene3D G3DSA:3.40.50.300 20 228 6.4E-98 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 SUPERFAMILY SSF56176 4 216 1.02E-66 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 Pfam PF01565 FAD binding domain 40 178 2.1E-36 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 SUPERFAMILY SSF55103 191 461 7.03E-59 T 25-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 PANTHER PTHR11748 1 460 1.4E-210 T 25-04-2016 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 Gene3D G3DSA:3.30.465.10 96 214 7.3E-36 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 Gene3D G3DSA:3.30.43.10 3 94 3.0E-23 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 PANTHER PTHR11748:SF76 1 460 1.4E-210 T 25-04-2016 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 Gene3D G3DSA:1.10.45.10 420 459 3.0E-11 T 25-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SMD_RS10415 aaa9eae4a665c8d061fa52af006a5f92 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 459 5.0E-58 T 25-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 PANTHER PTHR38101 1 188 2.3E-72 T 25-04-2016 SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 23.012 T 25-04-2016 IPR006839 Ribosome-associated, YjgA SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 Gene3D G3DSA:1.10.60.30 26 96 3.5E-24 T 25-04-2016 IPR023153 PSPTO4464-like domain SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 PANTHER PTHR38101:SF1 1 188 2.3E-72 T 25-04-2016 SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 Gene3D G3DSA:1.10.60.30 103 171 6.4E-33 T 25-04-2016 IPR023153 PSPTO4464-like domain SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 PIRSF PIRSF016183 1 174 3.5E-67 T 25-04-2016 IPR006839 Ribosome-associated, YjgA SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 Pfam PF04751 Protein of unknown function (DUF615) 13 167 2.6E-49 T 25-04-2016 IPR006839 Ribosome-associated, YjgA SMD_RS15840 c54972d1551f324cc08a4d6abe3882f5 195 SUPERFAMILY SSF158710 27 170 1.11E-46 T 25-04-2016 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 Gene3D G3DSA:1.10.287.950 458 662 2.7E-58 T 25-04-2016 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 618 647 1.8E-48 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 464 493 1.8E-48 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 568 1.8E-48 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 570 599 1.8E-48 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 SUPERFAMILY SSF55785 218 342 5.5E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 499 689 4.1E-57 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 Gene3D G3DSA:3.30.450.20 227 342 2.8E-8 T 25-04-2016 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 SUPERFAMILY SSF58104 410 691 1.92E-67 T 25-04-2016 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 SMART SM00283 443 690 1.5E-88 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 PANTHER PTHR32089:SF63 235 693 8.9E-142 T 25-04-2016 SMD_RS21675 b8f95a087a267283f14d5a3092031a6b 701 PANTHER PTHR32089 235 693 8.9E-142 T 25-04-2016 SMD_RS16020 3c8d7cd8bc238931c8ed50adfa2e569e 205 Pfam PF06197 Protein of unknown function (DUF998) 13 193 1.8E-13 T 25-04-2016 IPR009339 Protein of unknown function DUF998 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 SUPERFAMILY SSF52172 9 113 2.56E-27 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 PIRSF PIRSF000876 6 357 2.4E-135 T 25-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 SMART SM00448 9 132 1.1E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 Gene3D G3DSA:3.40.50.2300 8 115 8.3E-29 T 25-04-2016 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 9 356 40.841 T 25-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 PANTHER PTHR24421 10 356 2.2E-165 T 25-04-2016 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 Gene3D G3DSA:3.40.50.180 166 356 9.7E-79 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 Pfam PF01339 CheB methylesterase 173 351 3.5E-58 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 PANTHER PTHR24421:SF21 10 356 2.2E-165 T 25-04-2016 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 SUPERFAMILY SSF52738 168 355 6.54E-70 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10660 f5028e9f75d6d46572fcacff0f302772 357 Pfam PF00072 Response regulator receiver domain 11 113 1.3E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 PANTHER PTHR12526 349 466 3.3E-109 T 25-04-2016 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 PANTHER PTHR12526 154 287 3.3E-109 T 25-04-2016 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 466 1.6E-223 T 25-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 SUPERFAMILY SSF53448 4 280 3.05E-72 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 Gene3D G3DSA:2.60.120.10 354 466 2.8E-50 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 Gene3D G3DSA:3.90.550.10 2 269 1.3E-101 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 Pfam PF00483 Nucleotidyl transferase 6 283 2.6E-70 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 SUPERFAMILY SSF51182 183 466 2.59E-90 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 PANTHER PTHR12526:SF387 349 466 3.3E-109 T 25-04-2016 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 PANTHER PTHR12526:SF387 154 287 3.3E-109 T 25-04-2016 SMD_RS03000 03115ddbdb8eb5a28dbf6db9f67b4e17 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 5.8E-75 T 25-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SMD_RS20830 31bbae5e3ba4f58306ebdc58f8707a48 231 SUPERFAMILY SSF53271 67 230 4.28E-26 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS20830 31bbae5e3ba4f58306ebdc58f8707a48 231 PANTHER PTHR11907 7 231 2.2E-56 T 25-04-2016 SMD_RS20830 31bbae5e3ba4f58306ebdc58f8707a48 231 PANTHER PTHR11907:SF9 7 231 2.2E-56 T 25-04-2016 SMD_RS20830 31bbae5e3ba4f58306ebdc58f8707a48 231 Gene3D G3DSA:3.40.50.2020 68 230 3.1E-25 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 25-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 Pfam PF00701 Dihydrodipicolinate synthetase family 3 281 1.2E-79 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PANTHER PTHR12128 3 296 2.0E-119 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 25-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 Gene3D G3DSA:3.20.20.70 3 285 2.6E-101 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 SMART SM01130 2 289 2.3E-110 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PIRSF PIRSF001365 2 295 4.2E-88 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 53.378 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 SUPERFAMILY SSF51569 3 284 2.41E-90 T 25-04-2016 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 278 7.7E-80 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PANTHER PTHR12128:SF34 3 296 2.0E-119 T 25-04-2016 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.4E-26 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.4E-26 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.4E-26 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS09035 f6c7e41cafed8d9b977aaf000fe29d2e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.4E-26 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 SUPERFAMILY SSF55048 124 181 1.06E-7 T 25-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 301 4.8E-14 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 298 1.0E-94 T 25-04-2016 IPR017554 Malonate decarboxylase, McdH subunit SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 Gene3D G3DSA:3.40.366.10 185 290 3.0E-41 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 Gene3D G3DSA:3.40.366.10 3 116 3.0E-41 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 Pfam PF00698 Acyl transferase domain 6 274 3.3E-16 T 25-04-2016 IPR014043 Acyl transferase SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 Gene3D G3DSA:3.30.70.250 123 184 1.5E-7 T 25-04-2016 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 PANTHER PTHR10982 1 305 4.6E-100 T 25-04-2016 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 PANTHER PTHR10982:SF16 1 305 4.6E-100 T 25-04-2016 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 SUPERFAMILY SSF52151 180 299 4.97E-44 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS06015 943250a4ae03a59f2231bdf29bd5e2ac 306 SUPERFAMILY SSF52151 3 116 4.97E-44 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 Pfam PF01381 Helix-turn-helix 52 95 5.1E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 PANTHER PTHR40275 5 99 3.6E-30 T 25-04-2016 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 Gene3D G3DSA:1.10.260.40 40 96 1.3E-9 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 SUPERFAMILY SSF47413 36 95 2.16E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 PANTHER PTHR40275:SF1 5 99 3.6E-30 T 25-04-2016 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 8 97 9.8E-36 T 25-04-2016 IPR014057 Addiction module antidote protein, HI1420 SMD_RS01575 3beea1217b74bf2aba98107ecbc35b3a 100 SMART SM00530 45 98 5.4E-4 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 PIRSF PIRSF001619 1 320 2.5E-129 T 25-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 SUPERFAMILY SSF102114 7 315 7.85E-92 T 25-04-2016 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 PANTHER PTHR22976:SF1 9 322 3.0E-158 T 25-04-2016 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.615 T 25-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 TIGRFAM TIGR00433 bioB: biotin synthase 16 313 3.5E-121 T 25-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 PANTHER PTHR22976 9 322 3.0E-158 T 25-04-2016 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 SMART SM00729 45 257 2.6E-34 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 313 4.8E-19 T 25-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 Pfam PF04055 Radical SAM superfamily 51 203 2.1E-15 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 Gene3D G3DSA:3.20.20.70 7 314 1.6E-102 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS20850 56c5fffae410acd32b18c32a4604327d 347 SMART SM00876 222 314 1.4E-47 T 25-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 Pfam PF00355 Rieske [2Fe-2S] domain 61 185 4.2E-10 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 138 6.3E-7 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 158 170 6.3E-7 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 171 183 6.3E-7 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 SUPERFAMILY SSF50022 34 198 2.62E-37 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 Gene3D G3DSA:1.20.5.510 11 44 7.0E-7 T 25-04-2016 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 7 44 7.3E-16 T 25-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 199 1.3E-66 T 25-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 PANTHER PTHR10134:SF8 8 203 1.6E-109 T 25-04-2016 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 Gene3D G3DSA:2.102.10.10 50 204 3.1E-31 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS07485 3721426621e38749ecc8e0efb8fba795 206 PANTHER PTHR10134 8 203 1.6E-109 T 25-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 SMD_RS01785 df51d71d949cd21d155a54aee69ec310 232 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 217 1.3E-26 T 25-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SMD_RS01785 df51d71d949cd21d155a54aee69ec310 232 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 11 211 9.2E-32 T 25-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SMD_RS03455 ee939d5eee84ef54f2f275720f82d730 441 Pfam PF01098 Cell cycle protein 21 373 1.5E-98 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMD_RS03455 ee939d5eee84ef54f2f275720f82d730 441 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 2.8E-123 T 25-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SMD_RS03455 ee939d5eee84ef54f2f275720f82d730 441 PANTHER PTHR30474:SF2 1 393 7.6E-164 T 25-04-2016 SMD_RS03455 ee939d5eee84ef54f2f275720f82d730 441 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 17 383 37.358 T 25-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SMD_RS03455 ee939d5eee84ef54f2f275720f82d730 441 PANTHER PTHR30474 1 393 7.6E-164 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 421 3.2E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 PANTHER PTHR10799 145 533 2.4E-83 T 25-04-2016 SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Gene3D G3DSA:3.30.70.270 265 429 1.6E-59 T 25-04-2016 SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Gene3D G3DSA:3.20.20.450 436 682 1.4E-99 T 25-04-2016 IPR001633 EAL domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 SUPERFAMILY SSF141868 439 682 1.19E-90 T 25-04-2016 IPR001633 EAL domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Pfam PF00563 EAL domain 439 674 1.8E-73 T 25-04-2016 IPR001633 EAL domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 SUPERFAMILY SSF55073 268 425 3.37E-50 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 PANTHER PTHR10799:SF774 145 533 2.4E-83 T 25-04-2016 SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 109 2.7E-21 T 25-04-2016 IPR005330 MHYT domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 181 246 2.4E-10 T 25-04-2016 IPR005330 MHYT domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 114 168 3.2E-16 T 25-04-2016 IPR005330 MHYT domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 1.6E-48 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 SMART SM00267 252 423 3.0E-62 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06375 ca04c23c81a20a1741d4d046423733ed 685 SMART SM00052 433 679 9.3E-117 T 25-04-2016 IPR001633 EAL domain SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 SUPERFAMILY SSF51126 71 589 5.02E-21 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 SMART SM00869 731 992 6.2E-31 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 SUPERFAMILY SSF103515 713 1007 2.48E-33 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 Pfam PF03797 Autotransporter beta-domain 733 987 1.2E-35 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 474 1008 9.0E-62 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 Gene3D G3DSA:2.160.20.20 67 586 4.6E-36 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS18705 05920f840087c71662c49d14771c96fc 1008 Gene3D G3DSA:2.40.128.130 687 1008 3.0E-58 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04750 cf120f755bf8c0886e827a852b7b3649 212 SUPERFAMILY SSF52540 1 210 4.38E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04750 cf120f755bf8c0886e827a852b7b3649 212 Gene3D G3DSA:3.40.50.300 1 210 5.1E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04750 cf120f755bf8c0886e827a852b7b3649 212 PIRSF PIRSF009320 1 210 4.3E-50 T 25-04-2016 SMD_RS04750 cf120f755bf8c0886e827a852b7b3649 212 PANTHER PTHR13696 1 209 1.8E-63 T 25-04-2016 SMD_RS04750 cf120f755bf8c0886e827a852b7b3649 212 PANTHER PTHR13696:SF54 1 209 1.8E-63 T 25-04-2016 SMD_RS04750 cf120f755bf8c0886e827a852b7b3649 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 149 6.8E-27 T 25-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 PANTHER PTHR32552 28 687 4.2E-211 T 25-04-2016 SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 Gene3D G3DSA:2.40.170.20 155 687 3.3E-70 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 SUPERFAMILY SSF56935 29 687 6.28E-90 T 25-04-2016 SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 PANTHER PTHR32552:SF12 28 687 4.2E-211 T 25-04-2016 SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 Gene3D G3DSA:2.170.130.10 66 154 3.6E-15 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 55 687 2.4E-249 T 25-04-2016 IPR010100 TonB-dependent copper receptor SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 153 4.3E-12 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17620 c01357bc69d4ad75d5555c0544c3403f 687 Pfam PF00593 TonB dependent receptor 433 686 3.2E-28 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SUPERFAMILY SSF55781 117 287 2.84E-15 T 25-04-2016 IPR029016 GAF domain-like SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SUPERFAMILY SSF55073 533 692 1.1E-44 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SUPERFAMILY SSF55781 318 484 3.05E-22 T 25-04-2016 IPR029016 GAF domain-like SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Gene3D G3DSA:3.30.70.270 529 698 5.1E-52 T 25-04-2016 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Pfam PF00563 EAL domain 706 938 9.6E-66 T 25-04-2016 IPR001633 EAL domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 689 2.8E-38 T 25-04-2016 IPR000160 GGDEF domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Pfam PF00990 Diguanylate cyclase, GGDEF domain 528 685 8.0E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SMART SM00052 700 943 2.0E-91 T 25-04-2016 IPR001633 EAL domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SUPERFAMILY SSF141868 706 943 6.8E-78 T 25-04-2016 IPR001633 EAL domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Gene3D G3DSA:3.30.450.40 113 298 2.0E-15 T 25-04-2016 IPR029016 GAF domain-like SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Gene3D G3DSA:3.30.450.40 315 493 4.2E-22 T 25-04-2016 IPR029016 GAF domain-like SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Pfam PF13185 GAF domain 339 476 2.1E-14 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Pfam PF13185 GAF domain 138 283 1.7E-8 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SMART SM00065 138 293 0.028 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SMART SM00065 339 486 7.6E-10 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 SMART SM00267 517 690 9.9E-61 T 25-04-2016 IPR000160 GGDEF domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 Gene3D G3DSA:3.20.20.450 703 942 1.1E-80 T 25-04-2016 IPR001633 EAL domain SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 PANTHER PTHR33121 694 940 5.6E-61 T 25-04-2016 SMD_RS09540 47330866cbf8eee83e5dcc58694624e8 946 PANTHER PTHR33121:SF16 694 940 5.6E-61 T 25-04-2016 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 37.44 T 25-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 SUPERFAMILY SSF52418 78 339 9.16E-97 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 PANTHER PTHR11922:SF5 72 339 1.2E-114 T 25-04-2016 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 PANTHER PTHR11922:SF5 12 33 1.2E-114 T 25-04-2016 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 Pfam PF00591 Glycosyl transferase family, a/b domain 78 327 3.5E-94 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 SUPERFAMILY SSF47648 4 72 3.66E-18 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 PANTHER PTHR11922 72 339 1.2E-114 T 25-04-2016 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 PANTHER PTHR11922 12 33 1.2E-114 T 25-04-2016 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 3.8E-13 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 Gene3D G3DSA:1.20.970.10 6 72 7.7E-27 T 25-04-2016 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 Gene3D G3DSA:3.40.1030.10 77 339 7.6E-109 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMD_RS20265 36cdc4fcd1f3ac2223bb264a5f501641 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 336 6.4E-128 T 25-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 Gene3D G3DSA:3.40.30.10 139 277 3.9E-31 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 Pfam PF13098 Thioredoxin-like domain 146 272 2.6E-14 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 SUPERFAMILY SSF52833 120 276 2.62E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 PANTHER PTHR35272:SF2 42 280 2.5E-79 T 25-04-2016 SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 SUPERFAMILY SSF54423 51 109 4.71E-14 T 25-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 PANTHER PTHR35272 42 280 2.5E-79 T 25-04-2016 SMD_RS13505 1a1c2fa25ca9f6ecedba06ddc8c01b54 280 Gene3D G3DSA:3.10.450.70 76 111 3.9E-5 T 25-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal SMD_RS06020 d6626a5f25019409783c303c3612e61c 284 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 17 281 4.1E-92 T 25-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SMD_RS06020 d6626a5f25019409783c303c3612e61c 284 PANTHER PTHR30201 11 282 3.5E-83 T 25-04-2016 SMD_RS06020 d6626a5f25019409783c303c3612e61c 284 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 21 278 1.2E-74 T 25-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SMD_RS11270 a932bf73b74e9166a135ae6bc23be912 305 SUPERFAMILY SSF53850 37 264 1.13E-18 T 25-04-2016 SMD_RS11270 a932bf73b74e9166a135ae6bc23be912 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 100 252 5.1E-12 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS11270 a932bf73b74e9166a135ae6bc23be912 305 Gene3D G3DSA:3.40.190.10 145 211 2.4E-7 T 25-04-2016 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 6.2E-50 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PIRSF PIRSF004749 1 170 3.6E-58 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 29.681 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 SUPERFAMILY SSF56420 2 167 1.57E-61 T 25-04-2016 IPR023635 Peptide deformylase SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PRINTS PR01576 Peptide deformylase signature 92 103 1.0E-36 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PRINTS PR01576 Peptide deformylase signature 123 152 1.0E-36 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PRINTS PR01576 Peptide deformylase signature 36 65 1.0E-36 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PRINTS PR01576 Peptide deformylase signature 104 122 1.0E-36 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 Gene3D G3DSA:3.90.45.10 4 167 2.3E-63 T 25-04-2016 IPR023635 Peptide deformylase SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PANTHER PTHR10458:SF10 1 168 5.4E-97 T 25-04-2016 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 PANTHER PTHR10458 1 168 5.4E-97 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMD_RS19645 a1db45ea5000a9d463e670991ff43832 170 Pfam PF01327 Polypeptide deformylase 5 155 2.0E-50 T 25-04-2016 IPR023635 Peptide deformylase SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Gene3D G3DSA:3.30.450.20 465 590 5.2E-22 T 25-04-2016 SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SMART SM00086 553 593 0.71 T 25-04-2016 IPR001610 PAC motif SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SMART SM00086 427 468 5.6 T 25-04-2016 IPR001610 PAC motif SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 PANTHER PTHR33121 766 1017 1.4E-61 T 25-04-2016 SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SUPERFAMILY SSF141868 775 1016 1.16E-81 T 25-04-2016 IPR001633 EAL domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 477 600 3.6E-19 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 474 4.8E-8 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SUPERFAMILY SSF55073 610 750 2.67E-14 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 PANTHER PTHR33121:SF1 766 1017 1.4E-61 T 25-04-2016 SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SMART SM00052 765 1010 2.5E-96 T 25-04-2016 IPR001633 EAL domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Gene3D G3DSA:3.20.20.450 769 1017 2.0E-88 T 25-04-2016 IPR001633 EAL domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Pfam PF00563 EAL domain 774 1005 4.2E-67 T 25-04-2016 IPR001633 EAL domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SUPERFAMILY SSF55785 368 475 8.94E-15 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Gene3D G3DSA:3.30.450.20 347 464 1.3E-15 T 25-04-2016 SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SMART SM00267 593 755 1.3E-8 T 25-04-2016 IPR000160 GGDEF domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SMART SM00091 480 547 6.9E-8 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SMART SM00091 355 421 0.12 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Pfam PF13188 PAS domain 480 537 7.7E-9 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Pfam PF08447 PAS fold 378 460 1.5E-10 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 SUPERFAMILY SSF55785 466 591 5.86E-23 T 25-04-2016 IPR000014 PAS domain SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Gene3D G3DSA:3.30.70.270 606 760 1.4E-17 T 25-04-2016 SMD_RS02590 0d3c14351d09a7c5b29d09a794c6ca8f 1020 Pfam PF00990 Diguanylate cyclase, GGDEF domain 605 749 2.6E-10 T 25-04-2016 IPR000160 GGDEF domain SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 PANTHER PTHR21011 3 135 5.3E-41 T 25-04-2016 SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 21.529 T 25-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 Gene3D G3DSA:3.30.70.60 2 104 1.5E-39 T 25-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 Pfam PF01250 Ribosomal protein S6 4 92 3.1E-27 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 SUPERFAMILY SSF54995 1 104 6.93E-36 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 PANTHER PTHR21011:SF1 3 135 5.3E-41 T 25-04-2016 SMD_RS14245 4dd044b3df0aef59478c9117feb074d5 145 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 94 1.4E-33 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 SUPERFAMILY SSF53850 26 335 9.15E-101 T 25-04-2016 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 Gene3D G3DSA:3.40.190.10 26 168 6.6E-56 T 25-04-2016 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 Gene3D G3DSA:3.40.190.10 179 335 4.9E-33 T 25-04-2016 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 PANTHER PTHR30570:SF0 5 335 1.8E-137 T 25-04-2016 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 PANTHER PTHR30570 5 335 1.8E-137 T 25-04-2016 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 Pfam PF12849 PBP superfamily domain 22 307 2.7E-63 T 25-04-2016 IPR024370 PBP domain SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 334 1.2E-130 T 25-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SMD_RS07255 2f92b66229a0ea37d4ba70c30ecc5639 338 PIRSF PIRSF002756 3 337 4.5E-109 T 25-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 Gene3D G3DSA:1.10.540.10 4 130 5.3E-37 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 1.5E-30 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 PANTHER PTHR10909:SF152 7 387 2.0E-207 T 25-04-2016 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 SUPERFAMILY SSF56645 5 233 4.19E-76 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 222 3.4E-22 T 25-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 Gene3D G3DSA:2.40.110.10 131 222 6.9E-37 T 25-04-2016 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 Gene3D G3DSA:1.20.140.10 223 383 2.1E-43 T 25-04-2016 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 SUPERFAMILY SSF47203 234 383 1.55E-39 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 PANTHER PTHR10909 7 387 2.0E-207 T 25-04-2016 SMD_RS01040 84a3871c9fa9b65ca7c0c4c1d2e94b2d 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 128 6.8E-32 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS15750 545413815c08e28d9fe6417901a0961f 164 PANTHER PTHR33990 2 160 1.2E-99 T 25-04-2016 SMD_RS15750 545413815c08e28d9fe6417901a0961f 164 SUPERFAMILY SSF54593 4 157 1.69E-47 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS15750 545413815c08e28d9fe6417901a0961f 164 PIRSF PIRSF021700 1 159 7.0E-66 T 25-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase SMD_RS15750 545413815c08e28d9fe6417901a0961f 164 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 118 5.7E-46 T 25-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase SMD_RS15750 545413815c08e28d9fe6417901a0961f 164 Gene3D G3DSA:3.10.180.10 2 131 2.0E-39 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS15750 545413815c08e28d9fe6417901a0961f 164 PANTHER PTHR33990:SF3 2 160 1.2E-99 T 25-04-2016 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 PANTHER PTHR21152 3 361 3.9E-172 T 25-04-2016 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 SUPERFAMILY SSF53383 1 359 2.83E-111 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 1.9E-152 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 PANTHER PTHR21152:SF1 3 361 3.9E-172 T 25-04-2016 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 Gene3D G3DSA:3.40.640.10 17 256 1.9E-100 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 PIRSF PIRSF000525 1 361 4.0E-144 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 Gene3D G3DSA:3.90.1150.10 258 360 5.1E-39 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 48.977 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SMD_RS14010 3bb0a87b6a9e871203c0278fcba695dd 361 Pfam PF00266 Aminotransferase class-V 5 347 3.9E-52 T 25-04-2016 IPR000192 Aminotransferase class V domain SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 SMART SM00825 Beta-ketoacyl synthase 7 412 5.9E-15 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 Gene3D G3DSA:3.40.47.10 266 411 4.6E-53 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 Gene3D G3DSA:3.40.47.10 3 262 1.0E-53 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 SUPERFAMILY SSF53901 5 254 5.46E-52 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 SUPERFAMILY SSF53901 217 410 2.78E-63 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 158 174 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 366 8.1E-32 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 PANTHER PTHR11712 4 410 1.9E-105 T 25-04-2016 SMD_RS21235 65911ca1c9af8ddbf35eb8c16ff3ab83 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 249 5.6E-39 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 23.561 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 PANTHER PTHR33867 1 191 1.9E-47 T 25-04-2016 SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 PANTHER PTHR33867:SF1 1 191 1.9E-47 T 25-04-2016 SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 Gene3D G3DSA:3.30.300.70 3 86 1.3E-25 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 Pfam PF02576 Putative ribosome maturation factor RimP 11 155 1.4E-44 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 SUPERFAMILY SSF75420 5 89 1.31E-20 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 Gene3D G3DSA:2.30.30.180 96 156 2.2E-8 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SMD_RS15400 e8c2d38de8a48d7e20bfc7b1bc8bc443 196 SUPERFAMILY SSF74942 90 159 3.27E-12 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SMD_RS11020 4dcdd41c2b7cb8901e8486fcced62b5d 396 PANTHER PTHR32089 81 313 9.1E-33 T 25-04-2016 SMD_RS11020 4dcdd41c2b7cb8901e8486fcced62b5d 396 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 146 321 5.5E-30 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS11020 4dcdd41c2b7cb8901e8486fcced62b5d 396 Gene3D G3DSA:1.10.287.950 107 308 5.6E-41 T 25-04-2016 SMD_RS11020 4dcdd41c2b7cb8901e8486fcced62b5d 396 SMART SM00283 89 354 5.8E-14 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS11020 4dcdd41c2b7cb8901e8486fcced62b5d 396 SUPERFAMILY SSF58104 50 336 2.22E-44 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 Gene3D G3DSA:2.170.130.10 46 186 3.3E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 PANTHER PTHR32552:SF33 663 776 5.0E-56 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 PANTHER PTHR32552:SF33 1 635 5.0E-56 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 Gene3D G3DSA:2.40.170.20 187 630 4.2E-81 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 Gene3D G3DSA:2.40.170.20 664 775 4.2E-81 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 60 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 8.0E-12 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 SUPERFAMILY SSF56935 46 631 1.63E-106 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 SUPERFAMILY SSF56935 661 776 1.63E-106 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 PANTHER PTHR32552 663 776 5.0E-56 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 PANTHER PTHR32552 1 635 5.0E-56 T 25-04-2016 SMD_RS15125 886ed027038b2032c3adffd2000ebf93 776 Pfam PF00593 TonB dependent receptor 502 775 2.2E-21 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 SUPERFAMILY SSF51419 65 342 7.85E-62 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 364 554 5.9E-24 T 25-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 535 556 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 143 158 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 482 507 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 320 337 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 89 103 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 457 478 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 65 80 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 193 215 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01180 Arginine decarboxylase signature 169 190 1.3E-68 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 Gene3D G3DSA:2.40.37.10 448 576 1.2E-14 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 Gene3D G3DSA:2.40.37.10 329 353 1.2E-14 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PIRSF PIRSF001336 1 626 4.2E-240 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 81 341 1.0E-45 T 25-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 548 3.5E-15 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 120 132 3.5E-15 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 330 349 3.5E-15 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 97 115 3.5E-15 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 236 249 3.5E-15 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 SUPERFAMILY SSF50621 448 565 4.55E-7 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 624 3.7E-262 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 Gene3D G3DSA:3.20.20.10 67 328 8.4E-53 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 271 287 - T 25-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 625 42.226 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PANTHER PTHR11482 432 589 8.8E-249 T 25-04-2016 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PANTHER PTHR11482 1 363 8.8E-249 T 25-04-2016 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PANTHER PTHR11482:SF36 432 589 8.8E-249 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS20500 1f839b181b05afab28c3f47827ae7f44 629 PANTHER PTHR11482:SF36 1 363 8.8E-249 T 25-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 SUPERFAMILY SSF52172 1 172 2.64E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 PANTHER PTHR26402 1 220 1.9E-70 T 25-04-2016 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 Gene3D G3DSA:1.10.10.10 124 220 7.8E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 Gene3D G3DSA:3.40.50.2300 1 122 8.2E-34 T 25-04-2016 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 3.7E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 SMART SM00448 1 112 1.9E-33 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 SMART SM00862 145 218 5.1E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 PANTHER PTHR26402:SF518 1 220 1.9E-70 T 25-04-2016 SMD_RS06610 584eb7bf22cf16f12afdb4f5702f5c46 227 Pfam PF00072 Response regulator receiver domain 3 112 3.2E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SUPERFAMILY SSF48403 241 562 9.05E-47 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 PANTHER PTHR24133:SF14 16 572 0.0 T 25-04-2016 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 PANTHER PTHR24133:SF14 638 654 0.0 T 25-04-2016 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 PANTHER PTHR24133:SF14 694 1098 0.0 T 25-04-2016 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Pfam PF12796 Ankyrin repeats (3 copies) 321 401 4.1E-10 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Pfam PF12796 Ankyrin repeats (3 copies) 863 952 7.9E-10 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Pfam PF12796 Ankyrin repeats (3 copies) 708 789 2.1E-6 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Gene3D G3DSA:1.25.40.20 831 1093 3.7E-50 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Pfam PF00023 Ankyrin repeat 1042 1072 0.0039 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Pfam PF00023 Ankyrin repeat 444 472 0.0014 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 474 503 3.8 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 824 853 3800.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 1041 1070 0.061 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 687 722 2300.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 342 371 0.0052 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 375 405 5.7 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 306 338 78.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 759 788 0.012 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 726 755 1600.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 507 538 760.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 890 919 0.34 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 441 470 0.0038 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 237 266 1400.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 406 437 650.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 956 993 610.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 923 952 0.73 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 857 886 0.74 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SMART SM00248 274 303 330.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Gene3D G3DSA:1.25.40.20 634 681 3.6E-4 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Gene3D G3DSA:1.25.40.20 482 562 1.8E-11 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Gene3D G3DSA:1.25.40.20 240 380 4.2E-26 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Gene3D G3DSA:1.25.40.20 698 812 1.2E-25 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 SUPERFAMILY SSF48403 702 1093 2.1E-57 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 PANTHER PTHR24133 16 572 0.0 T 25-04-2016 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 PANTHER PTHR24133 638 654 0.0 T 25-04-2016 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 PANTHER PTHR24133 694 1098 0.0 T 25-04-2016 SMD_RS21220 f45924293f1bacc780c29428a48c1c2d 1112 Gene3D G3DSA:1.25.40.20 381 481 2.6E-25 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS21740 29000cf4a38f98626c773242722f577f 256 Pfam PF14237 Domain of unknown function (DUF4339) 6 49 9.6E-15 T 25-04-2016 IPR025640 Domain of unknown function DUF4339 SMD_RS21740 29000cf4a38f98626c773242722f577f 256 Pfam PF10947 Protein of unknown function (DUF2628) 134 206 4.8E-17 T 25-04-2016 IPR024399 Protein of unknown function DUF2628 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 SUPERFAMILY SSF56935 686 738 3.36E-104 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 SUPERFAMILY SSF56935 395 633 3.36E-104 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 SUPERFAMILY SSF56935 768 953 3.36E-104 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 SUPERFAMILY SSF56935 25 234 3.36E-104 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 SUPERFAMILY SSF56935 315 366 3.36E-104 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Gene3D G3DSA:2.170.130.10 51 177 3.2E-32 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 174 3.7E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 PANTHER PTHR30069 318 859 2.3E-125 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 PANTHER PTHR30069 9 290 2.3E-125 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Gene3D G3DSA:2.40.170.20 673 953 1.8E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Gene3D G3DSA:2.40.170.20 178 263 1.8E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Gene3D G3DSA:2.40.170.20 314 359 1.8E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Gene3D G3DSA:2.40.170.20 501 636 1.8E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Gene3D G3DSA:2.40.170.20 405 450 1.8E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 Pfam PF00593 TonB dependent receptor 604 950 3.5E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 PANTHER PTHR30069:SF7 318 859 2.3E-125 T 25-04-2016 SMD_RS18655 3795d038b1b95cfe5ceb8c0d0e064438 953 PANTHER PTHR30069:SF7 9 290 2.3E-125 T 25-04-2016 SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 SUPERFAMILY SSF63829 430 647 1.29E-8 T 25-04-2016 SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 SMART SM00387 897 990 2.0E-6 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 Gene3D G3DSA:2.120.10.30 113 345 2.7E-11 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 SUPERFAMILY SSF55874 865 988 3.14E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 Pfam PF07494 Two component regulator propeller 58 76 0.015 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 Gene3D G3DSA:3.30.565.10 899 988 7.8E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 Pfam PF07495 Y_Y_Y domain 687 746 7.7E-19 T 25-04-2016 IPR011123 Two component regulator three Y SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 SUPERFAMILY SSF63829 267 342 1.01E-10 T 25-04-2016 SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 SUPERFAMILY SSF63829 143 219 1.01E-10 T 25-04-2016 SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 PANTHER PTHR24421 744 1003 4.6E-38 T 25-04-2016 SMD_RS13240 7d8fdd19e96ed85362bfd966b8e19f6f 1009 Pfam PF07730 Histidine kinase 793 856 2.7E-11 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 PANTHER PTHR11941:SF53 264 350 1.9E-94 T 25-04-2016 SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 PANTHER PTHR11941:SF53 1 208 1.9E-94 T 25-04-2016 SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 367 2.3E-109 T 25-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 PANTHER PTHR11941 264 350 1.9E-94 T 25-04-2016 SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 PANTHER PTHR11941 1 208 1.9E-94 T 25-04-2016 SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 Gene3D G3DSA:3.90.226.10 282 350 3.5E-47 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 Gene3D G3DSA:3.90.226.10 24 219 3.5E-47 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 SUPERFAMILY SSF52096 24 213 1.55E-55 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01365 bd0e3671e2bb430f7f6a0b4d6186cb05 391 SUPERFAMILY SSF52096 282 352 1.55E-55 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 SMART SM00838 398 486 0.0045 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 9.4E-10 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Pfam PF00679 Elongation factor G C-terminus 399 477 1.7E-18 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Gene3D G3DSA:3.30.70.240 401 489 1.6E-19 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.5E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.5E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.5E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.5E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.5E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 7.2E-17 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 SUPERFAMILY SSF52540 2 205 1.11E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Gene3D G3DSA:3.30.70.870 292 369 3.8E-26 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 298.146 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Gene3D G3DSA:3.40.50.300 2 193 2.3E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 SUPERFAMILY SSF54980 292 370 6.47E-19 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 SUPERFAMILY SSF50447 165 288 1.49E-29 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 1.9E-294 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 3.6E-53 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Gene3D G3DSA:2.40.30.10 194 290 1.7E-23 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PANTHER PTHR23115 3 373 6.9E-277 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PANTHER PTHR23115 397 595 6.9E-277 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 SUPERFAMILY SSF54980 399 493 3.12E-23 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PANTHER PTHR23115:SF175 3 373 6.9E-277 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 PANTHER PTHR23115:SF175 397 595 6.9E-277 T 25-04-2016 SMD_RS16240 ab7c3359aff95543b564687309e5abb9 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 7.1E-52 T 25-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SMD_RS06595 9696c12fd2c1800b0244c8cf7f71675c 119 SUPERFAMILY SSF103481 39 117 3.79E-11 T 25-04-2016 SMD_RS06595 9696c12fd2c1800b0244c8cf7f71675c 119 Pfam PF00892 EamA-like transporter family 42 115 1.0E-8 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SUPERFAMILY SSF47226 5 129 5.36E-33 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Gene3D G3DSA:3.30.565.10 339 521 4.5E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SUPERFAMILY SSF47384 275 338 4.32E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 521 7.5E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 PANTHER PTHR22617 1 657 7.8E-239 T 25-04-2016 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 1.2E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 1.2E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 476 1.2E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 1.2E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SMART SM00073 4 102 2.8E-29 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SUPERFAMILY SSF50341 521 653 3.92E-32 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SUPERFAMILY SSF55874 339 520 2.88E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Gene3D G3DSA:1.20.120.160 2 141 1.9E-41 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Gene3D G3DSA:2.40.50.180 546 608 2.0E-11 T 25-04-2016 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Gene3D G3DSA:2.30.30.40 522 543 5.1E-22 T 25-04-2016 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Gene3D G3DSA:2.30.30.40 609 652 5.1E-22 T 25-04-2016 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SMART SM01231 274 337 1.3E-18 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Pfam PF01584 CheW-like domain 527 656 1.7E-27 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Gene3D G3DSA:1.10.287.560 274 338 5.6E-20 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 PANTHER PTHR22617:SF20 1 657 7.8E-239 T 25-04-2016 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SMART SM00387 382 522 2.4E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 SMART SM00260 514 653 9.6E-33 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Pfam PF01627 Hpt domain 10 100 8.9E-18 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10705 33fd583c63fa2e3a93532fd3a9343611 662 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 275 335 3.0E-15 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 4.2E-220 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 Pfam PF01578 Cytochrome C assembly protein 89 295 1.4E-52 T 25-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 639 9.8E-47 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 9.8E-47 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 9.8E-47 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 399 418 9.8E-47 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 9.8E-47 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 356 373 9.8E-47 T 25-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PANTHER PTHR30009:SF0 466 638 2.1E-286 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PANTHER PTHR30009:SF0 1 422 2.1E-286 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 8.7E-117 T 25-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 4.8E-93 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PANTHER PTHR30009 466 638 2.1E-286 T 25-04-2016 SMD_RS14825 2e5470f940ffcabc89530cbc8c362cf7 639 PANTHER PTHR30009 1 422 2.1E-286 T 25-04-2016 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Gene3D G3DSA:3.40.50.10070 27 155 3.2E-44 T 25-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Gene3D G3DSA:2.130.10.10 156 434 6.0E-75 T 25-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Pfam PF07676 WD40-like Beta Propeller Repeat 284 319 1.3E-12 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Pfam PF07676 WD40-like Beta Propeller Repeat 208 232 1.6E-6 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Pfam PF07676 WD40-like Beta Propeller Repeat 242 276 6.3E-9 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 SUPERFAMILY SSF52964 33 164 7.98E-35 T 25-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Hamap MF_00671 Protein TolB [tolB]. 8 432 36.154 T 25-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 Pfam PF04052 TolB amino-terminal domain 27 131 1.9E-28 T 25-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 SUPERFAMILY SSF69304 157 434 1.06E-55 T 25-04-2016 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 20 433 1.8E-157 T 25-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SMD_RS17190 1c579ff724fe4df28c523cd3bb502367 439 PANTHER PTHR36842 8 438 1.8E-84 T 25-04-2016 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 PANTHER PTHR11592:SF40 35 190 4.9E-77 T 25-04-2016 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 Pfam PF00255 Glutathione peroxidase 46 143 2.0E-32 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 PANTHER PTHR11592 35 190 4.9E-77 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 PIRSF PIRSF000303 13 192 1.6E-56 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 ProSitePatterns PS00460 Glutathione peroxidases active site. 57 72 - T 25-04-2016 IPR029759 Glutathione peroxidase active site SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 SUPERFAMILY SSF52833 36 189 4.42E-49 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 Gene3D G3DSA:3.40.30.10 37 190 3.3E-53 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 PRINTS PR01011 Glutathione peroxidase family signature 90 106 2.3E-14 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 PRINTS PR01011 Glutathione peroxidase family signature 151 160 2.3E-14 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14405 91c43adc20125ceecdcf9a84dfd76156 195 PRINTS PR01011 Glutathione peroxidase family signature 55 72 2.3E-14 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 SMART SM00382 34 221 4.3E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 PANTHER PTHR24220:SF578 7 236 5.5E-96 T 25-04-2016 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 PANTHER PTHR24220:SF578 418 574 5.5E-96 T 25-04-2016 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 Gene3D G3DSA:3.40.50.300 3 225 2.2E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 Pfam PF02687 FtsX-like permease family 527 640 2.1E-19 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 SUPERFAMILY SSF52540 5 226 4.79E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 Pfam PF00005 ABC transporter 25 173 6.0E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 PANTHER PTHR24220 7 236 5.5E-96 T 25-04-2016 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 PANTHER PTHR24220 418 574 5.5E-96 T 25-04-2016 SMD_RS12140 fede8a8447dac6ba6ce54fe886902459 647 Pfam PF12704 MacB-like periplasmic core domain 275 488 6.9E-37 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 Pfam PF03641 Possible lysine decarboxylase 199 338 4.0E-28 T 25-04-2016 IPR031100 LOG family SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 Gene3D G3DSA:3.30.1850.10 15 124 1.0E-41 T 25-04-2016 IPR027820 Domain of unknown function DUF4478 SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 Gene3D G3DSA:3.40.50.450 135 460 2.7E-109 T 25-04-2016 SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 PANTHER PTHR31223 96 393 4.2E-159 T 25-04-2016 SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 SUPERFAMILY SSF102405 134 338 5.19E-37 T 25-04-2016 SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 Pfam PF14793 Domain of unknown function (DUF4478) 17 123 3.4E-39 T 25-04-2016 IPR027820 Domain of unknown function DUF4478 SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 PANTHER PTHR31223:SF12 96 393 4.2E-159 T 25-04-2016 SMD_RS07565 eb2990a2c0f42927983164cd98615afb 462 Pfam PF11892 Domain of unknown function (DUF3412) 342 460 1.9E-52 T 25-04-2016 IPR021826 Protein of unknown function DUF3412 SMD_RS01560 8521a0ac7858490761fbdd8b42fb7911 287 SUPERFAMILY SSF53098 95 256 8.47E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS01560 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552 7 261 1.9E-111 T 25-04-2016 SMD_RS01560 8521a0ac7858490761fbdd8b42fb7911 287 Gene3D G3DSA:3.30.420.10 97 252 1.3E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS01560 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13276 HTH-like domain 43 86 6.0E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS01560 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13683 Integrase core domain 185 251 1.8E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS01560 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552:SF35 7 261 1.9E-111 T 25-04-2016 SMD_RS00850 8521a0ac7858490761fbdd8b42fb7911 287 SUPERFAMILY SSF53098 95 256 8.47E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS00850 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552 7 261 1.9E-111 T 25-04-2016 SMD_RS00850 8521a0ac7858490761fbdd8b42fb7911 287 Gene3D G3DSA:3.30.420.10 97 252 1.3E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS00850 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13276 HTH-like domain 43 86 6.0E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS00850 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13683 Integrase core domain 185 251 1.8E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS00850 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552:SF35 7 261 1.9E-111 T 25-04-2016 SMD_RS09410 8521a0ac7858490761fbdd8b42fb7911 287 SUPERFAMILY SSF53098 95 256 8.47E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS09410 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552 7 261 1.9E-111 T 25-04-2016 SMD_RS09410 8521a0ac7858490761fbdd8b42fb7911 287 Gene3D G3DSA:3.30.420.10 97 252 1.3E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS09410 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13276 HTH-like domain 43 86 6.0E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS09410 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13683 Integrase core domain 185 251 1.8E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS09410 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552:SF35 7 261 1.9E-111 T 25-04-2016 SMD_RS19545 8521a0ac7858490761fbdd8b42fb7911 287 SUPERFAMILY SSF53098 95 256 8.47E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS19545 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552 7 261 1.9E-111 T 25-04-2016 SMD_RS19545 8521a0ac7858490761fbdd8b42fb7911 287 Gene3D G3DSA:3.30.420.10 97 252 1.3E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS19545 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13276 HTH-like domain 43 86 6.0E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS19545 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13683 Integrase core domain 185 251 1.8E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS19545 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552:SF35 7 261 1.9E-111 T 25-04-2016 SMD_RS07735 8521a0ac7858490761fbdd8b42fb7911 287 SUPERFAMILY SSF53098 95 256 8.47E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS07735 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552 7 261 1.9E-111 T 25-04-2016 SMD_RS07735 8521a0ac7858490761fbdd8b42fb7911 287 Gene3D G3DSA:3.30.420.10 97 252 1.3E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS07735 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13276 HTH-like domain 43 86 6.0E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS07735 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13683 Integrase core domain 185 251 1.8E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS07735 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552:SF35 7 261 1.9E-111 T 25-04-2016 SMD_RS17480 8521a0ac7858490761fbdd8b42fb7911 287 SUPERFAMILY SSF53098 95 256 8.47E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS17480 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552 7 261 1.9E-111 T 25-04-2016 SMD_RS17480 8521a0ac7858490761fbdd8b42fb7911 287 Gene3D G3DSA:3.30.420.10 97 252 1.3E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS17480 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13276 HTH-like domain 43 86 6.0E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS17480 8521a0ac7858490761fbdd8b42fb7911 287 Pfam PF13683 Integrase core domain 185 251 1.8E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS17480 8521a0ac7858490761fbdd8b42fb7911 287 PANTHER PTHR32552:SF35 7 261 1.9E-111 T 25-04-2016 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 Gene3D G3DSA:1.10.10.10 1 85 1.1E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 SUPERFAMILY SSF53850 88 291 1.55E-29 T 25-04-2016 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 PANTHER PTHR30346 1 310 8.6E-80 T 25-04-2016 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 Pfam PF03466 LysR substrate binding domain 87 290 2.5E-33 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 SUPERFAMILY SSF46785 1 85 2.39E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-22 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 Gene3D G3DSA:3.40.190.10 175 262 1.1E-14 T 25-04-2016 SMD_RS04860 3b832091d32f5aaa02fb9eee64dc4219 314 Gene3D G3DSA:3.40.190.10 90 174 2.5E-20 T 25-04-2016 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PIRSF PIRSF000774 1 459 9.9E-117 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PANTHER PTHR32248:SF4 1 459 1.9E-111 T 25-04-2016 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PRINTS PR00045 Sigma-54 factor signature 173 190 1.5E-25 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PRINTS PR00045 Sigma-54 factor signature 377 388 1.5E-25 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PRINTS PR00045 Sigma-54 factor signature 432 450 1.5E-25 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PRINTS PR00045 Sigma-54 factor signature 361 373 1.5E-25 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 Gene3D G3DSA:1.10.8.320 347 375 3.4E-4 T 25-04-2016 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 PANTHER PTHR32248 1 459 1.9E-111 T 25-04-2016 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 1.4E-13 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 437 444 - T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 Pfam PF04963 Sigma-54 factor, core binding domain 114 290 1.8E-33 T 25-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 Pfam PF04552 Sigma-54, DNA binding domain 304 457 3.0E-56 T 25-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SMD_RS10870 cc2c6df7334bb9f025cd033d7edf3847 469 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 1.6E-111 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 PANTHER PTHR21012 2 126 1.0E-63 T 25-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 PIRSF PIRSF006246 1 125 1.7E-48 T 25-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 SUPERFAMILY SSF50692 1 121 5.09E-47 T 25-04-2016 IPR009010 Aspartate decarboxylase-like domain SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 8.0E-53 T 25-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 Pfam PF02261 Aspartate decarboxylase 1 114 8.7E-49 T 25-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 PANTHER PTHR21012:SF0 2 126 1.0E-63 T 25-04-2016 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 68.861 T 25-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 Gene3D G3DSA:2.40.40.20 1 124 3.5E-53 T 25-04-2016 SMD_RS09080 0735fb991329cfd7db41ecd56edf5e8d 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 7.6E-51 T 25-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 SUPERFAMILY SSF46689 181 229 1.3E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 SMART SM00342 144 227 3.4E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 Gene3D G3DSA:1.10.10.60 127 182 1.8E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 PANTHER PTHR11019:SF39 2 228 5.5E-36 T 25-04-2016 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 Gene3D G3DSA:1.10.10.60 183 229 3.9E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 Pfam PF12833 Helix-turn-helix domain 150 228 6.5E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 PANTHER PTHR11019 2 228 5.5E-36 T 25-04-2016 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 SUPERFAMILY SSF46689 129 177 6.27E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10215 b35c9c97de236d0ad90e595f6c8abc32 231 Gene3D G3DSA:2.60.120.10 11 72 4.0E-4 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 PANTHER PTHR30055:SF54 1 169 3.3E-31 T 25-04-2016 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 Gene3D G3DSA:1.10.357.10 60 186 2.9E-12 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 PANTHER PTHR30055 1 169 3.3E-31 T 25-04-2016 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 SUPERFAMILY SSF46689 5 76 2.74E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.2E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.2E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 Gene3D G3DSA:1.10.10.60 3 59 6.9E-21 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13870 d4abee2feea4ffb0cb5d9e0090d891b2 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 1.4E-16 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 45.125 T 25-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 Gene3D G3DSA:3.30.540.10 4 194 1.8E-70 T 25-04-2016 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 Gene3D G3DSA:3.40.190.80 195 331 8.2E-56 T 25-04-2016 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 1.7E-58 T 25-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PANTHER PTHR11556 6 337 7.3E-155 T 25-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PIRSF PIRSF000904 1 336 6.3E-122 T 25-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PIRSF PIRSF500210 1 335 3.1E-123 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.7E-66 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.7E-66 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.7E-66 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.7E-66 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.7E-66 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.7E-66 T 25-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS00210 6b01e34f8cda0ead35978a63d7fc2173 338 SUPERFAMILY SSF56655 3 330 1.53E-110 T 25-04-2016 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 PANTHER PTHR11019:SF110 22 288 1.4E-128 T 25-04-2016 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 Gene3D G3DSA:1.10.10.60 235 278 6.2E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 PANTHER PTHR11019 22 288 1.4E-128 T 25-04-2016 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 19 168 9.8E-43 T 25-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 SUPERFAMILY SSF46689 234 284 1.9E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 Gene3D G3DSA:1.10.10.60 183 234 7.0E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 Pfam PF12833 Helix-turn-helix domain 203 278 1.3E-19 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 SMART SM00342 197 280 2.5E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS09955 80a5ce9a90551daf95c5fe7cd1374d23 302 SUPERFAMILY SSF46689 183 231 1.58E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 SUPERFAMILY SSF53671 11 316 2.1E-88 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 Gene3D G3DSA:3.40.50.1370 11 154 4.6E-43 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 158 1.3E-34 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 Gene3D G3DSA:3.40.50.1370 155 294 8.9E-46 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 315 1.2E-83 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.1E-22 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 146 157 3.1E-22 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 60 79 3.1E-22 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 303 3.1E-22 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PANTHER PTHR11405 1 316 2.1E-121 T 25-04-2016 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 316 38.945 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00101 Aspartate carbamoyltransferase signature 50 72 7.0E-32 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00101 Aspartate carbamoyltransferase signature 272 277 7.0E-32 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00101 Aspartate carbamoyltransferase signature 231 240 7.0E-32 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00101 Aspartate carbamoyltransferase signature 296 310 7.0E-32 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00101 Aspartate carbamoyltransferase signature 88 97 7.0E-32 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PRINTS PR00101 Aspartate carbamoyltransferase signature 145 162 7.0E-32 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 PANTHER PTHR11405:SF16 1 316 2.1E-121 T 25-04-2016 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 60 67 - T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS05385 52ad3768e55a4f7db1d344bd55f6ca7f 316 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 167 313 5.3E-23 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 Pfam PF00108 Thiolase, N-terminal domain 7 277 7.9E-53 T 25-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 425 5.1E-114 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 PANTHER PTHR18919 2 426 2.5E-181 T 25-04-2016 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 Gene3D G3DSA:3.40.47.10 167 213 1.7E-45 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 Gene3D G3DSA:3.40.47.10 293 425 1.7E-45 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 PIRSF PIRSF000429 1 426 3.9E-102 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 SUPERFAMILY SSF53901 7 283 2.11E-56 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 PANTHER PTHR18919:SF5 2 426 2.5E-181 T 25-04-2016 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 Pfam PF02803 Thiolase, C-terminal domain 286 426 1.4E-31 T 25-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 Gene3D G3DSA:3.40.47.10 7 126 3.0E-46 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 Gene3D G3DSA:3.40.47.10 214 289 3.0E-46 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS00745 3b0cd989c559e46481baf5711050bf4b 426 SUPERFAMILY SSF53901 283 426 2.04E-30 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 SMART SM00100 43 158 7.1E-11 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 Pfam PF00027 Cyclic nucleotide-binding domain 62 135 3.1E-13 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 Gene3D G3DSA:2.60.120.10 51 181 1.0E-20 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 Pfam PF13545 Crp-like helix-turn-helix domain 175 249 9.2E-19 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 PANTHER PTHR24567:SF28 62 250 4.1E-48 T 25-04-2016 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 SUPERFAMILY SSF51206 59 162 3.4E-21 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 PANTHER PTHR24567 62 250 4.1E-48 T 25-04-2016 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 SMART SM00419 194 242 3.1E-11 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 Gene3D G3DSA:1.10.10.10 182 250 3.2E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 216 231 1.4E-7 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 200 216 1.4E-7 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS12735 b0d3e46abfd43403af60cc9ad48552bf 258 SUPERFAMILY SSF46785 174 251 2.5E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17690 ef07c123bc4ec6da2322173fdb3f490e 272 Gene3D G3DSA:1.10.575.10 27 270 5.1E-69 T 25-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 SMD_RS17690 ef07c123bc4ec6da2322173fdb3f490e 272 SUPERFAMILY SSF48537 27 267 3.01E-58 T 25-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 SMD_RS17690 ef07c123bc4ec6da2322173fdb3f490e 272 Pfam PF02265 S1/P1 Nuclease 27 269 2.2E-66 T 25-04-2016 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 SMD_RS17690 ef07c123bc4ec6da2322173fdb3f490e 272 PANTHER PTHR33146 4 269 9.4E-58 T 25-04-2016 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.8E-15 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 PANTHER PTHR11252:SF0 2 695 0.0 T 25-04-2016 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF54211 4 143 3.44E-48 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.5E-19 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 5.2E-23 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SMART SM00322 553 618 1.0E-12 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 PIRSF PIRSF005499 1 702 3.0E-294 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF00013 KH domain 558 615 1.1E-10 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF54211 298 489 9.62E-48 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 PANTHER PTHR11252 2 695 0.0 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF55666 451 550 1.28E-27 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Gene3D G3DSA:3.30.230.70 317 539 1.1E-87 T 25-04-2016 IPR027408 PNPase/RNase PH domain SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Gene3D G3DSA:3.30.230.70 3 222 1.0E-79 T 25-04-2016 IPR027408 PNPase/RNase PH domain SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SMART SM00316 621 691 4.3E-27 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF55666 144 233 9.12E-27 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.465 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF00575 S1 RNA binding domain 620 691 3.5E-21 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF46915 238 321 2.56E-16 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 1.5E-6 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 4.3E-12 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Gene3D G3DSA:3.30.1370.10 552 618 4.8E-26 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF50249 609 695 2.74E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Gene3D G3DSA:1.10.10.400 226 316 6.5E-20 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 Gene3D G3DSA:2.40.50.140 619 695 1.6E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15370 a9df8a365c1ebf83cc0f0820c1d19382 702 SUPERFAMILY SSF54791 553 630 1.26E-17 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 1.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 351 1.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 1.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 SMART SM00387 287 396 6.0E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 SUPERFAMILY SSF55874 253 394 6.16E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 Pfam PF01590 GAF domain 20 152 6.9E-7 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 SMART SM00388 177 242 5.3E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 394 3.3E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 PANTHER PTHR24423 158 398 4.5E-43 T 25-04-2016 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 239 3.0E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 Gene3D G3DSA:3.30.565.10 252 395 2.3E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 SMART SM00065 17 165 3.9E-6 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 SUPERFAMILY SSF55781 21 157 3.19E-17 T 25-04-2016 IPR029016 GAF domain-like SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 PANTHER PTHR24423:SF540 158 398 4.5E-43 T 25-04-2016 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 Gene3D G3DSA:3.30.450.40 21 157 3.2E-13 T 25-04-2016 IPR029016 GAF domain-like SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 Gene3D G3DSA:1.10.287.130 171 238 2.7E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11530 74dd0ea4e0d987bc56b7eae1e2497bfd 398 SUPERFAMILY SSF47384 165 239 4.12E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 365 7.2E-8 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 Gene3D G3DSA:3.40.50.2300 75 207 6.2E-35 T 25-04-2016 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 PANTHER PTHR26402:SF50 84 222 1.5E-37 T 25-04-2016 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 PANTHER PTHR26402:SF50 602 621 1.5E-37 T 25-04-2016 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 Pfam PF00072 Response regulator receiver domain 86 197 8.7E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 Gene3D G3DSA:3.30.70.270 223 365 7.3E-15 T 25-04-2016 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 PANTHER PTHR26402 84 222 1.5E-37 T 25-04-2016 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 PANTHER PTHR26402 602 621 1.5E-37 T 25-04-2016 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 SMART SM00052 377 621 1.4E-10 T 25-04-2016 IPR001633 EAL domain SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 SMART SM00448 84 197 4.3E-33 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 SUPERFAMILY SSF55073 225 366 1.57E-12 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 SUPERFAMILY SSF141868 388 613 2.75E-35 T 25-04-2016 IPR001633 EAL domain SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 SMART SM00267 201 375 3.2E-5 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 Pfam PF00563 EAL domain 388 613 2.7E-36 T 25-04-2016 IPR001633 EAL domain SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 SUPERFAMILY SSF52172 82 208 9.82E-36 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS20185 18e0d00b3021b8800f2eae667dddac76 629 Gene3D G3DSA:3.20.20.450 387 614 1.3E-35 T 25-04-2016 IPR001633 EAL domain SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 PANTHER PTHR21499 6 239 6.9E-112 T 25-04-2016 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 PANTHER PTHR21499:SF23 6 239 6.9E-112 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 Pfam PF00696 Amino acid kinase family 8 216 1.1E-31 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 SUPERFAMILY SSF53633 4 236 3.01E-74 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 Gene3D G3DSA:3.40.1160.10 3 237 2.7E-86 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.179 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 PIRSF PIRSF005650 1 241 1.3E-93 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMD_RS07005 cc41a1111d48cf3691050ad20a44c62c 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 6.2E-98 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMD_RS08700 7b7c89799b1c4f0212295fdd82c27e95 165 SUPERFAMILY SSF50475 8 137 2.06E-35 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS08700 7b7c89799b1c4f0212295fdd82c27e95 165 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 152 2.3E-49 T 25-04-2016 SMD_RS08700 7b7c89799b1c4f0212295fdd82c27e95 165 Gene3D G3DSA:2.30.110.10 6 163 7.1E-54 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS08700 7b7c89799b1c4f0212295fdd82c27e95 165 PANTHER PTHR34818 4 163 8.4E-48 T 25-04-2016 SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Gene3D G3DSA:2.120.10.30 287 374 2.5E-6 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF00990 Diguanylate cyclase, GGDEF domain 849 1004 1.2E-38 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 PANTHER PTHR10799 873 1004 6.5E-24 T 25-04-2016 SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 844 1006 4.9E-42 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 SUPERFAMILY SSF55073 852 1005 7.77E-44 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Gene3D G3DSA:2.120.10.30 375 476 7.9E-10 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Gene3D G3DSA:2.120.10.30 109 215 9.1E-7 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF07495 Y_Y_Y domain 702 764 2.4E-14 T 25-04-2016 IPR011123 Two component regulator three Y SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 SUPERFAMILY SSF63829 444 665 1.21E-8 T 25-04-2016 SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF07494 Two component regulator propeller 399 420 0.0066 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF07494 Two component regulator propeller 59 81 0.0095 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF07494 Two component regulator propeller 482 503 0.0067 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF07494 Two component regulator propeller 441 463 0.011 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Pfam PF07494 Two component regulator propeller 273 294 0.0049 T 25-04-2016 IPR011110 Two component regulator propeller SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 SUPERFAMILY SSF63829 288 502 6.93E-20 T 25-04-2016 SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 SMART SM00267 836 1008 1.4E-49 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 SUPERFAMILY SSF63829 60 223 1.63E-10 T 25-04-2016 SMD_RS07200 a4bd9331b154b7cb58477da2c2b4113b 1008 Gene3D G3DSA:3.30.70.270 849 1006 7.0E-48 T 25-04-2016 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 PANTHER PTHR21000 1 369 0.0 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 PANTHER PTHR21000 404 612 0.0 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.314 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 SUPERFAMILY SSF52016 419 607 3.69E-61 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 SUPERFAMILY SSF143975 4 418 2.09E-130 T 25-04-2016 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 PANTHER PTHR21000:SF11 1 369 0.0 T 25-04-2016 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 PANTHER PTHR21000:SF11 404 612 0.0 T 25-04-2016 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 3.8E-244 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS20975 920d61a84b098358d11da6bdc0ff818a 612 Pfam PF00920 Dehydratase family 34 603 2.1E-215 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS11715 7f95f83cbd81f19559873d6728a45ac7 281 PANTHER PTHR10091:SF5 66 172 7.1E-20 T 25-04-2016 SMD_RS11715 7f95f83cbd81f19559873d6728a45ac7 281 Pfam PF01263 Aldose 1-epimerase 35 174 2.4E-18 T 25-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SMD_RS11715 7f95f83cbd81f19559873d6728a45ac7 281 PANTHER PTHR10091 66 172 7.1E-20 T 25-04-2016 SMD_RS11715 7f95f83cbd81f19559873d6728a45ac7 281 SUPERFAMILY SSF74650 20 275 4.21E-37 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMD_RS11715 7f95f83cbd81f19559873d6728a45ac7 281 Gene3D G3DSA:2.70.98.10 69 172 6.0E-13 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMD_RS15960 be5d1251f17752d06fc52ad502364ceb 227 Pfam PF04367 Protein of unknown function (DUF502) 81 181 1.6E-26 T 25-04-2016 IPR007462 Protein of unknown function DUF502 SMD_RS15960 be5d1251f17752d06fc52ad502364ceb 227 PANTHER PTHR31876 4 221 4.2E-57 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 SUPERFAMILY SSF52283 12 154 1.47E-113 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 SUPERFAMILY SSF52283 402 481 1.47E-113 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 SUPERFAMILY SSF52283 191 238 1.47E-113 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Gene3D G3DSA:3.40.50.720 278 358 1.0E-12 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 PANTHER PTHR23420 185 481 0.0 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 PANTHER PTHR23420 13 152 0.0 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 239 401 2.7E-81 T 25-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 14 473 2.5E-186 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Gene3D G3DSA:3.40.50.1480 402 481 2.9E-37 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 SMART SM00997 239 401 1.1E-107 T 25-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 480 4.4E-147 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 9 473 48.221 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 SUPERFAMILY SSF51735 239 401 7.09E-81 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 SMART SM00996 13 480 0.0 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 - T 25-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 PIRSF PIRSF001109 1 481 9.7E-190 T 25-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Gene3D G3DSA:3.40.50.1480 190 277 6.2E-119 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 Gene3D G3DSA:3.40.50.1480 12 153 6.2E-119 T 25-04-2016 SMD_RS03570 c00a9dbe52ae2c49d010adb421562fcd 481 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 261 278 - T 25-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SMD_RS03080 ba338244f9ce60ade0c21fa1abd00ff2 273 SUPERFAMILY SSF103481 39 133 3.92E-12 T 25-04-2016 SMD_RS03080 ba338244f9ce60ade0c21fa1abd00ff2 273 PANTHER PTHR22911 1 272 1.0E-82 T 25-04-2016 SMD_RS03080 ba338244f9ce60ade0c21fa1abd00ff2 273 PANTHER PTHR22911:SF61 1 272 1.0E-82 T 25-04-2016 SMD_RS03080 ba338244f9ce60ade0c21fa1abd00ff2 273 SUPERFAMILY SSF103481 171 272 7.32E-14 T 25-04-2016 SMD_RS03080 ba338244f9ce60ade0c21fa1abd00ff2 273 Pfam PF00892 EamA-like transporter family 142 270 6.4E-14 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 1.9E-64 T 25-04-2016 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 8.7E-5 T 25-04-2016 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PANTHER PTHR24322:SF635 12 138 2.0E-69 T 25-04-2016 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PANTHER PTHR24322:SF635 154 186 2.0E-69 T 25-04-2016 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-48 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-48 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-48 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-48 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-48 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.6E-48 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 Gene3D G3DSA:3.40.50.720 2 246 3.8E-86 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PANTHER PTHR24322 12 138 2.0E-69 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PANTHER PTHR24322 154 186 2.0E-69 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 9.0E-100 T 25-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-15 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.0E-15 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.0E-15 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05165 97a3f531dd61f38fae70a90ada959de1 247 SUPERFAMILY SSF51735 6 246 1.09E-82 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 PANTHER PTHR11772 2 405 1.5E-236 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 PANTHER PTHR11772 482 646 1.5E-236 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 Pfam PF13537 Glutamine amidotransferase domain 52 171 7.7E-48 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 PIRSF PIRSF001589 1 643 4.0E-158 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 Gene3D G3DSA:3.40.50.620 486 634 2.2E-87 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 Gene3D G3DSA:3.40.50.620 237 425 2.2E-87 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 PANTHER PTHR11772:SF10 2 405 1.5E-236 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 PANTHER PTHR11772:SF10 482 646 1.5E-236 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 SUPERFAMILY SSF52402 490 630 1.68E-85 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 SUPERFAMILY SSF52402 253 403 1.68E-85 T 25-04-2016 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 570 4.1E-140 T 25-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 Pfam PF00733 Asparagine synthase 263 634 2.2E-107 T 25-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 Gene3D G3DSA:3.60.20.10 1 220 2.1E-69 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS14510 03eb6cf014bd6f56c35411f993695cf9 647 SUPERFAMILY SSF56235 1 219 4.03E-63 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS22055 ce3337a225c4754927095fc0e89cc058 129 SMART SM00248 68 97 200.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS22055 ce3337a225c4754927095fc0e89cc058 129 SMART SM00248 35 64 1.3 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS22055 ce3337a225c4754927095fc0e89cc058 129 Gene3D G3DSA:1.25.40.20 32 121 3.6E-13 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS22055 ce3337a225c4754927095fc0e89cc058 129 SUPERFAMILY SSF48403 33 119 3.51E-14 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.314 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 Gene3D G3DSA:3.60.150.10 9 352 4.1E-147 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 8.6E-133 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 PIRSF PIRSF001456 3 361 6.8E-132 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 Pfam PF01264 Chorismate synthase 10 345 7.8E-131 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 SUPERFAMILY SSF103263 4 351 6.28E-140 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS15605 aec6d4e2680c0f3867be68ae865a6ff0 367 PANTHER PTHR21085 2 352 1.4E-196 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PANTHER PTHR23500 195 372 1.6E-117 T 25-04-2016 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PANTHER PTHR23500 9 171 1.6E-117 T 25-04-2016 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PANTHER PTHR23500 478 592 1.6E-117 T 25-04-2016 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PRINTS PR00171 Sugar transporter signature 491 512 6.1E-15 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PRINTS PR00171 Sugar transporter signature 109 128 6.1E-15 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PRINTS PR00171 Sugar transporter signature 22 32 6.1E-15 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 PRINTS PR00171 Sugar transporter signature 514 526 6.1E-15 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 SUPERFAMILY SSF103473 6 360 1.05E-51 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 Pfam PF00083 Sugar (and other) transporter 487 590 6.6E-22 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 Pfam PF00083 Sugar (and other) transporter 19 364 9.3E-66 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 SUPERFAMILY SSF103473 484 587 2.35E-14 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 Gene3D G3DSA:1.20.1250.20 485 587 7.1E-23 T 25-04-2016 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 Gene3D G3DSA:1.20.1250.20 275 364 7.1E-23 T 25-04-2016 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 Gene3D G3DSA:1.20.1250.20 20 225 1.4E-25 T 25-04-2016 SMD_RS20815 bba2f9558ef1f16a88440f782e75c616 592 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PANTHER PTHR23115 1 182 1.2E-239 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PANTHER PTHR23115 249 470 1.2E-239 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 Gene3D G3DSA:3.40.50.300 6 280 8.8E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 Gene3D G3DSA:3.30.70.870 393 462 2.9E-12 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 Gene3D G3DSA:2.40.30.10 290 392 3.1E-23 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 1.3E-46 T 25-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 SUPERFAMILY SSF54980 391 466 1.22E-16 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PANTHER PTHR23115:SF69 1 182 1.2E-239 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 PANTHER PTHR23115:SF69 249 470 1.2E-239 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 52.747 T 25-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 2.0E-48 T 25-04-2016 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 151 2.1E-20 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 SUPERFAMILY SSF52540 8 275 3.36E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 SUPERFAMILY SSF50447 259 391 2.12E-30 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS16610 1e593cf19d7993c4477a1df0050e3f55 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 526 1.5E-251 T 25-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-17 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-17 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-17 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-17 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-17 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PANTHER PTHR11404:SF8 1 192 5.5E-87 T 25-04-2016 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PIRSF PIRSF000349 1 192 9.3E-74 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.4E-36 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 PANTHER PTHR11404 1 192 5.5E-87 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 Gene3D G3DSA:1.10.287.990 20 81 3.3E-19 T 25-04-2016 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 25-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 81 1.0E-23 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 SUPERFAMILY SSF46609 1 83 9.56E-28 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07545 ce8b9e61481751c4ef1d5f7d69cae62e 192 SUPERFAMILY SSF54719 82 191 7.59E-42 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 PANTHER PTHR23501 13 518 2.1E-271 T 25-04-2016 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 Gene3D G3DSA:1.20.1250.20 490 514 4.6E-20 T 25-04-2016 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 Gene3D G3DSA:1.20.1250.20 278 440 4.6E-20 T 25-04-2016 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 Pfam PF07690 Major Facilitator Superfamily 36 430 1.3E-55 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 PANTHER PTHR23501:SF52 13 518 2.1E-271 T 25-04-2016 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 32 510 8.7E-155 T 25-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 Gene3D G3DSA:1.20.1250.20 34 216 1.5E-37 T 25-04-2016 SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 SUPERFAMILY SSF103473 489 514 5.49E-68 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 SUPERFAMILY SSF103473 31 216 5.49E-68 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS07135 152ac99b6ab8e11afb7b8fd134a16b33 528 SUPERFAMILY SSF103473 268 439 5.49E-68 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 SUPERFAMILY SSF53067 1 184 2.59E-66 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 5.8E-283 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.227 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PANTHER PTHR19375:SF173 2 638 0.0 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 SUPERFAMILY SSF53067 189 384 2.47E-67 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 471 487 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 367 387 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 200 210 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 139 159 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 336 352 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PRINTS PR00301 70kDa heat shock protein signature 390 409 1.1E-80 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:3.30.420.40 4 52 2.5E-65 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:3.30.420.40 120 198 2.5E-65 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 339 353 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 PANTHER PTHR19375 2 638 0.0 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Pfam PF00012 Hsp70 protein 4 603 2.2E-259 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:3.30.30.30 53 106 2.7E-26 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:2.60.34.10 392 533 9.0E-68 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:1.20.1270.10 534 603 7.5E-24 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 SUPERFAMILY SSF100920 386 542 1.12E-58 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:3.90.640.10 232 317 5.8E-31 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:3.30.420.40 321 363 1.0E-33 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 Gene3D G3DSA:3.30.420.40 199 231 1.0E-33 T 25-04-2016 SMD_RS09485 61bf5847b138d933fd4748dd0fe6bc6e 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 194 207 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 Gene3D G3DSA:3.30.950.10 114 227 2.9E-41 T 25-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 SUPERFAMILY SSF53790 4 224 4.58E-78 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 226 37.354 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 270 2.2E-82 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 PANTHER PTHR21091 4 231 3.6E-84 T 25-04-2016 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 PIRSF PIRSF005917 1 272 3.6E-98 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 PANTHER PTHR21091:SF18 4 231 3.6E-84 T 25-04-2016 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 25-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 Gene3D G3DSA:3.40.1010.10 5 113 8.1E-13 T 25-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SMD_RS03400 0c8ed1849e91b79142701b99c6ab7ca9 272 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 203 3.5E-29 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMD_RS17510 81826b4076b79d895dfccf92af459109 292 PANTHER PTHR21621:SF0 1 291 4.7E-110 T 25-04-2016 SMD_RS17510 81826b4076b79d895dfccf92af459109 292 SUPERFAMILY SSF56059 98 289 6.4E-45 T 25-04-2016 SMD_RS17510 81826b4076b79d895dfccf92af459109 292 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 3.7E-76 T 25-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 SMD_RS17510 81826b4076b79d895dfccf92af459109 292 Pfam PF08443 RimK-like ATP-grasp domain 98 285 1.5E-56 T 25-04-2016 IPR013651 ATP-grasp fold, RimK-type SMD_RS17510 81826b4076b79d895dfccf92af459109 292 Gene3D G3DSA:3.40.50.20 9 113 2.2E-19 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS17510 81826b4076b79d895dfccf92af459109 292 PANTHER PTHR21621 1 291 4.7E-110 T 25-04-2016 SMD_RS17510 81826b4076b79d895dfccf92af459109 292 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 292 49.746 T 25-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK SMD_RS17510 81826b4076b79d895dfccf92af459109 292 Gene3D G3DSA:3.30.470.20 168 277 2.8E-34 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Pfam PF13899 Thioredoxin-like 689 768 4.6E-15 T 25-04-2016 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Gene3D G3DSA:2.60.40.1250 22 145 8.5E-41 T 25-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Gene3D G3DSA:2.60.40.1250 184 307 3.9E-35 T 25-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 SUPERFAMILY SSF74863 189 305 7.06E-31 T 25-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 PANTHER PTHR32234:SF3 4 293 3.2E-198 T 25-04-2016 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 402 579 6.1E-8 T 25-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 ProSitePatterns PS00194 Thioredoxin family active site. 701 719 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 SUPERFAMILY SSF74863 26 141 5.62E-34 T 25-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Gene3D G3DSA:3.40.30.10 686 768 1.4E-12 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 PANTHER PTHR32234 351 791 3.2E-198 T 25-04-2016 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 PANTHER PTHR32234 4 293 3.2E-198 T 25-04-2016 SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Pfam PF11412 Disulphide bond corrector protein DsbC 189 304 6.5E-32 T 25-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 Pfam PF11412 Disulphide bond corrector protein DsbC 27 141 2.8E-34 T 25-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 SUPERFAMILY SSF52833 684 783 3.03E-11 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19835 5e8166629ce865bd4ebd3ecf266863ec 793 PANTHER PTHR32234:SF3 351 791 3.2E-198 T 25-04-2016 SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 Gene3D G3DSA:3.20.20.450 265 512 1.1E-78 T 25-04-2016 IPR001633 EAL domain SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 PANTHER PTHR33121:SF16 202 536 1.9E-105 T 25-04-2016 SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 SMART SM00052 261 505 1.7E-91 T 25-04-2016 IPR001633 EAL domain SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 PANTHER PTHR33121 202 536 1.9E-105 T 25-04-2016 SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 Pfam PF00563 EAL domain 268 500 9.6E-62 T 25-04-2016 IPR001633 EAL domain SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 Pfam PF12792 CSS motif domain associated with EAL 37 237 5.5E-36 T 25-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain SMD_RS02465 9da5dc23c163d59306101c07916d8485 538 SUPERFAMILY SSF141868 267 513 1.2E-74 T 25-04-2016 IPR001633 EAL domain SMD_RS10050 0c26852598269958311168bc65d6f3f0 648 PANTHER PTHR33121:SF13 351 645 1.4E-31 T 25-04-2016 SMD_RS10050 0c26852598269958311168bc65d6f3f0 648 SMART SM00052 393 641 8.6E-44 T 25-04-2016 IPR001633 EAL domain SMD_RS10050 0c26852598269958311168bc65d6f3f0 648 Gene3D G3DSA:3.20.20.450 402 646 9.3E-62 T 25-04-2016 IPR001633 EAL domain SMD_RS10050 0c26852598269958311168bc65d6f3f0 648 SUPERFAMILY SSF141868 404 646 4.58E-58 T 25-04-2016 IPR001633 EAL domain SMD_RS10050 0c26852598269958311168bc65d6f3f0 648 Pfam PF00563 EAL domain 405 635 9.5E-46 T 25-04-2016 IPR001633 EAL domain SMD_RS10050 0c26852598269958311168bc65d6f3f0 648 PANTHER PTHR33121 351 645 1.4E-31 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PANTHER PTHR24423 916 1037 2.7E-137 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PANTHER PTHR24423 362 629 2.7E-137 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PANTHER PTHR24423 287 305 2.7E-137 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PANTHER PTHR24423 5 11 2.7E-137 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SUPERFAMILY SSF52172 915 1035 1.57E-37 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SUPERFAMILY SSF55781 103 265 4.36E-17 T 25-04-2016 IPR029016 GAF domain-like SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Gene3D G3DSA:3.30.450.40 108 269 3.8E-14 T 25-04-2016 IPR029016 GAF domain-like SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Gene3D G3DSA:3.30.565.10 433 594 9.4E-49 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 2.1E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 2.1E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 2.1E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 2.1E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Pfam PF00072 Response regulator receiver domain 919 1028 6.1E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Pfam PF00072 Response regulator receiver domain 774 875 1.5E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Pfam PF00072 Response regulator receiver domain 651 760 1.3E-15 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SMART SM00388 364 432 4.7E-21 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Gene3D G3DSA:1.10.287.130 357 428 1.0E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SUPERFAMILY SSF52172 650 764 5.12E-25 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 590 9.3E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SUPERFAMILY SSF47384 351 433 5.89E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Gene3D G3DSA:3.40.50.2300 650 766 4.4E-24 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Gene3D G3DSA:3.40.50.2300 916 1036 2.1E-40 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SMART SM00065 133 275 1.2E-7 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Gene3D G3DSA:3.40.50.2300 771 891 3.7E-17 T 25-04-2016 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SUPERFAMILY SSF55874 421 590 2.23E-47 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Pfam PF13185 GAF domain 134 265 2.6E-9 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SMART SM00448 917 1030 2.2E-34 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SMART SM00448 649 759 6.5E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SMART SM00448 771 885 4.4E-10 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 432 2.0E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SUPERFAMILY SSF52172 772 893 1.99E-17 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10165 84036809fcb5c58dd180ba897cc6492f 1037 SMART SM00387 479 591 3.1E-41 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04870 282a59ea7c2c87fb361ead6c995c8f83 666 PANTHER PTHR37937 9 570 9.9E-106 T 25-04-2016 SMD_RS04870 282a59ea7c2c87fb361ead6c995c8f83 666 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 559 1.4E-103 T 25-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SMD_RS04870 282a59ea7c2c87fb361ead6c995c8f83 666 PANTHER PTHR37937:SF1 9 570 9.9E-106 T 25-04-2016 SMD_RS04870 282a59ea7c2c87fb361ead6c995c8f83 666 SUPERFAMILY SSF52540 106 554 1.54E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04870 282a59ea7c2c87fb361ead6c995c8f83 666 Gene3D G3DSA:3.40.50.300 347 552 2.4E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04870 282a59ea7c2c87fb361ead6c995c8f83 666 Gene3D G3DSA:3.40.50.300 105 209 2.4E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 SUPERFAMILY SSF51735 1 170 3.21E-12 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 156 4.8E-38 T 25-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 306 3.3E-21 T 25-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 PANTHER PTHR21708 1 310 1.0E-130 T 25-04-2016 SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 PANTHER PTHR21708:SF26 1 310 1.0E-130 T 25-04-2016 SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 Gene3D G3DSA:3.40.50.720 1 180 6.9E-52 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 SUPERFAMILY SSF48179 184 307 2.72E-23 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 308 5.4E-59 T 25-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS21120 2d2a65ed24dd403df2d1d130263951ce 312 Gene3D G3DSA:1.10.1040.10 184 307 1.6E-23 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS01545 47ed559f72c6954ae29160d6992df3bc 284 Pfam PF05036 Sporulation related domain 172 240 3.1E-6 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS01545 47ed559f72c6954ae29160d6992df3bc 284 SUPERFAMILY SSF110997 171 243 3.4E-9 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS01545 47ed559f72c6954ae29160d6992df3bc 284 Gene3D G3DSA:3.30.70.1070 127 206 1.4E-5 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS16570 4d70a5abde8d5035c37363db9fa4adca 190 Gene3D G3DSA:2.40.128.110 27 187 1.2E-30 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS16570 4d70a5abde8d5035c37363db9fa4adca 190 Pfam PF04264 YceI-like domain 49 182 1.7E-24 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS16570 4d70a5abde8d5035c37363db9fa4adca 190 SMART SM00867 28 188 1.2E-34 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS16570 4d70a5abde8d5035c37363db9fa4adca 190 PANTHER PTHR34406 8 187 4.3E-43 T 25-04-2016 SMD_RS16570 4d70a5abde8d5035c37363db9fa4adca 190 PANTHER PTHR34406:SF1 8 187 4.3E-43 T 25-04-2016 SMD_RS16570 4d70a5abde8d5035c37363db9fa4adca 190 SUPERFAMILY SSF101874 26 187 8.89E-35 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 SUPERFAMILY SSF47757 4 72 9.94E-6 T 25-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 264 2.0E-35 T 25-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 SMART SM00138 8 271 2.8E-28 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 6.2E-20 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PRINTS PR00996 Glutamate methyltransferase family signature 135 151 6.2E-20 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 6.2E-20 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 6.2E-20 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 6.2E-20 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PANTHER PTHR24422 1 273 1.5E-87 T 25-04-2016 SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 SUPERFAMILY SSF53335 75 267 6.19E-38 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 Gene3D G3DSA:3.40.50.150 74 270 5.6E-54 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 1.2E-10 T 25-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMD_RS10170 1126d841f3fbb58f00e23ef0587fa06b 274 PANTHER PTHR24422:SF8 1 273 1.5E-87 T 25-04-2016 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 8.4E-17 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 SMART SM01086 319 414 8.9E-34 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 PANTHER PTHR11262 2 416 3.5E-253 T 25-04-2016 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Gene3D G3DSA:1.10.8.60 318 416 1.5E-37 T 25-04-2016 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 53.384 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Pfam PF06689 ClpX C4-type zinc finger 16 53 7.8E-21 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Gene3D G3DSA:3.40.50.300 67 255 6.8E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Gene3D G3DSA:3.40.50.300 296 313 6.8E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 SUPERFAMILY SSF57716 16 51 9.27E-12 T 25-04-2016 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 SMART SM00382 113 266 6.5E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 SUPERFAMILY SSF52540 64 407 3.53E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 SMART SM00994 15 54 3.7E-24 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 8.3E-207 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SMD_RS04600 afce3d563f97fca3685f6bbf4b58891a 429 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 4.9E-50 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Gene3D G3DSA:1.10.601.10 8 86 1.2E-16 T 25-04-2016 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PANTHER PTHR30385:SF7 9 237 1.5E-70 T 25-04-2016 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PANTHER PTHR30385 9 237 1.5E-70 T 25-04-2016 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 SUPERFAMILY SSF88946 12 91 8.01E-25 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.5E-11 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.5E-11 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.5E-11 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.5E-11 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 235 4.6E-34 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Pfam PF04539 Sigma-70 region 3 103 170 3.6E-13 T 25-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 63.804 T 25-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Gene3D G3DSA:1.10.10.10 91 139 2.3E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 PIRSF PIRSF000770 3 242 1.0E-42 T 25-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 SUPERFAMILY SSF88659 163 236 5.61E-19 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Pfam PF04545 Sigma-70, region 4 185 233 2.5E-17 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 237 6.1E-80 T 25-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Pfam PF04542 Sigma-70 region 2 20 91 8.1E-17 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 Gene3D G3DSA:1.10.10.10 173 237 1.9E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10755 d716fb4333476c456406e41277fdb2f9 248 SUPERFAMILY SSF88659 92 158 1.18E-12 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 ProSitePatterns PS00079 Multicopper oxidases signature 1. 155 175 - T 25-04-2016 IPR033138 Multicopper oxidases, conserved site SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 ProSitePatterns PS00079 Multicopper oxidases signature 1. 579 599 - T 25-04-2016 IPR033138 Multicopper oxidases, conserved site SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 SUPERFAMILY SSF49503 454 600 7.66E-34 T 25-04-2016 IPR008972 Cupredoxin SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 Pfam PF07731 Multicopper oxidase 486 602 2.3E-26 T 25-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 PANTHER PTHR11709 452 603 1.3E-112 T 25-04-2016 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 PANTHER PTHR11709 265 378 1.3E-112 T 25-04-2016 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 PANTHER PTHR11709 20 224 1.3E-112 T 25-04-2016 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 Gene3D G3DSA:2.60.40.420 185 390 3.2E-49 T 25-04-2016 IPR008972 Cupredoxin SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 Pfam PF00394 Multicopper oxidase 190 367 5.1E-33 T 25-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 44 0.0015 T 25-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 Gene3D G3DSA:2.60.40.420 482 602 3.0E-37 T 25-04-2016 IPR008972 Cupredoxin SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 16 601 9.8E-299 T 25-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 Gene3D G3DSA:2.60.40.420 61 178 8.9E-31 T 25-04-2016 IPR008972 Cupredoxin SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 Pfam PF07732 Multicopper oxidase 71 180 6.2E-38 T 25-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 PANTHER PTHR11709:SF33 452 603 1.3E-112 T 25-04-2016 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 PANTHER PTHR11709:SF33 265 378 1.3E-112 T 25-04-2016 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 PANTHER PTHR11709:SF33 20 224 1.3E-112 T 25-04-2016 SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 SUPERFAMILY SSF49503 184 391 3.22E-56 T 25-04-2016 IPR008972 Cupredoxin SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 SUPERFAMILY SSF49503 64 211 1.89E-40 T 25-04-2016 IPR008972 Cupredoxin SMD_RS16860 f08bedb2c4dd37591b99f2921612524b 603 ProSitePatterns PS00080 Multicopper oxidases signature 2. 584 595 - T 25-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 70 105 4.0E-9 T 25-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Gene3D G3DSA:3.40.50.300 375 539 9.0E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 SUPERFAMILY SSF50447 554 636 1.35E-24 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Pfam PF11987 Translation-initiation factor 2 668 771 2.0E-33 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 SUPERFAMILY SSF52156 665 788 1.83E-32 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Gene3D G3DSA:3.30.56.50 3 52 3.5E-20 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 PANTHER PTHR23115 735 877 4.0E-199 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 PANTHER PTHR23115 360 709 4.0E-199 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Gene3D G3DSA:2.40.30.10 553 644 6.4E-21 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 ProSitePatterns PS01176 Initiation factor 2 signature. 832 854 - T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 879 16.747 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 SUPERFAMILY SSF50447 783 879 1.27E-32 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Gene3D G3DSA:3.40.50.10050 681 759 4.2E-24 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 304 354 1.6E-14 T 25-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 PANTHER PTHR23115:SF184 735 877 4.0E-199 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 PANTHER PTHR23115:SF184 360 709 4.0E-199 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 383 538 2.8E-31 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Gene3D G3DSA:2.40.30.10 783 879 2.5E-37 T 25-04-2016 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 SUPERFAMILY SSF52540 378 544 1.49E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 298 881 7.4E-246 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 SUPERFAMILY SSF46955 4 52 1.04E-8 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS15390 d86ea51f55e225828d7655f4e265b6b4 881 Pfam PF00009 Elongation factor Tu GTP binding domain 385 540 7.5E-34 T 25-04-2016 SMD_RS09345 10352e57dc72b3bfb09d3cac3c9a1dac 285 PANTHER PTHR12121:SF36 30 284 4.0E-63 T 25-04-2016 SMD_RS09345 10352e57dc72b3bfb09d3cac3c9a1dac 285 SUPERFAMILY SSF56219 30 282 2.22E-40 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS09345 10352e57dc72b3bfb09d3cac3c9a1dac 285 PANTHER PTHR12121 30 284 4.0E-63 T 25-04-2016 SMD_RS09345 10352e57dc72b3bfb09d3cac3c9a1dac 285 Gene3D G3DSA:3.60.10.10 31 281 4.5E-14 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS09345 10352e57dc72b3bfb09d3cac3c9a1dac 285 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 34 273 1.1E-18 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 SMART SM00382 38 209 0.0031 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 PANTHER PTHR24031 1 458 1.2E-219 T 25-04-2016 SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 PANTHER PTHR24031:SF180 1 458 1.2E-219 T 25-04-2016 SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 Gene3D G3DSA:3.40.50.300 215 369 7.5E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 Pfam PF00270 DEAD/DEAH box helicase 26 191 2.0E-46 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 25-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 Pfam PF00271 Helicase conserved C-terminal domain 232 336 3.0E-27 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 SMART SM00490 255 336 2.0E-29 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 SMART SM00487 21 219 1.7E-56 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 Pfam PF03880 DbpA RNA binding domain 386 456 4.3E-24 T 25-04-2016 IPR005580 DbpA, RNA-binding domain SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 SUPERFAMILY SSF52540 71 349 1.01E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09630 62cfee2c98a3fa3ad32ce4a2e6e68d78 458 Gene3D G3DSA:3.40.50.300 1 208 2.3E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 28 109 6.7E-14 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 24 325 28.964 T 25-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 29 324 5.3E-105 T 25-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 24 325 56.985 T 25-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 SUPERFAMILY SSF56349 127 323 2.91E-52 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 SUPERFAMILY SSF47823 24 120 7.46E-30 T 25-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 Gene3D G3DSA:1.10.150.130 28 119 5.6E-21 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 PANTHER PTHR30349 27 324 2.0E-103 T 25-04-2016 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 PANTHER PTHR30349:SF5 27 324 2.0E-103 T 25-04-2016 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 Pfam PF00589 Phage integrase family 132 310 2.0E-43 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS03120 1bcf54b3f3d31ac8cf5fbd72f33a3d4c 325 Gene3D G3DSA:1.10.443.10 132 316 5.6E-53 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 SUPERFAMILY SSF46785 7 112 7.62E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 PANTHER PTHR30537 1 295 3.1E-108 T 25-04-2016 SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 Pfam PF03466 LysR substrate binding domain 90 291 3.8E-44 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 Gene3D G3DSA:1.10.10.10 4 85 2.1E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 Gene3D G3DSA:3.40.190.10 178 258 7.0E-9 T 25-04-2016 SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 Gene3D G3DSA:3.40.190.10 92 177 1.1E-25 T 25-04-2016 SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 SUPERFAMILY SSF53850 90 294 3.41E-46 T 25-04-2016 SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-12 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS16700 97217b260666e5d4d08150f9b0284d6a 297 PANTHER PTHR30537:SF5 1 295 3.1E-108 T 25-04-2016 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 SMART SM00357 6 69 1.3E-27 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 SUPERFAMILY SSF50249 2 68 2.1E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 PIRSF PIRSF002599 1 69 1.3E-23 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 Gene3D G3DSA:2.40.50.140 5 68 1.7E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 PANTHER PTHR11544:SF63 1 69 6.1E-38 T 25-04-2016 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 25-04-2016 IPR019844 Cold-shock conserved site SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 PANTHER PTHR11544 1 69 6.1E-38 T 25-04-2016 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 7.4E-29 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-19 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-19 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS14560 552b0ad559d4cb78014c8d804e58fdb6 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-19 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 PANTHER PTHR11579 13 221 2.6E-73 T 25-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 222 2.9E-60 T 25-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.556 T 25-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 25-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 SUPERFAMILY SSF53335 18 222 3.82E-44 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 221 6.6E-55 T 25-04-2016 SMD_RS08800 6bb7f0e9a4b01469694a42bba98924e0 225 Gene3D G3DSA:3.40.50.150 29 222 3.2E-58 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 Gene3D G3DSA:1.10.1740.10 10 81 5.5E-13 T 25-04-2016 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 PANTHER PTHR30173:SF15 10 389 2.0E-155 T 25-04-2016 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 Pfam PF08281 Sigma-70, region 4 119 170 1.8E-7 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 PANTHER PTHR30173 10 389 2.0E-155 T 25-04-2016 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 Gene3D G3DSA:1.10.10.10 113 173 4.1E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 SUPERFAMILY SSF88659 110 172 2.62E-10 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 SUPERFAMILY SSF88946 11 93 1.1E-13 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 Pfam PF04542 Sigma-70 region 2 21 81 2.6E-12 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS02515 a74f12b90a547ec4bc0c7d0b418e16a7 420 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 173 3.4E-14 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 Pfam PF01252 Signal peptidase (SPase) II 15 153 8.1E-34 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 ProSitePatterns PS00855 Signal peptidases II signature. 101 113 - T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 PANTHER PTHR33695 4 166 3.7E-46 T 25-04-2016 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 134 150 2.4E-15 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 2.4E-15 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 2.4E-15 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 159 15.284 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 PANTHER PTHR33695:SF1 4 166 3.7E-46 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS08175 414c8b0e2aee1afde8362aff5e4ae6cc 166 TIGRFAM TIGR00077 lspA: signal peptidase II 11 157 3.9E-37 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 5.4E-91 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82866 812 1037 1.03E-42 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:1.10.3850.10 283 499 4.8E-63 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82714 185 274 5.75E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1040 0.0 T 25-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:1.20.1640.10 857 1039 2.3E-42 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:3.30.70.1430 578 677 1.7E-24 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82693 41 134 1.33E-26 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82866 298 498 2.09E-51 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82693 138 184 3.66E-28 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PANTHER PTHR32063 1 1040 0.0 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:3.30.2090.10 729 817 6.8E-20 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:3.30.2090.10 184 277 4.2E-24 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82693 276 332 3.66E-28 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82714 729 815 2.88E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:3.30.70.1430 41 142 7.1E-33 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:3.30.70.1440 679 727 4.0E-16 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 Gene3D G3DSA:3.30.70.1440 824 856 4.0E-16 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 SUPERFAMILY SSF82693 574 678 5.02E-22 T 25-04-2016 SMD_RS09320 8b2971b05dc1ead363f3553ce6a5d6b9 1056 PANTHER PTHR32063:SF11 1 1040 0.0 T 25-04-2016 SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Gene3D G3DSA:2.40.128.130 769 1076 2.6E-62 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 PANTHER PTHR12338 766 1076 3.4E-53 T 25-04-2016 SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 PANTHER PTHR12338 577 724 3.4E-53 T 25-04-2016 SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 SUPERFAMILY SSF103515 781 1076 2.88E-41 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Pfam PF03797 Autotransporter beta-domain 808 1060 1.1E-38 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Gene3D G3DSA:2.160.20.20 171 335 6.5E-6 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Gene3D G3DSA:2.160.20.20 72 170 1.3E-6 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Gene3D G3DSA:2.160.20.20 336 747 1.7E-58 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 616 1076 3.2E-90 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Pfam PF13229 Right handed beta helix region 163 311 1.7E-5 T 25-04-2016 SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 Pfam PF03212 Pertactin 615 722 1.6E-5 T 25-04-2016 IPR004899 Pertactin, central region SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 SUPERFAMILY SSF51126 260 724 1.7E-40 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 SMART SM00869 807 1065 3.5E-28 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 PANTHER PTHR12338:SF5 766 1076 3.4E-53 T 25-04-2016 SMD_RS03370 d38eaf4e1f1732466a0609c185e86ac9 1076 PANTHER PTHR12338:SF5 577 724 3.4E-53 T 25-04-2016 SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 PIRSF PIRSF000401 1 306 2.6E-86 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 PANTHER PTHR18895 16 304 9.0E-134 T 25-04-2016 SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 PANTHER PTHR18895:SF69 16 304 9.0E-134 T 25-04-2016 SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 30.532 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 297 1.7E-63 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 Gene3D G3DSA:3.40.50.150 104 298 6.6E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 SUPERFAMILY SSF53335 71 301 3.85E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19940 2468d4820b4f5d109a7b4142e51871ed 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 1.8E-88 T 25-04-2016 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 SUPERFAMILY SSF88946 12 106 1.75E-20 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 52 83 - T 25-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 PANTHER PTHR30173:SF24 2 393 6.3E-38 T 25-04-2016 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 Pfam PF04542 Sigma-70 region 2 33 96 3.7E-12 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 184 1.8E-25 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 Gene3D G3DSA:1.10.1740.10 16 108 6.8E-21 T 25-04-2016 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 Gene3D G3DSA:1.10.10.10 130 186 1.4E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 SUPERFAMILY SSF88659 112 186 2.8E-11 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 PANTHER PTHR30173 2 393 6.3E-38 T 25-04-2016 SMD_RS06195 b87d86aa29db9656ef43aac4c58a7a49 405 Pfam PF08281 Sigma-70, region 4 132 180 7.7E-12 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 SMART SM00382 28 225 1.8E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09645 ad84262180dea03374d67039031d44c1 627 SMART SM00382 339 510 4.4E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09645 ad84262180dea03374d67039031d44c1 627 SUPERFAMILY SSF52540 2 94 1.11E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09645 ad84262180dea03374d67039031d44c1 627 SUPERFAMILY SSF52540 121 230 1.11E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09645 ad84262180dea03374d67039031d44c1 627 SUPERFAMILY SSF52540 308 511 5.8E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09645 ad84262180dea03374d67039031d44c1 627 PANTHER PTHR19211 4 568 6.4E-208 T 25-04-2016 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 Pfam PF00005 ABC transporter 332 464 1.1E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 Pfam PF00005 ABC transporter 20 180 3.7E-26 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 Gene3D G3DSA:3.40.50.300 4 275 3.4E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09645 ad84262180dea03374d67039031d44c1 627 Pfam PF16326 ABC transporter C-terminal domain 558 626 6.6E-23 T 25-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SMD_RS09645 ad84262180dea03374d67039031d44c1 627 Gene3D G3DSA:3.40.50.300 312 511 8.5E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09645 ad84262180dea03374d67039031d44c1 627 Pfam PF12848 ABC transporter 219 293 3.0E-9 T 25-04-2016 IPR032781 ABC-transporter extension domain SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 130 7.2E-50 T 25-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 Gene3D G3DSA:2.40.50.100 7 128 1.6E-50 T 25-04-2016 SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 31.192 T 25-04-2016 IPR002930 Glycine cleavage system H-protein SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 SUPERFAMILY SSF51230 4 128 2.49E-44 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 Pfam PF01597 Glycine cleavage H-protein 8 128 4.2E-46 T 25-04-2016 IPR002930 Glycine cleavage system H-protein SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 PANTHER PTHR11715 1 130 8.4E-67 T 25-04-2016 IPR002930 Glycine cleavage system H-protein SMD_RS16710 a155d6a3ef8c1f551b96b0748514ffc5 131 PANTHER PTHR11715:SF12 1 130 8.4E-67 T 25-04-2016 SMD_RS07295 08833a916d3ec51ffdbec08737393f0c 188 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 171 9.8E-18 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS07295 08833a916d3ec51ffdbec08737393f0c 188 PANTHER PTHR30417 10 182 1.1E-50 T 25-04-2016 SMD_RS07295 08833a916d3ec51ffdbec08737393f0c 188 PANTHER PTHR30417:SF4 10 182 1.1E-50 T 25-04-2016 SMD_RS07295 08833a916d3ec51ffdbec08737393f0c 188 SUPERFAMILY SSF55846 23 181 4.06E-34 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS07295 08833a916d3ec51ffdbec08737393f0c 188 Gene3D G3DSA:3.40.80.10 23 182 6.2E-35 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS07295 08833a916d3ec51ffdbec08737393f0c 188 SMART SM00644 18 155 1.1E-19 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 370 1.4E-155 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 Gene3D G3DSA:3.20.20.105 2 369 1.5E-160 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 363 57.096 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 PANTHER PTHR21148:SF26 1 369 1.8E-167 T 25-04-2016 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 SUPERFAMILY SSF51713 3 368 4.45E-155 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 370 4.0E-150 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 PANTHER PTHR21148 1 369 1.8E-167 T 25-04-2016 SMD_RS09560 fdbe648ff46a7183a56648854bdff020 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 1.3E-87 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 Gene3D G3DSA:2.40.50.100 208 241 7.1E-20 T 25-04-2016 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 Gene3D G3DSA:2.40.50.100 47 77 7.1E-20 T 25-04-2016 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 287 4.8E-17 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 PANTHER PTHR30386 16 350 9.3E-107 T 25-04-2016 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 SUPERFAMILY SSF111369 46 121 2.22E-10 T 25-04-2016 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 55 75 4.9E-7 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 4.9E-7 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 PANTHER PTHR30386:SF7 16 350 9.3E-107 T 25-04-2016 SMD_RS18500 09ea30283d9b500b94fb3a978c2f8d71 360 SUPERFAMILY SSF111369 183 284 2.22E-13 T 25-04-2016 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 Pfam PF00437 Type II/IV secretion system protein 200 466 2.0E-84 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 SUPERFAMILY SSF52540 187 574 1.27E-97 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 394 408 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 149 1.0E-17 T 25-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 14 576 2.1E-261 T 25-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 Gene3D G3DSA:3.40.50.300 306 575 9.5E-98 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 PANTHER PTHR30258:SF1 2 575 8.7E-257 T 25-04-2016 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 Gene3D G3DSA:3.30.450.90 185 299 2.0E-50 T 25-04-2016 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 PANTHER PTHR30258 2 575 8.7E-257 T 25-04-2016 SMD_RS17445 d2822a3c129d64ceaac49020d8853d9d 576 SUPERFAMILY SSF160246 11 146 6.8E-30 T 25-04-2016 SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 Gene3D G3DSA:3.10.310.10 4 131 4.2E-37 T 25-04-2016 SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 PANTHER PTHR13774:SF18 1 290 2.5E-100 T 25-04-2016 SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 SUPERFAMILY SSF54506 4 289 9.07E-67 T 25-04-2016 SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 PIRSF PIRSF016184 1 290 3.4E-81 T 25-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 Pfam PF02567 Phenazine biosynthesis-like protein 9 280 6.0E-54 T 25-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 Gene3D G3DSA:3.10.310.10 147 279 4.1E-40 T 25-04-2016 SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 PANTHER PTHR13774 1 290 2.5E-100 T 25-04-2016 SMD_RS05715 c281d21e0d5b3d86fe985c5a2e083ed5 290 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 285 8.8E-57 T 25-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 SUPERFAMILY SSF47384 221 301 6.47E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 Gene3D G3DSA:1.10.287.130 230 288 2.4E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 301 1.2E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 SMART SM00387 347 457 3.4E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 Gene3D G3DSA:3.30.565.10 289 457 9.1E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 SMART SM00388 238 303 3.7E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PANTHER PTHR24423:SF474 116 143 1.0E-59 T 25-04-2016 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 3.1E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 3.1E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.1E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 SUPERFAMILY SSF55874 293 455 2.49E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 455 2.9E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PANTHER PTHR24423 116 143 1.0E-59 T 25-04-2016 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 Pfam PF08521 Two-component sensor kinase N-terminal 21 162 7.0E-27 T 25-04-2016 IPR013727 Two-component sensor kinase, N-terminal SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PANTHER PTHR24423:SF474 180 455 1.0E-59 T 25-04-2016 SMD_RS06605 1a2e231e95aec516bae01c014c0bdb1b 459 PANTHER PTHR24423 180 455 1.0E-59 T 25-04-2016 SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 Gene3D G3DSA:3.90.226.10 12 203 2.5E-61 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 264 6.2E-51 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 SUPERFAMILY SSF52096 12 264 4.38E-74 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 PANTHER PTHR11941 1 262 1.5E-165 T 25-04-2016 SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 PANTHER PTHR11941:SF89 1 262 1.5E-165 T 25-04-2016 SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 25-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SMD_RS01360 02f1679fbc17cf806e98dbbb9b703edf 265 Gene3D G3DSA:1.10.12.10 207 264 6.6E-18 T 25-04-2016 IPR014748 Crontonase, C-terminal SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 PANTHER PTHR23389 6 482 1.4E-197 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 PANTHER PTHR23389 540 590 1.4E-197 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:1.10.150.20 544 560 2.3E-22 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:1.10.150.20 435 486 2.3E-22 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 397 3.7E-33 T 25-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 490 1.2E-191 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Pfam PF12826 Helix-hairpin-helix motif 567 630 3.4E-15 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.6E-11 T 25-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SUPERFAMILY SSF50249 318 399 2.23E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SUPERFAMILY SSF47781 404 490 3.34E-51 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SUPERFAMILY SSF47781 548 637 3.34E-51 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SUPERFAMILY SSF56091 6 316 3.08E-114 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 745 815 3.2E-13 T 25-04-2016 IPR001357 BRCT domain SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 25-04-2016 IPR018239 NAD-dependent DNA ligase, active site SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:3.40.50.10190 744 819 5.3E-24 T 25-04-2016 IPR001357 BRCT domain SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:1.10.287.610 4 68 5.1E-25 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Hamap MF_01588 DNA ligase [ligA]. 3 817 52.685 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SMART SM00532 4 448 5.6E-258 T 25-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:1.10.150.20 562 637 5.3E-24 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SUPERFAMILY SSF52113 744 818 6.17E-19 T 25-04-2016 IPR001357 BRCT domain SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 SMART SM00292 743 820 2.9E-14 T 25-04-2016 IPR001357 BRCT domain SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 PANTHER PTHR23389:SF9 6 482 1.4E-197 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 PANTHER PTHR23389:SF9 540 590 1.4E-197 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:2.40.50.140 319 391 3.3E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Gene3D G3DSA:3.30.470.30 119 252 5.9E-50 T 25-04-2016 SMD_RS14215 72dc9518f4396f918d00d36cdab080b1 821 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 318 6.8E-121 T 25-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SMD_RS05360 00588471401ef2ba527f1445dd21901d 235 PANTHER PTHR33545:SF5 30 232 1.8E-70 T 25-04-2016 SMD_RS05360 00588471401ef2ba527f1445dd21901d 235 PANTHER PTHR33545 30 232 1.8E-70 T 25-04-2016 SMD_RS05360 00588471401ef2ba527f1445dd21901d 235 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 51 223 5.0E-33 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 248 33.264 T 25-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 SUPERFAMILY SSF53167 5 246 1.29E-75 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 Pfam PF01048 Phosphorylase superfamily 6 244 2.2E-43 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 PANTHER PTHR11904:SF1 2 247 3.3E-85 T 25-04-2016 SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 PANTHER PTHR11904 2 247 3.3E-85 T 25-04-2016 IPR001369 PNP/MTAP phosphorylase SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 Gene3D G3DSA:3.40.50.1580 3 245 3.3E-75 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMD_RS16180 cebc383ee6de98ec73c97479ac397554 248 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 25-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 SMD_RS17050 55e35bd9d45970ae14f8e03162ef00a0 119 Gene3D G3DSA:3.10.450.40 9 98 4.1E-31 T 25-04-2016 SMD_RS17050 55e35bd9d45970ae14f8e03162ef00a0 119 SUPERFAMILY SSF160719 11 98 5.1E-26 T 25-04-2016 SMD_RS17050 55e35bd9d45970ae14f8e03162ef00a0 119 PANTHER PTHR35862:SF2 1 99 1.6E-29 T 25-04-2016 SMD_RS17050 55e35bd9d45970ae14f8e03162ef00a0 119 PANTHER PTHR35862 1 99 1.6E-29 T 25-04-2016 SMD_RS17050 55e35bd9d45970ae14f8e03162ef00a0 119 Pfam PF04965 Gene 25-like lysozyme 15 93 3.3E-13 T 25-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD SMD_RS06965 a98b7ab9c08feadeb162dd9a98307a10 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 9 151 34.253 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMD_RS06965 a98b7ab9c08feadeb162dd9a98307a10 152 SUPERFAMILY SSF54637 8 148 1.73E-45 T 25-04-2016 IPR029069 HotDog domain SMD_RS06965 a98b7ab9c08feadeb162dd9a98307a10 152 Gene3D G3DSA:3.10.129.10 7 150 2.6E-53 T 25-04-2016 IPR029069 HotDog domain SMD_RS06965 a98b7ab9c08feadeb162dd9a98307a10 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 148 5.4E-60 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMD_RS06965 a98b7ab9c08feadeb162dd9a98307a10 152 Pfam PF07977 FabA-like domain 18 143 3.7E-39 T 25-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMD_RS06965 a98b7ab9c08feadeb162dd9a98307a10 152 PANTHER PTHR30272 8 152 2.3E-68 T 25-04-2016 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Gene3D G3DSA:2.40.50.140 1026 1090 0.001 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 SUPERFAMILY SSF160975 847 895 6.28E-5 T 25-04-2016 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Pfam PF02811 PHP domain 8 184 1.5E-23 T 25-04-2016 IPR004013 PHP domain GO:0003824 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Gene3D G3DSA:1.10.150.280 850 897 2.4E-6 T 25-04-2016 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1058 0.0 T 25-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Gene3D G3DSA:3.20.20.140 6 268 2.4E-17 T 25-04-2016 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 751 3.6E-168 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Pfam PF01336 OB-fold nucleic acid binding domain 1028 1093 3.2E-7 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 Pfam PF14579 Helix-hairpin-helix motif 826 915 7.4E-26 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 PANTHER PTHR32294:SF0 2 1191 0.0 T 25-04-2016 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 SUPERFAMILY SSF89550 6 249 9.61E-11 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 PANTHER PTHR32294 2 1191 0.0 T 25-04-2016 SMD_RS06945 ffcd9c0c74c08f1fe61f70807cd0dd3a 1196 SMART SM00481 7 88 3.8E-13 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 437 447 - T 25-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PANTHER PTHR10795:SF419 254 502 2.2E-77 T 25-04-2016 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 Pfam PF00082 Subtilase family 183 480 8.3E-52 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 188 199 - T 25-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 537 602 8.0E-9 T 25-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 SUPERFAMILY SSF52743 248 504 2.23E-72 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 SUPERFAMILY SSF52743 168 219 2.23E-72 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PRINTS PR00723 Subtilisin serine protease family (S8) signature 251 264 7.8E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 202 7.8E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PRINTS PR00723 Subtilisin serine protease family (S8) signature 436 452 7.8E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PANTHER PTHR10795:SF419 85 232 2.2E-77 T 25-04-2016 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PANTHER PTHR10795:SF419 15 60 2.2E-77 T 25-04-2016 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PANTHER PTHR10795 254 502 2.2E-77 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 Gene3D G3DSA:3.40.50.200 117 504 5.8E-84 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PANTHER PTHR10795 85 232 2.2E-77 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03145 9ddb1fa5b7c7ce3962662572b1f125d5 617 PANTHER PTHR10795 15 60 2.2E-77 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 SUPERFAMILY SSF52096 484 544 1.33E-39 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 SUPERFAMILY SSF52096 338 455 1.33E-39 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 SUPERFAMILY SSF52096 221 296 3.48E-16 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 PANTHER PTHR33209:SF1 5 640 4.8E-207 T 25-04-2016 SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 PIRSF PIRSF001217 16 636 1.2E-200 T 25-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 PANTHER PTHR33209 5 640 4.8E-207 T 25-04-2016 SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 SUPERFAMILY SSF52096 46 189 3.48E-16 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 368 554 6.8E-50 T 25-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 Pfam PF01343 Peptidase family S49 407 558 2.7E-47 T 25-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 Pfam PF01343 Peptidase family S49 150 265 7.1E-21 T 25-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 Gene3D G3DSA:3.90.226.10 43 185 1.2E-49 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 Gene3D G3DSA:3.90.226.10 485 563 1.4E-59 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 Gene3D G3DSA:3.90.226.10 229 327 1.2E-49 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 Gene3D G3DSA:3.90.226.10 339 447 1.4E-59 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19705 20ccdf5e660d8c5f1dbb7a2d44675e67 640 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 24 584 9.6E-158 T 25-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 PANTHER PTHR32552 21 712 6.1E-107 T 25-04-2016 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 Pfam PF00593 TonB dependent receptor 472 708 1.3E-27 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 712 3.1E-84 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 SUPERFAMILY SSF56935 31 712 3.21E-124 T 25-04-2016 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 Gene3D G3DSA:2.40.170.20 184 712 1.2E-121 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 PANTHER PTHR32552:SF19 21 712 6.1E-107 T 25-04-2016 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 169 6.6E-19 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05240 5db9e911bddfd43e6828c3833b016685 712 Gene3D G3DSA:2.170.130.10 30 179 3.8E-34 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 18 191 0.0057 T 25-04-2016 SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 Gene3D G3DSA:3.40.50.720 14 263 2.4E-71 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 3.4E-38 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.4E-38 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.4E-38 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.4E-38 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.4E-38 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.4E-38 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 SUPERFAMILY SSF51735 17 260 3.29E-69 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 260 5.4E-61 T 25-04-2016 SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PANTHER PTHR24314 3 267 1.4E-71 T 25-04-2016 SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.0E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.0E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.0E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS19040 0e670069a8f9b62658b9e11fad374a5f 267 PANTHER PTHR24314:SF6 3 267 1.4E-71 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 PANTHER PTHR23083:SF195 176 556 2.4E-41 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 PANTHER PTHR23083:SF195 32 49 2.4E-41 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 PANTHER PTHR23083:SF195 72 140 2.4E-41 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 SUPERFAMILY SSF48452 176 336 2.8E-12 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 SMART SM00028 417 450 29.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 SMART SM00028 179 212 29.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 SMART SM00028 451 485 130.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 SMART SM00028 519 552 0.052 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 SUPERFAMILY SSF48452 403 553 2.33E-24 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 Pfam PF13181 Tetratricopeptide repeat 526 552 0.12 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 PANTHER PTHR23083 176 556 2.4E-41 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 PANTHER PTHR23083 32 49 2.4E-41 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 PANTHER PTHR23083 72 140 2.4E-41 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 Pfam PF13432 Tetratricopeptide repeat 186 235 0.0042 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 Pfam PF13432 Tetratricopeptide repeat 462 512 6.1E-5 T 25-04-2016 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 Gene3D G3DSA:1.25.40.10 375 553 4.6E-27 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS04000 32bca20a86d4bb8b4cea27c77466ad94 564 Gene3D G3DSA:1.25.40.10 48 336 4.1E-18 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 PANTHER PTHR30367 7 285 1.4E-91 T 25-04-2016 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 Pfam PF13533 Biotin-lipoyl like 47 95 7.8E-17 T 25-04-2016 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 PANTHER PTHR30367:SF5 7 285 1.4E-91 T 25-04-2016 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 234 2.8E-36 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 Gene3D G3DSA:2.40.50.100 153 185 2.3E-18 T 25-04-2016 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 Gene3D G3DSA:2.40.50.100 47 80 2.3E-18 T 25-04-2016 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 SUPERFAMILY SSF111369 45 181 1.7E-24 T 25-04-2016 SMD_RS21810 dba803e0bfb77126c323bbf288045969 305 Pfam PF13437 HlyD family secretion protein 156 236 6.0E-13 T 25-04-2016 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 SUPERFAMILY SSF53328 88 283 2.35E-59 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 Gene3D G3DSA:3.30.70.260 5 82 2.2E-27 T 25-04-2016 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 Pfam PF00551 Formyl transferase 88 263 3.0E-38 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 48.053 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 1.6E-55 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 1.6E-55 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.6E-55 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 1.6E-55 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 1.6E-55 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.6E-55 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 Pfam PF01842 ACT domain 6 56 2.5E-8 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 1.3E-101 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PANTHER PTHR10520 4 276 8.7E-149 T 25-04-2016 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PIRSF PIRSF036480 2 283 3.1E-111 T 25-04-2016 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 Gene3D G3DSA:3.40.50.170 87 278 1.4E-54 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 SUPERFAMILY SSF55021 6 82 1.54E-19 T 25-04-2016 SMD_RS01315 3228be23c2c66a7b3cd56cc709fc92ea 283 PANTHER PTHR10520:SF7 4 276 8.7E-149 T 25-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 8.9E-121 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 25-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 8.1E-29 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 136 209 3.8E-6 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 44.751 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 PANTHER PTHR11931 2 249 5.0E-156 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 Gene3D G3DSA:3.40.50.1240 2 249 1.2E-95 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 SUPERFAMILY SSF53254 2 246 8.64E-79 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS06650 45a0cfcb9c54447a4078b980fca89d30 249 SMART SM00855 4 190 1.1E-26 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 Gene3D G3DSA:3.90.650.10 176 356 1.0E-17 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 TIGRFAM TIGR00476 selD: selenide, water dikinase 18 327 3.1E-129 T 25-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 Hamap MF_00625 Selenide, water dikinase [selD]. 16 359 42.855 T 25-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 SUPERFAMILY SSF55326 18 172 7.33E-39 T 25-04-2016 SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 Gene3D G3DSA:3.30.1330.10 53 173 2.6E-29 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 PANTHER PTHR10256 18 352 1.9E-114 T 25-04-2016 SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 Pfam PF02769 AIR synthase related protein, C-terminal domain 180 353 5.7E-29 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 167 1.1E-19 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 PIRSF PIRSF036407 11 358 5.3E-111 T 25-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SMD_RS17925 a0ca804d46daab7afd357391a9f91459 359 SUPERFAMILY SSF56042 175 353 6.28E-48 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 PANTHER PTHR26402 1 225 1.4E-86 T 25-04-2016 SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 Gene3D G3DSA:3.40.50.2300 2 121 3.1E-36 T 25-04-2016 SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 SUPERFAMILY SSF52172 2 174 7.68E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 SMART SM00448 1 113 2.9E-39 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 PANTHER PTHR26402:SF552 1 225 1.4E-86 T 25-04-2016 SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.4E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 Gene3D G3DSA:1.10.10.10 124 222 1.0E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17490 75168cc00a6257e98007ca4dd04cb516 225 SMART SM00862 146 220 5.1E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Gene3D G3DSA:1.20.1640.10 287 501 5.5E-60 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82866 814 1012 1.83E-43 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82866 292 492 3.66E-49 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Gene3D G3DSA:3.30.70.1430 555 645 7.5E-9 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82714 185 267 4.58E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82714 705 787 7.46E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 7.5E-78 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PANTHER PTHR32063:SF34 3 1012 0.0 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 5.3E-290 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 PANTHER PTHR32063 3 1012 0.0 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82693 552 651 7.32E-12 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82693 42 127 3.4E-21 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Gene3D G3DSA:3.30.2090.10 185 266 1.2E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Gene3D G3DSA:3.30.2090.10 705 788 4.1E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82693 140 184 9.94E-23 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82693 270 326 9.94E-23 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Gene3D G3DSA:1.10.3850.10 797 1012 8.2E-55 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82693 790 835 1.44E-5 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 SUPERFAMILY SSF82693 661 702 1.44E-5 T 25-04-2016 SMD_RS04810 d62feddcc3d7f7067b3c1e0176c8c9e8 1022 Gene3D G3DSA:3.30.70.1430 42 143 1.5E-26 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 3.7E-25 T 25-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SMD_RS04350 f97635305ba26302deab628c87353172 626 Gene3D G3DSA:2.30.38.10 414 495 3.0E-6 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 Gene3D G3DSA:3.40.50.980 54 242 6.9E-36 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 625 0.0 T 25-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 SMD_RS04350 f97635305ba26302deab628c87353172 626 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 590 6.2E-25 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMD_RS04350 f97635305ba26302deab628c87353172 626 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMD_RS04350 f97635305ba26302deab628c87353172 626 Gene3D G3DSA:3.30.300.30 499 605 3.0E-27 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 PANTHER PTHR24095:SF165 1 624 0.0 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 SUPERFAMILY SSF56801 2 621 1.44E-161 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 Gene3D G3DSA:3.40.50.980 243 395 3.9E-26 T 25-04-2016 SMD_RS04350 f97635305ba26302deab628c87353172 626 Pfam PF00501 AMP-binding enzyme 60 501 8.7E-84 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS04350 f97635305ba26302deab628c87353172 626 PANTHER PTHR24095 1 624 0.0 T 25-04-2016 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 Gene3D G3DSA:3.90.1170.10 25 134 2.0E-52 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 PANTHER PTHR12220 1 137 1.8E-71 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.3E-39 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.3E-39 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.3E-39 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.3E-39 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.5 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 SUPERFAMILY SSF54686 1 134 2.49E-54 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.8E-57 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMD_RS04205 c34668c08f332d6427dd99c32eef7488 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.2E-48 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00412 Epoxide hydrolase signature 69 87 2.0E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00412 Epoxide hydrolase signature 257 273 2.0E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00412 Epoxide hydrolase signature 89 104 2.0E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00412 Epoxide hydrolase signature 291 313 2.0E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 259 273 3.2E-12 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 3.2E-12 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 3.2E-12 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PANTHER PTHR10992:SF859 40 316 8.9E-122 T 25-04-2016 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 SUPERFAMILY SSF53474 43 316 4.82E-68 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 Pfam PF00561 alpha/beta hydrolase fold 63 296 4.0E-28 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 Gene3D G3DSA:3.40.50.1820 42 315 2.3E-79 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11525 7bd41c70094146cf9f35e3aad7985907 317 PANTHER PTHR10992 40 316 8.9E-122 T 25-04-2016 SMD_RS15870 af91dd41740ed84e14599fecf773c628 216 PANTHER PTHR33446:SF2 134 214 1.0E-13 T 25-04-2016 SMD_RS15870 af91dd41740ed84e14599fecf773c628 216 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 135 214 4.8E-19 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS15870 af91dd41740ed84e14599fecf773c628 216 Gene3D G3DSA:3.30.1150.10 109 211 1.7E-13 T 25-04-2016 SMD_RS15870 af91dd41740ed84e14599fecf773c628 216 PANTHER PTHR33446 134 214 1.0E-13 T 25-04-2016 SMD_RS15870 af91dd41740ed84e14599fecf773c628 216 SUPERFAMILY SSF74653 130 212 1.14E-19 T 25-04-2016 SMD_RS15870 af91dd41740ed84e14599fecf773c628 216 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 137 214 3.6E-17 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 133 6.1E-35 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Gene3D G3DSA:3.40.120.10 5 121 1.7E-34 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 SUPERFAMILY SSF53738 150 253 7.46E-28 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 SUPERFAMILY SSF53738 5 174 6.77E-36 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.8E-28 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.8E-28 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 2.8E-28 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.8E-28 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 444 7.2E-12 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Gene3D G3DSA:3.40.120.10 169 246 2.8E-27 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 SUPERFAMILY SSF53738 255 360 7.06E-31 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Gene3D G3DSA:3.40.120.10 247 360 4.2E-38 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 365 4.2E-24 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Gene3D G3DSA:3.30.310.50 366 448 2.0E-19 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 PANTHER PTHR22573 6 448 1.5E-180 T 25-04-2016 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 SUPERFAMILY SSF55957 365 448 3.66E-20 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 PANTHER PTHR22573:SF18 6 448 1.5E-180 T 25-04-2016 SMD_RS03005 7f031b7e07410092e7203b4f3a5f0533 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 151 250 6.8E-22 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 PANTHER PTHR30157 247 297 2.7E-94 T 25-04-2016 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 PANTHER PTHR30157 1 219 2.7E-94 T 25-04-2016 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 PANTHER PTHR30157:SF0 247 297 2.7E-94 T 25-04-2016 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 PANTHER PTHR30157:SF0 1 219 2.7E-94 T 25-04-2016 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 130 4.6E-41 T 25-04-2016 IPR013113 FAD-binding 9, siderophore-interacting SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 SUPERFAMILY SSF63380 7 127 3.4E-9 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 Pfam PF04954 Siderophore-interacting protein 148 293 1.7E-35 T 25-04-2016 IPR007037 Siderophore-interacting protein SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 Gene3D G3DSA:3.40.50.80 140 294 5.8E-41 T 25-04-2016 SMD_RS16340 70e05ce546bcad1cce8c588db89ed0e9 297 Gene3D G3DSA:2.40.30.10 4 128 4.6E-34 T 25-04-2016 SMD_RS19600 ee4a3eed3bc756e48a797a0d4d85b389 378 PIRSF PIRSF001259 26 378 4.2E-83 T 25-04-2016 SMD_RS19600 ee4a3eed3bc756e48a797a0d4d85b389 378 PANTHER PTHR21327 177 374 4.2E-78 T 25-04-2016 SMD_RS19600 ee4a3eed3bc756e48a797a0d4d85b389 378 Pfam PF00925 GTP cyclohydrolase II 179 343 1.6E-49 T 25-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMD_RS19600 ee4a3eed3bc756e48a797a0d4d85b389 378 SUPERFAMILY SSF142695 189 345 4.45E-48 T 25-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMD_RS19600 ee4a3eed3bc756e48a797a0d4d85b389 378 PANTHER PTHR21327:SF6 177 374 4.2E-78 T 25-04-2016 SMD_RS19600 ee4a3eed3bc756e48a797a0d4d85b389 378 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 174 370 38.027 T 25-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMD_RS03835 6000e5601be030807a3a216d27272802 318 SUPERFAMILY SSF51569 5 316 9.84E-93 T 25-04-2016 SMD_RS03835 6000e5601be030807a3a216d27272802 318 Pfam PF00923 Transaldolase 16 313 4.7E-86 T 25-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS03835 6000e5601be030807a3a216d27272802 318 ProSitePatterns PS00958 Transaldolase active site. 131 148 - T 25-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS03835 6000e5601be030807a3a216d27272802 318 PANTHER PTHR10683:SF18 5 318 6.3E-123 T 25-04-2016 SMD_RS03835 6000e5601be030807a3a216d27272802 318 PANTHER PTHR10683 5 318 6.3E-123 T 25-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS03835 6000e5601be030807a3a216d27272802 318 ProSitePatterns PS01054 Transaldolase signature 1. 33 41 - T 25-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS03835 6000e5601be030807a3a216d27272802 318 Gene3D G3DSA:3.20.20.70 5 316 7.2E-105 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 25-04-2016 IPR033116 Serine proteases, trypsin family, serine active site SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 Pfam PF00089 Trypsin 32 258 1.5E-53 T 25-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 Gene3D G3DSA:2.40.10.10 71 133 1.1E-21 T 25-04-2016 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 Gene3D G3DSA:2.40.10.10 134 270 5.9E-37 T 25-04-2016 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 25-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 PANTHER PTHR24276 1 269 7.1E-82 T 25-04-2016 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 5.6E-17 T 25-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 123 137 5.6E-17 T 25-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 5.6E-17 T 25-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 SMART SM00020 31 266 1.8E-72 T 25-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 Gene3D G3DSA:2.40.10.10 32 70 3.5E-20 T 25-04-2016 SMD_RS00405 5a55b6a38ad59eadd241b68ec517d2f1 273 SUPERFAMILY SSF50494 11 270 2.48E-70 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.35 T 25-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 21 45 2.9E-4 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.1E-5 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 SUPERFAMILY SSF51161 2 262 3.64E-71 T 25-04-2016 IPR011004 Trimeric LpxA-like SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 PIRSF PIRSF000456 5 263 5.4E-96 T 25-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 PANTHER PTHR23416:SF8 1 255 2.7E-120 T 25-04-2016 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 PANTHER PTHR23416 1 255 2.7E-120 T 25-04-2016 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 6.5E-26 T 25-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 Gene3D G3DSA:1.20.1180.10 198 263 8.4E-23 T 25-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 2.3E-101 T 25-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMD_RS06960 4fa402ab58f870febd60bf78695ba38e 263 Gene3D G3DSA:2.160.10.10 6 188 4.3E-44 T 25-04-2016 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Gene3D G3DSA:1.10.1780.10 1 141 1.7E-43 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 650 1.5E-45 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 SMART SM00382 491 627 5.0E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 SMART SM00382 210 355 3.8E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 SUPERFAMILY SSF52540 172 430 1.17E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.0E-16 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 7.7E-22 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Gene3D G3DSA:1.10.8.60 667 751 3.3E-29 T 25-04-2016 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 SUPERFAMILY SSF81923 1 141 8.63E-58 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 SUPERFAMILY SSF52540 441 748 6.07E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Gene3D G3DSA:3.40.50.300 447 666 4.2E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PANTHER PTHR11638 154 761 0.0 T 25-04-2016 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PANTHER PTHR11638 1 138 0.0 T 25-04-2016 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PANTHER PTHR11638:SF111 154 761 0.0 T 25-04-2016 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PANTHER PTHR11638:SF111 1 138 0.0 T 25-04-2016 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Gene3D G3DSA:3.40.50.300 174 353 4.9E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 1.7E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 1.7E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 1.7E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 1.7E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 SMART SM01086 657 746 6.4E-33 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 312 1.6E-10 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 25-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 SMD_RS11055 413781ad9d308f2887db2d9dcaa375d8 761 Gene3D G3DSA:1.10.8.60 357 439 2.8E-29 T 25-04-2016 SMD_RS16560 5dd04dfd697ca793e529a2050dd34da2 214 SUPERFAMILY SSF101874 20 188 6.54E-41 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS16560 5dd04dfd697ca793e529a2050dd34da2 214 Pfam PF04264 YceI-like domain 24 187 3.2E-32 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS16560 5dd04dfd697ca793e529a2050dd34da2 214 PANTHER PTHR34406:SF1 1 196 2.5E-47 T 25-04-2016 SMD_RS16560 5dd04dfd697ca793e529a2050dd34da2 214 Gene3D G3DSA:2.40.128.110 23 192 1.9E-43 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS16560 5dd04dfd697ca793e529a2050dd34da2 214 PANTHER PTHR34406 1 196 2.5E-47 T 25-04-2016 SMD_RS16560 5dd04dfd697ca793e529a2050dd34da2 214 SMART SM00867 23 188 3.6E-44 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 Gene3D G3DSA:3.40.190.10 2 108 1.8E-43 T 25-04-2016 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 9.4E-102 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 SUPERFAMILY SSF53850 2 216 9.15E-80 T 25-04-2016 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.064 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 25-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 Gene3D G3DSA:3.30.160.40 219 302 2.1E-24 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 2.7E-16 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 9.7E-43 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 9.7E-43 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 9.7E-43 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 9.7E-43 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 9.7E-43 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 SUPERFAMILY SSF54782 218 302 3.79E-24 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 209 1.4E-73 T 25-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PANTHER PTHR11557 1 303 1.3E-140 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 PIRSF PIRSF001438 1 303 8.2E-113 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS19235 37fecad0dbd3c0377124b08348f422ee 303 Gene3D G3DSA:3.40.190.10 109 197 1.7E-36 T 25-04-2016 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 Gene3D G3DSA:3.30.1130.10 72 198 1.2E-53 T 25-04-2016 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 PANTHER PTHR11109 18 197 8.9E-97 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 SUPERFAMILY SSF55620 11 198 4.3E-74 T 25-04-2016 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 77 93 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 20 197 2.4E-65 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 Gene3D G3DSA:1.10.286.10 14 64 2.3E-23 T 25-04-2016 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 Pfam PF01227 GTP cyclohydrolase I 20 197 4.0E-72 T 25-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 125 135 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMD_RS21795 8246adcbc01d9ffc88f8ed93600dbd6e 203 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 15 198 38.999 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 PANTHER PTHR23501 1 489 3.2E-141 T 25-04-2016 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 9 434 1.0E-70 T 25-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 Pfam PF07690 Major Facilitator Superfamily 14 405 7.1E-51 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 Gene3D G3DSA:1.20.1250.20 6 191 7.9E-30 T 25-04-2016 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 PANTHER PTHR23501:SF7 1 489 3.2E-141 T 25-04-2016 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 SUPERFAMILY SSF103473 463 488 1.83E-66 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 SUPERFAMILY SSF103473 245 415 1.83E-66 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 SUPERFAMILY SSF103473 5 199 1.83E-66 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 Gene3D G3DSA:1.20.1250.20 461 488 6.0E-15 T 25-04-2016 SMD_RS19300 af1e89092672fc5a5c8051bc21dfea4b 490 Gene3D G3DSA:1.20.1250.20 257 413 6.0E-15 T 25-04-2016 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 PRINTS PR00990 Ribokinase signature 7 28 1.5E-19 T 25-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 PRINTS PR00990 Ribokinase signature 103 116 1.5E-19 T 25-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 PRINTS PR00990 Ribokinase signature 225 236 1.5E-19 T 25-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 PRINTS PR00990 Ribokinase signature 172 187 1.5E-19 T 25-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 PANTHER PTHR10584:SF184 1 312 2.6E-68 T 25-04-2016 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 SUPERFAMILY SSF53613 2 312 2.18E-61 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 Gene3D G3DSA:3.40.1190.20 3 314 2.1E-72 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 PANTHER PTHR10584 1 312 2.6E-68 T 25-04-2016 SMD_RS03625 8aa7b60a925465e47d734733caacc8e7 321 Pfam PF00294 pfkB family carbohydrate kinase 4 311 3.2E-49 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 Gene3D G3DSA:2.160.10.10 105 187 2.5E-8 T 25-04-2016 SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 Gene3D G3DSA:2.160.10.10 19 104 3.1E-21 T 25-04-2016 SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 SUPERFAMILY SSF51161 20 189 5.98E-32 T 25-04-2016 IPR011004 Trimeric LpxA-like SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 104 3.6E-6 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 70 1.8E-7 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 PANTHER PTHR22572 146 171 5.3E-14 T 25-04-2016 SMD_RS01125 d4ea459d8780e3ceac7f3b37362d6717 201 PANTHER PTHR22572 20 119 5.3E-14 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 Gene3D G3DSA:3.50.30.30 118 249 2.3E-4 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 Gene3D G3DSA:3.40.630.10 49 101 2.7E-59 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 Gene3D G3DSA:3.40.630.10 258 457 2.7E-59 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 Pfam PF04389 Peptidase family M28 259 445 2.8E-24 T 25-04-2016 IPR007484 Peptidase M28 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 SUPERFAMILY SSF53187 251 457 7.11E-53 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 SUPERFAMILY SSF53187 47 97 7.11E-53 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 SUPERFAMILY SSF52025 111 242 6.28E-5 T 25-04-2016 SMD_RS17580 f4b5fdb68b9ba0717654d21a23e35d05 473 PANTHER PTHR12053 38 464 2.5E-144 T 25-04-2016 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 PANTHER PTHR30173 21 199 3.0E-32 T 25-04-2016 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 PANTHER PTHR30173:SF31 21 199 3.0E-32 T 25-04-2016 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 SUPERFAMILY SSF88946 39 127 5.1E-20 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 202 1.0E-24 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 Pfam PF08281 Sigma-70, region 4 148 199 3.5E-15 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 Pfam PF04542 Sigma-70 region 2 51 117 1.8E-15 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 SUPERFAMILY SSF88659 141 202 3.49E-13 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 Gene3D G3DSA:1.10.10.10 145 204 7.0E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11330 c4a0bb90cd2bcb6a5de76da4f68024cc 207 Gene3D G3DSA:1.10.1740.10 40 133 5.2E-19 T 25-04-2016 SMD_RS03580 c892a259543af379e9d32f768e372621 903 Gene3D G3DSA:1.20.1440.90 287 405 2.0E-12 T 25-04-2016 SMD_RS03580 c892a259543af379e9d32f768e372621 903 SUPERFAMILY SSF51621 18 903 1.15E-255 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PANTHER PTHR30523:SF0 14 903 0.0 T 25-04-2016 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PANTHER PTHR30523 14 903 0.0 T 25-04-2016 SMD_RS03580 c892a259543af379e9d32f768e372621 903 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 147 158 - T 25-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 Pfam PF00311 Phosphoenolpyruvate carboxylase 142 903 6.8E-226 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 560 572 - T 25-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 10 903 16.919 T 25-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 734 760 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 215 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 558 578 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 600 629 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 159 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS03580 c892a259543af379e9d32f768e372621 903 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 402 422 1.4E-50 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMD_RS19760 c2459a265995fe0794b0ae9a84017272 205 PANTHER PTHR30506 1 203 8.4E-109 T 25-04-2016 SMD_RS19760 c2459a265995fe0794b0ae9a84017272 205 PANTHER PTHR30506:SF2 1 203 8.4E-109 T 25-04-2016 SMD_RS19760 c2459a265995fe0794b0ae9a84017272 205 Pfam PF03458 UPF0126 domain 5 78 8.7E-19 T 25-04-2016 IPR005115 Uncharacterised domain UPF0126 SMD_RS19760 c2459a265995fe0794b0ae9a84017272 205 Pfam PF03458 UPF0126 domain 91 163 1.3E-19 T 25-04-2016 IPR005115 Uncharacterised domain UPF0126 SMD_RS04250 272bcb5c14b58eb059548c7d13fb3487 117 SUPERFAMILY SSF53137 3 115 1.92E-46 T 25-04-2016 SMD_RS04250 272bcb5c14b58eb059548c7d13fb3487 117 Gene3D G3DSA:3.30.420.100 24 117 1.4E-33 T 25-04-2016 SMD_RS04250 272bcb5c14b58eb059548c7d13fb3487 117 PANTHER PTHR12899 1 117 1.8E-36 T 25-04-2016 SMD_RS04250 272bcb5c14b58eb059548c7d13fb3487 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.4E-36 T 25-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04250 272bcb5c14b58eb059548c7d13fb3487 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.116 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04250 272bcb5c14b58eb059548c7d13fb3487 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.8E-35 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04360 c81c9bd5d79b5ebf3e8facb94fb73e56 351 Pfam PF05076 Suppressor of fused protein (SUFU) 42 208 2.6E-48 T 25-04-2016 IPR020941 Suppressor of fused-like domain SMD_RS04360 c81c9bd5d79b5ebf3e8facb94fb73e56 351 PANTHER PTHR10928:SF2 11 231 5.2E-47 T 25-04-2016 SMD_RS04360 c81c9bd5d79b5ebf3e8facb94fb73e56 351 PIRSF PIRSF038192 1 351 3.6E-111 T 25-04-2016 IPR017429 Suppressor of fused, bacterial SMD_RS04360 c81c9bd5d79b5ebf3e8facb94fb73e56 351 SUPERFAMILY SSF103359 8 228 8.76E-75 T 25-04-2016 SMD_RS04360 c81c9bd5d79b5ebf3e8facb94fb73e56 351 PANTHER PTHR10928 11 231 5.2E-47 T 25-04-2016 IPR007768 Suppressor of fused SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 207 7.2E-74 T 25-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 Pfam PF01081 KDPG and KHG aldolase 10 203 8.7E-68 T 25-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 PANTHER PTHR30246 1 207 2.0E-91 T 25-04-2016 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 25-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 PANTHER PTHR30246:SF0 1 207 2.0E-91 T 25-04-2016 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 SUPERFAMILY SSF51569 9 207 4.03E-65 T 25-04-2016 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 Gene3D G3DSA:3.20.20.70 8 208 8.2E-72 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00255 9b42f99447e823afc978b8fefa4bf8fd 212 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 25-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 SMD_RS16410 15f386e33270b82984d453305240bb72 430 Gene3D G3DSA:3.90.170.10 267 425 1.5E-67 T 25-04-2016 SMD_RS16410 15f386e33270b82984d453305240bb72 430 PANTHER PTHR11846 1 428 1.6E-246 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 209.373 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 25-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 1.0E-174 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 25-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 Gene3D G3DSA:1.10.300.10 104 196 1.1E-34 T 25-04-2016 SMD_RS16410 15f386e33270b82984d453305240bb72 430 Gene3D G3DSA:3.40.440.10 197 266 3.1E-69 T 25-04-2016 SMD_RS16410 15f386e33270b82984d453305240bb72 430 Gene3D G3DSA:3.40.440.10 3 94 3.1E-69 T 25-04-2016 SMD_RS16410 15f386e33270b82984d453305240bb72 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 7.5E-177 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 SMART SM00788 4 424 3.4E-290 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMD_RS16410 15f386e33270b82984d453305240bb72 430 SUPERFAMILY SSF52540 4 429 1.59E-175 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 Gene3D G3DSA:3.30.499.10 23 226 2.1E-62 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 191 204 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 471 484 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 205 220 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 138 151 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 409 420 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 162 170 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 267 280 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 281 294 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PRINTS PR00415 Aconitase family signature 360 374 2.9E-28 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 SUPERFAMILY SSF53732 22 594 1.7E-184 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PANTHER PTHR11670:SF43 728 869 0.0 T 25-04-2016 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PANTHER PTHR11670:SF43 1 684 0.0 T 25-04-2016 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 Pfam PF00330 Aconitase family (aconitate hydratase) 70 540 1.5E-149 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 Gene3D G3DSA:3.20.19.10 612 865 3.1E-64 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 SUPERFAMILY SSF52016 606 865 3.14E-68 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 Gene3D G3DSA:3.40.1060.10 227 360 7.8E-34 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 Gene3D G3DSA:3.30.499.10 361 552 1.0E-54 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 Pfam PF00694 Aconitase C-terminal domain 664 795 3.8E-30 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PANTHER PTHR11670 728 869 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 PANTHER PTHR11670 1 684 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS16485 494c495d83bd5e3580216b4fb233a933 872 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 867 0.0 T 25-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 SMD_RS01330 c303c14c85aefc8dcbefc48d7b1a4b58 469 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 411 3.4E-71 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS01330 c303c14c85aefc8dcbefc48d7b1a4b58 469 PIRSF PIRSF005943 1 469 6.5E-193 T 25-04-2016 IPR016471 Nicotinamide phosphoribosyl transferase SMD_RS01330 c303c14c85aefc8dcbefc48d7b1a4b58 469 SUPERFAMILY SSF51690 141 466 5.3E-50 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS01330 c303c14c85aefc8dcbefc48d7b1a4b58 469 PANTHER PTHR11098 5 467 1.8E-238 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS01330 c303c14c85aefc8dcbefc48d7b1a4b58 469 PANTHER PTHR11098:SF2 5 467 1.8E-238 T 25-04-2016 SMD_RS01330 c303c14c85aefc8dcbefc48d7b1a4b58 469 Gene3D G3DSA:3.20.140.10 132 385 4.2E-7 T 25-04-2016 SMD_RS09655 1883ede68e93aa6d1c12b65436fb543b 129 PANTHER PTHR33751 34 129 3.4E-17 T 25-04-2016 SMD_RS09655 1883ede68e93aa6d1c12b65436fb543b 129 Gene3D G3DSA:1.10.760.10 38 128 1.8E-19 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS09655 1883ede68e93aa6d1c12b65436fb543b 129 Pfam PF00034 Cytochrome c 54 129 5.9E-7 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS09655 1883ede68e93aa6d1c12b65436fb543b 129 SUPERFAMILY SSF46626 37 127 3.3E-17 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Pfam PF13426 PAS domain 168 283 2.0E-12 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SUPERFAMILY SSF55785 29 146 1.34E-20 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Gene3D G3DSA:3.30.450.20 420 538 8.3E-9 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Gene3D G3DSA:3.30.450.20 144 282 2.4E-27 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 PANTHER PTHR24423 708 719 5.6E-32 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 PANTHER PTHR24423 280 409 5.6E-32 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 PANTHER PTHR24423 17 138 5.6E-32 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 148 3.3E-12 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 290 8.7E-18 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 294 418 1.6E-26 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Pfam PF08447 PAS fold 320 403 4.8E-15 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Pfam PF08447 PAS fold 47 136 4.8E-19 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Gene3D G3DSA:3.30.70.270 555 713 1.1E-51 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Gene3D G3DSA:3.30.450.20 14 143 5.0E-30 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Gene3D G3DSA:3.30.450.20 286 409 1.2E-27 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SUPERFAMILY SSF55073 558 712 9.42E-46 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00267 542 713 1.1E-60 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00091 296 362 7.3E-12 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00091 155 223 3.4E-8 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00091 423 490 13.0 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00091 24 93 6.4E-4 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 551 712 7.2E-43 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 PANTHER PTHR24423:SF383 708 719 5.6E-32 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 PANTHER PTHR24423:SF383 280 409 5.6E-32 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 PANTHER PTHR24423:SF383 17 138 5.6E-32 T 25-04-2016 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Pfam PF08448 PAS fold 429 543 2.7E-7 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SUPERFAMILY SSF55785 140 282 6.41E-24 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SUPERFAMILY SSF55785 281 409 1.15E-28 T 25-04-2016 IPR000014 PAS domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 Pfam PF00990 Diguanylate cyclase, GGDEF domain 553 709 8.4E-43 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00086 242 284 1.5E-5 T 25-04-2016 IPR001610 PAC motif SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00086 369 411 4.0E-12 T 25-04-2016 IPR001610 PAC motif SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SMART SM00086 100 143 1.7E-4 T 25-04-2016 IPR001610 PAC motif SMD_RS13595 ac7ce7fd01560bac70284026750814a0 729 SUPERFAMILY SSF55785 408 538 5.41E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS18275 baed2f8d2c4359aef53f04f5f3434fe7 192 PANTHER PTHR11670:SF27 1 192 7.6E-74 T 25-04-2016 SMD_RS18275 baed2f8d2c4359aef53f04f5f3434fe7 192 SUPERFAMILY SSF52016 3 177 2.16E-51 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS18275 baed2f8d2c4359aef53f04f5f3434fe7 192 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 177 2.8E-56 T 25-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18275 baed2f8d2c4359aef53f04f5f3434fe7 192 Gene3D G3DSA:3.20.19.10 6 184 1.5E-40 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS18275 baed2f8d2c4359aef53f04f5f3434fe7 192 PANTHER PTHR11670 1 192 7.6E-74 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18275 baed2f8d2c4359aef53f04f5f3434fe7 192 Pfam PF00694 Aconitase C-terminal domain 1 123 7.8E-26 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Gene3D G3DSA:1.10.8.10 2 54 4.3E-26 T 25-04-2016 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 SUPERFAMILY SSF54713 55 144 2.13E-20 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Gene3D G3DSA:3.30.479.20 56 145 2.1E-15 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Gene3D G3DSA:1.10.286.20 193 236 9.4E-11 T 25-04-2016 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 SUPERFAMILY SSF46934 2 55 1.94E-17 T 25-04-2016 IPR009060 UBA-like GO:0005515 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 SUPERFAMILY SSF54713 149 290 5.76E-38 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 PANTHER PTHR11741 1 291 7.5E-112 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Pfam PF00889 Elongation factor TS 70 272 2.1E-58 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 69.592 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 290 1.3E-91 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Gene3D G3DSA:3.30.479.20 237 271 6.5E-19 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMD_RS07015 24085184bf9b8c588111469019ecac3c 291 Gene3D G3DSA:3.30.479.20 150 186 6.5E-19 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 Pfam PF12833 Helix-turn-helix domain 24 102 1.4E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 SUPERFAMILY SSF55136 127 273 1.22E-25 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 PANTHER PTHR11019 10 109 5.4E-25 T 25-04-2016 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 Gene3D G3DSA:3.20.80.10 127 271 1.4E-19 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 Pfam PF06445 GyrI-like small molecule binding domain 127 270 8.9E-17 T 25-04-2016 IPR029442 GyrI-like small molecule binding domain SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 SUPERFAMILY SSF46689 54 104 4.26E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 SUPERFAMILY SSF46689 6 52 4.48E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 Gene3D G3DSA:1.10.10.60 6 54 1.4E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 SMART SM00871 125 271 1.5E-16 T 25-04-2016 IPR010499 Bacterial transcription activator, effector binding SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 SMART SM00342 18 101 4.7E-25 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 97 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS20690 c27c2d09439ac09db4e569ecd9a72766 275 Gene3D G3DSA:1.10.10.60 55 104 2.2E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 SUPERFAMILY SSF53850 93 299 6.33E-44 T 25-04-2016 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 PANTHER PTHR30537 1 297 2.2E-115 T 25-04-2016 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 Gene3D G3DSA:1.10.10.10 7 88 5.8E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.6E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.6E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.6E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 PANTHER PTHR30537:SF1 1 297 2.2E-115 T 25-04-2016 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 Gene3D G3DSA:3.40.190.10 165 265 3.7E-23 T 25-04-2016 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 Pfam PF03466 LysR substrate binding domain 93 296 1.2E-42 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.6E-19 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS21915 e564a65d71636ba88a859f2997379a23 300 SUPERFAMILY SSF46785 7 115 1.04E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 PANTHER PTHR22925 30 183 3.1E-96 T 25-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 PANTHER PTHR22925 203 342 3.1E-96 T 25-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 Pfam PF04616 Glycosyl hydrolases family 43 96 336 2.5E-25 T 25-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 SUPERFAMILY SSF75005 27 343 1.96E-55 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 PANTHER PTHR22925:SF30 30 183 3.1E-96 T 25-04-2016 SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 PANTHER PTHR22925:SF30 203 342 3.1E-96 T 25-04-2016 SMD_RS11720 582fe77a3af5086fb6a37a07cf35ae08 345 Gene3D G3DSA:2.115.10.20 20 338 9.4E-69 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 SUPERFAMILY SSF55031 201 314 1.57E-31 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 PIRSF PIRSF005962 20 404 8.4E-124 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 Pfam PF07687 Peptidase dimerisation domain 202 299 3.8E-13 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 Gene3D G3DSA:3.40.630.10 316 403 9.9E-99 T 25-04-2016 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 Gene3D G3DSA:3.40.630.10 15 196 9.9E-99 T 25-04-2016 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 Gene3D G3DSA:3.30.70.360 199 315 1.1E-39 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 SUPERFAMILY SSF53187 22 215 7.78E-87 T 25-04-2016 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 SUPERFAMILY SSF53187 316 403 7.78E-87 T 25-04-2016 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 33 387 1.7E-108 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 Pfam PF01546 Peptidase family M20/M25/M40 91 398 2.3E-33 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 PANTHER PTHR11014 33 405 1.0E-148 T 25-04-2016 SMD_RS10010 48e209241067d0b1322768fe2622bce7 406 PANTHER PTHR11014:SF63 33 405 1.0E-148 T 25-04-2016 SMD_RS04475 032244331ed6cceae1aed5530a483846 179 SUPERFAMILY SSF48317 15 176 2.22E-35 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS04475 032244331ed6cceae1aed5530a483846 179 SMART SM00014 63 172 5.5E-14 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS04475 032244331ed6cceae1aed5530a483846 179 Pfam PF01569 PAP2 superfamily 67 175 9.8E-20 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS04475 032244331ed6cceae1aed5530a483846 179 Gene3D G3DSA:1.20.144.10 9 174 2.9E-38 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS04475 032244331ed6cceae1aed5530a483846 179 PANTHER PTHR14969 25 178 1.4E-28 T 25-04-2016 SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 SUPERFAMILY SSF51735 286 550 2.07E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 Pfam PF13727 CoA-binding domain 69 243 4.7E-18 T 25-04-2016 SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 Gene3D G3DSA:3.90.25.10 468 548 1.6E-7 T 25-04-2016 SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 Gene3D G3DSA:3.40.50.720 287 467 1.1E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 PANTHER PTHR10366 287 553 6.2E-98 T 25-04-2016 SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 Gene3D G3DSA:3.40.50.720 140 239 5.0E-13 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 SUPERFAMILY SSF51735 148 276 3.46E-14 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 PANTHER PTHR10366:SF256 287 553 6.2E-98 T 25-04-2016 SMD_RS09735 97bff15c5c7845c600e5fcea25c9e5bf 637 Pfam PF02719 Polysaccharide biosynthesis protein 288 570 7.0E-111 T 25-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 SMART SM00448 1 112 1.3E-32 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 Gene3D G3DSA:3.40.50.2300 1 123 5.4E-36 T 25-04-2016 SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.3E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 PANTHER PTHR26402:SF518 1 220 2.7E-109 T 25-04-2016 SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 Pfam PF00072 Response regulator receiver domain 4 111 2.6E-24 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 PANTHER PTHR26402 1 220 2.7E-109 T 25-04-2016 SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 SUPERFAMILY SSF52172 1 176 4.7E-37 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 Gene3D G3DSA:1.10.10.10 124 220 3.0E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18395 b02cd5c719742b6b7bea60cebe000cbe 229 SMART SM00862 145 218 1.3E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 29 167 4.7E-19 T 25-04-2016 IPR000160 GGDEF domain SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 SUPERFAMILY SSF141868 185 432 3.53E-81 T 25-04-2016 IPR001633 EAL domain SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 Gene3D G3DSA:3.40.50.2300 445 570 4.0E-26 T 25-04-2016 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 SUPERFAMILY SSF55073 25 167 1.02E-28 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 PANTHER PTHR33121 182 455 7.6E-71 T 25-04-2016 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 SMART SM00267 18 168 5.7E-12 T 25-04-2016 IPR000160 GGDEF domain SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 Gene3D G3DSA:3.20.20.450 183 429 2.4E-85 T 25-04-2016 IPR001633 EAL domain SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 PANTHER PTHR33121:SF13 182 455 7.6E-71 T 25-04-2016 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 Gene3D G3DSA:3.30.70.270 24 168 6.3E-31 T 25-04-2016 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 SMART SM00448 446 558 3.3E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 Pfam PF00072 Response regulator receiver domain 449 558 1.5E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 Pfam PF00563 EAL domain 184 419 1.5E-70 T 25-04-2016 IPR001633 EAL domain SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 SUPERFAMILY SSF52172 445 570 1.57E-27 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 SMART SM00052 178 424 1.1E-95 T 25-04-2016 IPR001633 EAL domain SMD_RS10995 956b874add83b24dd92847cd91e28f35 590 Pfam PF00990 Diguanylate cyclase, GGDEF domain 25 163 9.5E-23 T 25-04-2016 IPR000160 GGDEF domain SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 SMART SM00842 11 180 0.0047 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 SUPERFAMILY SSF53067 11 176 1.48E-9 T 25-04-2016 SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 PANTHER PTHR32432:SF3 1 351 4.6E-98 T 25-04-2016 SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 Gene3D G3DSA:3.30.420.40 194 313 1.5E-27 T 25-04-2016 SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 PANTHER PTHR32432 1 351 4.6E-98 T 25-04-2016 SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 351 6.7E-142 T 25-04-2016 IPR005883 Type IV pilus assembly protein PilM SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 1.8E-135 T 25-04-2016 IPR005883 Type IV pilus assembly protein PilM SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 SUPERFAMILY SSF53067 190 350 1.3E-25 T 25-04-2016 SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 PIRSF PIRSF019169 1 352 3.9E-129 T 25-04-2016 IPR005883 Type IV pilus assembly protein PilM SMD_RS17795 a40f1d7223bafaaef009e7578a67e77c 352 Gene3D G3DSA:3.30.420.40 8 105 9.4E-6 T 25-04-2016 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 Gene3D G3DSA:2.30.40.10 3 74 7.5E-14 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 PANTHER PTHR22642 52 395 1.5E-138 T 25-04-2016 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 399 41.169 T 25-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 SUPERFAMILY SSF51556 62 359 5.5E-86 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 Gene3D G3DSA:3.20.20.140 75 344 1.5E-45 T 25-04-2016 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 Pfam PF01979 Amidohydrolase family 60 376 6.7E-16 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 PANTHER PTHR22642:SF1 52 395 1.5E-138 T 25-04-2016 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 SUPERFAMILY SSF51338 361 397 1.79E-27 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 SUPERFAMILY SSF51338 3 62 1.79E-27 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 Gene3D G3DSA:2.30.40.10 345 399 2.0E-9 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14050 c704cd7bdb8242bb79ca014b9c83b497 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 397 9.1E-136 T 25-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS20925 6b6fbfd753843d6a2d8968831292879e 176 SUPERFAMILY SSF51161 3 174 9.15E-47 T 25-04-2016 IPR011004 Trimeric LpxA-like SMD_RS20925 6b6fbfd753843d6a2d8968831292879e 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 2.0E-5 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS20925 6b6fbfd753843d6a2d8968831292879e 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 8.3E-5 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS20925 6b6fbfd753843d6a2d8968831292879e 176 PANTHER PTHR13061 3 175 7.9E-72 T 25-04-2016 SMD_RS20925 6b6fbfd753843d6a2d8968831292879e 176 Gene3D G3DSA:2.160.10.10 3 174 3.0E-47 T 25-04-2016 SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 PANTHER PTHR30027:SF3 1 245 2.2E-83 T 25-04-2016 SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 PIRSF PIRSF015601 3 244 6.2E-62 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 15 244 1.5E-60 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 Pfam PF04452 RNA methyltransferase 18 239 1.9E-72 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 SUPERFAMILY SSF88697 4 71 1.99E-16 T 25-04-2016 IPR015947 PUA-like domain SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 SUPERFAMILY SSF75217 74 244 2.49E-49 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 PANTHER PTHR30027 1 245 2.2E-83 T 25-04-2016 SMD_RS16750 24b4fa7923da0d28a03e9c36e3680987 245 Gene3D G3DSA:3.40.1280.10 5 244 4.1E-83 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS21065 8d19c1a9e066de4501d630fac80005f1 236 SMART SM01321 9 124 1.6E-40 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS21065 8d19c1a9e066de4501d630fac80005f1 236 Gene3D G3DSA:3.30.70.1290 8 127 3.3E-12 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS21065 8d19c1a9e066de4501d630fac80005f1 236 Pfam PF01797 Transposase IS200 like 13 124 1.1E-14 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS21065 8d19c1a9e066de4501d630fac80005f1 236 PANTHER PTHR34322 2 227 1.4E-38 T 25-04-2016 SMD_RS21065 8d19c1a9e066de4501d630fac80005f1 236 SUPERFAMILY SSF143422 3 127 8.63E-30 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS21065 8d19c1a9e066de4501d630fac80005f1 236 PANTHER PTHR34322:SF1 2 227 1.4E-38 T 25-04-2016 SMD_RS09050 976f182494016413ee56b256725bc35a 474 Gene3D G3DSA:1.20.1250.20 268 471 2.2E-21 T 25-04-2016 SMD_RS09050 976f182494016413ee56b256725bc35a 474 Gene3D G3DSA:1.20.1250.20 26 212 1.2E-25 T 25-04-2016 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PRINTS PR00171 Sugar transporter signature 400 412 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PRINTS PR00171 Sugar transporter signature 30 40 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PRINTS PR00171 Sugar transporter signature 113 132 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PRINTS PR00171 Sugar transporter signature 281 291 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PRINTS PR00171 Sugar transporter signature 377 398 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PANTHER PTHR23500:SF22 7 473 4.0E-216 T 25-04-2016 SMD_RS09050 976f182494016413ee56b256725bc35a 474 PANTHER PTHR23500 7 473 4.0E-216 T 25-04-2016 SMD_RS09050 976f182494016413ee56b256725bc35a 474 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 13 472 5.2E-110 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS09050 976f182494016413ee56b256725bc35a 474 Pfam PF00083 Sugar (and other) transporter 24 473 5.5E-112 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS09050 976f182494016413ee56b256725bc35a 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 325 342 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS09050 976f182494016413ee56b256725bc35a 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS09050 976f182494016413ee56b256725bc35a 474 SUPERFAMILY SSF103473 19 473 2.35E-68 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 51 1.0E-14 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 Pfam PF13377 Periplasmic binding protein-like domain 181 340 2.8E-39 T 25-04-2016 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 PANTHER PTHR30146 5 340 1.2E-217 T 25-04-2016 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 SUPERFAMILY SSF53822 80 328 3.93E-56 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 PANTHER PTHR30146:SF51 5 340 1.2E-217 T 25-04-2016 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 SUPERFAMILY SSF47413 6 62 1.44E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 Gene3D G3DSA:3.40.50.2300 182 340 5.9E-55 T 25-04-2016 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 SMART SM00354 6 76 1.5E-13 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 Gene3D G3DSA:1.10.260.40 6 55 2.6E-20 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05810 8dd7f682b41f3301843ff2120c23cb1b 343 Gene3D G3DSA:3.40.50.2300 56 181 6.6E-22 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 SMART SM00116 343 390 5.1E-7 T 25-04-2016 IPR000644 CBS domain SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 PANTHER PTHR10314 3 339 2.0E-128 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 PANTHER PTHR10314:SF35 3 339 2.0E-128 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 Gene3D G3DSA:3.10.580.10 341 453 4.5E-17 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 1.4E-64 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 Gene3D G3DSA:3.40.50.1100 42 146 3.0E-37 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 25-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 SUPERFAMILY SSF54631 336 452 3.92E-17 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 Pfam PF00571 CBS domain 342 388 7.6E-6 T 25-04-2016 IPR000644 CBS domain SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 SUPERFAMILY SSF53686 3 321 5.24E-90 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 Gene3D G3DSA:3.40.50.1100 152 317 2.7E-57 T 25-04-2016 SMD_RS02885 3d846ee957a71b8e0463f5f99a61335f 456 Gene3D G3DSA:3.40.50.1100 2 41 2.7E-57 T 25-04-2016 SMD_RS13035 6cfe11d0cd48c4d60fa5ea3a88a3bfcb 346 PIRSF PIRSF000355 1 346 1.6E-113 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMD_RS13035 6cfe11d0cd48c4d60fa5ea3a88a3bfcb 346 Gene3D G3DSA:1.10.620.20 13 315 2.8E-81 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SMD_RS13035 6cfe11d0cd48c4d60fa5ea3a88a3bfcb 346 Pfam PF00268 Ribonucleotide reductase, small chain 31 304 3.1E-66 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMD_RS13035 6cfe11d0cd48c4d60fa5ea3a88a3bfcb 346 PANTHER PTHR23409 32 345 6.7E-92 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMD_RS13035 6cfe11d0cd48c4d60fa5ea3a88a3bfcb 346 SUPERFAMILY SSF47240 22 346 4.47E-87 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 Gene3D G3DSA:4.10.320.10 123 163 6.4E-9 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 PANTHER PTHR23151 3 400 3.2E-230 T 25-04-2016 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 170 397 1.1E-84 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 Pfam PF02817 e3 binding domain 122 153 3.1E-6 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 Pfam PF00364 Biotin-requiring enzyme 4 76 1.6E-19 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 SUPERFAMILY SSF52777 170 398 2.45E-91 T 25-04-2016 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 PANTHER PTHR23151:SF47 3 400 3.2E-230 T 25-04-2016 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 SUPERFAMILY SSF47005 116 158 2.75E-7 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 SUPERFAMILY SSF51230 1 96 2.09E-26 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 399 4.0E-178 T 25-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 Gene3D G3DSA:2.40.50.100 1 95 3.1E-28 T 25-04-2016 SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 Gene3D G3DSA:3.30.559.10 167 397 6.1E-96 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SMD_RS14470 eb60b2530f0cb55d690a38cbc3eab22f 400 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 391 1.1E-95 T 25-04-2016 IPR000523 Magnesium chelatase ChlI domain SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 Gene3D G3DSA:3.30.230.10 6 160 3.4E-26 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 SUPERFAMILY SSF52540 188 495 5.95E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 PANTHER PTHR32039 1 496 1.8E-240 T 25-04-2016 SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 5.1E-182 T 25-04-2016 IPR004482 Mg chelatase-related protein SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 SMART SM00382 208 390 4.9E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 PANTHER PTHR32039:SF7 1 496 1.8E-240 T 25-04-2016 IPR004482 Mg chelatase-related protein SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 1.4E-29 T 25-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 SUPERFAMILY SSF54211 10 165 1.48E-30 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.6E-42 T 25-04-2016 SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 328 4.8E-6 T 25-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 339 351 4.8E-6 T 25-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 207 222 4.8E-6 T 25-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 287 301 4.8E-6 T 25-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SMD_RS20575 38cb94fd6a9a37399ca25b3a1ac888cf 501 Gene3D G3DSA:3.40.50.300 188 385 2.9E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07820 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 PANTHER PTHR41294 2 156 4.5E-37 T 25-04-2016 SMD_RS07820 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 PANTHER PTHR41294:SF1 2 156 4.5E-37 T 25-04-2016 SMD_RS07820 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 SUPERFAMILY SSF54593 2 119 3.89E-20 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS07820 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 Gene3D G3DSA:3.10.180.10 5 114 1.3E-17 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Gene3D G3DSA:3.40.50.20 1 128 2.0E-55 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 SUPERFAMILY SSF51230 584 657 2.49E-19 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Gene3D G3DSA:2.40.50.100 589 658 1.9E-22 T 25-04-2016 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Pfam PF02785 Biotin carboxylase C-terminal domain 336 444 6.0E-38 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Gene3D G3DSA:3.30.1490.20 129 202 1.1E-28 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 SUPERFAMILY SSF56059 83 343 1.94E-69 T 25-04-2016 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Gene3D G3DSA:3.30.470.20 203 446 1.2E-101 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Pfam PF00364 Biotin-requiring enzyme 594 656 1.9E-14 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 SUPERFAMILY SSF51246 331 446 1.31E-38 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 PANTHER PTHR18866 1 658 0.0 T 25-04-2016 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 SUPERFAMILY SSF52440 1 113 4.89E-51 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 5.0E-75 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 SMART SM00878 336 443 2.4E-55 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 614 631 - T 25-04-2016 IPR001882 Biotin-binding site SMD_RS01230 5c95f665f6f6e922339de3302e8fb06f 660 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.4E-46 T 25-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 Gene3D G3DSA:3.40.50.300 2 245 4.1E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 PIRSF PIRSF039085 1 249 1.9E-106 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 Pfam PF00005 ABC transporter 16 174 1.9E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 SMART SM00382 25 222 3.4E-19 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 PANTHER PTHR24220 2 249 1.3E-119 T 25-04-2016 SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 SUPERFAMILY SSF52540 2 244 2.95E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10025 3c1fa426ed4dcb34dda707b6a2ea9d90 249 PANTHER PTHR24220:SF447 2 249 1.3E-119 T 25-04-2016 SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 SUPERFAMILY SSF48024 31 142 2.88E-37 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 Pfam PF00772 DnaB-like helicase N terminal domain 33 134 3.1E-34 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 33 468 1.3E-178 T 25-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 Gene3D G3DSA:1.10.860.10 33 135 1.5E-36 T 25-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 Pfam PF03796 DnaB-like helicase C terminal domain 211 466 1.9E-120 T 25-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 Gene3D G3DSA:3.40.50.300 196 468 2.4E-111 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 SUPERFAMILY SSF52540 209 280 5.21E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 SUPERFAMILY SSF52540 307 459 5.21E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14500 9da14eb7999e6e103c98a620f3103622 476 PANTHER PTHR30153 17 476 2.1E-216 T 25-04-2016 SMD_RS03045 bf67f7e1e9d9476c1ad15240121a3fc7 419 PANTHER PTHR31082 15 414 4.8E-90 T 25-04-2016 SMD_RS03045 bf67f7e1e9d9476c1ad15240121a3fc7 419 Pfam PF12821 Threonine/Serine exporter, ThrE 290 410 9.2E-15 T 25-04-2016 IPR024528 Threonine/Serine exporter, ThrE SMD_RS03045 bf67f7e1e9d9476c1ad15240121a3fc7 419 Pfam PF06738 Putative threonine/serine exporter 21 263 6.8E-54 T 25-04-2016 IPR010619 Putative threonine/serine exporter SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 SMART SM00388 210 274 6.3E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 428 1.8E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 SUPERFAMILY SSF55785 88 158 4.71E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 SMART SM00387 317 429 3.5E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Gene3D G3DSA:3.30.450.20 94 153 5.4E-6 T 25-04-2016 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 PANTHER PTHR24423:SF554 67 434 4.1E-131 T 25-04-2016 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Gene3D G3DSA:1.10.287.130 202 259 1.6E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Pfam PF11808 Domain of unknown function (DUF3329) 8 94 1.5E-20 T 25-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 SUPERFAMILY SSF47384 197 274 1.06E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 SUPERFAMILY SSF55874 263 425 4.06E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 98 425 2.6E-125 T 25-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 273 1.0E-17 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Pfam PF13188 PAS domain 103 151 1.7E-5 T 25-04-2016 IPR000014 PAS domain SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 Gene3D G3DSA:3.30.565.10 260 426 5.7E-41 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 3.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 3.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 3.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 3.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04500 5f49056f2abbd84748fddf85e6414b7e 443 PANTHER PTHR24423 67 434 4.1E-131 T 25-04-2016 SMD_RS16690 0a3fb152367cb0a4f95df6fad92c43b1 466 PANTHER PTHR22935 10 430 2.0E-122 T 25-04-2016 SMD_RS16690 0a3fb152367cb0a4f95df6fad92c43b1 466 Gene3D G3DSA:3.40.710.10 78 405 1.2E-74 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16690 0a3fb152367cb0a4f95df6fad92c43b1 466 SUPERFAMILY SSF56601 79 427 3.38E-75 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16690 0a3fb152367cb0a4f95df6fad92c43b1 466 PANTHER PTHR22935:SF68 10 430 2.0E-122 T 25-04-2016 SMD_RS16690 0a3fb152367cb0a4f95df6fad92c43b1 466 Pfam PF00144 Beta-lactamase 83 407 2.4E-67 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 Gene3D G3DSA:3.40.50.720 4 175 4.3E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 473 66.755 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PIRSF PIRSF000110 1 473 2.5E-154 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 Gene3D G3DSA:3.30.360.10 176 462 5.2E-102 T 25-04-2016 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 6.95E-40 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 6.95E-40 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 6.95E-40 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 6.95E-40 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 6.95E-40 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 176 5.6E-41 T 25-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 4 465 8.6E-133 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 2.5E-93 T 25-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 SUPERFAMILY SSF55347 171 465 1.8E-95 T 25-04-2016 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PANTHER PTHR23429:SF0 8 458 1.9E-150 T 25-04-2016 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 PANTHER PTHR23429 8 458 1.9E-150 T 25-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SMD_RS09135 d4ed688d70822427934f8c53be2993d5 478 SUPERFAMILY SSF51735 4 179 2.76E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SUPERFAMILY SSF55874 245 420 3.54E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Gene3D G3DSA:1.10.287.130 182 250 8.1E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Pfam PF01627 Hpt domain 624 682 4.8E-5 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SMART SM00073 613 711 1.2E-7 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Gene3D G3DSA:3.30.565.10 257 422 3.6E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SUPERFAMILY SSF52172 458 584 3.42E-34 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10600 d106e85858b854e85610868ae180caa5 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 5.4E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 5.4E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 5.4E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 5.4E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 418 4.8E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SUPERFAMILY SSF47384 173 256 4.12E-21 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 PANTHER PTHR24423:SF382 169 614 2.7E-118 T 25-04-2016 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Gene3D G3DSA:1.20.120.160 599 709 9.4E-11 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Pfam PF00512 His Kinase A (phospho-acceptor) domain 190 255 2.2E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SUPERFAMILY SSF47226 599 710 1.31E-15 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 PANTHER PTHR24423 169 614 2.7E-118 T 25-04-2016 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SMART SM00388 190 255 8.3E-24 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Pfam PF00072 Response regulator receiver domain 462 574 2.2E-24 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SMART SM00387 302 419 1.3E-31 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10600 d106e85858b854e85610868ae180caa5 725 SMART SM00448 460 575 1.1E-33 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10600 d106e85858b854e85610868ae180caa5 725 Gene3D G3DSA:3.40.50.2300 458 584 2.2E-35 T 25-04-2016 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 449 37.818 T 25-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 449 6.0E-33 T 25-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 453 5.0E-153 T 25-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 Pfam PF01743 Poly A polymerase head domain 56 182 1.1E-35 T 25-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 SUPERFAMILY SSF81301 27 180 4.03E-39 T 25-04-2016 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 Gene3D G3DSA:3.30.460.10 26 179 4.4E-47 T 25-04-2016 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 272 2.7E-20 T 25-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 SUPERFAMILY SSF81891 183 414 1.31E-44 T 25-04-2016 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 PANTHER PTHR13734:SF47 24 319 5.1E-125 T 25-04-2016 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 PANTHER PTHR13734 24 319 5.1E-125 T 25-04-2016 SMD_RS09060 57b43b487b2163bedc4725a215ca05e0 459 Gene3D G3DSA:1.10.3090.10 180 412 6.7E-42 T 25-04-2016 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 1.4E-47 T 25-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 25-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.2E-17 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.2E-17 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.2E-17 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 SMART SM00411 3 92 1.3E-42 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 Gene3D G3DSA:4.10.520.10 2 92 1.4E-36 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 PANTHER PTHR33175:SF2 2 94 1.0E-51 T 25-04-2016 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 SUPERFAMILY SSF47729 3 92 2.65E-32 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 4.6E-32 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.696 T 25-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SMD_RS15315 0fcee5ea382b9f65957ff6fdabfae813 99 PANTHER PTHR33175 2 94 1.0E-51 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 875 894 2.8E-23 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 540 2.8E-23 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 822 832 2.8E-23 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 691 2.8E-23 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 899 911 2.8E-23 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 115 177 2.62E-9 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 679 685 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 460 480 8.4E-16 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 542 558 8.4E-16 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 561 575 8.4E-16 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 218 227 8.4E-16 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 406 418 8.4E-16 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PANTHER PTHR24093 214 973 2.1E-267 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 214 278 2.62E-10 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PANTHER PTHR24093:SF317 214 973 2.1E-267 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 42 107 1.17E-11 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81665 577 668 8.37E-13 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81665 424 479 8.37E-13 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 425 978 4.1E-180 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:2.70.150.10 425 577 3.5E-25 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 44 109 3.0E-8 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 448 959 1.3E-79 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00702 haloacid dehalogenase-like hydrolase 674 889 6.6E-42 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.1110.10 691 802 8.4E-22 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00122 E1-E2 ATPase 446 668 9.5E-66 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.50.1000 803 944 2.4E-44 T 25-04-2016 IPR023214 HAD-like domain SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.50.1000 650 690 2.4E-44 T 25-04-2016 IPR023214 HAD-like domain SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81653 478 576 2.88E-23 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 407 978 4.4E-121 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF56784 676 695 6.34E-54 T 25-04-2016 IPR023214 HAD-like domain SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF56784 733 975 6.34E-54 T 25-04-2016 IPR023214 HAD-like domain SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 284 354 1.44E-12 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 116 178 2.5E-8 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 215 278 2.4E-7 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 286 351 7.4E-10 T 25-04-2016 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 217 268 1.2E-4 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 117 162 1.4E-6 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 288 344 1.3E-5 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08180 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 46 93 2.0E-5 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 SUPERFAMILY SSF54980 309 398 2.55E-14 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 SUPERFAMILY SSF50447 158 306 5.3E-34 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 SUPERFAMILY SSF52540 3 214 6.58E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 SUPERFAMILY SSF54980 409 522 6.23E-25 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Pfam PF03144 Elongation factor Tu domain 2 226 296 7.0E-11 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 SMART SM00838 406 495 8.1E-4 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Gene3D G3DSA:2.40.30.10 213 310 3.3E-28 T 25-04-2016 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Gene3D G3DSA:3.30.70.870 311 411 1.4E-35 T 25-04-2016 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Pfam PF00679 Elongation factor G C-terminus 407 486 2.6E-22 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.8E-13 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.8E-13 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.8E-13 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.8E-13 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 610 3.7E-277 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Gene3D G3DSA:2.40.50.250 494 588 2.8E-35 T 25-04-2016 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Gene3D G3DSA:3.30.70.240 412 488 7.0E-31 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 146 5.8E-25 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 PANTHER PTHR23115:SF14 4 604 2.3E-280 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 PANTHER PTHR23115 4 604 2.3E-280 T 25-04-2016 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Pfam PF00009 Elongation factor Tu GTP binding domain 5 202 3.3E-53 T 25-04-2016 SMD_RS04330 83af8d1bf5f30f6b3bbd0e95818c23d6 615 Gene3D G3DSA:3.40.50.300 4 212 6.8E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00440 aa663c860398341dc7eb48ab5e12940e 288 SUPERFAMILY SSF52335 151 283 2.08E-30 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS00440 aa663c860398341dc7eb48ab5e12940e 288 Gene3D G3DSA:3.40.50.1380 1 140 2.8E-36 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS00440 aa663c860398341dc7eb48ab5e12940e 288 Gene3D G3DSA:3.40.50.1380 148 284 6.5E-42 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS00440 aa663c860398341dc7eb48ab5e12940e 288 ProSitePatterns PS01335 Methylglyoxal synthase active site. 216 224 - T 25-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 SMD_RS00440 aa663c860398341dc7eb48ab5e12940e 288 PANTHER PTHR30492 144 258 1.6E-18 T 25-04-2016 SMD_RS00440 aa663c860398341dc7eb48ab5e12940e 288 SUPERFAMILY SSF52335 11 136 5.26E-22 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 Gene3D G3DSA:3.40.50.720 162 447 2.3E-87 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 SUPERFAMILY SSF51735 164 451 4.87E-86 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 SUPERFAMILY SSF53223 11 162 1.15E-51 T 25-04-2016 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 Gene3D G3DSA:3.40.50.10750 568 723 3.3E-51 T 25-04-2016 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 SUPERFAMILY SSF53659 428 751 1.19E-88 T 25-04-2016 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 PANTHER PTHR23406 371 452 2.4E-169 T 25-04-2016 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 PANTHER PTHR23406 32 355 2.4E-169 T 25-04-2016 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 8.2E-92 T 25-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 SMART SM01274 19 152 5.1E-77 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 Gene3D G3DSA:3.40.50.10380 10 161 2.8E-51 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 Pfam PF03949 Malic enzyme, NAD binding domain 166 363 1.6E-21 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 PIRSF PIRSF036684 1 756 0.0 T 25-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 SMART SM00919 164 399 6.8E-131 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SMD_RS18360 19c7d08a91558bfe9f3263866a437420 763 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 3.0E-27 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMD_RS00285 dc4b100f55dfb2d1b93bf58c7e7b4df0 339 Pfam PF01987 Mitochondrial biogenesis AIM24 81 298 1.3E-64 T 25-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SMD_RS00285 dc4b100f55dfb2d1b93bf58c7e7b4df0 339 PANTHER PTHR31801 73 337 1.9E-107 T 25-04-2016 SMD_RS00285 dc4b100f55dfb2d1b93bf58c7e7b4df0 339 SUPERFAMILY SSF51219 79 317 3.4E-77 T 25-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain SMD_RS00285 dc4b100f55dfb2d1b93bf58c7e7b4df0 339 PANTHER PTHR31801:SF3 73 337 1.9E-107 T 25-04-2016 SMD_RS00285 dc4b100f55dfb2d1b93bf58c7e7b4df0 339 Gene3D G3DSA:3.60.160.10 77 322 5.5E-98 T 25-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SMD_RS00285 dc4b100f55dfb2d1b93bf58c7e7b4df0 339 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 80 300 7.6E-32 T 25-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 SUPERFAMILY SSF56194 222 351 1.44E-43 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 Gene3D G3DSA:3.30.465.10 89 247 2.7E-48 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 225 349 5.6E-33 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 Pfam PF01565 FAD binding domain 38 158 4.1E-16 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 Gene3D G3DSA:3.90.78.10 248 352 1.0E-39 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 350 2.1E-67 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 PANTHER PTHR21071:SF6 1 353 2.6E-144 T 25-04-2016 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 Gene3D G3DSA:3.30.43.10 19 80 4.0E-17 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 PANTHER PTHR21071 1 353 2.6E-144 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 353 81.096 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS10100 e55db1c0e3cf3a07e31f796789ccfbf7 353 SUPERFAMILY SSF56176 20 205 6.54E-34 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82693 300 356 5.23E-13 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PANTHER PTHR32063:SF24 171 1058 0.0 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PANTHER PTHR32063:SF24 2 145 0.0 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82693 600 691 4.19E-5 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1059 0.0 T 25-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82714 216 297 6.02E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82693 42 128 3.14E-22 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82866 323 530 6.8E-29 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 Gene3D G3DSA:3.30.2090.10 758 843 1.2E-22 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 Gene3D G3DSA:3.30.2090.10 215 297 1.1E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 Pfam PF00873 AcrB/AcrD/AcrF family 5 1058 4.6E-272 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PANTHER PTHR32063 171 1058 0.0 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PANTHER PTHR32063 2 145 0.0 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 Gene3D G3DSA:1.10.3850.10 849 1065 1.9E-50 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 Gene3D G3DSA:1.10.3850.10 306 531 2.7E-42 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82693 181 214 5.23E-13 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.2E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PRINTS PR00702 Acriflavin resistance protein family signature 362 385 1.2E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PRINTS PR00702 Acriflavin resistance protein family signature 586 603 1.2E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 1.2E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 PRINTS PR00702 Acriflavin resistance protein family signature 503 526 1.2E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 Gene3D G3DSA:3.30.70.1430 42 142 7.8E-28 T 25-04-2016 SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82714 758 843 3.14E-20 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS21490 8696be125c8744ee5f4f9870b7f82bf9 1069 SUPERFAMILY SSF82866 843 1065 1.57E-46 T 25-04-2016 SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 SMART SM00060 1540 1615 0.056 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 SMART SM00060 1362 1438 27.0 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 SMART SM00060 1452 1527 70.0 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 655 693 3.0E-5 T 25-04-2016 IPR006530 YD repeat SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 SUPERFAMILY SSF49265 1352 1449 4.0E-6 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 Pfam PF05593 RHS Repeat 654 683 4.5E-7 T 25-04-2016 IPR031325 RHS repeat SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 Pfam PF05593 RHS Repeat 1093 1128 6.8E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 SUPERFAMILY SSF49265 1513 1624 2.66E-10 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS18075 e9a6bbc8bcf007156767e20afb81b8e6 1726 Gene3D G3DSA:2.60.40.10 1537 1628 3.7E-5 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS12075 0f5bc0c59c9a78e88be8b906b621dc69 450 PANTHER PTHR37826:SF1 48 450 8.5E-165 T 25-04-2016 SMD_RS12075 0f5bc0c59c9a78e88be8b906b621dc69 450 PANTHER PTHR37826 48 450 8.5E-165 T 25-04-2016 SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 Gene3D G3DSA:3.40.30.10 22 93 6.9E-20 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 PANTHER PTHR11260:SF285 22 202 1.4E-34 T 25-04-2016 SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 SUPERFAMILY SSF52833 22 88 7.33E-16 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 SUPERFAMILY SSF47616 83 204 1.04E-20 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 Gene3D G3DSA:1.20.1050.10 94 205 1.3E-14 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 20 81 4.5E-11 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS19385 4c8dce06baf3bdf8277b131ecd2c3ed8 213 PANTHER PTHR11260 22 202 1.4E-34 T 25-04-2016 SMD_RS05575 fd9acd6fca62ad098a2afd513889b3cd 202 Gene3D G3DSA:2.60.120.10 18 123 1.0E-40 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS05575 fd9acd6fca62ad098a2afd513889b3cd 202 Pfam PF05962 HutD 18 193 3.5E-47 T 25-04-2016 IPR010282 Uncharacterised protein family HutD/Ves SMD_RS05575 fd9acd6fca62ad098a2afd513889b3cd 202 SUPERFAMILY SSF51182 12 198 8.91E-49 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS05575 fd9acd6fca62ad098a2afd513889b3cd 202 PANTHER PTHR37943:SF1 9 193 3.2E-52 T 25-04-2016 SMD_RS05575 fd9acd6fca62ad098a2afd513889b3cd 202 PANTHER PTHR37943 9 193 3.2E-52 T 25-04-2016 SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 Gene3D G3DSA:3.40.50.720 4 129 1.8E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 PANTHER PTHR22604:SF53 1 346 2.0E-109 T 25-04-2016 SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 120 6.5E-23 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 199 1.3E-11 T 25-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 SUPERFAMILY SSF51735 4 157 6.5E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 Gene3D G3DSA:3.30.360.10 130 342 8.4E-29 T 25-04-2016 SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 PANTHER PTHR22604 1 346 2.0E-109 T 25-04-2016 SMD_RS18795 ac408d0cea889ee86bdd2433014a4ac4 347 SUPERFAMILY SSF55347 130 281 7.68E-23 T 25-04-2016 SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PANTHER PTHR24322:SF554 11 146 1.5E-83 T 25-04-2016 SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 Gene3D G3DSA:3.40.50.720 2 241 5.8E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PANTHER PTHR24322:SF554 164 195 1.5E-83 T 25-04-2016 SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PANTHER PTHR24322 11 146 1.5E-83 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 211 1.9E-32 T 25-04-2016 SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 SUPERFAMILY SSF51735 3 243 3.91E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PANTHER PTHR24322 164 195 1.5E-83 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.7E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.7E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.7E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18060 09885bba4042653d6e6ca2ce0653fb8e 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.7E-16 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 25-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 Pfam PF01165 Ribosomal protein S21 3 56 2.9E-22 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 PANTHER PTHR21109 1 59 2.1E-24 T 25-04-2016 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-24 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS02105 35b943693d9b9050dbf636e6ca69f3cd 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.259 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 180 2.5E-33 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 Gene3D G3DSA:1.10.1740.10 8 120 1.0E-28 T 25-04-2016 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 Pfam PF04545 Sigma-70, region 4 131 180 3.4E-18 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 Gene3D G3DSA:1.10.10.10 123 182 1.5E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 PANTHER PTHR30173:SF29 8 184 1.6E-52 T 25-04-2016 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 PANTHER PTHR30173 8 184 1.6E-52 T 25-04-2016 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 Pfam PF04542 Sigma-70 region 2 27 93 7.4E-14 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 SUPERFAMILY SSF88946 8 108 2.12E-26 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS09535 45a655c3cbe4b8b0b43d82497e61ecf0 184 SUPERFAMILY SSF88659 109 182 1.05E-18 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06085 2e92dc50eaa59ff66d572ba2cd4ac5af 382 Pfam PF07786 Protein of unknown function (DUF1624) 8 234 8.4E-15 T 25-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 SMD_RS06085 2e92dc50eaa59ff66d572ba2cd4ac5af 382 PANTHER PTHR40407 6 382 1.3E-77 T 25-04-2016 SMD_RS19905 0f3ad7e5c49d32c79c247d0a96dd06e6 242 Gene3D G3DSA:3.30.70.1240 106 213 5.5E-29 T 25-04-2016 IPR023389 DOPA-like domain SMD_RS19905 0f3ad7e5c49d32c79c247d0a96dd06e6 242 SUPERFAMILY SSF143410 106 212 1.83E-33 T 25-04-2016 IPR023389 DOPA-like domain SMD_RS19905 0f3ad7e5c49d32c79c247d0a96dd06e6 242 PANTHER PTHR36423 67 241 7.6E-15 T 25-04-2016 SMD_RS19905 0f3ad7e5c49d32c79c247d0a96dd06e6 242 Pfam PF08883 Dopa 4,5-dioxygenase family 115 212 7.3E-24 T 25-04-2016 IPR014980 Dopa 4,5-dioxygenase SMD_RS04975 9ac137dd2817b6bb49fb5e9c5765c96e 348 Gene3D G3DSA:3.40.50.2000 10 150 5.0E-21 T 25-04-2016 SMD_RS04975 9ac137dd2817b6bb49fb5e9c5765c96e 348 PANTHER PTHR30160:SF12 1 345 1.1E-143 T 25-04-2016 SMD_RS04975 9ac137dd2817b6bb49fb5e9c5765c96e 348 PANTHER PTHR30160 1 345 1.1E-143 T 25-04-2016 SMD_RS04975 9ac137dd2817b6bb49fb5e9c5765c96e 348 SUPERFAMILY SSF53756 8 344 7.74E-74 T 25-04-2016 SMD_RS04975 9ac137dd2817b6bb49fb5e9c5765c96e 348 Gene3D G3DSA:3.40.50.2000 166 343 2.9E-41 T 25-04-2016 SMD_RS04975 9ac137dd2817b6bb49fb5e9c5765c96e 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 302 5.9E-45 T 25-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SMD_RS19090 cd7d3bc04fc7ceda61e4a09c7eed51db 433 Pfam PF12704 MacB-like periplasmic core domain 20 218 7.0E-22 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS19090 cd7d3bc04fc7ceda61e4a09c7eed51db 433 PANTHER PTHR30572:SF5 1 226 1.2E-174 T 25-04-2016 SMD_RS19090 cd7d3bc04fc7ceda61e4a09c7eed51db 433 PANTHER PTHR30572:SF5 247 433 1.2E-174 T 25-04-2016 SMD_RS19090 cd7d3bc04fc7ceda61e4a09c7eed51db 433 Pfam PF02687 FtsX-like permease family 312 426 9.9E-16 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS19090 cd7d3bc04fc7ceda61e4a09c7eed51db 433 PANTHER PTHR30572 1 226 1.2E-174 T 25-04-2016 SMD_RS19090 cd7d3bc04fc7ceda61e4a09c7eed51db 433 PANTHER PTHR30572 247 433 1.2E-174 T 25-04-2016 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 Gene3D G3DSA:3.30.300.20 17 107 7.6E-34 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 25-04-2016 IPR018280 Ribosomal protein S3, conserved site SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 4.3E-95 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 Gene3D G3DSA:3.30.1140.32 108 207 5.1E-46 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.188 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 SUPERFAMILY SSF54821 108 206 2.09E-40 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 Pfam PF07650 KH domain 38 111 1.2E-19 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 SMART SM00322 60 125 3.1E-11 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 PANTHER PTHR11760 2 243 1.1E-137 T 25-04-2016 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 SUPERFAMILY SSF54814 2 106 7.33E-38 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 PANTHER PTHR11760:SF19 2 243 1.1E-137 T 25-04-2016 SMD_RS04200 2e64a118c10c4cb6f76ffb93afefadb0 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.3E-40 T 25-04-2016 SMD_RS11110 94624d28c3e558a9c679f9e963d32082 123 PANTHER PTHR34980:SF2 1 123 2.7E-22 T 25-04-2016 SMD_RS11110 94624d28c3e558a9c679f9e963d32082 123 Pfam PF05656 Protein of unknown function (DUF805) 11 120 1.6E-30 T 25-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SMD_RS11110 94624d28c3e558a9c679f9e963d32082 123 PANTHER PTHR34980 1 123 2.7E-22 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 PANTHER PTHR23501:SF7 12 493 1.2E-82 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 PANTHER PTHR23501 12 493 1.2E-82 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 SUPERFAMILY SSF103473 469 494 3.01E-51 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 SUPERFAMILY SSF103473 251 422 3.01E-51 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 SUPERFAMILY SSF103473 7 201 3.01E-51 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 7.3E-7 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 7.3E-7 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 7.3E-7 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 Gene3D G3DSA:1.20.1250.20 268 428 3.4E-13 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 Gene3D G3DSA:1.20.1250.20 474 494 3.4E-13 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 Gene3D G3DSA:1.20.1250.20 16 199 2.2E-23 T 25-04-2016 SMD_RS05285 af9f4b41dd9ff42874d2bdf38d091323 505 Pfam PF07690 Major Facilitator Superfamily 23 411 4.9E-38 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 TIGRFAM TIGR02053 MerA: mercury(II) reductase 101 562 9.7E-188 T 25-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PANTHER PTHR22912:SF29 97 550 1.8E-128 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 134 144 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Pfam PF00403 Heavy-metal-associated domain 6 65 1.2E-10 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 101 419 1.5E-65 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 16 26 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 111 129 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 238 255 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 273 290 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 535 554 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 146 165 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 470 490 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 293 308 1.5E-88 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 438 546 9.8E-29 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.30.390.30 433 550 1.0E-38 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF55008 5 73 6.28E-17 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.30.70.100 5 71 7.2E-21 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PANTHER PTHR22912 97 550 1.8E-128 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 PIRSF PIRSF000350 2 562 4.1E-265 T 25-04-2016 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 100 237 2.7E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 238 428 1.1E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF55424 437 560 3.44E-33 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 318 458 3.81E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 198 290 3.81E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08120 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 101 150 3.81E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 48 97 1.3E-10 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 SUPERFAMILY SSF47741 126 209 5.89E-27 T 25-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 Gene3D G3DSA:3.10.20.30 44 116 3.1E-32 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 PANTHER PTHR11908:SF66 41 206 1.3E-41 T 25-04-2016 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 SUPERFAMILY SSF54292 45 129 1.84E-26 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 PANTHER PTHR11908 41 206 1.3E-41 T 25-04-2016 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 25-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 Pfam PF01799 [2Fe-2S] binding domain 115 202 2.2E-29 T 25-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SMD_RS11505 1af6c523e90a96d96069ca408b3597cb 215 Gene3D G3DSA:1.10.150.120 117 208 1.4E-31 T 25-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SMD_RS18535 d7b277356d956fe1a1dc8b247c1d439d 118 SUPERFAMILY SSF158452 16 112 2.88E-16 T 25-04-2016 IPR023376 YqcC-like domain SMD_RS18535 d7b277356d956fe1a1dc8b247c1d439d 118 Pfam PF04287 tRNA pseudouridine synthase C 20 108 6.2E-10 T 25-04-2016 IPR023376 YqcC-like domain SMD_RS18535 d7b277356d956fe1a1dc8b247c1d439d 118 Gene3D G3DSA:1.20.1440.40 19 110 8.2E-11 T 25-04-2016 IPR023376 YqcC-like domain SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 PIRSF PIRSF006288 10 872 1.2E-275 T 25-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Pfam PF01909 Nucleotidyltransferase domain 71 105 1.4E-5 T 25-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 SUPERFAMILY SSF109604 420 571 2.35E-13 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 PANTHER PTHR13734:SF45 399 687 1.0E-127 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 875 259.567 T 25-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 PANTHER PTHR13734 399 687 1.0E-127 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Pfam PF01966 HD domain 452 559 4.8E-14 T 25-04-2016 IPR006674 HD domain SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Gene3D G3DSA:3.30.460.10 71 161 5.7E-7 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Gene3D G3DSA:1.10.3210.10 421 611 4.8E-24 T 25-04-2016 IPR006674 HD domain SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 SMART SM00471 447 594 3.1E-8 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Pfam PF01842 ACT domain 801 858 2.4E-6 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Gene3D G3DSA:3.30.70.260 799 851 5.0E-11 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 SUPERFAMILY SSF81593 186 318 7.53E-10 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 Pfam PF08335 GlnD PII-uridylyltransferase 179 317 6.8E-32 T 25-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 36 865 5.3E-225 T 25-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 SUPERFAMILY SSF81301 18 174 6.54E-17 T 25-04-2016 SMD_RS07060 b4646a78545186a892a5a343f0a0f226 875 SUPERFAMILY SSF55021 795 858 6.66E-10 T 25-04-2016 SMD_RS14795 f565f4efd4beb64359ac9bc66ec89581 382 Gene3D G3DSA:3.40.640.10 40 268 4.4E-77 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS14795 f565f4efd4beb64359ac9bc66ec89581 382 PANTHER PTHR11751 6 380 1.1E-142 T 25-04-2016 SMD_RS14795 f565f4efd4beb64359ac9bc66ec89581 382 Pfam PF00155 Aminotransferase class I and II 28 379 2.2E-57 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS14795 f565f4efd4beb64359ac9bc66ec89581 382 PANTHER PTHR11751:SF301 6 380 1.1E-142 T 25-04-2016 SMD_RS14795 f565f4efd4beb64359ac9bc66ec89581 382 Gene3D G3DSA:3.90.1150.10 269 380 5.8E-14 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS14795 f565f4efd4beb64359ac9bc66ec89581 382 SUPERFAMILY SSF53383 3 380 4.79E-102 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 PANTHER PTHR10657 18 191 2.7E-136 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 PANTHER PTHR10657 262 552 2.7E-136 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 Gene3D G3DSA:3.10.50.40 281 400 1.4E-41 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 SUPERFAMILY SSF54534 284 384 6.54E-31 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 Pfam PF13623 SurA N-terminal domain 2 158 4.0E-23 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 PANTHER PTHR10657:SF11 18 191 2.7E-136 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 PANTHER PTHR10657:SF11 262 552 2.7E-136 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 SUPERFAMILY SSF109998 222 258 2.04E-15 T 25-04-2016 IPR027304 Trigger factor/SurA domain SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 SUPERFAMILY SSF109998 68 189 2.04E-15 T 25-04-2016 IPR027304 Trigger factor/SurA domain SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 Pfam PF13616 PPIC-type PPIASE domain 282 381 1.1E-29 T 25-04-2016 SMD_RS04640 e5280eedede3d7573e9f92eb4341846d 651 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 25-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PIRSF PIRSF001174 1 786 0.0 T 25-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 582 784 9.7E-94 T 25-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Hamap MF_01973 Lon protease [lon]. 11 784 71.656 T 25-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 TIGRFAM TIGR00763 lon: endopeptidase La 12 783 0.0 T 25-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 SUPERFAMILY SSF88697 10 202 1.79E-46 T 25-04-2016 IPR015947 PUA-like domain SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PANTHER PTHR10046:SF43 10 788 0.0 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 SUPERFAMILY SSF54211 607 782 1.4E-56 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Gene3D G3DSA:3.30.230.10 602 783 1.1E-72 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 SMART SM00382 349 495 1.4E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Gene3D G3DSA:1.10.8.60 502 596 1.9E-32 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 688 696 - T 25-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PANTHER PTHR10046 10 788 0.0 T 25-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 SMART SM00464 10 203 1.2E-69 T 25-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Gene3D G3DSA:3.40.50.300 311 501 6.8E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 SUPERFAMILY SSF52540 316 599 2.09E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 607 623 1.2E-53 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 685 704 1.2E-53 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 1.2E-53 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 738 756 1.2E-53 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 715 734 1.2E-53 T 25-04-2016 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 1.0E-17 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS04605 86d8ac91b63499dd576c770ef13aabae 815 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 3.8E-41 T 25-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 SUPERFAMILY SSF46785 5 67 1.29E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 SMART SM00420 7 59 6.4E-19 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 PANTHER PTHR30363:SF11 1 255 2.8E-79 T 25-04-2016 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 3.9E-6 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 3.9E-6 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 Pfam PF08220 DeoR-like helix-turn-helix domain 7 60 3.3E-18 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 25-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 Gene3D G3DSA:3.40.50.1360 79 216 2.0E-15 T 25-04-2016 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 Pfam PF00455 DeoR C terminal sensor domain 79 233 1.5E-53 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 SUPERFAMILY SSF100950 76 237 5.44E-34 T 25-04-2016 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 PANTHER PTHR30363 1 255 2.8E-79 T 25-04-2016 SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 Gene3D G3DSA:1.10.10.10 3 59 7.4E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20805 d70ef2d3ffbf91445b8f156e8d35979a 258 SMART SM01134 74 235 2.4E-72 T 25-04-2016 SMD_RS14890 ff260b56c5010c834277f2d1b7c9aee3 401 PANTHER PTHR23523:SF2 1 401 1.3E-129 T 25-04-2016 SMD_RS14890 ff260b56c5010c834277f2d1b7c9aee3 401 Gene3D G3DSA:1.20.1250.20 18 200 5.0E-17 T 25-04-2016 SMD_RS14890 ff260b56c5010c834277f2d1b7c9aee3 401 SUPERFAMILY SSF103473 7 396 8.37E-41 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS14890 ff260b56c5010c834277f2d1b7c9aee3 401 PANTHER PTHR23523 1 401 1.3E-129 T 25-04-2016 SMD_RS14890 ff260b56c5010c834277f2d1b7c9aee3 401 Pfam PF07690 Major Facilitator Superfamily 23 359 9.4E-15 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS14890 ff260b56c5010c834277f2d1b7c9aee3 401 Gene3D G3DSA:1.20.1250.20 208 395 4.1E-9 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PIRSF PIRSF004557 12 447 4.4E-116 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 Pfam PF00344 SecY translocase 76 422 3.5E-109 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 1.1E-87 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PANTHER PTHR10906:SF2 18 453 2.7E-211 T 25-04-2016 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 439 27.964 T 25-04-2016 IPR026593 Protein translocase subunit SecY SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 25-04-2016 IPR030659 SecY conserved site SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 SUPERFAMILY SSF103491 15 430 8.5E-122 T 25-04-2016 IPR023201 SecY subunit domain SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 25-04-2016 IPR030659 SecY conserved site SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 PANTHER PTHR10906 18 453 2.7E-211 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 Gene3D G3DSA:1.10.3370.10 15 443 2.8E-155 T 25-04-2016 IPR023201 SecY subunit domain SMD_RS04270 7a5d117eabb8160993f710f39cc66a2a 455 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 435 3.1E-122 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 SMART SM00388 203 269 7.9E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 410 7.8E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 Pfam PF00672 HAMP domain 135 198 7.8E-7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 3.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 409 3.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 3.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 PANTHER PTHR24423 157 412 2.1E-47 T 25-04-2016 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 SMART SM00387 311 412 1.6E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 Gene3D G3DSA:1.10.287.130 196 265 5.6E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 Gene3D G3DSA:3.30.565.10 275 411 1.0E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 266 1.6E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 SUPERFAMILY SSF55874 275 409 1.96E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12875 c58c6b19a08c7f829ca0f86ec411fdd8 413 SUPERFAMILY SSF47384 186 266 3.14E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 Gene3D G3DSA:2.40.170.20 156 611 1.3E-91 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 PANTHER PTHR30069 22 551 1.8E-60 T 25-04-2016 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 149 1.1E-26 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 Pfam PF00593 TonB dependent receptor 389 611 2.6E-34 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 9 612 4.4E-187 T 25-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 Gene3D G3DSA:2.170.130.10 20 155 1.6E-38 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 SUPERFAMILY SSF56935 30 610 2.44E-119 T 25-04-2016 SMD_RS02750 a9bba4c32b48aeee25f409d69da341ab 613 PANTHER PTHR30069:SF10 22 551 1.8E-60 T 25-04-2016 SMD_RS08965 033835194f3b8443c7c79e8650701299 379 PANTHER PTHR23514:SF13 1 377 3.1E-119 T 25-04-2016 SMD_RS08965 033835194f3b8443c7c79e8650701299 379 SUPERFAMILY SSF103473 15 377 3.4E-39 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS08965 033835194f3b8443c7c79e8650701299 379 Gene3D G3DSA:1.20.1250.20 202 367 6.3E-15 T 25-04-2016 SMD_RS08965 033835194f3b8443c7c79e8650701299 379 PANTHER PTHR23514 1 377 3.1E-119 T 25-04-2016 SMD_RS08965 033835194f3b8443c7c79e8650701299 379 Gene3D G3DSA:1.20.1250.20 16 179 1.7E-17 T 25-04-2016 SMD_RS08965 033835194f3b8443c7c79e8650701299 379 Pfam PF07690 Major Facilitator Superfamily 16 231 9.3E-9 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 PANTHER PTHR10357:SF164 9 392 1.6E-92 T 25-04-2016 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 PANTHER PTHR10357:SF164 430 491 1.6E-92 T 25-04-2016 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 Gene3D G3DSA:3.20.20.80 8 102 2.6E-69 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 Gene3D G3DSA:3.20.20.80 176 401 2.6E-69 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 Gene3D G3DSA:3.20.20.80 433 446 2.6E-69 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 Gene3D G3DSA:3.90.400.10 103 168 5.1E-14 T 25-04-2016 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 SMART SM00642 11 409 1.2E-51 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 SUPERFAMILY SSF51445 345 451 4.74E-87 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 SUPERFAMILY SSF51445 8 317 4.74E-87 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 PANTHER PTHR10357 9 392 1.6E-92 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 PANTHER PTHR10357 430 491 1.6E-92 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12115 cf79efa898e0a73de169ebed5f530adf 528 Pfam PF00128 Alpha amylase, catalytic domain 26 248 1.9E-47 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 SUPERFAMILY SSF55811 202 347 1.62E-28 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 Pfam PF00293 NUDIX domain 217 330 1.3E-14 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 Gene3D G3DSA:3.90.79.10 203 346 7.1E-36 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 PANTHER PTHR21342 178 338 7.9E-130 T 25-04-2016 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 PANTHER PTHR21342 1 157 7.9E-130 T 25-04-2016 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 Gene3D G3DSA:3.40.50.620 2 199 1.6E-39 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 PANTHER PTHR21342:SF0 178 338 7.9E-130 T 25-04-2016 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 PANTHER PTHR21342:SF0 1 157 7.9E-130 T 25-04-2016 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 SUPERFAMILY SSF52374 7 178 1.66E-20 T 25-04-2016 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 Pfam PF01467 Cytidylyltransferase-like 7 69 5.0E-9 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMD_RS01335 6a497a414e89bbb51406b587fd7b5e67 349 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 63 3.8E-9 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 Gene3D G3DSA:3.50.50.60 6 177 6.6E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 Gene3D G3DSA:3.50.50.60 271 332 6.6E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 PANTHER PTHR13789:SF174 4 359 9.2E-89 T 25-04-2016 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 Pfam PF01494 FAD binding domain 7 199 1.6E-8 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 Pfam PF01494 FAD binding domain 285 321 3.4E-6 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 PANTHER PTHR13789 4 359 9.2E-89 T 25-04-2016 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 SUPERFAMILY SSF51905 5 172 6.66E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 SUPERFAMILY SSF51905 270 345 6.66E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.1E-16 T 25-04-2016 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.1E-16 T 25-04-2016 SMD_RS09935 7e425ccc23450de6fac0185b6e3d5469 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.1E-16 T 25-04-2016 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 SUPERFAMILY SSF82861 551 634 2.48E-12 T 25-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 Pfam PF00924 Mechanosensitive ion channel 593 791 1.6E-45 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 SUPERFAMILY SSF50182 637 701 1.21E-14 T 25-04-2016 IPR010920 LSM domain SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 Gene3D G3DSA:2.30.30.60 651 699 1.4E-14 T 25-04-2016 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 PANTHER PTHR30347 107 394 3.2E-156 T 25-04-2016 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 PANTHER PTHR30347 411 806 3.2E-156 T 25-04-2016 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 Pfam PF12607 Protein of unknown function (DUF3772) 132 192 7.7E-17 T 25-04-2016 IPR022249 Domain of unknown function DUF3772 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 PANTHER PTHR30347:SF3 107 394 3.2E-156 T 25-04-2016 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 PANTHER PTHR30347:SF3 411 806 3.2E-156 T 25-04-2016 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 SUPERFAMILY SSF82689 704 797 5.49E-12 T 25-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SMD_RS20450 c754714b4c406aa5b2e4ba55dbd453d2 806 Gene3D G3DSA:3.30.70.100 706 790 3.3E-9 T 25-04-2016 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 177.588 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 Gene3D G3DSA:3.40.50.300 22 177 2.9E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 SMART SM00382 53 180 1.0E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 5.8E-145 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 PANTHER PTHR13779 1 335 3.8E-183 T 25-04-2016 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 1.6E-32 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 237 1.5E-117 T 25-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 SUPERFAMILY SSF46785 259 331 7.07E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 SUPERFAMILY SSF52540 22 254 2.47E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 Gene3D G3DSA:1.10.8.60 185 257 4.2E-33 T 25-04-2016 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 Gene3D G3DSA:1.10.10.10 259 330 9.1E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 331 4.0E-34 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SMD_RS17215 5378191bc3a4b8c9587066567fd9ecff 346 PANTHER PTHR13779:SF25 1 335 3.8E-183 T 25-04-2016 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 PANTHER PTHR34378:SF1 15 454 2.3E-254 T 25-04-2016 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 54 357 1.7E-96 T 25-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 PANTHER PTHR34378 15 454 2.3E-254 T 25-04-2016 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 PIRSF PIRSF017901 2 454 1.8E-188 T 25-04-2016 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 1.6E-216 T 25-04-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 SUPERFAMILY SSF55931 308 452 1.57E-70 T 25-04-2016 SMD_RS18590 8e7db717176c01cccae6ebc71e7e4c60 454 SUPERFAMILY SSF55931 26 269 1.57E-70 T 25-04-2016 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 357 2.1E-127 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 Gene3D G3DSA:3.40.50.620 2 207 4.0E-88 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 Gene3D G3DSA:2.40.30.10 280 360 6.0E-32 T 25-04-2016 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 Pfam PF03054 tRNA methyl transferase 5 357 4.9E-128 T 25-04-2016 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 PANTHER PTHR11933:SF10 1 366 1.4E-184 T 25-04-2016 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 Gene3D G3DSA:2.30.30.280 209 278 2.4E-25 T 25-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 37.905 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 PANTHER PTHR11933 1 366 1.4E-184 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMD_RS11030 603a50b181f855ce80e3c2c10cbc4b72 380 SUPERFAMILY SSF52402 3 241 5.07E-50 T 25-04-2016 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 SUPERFAMILY SSF158472 175 225 1.96E-5 T 25-04-2016 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 Gene3D G3DSA:1.10.287.130 217 286 4.3E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 437 2.0E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 SUPERFAMILY SSF47384 210 287 8.04E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 Pfam PF00672 HAMP domain 155 223 5.1E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 Gene3D G3DSA:3.30.565.10 294 438 4.0E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 SMART SM00387 332 438 1.9E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 SMART SM00388 227 292 6.6E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 SMART SM00304 174 226 5.8E-7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 5.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 5.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 5.5E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 SUPERFAMILY SSF55874 293 437 4.06E-31 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PANTHER PTHR24423 38 51 6.7E-47 T 25-04-2016 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PANTHER PTHR24423 168 438 6.7E-47 T 25-04-2016 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PANTHER PTHR24423:SF564 38 51 6.7E-47 T 25-04-2016 SMD_RS02805 6646c450c94bd03cfc843b56b55f375e 448 PANTHER PTHR24423:SF564 168 438 6.7E-47 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:1.20.1640.10 359 567 7.7E-58 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82714 835 920 8.5E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82714 212 277 1.05E-10 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82714 323 339 1.05E-10 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:1.10.3850.10 926 1142 1.0E-61 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:3.30.2090.10 835 918 3.9E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:3.30.2090.10 325 340 1.0E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:3.30.2090.10 212 278 1.0E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82866 920 1142 3.53E-51 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PANTHER PTHR32063 623 1153 0.0 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PANTHER PTHR32063 22 276 0.0 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PANTHER PTHR32063 323 570 0.0 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82693 63 154 8.37E-19 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:3.30.70.1430 691 785 1.6E-6 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PANTHER PTHR32063:SF0 623 1153 0.0 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PANTHER PTHR32063:SF0 22 276 0.0 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PANTHER PTHR32063:SF0 323 570 0.0 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82693 686 783 6.8E-6 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Gene3D G3DSA:3.30.70.1430 63 160 5.1E-25 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PRINTS PR00702 Acriflavin resistance protein family signature 32 56 2.3E-23 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PRINTS PR00702 Acriflavin resistance protein family signature 60 78 2.3E-23 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PRINTS PR00702 Acriflavin resistance protein family signature 537 560 2.3E-23 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 PRINTS PR00702 Acriflavin resistance protein family signature 512 535 2.3E-23 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 SUPERFAMILY SSF82866 364 564 3.53E-45 T 25-04-2016 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Pfam PF00873 AcrB/AcrD/AcrF family 26 280 1.9E-56 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Pfam PF00873 AcrB/AcrD/AcrF family 298 562 9.7E-79 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09665 9ec32adc8601c529b0f0f61840855ecc 1173 Pfam PF00873 AcrB/AcrD/AcrF family 639 1139 4.7E-118 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS07445 74d830389e2088d9aa09a44fd2ac032f 328 SUPERFAMILY SSF52540 117 312 6.97E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07445 74d830389e2088d9aa09a44fd2ac032f 328 PANTHER PTHR30473 3 318 1.2E-169 T 25-04-2016 SMD_RS07445 74d830389e2088d9aa09a44fd2ac032f 328 PANTHER PTHR30473:SF1 3 318 1.2E-169 T 25-04-2016 SMD_RS07445 74d830389e2088d9aa09a44fd2ac032f 328 Gene3D G3DSA:3.40.50.300 112 314 1.8E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07445 74d830389e2088d9aa09a44fd2ac032f 328 Pfam PF02562 PhoH-like protein 112 315 3.4E-91 T 25-04-2016 IPR003714 PhoH-like protein GO:0005524 SMD_RS17410 5ebd8b1e05cdfcdd2a653bf32c8a5124 295 PANTHER PTHR37423 2 293 4.1E-103 T 25-04-2016 SMD_RS17410 5ebd8b1e05cdfcdd2a653bf32c8a5124 295 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 13 260 4.9E-77 T 25-04-2016 IPR017689 Outer membrane protein assembly factor BamD SMD_RS17410 5ebd8b1e05cdfcdd2a653bf32c8a5124 295 Pfam PF13525 Outer membrane lipoprotein 43 247 1.2E-55 T 25-04-2016 SMD_RS17410 5ebd8b1e05cdfcdd2a653bf32c8a5124 295 Gene3D G3DSA:1.25.40.10 44 257 1.4E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS17410 5ebd8b1e05cdfcdd2a653bf32c8a5124 295 SUPERFAMILY SSF48452 44 124 5.0E-10 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS17410 5ebd8b1e05cdfcdd2a653bf32c8a5124 295 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 12 255 42.463 T 25-04-2016 IPR017689 Outer membrane protein assembly factor BamD SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 SUPERFAMILY SSF81464 26 115 3.11E-20 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 Pfam PF06481 COX Aromatic Rich Motif 236 279 4.5E-15 T 25-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 PANTHER PTHR22888 10 264 8.3E-131 T 25-04-2016 SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 236 2.5E-104 T 25-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 Gene3D G3DSA:2.60.40.420 113 276 5.4E-37 T 25-04-2016 IPR008972 Cupredoxin SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 PIRSF PIRSF000292 1 300 4.9E-123 T 25-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 PANTHER PTHR22888:SF13 10 264 8.3E-131 T 25-04-2016 SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 SUPERFAMILY SSF49503 118 277 7.3E-47 T 25-04-2016 IPR008972 Cupredoxin SMD_RS20650 d1844cf526e21f75dbe68113063f32f2 301 Gene3D G3DSA:1.10.287.90 25 111 1.6E-33 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 SMART SM00342 406 490 9.4E-32 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 PANTHER PTHR32071:SF16 126 344 1.2E-36 T 25-04-2016 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 Gene3D G3DSA:1.10.8.60 277 345 3.0E-12 T 25-04-2016 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 SUPERFAMILY SSF46689 442 493 1.93E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 Gene3D G3DSA:1.10.10.60 444 494 1.4E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 459 474 6.9E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 474 490 6.9E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 SUPERFAMILY SSF52540 126 342 3.38E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 Pfam PF14532 Sigma-54 interaction domain 127 275 6.3E-22 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 Gene3D G3DSA:1.10.10.60 389 443 5.3E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 443 486 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 PANTHER PTHR32071 126 344 1.2E-36 T 25-04-2016 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 Gene3D G3DSA:3.40.50.300 126 276 8.3E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 SUPERFAMILY SSF46689 391 436 4.48E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12060 f571ad2ab6980349e9ec38e66c4e20a4 495 Pfam PF12833 Helix-turn-helix domain 412 491 1.4E-23 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:3.40.50.300 370 476 5.3E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:3.40.50.300 130 159 5.3E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:3.40.50.300 24 82 5.3E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:1.10.3170.10 167 368 1.5E-17 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:3.90.320.10 900 1211 7.4E-75 T 25-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Pfam PF00580 UvrD/REP helicase N-terminal domain 23 462 5.1E-54 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 SUPERFAMILY SSF52980 910 1208 2.04E-57 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:1.10.486.10 610 750 2.0E-37 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 SUPERFAMILY SSF52540 345 497 4.75E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 SUPERFAMILY SSF52540 128 211 4.75E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 SUPERFAMILY SSF52540 826 848 4.75E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 SUPERFAMILY SSF52540 572 789 4.75E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 SUPERFAMILY SSF52540 22 80 4.75E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Pfam PF13361 UvrD-like helicase C-terminal domain 703 847 8.7E-16 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Pfam PF13361 UvrD-like helicase C-terminal domain 469 644 2.7E-8 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Pfam PF12705 PD-(D/E)XK nuclease superfamily 975 1155 1.9E-5 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070:SF23 319 516 2.3E-248 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070:SF23 19 89 2.3E-248 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070:SF23 825 1202 2.3E-248 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070:SF23 544 800 2.3E-248 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070:SF23 128 224 2.3E-248 T 25-04-2016 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:3.40.50.300 751 851 2.0E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Gene3D G3DSA:3.40.50.300 477 607 2.0E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 12 1207 12.673 T 25-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070 319 516 2.3E-248 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070 19 89 2.3E-248 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070 825 1202 2.3E-248 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070 544 800 2.3E-248 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 PANTHER PTHR11070 128 224 2.3E-248 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21835 5a62adf440e4aa0d16b6e77781b14ad6 1225 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 19 1206 2.3E-218 T 25-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 Gene3D G3DSA:3.40.50.880 13 225 1.9E-48 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 Pfam PF01965 DJ-1/PfpI family 72 180 5.3E-17 T 25-04-2016 IPR002818 DJ-1/PfpI SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 SUPERFAMILY SSF46689 272 322 1.4E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 PANTHER PTHR11019 13 326 1.6E-97 T 25-04-2016 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 Gene3D G3DSA:1.10.10.60 226 272 4.5E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 PANTHER PTHR11019:SF68 13 326 1.6E-97 T 25-04-2016 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 SUPERFAMILY SSF46689 219 269 1.18E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 SMART SM00342 235 318 4.2E-25 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 Gene3D G3DSA:1.10.10.60 273 322 6.5E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 Pfam PF12833 Helix-turn-helix domain 241 319 9.2E-21 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS09980 c7dcf403c9fc616ff9568165450ec07e 333 SUPERFAMILY SSF52317 13 201 6.88E-45 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09625 52e228bcd909e2e0863a367ad628651d 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 12 173 1.2E-62 T 25-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMD_RS09625 52e228bcd909e2e0863a367ad628651d 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 10 178 34.841 T 25-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMD_RS09625 52e228bcd909e2e0863a367ad628651d 178 Gene3D G3DSA:3.40.50.2020 11 173 7.2E-64 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS09625 52e228bcd909e2e0863a367ad628651d 178 PANTHER PTHR32315 10 174 8.3E-76 T 25-04-2016 SMD_RS09625 52e228bcd909e2e0863a367ad628651d 178 Pfam PF00156 Phosphoribosyl transferase domain 43 158 5.5E-21 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMD_RS09625 52e228bcd909e2e0863a367ad628651d 178 SUPERFAMILY SSF53271 11 167 8.65E-49 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS16380 1f8b7c219a3b829d90e77b55d45eb9d2 233 SUPERFAMILY SSF53474 7 229 3.76E-24 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16380 1f8b7c219a3b829d90e77b55d45eb9d2 233 Gene3D G3DSA:3.40.50.1820 7 230 2.0E-21 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16380 1f8b7c219a3b829d90e77b55d45eb9d2 233 Pfam PF12146 Serine aminopeptidase, S33 46 193 3.3E-8 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 SUPERFAMILY SSF52172 14 134 3.56E-21 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 Pfam PF00072 Response regulator receiver domain 143 264 2.2E-15 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 Pfam PF00072 Response regulator receiver domain 16 129 6.4E-11 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 Gene3D G3DSA:3.40.50.2300 141 270 5.5E-24 T 25-04-2016 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 SMART SM00448 141 264 3.1E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 SMART SM00448 14 129 2.0E-7 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 Gene3D G3DSA:3.40.50.2300 12 136 8.7E-20 T 25-04-2016 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 SUPERFAMILY SSF52172 139 275 8.68E-24 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 PANTHER PTHR26402 141 269 3.4E-22 T 25-04-2016 SMD_RS20015 a3447a3470e8125dbc50fe76d40f0a14 280 PANTHER PTHR26402:SF292 141 269 3.4E-22 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 SMART SM00382 92 372 6.1E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Pfam PF04408 Helicase associated domain (HA2) 469 538 6.0E-16 T 25-04-2016 IPR007502 Helicase-associated domain GO:0004386 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 SMART SM00490 306 406 1.8E-14 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 PANTHER PTHR18934 76 610 0.0 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 PANTHER PTHR18934 805 933 0.0 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 PANTHER PTHR18934 678 775 0.0 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Pfam PF00271 Helicase conserved C-terminal domain 286 405 1.6E-10 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 18 616 2.1E-275 T 25-04-2016 IPR010222 RNA helicase HrpA GO:0004004 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 SMART SM00847 466 556 1.9E-31 T 25-04-2016 IPR007502 Helicase-associated domain GO:0004386 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Pfam PF00270 DEAD/DEAH box helicase 85 233 6.3E-8 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 624 764 2.0E-19 T 25-04-2016 IPR011709 Domain of unknown function DUF1605 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 SMART SM00487 59 259 1.8E-29 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 PANTHER PTHR18934:SF109 76 610 0.0 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 PANTHER PTHR18934:SF109 805 933 0.0 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 PANTHER PTHR18934:SF109 678 775 0.0 T 25-04-2016 SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Gene3D G3DSA:3.40.50.300 277 418 1.7E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Pfam PF11898 Domain of unknown function (DUF3418) 779 1355 1.1E-175 T 25-04-2016 IPR024590 RNA helicase HrpA, C-terminal SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 SUPERFAMILY SSF52540 76 591 2.04E-100 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16840 503d0b8da4a90c1466b45cf0e6da1114 1360 Gene3D G3DSA:3.40.50.300 76 234 1.2E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 SMART SM00829 14 325 5.0E-7 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 PANTHER PTHR11695:SF13 17 328 5.1E-140 T 25-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 PANTHER PTHR11695 17 328 5.1E-140 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 SUPERFAMILY SSF50129 3 146 2.59E-42 T 25-04-2016 IPR011032 GroES-like SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 8.8E-6 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 SUPERFAMILY SSF51735 118 289 1.9E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 Gene3D G3DSA:3.40.50.720 127 295 5.1E-72 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 Pfam PF00107 Zinc-binding dehydrogenase 160 286 3.3E-13 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 Gene3D G3DSA:3.90.180.10 3 88 3.3E-11 T 25-04-2016 IPR011032 GroES-like SMD_RS13950 caa76d96bdfd7b87eae06ccdbe441f2d 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 327 1.8E-133 T 25-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SMD_RS09170 4e1711a54e4c366ebb8bfb797063d084 82 Gene3D G3DSA:1.10.150.250 2 80 2.1E-25 T 25-04-2016 IPR005631 Flavinator of succinate dehydrogenase SMD_RS09170 4e1711a54e4c366ebb8bfb797063d084 82 SUPERFAMILY SSF109910 4 79 1.06E-22 T 25-04-2016 IPR005631 Flavinator of succinate dehydrogenase SMD_RS09170 4e1711a54e4c366ebb8bfb797063d084 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 9.8E-23 T 25-04-2016 IPR005631 Flavinator of succinate dehydrogenase SMD_RS09170 4e1711a54e4c366ebb8bfb797063d084 82 PANTHER PTHR39585:SF1 2 80 6.7E-26 T 25-04-2016 SMD_RS09170 4e1711a54e4c366ebb8bfb797063d084 82 PANTHER PTHR39585 2 80 6.7E-26 T 25-04-2016 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 1.1E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 1.1E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.1E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 1.1E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PANTHER PTHR24423 197 528 2.5E-159 T 25-04-2016 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 SMART SM00387 423 532 2.3E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 Pfam PF13188 PAS domain 205 264 2.3E-5 T 25-04-2016 IPR000014 PAS domain SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 SUPERFAMILY SSF47384 312 379 2.75E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PANTHER PTHR24423 7 19 2.5E-159 T 25-04-2016 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 3.0E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 529 1.2E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 Gene3D G3DSA:1.10.287.130 315 366 7.5E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PANTHER PTHR24423:SF483 197 528 2.5E-159 T 25-04-2016 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 PANTHER PTHR24423:SF483 7 19 2.5E-159 T 25-04-2016 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 Gene3D G3DSA:3.30.565.10 367 529 8.7E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 SUPERFAMILY SSF55874 373 529 1.28E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 Gene3D G3DSA:3.30.450.20 202 236 3.6E-5 T 25-04-2016 SMD_RS17435 3b14097cf35243177813336ac72c6daa 537 SMART SM00388 315 381 2.1E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 PANTHER PTHR24220 1 192 1.5E-89 T 25-04-2016 SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 PANTHER PTHR24220:SF509 1 192 1.5E-89 T 25-04-2016 SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 Pfam PF00005 ABC transporter 1 141 5.5E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 SUPERFAMILY SSF52540 1 194 3.68E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 SMART SM00382 5 187 4.9E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS03665 57ed4c7837de9e7fa887e57dfc3dae8a 200 Gene3D G3DSA:3.40.50.300 1 191 2.1E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 Pfam PF08013 Tagatose 6 phosphate kinase 4 422 3.9E-190 T 25-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 Gene3D G3DSA:1.10.400.20 294 408 3.1E-50 T 25-04-2016 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 PANTHER PTHR32502:SF2 225 434 6.6E-135 T 25-04-2016 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 PANTHER PTHR32502:SF2 12 181 6.6E-135 T 25-04-2016 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 422 1.4E-184 T 25-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 PIRSF PIRSF009264 1 428 1.8E-179 T 25-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 Gene3D G3DSA:3.20.20.70 5 293 9.9E-132 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 SUPERFAMILY SSF51569 4 423 3.66E-158 T 25-04-2016 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 PANTHER PTHR32502 225 434 6.6E-135 T 25-04-2016 SMD_RS20800 77e5c1b676e9794bc149e73e39b69557 444 PANTHER PTHR32502 12 181 6.6E-135 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PANTHER PTHR11412:SF104 652 931 1.7E-68 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PANTHER PTHR11412:SF104 386 636 1.7E-68 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PANTHER PTHR11412:SF104 1615 1620 1.7E-68 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 Pfam PF01835 MG2 domain 380 467 2.8E-20 T 25-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 Pfam PF00207 Alpha-2-macroglobulin family 955 1036 8.1E-8 T 25-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PANTHER PTHR11412 652 931 1.7E-68 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PANTHER PTHR11412 386 636 1.7E-68 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PANTHER PTHR11412 1615 1620 1.7E-68 T 25-04-2016 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 SUPERFAMILY SSF48239 1148 1407 1.26E-30 T 25-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 280 374 3.0E-23 T 25-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 742 884 8.7E-13 T 25-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 SMART SM01359 741 884 1.3E-31 T 25-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 Gene3D G3DSA:1.50.10.20 1150 1407 6.4E-24 T 25-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 SMART SM01360 948 1037 1.4E-24 T 25-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 SMD_RS16460 e8a9ccfcbc0b6358e5df1d0b80bfdbbe 1635 PIRSF PIRSF038980 26 1634 0.0 T 25-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria SMD_RS15510 faeb5ba022c2364cbd6c9b07b90ae03a 381 Pfam PF13439 Glycosyltransferase Family 4 16 160 3.9E-15 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMD_RS15510 faeb5ba022c2364cbd6c9b07b90ae03a 381 SUPERFAMILY SSF53756 6 375 7.27E-71 T 25-04-2016 SMD_RS15510 faeb5ba022c2364cbd6c9b07b90ae03a 381 Gene3D G3DSA:3.40.50.2000 26 115 6.6E-5 T 25-04-2016 SMD_RS15510 faeb5ba022c2364cbd6c9b07b90ae03a 381 Pfam PF00534 Glycosyl transferases group 1 185 348 5.8E-33 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMD_RS15510 faeb5ba022c2364cbd6c9b07b90ae03a 381 PANTHER PTHR12526 1 373 1.1E-53 T 25-04-2016 SMD_RS15510 faeb5ba022c2364cbd6c9b07b90ae03a 381 Gene3D G3DSA:3.40.50.2000 181 348 1.5E-28 T 25-04-2016 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 Gene3D G3DSA:3.30.930.10 2 207 1.3E-88 T 25-04-2016 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 Gene3D G3DSA:3.30.930.10 265 357 1.3E-88 T 25-04-2016 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 PIRSF PIRSF001549 1 457 5.1E-139 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 Pfam PF03129 Anticodon binding domain 367 454 6.2E-14 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 SUPERFAMILY SSF52954 364 455 8.02E-22 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 460 28.542 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 Pfam PF13393 Histidyl-tRNA synthetase 10 348 1.2E-34 T 25-04-2016 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 PANTHER PTHR11476:SF1 2 462 6.9E-208 T 25-04-2016 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 Gene3D G3DSA:3.40.50.800 363 454 1.1E-25 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 446 2.6E-121 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 SUPERFAMILY SSF55681 4 359 1.51E-71 T 25-04-2016 SMD_RS10245 9b1b0c1cff0e1d67c2e2f2d7a92e83b0 465 PANTHER PTHR11476 2 462 6.9E-208 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 PANTHER PTHR32071:SF36 3 388 2.3E-183 T 25-04-2016 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 PANTHER PTHR32071:SF36 411 501 2.3E-183 T 25-04-2016 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 Pfam PF02954 Bacterial regulatory protein, Fis family 451 490 1.6E-12 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 Pfam PF00158 Sigma-54 interaction domain 141 304 3.2E-70 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 Gene3D G3DSA:3.40.50.300 137 310 2.7E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 PANTHER PTHR32071 3 388 2.3E-183 T 25-04-2016 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 Gene3D G3DSA:1.10.10.60 433 493 1.1E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 Pfam PF06490 Flagellar regulatory protein FleQ 5 120 1.5E-19 T 25-04-2016 IPR010518 Flagellar regulatory FleQ SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 Gene3D G3DSA:1.10.8.60 311 386 6.8E-24 T 25-04-2016 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 SUPERFAMILY SSF46689 440 492 1.48E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 SUPERFAMILY SSF46689 350 393 1.48E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 SMART SM00382 158 302 6.8E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 SUPERFAMILY SSF52540 140 379 8.1E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 25-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 25-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 PANTHER PTHR32071 411 501 2.3E-183 T 25-04-2016 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 25-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 473 6.1E-12 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS10860 f1674bc3dd88e2c2b26bafdd5ab4921b 501 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 473 493 6.1E-12 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 PANTHER PTHR30476:SF0 1 160 4.8E-84 T 25-04-2016 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 3.3E-59 T 25-04-2016 IPR007551 Protein of unknown function DUF520 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 Gene3D G3DSA:3.30.70.990 9 93 1.3E-28 T 25-04-2016 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 27.662 T 25-04-2016 IPR007551 Protein of unknown function DUF520 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 PANTHER PTHR30476 1 160 4.8E-84 T 25-04-2016 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 SUPERFAMILY SSF89963 89 160 8.11E-26 T 25-04-2016 IPR007551 Protein of unknown function DUF520 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 SUPERFAMILY SSF89963 2 84 6.02E-28 T 25-04-2016 IPR007551 Protein of unknown function DUF520 SMD_RS19030 036c4170eb827492d5e660172d018b5b 160 Gene3D G3DSA:3.30.70.860 94 160 1.1E-30 T 25-04-2016 SMD_RS06680 16921ed34ef045662c9acc3862a4dcde 285 PANTHER PTHR37426 1 284 3.2E-131 T 25-04-2016 SMD_RS06680 16921ed34ef045662c9acc3862a4dcde 285 PANTHER PTHR37426:SF1 1 284 3.2E-131 T 25-04-2016 SMD_RS06680 16921ed34ef045662c9acc3862a4dcde 285 Gene3D G3DSA:3.40.50.150 1 281 1.9E-96 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS06680 16921ed34ef045662c9acc3862a4dcde 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 271 37.865 T 25-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SMD_RS06680 16921ed34ef045662c9acc3862a4dcde 285 SUPERFAMILY SSF53335 8 280 6.1E-80 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS06680 16921ed34ef045662c9acc3862a4dcde 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 281 1.5E-92 T 25-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 Gene3D G3DSA:3.40.50.300 2 227 1.8E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 PANTHER PTHR24220 5 226 6.2E-116 T 25-04-2016 SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 PANTHER PTHR24220:SF470 5 226 6.2E-116 T 25-04-2016 SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 SMART SM00382 29 216 4.6E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 SUPERFAMILY SSF52540 3 225 3.0E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 216 1.9E-81 T 25-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 SMD_RS20025 f5be404aa6593fc8ac7931d68bdc2017 228 Pfam PF00005 ABC transporter 22 167 8.3E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 Gene3D G3DSA:3.60.20.10 1 195 9.7E-61 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 SUPERFAMILY SSF52402 212 487 7.82E-74 T 25-04-2016 SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 PANTHER PTHR11772:SF11 2 546 8.5E-270 T 25-04-2016 SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 PANTHER PTHR11772 2 546 8.5E-270 T 25-04-2016 SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 375 2.6E-107 T 25-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 SUPERFAMILY SSF56235 1 199 9.44E-55 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 Pfam PF00733 Asparagine synthase 215 371 7.0E-56 T 25-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 Pfam PF13537 Glutamine amidotransferase domain 50 170 1.2E-38 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 Gene3D G3DSA:3.40.50.620 196 519 9.8E-115 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS07090 16577b47384a78d19142a62a79ee0ed4 563 SMART SM01172 53 236 6.4E-4 T 25-04-2016 IPR024286 Domain of unknown function DUF3700 SMD_RS00695 0e1c39424727762771e4fe69aa679401 273 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 68 192 7.6E-24 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS00695 0e1c39424727762771e4fe69aa679401 273 PANTHER PTHR30417 58 269 8.9E-49 T 25-04-2016 SMD_RS00695 0e1c39424727762771e4fe69aa679401 273 SMART SM00644 57 192 4.2E-31 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS00695 0e1c39424727762771e4fe69aa679401 273 Gene3D G3DSA:3.40.80.10 56 210 1.8E-51 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS00695 0e1c39424727762771e4fe69aa679401 273 SUPERFAMILY SSF55846 55 208 7.2E-47 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMD_RS05100 890539b1962952313bb7863d40a427d4 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 95.438 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SMD_RS05100 890539b1962952313bb7863d40a427d4 199 Pfam PF13662 Toprim domain 79 170 1.7E-23 T 25-04-2016 IPR006171 Toprim domain SMD_RS05100 890539b1962952313bb7863d40a427d4 199 PANTHER PTHR30446:SF0 1 199 1.5E-106 T 25-04-2016 SMD_RS05100 890539b1962952313bb7863d40a427d4 199 Pfam PF02132 RecR protein 39 76 7.7E-12 T 25-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SMD_RS05100 890539b1962952313bb7863d40a427d4 199 SUPERFAMILY SSF111304 4 197 7.85E-70 T 25-04-2016 IPR023627 Recombination protein RecR SMD_RS05100 890539b1962952313bb7863d40a427d4 199 SMART SM00493 79 164 8.1E-13 T 25-04-2016 IPR006171 Toprim domain SMD_RS05100 890539b1962952313bb7863d40a427d4 199 PANTHER PTHR30446 1 199 1.5E-106 T 25-04-2016 SMD_RS05100 890539b1962952313bb7863d40a427d4 199 TIGRFAM TIGR00615 recR: recombination protein RecR 4 194 7.7E-72 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 Gene3D G3DSA:1.10.10.60 241 284 1.2E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 PANTHER PTHR11019 42 293 7.1E-36 T 25-04-2016 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 Pfam PF12833 Helix-turn-helix domain 209 286 1.1E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 SUPERFAMILY SSF46689 239 285 1.93E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 188 232 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 281 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 PANTHER PTHR11019:SF77 42 293 7.1E-36 T 25-04-2016 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 Pfam PF12852 Cupin 11 168 3.8E-29 T 25-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 SMART SM00342 203 285 6.1E-25 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 SUPERFAMILY SSF46689 186 237 4.17E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12320 81bc612aeb5f53123b60457fee4c8788 293 Gene3D G3DSA:1.10.10.60 183 240 1.8E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 Gene3D G3DSA:3.40.190.10 95 178 1.4E-30 T 25-04-2016 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 Gene3D G3DSA:1.10.10.10 5 84 2.8E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 SUPERFAMILY SSF53850 88 286 1.24E-36 T 25-04-2016 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 PANTHER PTHR30537 1 286 1.2E-93 T 25-04-2016 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.5E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.5E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.5E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 Pfam PF03466 LysR substrate binding domain 91 286 3.3E-38 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 SUPERFAMILY SSF46785 3 83 6.75E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.0E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 PANTHER PTHR30537:SF26 1 286 1.2E-93 T 25-04-2016 SMD_RS17280 b25467d2197928bc277f6a969ba01867 288 Gene3D G3DSA:3.40.190.10 179 257 1.5E-20 T 25-04-2016 SMD_RS10760 d78d16c529acf43a9fde9ec7f9a415cd 295 PIRSF PIRSF003092 6 292 4.8E-81 T 25-04-2016 IPR025501 ATP binding protein MinD SMD_RS10760 d78d16c529acf43a9fde9ec7f9a415cd 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 221 1.7E-25 T 25-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMD_RS10760 d78d16c529acf43a9fde9ec7f9a415cd 295 SUPERFAMILY SSF52540 27 290 3.45E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10760 d78d16c529acf43a9fde9ec7f9a415cd 295 PANTHER PTHR13696:SF3 5 279 6.3E-120 T 25-04-2016 SMD_RS10760 d78d16c529acf43a9fde9ec7f9a415cd 295 PANTHER PTHR13696 5 279 6.3E-120 T 25-04-2016 SMD_RS10760 d78d16c529acf43a9fde9ec7f9a415cd 295 Gene3D G3DSA:3.40.50.300 27 266 6.6E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 PANTHER PTHR24220 10 253 2.3E-99 T 25-04-2016 SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 Pfam PF00005 ABC transporter 24 171 2.9E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 Gene3D G3DSA:3.40.50.300 4 236 4.7E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 SUPERFAMILY SSF52540 8 234 4.28E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 SMART SM00382 33 248 8.3E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS21845 b01f38c58131ce494d3276e6ea76246e 262 PANTHER PTHR24220:SF368 10 253 2.3E-99 T 25-04-2016 SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 Gene3D G3DSA:3.40.980.10 178 328 1.3E-43 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 Pfam PF00994 Probable molybdopterin binding domain 179 319 3.3E-31 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 SUPERFAMILY SSF53218 178 326 1.15E-38 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 SMART SM00852 179 322 5.4E-25 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 PANTHER PTHR22960 10 154 4.9E-51 T 25-04-2016 SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 316 2.8E-28 T 25-04-2016 IPR001453 MoaB/Mog domain SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 Gene3D G3DSA:3.30.70.640 8 152 7.2E-44 T 25-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 PIRSF PIRSF036594 11 332 9.9E-88 T 25-04-2016 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 UniPathway: UPA00344 SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 PANTHER PTHR22960:SF0 10 154 4.9E-51 T 25-04-2016 SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 Pfam PF01967 MoaC family 11 146 1.4E-36 T 25-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SMD_RS12765 ed83d0737edf89364db1fdd8aa248375 332 SUPERFAMILY SSF55040 9 151 1.27E-42 T 25-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 4.18E-35 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 4.18E-35 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 4.18E-35 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 4.18E-35 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 18 153 3.6E-48 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 Pfam PF02556 Preprotein translocase subunit SecB 16 153 3.7E-53 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 SUPERFAMILY SSF54611 19 158 5.45E-47 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 Gene3D G3DSA:3.10.420.10 15 159 2.1E-54 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 32.073 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 PANTHER PTHR36918:SF1 4 166 3.4E-80 T 25-04-2016 SMD_RS00780 907b9809ae89156f312f42ac897bfd19 172 PANTHER PTHR36918 4 166 3.4E-80 T 25-04-2016 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 PIRSF PIRSF038994 23 370 4.2E-99 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 Pfam PF01979 Amidohydrolase family 46 368 1.2E-17 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 SUPERFAMILY SSF51338 7 14 2.88E-5 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 SUPERFAMILY SSF51338 339 368 2.88E-5 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 39 365 2.0E-68 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 SUPERFAMILY SSF51556 50 338 3.25E-78 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 PANTHER PTHR11113:SF7 41 368 2.1E-111 T 25-04-2016 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 Gene3D G3DSA:3.20.20.140 50 339 2.5E-86 T 25-04-2016 SMD_RS20810 a98f3a88aef72d480e8f0c7ce9e6f5ae 371 PANTHER PTHR11113 41 368 2.1E-111 T 25-04-2016 SMD_RS17350 f8ffb0730bc46ae31a863ed7beb89f24 536 PANTHER PTHR31610 5 522 6.4E-203 T 25-04-2016 SMD_RS16640 b929523065752141b45a6082c89a3630 297 Pfam PF01430 Hsp33 protein 6 274 2.0E-78 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMD_RS16640 b929523065752141b45a6082c89a3630 297 PIRSF PIRSF005261 1 287 2.5E-87 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMD_RS16640 b929523065752141b45a6082c89a3630 297 Gene3D G3DSA:3.90.1280.10 226 283 6.0E-21 T 25-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SMD_RS16640 b929523065752141b45a6082c89a3630 297 SUPERFAMILY SSF64397 5 234 7.59E-58 T 25-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SMD_RS16640 b929523065752141b45a6082c89a3630 297 PANTHER PTHR30111 6 290 2.0E-65 T 25-04-2016 SMD_RS16640 b929523065752141b45a6082c89a3630 297 Gene3D G3DSA:1.10.287.480 181 223 1.2E-12 T 25-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain SMD_RS16640 b929523065752141b45a6082c89a3630 297 PANTHER PTHR30111:SF1 6 290 2.0E-65 T 25-04-2016 SMD_RS16640 b929523065752141b45a6082c89a3630 297 SUPERFAMILY SSF118352 227 283 3.27E-17 T 25-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SMD_RS16640 b929523065752141b45a6082c89a3630 297 Gene3D G3DSA:3.55.30.10 3 178 1.2E-51 T 25-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 Gene3D G3DSA:3.40.50.300 134 319 1.6E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 PANTHER PTHR30258:SF12 24 316 1.4E-87 T 25-04-2016 SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 315 1.7E-122 T 25-04-2016 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 Gene3D G3DSA:3.30.450.90 28 119 3.4E-13 T 25-04-2016 SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 SUPERFAMILY SSF52540 24 292 2.88E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 Pfam PF00437 Type II/IV secretion system protein 27 293 2.1E-77 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS04880 2706237a2d0610372c1765f8a1f670bf 350 PANTHER PTHR30258 24 316 1.4E-87 T 25-04-2016 SMD_RS21975 6f0ff1febafefc1e4cdf5130c9f91390 46 Pfam PF00468 Ribosomal protein L34 3 46 2.1E-25 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21975 6f0ff1febafefc1e4cdf5130c9f91390 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 1.3E-25 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21975 6f0ff1febafefc1e4cdf5130c9f91390 46 PANTHER PTHR14503 1 46 1.4E-23 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21975 6f0ff1febafefc1e4cdf5130c9f91390 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 44 7.0E-12 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21975 6f0ff1febafefc1e4cdf5130c9f91390 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 25-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21975 6f0ff1febafefc1e4cdf5130c9f91390 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.287 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Pfam PF00512 His Kinase A (phospho-acceptor) domain 517 581 1.4E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SMART SM00387 625 733 2.7E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 730 9.5E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PANTHER PTHR24423 47 63 2.2E-157 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PANTHER PTHR24423 361 493 2.2E-157 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PANTHER PTHR24423 512 879 2.2E-157 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Pfam PF00072 Response regulator receiver domain 761 869 1.4E-14 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Pfam PF02743 Cache domain 42 191 7.4E-12 T 25-04-2016 IPR033479 Double Cache domain 1 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Gene3D G3DSA:3.30.450.20 99 182 3.0E-4 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Gene3D G3DSA:1.10.287.130 508 577 3.9E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SUPERFAMILY SSF47384 501 582 7.46E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SMART SM00448 759 871 6.0E-11 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SUPERFAMILY SSF55785 368 467 1.03E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Gene3D G3DSA:3.30.450.20 359 476 7.0E-14 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Gene3D G3DSA:3.40.50.2300 757 877 1.9E-21 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SUPERFAMILY SSF52172 757 875 8.11E-22 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SMART SM00388 516 581 1.3E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SUPERFAMILY SSF55874 570 731 3.27E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Gene3D G3DSA:3.30.565.10 585 734 2.1E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 730 1.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 711 1.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 1.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 1.9E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PANTHER PTHR24423:SF479 47 63 2.2E-157 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PANTHER PTHR24423:SF479 361 493 2.2E-157 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 PANTHER PTHR24423:SF479 512 879 2.2E-157 T 25-04-2016 SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 SUPERFAMILY SSF103190 86 191 5.1E-14 T 25-04-2016 IPR029151 Periplasmic sensor domain-like SMD_RS18375 117bce78c1028f6b9658deeb66b8f45f 880 Pfam PF12860 PAS fold 369 482 1.7E-41 T 25-04-2016 SMD_RS13010 40098965656befe2a4b8568938036eb2 182 PANTHER PTHR13871 52 147 1.8E-20 T 25-04-2016 SMD_RS13010 40098965656befe2a4b8568938036eb2 182 SUPERFAMILY SSF52833 50 165 1.26E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13010 40098965656befe2a4b8568938036eb2 182 Pfam PF13905 Thioredoxin-like 52 146 6.7E-16 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13010 40098965656befe2a4b8568938036eb2 182 Gene3D G3DSA:3.40.30.10 52 168 1.4E-22 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 SUPERFAMILY SSF52540 76 362 2.31E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 Gene3D G3DSA:3.40.50.300 1 214 2.2E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 PANTHER PTHR24031:SF0 1 477 7.9E-202 T 25-04-2016 SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 25-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 PANTHER PTHR24031 1 477 7.9E-202 T 25-04-2016 SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 SMART SM00487 20 225 3.2E-61 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 Pfam PF00270 DEAD/DEAH box helicase 25 198 1.6E-49 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 Pfam PF00271 Helicase conserved C-terminal domain 235 342 4.3E-27 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 Gene3D G3DSA:3.40.50.300 215 372 8.6E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02840 c9e984441868a8eb04eaba642ed596d9 477 SMART SM00490 261 342 6.2E-30 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS02155 4c0cc097b15739a940c02bb9387b16de 433 PANTHER PTHR11785:SF341 4 429 2.8E-148 T 25-04-2016 SMD_RS02155 4c0cc097b15739a940c02bb9387b16de 433 Pfam PF13520 Amino acid permease 14 404 4.7E-47 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS02155 4c0cc097b15739a940c02bb9387b16de 433 PIRSF PIRSF006060 1 431 6.9E-79 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS02155 4c0cc097b15739a940c02bb9387b16de 433 PANTHER PTHR11785 4 429 2.8E-148 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 PANTHER PTHR23151 1 128 1.3E-203 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 PANTHER PTHR23151 154 201 1.3E-203 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 PANTHER PTHR23151 225 458 1.3E-203 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 SUPERFAMILY SSF51230 4 87 1.05E-22 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 Pfam PF00364 Biotin-requiring enzyme 6 77 6.3E-16 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 Gene3D G3DSA:4.10.320.10 156 201 1.3E-12 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 SUPERFAMILY SSF47005 157 196 7.59E-9 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 254 454 1.1E-47 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 Gene3D G3DSA:2.40.50.100 6 79 6.0E-21 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 Gene3D G3DSA:3.30.559.10 242 455 2.0E-49 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 SUPERFAMILY SSF52777 244 458 2.76E-52 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 Pfam PF02817 e3 binding domain 157 191 2.4E-10 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 PANTHER PTHR23151:SF65 1 128 1.3E-203 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 PANTHER PTHR23151:SF65 154 201 1.3E-203 T 25-04-2016 SMD_RS20410 a16ddb5944cf6cfa4becbc6f41ec15b0 462 PANTHER PTHR23151:SF65 225 458 1.3E-203 T 25-04-2016 SMD_RS06910 ba904eaa5bbdfaecd765dfcfeb6bf674 121 PANTHER PTHR33169 6 117 3.4E-44 T 25-04-2016 SMD_RS06910 ba904eaa5bbdfaecd765dfcfeb6bf674 121 Pfam PF03551 Transcriptional regulator PadR-like family 24 99 9.6E-20 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal SMD_RS06910 ba904eaa5bbdfaecd765dfcfeb6bf674 121 PANTHER PTHR33169:SF12 6 117 3.4E-44 T 25-04-2016 SMD_RS06910 ba904eaa5bbdfaecd765dfcfeb6bf674 121 SUPERFAMILY SSF46785 20 119 1.44E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06910 ba904eaa5bbdfaecd765dfcfeb6bf674 121 Gene3D G3DSA:1.10.10.10 9 119 1.4E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 PANTHER PTHR10196 1 496 1.4E-254 T 25-04-2016 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 Gene3D G3DSA:3.30.420.40 254 494 2.6E-99 T 25-04-2016 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 SUPERFAMILY SSF53067 255 494 3.63E-82 T 25-04-2016 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 PANTHER PTHR10196:SF9 1 496 1.4E-254 T 25-04-2016 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 Gene3D G3DSA:3.30.420.40 2 253 2.5E-105 T 25-04-2016 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 25-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 SUPERFAMILY SSF53067 5 255 1.85E-95 T 25-04-2016 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 25-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 PIRSF PIRSF000538 3 497 1.9E-178 T 25-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 494 7.0E-220 T 25-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 59.187 T 25-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 2.8E-83 T 25-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SMD_RS19210 1b3e41fa0f037b8bee2825c9a93b28eb 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 3.8E-62 T 25-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SMD_RS15860 6b8065ba19bfe7d04b070132d1d0c45d 202 PIRSF PIRSF006305 1 190 1.8E-45 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS15860 6b8065ba19bfe7d04b070132d1d0c45d 202 Pfam PF02545 Maf-like protein 2 185 3.1E-49 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS15860 6b8065ba19bfe7d04b070132d1d0c45d 202 Gene3D G3DSA:3.90.950.10 2 188 2.7E-60 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMD_RS15860 6b8065ba19bfe7d04b070132d1d0c45d 202 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 29.035 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS15860 6b8065ba19bfe7d04b070132d1d0c45d 202 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 4.2E-45 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS15860 6b8065ba19bfe7d04b070132d1d0c45d 202 SUPERFAMILY SSF52972 1 184 3.34E-52 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 1.9E-27 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.0E-30 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 PANTHER PTHR30012 2 406 3.8E-144 T 25-04-2016 SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 3.5E-21 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 3.5E-21 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 3.5E-21 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 3.5E-21 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 25-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SMD_RS03155 f13fc9bc23b6532c93f0bb491701183f 406 PANTHER PTHR30012:SF0 2 406 3.8E-144 T 25-04-2016 SMD_RS07570 03efc51de2fee82246cf503279d9c8a2 171 SUPERFAMILY SSF54523 9 146 2.43E-18 T 25-04-2016 SMD_RS07570 03efc51de2fee82246cf503279d9c8a2 171 Pfam PF13633 Prokaryotic N-terminal methylation site 6 32 3.9E-9 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07570 03efc51de2fee82246cf503279d9c8a2 171 Pfam PF12019 Type II transport protein GspH 46 161 1.7E-9 T 25-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SMD_RS07570 03efc51de2fee82246cf503279d9c8a2 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.4E-9 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07570 03efc51de2fee82246cf503279d9c8a2 171 Gene3D G3DSA:3.30.700.10 9 48 7.6E-6 T 25-04-2016 SMD_RS05460 78b4825b6a8112739297a1c0ed8b5b0f 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 16 187 3.8E-34 T 25-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related SMD_RS05460 78b4825b6a8112739297a1c0ed8b5b0f 191 PANTHER PTHR37481 5 191 5.2E-39 T 25-04-2016 SMD_RS05460 78b4825b6a8112739297a1c0ed8b5b0f 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 11 187 2.4E-39 T 25-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SMD_RS05460 78b4825b6a8112739297a1c0ed8b5b0f 191 PANTHER PTHR37481:SF1 5 191 5.2E-39 T 25-04-2016 SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 SUPERFAMILY SSF103473 9 400 1.7E-58 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 PANTHER PTHR23502:SF19 10 384 4.3E-119 T 25-04-2016 SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 Gene3D G3DSA:1.20.1250.20 214 401 1.9E-10 T 25-04-2016 SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 Gene3D G3DSA:1.20.1250.20 12 195 6.2E-28 T 25-04-2016 SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 Pfam PF07690 Major Facilitator Superfamily 19 355 1.4E-41 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 370 1.1E-68 T 25-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SMD_RS16345 20e04d867dcec42b0325e29056c240b2 408 PANTHER PTHR23502 10 384 4.3E-119 T 25-04-2016 SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 PANTHER PTHR30195 56 924 1.3E-156 T 25-04-2016 SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 PANTHER PTHR30195:SF3 56 924 1.3E-156 T 25-04-2016 SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 Pfam PF04851 Type III restriction enzyme, res subunit 160 312 5.0E-35 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 Gene3D G3DSA:3.40.50.300 157 324 2.4E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 SUPERFAMILY SSF52540 386 528 2.11E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 SUPERFAMILY SSF52540 173 314 2.11E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 122 1.1E-7 T 25-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 Gene3D G3DSA:3.40.50.300 399 525 2.3E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 SMART SM00487 155 339 4.0E-20 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 Pfam PF08463 EcoEI R protein C-terminal 775 925 5.6E-25 T 25-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 SMD_RS09825 a37f7ade1e1a794c7a9e056861b9c933 932 Pfam PF00271 Helicase conserved C-terminal domain 424 524 4.0E-6 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16965 38c8682f23e8f942d2ea732393bccfc2 585 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 67 5.0E-24 T 25-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 SMD_RS16965 38c8682f23e8f942d2ea732393bccfc2 585 Pfam PF03237 Terminase-like family 161 569 4.7E-101 T 25-04-2016 IPR004921 Terminase, large subunit SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 Gene3D G3DSA:3.10.290.10 5 65 4.2E-15 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 SUPERFAMILY SSF55174 4 69 2.94E-10 T 25-04-2016 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 Pfam PF01479 S4 domain 5 43 1.5E-10 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 PANTHER PTHR21600:SF23 5 240 5.8E-102 T 25-04-2016 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 227 1.1E-44 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 Pfam PF00849 RNA pseudouridylate synthase 64 197 2.5E-18 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 SUPERFAMILY SSF55120 48 229 8.46E-39 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 PANTHER PTHR21600 5 240 5.8E-102 T 25-04-2016 SMD_RS04400 fc2c21da43e16746b92f193b9b5525f6 240 SMART SM00363 3 71 5.8E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 PANTHER PTHR32552 9 696 1.1E-270 T 25-04-2016 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 Gene3D G3DSA:2.40.170.20 158 696 3.6E-82 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 Gene3D G3DSA:2.170.130.10 22 157 2.1E-20 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 SUPERFAMILY SSF56935 23 696 8.24E-96 T 25-04-2016 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 156 4.4E-17 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 Pfam PF00593 TonB dependent receptor 445 694 1.7E-26 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS00220 1403b3b98701da8dd13e59f690cfbcd6 697 PANTHER PTHR32552:SF13 9 696 1.1E-270 T 25-04-2016 SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 Pfam PF13499 EF-hand domain pair 110 161 7.4E-8 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 Pfam PF13499 EF-hand domain pair 54 105 2.5E-7 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 ProSitePatterns PS00018 EF-hand calcium-binding domain. 148 160 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 SUPERFAMILY SSF47473 55 162 9.67E-19 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 Pfam PF13202 EF hand 35 48 0.0018 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS06190 d63414d478dfc0499fd33713d0d09c9c 186 Gene3D G3DSA:1.10.238.10 54 162 7.4E-21 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS10480 7efa840863c7f6a0801545ad91b3fe11 262 SUPERFAMILY SSF52096 2 258 2.99E-72 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS10480 7efa840863c7f6a0801545ad91b3fe11 262 Gene3D G3DSA:3.90.226.10 3 195 4.5E-60 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS10480 7efa840863c7f6a0801545ad91b3fe11 262 PANTHER PTHR11941 3 258 4.3E-104 T 25-04-2016 SMD_RS10480 7efa840863c7f6a0801545ad91b3fe11 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 5.2E-50 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS10480 7efa840863c7f6a0801545ad91b3fe11 262 Gene3D G3DSA:1.10.12.10 204 259 1.0E-11 T 25-04-2016 IPR014748 Crontonase, C-terminal SMD_RS10480 7efa840863c7f6a0801545ad91b3fe11 262 PANTHER PTHR11941:SF86 3 258 4.3E-104 T 25-04-2016 SMD_RS19350 4fa9fcbebbf41b641a95d4b5a26438ea 288 Pfam PF05147 Lanthionine synthetase C-like protein 25 258 4.2E-7 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMD_RS19350 4fa9fcbebbf41b641a95d4b5a26438ea 288 SUPERFAMILY SSF158745 14 256 1.44E-17 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Pfam PF00912 Transglycosylase 59 235 1.1E-57 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Pfam PF17092 Penicillin-binding protein OB-like domain 322 418 9.1E-13 T 25-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 SUPERFAMILY SSF56601 268 319 2.33E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 SUPERFAMILY SSF56601 417 604 2.33E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 SUPERFAMILY SSF56601 660 779 2.33E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 SUPERFAMILY SSF56601 216 239 2.33E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Gene3D G3DSA:1.10.3810.10 59 237 1.3E-65 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 PANTHER PTHR32282:SF5 660 769 1.1E-249 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 PANTHER PTHR32282:SF5 416 606 1.1E-249 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 PANTHER PTHR32282:SF5 1 316 1.1E-249 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Gene3D G3DSA:2.40.50.140 352 416 8.1E-7 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 SUPERFAMILY SSF53955 47 264 3.37E-69 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 599 8.4E-22 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Gene3D G3DSA:3.40.710.10 661 782 4.6E-128 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Gene3D G3DSA:3.40.710.10 238 319 4.6E-128 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 Gene3D G3DSA:3.40.710.10 417 607 4.6E-128 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 PANTHER PTHR32282 660 769 1.1E-249 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 PANTHER PTHR32282 416 606 1.1E-249 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 PANTHER PTHR32282 1 316 1.1E-249 T 25-04-2016 SMD_RS17800 6d4ebb56d32d07f17155cc2ad0f8f48f 807 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 754 3.0E-174 T 25-04-2016 SMD_RS04175 2c75e0a1d9e4a7cbe1af2f794c170aa5 201 Gene3D G3DSA:3.40.1370.10 53 201 1.5E-45 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SMD_RS04175 2c75e0a1d9e4a7cbe1af2f794c170aa5 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 198 6.1E-62 T 25-04-2016 IPR013005 50S ribosomal protein uL4 SMD_RS04175 2c75e0a1d9e4a7cbe1af2f794c170aa5 201 SUPERFAMILY SSF52166 10 200 7.72E-61 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SMD_RS04175 2c75e0a1d9e4a7cbe1af2f794c170aa5 201 PANTHER PTHR10746 12 200 1.2E-72 T 25-04-2016 IPR013005 50S ribosomal protein uL4 SMD_RS04175 2c75e0a1d9e4a7cbe1af2f794c170aa5 201 Pfam PF00573 Ribosomal protein L4/L1 family 12 198 1.5E-53 T 25-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SMD_RS04175 2c75e0a1d9e4a7cbe1af2f794c170aa5 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 201 28.718 T 25-04-2016 IPR013005 50S ribosomal protein uL4 SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 PANTHER PTHR33490 14 602 3.6E-107 T 25-04-2016 SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 Gene3D G3DSA:3.90.260.10 304 588 9.4E-48 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 SMART SM00460 402 473 3.2E-20 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 PANTHER PTHR33490:SF4 14 602 3.6E-107 T 25-04-2016 SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 Pfam PF11992 Domain of unknown function (DUF3488) 13 327 2.1E-80 T 25-04-2016 IPR021878 Protein of unknown function DUF3488 SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 SUPERFAMILY SSF54001 276 594 3.08E-60 T 25-04-2016 SMD_RS05115 09fc0be5379acf00ad652a0d5025bdc0 649 Pfam PF01841 Transglutaminase-like superfamily 356 471 2.2E-27 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS07500 8b70a031d17790456723d4021acfe992 211 SUPERFAMILY SSF52833 10 111 9.68E-21 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07500 8b70a031d17790456723d4021acfe992 211 PANTHER PTHR11260:SF44 9 209 1.2E-101 T 25-04-2016 SMD_RS07500 8b70a031d17790456723d4021acfe992 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.5E-12 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS07500 8b70a031d17790456723d4021acfe992 211 Gene3D G3DSA:3.40.30.10 7 100 1.7E-26 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07500 8b70a031d17790456723d4021acfe992 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 193 1.7E-7 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS07500 8b70a031d17790456723d4021acfe992 211 PANTHER PTHR11260 9 209 1.2E-101 T 25-04-2016 SMD_RS07500 8b70a031d17790456723d4021acfe992 211 Gene3D G3DSA:1.20.1050.10 101 206 3.8E-13 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS07500 8b70a031d17790456723d4021acfe992 211 SUPERFAMILY SSF47616 82 206 3.13E-24 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS18025 b62bf370384b840313205822358dd9bc 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 425 1.9E-190 T 25-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 SUPERFAMILY SSF53383 1 425 3.99E-134 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS18025 b62bf370384b840313205822358dd9bc 429 PANTHER PTHR11986:SF5 1 428 3.0E-226 T 25-04-2016 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 106.322 T 25-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 Pfam PF00202 Aminotransferase class-III 35 396 7.5E-81 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 Gene3D G3DSA:3.40.640.10 72 318 6.4E-83 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 PANTHER PTHR11986 1 428 3.0E-226 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 Gene3D G3DSA:3.90.1150.10 2 71 1.2E-44 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS18025 b62bf370384b840313205822358dd9bc 429 Gene3D G3DSA:3.90.1150.10 321 425 1.2E-44 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS05655 66b1f3fd416988977ede09a169465c51 420 PANTHER PTHR30508:SF0 16 415 1.3E-118 T 25-04-2016 SMD_RS05655 66b1f3fd416988977ede09a169465c51 420 PANTHER PTHR30508 16 415 1.3E-118 T 25-04-2016 SMD_RS05655 66b1f3fd416988977ede09a169465c51 420 SUPERFAMILY SSF101960 15 414 7.72E-93 T 25-04-2016 SMD_RS05655 66b1f3fd416988977ede09a169465c51 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 131 406 1.5E-80 T 25-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 SMD_RS05655 66b1f3fd416988977ede09a169465c51 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 390 2.9E-60 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 PANTHER PTHR32552 12 469 7.1E-28 T 25-04-2016 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 PANTHER PTHR32552 488 701 7.1E-28 T 25-04-2016 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 Pfam PF00593 TonB dependent receptor 437 700 1.6E-18 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 161 2.0E-10 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 SUPERFAMILY SSF56935 24 701 1.1E-84 T 25-04-2016 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 Gene3D G3DSA:2.170.130.10 25 164 1.4E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS14075 fccae493a9cef99733f0ded69cbc98eb 702 Gene3D G3DSA:2.40.170.20 165 701 4.4E-62 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 68 152 1.9E-14 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 351 46.777 T 25-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 Gene3D G3DSA:3.30.1330.10 27 174 8.9E-63 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 SUPERFAMILY SSF56042 176 349 1.21E-58 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 SUPERFAMILY SSF55326 12 172 7.48E-52 T 25-04-2016 SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 PANTHER PTHR10520 12 341 1.6E-200 T 25-04-2016 SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 Gene3D G3DSA:3.90.650.10 177 349 1.8E-65 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 341 3.3E-138 T 25-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS05520 9d0d960deca1ac7760d49238d3cb9f7c 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 345 2.7E-38 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS13645 49bfcc8b29d0cbd41fd75c7827d8f0cc 205 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 9 199 1.5E-73 T 25-04-2016 IPR018715 Protein of unknown function DUF2239 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 PANTHER PTHR30055:SF76 15 219 5.0E-42 T 25-04-2016 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 PANTHER PTHR30055 15 219 5.0E-42 T 25-04-2016 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 Gene3D G3DSA:1.10.10.60 22 72 3.5E-21 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 SUPERFAMILY SSF46689 22 103 2.14E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 Gene3D G3DSA:1.10.357.10 73 222 1.3E-34 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 5.8E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 5.8E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 2.3E-16 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18305 a719e1f833865e59a4cf938509401268 226 SUPERFAMILY SSF48498 98 219 3.56E-7 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS18305 a719e1f833865e59a4cf938509401268 226 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 163 217 1.0E-13 T 25-04-2016 SMD_RS09505 56e43525bb18bc58ad46cf1765ad4b28 302 PANTHER PTHR10534 12 279 4.4E-132 T 25-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS09505 56e43525bb18bc58ad46cf1765ad4b28 302 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 24 301 1.1E-52 T 25-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS09505 56e43525bb18bc58ad46cf1765ad4b28 302 PANTHER PTHR10534:SF6 12 279 4.4E-132 T 25-04-2016 SMD_RS09505 56e43525bb18bc58ad46cf1765ad4b28 302 Gene3D G3DSA:3.40.1190.20 24 298 2.3E-66 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS09505 56e43525bb18bc58ad46cf1765ad4b28 302 Pfam PF08543 Phosphomethylpyrimidine kinase 125 276 1.2E-19 T 25-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SMD_RS09505 56e43525bb18bc58ad46cf1765ad4b28 302 SUPERFAMILY SSF53613 25 284 1.53E-57 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS07245 de9717184c29ca5f3058364742611233 322 SUPERFAMILY SSF161098 32 309 2.62E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07245 de9717184c29ca5f3058364742611233 322 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 22 315 3.7E-91 T 25-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SMD_RS07245 de9717184c29ca5f3058364742611233 322 Gene3D G3DSA:1.10.3720.10 25 320 1.5E-37 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07245 de9717184c29ca5f3058364742611233 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 310 5.5E-15 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07245 de9717184c29ca5f3058364742611233 322 PANTHER PTHR30425:SF1 12 322 3.1E-151 T 25-04-2016 SMD_RS07245 de9717184c29ca5f3058364742611233 322 PANTHER PTHR30425 12 322 3.1E-151 T 25-04-2016 SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 SMART SM00967 40 115 3.1E-14 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 Gene3D G3DSA:3.40.1280.10 127 275 2.5E-40 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 Gene3D G3DSA:3.30.1330.30 37 109 3.3E-15 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 41 109 6.4E-14 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 SUPERFAMILY SSF75217 123 275 2.09E-34 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 Pfam PF00588 SpoU rRNA Methylase family 130 269 7.5E-31 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 SUPERFAMILY SSF55315 37 109 1.29E-12 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 PANTHER PTHR12029 37 272 9.0E-98 T 25-04-2016 SMD_RS17595 ac9a74b0f47ef9a205433e146973ba5e 277 PANTHER PTHR12029:SF57 37 272 9.0E-98 T 25-04-2016 SMD_RS15660 d7371b42f274761bbd86563f745e9476 2762 Gene3D G3DSA:2.60.120.260 1846 1993 5.3E-4 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS15660 d7371b42f274761bbd86563f745e9476 2762 Gene3D G3DSA:2.60.120.260 1420 1576 1.3E-8 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS15660 d7371b42f274761bbd86563f745e9476 2762 SUPERFAMILY SSF49785 1426 1574 5.61E-5 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 335 4.9E-141 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 Gene3D G3DSA:2.70.210.12 3 156 7.5E-61 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PIRSF PIRSF002401 1 350 2.7E-137 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 25-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 SUPERFAMILY SSF52540 151 338 7.95E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PANTHER PTHR11702:SF3 1 350 4.1E-166 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 Pfam PF01926 50S ribosome-binding GTPase 161 288 9.2E-25 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 Hamap MF_01454 GTPase Obg [obg]. 2 337 48.163 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 PANTHER PTHR11702 1 350 4.1E-166 T 25-04-2016 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 Gene3D G3DSA:3.40.50.300 160 342 3.6E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 Pfam PF01018 GTP1/OBG 3 158 1.4E-61 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMD_RS06245 1fc4dde04dc03fe01577cb797b291523 350 SUPERFAMILY SSF82051 3 158 8.37E-58 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Pfam PF01068 ATP dependent DNA ligase domain 239 407 1.7E-22 T 25-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Pfam PF04679 ATP dependent DNA ligase C terminal region 426 521 2.6E-14 T 25-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 SUPERFAMILY SSF56091 217 407 2.64E-41 T 25-04-2016 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 158 2.3E-70 T 25-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 237 835 3.0E-171 T 25-04-2016 IPR014143 DNA ligase D SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Gene3D G3DSA:3.30.470.30 251 357 4.8E-23 T 25-04-2016 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 PANTHER PTHR10459:SF70 225 530 5.7E-129 T 25-04-2016 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 228 525 4.8E-80 T 25-04-2016 IPR014146 DNA ligase D, ligase domain SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Gene3D G3DSA:2.40.50.140 411 526 2.1E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 SUPERFAMILY SSF50249 412 528 2.91E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Pfam PF13298 DNA polymerase Ligase (LigD) 35 139 2.8E-35 T 25-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 PANTHER PTHR10459 225 530 5.7E-129 T 25-04-2016 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Gene3D G3DSA:3.30.1490.70 223 250 7.1E-19 T 25-04-2016 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 Gene3D G3DSA:3.30.1490.70 365 407 7.1E-19 T 25-04-2016 SMD_RS11575 c76527d99f1a43c0bffd3a830b6beda2 849 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 564 806 1.2E-90 T 25-04-2016 IPR014145 DNA ligase D, polymerase domain SMD_RS01295 608d918ae137a2fa782ae543ab4357f2 133 Pfam PF03061 Thioesterase superfamily 28 100 6.0E-19 T 25-04-2016 IPR006683 Thioesterase domain SMD_RS01295 608d918ae137a2fa782ae543ab4357f2 133 SUPERFAMILY SSF54637 6 130 8.55E-42 T 25-04-2016 IPR029069 HotDog domain SMD_RS01295 608d918ae137a2fa782ae543ab4357f2 133 PANTHER PTHR11049 4 130 3.2E-69 T 25-04-2016 SMD_RS01295 608d918ae137a2fa782ae543ab4357f2 133 Gene3D G3DSA:3.10.129.10 7 130 6.3E-45 T 25-04-2016 IPR029069 HotDog domain SMD_RS01295 608d918ae137a2fa782ae543ab4357f2 133 PANTHER PTHR11049:SF8 4 130 3.2E-69 T 25-04-2016 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 SUPERFAMILY SSF46785 4 76 3.98E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 2.0E-17 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 PANTHER PTHR11751:SF364 205 224 4.6E-17 T 25-04-2016 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 PANTHER PTHR11751:SF364 11 74 4.6E-17 T 25-04-2016 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 SMART SM00345 13 72 2.0E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 Pfam PF07702 UTRA domain 95 230 1.5E-28 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 SMART SM00866 95 232 4.5E-21 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 SUPERFAMILY SSF64288 60 237 6.75E-34 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 Gene3D G3DSA:1.10.10.10 4 77 2.9E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.2E-6 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.2E-6 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 Gene3D G3DSA:3.40.1410.10 92 227 1.3E-36 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 9 239 3.7E-82 T 25-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 PANTHER PTHR11751 11 74 4.6E-17 T 25-04-2016 SMD_RS14040 26cb24da0b771539c23b851f5e4decd7 242 PANTHER PTHR11751 205 224 4.6E-17 T 25-04-2016 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Pfam PF01820 D-ala D-ala ligase N-terminus 19 103 1.9E-18 T 25-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Gene3D G3DSA:3.40.50.20 19 101 5.8E-24 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 PANTHER PTHR23132 19 317 1.2E-89 T 25-04-2016 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Pfam PF07478 D-ala D-ala ligase C-terminus 121 311 5.1E-54 T 25-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 SUPERFAMILY SSF52440 19 113 5.08E-25 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 256 285 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 18 315 35.191 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Gene3D G3DSA:3.30.470.20 102 120 6.2E-44 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Gene3D G3DSA:3.30.470.20 190 314 6.2E-44 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 19 314 4.7E-101 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 Gene3D G3DSA:3.30.1490.20 124 189 4.8E-22 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 SUPERFAMILY SSF56059 113 314 3.01E-52 T 25-04-2016 SMD_RS03470 20829ad7c4f8e5d3d06d0f83c5f1c33c 320 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 80 91 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Gene3D G3DSA:1.10.150.300 131 200 2.4E-26 T 25-04-2016 IPR023192 TGS-like domain SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PANTHER PTHR23305:SF12 1 363 1.8E-208 T 25-04-2016 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.0E-39 T 25-04-2016 IPR013029 Domain of unknown function DUF933 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 SUPERFAMILY SSF52540 3 301 5.48E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 1.5E-21 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.0E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.0E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.0E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.0E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Gene3D G3DSA:3.40.50.300 4 130 1.3E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Gene3D G3DSA:3.40.50.300 201 266 1.3E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 SUPERFAMILY SSF81271 279 360 6.1E-36 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PIRSF PIRSF006641 1 363 6.2E-155 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.8E-156 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Gene3D G3DSA:3.10.20.30 267 363 4.8E-49 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 PANTHER PTHR23305 1 363 1.8E-208 T 25-04-2016 SMD_RS04035 14630a64a00d4fdb014b95813ee6b5dd 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.661 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Gene3D G3DSA:3.90.640.10 236 298 2.2E-19 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 SMART SM00842 10 197 3.1E-103 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 SUPERFAMILY SSF53067 9 198 1.18E-60 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Gene3D G3DSA:3.30.1490.110 95 157 2.8E-15 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Pfam PF14450 Cell division protein FtsA 11 195 4.9E-11 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Pfam PF14450 Cell division protein FtsA 208 375 4.7E-24 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Gene3D G3DSA:3.30.420.40 299 353 3.0E-33 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Gene3D G3DSA:3.30.420.40 211 235 3.0E-33 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 SUPERFAMILY SSF53067 200 378 2.59E-46 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 PANTHER PTHR32432 1 410 4.1E-169 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 3.2E-160 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Gene3D G3DSA:3.30.420.40 3 83 1.3E-24 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Gene3D G3DSA:3.30.420.40 158 210 1.3E-24 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 PIRSF PIRSF003101 1 411 6.0E-152 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 PANTHER PTHR32432:SF4 1 410 4.1E-169 T 25-04-2016 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.7E-28 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMD_RS03480 b74756f0e6c8c34ae65bb8dbb2503328 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.664 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 6.0E-53 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 6.0E-53 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 6.0E-53 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 143 166 6.0E-53 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 6.0E-53 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 6.0E-53 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PIRSF PIRSF002764 7 231 5.2E-78 T 25-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 Pfam PF03379 CcmB protein 16 228 3.4E-66 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 3.6E-62 T 25-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PANTHER PTHR30070:SF1 11 231 3.5E-61 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14805 8d4219e4010a89e804b49216a1b3a295 231 PANTHER PTHR30070 11 231 3.5E-61 T 25-04-2016 SMD_RS21200 f3c48244c0b54e05286e2a6e30d4e9fc 126 Gene3D G3DSA:3.30.110.70 21 122 9.5E-34 T 25-04-2016 IPR002765 Uncharacterised protein family UPF0145 SMD_RS21200 f3c48244c0b54e05286e2a6e30d4e9fc 126 PANTHER PTHR34068:SF2 19 124 4.9E-26 T 25-04-2016 SMD_RS21200 f3c48244c0b54e05286e2a6e30d4e9fc 126 SUPERFAMILY SSF117782 21 124 1.7E-34 T 25-04-2016 IPR002765 Uncharacterised protein family UPF0145 SMD_RS21200 f3c48244c0b54e05286e2a6e30d4e9fc 126 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 20 122 22.774 T 25-04-2016 IPR002765 Uncharacterised protein family UPF0145 SMD_RS21200 f3c48244c0b54e05286e2a6e30d4e9fc 126 Pfam PF01906 Putative heavy-metal-binding 21 122 4.1E-33 T 25-04-2016 IPR002765 Uncharacterised protein family UPF0145 SMD_RS21200 f3c48244c0b54e05286e2a6e30d4e9fc 126 PANTHER PTHR34068 19 124 4.9E-26 T 25-04-2016 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 Pfam PF02687 FtsX-like permease family 532 645 2.6E-21 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 SUPERFAMILY SSF52540 7 228 3.39E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 Pfam PF12704 MacB-like periplasmic core domain 277 495 1.4E-42 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 Gene3D G3DSA:3.40.50.300 6 227 4.8E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 PANTHER PTHR24220 418 574 2.3E-97 T 25-04-2016 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 PANTHER PTHR24220 9 238 2.3E-97 T 25-04-2016 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 Pfam PF00005 ABC transporter 27 175 4.5E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 SMART SM00382 36 223 1.4E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 PANTHER PTHR24220:SF578 418 574 2.3E-97 T 25-04-2016 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 PANTHER PTHR24220:SF578 9 238 2.3E-97 T 25-04-2016 SMD_RS07185 1b85b034646e47617ad50d5693fd6160 652 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 PANTHER PTHR11986 17 448 3.9E-258 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 Gene3D G3DSA:3.40.640.10 72 349 3.7E-84 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 PANTHER PTHR11986:SF80 17 448 3.9E-258 T 25-04-2016 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 Gene3D G3DSA:3.90.1150.10 351 449 1.1E-41 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 Gene3D G3DSA:3.90.1150.10 19 71 1.1E-41 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 Pfam PF00202 Aminotransferase class-III 28 445 2.7E-113 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS07335 4eb48e7a023a1a6341971ecbbca2e23e 450 SUPERFAMILY SSF53383 20 446 7.86E-123 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS02425 f72ece35f6d1a162fdbd57f448c650c9 94 Pfam PF02583 Metal-sensitive transcriptional repressor 8 89 4.9E-18 T 25-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SMD_RS02425 f72ece35f6d1a162fdbd57f448c650c9 94 PANTHER PTHR33677 1 94 6.7E-19 T 25-04-2016 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 PIRSF PIRSF004692 8 333 2.1E-134 T 25-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 2.8E-111 T 25-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 Pfam PF00571 CBS domain 211 267 4.1E-8 T 25-04-2016 IPR000644 CBS domain SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 Pfam PF00571 CBS domain 278 331 2.9E-9 T 25-04-2016 IPR000644 CBS domain SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 SUPERFAMILY SSF53697 22 330 3.11E-70 T 25-04-2016 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 PANTHER PTHR11911:SF90 184 330 4.0E-44 T 25-04-2016 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 Pfam PF01380 SIS domain 50 181 2.1E-30 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 Gene3D G3DSA:3.10.580.10 201 330 9.4E-43 T 25-04-2016 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 SMART SM00116 219 267 1.2E-4 T 25-04-2016 IPR000644 CBS domain SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 SMART SM00116 284 332 3.3E-4 T 25-04-2016 IPR000644 CBS domain SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 PANTHER PTHR11911 184 330 4.0E-44 T 25-04-2016 SMD_RS05470 43458efe37ab4ea2debc5a257172c61f 333 Gene3D G3DSA:3.40.50.10490 22 200 3.2E-51 T 25-04-2016 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 SUPERFAMILY SSF52172 7 130 2.99E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 SMART SM00862 159 235 8.9E-24 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 SUPERFAMILY SSF46894 136 236 2.1E-24 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 PANTHER PTHR26402 6 235 8.9E-101 T 25-04-2016 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 Pfam PF00072 Response regulator receiver domain 8 121 3.6E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 5.9E-23 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 Gene3D G3DSA:3.40.50.2300 6 127 5.1E-37 T 25-04-2016 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 PANTHER PTHR26402:SF573 6 235 8.9E-101 T 25-04-2016 SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 Gene3D G3DSA:1.10.10.10 142 236 7.2E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06685 43745e240010fdb97b6f1383349cb110 237 SMART SM00448 6 120 9.6E-42 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 SMART SM00825 Beta-ketoacyl synthase 11 394 1.5E-7 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 238 336 3.3E-23 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 SUPERFAMILY SSF53901 207 393 1.52E-45 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 SUPERFAMILY SSF53901 4 232 1.15E-34 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 Gene3D G3DSA:3.40.47.10 80 231 6.4E-28 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 94 232 5.3E-22 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 PANTHER PTHR11712 147 393 3.7E-46 T 25-04-2016 SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 150 166 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site SMD_RS21250 1edc4877ec600355d1968c59426d21f3 394 Gene3D G3DSA:3.40.47.10 244 393 2.4E-46 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 PANTHER PTHR21089:SF3 264 351 2.4E-118 T 25-04-2016 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 PANTHER PTHR21089:SF3 75 248 2.4E-118 T 25-04-2016 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 4.1E-46 T 25-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 PIRSF PIRSF000445 1 415 2.2E-148 T 25-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 2.4E-48 T 25-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 406 1.3E-125 T 25-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 407 1.4E-19 T 25-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 SUPERFAMILY SSF69742 1 150 1.05E-47 T 25-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 PANTHER PTHR21089 264 351 2.4E-118 T 25-04-2016 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 PANTHER PTHR21089 75 248 2.4E-118 T 25-04-2016 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 SUPERFAMILY SSF69075 309 408 6.54E-23 T 25-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 SUPERFAMILY SSF51735 154 306 5.81E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 25-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 Gene3D G3DSA:3.40.50.720 155 302 3.1E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03995 4991a3216226cf268fc01a6830a7bd1a 427 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.575 T 25-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 Pfam PF00266 Aminotransferase class-V 156 360 4.3E-6 T 25-04-2016 IPR000192 Aminotransferase class V domain SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 PIRSF PIRSF038800 3 422 4.9E-154 T 25-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 Hamap MF_01970 Kynureninase [kynU]. 1 422 44.945 T 25-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 Gene3D G3DSA:3.40.640.10 53 262 4.5E-14 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 PANTHER PTHR14084:SF0 3 416 1.0E-198 T 25-04-2016 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 SUPERFAMILY SSF53383 7 420 1.78E-69 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 Gene3D G3DSA:3.90.1150.10 274 420 1.7E-51 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 TIGRFAM TIGR01814 kynureninase: kynureninase 12 421 1.9E-140 T 25-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 SMD_RS14290 dd628fc608addb7f6673590ada3926e6 424 PANTHER PTHR14084 3 416 1.0E-198 T 25-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 SMD_RS15900 dea3edf2d36112db95efefa2a0a90925 136 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 21 123 24.837 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMD_RS15900 dea3edf2d36112db95efefa2a0a90925 136 Pfam PF02410 Ribosomal silencing factor during starvation 29 122 6.5E-28 T 25-04-2016 SMD_RS15900 dea3edf2d36112db95efefa2a0a90925 136 SUPERFAMILY SSF81301 22 126 2.45E-37 T 25-04-2016 SMD_RS15900 dea3edf2d36112db95efefa2a0a90925 136 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 26 122 1.0E-35 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMD_RS15900 dea3edf2d36112db95efefa2a0a90925 136 PANTHER PTHR21043 23 127 4.6E-41 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMD_RS15900 dea3edf2d36112db95efefa2a0a90925 136 Gene3D G3DSA:3.30.460.10 23 123 4.6E-36 T 25-04-2016 SMD_RS00885 ad31a8422020b2e30e94db5614e25fae 377 PANTHER PTHR30203 1 372 3.8E-32 T 25-04-2016 SMD_RS00885 ad31a8422020b2e30e94db5614e25fae 377 Gene3D G3DSA:1.20.1600.10 2 371 5.3E-44 T 25-04-2016 SMD_RS00885 ad31a8422020b2e30e94db5614e25fae 377 Pfam PF02321 Outer membrane efflux protein 199 370 1.3E-25 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS00885 ad31a8422020b2e30e94db5614e25fae 377 Pfam PF02321 Outer membrane efflux protein 1 178 3.5E-14 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS00885 ad31a8422020b2e30e94db5614e25fae 377 SUPERFAMILY SSF56954 2 372 2.09E-55 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 596 2.0E-65 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 617 47.174 T 25-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 PANTHER PTHR30081 315 612 2.0E-192 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 PANTHER PTHR30081 1 172 2.0E-192 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 PANTHER PTHR30081 225 283 2.0E-192 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 602 1.6E-127 T 25-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 PANTHER PTHR30081:SF1 315 612 2.0E-192 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 PANTHER PTHR30081:SF1 1 172 2.0E-192 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 PANTHER PTHR30081:SF1 225 283 2.0E-192 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 Pfam PF02355 Protein export membrane protein 438 606 4.0E-20 T 25-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 Pfam PF07549 SecD/SecF GG Motif 115 140 1.0E-7 T 25-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 Pfam PF13721 SecD export protein N-terminal TM region 2 102 1.0E-28 T 25-04-2016 IPR027398 SecD export protein N-terminal TM domain SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 Gene3D G3DSA:1.20.1640.10 419 614 1.9E-28 T 25-04-2016 SMD_RS09570 14f0fe7d50f9c6a270d3616f677dfa2b 618 SUPERFAMILY SSF82866 413 612 4.71E-39 T 25-04-2016 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 Pfam PF12833 Helix-turn-helix domain 51 129 7.7E-24 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 Gene3D G3DSA:1.10.10.60 82 130 2.2E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 PANTHER PTHR11019:SF105 22 136 8.6E-34 T 25-04-2016 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 SMART SM00342 45 128 3.3E-28 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 112 128 9.9E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 97 112 9.9E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 SUPERFAMILY SSF46689 30 79 7.17E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 82 124 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 PANTHER PTHR11019 22 136 8.6E-34 T 25-04-2016 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 SUPERFAMILY SSF46689 81 130 6.27E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13230 f1fbba1e6a5af5abf41ebc71712a1db0 147 Gene3D G3DSA:1.10.10.60 27 81 1.1E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12380 e89d3e16d31940712300d65d95871e5f 324 PANTHER PTHR30011:SF14 42 299 1.4E-43 T 25-04-2016 SMD_RS12380 e89d3e16d31940712300d65d95871e5f 324 SUPERFAMILY SSF51679 41 306 8.07E-47 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12380 e89d3e16d31940712300d65d95871e5f 324 Gene3D G3DSA:3.20.20.30 9 306 2.9E-52 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12380 e89d3e16d31940712300d65d95871e5f 324 PANTHER PTHR30011 42 299 1.4E-43 T 25-04-2016 SMD_RS12380 e89d3e16d31940712300d65d95871e5f 324 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 6 305 1.8E-101 T 25-04-2016 IPR020020 Luciferase-type oxidoreductase SMD_RS12380 e89d3e16d31940712300d65d95871e5f 324 Pfam PF00296 Luciferase-like monooxygenase 33 229 1.1E-32 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 Pfam PF13672 Protein phosphatase 2C 15 193 3.0E-16 T 25-04-2016 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 SMART SM00331 8 233 1.1E-29 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 PANTHER PTHR13832:SF278 1 232 1.4E-49 T 25-04-2016 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 Gene3D G3DSA:3.60.40.10 2 233 1.8E-65 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 PANTHER PTHR13832 1 232 1.4E-49 T 25-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 SMART SM00332 3 231 1.5E-15 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMD_RS04960 b45d057307b14a4fc84bf6347b3e0bf3 234 SUPERFAMILY SSF81606 2 232 1.44E-63 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 333 7.0E-41 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 539 8.4E-49 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 Gene3D G3DSA:3.40.50.970 355 553 3.7E-74 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 SUPERFAMILY SSF52467 194 358 4.18E-54 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 13 563 1.2E-209 T 25-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 PANTHER PTHR18968 5 565 3.0E-267 T 25-04-2016 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 25-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 SUPERFAMILY SSF52518 373 564 6.77E-67 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 Gene3D G3DSA:3.40.50.1220 191 354 2.5E-57 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 176 2.4E-56 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 PANTHER PTHR18968:SF116 5 565 3.0E-267 T 25-04-2016 SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 Gene3D G3DSA:3.40.50.970 12 178 1.0E-70 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS18245 ef3289bfc896757006d421aa5b24176a 578 SUPERFAMILY SSF52518 6 190 1.08E-59 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 Gene3D G3DSA:2.60.40.200 62 205 3.1E-49 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 193 204 - T 25-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 SUPERFAMILY SSF49329 63 204 4.45E-43 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 69 204 5.3E-43 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 PANTHER PTHR10003 45 204 1.7E-44 T 25-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 138 147 1.6E-5 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 179 205 1.6E-5 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 101 123 1.6E-5 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00735 5b2203a4a00693c8f8d9cefc1df9bdfe 208 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 101 111 - T 25-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 Gene3D G3DSA:1.10.1060.10 131 259 2.6E-50 T 25-04-2016 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 1.1E-83 T 25-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 PANTHER PTHR11921:SF27 11 260 2.0E-197 T 25-04-2016 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 SUPERFAMILY SSF54292 28 129 4.3E-31 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 SUPERFAMILY SSF46548 131 258 1.06E-39 T 25-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 2.5E-9 T 25-04-2016 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 134 6.9E-34 T 25-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 25-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 PANTHER PTHR11921 11 260 2.0E-197 T 25-04-2016 SMD_RS09165 db3d0d80be0eaf564c1187c4aab6623e 261 Gene3D G3DSA:3.10.20.30 25 129 2.9E-44 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS02570 d2672bc12130b9c0788852921919271a 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.2E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS02570 d2672bc12130b9c0788852921919271a 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.2E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS02570 d2672bc12130b9c0788852921919271a 195 PANTHER PTHR30328 3 191 3.8E-48 T 25-04-2016 SMD_RS02570 d2672bc12130b9c0788852921919271a 195 Gene3D G3DSA:1.10.357.10 3 192 1.1E-41 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS02570 d2672bc12130b9c0788852921919271a 195 PANTHER PTHR30328:SF3 3 191 3.8E-48 T 25-04-2016 SMD_RS02570 d2672bc12130b9c0788852921919271a 195 SUPERFAMILY SSF48498 84 192 6.47E-6 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS02570 d2672bc12130b9c0788852921919271a 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.3E-18 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS02570 d2672bc12130b9c0788852921919271a 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 25-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SMD_RS02570 d2672bc12130b9c0788852921919271a 195 SUPERFAMILY SSF46689 2 86 5.99E-22 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 PANTHER PTHR24095:SF123 16 541 4.9E-230 T 25-04-2016 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 Pfam PF00501 AMP-binding enzyme 40 443 5.1E-75 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 528 3.2E-14 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 Gene3D G3DSA:2.30.38.10 363 438 1.0E-21 T 25-04-2016 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 Gene3D G3DSA:3.40.50.980 200 356 3.4E-35 T 25-04-2016 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 Gene3D G3DSA:3.30.300.30 442 542 2.8E-27 T 25-04-2016 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 PANTHER PTHR24095 16 541 4.9E-230 T 25-04-2016 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 SUPERFAMILY SSF56801 13 539 1.96E-134 T 25-04-2016 SMD_RS12940 37d6c8d2fdbc1c3fdbc377705cb4aea4 550 Gene3D G3DSA:3.40.50.980 34 199 4.3E-28 T 25-04-2016 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 Gene3D G3DSA:2.60.410.10 298 388 5.7E-29 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 PANTHER PTHR21581:SF3 8 405 2.6E-114 T 25-04-2016 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 SUPERFAMILY SSF56601 43 298 1.68E-79 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 SMART SM00936 298 388 4.1E-32 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 PANTHER PTHR21581 8 405 2.6E-114 T 25-04-2016 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 52 277 3.1E-78 T 25-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 Gene3D G3DSA:3.40.710.10 44 297 1.8E-94 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 SUPERFAMILY SSF69189 298 390 2.35E-24 T 25-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 298 387 3.8E-24 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 155 2.0E-16 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 80 91 2.0E-16 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMD_RS18840 b75c7126e1e76cd4e0a1748fba17417a 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 165 178 2.0E-16 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMD_RS03020 f8d4927dfb514df24b5242156f255d0d 195 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 12 190 3.9E-35 T 25-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like SMD_RS03020 f8d4927dfb514df24b5242156f255d0d 195 PANTHER PTHR31573:SF1 7 195 2.2E-86 T 25-04-2016 SMD_RS03020 f8d4927dfb514df24b5242156f255d0d 195 SUPERFAMILY SSF51197 6 193 2.33E-63 T 25-04-2016 SMD_RS03020 f8d4927dfb514df24b5242156f255d0d 195 Gene3D G3DSA:2.60.120.590 11 192 1.5E-40 T 25-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like SMD_RS03020 f8d4927dfb514df24b5242156f255d0d 195 PANTHER PTHR31573 7 195 2.2E-86 T 25-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 PANTHER PTHR19278:SF36 1 219 8.2E-111 T 25-04-2016 SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 Gene3D G3DSA:3.40.50.2020 7 214 1.3E-76 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 Pfam PF00156 Phosphoribosyl transferase domain 51 159 3.2E-18 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 PANTHER PTHR19278 1 219 8.2E-111 T 25-04-2016 SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 6.6E-57 T 25-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 32.266 T 25-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS01885 192894fb05637335079c79327d3e7cc1 219 SUPERFAMILY SSF53271 3 201 4.98E-47 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 PANTHER PTHR24220 3 247 4.2E-162 T 25-04-2016 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 PANTHER PTHR24220 276 307 4.2E-162 T 25-04-2016 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 Gene3D G3DSA:3.30.70.260 237 334 7.4E-25 T 25-04-2016 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 Pfam PF09383 NIL domain 262 332 1.8E-19 T 25-04-2016 IPR018449 NIL domain SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 SUPERFAMILY SSF55021 260 333 8.36E-17 T 25-04-2016 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 Pfam PF00005 ABC transporter 21 169 6.1E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 SMART SM00382 30 217 8.9E-19 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 PANTHER PTHR24220:SF455 3 247 4.2E-162 T 25-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 PANTHER PTHR24220:SF455 276 307 4.2E-162 T 25-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 SMART SM00930 260 333 3.2E-25 T 25-04-2016 IPR018449 NIL domain SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 Gene3D G3DSA:3.40.50.300 1 236 1.8E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19020 997af8f00f4e925a9a9c4720cb9184af 335 SUPERFAMILY SSF52540 1 240 4.23E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 SUPERFAMILY SSF52540 21 257 1.56E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 51 376 8.5E-124 T 25-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 Pfam PF08402 TOBE domain 297 376 9.4E-20 T 25-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 Pfam PF00005 ABC transporter 37 178 6.6E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 PANTHER PTHR24220:SF481 22 327 2.8E-179 T 25-04-2016 SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 Gene3D G3DSA:3.40.50.300 19 253 4.4E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 PANTHER PTHR24220 22 327 2.8E-179 T 25-04-2016 SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 SUPERFAMILY SSF50331 253 376 2.79E-18 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMD_RS07395 f27e9be94c62918dc7166b94959a3ce7 378 SMART SM00382 45 233 3.2E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 25-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 SUPERFAMILY SSF52768 6 301 1.6E-87 T 25-04-2016 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PRINTS PR00116 Arginase signature 177 195 5.0E-45 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PRINTS PR00116 Arginase signature 260 274 5.0E-45 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PRINTS PR00116 Arginase signature 225 254 5.0E-45 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PRINTS PR00116 Arginase signature 96 111 5.0E-45 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PRINTS PR00116 Arginase signature 123 150 5.0E-45 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 TIGRFAM TIGR01229 rocF_arginase: arginase 8 302 9.0E-88 T 25-04-2016 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: REACT_13|UniPathway: UPA00158 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PANTHER PTHR11358 6 300 1.5E-108 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 Pfam PF00491 Arginase family 7 298 9.7E-75 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 Gene3D G3DSA:3.40.800.10 5 300 2.3E-86 T 25-04-2016 IPR023696 Ureohydrolase domain SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PIRSF PIRSF036979 2 302 3.4E-32 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS01600 46f6b03cfaaeda80b92e84d6ae76eb87 306 PANTHER PTHR11358:SF2 6 300 1.5E-108 T 25-04-2016 SMD_RS08680 c2e854d88535028d01d1d20da28fbcd5 144 PANTHER PTHR10516 37 144 1.3E-49 T 25-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMD_RS08680 c2e854d88535028d01d1d20da28fbcd5 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 44 140 1.8E-33 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMD_RS08680 c2e854d88535028d01d1d20da28fbcd5 144 SUPERFAMILY SSF54534 36 143 1.57E-38 T 25-04-2016 SMD_RS08680 c2e854d88535028d01d1d20da28fbcd5 144 Gene3D G3DSA:3.10.50.40 37 143 7.8E-43 T 25-04-2016 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 PANTHER PTHR10283:SF43 358 615 4.3E-210 T 25-04-2016 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 PANTHER PTHR10283:SF43 1 218 4.3E-210 T 25-04-2016 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 SUPERFAMILY SSF116726 240 313 2.88E-9 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 Pfam PF02080 TrkA-C domain 338 393 7.6E-9 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 Pfam PF02080 TrkA-C domain 246 313 5.6E-8 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 Pfam PF03600 Citrate transporter 23 563 4.4E-38 T 25-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 Gene3D G3DSA:3.30.70.1450 245 318 1.6E-10 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 Gene3D G3DSA:3.30.70.1450 335 414 3.5E-18 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 SUPERFAMILY SSF116726 330 414 2.22E-15 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 PANTHER PTHR10283 358 615 4.3E-210 T 25-04-2016 SMD_RS17555 37ce5d8f40ed04d9ceb3165f9f8b3d06 615 PANTHER PTHR10283 1 218 4.3E-210 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 Gene3D G3DSA:3.40.50.980 8 184 2.4E-31 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 Pfam PF00501 AMP-binding enzyme 15 446 7.5E-61 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 Gene3D G3DSA:3.40.50.980 185 333 1.0E-22 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 Gene3D G3DSA:3.30.300.30 453 546 8.0E-6 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 PANTHER PTHR24095 7 475 2.1E-67 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 Gene3D G3DSA:2.30.38.10 348 438 5.2E-15 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 PANTHER PTHR24095:SF123 7 475 2.1E-67 T 25-04-2016 SMD_RS01085 f082f8695ca7d1f8b2a5de06ca26d77f 552 SUPERFAMILY SSF56801 5 514 2.49E-86 T 25-04-2016 SMD_RS06675 1325edf728c973c897699a125d500d55 181 Gene3D G3DSA:3.40.630.30 18 176 2.3E-16 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06675 1325edf728c973c897699a125d500d55 181 Pfam PF13302 Acetyltransferase (GNAT) domain 22 161 5.8E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS06675 1325edf728c973c897699a125d500d55 181 SUPERFAMILY SSF55729 24 167 3.6E-17 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14900 8741c305818077cce20646fff1386381 628 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 35 620 1.6E-240 T 25-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- SMD_RS14900 8741c305818077cce20646fff1386381 628 PANTHER PTHR34216:SF2 32 297 3.7E-93 T 25-04-2016 SMD_RS14900 8741c305818077cce20646fff1386381 628 PANTHER PTHR34216:SF2 446 602 3.7E-93 T 25-04-2016 SMD_RS14900 8741c305818077cce20646fff1386381 628 Pfam PF01522 Polysaccharide deacetylase 91 256 1.2E-25 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS14900 8741c305818077cce20646fff1386381 628 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 307 600 1.2E-114 T 25-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- SMD_RS14900 8741c305818077cce20646fff1386381 628 SUPERFAMILY SSF88713 212 258 5.56E-35 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS14900 8741c305818077cce20646fff1386381 628 SUPERFAMILY SSF88713 54 184 5.56E-35 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS14900 8741c305818077cce20646fff1386381 628 SUPERFAMILY SSF88713 304 329 5.56E-35 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS14900 8741c305818077cce20646fff1386381 628 Gene3D G3DSA:3.20.20.370 65 258 5.3E-26 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS14900 8741c305818077cce20646fff1386381 628 Gene3D G3DSA:3.20.20.370 306 315 5.3E-26 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS14900 8741c305818077cce20646fff1386381 628 PANTHER PTHR34216 32 297 3.7E-93 T 25-04-2016 SMD_RS14900 8741c305818077cce20646fff1386381 628 PANTHER PTHR34216 446 602 3.7E-93 T 25-04-2016 SMD_RS14900 8741c305818077cce20646fff1386381 628 SUPERFAMILY SSF51445 381 516 6.18E-6 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS02145 bbbd9f5f08b67d9791ad30e3d1d618fc 150 PANTHER PTHR37290:SF1 3 148 2.5E-67 T 25-04-2016 SMD_RS02145 bbbd9f5f08b67d9791ad30e3d1d618fc 150 Pfam PF05360 yiaA/B two helix domain 76 128 8.0E-21 T 25-04-2016 IPR008024 YiaAB two helix SMD_RS02145 bbbd9f5f08b67d9791ad30e3d1d618fc 150 Pfam PF05360 yiaA/B two helix domain 13 65 2.6E-21 T 25-04-2016 IPR008024 YiaAB two helix SMD_RS02145 bbbd9f5f08b67d9791ad30e3d1d618fc 150 PANTHER PTHR37290 3 148 2.5E-67 T 25-04-2016 SMD_RS14455 3a741210f6579f580788872f840365b2 470 PANTHER PTHR13096 27 371 9.3E-54 T 25-04-2016 SMD_RS14455 3a741210f6579f580788872f840365b2 470 PANTHER PTHR13096:SF5 27 371 9.3E-54 T 25-04-2016 SMD_RS14455 3a741210f6579f580788872f840365b2 470 SMART SM00558 92 241 0.0015 T 25-04-2016 IPR003347 JmjC domain SMD_RS14455 3a741210f6579f580788872f840365b2 470 Gene3D G3DSA:2.60.120.650 23 231 1.1E-39 T 25-04-2016 SMD_RS14455 3a741210f6579f580788872f840365b2 470 Pfam PF08007 Cupin superfamily protein 25 337 4.5E-100 T 25-04-2016 IPR003347 JmjC domain SMD_RS14455 3a741210f6579f580788872f840365b2 470 SUPERFAMILY SSF51197 22 303 1.37E-66 T 25-04-2016 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 TIGRFAM TIGR01027 proB: glutamate 5-kinase 22 383 2.8E-121 T 25-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 Gene3D G3DSA:3.40.1160.10 16 273 3.9E-53 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 Hamap MF_00456 Glutamate 5-kinase [proB]. 21 272 34.239 T 25-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 PANTHER PTHR11063 20 385 8.6E-110 T 25-04-2016 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 PRINTS PR00474 Glutamate 5-kinase family signature 223 243 1.1E-38 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 PRINTS PR00474 Glutamate 5-kinase family signature 130 151 1.1E-38 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 1.1E-38 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 PRINTS PR00474 Glutamate 5-kinase family signature 162 189 1.1E-38 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 ProSitePatterns PS00902 Glutamate 5-kinase signature. 221 238 - T 25-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 Pfam PF01472 PUA domain 291 368 6.6E-19 T 25-04-2016 IPR002478 PUA domain GO:0003723 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 SMART SM00359 291 377 7.1E-13 T 25-04-2016 IPR002478 PUA domain GO:0003723 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 Gene3D G3DSA:2.30.130.10 290 383 6.8E-23 T 25-04-2016 IPR015947 PUA-like domain SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 SUPERFAMILY SSF53633 21 270 1.11E-58 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 PIRSF PIRSF000729 18 385 1.2E-129 T 25-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 Pfam PF00696 Amino acid kinase family 22 249 1.8E-35 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS14920 ca37daf2b8a674e43c7e3d86da5c0eca 385 SUPERFAMILY SSF88697 291 384 7.73E-22 T 25-04-2016 IPR015947 PUA-like domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Gene3D G3DSA:2.60.260.20 206 249 1.4E-21 T 25-04-2016 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Gene3D G3DSA:2.60.260.20 104 136 1.4E-21 T 25-04-2016 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Pfam PF01556 DnaJ C terminal domain 118 328 1.3E-40 T 25-04-2016 IPR002939 Chaperone DnaJ, C-terminal SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Pfam PF00684 DnaJ central domain 143 202 4.8E-13 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 SUPERFAMILY SSF49493 195 255 2.75E-18 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 SUPERFAMILY SSF49493 110 134 2.75E-18 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 PANTHER PTHR24078:SF231 1 343 3.1E-154 T 25-04-2016 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 PRINTS PR00625 DnaJ domain signature 7 25 2.7E-29 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 PRINTS PR00625 DnaJ domain signature 42 62 2.7E-29 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 PRINTS PR00625 DnaJ domain signature 62 81 2.7E-29 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 PRINTS PR00625 DnaJ domain signature 25 40 2.7E-29 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 368 39.388 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Gene3D G3DSA:2.60.260.20 251 328 1.1E-20 T 25-04-2016 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 SUPERFAMILY SSF57938 130 206 2.49E-20 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 SUPERFAMILY SSF46565 1 105 6.41E-34 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Gene3D G3DSA:2.10.230.10 137 205 1.7E-21 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 PANTHER PTHR24078 1 343 3.1E-154 T 25-04-2016 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Gene3D G3DSA:1.10.287.110 1 100 3.0E-35 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 344 1.6E-127 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 SMART SM00271 4 62 8.3E-30 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 Pfam PF00226 DnaJ domain 5 67 4.9E-26 T 25-04-2016 IPR001623 DnaJ domain SMD_RS09490 ed1736705a3e4c9e8e1834fe54929ef7 374 SUPERFAMILY SSF49493 254 339 6.02E-20 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMD_RS16605 6a946b37dc8cfd5c244825c4f5bad48f 294 PANTHER PTHR21666 164 261 6.6E-21 T 25-04-2016 SMD_RS16605 6a946b37dc8cfd5c244825c4f5bad48f 294 SUPERFAMILY SSF51261 162 262 1.46E-24 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS16605 6a946b37dc8cfd5c244825c4f5bad48f 294 Pfam PF01551 Peptidase family M23 162 261 4.6E-20 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS16605 6a946b37dc8cfd5c244825c4f5bad48f 294 Gene3D G3DSA:2.70.70.10 124 261 2.3E-26 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 200 215 - T 25-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Gene3D G3DSA:3.30.1340.10 165 244 2.4E-23 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 456 467 - T 25-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 SUPERFAMILY SSF55804 11 147 4.32E-34 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Pfam PF05524 PEP-utilising enzyme, N-terminal 278 396 2.0E-22 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 SUPERFAMILY SSF47831 312 411 1.29E-24 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 523 806 1.0E-104 T 25-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 166 243 2.2E-16 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 276 831 4.1E-138 T 25-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PANTHER PTHR22931 314 817 2.3E-251 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Gene3D G3DSA:3.40.930.10 11 147 2.6E-35 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 SUPERFAMILY SSF55594 165 244 7.98E-20 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR00107 Phosphocarrier protein signature 214 231 3.4E-13 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR00107 Phosphocarrier protein signature 174 190 3.4E-13 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR00107 Phosphocarrier protein signature 199 214 3.4E-13 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 174 181 - T 25-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PANTHER PTHR22931:SF15 314 817 2.3E-251 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 731 746 4.9E-22 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 767 779 4.9E-22 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 714 729 4.9E-22 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 565 584 4.9E-22 T 25-04-2016 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Gene3D G3DSA:1.10.274.10 312 402 2.3E-28 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 SUPERFAMILY SSF51621 526 815 2.07E-99 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Gene3D G3DSA:3.20.20.60 527 831 2.5E-99 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Pfam PF00381 PTS HPr component phosphorylation site 166 243 6.3E-20 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Gene3D G3DSA:3.50.30.10 403 524 1.5E-31 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 714 732 - T 25-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Pfam PF00391 PEP-utilising enzyme, mobile domain 427 497 9.0E-18 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 11 145 1.5E-29 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMD_RS11695 9da904b3549a3afee278b615eec82ea5 836 SUPERFAMILY SSF52009 396 519 4.58E-26 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 ProSitePatterns PS01215 Mrp family signature. 129 145 - T 25-04-2016 IPR000808 Mrp, conserved site GO:0005524 SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 Gene3D G3DSA:3.40.50.300 19 264 9.3E-102 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 23 265 3.0E-100 T 25-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 SUPERFAMILY SSF52540 25 270 3.82E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 Hamap MF_02040 Iron-sulfur cluster carrier protein. 15 266 37.472 T 25-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 PANTHER PTHR23264 21 272 4.3E-143 T 25-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SMD_RS15720 c429b9791cfd13747617c153d72406bf 284 PANTHER PTHR23264:SF19 21 272 4.3E-143 T 25-04-2016 SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Gene3D G3DSA:3.90.550.10 2 240 8.0E-65 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 PANTHER PTHR22572:SF115 6 448 1.5E-204 T 25-04-2016 SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 SUPERFAMILY SSF51161 253 435 2.07E-47 T 25-04-2016 IPR011004 Trimeric LpxA-like SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 SUPERFAMILY SSF53448 5 245 6.99E-57 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Gene3D G3DSA:2.160.10.10 241 334 5.9E-14 T 25-04-2016 SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 3.3E-183 T 25-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Pfam PF12804 MobA-like NTP transferase domain 7 130 1.2E-22 T 25-04-2016 IPR025877 MobA-like NTP transferase SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 2.1E-6 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 428 1.9E-9 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Gene3D G3DSA:2.160.10.10 335 453 1.1E-35 T 25-04-2016 SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 40.375 T 25-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SMD_RS19120 74a959de4bb41f4c2c617c5b8d9d256e 455 PANTHER PTHR22572 6 448 1.5E-204 T 25-04-2016 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 Gene3D G3DSA:3.40.50.2300 187 325 1.1E-47 T 25-04-2016 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 2.0E-10 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 SUPERFAMILY SSF47413 15 73 1.22E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 Gene3D G3DSA:3.40.50.2300 66 186 3.8E-38 T 25-04-2016 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 PANTHER PTHR30146 15 348 6.6E-115 T 25-04-2016 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 SMART SM00354 15 85 1.3E-15 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 SUPERFAMILY SSF53822 75 346 4.52E-68 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 Pfam PF13377 Periplasmic binding protein-like domain 183 344 1.0E-38 T 25-04-2016 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 Gene3D G3DSA:1.10.260.40 15 65 7.1E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS10355 d26ff8876de9f2728bd16c47d9bc4391 349 PANTHER PTHR30146:SF30 15 348 6.6E-115 T 25-04-2016 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 SMART SM00388 155 222 2.3E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 PANTHER PTHR24423 58 368 1.3E-53 T 25-04-2016 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 366 4.3E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 SMART SM00387 265 369 8.9E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 Pfam PF00072 Response regulator receiver domain 18 129 1.9E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 SMART SM00448 15 129 3.0E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 Gene3D G3DSA:1.10.287.130 149 207 8.6E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 Gene3D G3DSA:3.40.50.2300 12 148 1.2E-31 T 25-04-2016 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 SUPERFAMILY SSF52172 14 153 1.57E-32 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 PANTHER PTHR24423:SF554 58 368 1.3E-53 T 25-04-2016 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 SUPERFAMILY SSF55874 211 367 3.01E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 SUPERFAMILY SSF47384 141 223 3.34E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 222 1.4E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10180 e8d3e1f98d8d235cbc91b7e2fd0954ff 377 Gene3D G3DSA:3.30.565.10 208 368 2.0E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02235 54c8f27eb2a22b74d476fd75ffff0cf8 186 Pfam PF02592 Putative vitamin uptake transporter 44 86 4.3E-8 T 25-04-2016 IPR003744 Protein of unknown function DUF165 SMD_RS02235 54c8f27eb2a22b74d476fd75ffff0cf8 186 Pfam PF02592 Putative vitamin uptake transporter 85 173 2.1E-18 T 25-04-2016 IPR003744 Protein of unknown function DUF165 SMD_RS02235 54c8f27eb2a22b74d476fd75ffff0cf8 186 PANTHER PTHR34300 1 181 4.4E-69 T 25-04-2016 SMD_RS02235 54c8f27eb2a22b74d476fd75ffff0cf8 186 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 84 167 1.1E-15 T 25-04-2016 IPR003744 Protein of unknown function DUF165 SMD_RS02235 54c8f27eb2a22b74d476fd75ffff0cf8 186 PANTHER PTHR34300:SF1 1 181 4.4E-69 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Gene3D G3DSA:2.40.50.140 414 534 3.3E-33 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 SUPERFAMILY SSF50249 414 533 3.26E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Pfam PF01068 ATP dependent DNA ligase domain 212 409 1.1E-35 T 25-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 PANTHER PTHR10459:SF10 3 535 1.9E-78 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Pfam PF04679 ATP dependent DNA ligase C terminal region 430 519 9.2E-11 T 25-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Gene3D G3DSA:3.30.470.30 238 352 2.3E-29 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 SUPERFAMILY SSF56091 206 409 2.88E-55 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Pfam PF04675 DNA ligase N terminus 3 166 2.9E-22 T 25-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 533 6.1E-189 T 25-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 PANTHER PTHR10459 3 535 1.9E-78 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Gene3D G3DSA:3.30.1490.70 366 409 8.9E-22 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 Gene3D G3DSA:3.30.1490.70 205 237 8.9E-22 T 25-04-2016 SMD_RS16150 42916d7c45eff560681b7fee42f6ed76 535 SUPERFAMILY SSF117018 3 172 8.89E-5 T 25-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 247 257 7.3E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 301 7.3E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 229 243 7.3E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 282 7.3E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Gene3D G3DSA:1.10.287.130 70 137 1.3E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PANTHER PTHR24423 443 617 2.2E-154 T 25-04-2016 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PANTHER PTHR24423 55 307 2.2E-154 T 25-04-2016 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Pfam PF01627 Hpt domain 650 727 3.0E-10 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Gene3D G3DSA:3.30.565.10 148 302 5.7E-49 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SMART SM00387 188 304 4.8E-40 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PANTHER PTHR24423:SF382 443 617 2.2E-154 T 25-04-2016 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 PANTHER PTHR24423:SF382 55 307 2.2E-154 T 25-04-2016 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SUPERFAMILY SSF52172 459 584 1.85E-37 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SMART SM00388 76 141 1.2E-22 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Pfam PF00072 Response regulator receiver domain 461 574 4.3E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SMART SM00448 459 575 5.3E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SUPERFAMILY SSF47226 625 740 4.19E-23 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 188 302 2.8E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SUPERFAMILY SSF55874 130 302 1.7E-48 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SUPERFAMILY SSF47384 59 141 1.35E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 SMART SM00073 640 737 0.0045 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Gene3D G3DSA:1.20.120.160 624 737 5.1E-28 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Gene3D G3DSA:3.40.50.2300 458 579 6.9E-42 T 25-04-2016 SMD_RS20190 0d412dd64de6cff823d2afea4d6db16c 746 Pfam PF00512 His Kinase A (phospho-acceptor) domain 76 140 2.3E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 PANTHER PTHR10066 26 162 6.1E-241 T 25-04-2016 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 355 486 3.9E-5 T 25-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Pfam PF00703 Glycosyl hydrolases family 2 230 338 2.3E-10 T 25-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 SUPERFAMILY SSF49303 229 337 2.88E-18 T 25-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 SUPERFAMILY SSF49785 26 226 4.39E-45 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 SUPERFAMILY SSF49303 695 791 2.45E-6 T 25-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Gene3D G3DSA:2.60.120.260 26 160 7.5E-23 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Gene3D G3DSA:2.60.120.260 197 212 7.5E-23 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 PANTHER PTHR10066:SF12 191 862 6.1E-241 T 25-04-2016 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 PANTHER PTHR10066:SF12 26 162 6.1E-241 T 25-04-2016 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 SUPERFAMILY SSF49303 794 871 8.63E-13 T 25-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Gene3D G3DSA:3.20.20.80 626 696 8.5E-67 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Gene3D G3DSA:3.20.20.80 337 586 8.5E-67 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 SUPERFAMILY SSF51445 335 693 1.25E-104 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 Gene3D G3DSA:2.60.40.320 213 336 2.5E-19 T 25-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 SMD_RS10375 c22f730f3ae16dc05674e9640ad8d523 872 PANTHER PTHR10066 191 862 6.1E-241 T 25-04-2016 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 Gene3D G3DSA:2.40.50.100 26 59 4.4E-21 T 25-04-2016 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 Gene3D G3DSA:2.40.50.100 134 166 4.4E-21 T 25-04-2016 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 1 328 3.1E-71 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 Pfam PF13533 Biotin-lipoyl like 27 73 2.0E-12 T 25-04-2016 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 Pfam PF13437 HlyD family secretion protein 137 237 3.0E-7 T 25-04-2016 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 PANTHER PTHR30469:SF12 1 336 1.4E-108 T 25-04-2016 IPR022824 Multidrug resistance protein MdtA SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 SUPERFAMILY SSF111369 16 252 1.31E-50 T 25-04-2016 SMD_RS04820 e378c74e12c0adf34a3fb2530b83e5dc 336 PANTHER PTHR30469 1 336 1.4E-108 T 25-04-2016 SMD_RS10205 6c6162d5991f4e82ca210c29a525c5df 350 PANTHER PTHR35527:SF2 1 350 9.4E-153 T 25-04-2016 SMD_RS10205 6c6162d5991f4e82ca210c29a525c5df 350 SUPERFAMILY SSF56235 26 319 3.7E-98 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS10205 6c6162d5991f4e82ca210c29a525c5df 350 PANTHER PTHR35527 1 350 9.4E-153 T 25-04-2016 SMD_RS10205 6c6162d5991f4e82ca210c29a525c5df 350 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 26 312 2.5E-45 T 25-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal SMD_RS10205 6c6162d5991f4e82ca210c29a525c5df 350 Gene3D G3DSA:3.60.60.10 26 325 9.5E-105 T 25-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 SMD_RS11515 2e00d35989b7e08483759cbee15478ab 158 PANTHER PTHR31757 2 158 1.4E-88 T 25-04-2016 SMD_RS11515 2e00d35989b7e08483759cbee15478ab 158 Gene3D G3DSA:3.10.450.50 15 156 1.2E-74 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS11515 2e00d35989b7e08483759cbee15478ab 158 SUPERFAMILY SSF54427 5 158 2.3E-79 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS11515 2e00d35989b7e08483759cbee15478ab 158 Pfam PF07080 Protein of unknown function (DUF1348) 7 148 3.7E-72 T 25-04-2016 IPR009783 Protein of unknown function DUF1348 SMD_RS11515 2e00d35989b7e08483759cbee15478ab 158 PANTHER PTHR31757:SF0 2 158 1.4E-88 T 25-04-2016 SMD_RS02490 b57a5af162d17c1369c4105d318e31d9 135 PANTHER PTHR35174 3 128 2.2E-43 T 25-04-2016 SMD_RS02490 b57a5af162d17c1369c4105d318e31d9 135 PANTHER PTHR35174:SF3 3 128 2.2E-43 T 25-04-2016 SMD_RS02490 b57a5af162d17c1369c4105d318e31d9 135 Pfam PF03795 YCII-related domain 3 116 2.4E-20 T 25-04-2016 IPR005545 YCII-related SMD_RS02490 b57a5af162d17c1369c4105d318e31d9 135 SUPERFAMILY SSF54909 3 116 1.02E-30 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS02490 b57a5af162d17c1369c4105d318e31d9 135 Gene3D G3DSA:3.30.70.1060 1 116 5.6E-35 T 25-04-2016 SMD_RS20920 bc9e3eb3337d96fca88919153dff60f6 273 Pfam PF10127 Predicted nucleotidyltransferase 13 265 2.2E-87 T 25-04-2016 IPR018775 Nucleotidyltransferase, predicted SMD_RS20920 bc9e3eb3337d96fca88919153dff60f6 273 PANTHER PTHR34817 1 269 1.5E-82 T 25-04-2016 SMD_RS20920 bc9e3eb3337d96fca88919153dff60f6 273 PANTHER PTHR34817:SF2 1 269 1.5E-82 T 25-04-2016 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 PIRSF PIRSF005901 2 188 7.6E-61 T 25-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 SMART SM01185 69 123 5.9E-20 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 25-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Gene3D G3DSA:2.40.50.140 66 129 4.9E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Gene3D G3DSA:2.40.50.140 130 187 3.3E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 PANTHER PTHR30053 1 188 1.5E-79 T 25-04-2016 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 4.0E-71 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 SUPERFAMILY SSF50249 130 187 1.03E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.2E-19 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 SUPERFAMILY SSF50104 5 64 9.63E-16 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 SMART SM00841 131 186 4.8E-32 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 SUPERFAMILY SSF50249 70 128 1.41E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 46.913 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.3E-25 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Gene3D G3DSA:2.30.30.30 5 65 1.6E-21 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMD_RS15020 5add27986ca8bc372171f80ae27c31ec 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 4.0E-20 T 25-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 PANTHER PTHR24031 636 693 5.4E-116 T 25-04-2016 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 PANTHER PTHR24031 310 613 5.4E-116 T 25-04-2016 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 Gene3D G3DSA:3.40.50.300 465 648 9.8E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 SMART SM00490 515 599 6.6E-21 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 SMART SM00487 276 470 1.9E-28 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 Pfam PF00271 Helicase conserved C-terminal domain 489 598 3.5E-18 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 PANTHER PTHR24031 270 293 5.4E-116 T 25-04-2016 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 673 7.3E-219 T 25-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 PANTHER PTHR24031:SF249 270 293 5.4E-116 T 25-04-2016 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 Gene3D G3DSA:2.40.50.140 55 150 1.2E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 Pfam PF00270 DEAD/DEAH box helicase 284 418 7.6E-16 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 SUPERFAMILY SSF50249 16 183 2.91E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 Pfam PF17191 RecG wedge domain 22 180 1.0E-13 T 25-04-2016 IPR033454 RecG, wedge domain SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 PANTHER PTHR24031:SF249 636 693 5.4E-116 T 25-04-2016 SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 SUPERFAMILY SSF52540 202 464 2.11E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 Gene3D G3DSA:3.40.50.300 267 464 2.8E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 SUPERFAMILY SSF52540 463 664 1.74E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17860 749f57f10ee4767b2307432306eb707f 703 PANTHER PTHR24031:SF249 310 613 5.4E-116 T 25-04-2016 SMD_RS07995 6af9faea32e1fe9c7e5ddf51787fc978 300 SUPERFAMILY SSF81301 3 156 2.29E-20 T 25-04-2016 SMD_RS07995 6af9faea32e1fe9c7e5ddf51787fc978 300 Gene3D G3DSA:3.30.460.10 19 140 2.1E-5 T 25-04-2016 SMD_RS07995 6af9faea32e1fe9c7e5ddf51787fc978 300 Gene3D G3DSA:1.10.1410.20 172 228 6.9E-4 T 25-04-2016 IPR018952 2'-5'-oligoadenylate synthetase 1, domain 2/C-terminal SMD_RS07995 6af9faea32e1fe9c7e5ddf51787fc978 300 Pfam PF01909 Nucleotidyltransferase domain 31 74 4.0E-5 T 25-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 PANTHER PTHR21248 17 472 7.6E-93 T 25-04-2016 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 SUPERFAMILY SSF56024 94 301 1.31E-50 T 25-04-2016 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 57 9.2E-5 T 25-04-2016 IPR027379 Cardiolipin synthase N-terminal SMD_RS21435 89d39317608fff4177615b070cff94e4 472 Pfam PF13091 PLD-like domain 130 271 4.4E-20 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS21435 89d39317608fff4177615b070cff94e4 472 Pfam PF13091 PLD-like domain 314 432 5.7E-23 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS21435 89d39317608fff4177615b070cff94e4 472 SMART SM00155 214 241 4.2E-4 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 SMART SM00155 385 412 0.033 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 SUPERFAMILY SSF56024 263 459 6.28E-47 T 25-04-2016 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 Gene3D G3DSA:3.30.870.10 108 302 5.4E-40 T 25-04-2016 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 21 469 1.2E-99 T 25-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 Gene3D G3DSA:3.30.870.10 307 448 5.4E-34 T 25-04-2016 SMD_RS21435 89d39317608fff4177615b070cff94e4 472 PANTHER PTHR21248:SF9 17 472 7.6E-93 T 25-04-2016 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 461 2.6E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 PANTHER PTHR24423 128 460 9.7E-102 T 25-04-2016 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 PANTHER PTHR24423:SF531 128 460 9.7E-102 T 25-04-2016 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 5.2E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.2E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 5.2E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 Pfam PF00672 HAMP domain 169 236 9.4E-17 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 305 4.3E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 SUPERFAMILY SSF158472 189 237 4.58E-8 T 25-04-2016 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 SUPERFAMILY SSF47384 224 306 5.1E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 SMART SM00387 351 463 9.7E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 SUPERFAMILY SSF55874 294 460 1.15E-40 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 SMART SM00388 241 305 1.9E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 Gene3D G3DSA:3.30.565.10 309 460 5.5E-39 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 Gene3D G3DSA:1.10.287.130 231 300 1.1E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20910 0fac73dca0637bc98c0812a62a8616de 463 SMART SM00304 188 240 1.5E-10 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SUPERFAMILY SSF47384 185 259 2.16E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PANTHER PTHR24423:SF438 23 153 5.9E-141 T 25-04-2016 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PANTHER PTHR24423:SF438 179 556 5.9E-141 T 25-04-2016 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SUPERFAMILY SSF55874 251 426 8.91E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 2.8E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 2.8E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 2.8E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 2.8E-17 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SUPERFAMILY SSF52172 442 558 4.7E-28 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SMART SM00387 302 423 5.5E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PANTHER PTHR24423 23 153 5.9E-141 T 25-04-2016 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 PANTHER PTHR24423 179 556 5.9E-141 T 25-04-2016 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Pfam PF00072 Response regulator receiver domain 445 527 1.6E-16 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SUPERFAMILY SSF55785 33 148 3.29E-5 T 25-04-2016 IPR000014 PAS domain SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SMART SM00388 195 261 3.5E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Gene3D G3DSA:3.30.565.10 247 425 3.6E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Gene3D G3DSA:3.40.50.2300 443 556 2.7E-28 T 25-04-2016 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Pfam PF00512 His Kinase A (phospho-acceptor) domain 197 260 7.0E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Gene3D G3DSA:1.10.287.130 188 246 4.7E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Gene3D G3DSA:3.30.450.20 42 156 2.0E-5 T 25-04-2016 SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 422 2.6E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13860 5437e1301f4ebc56764801558f5a82d9 567 SMART SM00448 443 553 3.6E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 78 2.4E-14 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 Gene3D G3DSA:3.40.30.10 2 87 5.9E-26 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 PANTHER PTHR11260:SF157 1 204 2.0E-70 T 25-04-2016 SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 SUPERFAMILY SSF52833 1 83 3.37E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 195 1.7E-4 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 SUPERFAMILY SSF47616 72 199 1.39E-23 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 PANTHER PTHR11260 1 204 2.0E-70 T 25-04-2016 SMD_RS19730 fbe82f06d8ec1f63f26f6b026ba58547 206 Gene3D G3DSA:1.20.1050.10 88 202 1.0E-24 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01131 DNA topoisomerase 151 594 5.7E-113 T 25-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 653 6.4E-215 T 25-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 SUPERFAMILY SSF56712 1 608 7.85E-178 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.290.10 281 408 1.7E-33 T 25-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 SMART SM00493 1 122 2.7E-25 T 25-04-2016 IPR006171 Toprim domain SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 SUPERFAMILY SSF57783 622 656 1.67E-9 T 25-04-2016 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01751 Toprim domain 3 128 1.4E-16 T 25-04-2016 IPR006171 Toprim domain SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 SMART SM00437 271 561 1.8E-61 T 25-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 623 657 8.7E-10 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.460.10 152 211 1.3E-51 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.460.10 477 608 1.3E-51 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PANTHER PTHR11390 1 506 2.0E-161 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PANTHER PTHR11390 524 670 2.0E-161 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:3.40.50.140 1 147 3.8E-47 T 25-04-2016 IPR006171 Toprim domain SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 25-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 SMART SM00436 122 217 1.9E-35 T 25-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:3.30.65.10 623 657 1.3E-9 T 25-04-2016 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 6.0E-25 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 6.0E-25 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 6.0E-25 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 6.0E-25 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS08200 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 6.0E-25 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS11860 30373f8d81695d3942fae527f2b053e1 290 Pfam PF02219 Methylenetetrahydrofolate reductase 33 228 1.1E-10 T 25-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMD_RS11860 30373f8d81695d3942fae527f2b053e1 290 PANTHER PTHR21091:SF121 135 203 1.6E-17 T 25-04-2016 SMD_RS11860 30373f8d81695d3942fae527f2b053e1 290 SUPERFAMILY SSF51730 16 281 7.85E-45 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMD_RS11860 30373f8d81695d3942fae527f2b053e1 290 Gene3D G3DSA:3.20.20.220 15 281 1.1E-39 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMD_RS11860 30373f8d81695d3942fae527f2b053e1 290 PANTHER PTHR21091 135 203 1.6E-17 T 25-04-2016 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 25-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 PIRSF PIRSF000190 2 199 4.7E-69 T 25-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 PANTHER PTHR10851:SF0 2 199 5.3E-87 T 25-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 SUPERFAMILY SSF50475 2 199 4.68E-60 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 4.0E-13 T 25-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 Gene3D G3DSA:2.30.110.10 2 199 3.8E-76 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 36.041 T 25-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 197 7.3E-66 T 25-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 PANTHER PTHR10851 2 199 5.3E-87 T 25-04-2016 SMD_RS16510 2fc7099503ea7e7c43903d0f1ab9a04a 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 17 105 6.1E-28 T 25-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 Gene3D G3DSA:3.30.70.920 61 157 1.3E-31 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 SUPERFAMILY SSF46785 7 65 6.39E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 5.5E-20 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 1.6E-20 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 PANTHER PTHR30154 1 157 1.3E-89 T 25-04-2016 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 PANTHER PTHR30154:SF0 1 157 1.3E-89 T 25-04-2016 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 SUPERFAMILY SSF54909 70 157 2.95E-20 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 SMART SM00344 8 117 1.2E-43 T 25-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 Gene3D G3DSA:1.10.10.10 9 59 7.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.8E-18 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.8E-18 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS02660 02ad0ea32d4440d904ca1e98eb921a40 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.8E-18 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS09915 82084942cd8fc2374b60a6b853a2e9ce 152 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 17 140 2.4E-22 T 25-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 SMD_RS09915 82084942cd8fc2374b60a6b853a2e9ce 152 SUPERFAMILY SSF55961 7 145 7.24E-34 T 25-04-2016 SMD_RS09915 82084942cd8fc2374b60a6b853a2e9ce 152 Gene3D G3DSA:3.30.530.20 10 143 1.2E-28 T 25-04-2016 IPR023393 START-like domain SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 SUPERFAMILY SSF52540 6 205 8.88E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 SMART SM00382 31 209 4.6E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 PANTHER PTHR24220 8 190 1.8E-83 T 25-04-2016 SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 Gene3D G3DSA:3.40.50.300 5 191 1.0E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 7 203 4.9E-68 T 25-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 Pfam PF00005 ABC transporter 25 160 1.1E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS14800 ede4e5c5b0f85868db4f35997fede5c6 209 PANTHER PTHR24220:SF508 8 190 1.8E-83 T 25-04-2016 SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 SMART SM00843 719 784 3.1E-40 T 25-04-2016 IPR018541 FtsK gamma domain SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 Gene3D G3DSA:3.40.50.300 370 676 7.0E-92 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 32 206 3.7E-40 T 25-04-2016 IPR025199 DNA translocase FtsK, 4TM region SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 PANTHER PTHR22683 227 783 2.5E-268 T 25-04-2016 SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 SUPERFAMILY SSF46785 719 784 6.53E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 SMART SM00382 431 630 7.5E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 Pfam PF09397 Ftsk gamma domain 721 781 3.5E-27 T 25-04-2016 IPR018541 FtsK gamma domain SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 Pfam PF01580 FtsK/SpoIIIE family 396 609 6.1E-65 T 25-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 SUPERFAMILY SSF52540 368 681 2.05E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11090 0a615efa3c6a20a3753a118bc269af39 786 PANTHER PTHR22683:SF41 227 783 2.5E-268 T 25-04-2016 SMD_RS04310 679392a84389b420dd4d729217102d28 463 PANTHER PTHR21337 17 463 1.2E-261 T 25-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS04310 679392a84389b420dd4d729217102d28 463 SUPERFAMILY SSF51569 18 457 5.64E-182 T 25-04-2016 SMD_RS04310 679392a84389b420dd4d729217102d28 463 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 21 462 5.8E-222 T 25-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS04310 679392a84389b420dd4d729217102d28 463 Pfam PF01474 Class-II DAHP synthetase family 21 455 1.5E-189 T 25-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS04310 679392a84389b420dd4d729217102d28 463 PANTHER PTHR21337:SF0 17 463 1.2E-261 T 25-04-2016 SMD_RS14425 0e1a32869c09b5f2fae9ae16c0967ab8 342 Pfam PF13346 ABC-2 family transporter protein 111 178 2.0E-5 T 25-04-2016 IPR025699 ABC-2 membrane transporter-like SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PANTHER PTHR11963 97 455 3.4E-141 T 25-04-2016 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 Gene3D G3DSA:3.40.630.10 139 453 1.4E-111 T 25-04-2016 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 25-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 429 1.5E-98 T 25-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PANTHER PTHR11963:SF13 97 455 3.4E-141 T 25-04-2016 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 SUPERFAMILY SSF53187 141 453 1.7E-105 T 25-04-2016 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 8.8E-41 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 8.8E-41 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 8.8E-41 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 8.8E-41 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS01710 4b738b9b3adbdd3da64576e8cf0f2f8d 455 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 8.8E-41 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 Pfam PF01804 Penicillin amidase 46 761 4.0E-122 T 25-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 Gene3D G3DSA:1.10.439.10 41 181 6.8E-40 T 25-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 PIRSF PIRSF001227 6 769 3.9E-147 T 25-04-2016 IPR014395 Penicillin acylase GO:0016811 SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 PANTHER PTHR34218:SF2 1 775 2.9E-167 T 25-04-2016 SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 Gene3D G3DSA:3.60.20.10 398 623 6.4E-76 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 Gene3D G3DSA:3.60.20.10 254 337 6.4E-76 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 PANTHER PTHR34218 1 775 2.9E-167 T 25-04-2016 SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 SUPERFAMILY SSF56235 42 773 6.17E-164 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS07100 5ebc22bf72f65feba88bdac65c4131a2 775 Gene3D G3DSA:2.30.120.10 338 388 1.0E-7 T 25-04-2016 SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 SUPERFAMILY SSF48403 41 231 4.23E-44 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 Gene3D G3DSA:1.25.40.20 41 231 1.4E-43 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 SMART SM00248 135 164 59.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 SMART SM00248 36 65 1500.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 SMART SM00248 69 98 3.5E-4 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 SMART SM00248 168 202 3.8 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 Pfam PF12796 Ankyrin repeats (3 copies) 44 100 7.7E-7 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 Pfam PF12796 Ankyrin repeats (3 copies) 114 204 6.3E-10 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13265 7bfcf0cced55b62831866ec42a26a1c0 233 PANTHER PTHR24198 44 231 3.7E-39 T 25-04-2016 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 43 4.8E-12 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 PANTHER PTHR34860:SF1 1 74 1.4E-20 T 25-04-2016 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 PANTHER PTHR34860 1 74 1.4E-20 T 25-04-2016 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 Gene3D G3DSA:2.10.260.10 2 42 4.0E-13 T 25-04-2016 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 SUPERFAMILY SSF89447 2 43 1.1E-10 T 25-04-2016 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 SMART SM00966 3 48 1.0E-10 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SMD_RS10640 90633a1359acc742b81a63530e83b335 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 42 3.7E-9 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 Pfam PF02390 Putative methyltransferase 72 239 1.1E-47 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.633 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 58 243 2.0E-44 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 PANTHER PTHR23417 23 243 9.7E-68 T 25-04-2016 SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 Gene3D G3DSA:3.40.50.150 61 198 4.3E-19 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 PANTHER PTHR23417:SF14 23 243 9.7E-68 T 25-04-2016 SMD_RS17550 b9750ba8e4737b8ff61861bd9528fa57 244 SUPERFAMILY SSF53335 23 241 2.05E-40 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS06510 16985e831641bb98333628a24e596fc8 740 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 497 691 5.5E-62 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 Pfam PF00672 HAMP domain 192 259 5.0E-14 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 SMART SM00283 445 692 9.1E-92 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 Gene3D G3DSA:1.10.287.950 460 664 6.7E-62 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PANTHER PTHR32089 149 245 7.0E-162 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PANTHER PTHR32089 427 695 7.0E-162 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 SMART SM00304 392 444 8.1 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 SMART SM00304 302 353 2.3 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 SMART SM00304 211 263 4.5E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 181 1.1E-10 T 25-04-2016 IPR024478 4HB MCP domain SMD_RS06510 16985e831641bb98333628a24e596fc8 740 SUPERFAMILY SSF158472 211 261 5.49E-9 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 SUPERFAMILY SSF58104 412 693 3.53E-72 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PANTHER PTHR32089:SF63 149 245 7.0E-162 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PANTHER PTHR32089:SF63 427 695 7.0E-162 T 25-04-2016 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 466 495 1.5E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 572 601 1.5E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 570 1.5E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS06510 16985e831641bb98333628a24e596fc8 740 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 620 649 1.5E-56 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Pfam PF00012 Hsp70 protein 2 73 1.2E-14 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Pfam PF00012 Hsp70 protein 78 560 4.8E-111 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 SUPERFAMILY SSF53067 1 155 5.18E-48 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Gene3D G3DSA:3.30.420.40 2 160 2.1E-50 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 5 12 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 440 456 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 1 14 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 294 310 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 111 131 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 29 41 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 350 369 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 325 345 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PRINTS PR00301 70kDa heat shock protein signature 171 181 2.6E-41 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 SUPERFAMILY SSF100920 347 511 9.03E-32 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 165 178 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PANTHER PTHR19375 1 519 1.2E-142 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Gene3D G3DSA:3.90.640.10 199 273 7.8E-4 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Gene3D G3DSA:3.30.420.40 161 198 3.9E-28 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Gene3D G3DSA:3.30.420.40 279 320 3.9E-28 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 Gene3D G3DSA:2.60.34.10 332 519 1.8E-37 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 SUPERFAMILY SSF53067 160 340 6.79E-41 T 25-04-2016 SMD_RS21595 9ac6b4b86249464ebaf15ada83f4f1f5 562 PANTHER PTHR19375:SF196 1 519 1.2E-142 T 25-04-2016 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 SMART SM00448 1 112 1.1E-32 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 PANTHER PTHR26402:SF524 1 114 2.2E-40 T 25-04-2016 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 PANTHER PTHR26402 1 114 2.2E-40 T 25-04-2016 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 Pfam PF00072 Response regulator receiver domain 3 112 7.0E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 SUPERFAMILY SSF52172 2 123 3.56E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 SMART SM00850 144 241 6.0E-28 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 Pfam PF04397 LytTr DNA-binding domain 146 240 1.1E-24 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 Gene3D G3DSA:2.40.50.40 138 199 1.7E-14 T 25-04-2016 SMD_RS19240 c93e10bfbe48685f0c37df1fdc8281b2 243 Gene3D G3DSA:3.40.50.2300 2 115 2.3E-35 T 25-04-2016 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 SUPERFAMILY SSF51905 4 176 1.38E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 SUPERFAMILY SSF51905 266 382 1.38E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 7.0E-113 T 25-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 1.9E-13 T 25-04-2016 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.9E-13 T 25-04-2016 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 1.9E-13 T 25-04-2016 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 1.9E-13 T 25-04-2016 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 Pfam PF01494 FAD binding domain 4 319 2.2E-19 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 Gene3D G3DSA:3.50.50.60 267 355 1.5E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 Gene3D G3DSA:3.50.50.60 4 181 1.5E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 PANTHER PTHR13789 1 383 5.2E-64 T 25-04-2016 SMD_RS06780 b8cfcc7a939a132f4aa46e0ace1e01dc 392 PANTHER PTHR13789:SF5 1 383 5.2E-64 T 25-04-2016 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 SMART SM00448 1 113 6.1E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 SUPERFAMILY SSF52172 1 128 2.85E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 SUPERFAMILY SSF46894 124 221 1.79E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 PANTHER PTHR26402:SF552 1 222 1.9E-72 T 25-04-2016 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 Gene3D G3DSA:3.40.50.2300 1 126 5.9E-35 T 25-04-2016 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 PANTHER PTHR26402 1 222 1.9E-72 T 25-04-2016 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 3.1E-14 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 Gene3D G3DSA:1.10.10.10 127 221 9.8E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 SMART SM00862 147 221 6.8E-15 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS16310 8606f0e517725b672cda5e4929fbbe72 237 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-24 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Gene3D G3DSA:1.10.730.10 667 815 7.1E-40 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 879 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Gene3D G3DSA:3.90.740.10 227 442 2.0E-53 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 219 238 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 2.8E-46 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Gene3D G3DSA:3.40.50.620 8 226 1.2E-151 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Gene3D G3DSA:3.40.50.620 637 666 1.2E-151 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Gene3D G3DSA:3.40.50.620 443 591 1.2E-151 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 637 674 8.4E-6 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 590 3.4E-8 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 175 1.7E-27 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 879 23.296 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 SUPERFAMILY SSF52374 8 230 2.43E-146 T 25-04-2016 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 SUPERFAMILY SSF52374 434 684 2.43E-146 T 25-04-2016 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 SUPERFAMILY SSF47323 683 878 4.49E-32 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Pfam PF08264 Anticodon-binding domain of tRNA 718 841 1.9E-12 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 225 421 2.1E-66 T 25-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946 248 273 0.0 T 25-04-2016 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946 1 210 0.0 T 25-04-2016 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946 637 879 0.0 T 25-04-2016 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946 293 592 0.0 T 25-04-2016 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946:SF7 248 273 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946:SF7 1 210 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946:SF7 637 879 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 PANTHER PTHR11946:SF7 293 592 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMD_RS15920 3dd12f5fe9c89362c8828b9a2a95f56a 880 SUPERFAMILY SSF50677 230 433 1.26E-45 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 PANTHER PTHR23090 1 540 1.2E-155 T 25-04-2016 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 TIGRFAM TIGR00552 nadE: NAD+ synthetase 276 524 1.6E-57 T 25-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 Gene3D G3DSA:3.40.50.620 269 526 1.8E-70 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 SUPERFAMILY SSF52402 268 527 2.21E-74 T 25-04-2016 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 Pfam PF00795 Carbon-nitrogen hydrolase 5 245 4.5E-25 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 Pfam PF02540 NAD synthase 269 519 1.3E-68 T 25-04-2016 IPR022310 NAD/GMP synthase SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 Gene3D G3DSA:3.60.110.10 3 250 1.2E-60 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 SUPERFAMILY SSF56317 1 247 6.54E-61 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 25-04-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 SMD_RS17420 d7ba7df39a932f08ff5468f461469f82 544 PIRSF PIRSF006630 1 544 1.6E-179 T 25-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 25-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.467 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 4.6E-64 T 25-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 PIRSF PIRSF002181 1 142 5.3E-51 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 SUPERFAMILY SSF52161 1 140 2.62E-59 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 PANTHER PTHR11545 1 142 6.5E-79 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 Pfam PF00572 Ribosomal protein L13 15 138 1.0E-55 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMD_RS20225 4d857f2d10a0dd025869e37ac7445f83 142 Gene3D G3DSA:3.90.1180.10 3 141 1.1E-62 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 SUPERFAMILY SSF52374 115 452 1.3E-86 T 25-04-2016 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Gene3D G3DSA:3.30.1360.70 2 111 1.5E-30 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 SUPERFAMILY SSF55190 2 112 2.62E-26 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 562 1.6E-124 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 SUPERFAMILY SSF47323 435 562 1.63E-34 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 6.8E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 6.8E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 6.8E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 6.8E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 PANTHER PTHR11956:SF6 1 562 1.5E-239 T 25-04-2016 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Gene3D G3DSA:1.10.730.10 447 562 5.7E-41 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Pfam PF00750 tRNA synthetases class I (R) 113 410 1.1E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Gene3D G3DSA:3.40.50.620 117 446 1.0E-102 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 SMART SM01016 3 92 6.3E-40 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 92 1.0E-25 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 25.14 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 Pfam PF05746 DALR anticodon binding domain 441 562 3.9E-35 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 PANTHER PTHR11956 1 562 1.5E-239 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMD_RS01815 219c390f101fed4fedb8e79a3a38663b 562 SMART SM00836 441 562 3.2E-52 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 SUPERFAMILY SSF51445 174 720 1.47E-247 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 156 475 2.2E-150 T 25-04-2016 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 477 700 1.4E-94 T 25-04-2016 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 SUPERFAMILY SSF55545 29 171 9.42E-30 T 25-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 Gene3D G3DSA:3.30.379.10 30 168 5.0E-34 T 25-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 PIRSF PIRSF029900 11 724 3.2E-299 T 25-04-2016 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 Gene3D G3DSA:3.20.20.80 173 496 3.5E-156 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 34 152 1.9E-22 T 25-04-2016 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 PANTHER PTHR39207 5 722 0.0 T 25-04-2016 SMD_RS11745 8c9e677510be133687b0db1681138cd1 724 Gene3D G3DSA:3.90.1330.10 499 719 2.4E-91 T 25-04-2016 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 SMD_RS03035 34861d6949010eae65b0e494afceab07 275 Gene3D G3DSA:3.40.50.300 16 247 2.5E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03035 34861d6949010eae65b0e494afceab07 275 Pfam PF00005 ABC transporter 39 188 1.9E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS03035 34861d6949010eae65b0e494afceab07 275 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS03035 34861d6949010eae65b0e494afceab07 275 PANTHER PTHR24220 23 263 1.4E-141 T 25-04-2016 SMD_RS03035 34861d6949010eae65b0e494afceab07 275 SMART SM00382 46 244 2.6E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS03035 34861d6949010eae65b0e494afceab07 275 PANTHER PTHR24220:SF483 23 263 1.4E-141 T 25-04-2016 SMD_RS03035 34861d6949010eae65b0e494afceab07 275 SUPERFAMILY SSF52540 21 247 7.89E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 22 8.4E-9 T 25-04-2016 IPR024973 ESPR domain SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF03895 YadA-like C-terminal region 1470 1551 2.0E-16 T 25-04-2016 IPR005594 YadA-like, C-terminal SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:3.30.1300.30 1457 1551 2.0E-14 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 SUPERFAMILY SSF101967 676 764 5.1E-7 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 SUPERFAMILY SSF101967 1130 1259 1.24E-17 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1156 1184 9.1E-5 T 25-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05658 Head domain of trimeric autotransporter adhesin 168 190 2.0E-4 T 25-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05658 Head domain of trimeric autotransporter adhesin 489 515 2.3E-4 T 25-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05658 Head domain of trimeric autotransporter adhesin 388 409 4.4E-4 T 25-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 SUPERFAMILY SSF101967 804 929 4.97E-17 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:2.150.10.10 801 929 5.7E-21 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:2.150.10.10 94 249 1.8E-34 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:2.150.10.10 1128 1259 1.0E-18 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:2.150.10.10 385 572 5.5E-33 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:2.150.10.10 676 764 2.1E-4 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Gene3D G3DSA:1.20.5.170 1015 1060 7.4E-5 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 736 759 1.8E-6 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 641 664 3.9E-6 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 221 244 3.0E-6 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 SUPERFAMILY SSF101967 430 573 3.01E-24 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 SUPERFAMILY SSF54523 1455 1551 7.69E-14 T 25-04-2016 SMD_RS17815 e1d967a64b243e524c40bd168d9539fd 1551 SUPERFAMILY SSF101967 95 249 1.27E-29 T 25-04-2016 SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 PANTHER PTHR35037:SF3 1 3624 1.9E-139 T 25-04-2016 SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 2716 2859 5.02E-12 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 2.4E-9 T 25-04-2016 IPR024973 ESPR domain SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SMART SM00869 3357 3620 3.1E-23 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 3001 3244 1.79E-11 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 PANTHER PTHR35037 1 3624 1.9E-139 T 25-04-2016 SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1784 1815 7.6E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2670 2701 1.4E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1883 1914 3.4E-6 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 693 724 2.5E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 965 996 1.1E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 879 910 6.7E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1602 1633 5.7E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1688 1719 3.1E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2532 2559 4.9E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 507 538 9.3E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2739 2770 9.5E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1141 1172 4.7E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2249 2280 1.4E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 3015 3041 1.6E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1229 1260 2.4E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2946 2978 3.4E-6 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2877 2908 6.3E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1504 1535 4.0E-11 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1416 1447 4.2E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2434 2464 7.2E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1971 2002 6.6E-11 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2153 2184 4.5E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2067 2098 7.9E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2808 2834 5.7E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1328 1359 2.2E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1054 1084 3.4E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 781 812 2.0E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2601 2632 1.4E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 2851 2930 4.39E-9 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 1762 1843 5.65E-29 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 1394 1721 5.65E-29 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 1863 2235 1.88E-34 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 2915 3077 5.34E-13 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 2489 2722 7.85E-18 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 1116 1266 1.0E-11 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 623 819 5.1E-16 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 2558 2702 9.1E-14 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 302 471 6.6E-4 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 2025 2123 2.0E-7 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 1573 1770 1.2E-15 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 833 932 4.9E-4 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 934 1115 1.7E-16 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 2772 2903 5.5E-14 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 1382 1572 6.0E-15 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 2125 2332 4.2E-13 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 2904 3041 3.3E-13 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 2703 2771 8.9E-8 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Gene3D G3DSA:2.160.20.20 1306 1379 1.2E-5 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF103515 3321 3630 9.29E-46 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 2228 2516 1.98E-23 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 485 857 8.47E-22 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 782 811 4.4E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2671 2701 9.5E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1054 1083 5.9E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2533 2563 3.3E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2947 2977 3.4E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1689 1718 6.1E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1142 1171 4.5E-6 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2602 2632 3.1E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 694 723 5.1E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1417 1446 1.9E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2809 2839 3.5E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1230 1259 7.7E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2250 2279 1.5E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2740 2770 1.6E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1505 1534 4.2E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 3016 3046 3.5E-7 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1603 1632 3.9E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 605 634 0.21 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 880 909 1.2E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 508 537 6.5E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1884 1913 8.4E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2348 2377 0.04 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2154 2183 1.9E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1972 2001 2.5E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 966 995 8.6E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2436 2464 1.2E-6 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2878 2908 1.2E-9 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1329 1358 5.7E-6 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 2068 2097 1.6E-5 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 Pfam PF12951 Passenger-associated-transport-repeat 1785 1814 8.0E-8 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 1360 1469 1.07E-16 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 854 1174 1.07E-16 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS05000 4470c6993779f8ec16adc58b810a42bd 3630 SUPERFAMILY SSF51126 1208 1261 1.07E-16 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 250 40.587 T 25-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 Gene3D G3DSA:3.40.50.1820 2 252 1.9E-46 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 PANTHER PTHR10992 1 251 1.9E-90 T 25-04-2016 SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 SUPERFAMILY SSF53474 1 250 4.24E-42 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 249 8.9E-89 T 25-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 Pfam PF12697 Alpha/beta hydrolase family 12 244 7.1E-20 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS20860 14254e4a6cc2987e4100ef8c61d64ee1 259 PANTHER PTHR10992:SF812 1 251 1.9E-90 T 25-04-2016 SMD_RS00160 2f9fb99683463e22f5793a85cf314efd 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 137 1.7E-25 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS00160 2f9fb99683463e22f5793a85cf314efd 141 PANTHER PTHR30558:SF3 11 141 6.6E-36 T 25-04-2016 SMD_RS00160 2f9fb99683463e22f5793a85cf314efd 141 PANTHER PTHR30558 11 141 6.6E-36 T 25-04-2016 SMD_RS14600 3cbf39f18f06f7107b0e091524eba959 150 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 98 5.6E-17 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS14600 3cbf39f18f06f7107b0e091524eba959 150 SUPERFAMILY SSF69118 15 148 2.36E-41 T 25-04-2016 IPR029032 AhpD-like SMD_RS14600 3cbf39f18f06f7107b0e091524eba959 150 Gene3D G3DSA:1.20.1290.10 7 144 5.6E-47 T 25-04-2016 IPR029032 AhpD-like SMD_RS14600 3cbf39f18f06f7107b0e091524eba959 150 PANTHER PTHR34846:SF2 30 140 1.1E-13 T 25-04-2016 SMD_RS14600 3cbf39f18f06f7107b0e091524eba959 150 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 33 81 1.0E-14 T 25-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS14600 3cbf39f18f06f7107b0e091524eba959 150 PANTHER PTHR34846 30 140 1.1E-13 T 25-04-2016 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 207 231 1.0E-40 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 1.0E-40 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 1.0E-40 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 1.0E-40 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 1.0E-40 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 1.0E-40 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 Pfam PF01578 Cytochrome C assembly protein 45 187 1.4E-27 T 25-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 48 227 1.1E-63 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SMD_RS14810 5548c7413a46ad0de18eaea516e48627 256 PANTHER PTHR30071 7 227 1.7E-66 T 25-04-2016 SMD_RS02070 d633d10599449f80f6a47f196505d47c 297 PANTHER PTHR11048 5 296 3.6E-78 T 25-04-2016 SMD_RS02070 d633d10599449f80f6a47f196505d47c 297 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 25-04-2016 IPR030470 UbiA prenyltransferase conserved site SMD_RS02070 d633d10599449f80f6a47f196505d47c 297 Pfam PF01040 UbiA prenyltransferase family 21 266 1.0E-59 T 25-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SMD_RS02070 d633d10599449f80f6a47f196505d47c 297 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.481 T 25-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SMD_RS02070 d633d10599449f80f6a47f196505d47c 297 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 7 291 1.6E-90 T 25-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 Hamap MF_00743 Fumarate hydratase class II [fumC]. 9 464 78.486 T 25-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 Gene3D G3DSA:1.10.40.30 420 466 2.3E-20 T 25-04-2016 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PANTHER PTHR11444:SF22 1 458 8.2E-294 T 25-04-2016 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 Pfam PF00206 Lyase 17 344 6.3E-100 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PANTHER PTHR11444 1 458 8.2E-294 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 Gene3D G3DSA:1.10.275.10 8 140 1.8E-55 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 Pfam PF10415 Fumarase C C-terminus 410 462 1.2E-19 T 25-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 SUPERFAMILY SSF48557 9 462 2.95E-143 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00145 Argininosuccinate lyase family signature 135 157 3.0E-5 T 25-04-2016 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 3.0E-5 T 25-04-2016 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 3.0E-5 T 25-04-2016 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 Gene3D G3DSA:1.20.200.10 141 419 2.6E-89 T 25-04-2016 SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 5.2E-31 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 5.2E-31 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 5.2E-31 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14445 08e3546ac17e860528a722fbc15792c2 475 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 5.2E-31 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS21265 006d370cbdc511836deabc17e6fa909a 784 SUPERFAMILY SSF82866 241 408 1.7E-20 T 25-04-2016 SMD_RS21265 006d370cbdc511836deabc17e6fa909a 784 SUPERFAMILY SSF82866 615 776 3.27E-20 T 25-04-2016 SMD_RS21265 006d370cbdc511836deabc17e6fa909a 784 Gene3D G3DSA:1.20.1640.10 235 408 4.0E-16 T 25-04-2016 SMD_RS21265 006d370cbdc511836deabc17e6fa909a 784 Gene3D G3DSA:1.20.1640.10 630 774 4.9E-11 T 25-04-2016 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 Gene3D G3DSA:3.40.190.10 90 179 5.2E-24 T 25-04-2016 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 Gene3D G3DSA:3.40.190.10 180 273 1.5E-26 T 25-04-2016 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 PANTHER PTHR30346 1 301 2.1E-88 T 25-04-2016 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 SUPERFAMILY SSF46785 4 88 3.29E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.3E-24 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.8E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.8E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.8E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 Gene3D G3DSA:1.10.10.10 2 84 5.5E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 Pfam PF03466 LysR substrate binding domain 89 299 9.3E-44 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS01190 d559b11eef26012970231c86b42b1f19 302 SUPERFAMILY SSF53850 90 301 5.79E-41 T 25-04-2016 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 25-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 4.4E-68 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 PANTHER PTHR18937 428 1160 0.0 T 25-04-2016 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 PANTHER PTHR18937 1 394 0.0 T 25-04-2016 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 Gene3D G3DSA:3.40.50.300 1024 1161 1.2E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 Gene3D G3DSA:3.40.50.300 731 732 1.2E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 Gene3D G3DSA:3.40.50.300 1 166 1.2E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 PIRSF PIRSF005719 1 1165 1.2E-269 T 25-04-2016 IPR024704 Structural maintenance of chromosomes protein SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 23.22 T 25-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 SUPERFAMILY SSF57997 645 857 2.94E-6 T 25-04-2016 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 PANTHER PTHR18937:SF261 428 1160 0.0 T 25-04-2016 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 PANTHER PTHR18937:SF261 1 394 0.0 T 25-04-2016 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 SUPERFAMILY SSF75553 483 668 7.72E-8 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 SUPERFAMILY SSF52540 1 217 1.64E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 SUPERFAMILY SSF52540 1056 1140 1.64E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14230 1be0a94a1078a1ba4076414cfa6111d0 1167 SMART SM00968 521 619 0.0041 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SMD_RS19995 a882d046f41dd1014299c4c1140215b5 110 PANTHER PTHR36511:SF3 12 106 4.5E-28 T 25-04-2016 SMD_RS19995 a882d046f41dd1014299c4c1140215b5 110 SUPERFAMILY SSF47413 54 100 1.92E-9 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS19995 a882d046f41dd1014299c4c1140215b5 110 Gene3D G3DSA:1.10.260.40 54 108 4.0E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS19995 a882d046f41dd1014299c4c1140215b5 110 PANTHER PTHR36511 12 106 4.5E-28 T 25-04-2016 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 Gene3D G3DSA:3.40.50.1100 109 187 7.0E-21 T 25-04-2016 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 SUPERFAMILY SSF53686 13 398 7.2E-144 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 Gene3D G3DSA:3.40.50.1100 188 399 7.1E-95 T 25-04-2016 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 PANTHER PTHR10314 17 401 1.8E-222 T 25-04-2016 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 PIRSF PIRSF001413 5 403 5.8E-158 T 25-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 25-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 51.313 T 25-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.2E-186 T 25-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 388 2.8E-47 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS15540 2d8b583990f1abdd46089c8f14816261 405 PANTHER PTHR10314:SF3 17 401 1.8E-222 T 25-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 322 1.3E-46 T 25-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 SUPERFAMILY SSF48179 182 336 9.52E-51 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 SUPERFAMILY SSF51735 7 183 5.75E-52 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.0E-42 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.0E-42 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 1.0E-42 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 1.0E-42 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 1.0E-42 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.0E-42 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 Gene3D G3DSA:3.40.50.720 5 186 5.3E-63 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 4.5E-52 T 25-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 Gene3D G3DSA:1.10.1040.10 187 329 4.2E-51 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PIRSF PIRSF000114 1 335 7.4E-97 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 PANTHER PTHR11728 7 341 1.6E-134 T 25-04-2016 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS00785 626f1013e379587ff53c64857e81ccaf 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 39.133 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 PANTHER PTHR34824 1 351 3.1E-110 T 25-04-2016 SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 SUPERFAMILY SSF46785 8 88 2.99E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 PIRSF PIRSF005485 5 345 1.4E-108 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 7 335 27.634 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 Gene3D G3DSA:1.10.10.10 7 88 4.3E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 SUPERFAMILY SSF55781 77 343 1.12E-59 T 25-04-2016 IPR029016 GAF domain-like SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 Pfam PF01628 HrcA protein C terminal domain 110 328 1.7E-56 T 25-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 8 79 7.1E-6 T 25-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 Gene3D G3DSA:3.30.450.40 182 343 1.3E-39 T 25-04-2016 IPR029016 GAF domain-like SMD_RS09475 224e856fd3584ec4bf39416ab8109355 354 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 340 1.4E-98 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SMD_RS05645 a17716b88a65216adfe5b507be2d094e 216 Pfam PF01797 Transposase IS200 like 14 122 3.1E-18 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS05645 a17716b88a65216adfe5b507be2d094e 216 SMART SM01321 9 124 2.1E-43 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS05645 a17716b88a65216adfe5b507be2d094e 216 PANTHER PTHR34322 2 185 1.6E-36 T 25-04-2016 SMD_RS05645 a17716b88a65216adfe5b507be2d094e 216 Gene3D G3DSA:3.30.70.1290 15 127 8.2E-14 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS05645 a17716b88a65216adfe5b507be2d094e 216 PANTHER PTHR34322:SF1 2 185 1.6E-36 T 25-04-2016 SMD_RS05645 a17716b88a65216adfe5b507be2d094e 216 SUPERFAMILY SSF143422 3 127 1.57E-31 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 SUPERFAMILY SSF51735 149 313 7.98E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 SMART SM00829 11 343 7.2E-6 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 145 4.7E-27 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 Pfam PF00107 Zinc-binding dehydrogenase 186 309 3.7E-20 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 Gene3D G3DSA:3.40.50.720 178 293 1.2E-21 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 PANTHER PTHR11695 16 350 1.5E-160 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 PANTHER PTHR11695:SF608 16 350 1.5E-160 T 25-04-2016 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 Gene3D G3DSA:3.90.180.10 5 177 1.1E-64 T 25-04-2016 IPR011032 GroES-like SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 SUPERFAMILY SSF50129 8 173 1.83E-53 T 25-04-2016 IPR011032 GroES-like SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 25-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SMD_RS18585 0917b7bd08a8403c8280e4412d76f4ec 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 SUPERFAMILY SSF55347 169 359 2.94E-7 T 25-04-2016 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 PANTHER PTHR22604 29 267 2.7E-85 T 25-04-2016 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 PANTHER PTHR22604 287 440 2.7E-85 T 25-04-2016 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 Gene3D G3DSA:3.30.360.10 176 414 4.8E-7 T 25-04-2016 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 32 133 2.8E-8 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 SUPERFAMILY SSF51735 23 191 1.7E-30 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 PANTHER PTHR22604:SF2 29 267 2.7E-85 T 25-04-2016 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 PANTHER PTHR22604:SF2 287 440 2.7E-85 T 25-04-2016 SMD_RS20775 4565ff11ac9a5019d88fa27d2f381b92 451 Gene3D G3DSA:3.40.50.720 28 175 6.2E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS11100 f76d2f08359e7e1265036e37a1676cd7 212 Gene3D G3DSA:2.50.20.10 29 211 6.7E-54 T 25-04-2016 SMD_RS11100 f76d2f08359e7e1265036e37a1676cd7 212 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 18 209 2.9E-21 T 25-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SMD_RS11100 f76d2f08359e7e1265036e37a1676cd7 212 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 202 3.1E-49 T 25-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SMD_RS11100 f76d2f08359e7e1265036e37a1676cd7 212 PANTHER PTHR35869 1 212 7.8E-51 T 25-04-2016 SMD_RS11100 f76d2f08359e7e1265036e37a1676cd7 212 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 212 29.861 T 25-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SMD_RS11100 f76d2f08359e7e1265036e37a1676cd7 212 SUPERFAMILY SSF89392 28 211 9.42E-44 T 25-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SMD_RS04545 818173ce0d045e8678aa0f0170ea22e8 206 SUPERFAMILY SSF50475 4 193 2.6E-50 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS04545 818173ce0d045e8678aa0f0170ea22e8 206 PANTHER PTHR33798:SF4 3 205 2.9E-80 T 25-04-2016 SMD_RS04545 818173ce0d045e8678aa0f0170ea22e8 206 Gene3D G3DSA:2.30.110.10 14 188 2.2E-66 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS04545 818173ce0d045e8678aa0f0170ea22e8 206 PANTHER PTHR33798 3 205 2.9E-80 T 25-04-2016 SMD_RS04545 818173ce0d045e8678aa0f0170ea22e8 206 Pfam PF01613 Flavin reductase like domain 27 167 3.5E-18 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SMD_RS04545 818173ce0d045e8678aa0f0170ea22e8 206 SMART SM00903 25 176 9.1E-11 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 526 4.5E-223 T 25-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 PANTHER PTHR13847:SF214 1 554 3.0E-184 T 25-04-2016 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 SUPERFAMILY SSF51905 29 367 1.97E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 PANTHER PTHR13847 1 554 3.0E-184 T 25-04-2016 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 524 3.8E-198 T 25-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 526 52.133 T 25-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 Gene3D G3DSA:3.50.50.60 182 362 5.4E-21 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS06055 1f5c10d80698d02797701a78d44fe678 562 Gene3D G3DSA:3.50.50.60 41 107 5.4E-21 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 SMART SM00226 1 150 1.1E-40 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 1.3E-24 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.3E-24 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 1.3E-24 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.3E-24 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 PANTHER PTHR11717 1 143 1.5E-37 T 25-04-2016 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 5.3E-35 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 PANTHER PTHR11717:SF7 1 143 1.5E-37 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 Gene3D G3DSA:3.40.50.270 1 151 3.9E-46 T 25-04-2016 SMD_RS07680 83576eb53af7869d4e5288afcedd1ff3 162 SUPERFAMILY SSF52788 1 151 4.19E-45 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.4E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.4E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.4E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 SUPERFAMILY SSF46785 1 116 2.39E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 SUPERFAMILY SSF53850 97 288 5.16E-39 T 25-04-2016 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 Gene3D G3DSA:3.40.190.10 189 259 4.4E-12 T 25-04-2016 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 PANTHER PTHR30126 3 274 1.2E-105 T 25-04-2016 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 PANTHER PTHR30126:SF36 3 274 1.2E-105 T 25-04-2016 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 Gene3D G3DSA:1.10.10.10 3 86 2.2E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.7E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 Pfam PF03466 LysR substrate binding domain 96 287 4.4E-41 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS09640 3944df60d26d85883e040a3de5da88b2 291 Gene3D G3DSA:3.40.190.10 97 188 2.4E-17 T 25-04-2016 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 Hamap MF_00167 Carbon storage regulator [csrA]. 1 67 21.067 T 25-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 SUPERFAMILY SSF117130 1 53 1.7E-20 T 25-04-2016 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 25-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 Pfam PF02599 Global regulator protein family 1 52 6.5E-27 T 25-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 PANTHER PTHR34984 1 57 9.6E-30 T 25-04-2016 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 PANTHER PTHR34984:SF1 1 57 9.6E-30 T 25-04-2016 SMD_RS08895 d7313fed50226171bdb0d4b4d23845b1 67 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 9.8E-28 T 25-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 97 415 3.3E-124 T 25-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 Gene3D G3DSA:1.20.1250.20 238 415 7.6E-9 T 25-04-2016 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 SUPERFAMILY SSF103473 10 419 4.58E-34 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 PANTHER PTHR23514:SF10 193 422 2.1E-175 T 25-04-2016 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 PANTHER PTHR23514:SF10 12 175 2.1E-175 T 25-04-2016 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 PANTHER PTHR23514 193 422 2.1E-175 T 25-04-2016 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 PANTHER PTHR23514 12 175 2.1E-175 T 25-04-2016 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 Gene3D G3DSA:1.20.1250.20 17 223 8.0E-13 T 25-04-2016 SMD_RS18730 a150e780289ae7a639d7ab00ba295eec 429 Pfam PF07690 Major Facilitator Superfamily 22 381 2.3E-16 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 Gene3D G3DSA:3.40.50.720 1 250 1.9E-80 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-6 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.2E-6 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 2.1E-60 T 25-04-2016 SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0097 T 25-04-2016 SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PANTHER PTHR24322 156 187 9.6E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PANTHER PTHR24322 10 139 9.6E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 SUPERFAMILY SSF51735 1 250 9.57E-77 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.6E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.6E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS15140 2c9a5248c46bbf6eb547980cf4cbfb02 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.02 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 Gene3D G3DSA:2.40.50.100 20 82 4.7E-30 T 25-04-2016 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 8.4E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-18 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 25-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 PANTHER PTHR15893 1 86 5.2E-47 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 SUPERFAMILY SSF110324 2 81 1.12E-33 T 25-04-2016 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.2E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.2E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.2E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06240 a22599285ed0e251dbb4afee69927642 87 Pfam PF01016 Ribosomal L27 protein 2 82 3.2E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 25-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Pfam PF13368 Topoisomerase C-terminal repeat 657 706 1.2E-14 T 25-04-2016 IPR025589 Topoisomerase C-terminal repeat SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Pfam PF13368 Topoisomerase C-terminal repeat 594 656 1.9E-14 T 25-04-2016 IPR025589 Topoisomerase C-terminal repeat SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Pfam PF13368 Topoisomerase C-terminal repeat 717 762 2.1E-11 T 25-04-2016 IPR025589 Topoisomerase C-terminal repeat SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Gene3D G3DSA:3.40.50.140 1 136 5.6E-44 T 25-04-2016 IPR006171 Toprim domain SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.1E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.1E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.1E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.1E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.1E-36 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Gene3D G3DSA:1.10.460.10 137 189 1.4E-60 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Gene3D G3DSA:1.10.460.10 465 576 1.4E-60 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Gene3D G3DSA:2.70.20.10 190 325 2.0E-31 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Gene3D G3DSA:2.70.20.10 328 464 1.6E-37 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 SUPERFAMILY SSF56712 3 602 6.67E-188 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 SMART SM00436 108 196 9.5E-45 T 25-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 616 2.5E-229 T 25-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PANTHER PTHR11390:SF27 1 613 0.0 T 25-04-2016 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Pfam PF01751 Toprim domain 5 117 1.2E-26 T 25-04-2016 IPR006171 Toprim domain SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 683 53.266 T 25-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 SMART SM00437 252 525 1.1E-116 T 25-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 SMART SM00493 3 103 1.2E-31 T 25-04-2016 IPR006171 Toprim domain SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 PANTHER PTHR11390 1 613 0.0 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMD_RS19675 ff6941c56ad563753d4c20968a165404 830 Pfam PF01131 DNA topoisomerase 133 562 1.2E-130 T 25-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 Gene3D G3DSA:1.10.10.10 4 84 2.6E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 PANTHER PTHR30537 1 303 1.5E-104 T 25-04-2016 SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 SUPERFAMILY SSF53850 89 299 6.33E-42 T 25-04-2016 SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 SUPERFAMILY SSF46785 4 112 7.0E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 Gene3D G3DSA:3.40.190.10 92 175 4.9E-24 T 25-04-2016 SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 Pfam PF03466 LysR substrate binding domain 89 296 2.3E-38 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 PANTHER PTHR30537:SF17 1 303 1.5E-104 T 25-04-2016 SMD_RS01310 b3c85b40fa210635295ca782fb8c41ac 303 Gene3D G3DSA:3.40.190.10 176 259 1.7E-16 T 25-04-2016 SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 PANTHER PTHR30097 51 391 2.0E-54 T 25-04-2016 SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 SUPERFAMILY SSF111369 98 265 1.83E-16 T 25-04-2016 SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 PANTHER PTHR30097:SF4 51 391 2.0E-54 T 25-04-2016 SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 72 384 1.2E-38 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 290 5.2E-19 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 Gene3D G3DSA:2.40.50.100 101 131 2.1E-12 T 25-04-2016 SMD_RS00890 b1471025e19a0262aa86d7cb5c00e23e 391 Gene3D G3DSA:2.40.50.100 203 235 2.1E-12 T 25-04-2016 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 Gene3D G3DSA:1.10.1370.10 142 348 2.5E-128 T 25-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 Gene3D G3DSA:1.10.1370.10 503 675 2.5E-128 T 25-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 PANTHER PTHR11804:SF8 4 675 4.1E-298 T 25-04-2016 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 Gene3D G3DSA:3.40.390.10 359 502 5.3E-55 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 PANTHER PTHR11804 4 675 4.1E-298 T 25-04-2016 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 SUPERFAMILY SSF55486 5 674 2.44E-191 T 25-04-2016 SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 Gene3D G3DSA:1.20.1050.40 13 139 2.9E-18 T 25-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SMD_RS19045 4006fc7a649a946d694020c0efdf6aff 676 Pfam PF01432 Peptidase family M3 228 674 4.5E-139 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMD_RS06580 9234828ae93b93630d166d0f8d810251 238 SUPERFAMILY SSF56784 3 210 6.83E-40 T 25-04-2016 IPR023214 HAD-like domain SMD_RS06580 9234828ae93b93630d166d0f8d810251 238 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 181 8.7E-29 T 25-04-2016 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 SMD_RS06580 9234828ae93b93630d166d0f8d810251 238 Gene3D G3DSA:3.40.50.1000 5 20 2.8E-12 T 25-04-2016 IPR023214 HAD-like domain SMD_RS06580 9234828ae93b93630d166d0f8d810251 238 Gene3D G3DSA:3.40.50.1000 69 184 2.8E-12 T 25-04-2016 IPR023214 HAD-like domain SMD_RS06580 9234828ae93b93630d166d0f8d810251 238 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 173 1.7E-21 T 25-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SMD_RS06580 9234828ae93b93630d166d0f8d810251 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 170 1.2E-15 T 25-04-2016 SMD_RS17465 2f4b2a6e704b62dde0eb3c3ae7cc9ca0 203 Gene3D G3DSA:3.40.50.300 3 199 1.3E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17465 2f4b2a6e704b62dde0eb3c3ae7cc9ca0 203 Pfam PF01121 Dephospho-CoA kinase 4 182 2.1E-56 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMD_RS17465 2f4b2a6e704b62dde0eb3c3ae7cc9ca0 203 SUPERFAMILY SSF52540 4 200 1.14E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17465 2f4b2a6e704b62dde0eb3c3ae7cc9ca0 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 191 4.2E-48 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMD_RS17465 2f4b2a6e704b62dde0eb3c3ae7cc9ca0 203 PANTHER PTHR10695 1 198 4.5E-66 T 25-04-2016 SMD_RS17465 2f4b2a6e704b62dde0eb3c3ae7cc9ca0 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 196 25.798 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 Gene3D G3DSA:1.10.10.10 7 79 7.0E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 Pfam PF07729 FCD domain 88 210 9.3E-27 T 25-04-2016 IPR011711 GntR, C-terminal SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 Gene3D G3DSA:1.20.120.530 81 222 7.0E-28 T 25-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 SMART SM00895 88 212 1.9E-18 T 25-04-2016 IPR011711 GntR, C-terminal SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 PANTHER PTHR11751:SF362 15 104 2.8E-39 T 25-04-2016 SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 SUPERFAMILY SSF46785 10 82 2.54E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 SUPERFAMILY SSF48008 84 217 1.86E-23 T 25-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 PANTHER PTHR11751 15 104 2.8E-39 T 25-04-2016 SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.7E-17 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 SMART SM00345 20 78 1.5E-15 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.2E-5 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS06005 ac4a29f7724b3516ed979395062f6ee4 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.2E-5 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 Gene3D G3DSA:3.40.50.2300 71 192 5.3E-21 T 25-04-2016 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 20 65 7.3E-19 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 30 40 1.8E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 1.8E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 SUPERFAMILY SSF53822 79 347 9.76E-57 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 PANTHER PTHR30146 18 347 3.7E-187 T 25-04-2016 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 Gene3D G3DSA:3.40.50.2300 193 324 5.0E-44 T 25-04-2016 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 Pfam PF13377 Periplasmic binding protein-like domain 188 346 3.5E-33 T 25-04-2016 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 SMART SM00354 18 88 2.4E-24 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 SUPERFAMILY SSF47413 18 76 2.16E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 ProSitePatterns PS00356 LacI-type HTH domain signature. 21 39 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 PANTHER PTHR30146:SF52 18 347 3.7E-187 T 25-04-2016 SMD_RS00265 1374864fb17b4adc85120d5e96d78c0c 351 Gene3D G3DSA:1.10.260.40 19 70 2.8E-23 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS06820 7270b125f101ef8a403f6f994606a8a0 315 PANTHER PTHR22911:SF71 5 315 3.2E-143 T 25-04-2016 SMD_RS06820 7270b125f101ef8a403f6f994606a8a0 315 PANTHER PTHR22911 5 315 3.2E-143 T 25-04-2016 SMD_RS06820 7270b125f101ef8a403f6f994606a8a0 315 Pfam PF00892 EamA-like transporter family 16 138 1.3E-9 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS06820 7270b125f101ef8a403f6f994606a8a0 315 Pfam PF00892 EamA-like transporter family 147 289 4.1E-16 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS06820 7270b125f101ef8a403f6f994606a8a0 315 SUPERFAMILY SSF103481 44 139 4.05E-6 T 25-04-2016 SMD_RS06820 7270b125f101ef8a403f6f994606a8a0 315 SUPERFAMILY SSF103481 203 293 9.68E-10 T 25-04-2016 SMD_RS16330 7721f6ee2d8496ed359a503d18f8fbc5 654 SUPERFAMILY SSF55486 342 646 5.37E-191 T 25-04-2016 SMD_RS16330 7721f6ee2d8496ed359a503d18f8fbc5 654 SUPERFAMILY SSF55486 41 312 5.37E-191 T 25-04-2016 SMD_RS16330 7721f6ee2d8496ed359a503d18f8fbc5 654 Pfam PF01401 Angiotensin-converting enzyme 41 645 7.8E-191 T 25-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SMD_RS16330 7721f6ee2d8496ed359a503d18f8fbc5 654 PANTHER PTHR10514 340 647 7.8E-249 T 25-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SMD_RS16330 7721f6ee2d8496ed359a503d18f8fbc5 654 PANTHER PTHR10514 43 310 7.8E-249 T 25-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 SUPERFAMILY SSF53335 262 375 1.12E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 SUPERFAMILY SSF53335 143 220 1.12E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Gene3D G3DSA:3.40.50.150 449 710 8.5E-65 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 711 30.358 T 25-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 PANTHER PTHR18895 405 672 1.5E-102 T 25-04-2016 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 SUPERFAMILY SSF53335 400 707 1.27E-57 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Pfam PF01170 Putative RNA methylase family UPF0020 161 372 3.0E-44 T 25-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 507 662 1.1E-16 T 25-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 SMART SM00981 55 153 3.4E-20 T 25-04-2016 IPR004114 THUMP domain GO:0003723 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Gene3D G3DSA:3.40.50.150 259 374 2.7E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Gene3D G3DSA:3.40.50.150 144 217 2.7E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 PANTHER PTHR18895:SF62 405 672 1.5E-102 T 25-04-2016 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 25-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 Pfam PF02926 THUMP domain 30 152 3.0E-10 T 25-04-2016 IPR004114 THUMP domain GO:0003723 SMD_RS07305 7b6bb48316019b76c5a9d3c7bebbfd07 712 PIRSF PIRSF037618 1 711 1.5E-276 T 25-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Gene3D G3DSA:2.40.50.140 449 530 1.6E-19 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Gene3D G3DSA:2.40.50.140 364 445 1.9E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PANTHER PTHR10724:SF6 1 515 2.3E-257 T 25-04-2016 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SUPERFAMILY SSF50249 344 441 4.4E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Pfam PF00575 S1 RNA binding domain 277 348 1.3E-22 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Pfam PF00575 S1 RNA binding domain 104 172 1.8E-10 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Pfam PF00575 S1 RNA binding domain 18 87 2.6E-4 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Pfam PF00575 S1 RNA binding domain 362 435 1.3E-19 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Pfam PF00575 S1 RNA binding domain 451 521 2.5E-14 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Pfam PF00575 S1 RNA binding domain 189 261 1.5E-22 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SUPERFAMILY SSF50249 104 186 2.24E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Gene3D G3DSA:2.40.50.140 103 173 5.5E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SUPERFAMILY SSF50249 256 359 2.76E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SUPERFAMILY SSF50249 434 537 6.79E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SUPERFAMILY SSF50249 1 113 1.25E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Gene3D G3DSA:2.40.50.140 176 265 2.2E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SMART SM00316 20 88 6.7E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SMART SM00316 104 172 7.1E-9 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SMART SM00316 191 261 1.3E-28 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SMART SM00316 450 521 8.6E-17 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SMART SM00316 363 435 5.4E-21 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SMART SM00316 276 348 1.2E-27 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PANTHER PTHR10724 1 515 2.3E-257 T 25-04-2016 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PIRSF PIRSF002111 1 535 1.6E-211 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 7.3E-210 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 127 144 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 40 54 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 109 125 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 156 176 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 213 234 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 331 349 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 85 104 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 291 310 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 PRINTS PR00681 Ribosomal protein S1 signature 22 40 2.02E-86 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Gene3D G3DSA:2.40.50.140 281 363 2.6E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 Gene3D G3DSA:2.40.50.140 22 102 7.8E-10 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09710 f2eb6ebd07cb653df7875dc2cea22ecc 561 SUPERFAMILY SSF50249 191 277 1.04E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:1.10.1030.10 400 539 2.4E-50 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.40.50.20 4 108 4.3E-44 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SUPERFAMILY SSF56059 674 939 5.66E-103 T 25-04-2016 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.40.50.1380 945 1078 1.8E-41 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SUPERFAMILY SSF52335 942 1077 9.42E-40 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PANTHER PTHR11405 1 1075 0.0 T 25-04-2016 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SMART SM01096 425 548 1.8E-73 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.519 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.30.1490.20 687 745 8.5E-25 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.30.1490.20 142 200 1.4E-23 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.6E-71 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 1.1E-39 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.306 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Pfam PF02142 MGS-like domain 963 1048 3.3E-18 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.40.50.20 540 663 5.6E-60 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 3.8E-39 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PANTHER PTHR11405:SF5 1 1075 0.0 T 25-04-2016 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.1E-65 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SUPERFAMILY SSF48108 396 555 2.88E-51 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SUPERFAMILY SSF52440 1 127 2.45E-49 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SUPERFAMILY SSF56059 128 401 7.25E-108 T 25-04-2016 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.30.470.20 746 940 1.8E-79 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 Gene3D G3DSA:3.30.470.20 201 399 5.4E-76 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SUPERFAMILY SSF52440 558 676 6.19E-50 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS10530 8f9e5e450a8ad3c2869aab415854175c 1080 SMART SM00851 962 1048 5.6E-32 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 Hamap MF_00045 Oligoribonuclease [orn]. 6 184 41.19 T 25-04-2016 IPR022894 Oligoribonuclease GO:0016788 SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 Pfam PF00929 Exonuclease 12 173 3.0E-29 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 PANTHER PTHR11046:SF1 1 181 2.2E-113 T 25-04-2016 SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 PANTHER PTHR11046 1 181 2.2E-113 T 25-04-2016 SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 Gene3D G3DSA:3.30.420.10 8 179 5.5E-69 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 SMART SM00479 10 183 1.7E-16 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS13685 a6d7f31c14626c2b64cc9ff78b6d662b 190 SUPERFAMILY SSF53098 8 181 2.66E-45 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 SUPERFAMILY SSF158791 13 136 1.96E-30 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Gene3D G3DSA:3.10.580.10 130 263 6.1E-15 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 9.3E-85 T 25-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Pfam PF00571 CBS domain 139 194 0.0028 T 25-04-2016 IPR000644 CBS domain SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Pfam PF00571 CBS domain 221 257 5.3E-4 T 25-04-2016 IPR000644 CBS domain SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 SUPERFAMILY SSF161093 280 451 7.85E-51 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 SMART SM00924 36 139 7.1E-38 T 25-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Pfam PF01769 Divalent cation transporter 323 445 4.8E-28 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Pfam PF03448 MgtE intracellular N domain 37 137 4.7E-28 T 25-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 PANTHER PTHR11911 1 422 2.7E-63 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Gene3D G3DSA:1.25.60.10 10 129 1.8E-26 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 SUPERFAMILY SSF54631 139 277 1.19E-25 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 PANTHER PTHR11911:SF99 1 422 2.7E-63 T 25-04-2016 SMD_RS05405 360723cacabea1a7c1a0466281eeb467 453 Gene3D G3DSA:1.10.357.20 280 451 4.7E-54 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 PANTHER PTHR10937:SF8 1 341 5.0E-112 T 25-04-2016 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 Gene3D G3DSA:3.40.50.10490 9 172 1.6E-31 T 25-04-2016 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 SUPERFAMILY SSF53697 11 340 2.69E-75 T 25-04-2016 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 Pfam PF01380 SIS domain 49 170 2.3E-21 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 Pfam PF01380 SIS domain 204 286 1.3E-12 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 PANTHER PTHR10937 1 341 5.0E-112 T 25-04-2016 SMD_RS18720 65b3ecc99a3801278ca617312b020ae3 342 Gene3D G3DSA:3.40.50.10490 185 342 1.8E-37 T 25-04-2016 SMD_RS05590 bdea583fbf128c590b780d63d40b2f03 267 Pfam PF10670 Domain of unknown function (DUF4198) 19 242 1.5E-66 T 25-04-2016 IPR019613 Protein of unknown function DUF4198 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF82697 13 160 2.09E-31 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF109736 170 224 8.89E-19 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1054 1305 3.1E-100 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Gene3D G3DSA:3.30.1330.10 653 818 5.3E-14 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Gene3D G3DSA:3.30.1330.10 215 424 2.9E-35 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF55326 225 427 9.42E-52 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 PANTHER PTHR10099:SF5 12 1306 0.0 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF52317 1051 1305 7.29E-92 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Pfam PF02769 AIR synthase related protein, C-terminal domain 837 974 1.3E-9 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 7.1E-31 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 16 1304 0.0 T 25-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 13 1306 20.393 T 25-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF56042 433 663 7.78E-52 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF56042 831 1047 1.5E-48 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SUPERFAMILY SSF55326 628 824 1.67E-68 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 PANTHER PTHR10099 12 1306 0.0 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 SMART SM01211 1054 1305 1.4E-140 T 25-04-2016 SMD_RS03135 e50c53c813fa94ab023c731925cc894e 1306 Gene3D G3DSA:3.40.50.880 1055 1278 8.6E-15 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS11140 52969aed160205f684c48093bcf468f0 253 PANTHER PTHR24220 6 251 8.7E-87 T 25-04-2016 SMD_RS11140 52969aed160205f684c48093bcf468f0 253 Pfam PF00005 ABC transporter 20 165 9.0E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS11140 52969aed160205f684c48093bcf468f0 253 Gene3D G3DSA:3.40.50.300 2 234 5.6E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11140 52969aed160205f684c48093bcf468f0 253 SMART SM00382 29 213 6.3E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11140 52969aed160205f684c48093bcf468f0 253 SUPERFAMILY SSF52540 4 232 2.19E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11140 52969aed160205f684c48093bcf468f0 253 PANTHER PTHR24220:SF558 6 251 8.7E-87 T 25-04-2016 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 SUPERFAMILY SSF52172 3 125 2.28E-42 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 SUPERFAMILY SSF46894 127 225 2.66E-30 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 Pfam PF00072 Response regulator receiver domain 5 117 7.3E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 Gene3D G3DSA:1.10.10.10 128 226 1.4E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 PANTHER PTHR26402:SF576 3 225 4.4E-135 T 25-04-2016 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.2E-26 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 SMART SM00862 150 225 8.3E-29 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 1.8E-112 T 25-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 SMART SM00448 3 116 1.2E-42 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 Gene3D G3DSA:3.40.50.2300 3 127 9.1E-41 T 25-04-2016 SMD_RS04505 916a35e524dc418361d66d9758ac278f 229 PANTHER PTHR26402 3 225 4.4E-135 T 25-04-2016 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 25-04-2016 IPR019926 Ribosomal protein L3, conserved site SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 PANTHER PTHR11229 8 213 2.2E-109 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 Pfam PF00297 Ribosomal protein L3 103 188 4.4E-15 T 25-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 SUPERFAMILY SSF50447 5 215 7.24E-79 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 211 3.7E-86 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 Gene3D G3DSA:2.40.30.10 8 37 1.5E-8 T 25-04-2016 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 Gene3D G3DSA:2.40.30.10 165 211 1.5E-8 T 25-04-2016 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 Gene3D G3DSA:4.10.960.10 82 164 3.1E-33 T 25-04-2016 SMD_RS04170 6ce5e8e696a2ba5646003012a6b5b4b7 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 39.454 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS13565 e3f3040ffb4d83dd929a060f241e4c2f 126 Pfam PF00072 Response regulator receiver domain 9 62 5.1E-7 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13565 e3f3040ffb4d83dd929a060f241e4c2f 126 PANTHER PTHR26402 7 121 2.0E-18 T 25-04-2016 SMD_RS13565 e3f3040ffb4d83dd929a060f241e4c2f 126 SUPERFAMILY SSF52172 5 122 1.99E-18 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS13565 e3f3040ffb4d83dd929a060f241e4c2f 126 Gene3D G3DSA:3.40.50.2300 5 123 1.5E-14 T 25-04-2016 SMD_RS13565 e3f3040ffb4d83dd929a060f241e4c2f 126 SMART SM00448 7 115 1.6E-4 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13565 e3f3040ffb4d83dd929a060f241e4c2f 126 PANTHER PTHR26402:SF551 7 121 2.0E-18 T 25-04-2016 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 SUPERFAMILY SSF103473 12 219 5.84E-33 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 SUPERFAMILY SSF103473 282 491 5.84E-33 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 Gene3D G3DSA:1.20.1250.20 304 490 7.9E-14 T 25-04-2016 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 Gene3D G3DSA:1.20.1250.20 12 208 1.3E-22 T 25-04-2016 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 Pfam PF07690 Major Facilitator Superfamily 18 451 1.1E-16 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 PANTHER PTHR19432 1 226 3.4E-97 T 25-04-2016 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 PANTHER PTHR19432 282 493 3.4E-97 T 25-04-2016 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 PANTHER PTHR19432:SF35 1 226 3.4E-97 T 25-04-2016 SMD_RS05780 0ca825f42e1606d30dd8b7f1f523aaf6 495 PANTHER PTHR19432:SF35 282 493 3.4E-97 T 25-04-2016 SMD_RS11620 a01dacc78a43f45d2bd47e0cb67cedf6 130 SUPERFAMILY SSF52172 9 121 1.41E-17 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11620 a01dacc78a43f45d2bd47e0cb67cedf6 130 Gene3D G3DSA:3.40.50.2300 8 121 3.4E-16 T 25-04-2016 SMD_RS11620 a01dacc78a43f45d2bd47e0cb67cedf6 130 SMART SM00448 10 116 1.6E-4 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11620 a01dacc78a43f45d2bd47e0cb67cedf6 130 Pfam PF00072 Response regulator receiver domain 13 117 1.2E-7 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 Pfam PF00005 ABC transporter 380 531 3.1E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 SUPERFAMILY SSF52540 350 601 4.83E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 Gene3D G3DSA:1.20.1560.10 29 332 3.8E-40 T 25-04-2016 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 SUPERFAMILY SSF90123 20 340 4.32E-51 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 Pfam PF00664 ABC transporter transmembrane region 42 302 5.7E-13 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 Gene3D G3DSA:3.40.50.300 361 595 5.0E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 SMART SM00382 386 577 8.5E-21 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 PANTHER PTHR24221 2 610 0.0 T 25-04-2016 SMD_RS06845 491b1dd86daf5b0fbf1b54c22039284c 610 PANTHER PTHR24221:SF203 2 610 0.0 T 25-04-2016 SMD_RS07095 8b367091f8c2348352cb6da4338f22b8 462 PANTHER PTHR32468 41 457 2.9E-125 T 25-04-2016 SMD_RS07095 8b367091f8c2348352cb6da4338f22b8 462 PANTHER PTHR32468:SF0 41 457 2.9E-125 T 25-04-2016 SMD_RS07095 8b367091f8c2348352cb6da4338f22b8 462 Pfam PF00999 Sodium/hydrogen exchanger family 73 455 4.4E-55 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 PANTHER PTHR34183:SF1 6 290 2.4E-106 T 25-04-2016 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 PANTHER PTHR34183:SF1 342 422 2.4E-106 T 25-04-2016 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 Gene3D G3DSA:3.30.70.1070 348 414 6.3E-7 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 SUPERFAMILY SSF50685 128 214 6.98E-9 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 Pfam PF03330 Lytic transglycolase 129 218 7.5E-23 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 PANTHER PTHR34183 6 290 2.4E-106 T 25-04-2016 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 PANTHER PTHR34183 342 422 2.4E-106 T 25-04-2016 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 131 229 3.0E-42 T 25-04-2016 IPR012997 Rare lipoprotein A SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 SUPERFAMILY SSF110997 349 420 1.26E-7 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS18845 b2a33b28530d8f4893bc63dc7cb7702d 422 Pfam PF05036 Sporulation related domain 347 420 1.2E-9 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 PANTHER PTHR23105 16 229 7.0E-73 T 25-04-2016 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 9.6E-99 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.129 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 6.1E-45 T 25-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 25-04-2016 IPR023673 Ribosomal protein L1, conserved site SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 PIRSF PIRSF002155 1 227 5.0E-70 T 25-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 Gene3D G3DSA:3.40.50.790 68 159 1.5E-35 T 25-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 Gene3D G3DSA:3.30.190.20 161 226 9.7E-43 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 Gene3D G3DSA:3.30.190.20 18 67 9.7E-43 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 PANTHER PTHR23105:SF5 16 229 7.0E-73 T 25-04-2016 SMD_RS04120 1266ba9bba92ef10f4f6224a1012f279 232 SUPERFAMILY SSF56808 5 225 1.18E-73 T 25-04-2016 IPR023674 Ribosomal protein L1-like SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 Pfam PF00326 Prolyl oligopeptidase family 660 817 8.8E-23 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 PANTHER PTHR11731 131 819 2.8E-159 T 25-04-2016 SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 PANTHER PTHR11731:SF117 131 819 2.8E-159 T 25-04-2016 SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 SUPERFAMILY SSF53474 563 817 4.86E-45 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 Gene3D G3DSA:2.120.10.30 260 492 2.7E-15 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 Gene3D G3DSA:2.120.10.30 82 165 2.7E-15 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 SUPERFAMILY SSF82171 105 177 1.57E-13 T 25-04-2016 SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 SUPERFAMILY SSF82171 232 490 1.57E-13 T 25-04-2016 SMD_RS14135 1b665bf48ba9e39106de4e945ac59edb 820 Gene3D G3DSA:3.40.50.1820 563 818 6.6E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PANTHER PTHR11739:SF4 18 384 6.0E-151 T 25-04-2016 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 ProSitePatterns PS00480 Citrate synthase signature. 267 279 - T 25-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 SUPERFAMILY SSF48256 18 378 6.41E-122 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 Gene3D G3DSA:1.10.230.10 246 331 2.2E-28 T 25-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PRINTS PR00143 Citrate synthase signature 260 280 1.8E-34 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PRINTS PR00143 Citrate synthase signature 185 200 1.8E-34 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PRINTS PR00143 Citrate synthase signature 317 333 1.8E-34 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PRINTS PR00143 Citrate synthase signature 337 351 1.8E-34 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PRINTS PR00143 Citrate synthase signature 207 235 1.8E-34 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PIRSF PIRSF001369 11 385 1.2E-109 T 25-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 Gene3D G3DSA:1.10.580.10 23 245 4.9E-75 T 25-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 PANTHER PTHR11739 18 384 6.0E-151 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 366 1.7E-113 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMD_RS16490 f66b3f2bbf838dbbbe4f42eb05cf64f5 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 384 7.5E-153 T 25-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 Pfam PF02678 Pirin 22 127 5.0E-34 T 25-04-2016 IPR003829 Pirin, N-terminal domain SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 Pfam PF05726 Pirin C-terminal cupin domain 182 284 1.3E-30 T 25-04-2016 IPR008778 Pirin, C-terminal domain SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 PIRSF PIRSF006232 2 288 1.7E-92 T 25-04-2016 IPR012093 Pirin SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 PANTHER PTHR13903 1 286 2.3E-161 T 25-04-2016 IPR012093 Pirin SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 SUPERFAMILY SSF51182 1 286 2.85E-84 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 PANTHER PTHR13903:SF12 1 286 2.3E-161 T 25-04-2016 SMD_RS12525 1dd3b98ad7a61931f4d2facdd734edc6 288 Gene3D G3DSA:2.60.120.10 9 257 3.7E-81 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS07505 ef6ade54c29083ad24992432b96a5f4c 150 PANTHER PTHR37486:SF1 4 150 6.1E-73 T 25-04-2016 SMD_RS07505 ef6ade54c29083ad24992432b96a5f4c 150 PANTHER PTHR37486 4 150 6.1E-73 T 25-04-2016 SMD_RS07505 ef6ade54c29083ad24992432b96a5f4c 150 SUPERFAMILY SSF101738 6 117 7.98E-44 T 25-04-2016 IPR007481 Stringent starvation protein B SMD_RS07505 ef6ade54c29083ad24992432b96a5f4c 150 Gene3D G3DSA:2.30.30.220 7 109 2.3E-43 T 25-04-2016 IPR007481 Stringent starvation protein B SMD_RS07505 ef6ade54c29083ad24992432b96a5f4c 150 PIRSF PIRSF005276 5 150 8.6E-54 T 25-04-2016 IPR007481 Stringent starvation protein B SMD_RS07505 ef6ade54c29083ad24992432b96a5f4c 150 Pfam PF04386 Stringent starvation protein B 11 150 2.4E-32 T 25-04-2016 IPR007481 Stringent starvation protein B SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 Gene3D G3DSA:1.20.20.10 11 86 2.8E-30 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 SUPERFAMILY SSF81333 12 86 4.05E-17 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 25-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 Pfam PF00137 ATP synthase subunit C 18 81 1.9E-8 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 PRINTS PR00124 ATP synthase C subunit signature 19 38 2.6E-5 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 PRINTS PR00124 ATP synthase C subunit signature 57 82 2.6E-5 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 PRINTS PR00124 ATP synthase C subunit signature 40 55 2.6E-5 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 16 84 14.624 T 25-04-2016 SMD_RS19165 ea23358d15569d59d11b3cf2ac3c1de4 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 8.3E-23 T 25-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 Pfam PF00551 Formyl transferase 6 182 8.2E-51 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 Gene3D G3DSA:3.40.50.170 5 195 6.7E-61 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 PANTHER PTHR10520 6 195 6.4E-103 T 25-04-2016 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 PANTHER PTHR10520:SF40 6 195 6.4E-103 T 25-04-2016 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 189 27.535 T 25-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 190 1.4E-60 T 25-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SMD_RS05500 ea4f63026e3e0aea21698d3ec49b0ea5 219 SUPERFAMILY SSF53328 6 196 6.93E-56 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 PANTHER PTHR20854 1 250 7.8E-82 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 SUPERFAMILY SSF56655 7 260 5.5E-75 T 25-04-2016 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 Gene3D G3DSA:3.40.190.80 154 257 4.3E-42 T 25-04-2016 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 Gene3D G3DSA:3.30.540.10 6 153 4.9E-44 T 25-04-2016 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 25-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 PANTHER PTHR20854:SF5 1 250 7.8E-82 T 25-04-2016 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 7.4E-92 T 25-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 Pfam PF00459 Inositol monophosphatase family 8 244 6.4E-46 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 1.3E-11 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.3E-11 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.3E-11 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.3E-11 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS16735 cee3de00a79558d2cd1e880df0ff257e 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 25-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PANTHER PTHR10422:SF27 8 533 0.0 T 25-04-2016 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 248 302 - T 25-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PANTHER PTHR10422 8 533 0.0 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 94 118 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 316 337 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 398 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 137 149 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 67 90 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 351 369 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 267 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 292 307 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 429 450 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 20 45 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 195 214 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 184 2.8E-123 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 21 522 1.1E-208 T 25-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 29 470 1.5E-149 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 Gene3D G3DSA:1.20.210.10 9 525 9.7E-221 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS02030 e32e96dfaecb522df95f90056e79a7a1 535 SUPERFAMILY SSF81442 18 523 1.3E-190 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20440 25943a47078b197266a8528db9562ff1 563 Pfam PF03109 ABC1 family 114 231 1.9E-33 T 25-04-2016 IPR004147 UbiB domain SMD_RS20440 25943a47078b197266a8528db9562ff1 563 SUPERFAMILY SSF56112 194 360 2.44E-25 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS20440 25943a47078b197266a8528db9562ff1 563 SUPERFAMILY SSF56112 95 159 2.44E-25 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS20440 25943a47078b197266a8528db9562ff1 563 Gene3D G3DSA:3.90.1200.10 155 216 0.001 T 25-04-2016 SMD_RS20440 25943a47078b197266a8528db9562ff1 563 Gene3D G3DSA:3.90.1200.10 261 315 0.001 T 25-04-2016 SMD_RS20440 25943a47078b197266a8528db9562ff1 563 PANTHER PTHR10566:SF10 19 544 3.9E-136 T 25-04-2016 SMD_RS20440 25943a47078b197266a8528db9562ff1 563 PANTHER PTHR10566 19 544 3.9E-136 T 25-04-2016 SMD_RS20160 a2fdfca1a64aba29199221f16d22614a 301 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 128 158 2.9E-7 T 25-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 SMD_RS20160 a2fdfca1a64aba29199221f16d22614a 301 Gene3D G3DSA:3.90.79.10 122 298 4.7E-45 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS20160 a2fdfca1a64aba29199221f16d22614a 301 PANTHER PTHR22769 119 299 2.0E-62 T 25-04-2016 SMD_RS20160 a2fdfca1a64aba29199221f16d22614a 301 Pfam PF00293 NUDIX domain 164 274 3.2E-17 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS20160 a2fdfca1a64aba29199221f16d22614a 301 PANTHER PTHR22769:SF7 119 299 2.0E-62 T 25-04-2016 SMD_RS20160 a2fdfca1a64aba29199221f16d22614a 301 SUPERFAMILY SSF55811 112 270 2.44E-40 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 PIRSF PIRSF000171 1 586 1.3E-37 T 25-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 25-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Gene3D G3DSA:3.90.700.10 247 352 1.1E-41 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Gene3D G3DSA:4.10.80.40 543 596 1.4E-28 T 25-04-2016 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 2.5E-287 T 25-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 SUPERFAMILY SSF46977 454 596 1.83E-48 T 25-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 PANTHER PTHR11632 1 591 0.0 T 25-04-2016 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 SUPERFAMILY SSF56425 240 358 2.39E-42 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 SUPERFAMILY SSF51905 4 263 3.62E-74 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 SUPERFAMILY SSF51905 362 436 3.62E-74 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Gene3D G3DSA:1.20.58.100 436 542 3.1E-37 T 25-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Pfam PF00890 FAD binding domain 12 408 3.8E-122 T 25-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 8.6E-240 T 25-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 2.4E-43 T 25-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 PANTHER PTHR11632:SF51 1 591 0.0 T 25-04-2016 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Gene3D G3DSA:3.50.50.60 3 246 5.3E-124 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09160 1db36465ee3a80305e26212c0f0b8d60 596 Gene3D G3DSA:3.50.50.60 354 427 5.3E-124 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03375 ed46cbde94c09f4c75e65ce72435da5c 673 Pfam PF01757 Acyltransferase family 28 348 2.0E-32 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SMD_RS03375 ed46cbde94c09f4c75e65ce72435da5c 673 SUPERFAMILY SSF52266 432 664 6.23E-5 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS03375 ed46cbde94c09f4c75e65ce72435da5c 673 PANTHER PTHR23028 30 377 7.8E-77 T 25-04-2016 SMD_RS03375 ed46cbde94c09f4c75e65ce72435da5c 673 PANTHER PTHR23028:SF53 30 377 7.8E-77 T 25-04-2016 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PANTHER PTHR11811:SF28 1 300 6.1E-159 T 25-04-2016 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 SUPERFAMILY SSF48179 167 299 8.16E-41 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 Gene3D G3DSA:3.40.50.720 1 170 4.8E-48 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 1.2E-43 T 25-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 300 5.2E-114 T 25-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 3.6E-37 T 25-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 3.6E-37 T 25-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 112 137 3.6E-37 T 25-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 3.6E-37 T 25-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 158 186 3.6E-37 T 25-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 Gene3D G3DSA:1.10.1040.10 171 279 2.3E-34 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 SMART SM01350 169 297 2.8E-5 T 25-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 169 278 2.7E-22 T 25-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 25-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 PANTHER PTHR11811 1 300 6.1E-159 T 25-04-2016 SMD_RS18800 60e3e46528678228d58f04d36b953d77 301 SUPERFAMILY SSF51735 1 155 1.21E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 6.3E-40 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 6.3E-40 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.3E-40 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 6.3E-40 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.3E-40 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 SUPERFAMILY SSF52833 105 196 1.36E-22 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03850 356eac6a10483582794562bc270960b2 530 SUPERFAMILY SSF52833 1 101 3.91E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03850 356eac6a10483582794562bc270960b2 530 PANTHER PTHR22912:SF107 199 513 1.7E-209 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 Gene3D G3DSA:3.50.50.60 328 440 7.1E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 1.4E-241 T 25-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 SUPERFAMILY SSF51905 206 513 2.96E-51 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 Gene3D G3DSA:3.50.50.60 210 327 1.1E-23 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 501 1.7E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 3.7E-65 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 25-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 Gene3D G3DSA:3.40.30.10 105 197 1.5E-35 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03850 356eac6a10483582794562bc270960b2 530 Gene3D G3DSA:3.40.30.10 1 94 1.7E-29 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03850 356eac6a10483582794562bc270960b2 530 PANTHER PTHR22912 199 513 1.7E-209 T 25-04-2016 SMD_RS03850 356eac6a10483582794562bc270960b2 530 PIRSF PIRSF000238 1 520 4.6E-266 T 25-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 Gene3D G3DSA:3.50.50.60 441 516 4.6E-14 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03850 356eac6a10483582794562bc270960b2 530 Pfam PF13192 Thioredoxin domain 125 195 3.2E-9 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Gene3D G3DSA:3.40.50.300 560 650 1.4E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Gene3D G3DSA:3.40.50.300 287 388 1.4E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 727 0.0 T 25-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 PANTHER PTHR11070 6 518 1.2E-240 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 PANTHER PTHR11070 537 726 1.2E-240 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Gene3D G3DSA:1.10.486.10 389 549 3.8E-45 T 25-04-2016 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 SUPERFAMILY SSF52540 6 650 9.65E-176 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 2.3E-67 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Gene3D G3DSA:3.40.50.300 192 286 2.9E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Gene3D G3DSA:3.40.50.300 4 110 2.9E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Pfam PF13361 UvrD-like helicase C-terminal domain 278 624 1.2E-77 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 PANTHER PTHR11070:SF7 6 518 1.2E-240 T 25-04-2016 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 PANTHER PTHR11070:SF7 537 726 1.2E-240 T 25-04-2016 SMD_RS21425 4306a75c9edf4a47846bcfbcdae90225 730 Gene3D G3DSA:1.10.10.160 114 191 3.7E-21 T 25-04-2016 IPR013986 DExx box DNA helicase domain SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 PANTHER PTHR10110 1 548 2.2E-187 T 25-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 PRINTS PR01084 Na+/H+ exchanger signature 69 83 3.4E-6 T 25-04-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 PRINTS PR01084 Na+/H+ exchanger signature 55 66 3.4E-6 T 25-04-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 PRINTS PR01084 Na+/H+ exchanger signature 119 129 3.4E-6 T 25-04-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 PANTHER PTHR10110:SF120 1 548 2.2E-187 T 25-04-2016 SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 10 545 2.1E-122 T 25-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 SMD_RS02610 3b76d3db4dc939f2f4cb5afafb04af67 549 Pfam PF00999 Sodium/hydrogen exchanger family 10 420 2.1E-63 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Pfam PF02810 SEC-C motif 890 908 1.1E-10 T 25-04-2016 IPR004027 SEC-C motif SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Pfam PF07516 SecA Wing and Scaffold domain 615 826 5.0E-65 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 101 115 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 63 87 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 170 190 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 117 127 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 409 422 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 372 389 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PRINTS PR00906 SecA protein signature 335 357 3.8E-72 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Pfam PF07517 SecA DEAD-like domain 7 398 5.7E-134 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Gene3D G3DSA:3.40.50.300 2 228 1.5E-130 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Gene3D G3DSA:3.40.50.300 365 412 1.5E-130 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 20.031 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SUPERFAMILY SSF81767 227 364 1.83E-43 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 ProSitePatterns PS01312 SecA family signature. 496 511 - T 25-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Pfam PF01043 SecA preprotein cross-linking domain 233 354 4.5E-38 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Gene3D G3DSA:1.10.3060.10 645 828 3.4E-57 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SUPERFAMILY SSF52540 6 228 1.23E-86 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SUPERFAMILY SSF52540 364 411 1.23E-86 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Gene3D G3DSA:3.40.50.300 413 616 5.1E-90 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SUPERFAMILY SSF52540 412 615 1.7E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SMART SM00958 228 354 2.3E-76 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SUPERFAMILY SSF81886 886 898 1.7E-78 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SUPERFAMILY SSF81886 618 837 1.7E-78 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 Gene3D G3DSA:3.90.1440.10 230 364 2.3E-45 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PANTHER PTHR30612 1 516 0.0 T 25-04-2016 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 PANTHER PTHR30612 547 910 0.0 T 25-04-2016 SMD_RS03505 75320584d26b12f20308e67db1483af6 910 SMART SM00957 6 398 0.0 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SMD_RS03965 39c3441865f5c48a65ca95dbc72663b3 197 Pfam PF03358 NADPH-dependent FMN reductase 32 138 2.6E-8 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMD_RS03965 39c3441865f5c48a65ca95dbc72663b3 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 195 9.6E-46 T 25-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SMD_RS03965 39c3441865f5c48a65ca95dbc72663b3 197 SUPERFAMILY SSF52218 1 195 7.73E-56 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS03965 39c3441865f5c48a65ca95dbc72663b3 197 Gene3D G3DSA:3.40.50.360 2 196 4.4E-63 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS03965 39c3441865f5c48a65ca95dbc72663b3 197 PANTHER PTHR30546 1 197 1.5E-74 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 SMART SM00671 235 271 1.4 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 SMART SM00671 199 234 2.9E-7 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 SUPERFAMILY SSF81901 194 270 5.41E-16 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 SUPERFAMILY SSF81901 118 159 5.41E-16 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 PANTHER PTHR11102:SF11 36 165 2.8E-29 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 PANTHER PTHR11102:SF11 181 274 2.8E-29 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 PANTHER PTHR11102 36 165 2.8E-29 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 PANTHER PTHR11102 181 274 2.8E-29 T 25-04-2016 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 Gene3D G3DSA:1.25.40.10 191 269 1.4E-24 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 Gene3D G3DSA:1.25.40.10 52 156 1.4E-24 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 Pfam PF08238 Sel1 repeat 199 234 5.3E-7 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 Pfam PF08238 Sel1 repeat 237 268 0.022 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS07085 276fcfaae6af8515536454c87b0aa334 292 Pfam PF08238 Sel1 repeat 60 75 1.9 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS06350 b7d6bc7585ff509d1e43bb9cce7b1e86 211 Gene3D G3DSA:3.20.80.10 1 201 1.3E-65 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain SMD_RS06350 b7d6bc7585ff509d1e43bb9cce7b1e86 211 Pfam PF06445 GyrI-like small molecule binding domain 24 197 1.7E-22 T 25-04-2016 IPR029442 GyrI-like small molecule binding domain SMD_RS06350 b7d6bc7585ff509d1e43bb9cce7b1e86 211 SUPERFAMILY SSF55136 128 201 4.97E-9 T 25-04-2016 IPR011256 Regulatory factor, effector binding domain SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PANTHER PTHR30034:SF0 1 334 6.6E-151 T 25-04-2016 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 318 2.3E-104 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 SUPERFAMILY SSF101801 247 321 2.22E-13 T 25-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 Pfam PF02154 Flagellar motor switch protein FliM 36 228 3.2E-72 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 SUPERFAMILY SSF103039 5 13 1.18E-19 T 25-04-2016 IPR028976 CheC-like domain SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 SUPERFAMILY SSF103039 53 229 1.18E-19 T 25-04-2016 IPR028976 CheC-like domain SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PIRSF PIRSF002888 1 323 5.6E-93 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PANTHER PTHR30034 1 334 6.6E-151 T 25-04-2016 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 Gene3D G3DSA:2.30.330.10 240 318 1.7E-9 T 25-04-2016 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 316 3.6E-17 T 25-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 1.0E-23 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 210 228 1.0E-23 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 1.0E-23 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS10810 70b0fc1a65d4beb8dbaff8cab15904d4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.0E-23 T 25-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 SUPERFAMILY SSF47384 196 275 2.94E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 SMART SM00388 213 279 1.3E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 Gene3D G3DSA:3.30.565.10 279 422 8.6E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.4E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.4E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.4E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.4E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 Gene3D G3DSA:1.10.287.130 206 275 1.0E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 PANTHER PTHR24423 148 422 2.2E-58 T 25-04-2016 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 1.5E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 SMART SM00387 322 423 6.1E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 SUPERFAMILY SSF55874 278 422 2.75E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS03680 9e257f0264d97360b20e845b26e6ea94 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 421 3.6E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19340 f51801c295dd6a7c4b5414b9102b86ed 441 Pfam PF12704 MacB-like periplasmic core domain 22 276 4.3E-21 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS19340 f51801c295dd6a7c4b5414b9102b86ed 441 PANTHER PTHR30572:SF5 254 441 7.7E-105 T 25-04-2016 SMD_RS19340 f51801c295dd6a7c4b5414b9102b86ed 441 PANTHER PTHR30572:SF5 17 234 7.7E-105 T 25-04-2016 SMD_RS19340 f51801c295dd6a7c4b5414b9102b86ed 441 Pfam PF02687 FtsX-like permease family 318 434 6.7E-14 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS19340 f51801c295dd6a7c4b5414b9102b86ed 441 PANTHER PTHR30572 254 441 7.7E-105 T 25-04-2016 SMD_RS19340 f51801c295dd6a7c4b5414b9102b86ed 441 PANTHER PTHR30572 17 234 7.7E-105 T 25-04-2016 SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 7 129 7.9E-51 T 25-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 Pfam PF03061 Thioesterase superfamily 21 105 6.0E-21 T 25-04-2016 IPR006683 Thioesterase domain SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 12 29 - T 25-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 Gene3D G3DSA:3.10.129.10 5 139 5.4E-48 T 25-04-2016 IPR029069 HotDog domain SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 PIRSF PIRSF003230 1 140 1.8E-42 T 25-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 PANTHER PTHR31793:SF9 4 137 2.9E-48 T 25-04-2016 SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 PANTHER PTHR31793 4 137 2.9E-48 T 25-04-2016 SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 SUPERFAMILY SSF54637 4 136 5.54E-41 T 25-04-2016 IPR029069 HotDog domain SMD_RS17210 65839da45775ba9bde8d70c192ceeabd 143 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 116 2.7E-34 T 25-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 PANTHER PTHR18968:SF134 174 770 7.9E-215 T 25-04-2016 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 Gene3D G3DSA:3.40.50.970 502 634 1.0E-9 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 Gene3D G3DSA:3.40.50.970 440 496 8.4E-4 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 468 554 4.0E-5 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 PANTHER PTHR18968 174 770 7.9E-215 T 25-04-2016 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 SUPERFAMILY SSF52518 58 215 9.42E-13 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 SUPERFAMILY SSF52518 448 635 7.56E-13 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 Gene3D G3DSA:3.40.920.10 735 933 3.6E-19 T 25-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 SUPERFAMILY SSF53323 734 936 6.54E-28 T 25-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 742 929 1.2E-22 T 25-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMD_RS00585 4c062c87ba3d813526fd41019be0158b 1228 SUPERFAMILY SSF52922 280 409 5.61E-9 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 Pfam PF07690 Major Facilitator Superfamily 15 407 1.9E-48 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 Gene3D G3DSA:1.20.1250.20 265 459 1.7E-18 T 25-04-2016 SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 Gene3D G3DSA:1.20.1250.20 8 186 5.5E-26 T 25-04-2016 SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 SUPERFAMILY SSF103473 3 192 5.49E-59 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 SUPERFAMILY SSF103473 246 458 5.49E-59 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 PANTHER PTHR23501 8 472 4.2E-131 T 25-04-2016 SMD_RS03875 7d82dc064022aed4c89a994633f50a58 472 PANTHER PTHR23501:SF76 8 472 4.2E-131 T 25-04-2016 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 Gene3D G3DSA:3.20.20.140 245 525 1.8E-20 T 25-04-2016 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 Gene3D G3DSA:2.30.40.10 35 128 1.0E-18 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 SUPERFAMILY SSF51338 36 102 2.64E-23 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 SUPERFAMILY SSF51338 533 577 2.64E-23 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 Pfam PF07969 Amidohydrolase family 91 574 1.9E-121 T 25-04-2016 IPR013108 Amidohydrolase 3 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 PANTHER PTHR22642:SF2 36 592 7.0E-164 T 25-04-2016 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 PANTHER PTHR22642 36 592 7.0E-164 T 25-04-2016 SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 SUPERFAMILY SSF51556 101 163 3.4E-45 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS13215 af2e5a2269ab4f70cc9aa0549619611f 656 SUPERFAMILY SSF51556 243 534 3.4E-45 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 PANTHER PTHR26402 2 200 1.6E-101 T 25-04-2016 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 PANTHER PTHR26402:SF137 2 200 1.6E-101 T 25-04-2016 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 2.0E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 2.0E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 2.0E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 SMART SM00448 2 115 1.3E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 Pfam PF00072 Response regulator receiver domain 4 115 2.8E-24 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 SMART SM00421 137 194 1.1E-20 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 SUPERFAMILY SSF46894 125 200 2.48E-20 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 SUPERFAMILY SSF52172 1 128 1.08E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 Gene3D G3DSA:1.10.10.10 144 200 1.2E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 Gene3D G3DSA:3.40.50.2300 1 143 4.6E-37 T 25-04-2016 SMD_RS01695 749c8e02217eca14285ddece031f1a6b 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 194 4.9E-16 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 SUPERFAMILY SSF88659 98 160 3.71E-14 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 Pfam PF04542 Sigma-70 region 2 14 77 1.6E-8 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 131 147 9.0E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 159 9.0E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 PANTHER PTHR30173 1 160 3.1E-28 T 25-04-2016 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 Pfam PF08281 Sigma-70, region 4 107 159 4.2E-16 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 Gene3D G3DSA:1.10.1740.10 4 100 4.2E-11 T 25-04-2016 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 Gene3D G3DSA:1.10.10.10 102 160 3.7E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 SUPERFAMILY SSF88946 4 91 8.24E-12 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS18170 f3f254b16653bd1e02a9cc874b87108a 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 159 3.3E-21 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Pfam PF00364 Biotin-requiring enzyme 5 76 4.1E-20 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 475 582 5.0E-35 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Gene3D G3DSA:2.40.50.100 4 80 2.3E-21 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Gene3D G3DSA:3.30.390.30 463 590 3.3E-44 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PANTHER PTHR22912 115 587 1.0E-251 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 164 174 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Gene3D G3DSA:3.50.50.60 265 462 2.1E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PANTHER PTHR22912:SF160 115 587 1.0E-251 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 279 2.2E-39 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 150 2.2E-39 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 421 443 2.2E-39 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 392 408 2.2E-39 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 318 2.2E-39 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Gene3D G3DSA:3.50.50.60 128 264 7.3E-37 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 SUPERFAMILY SSF55424 473 595 1.46E-38 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 131 456 4.8E-65 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 129 585 2.0E-151 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 407 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 536 551 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 273 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 443 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 152 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 325 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 178 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 558 578 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 471 492 1.3E-69 T 25-04-2016 SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 SUPERFAMILY SSF51230 2 96 1.7E-23 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS19185 d94626e19a0eb72cda3680243ec1bf31 600 SUPERFAMILY SSF51905 130 509 1.37E-59 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.3E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PANTHER PTHR24322:SF211 155 190 2.5E-64 T 25-04-2016 SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PANTHER PTHR24322:SF211 10 139 2.5E-64 T 25-04-2016 SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.3E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.3E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.3E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.3E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.3E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.3E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 Gene3D G3DSA:3.40.50.720 7 244 1.2E-72 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 SUPERFAMILY SSF51735 7 244 1.14E-69 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PANTHER PTHR24322 155 190 2.5E-64 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 PANTHER PTHR24322 10 139 2.5E-64 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18760 a3fe805b597fc06721ceef6f117f319b 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 3.0E-51 T 25-04-2016 SMD_RS11605 dc96abc3d82620d745ba9e12b84ee4e7 302 SUPERFAMILY SSF47240 1 287 3.44E-79 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS11605 dc96abc3d82620d745ba9e12b84ee4e7 302 PANTHER PTHR30565:SF3 2 276 8.4E-121 T 25-04-2016 SMD_RS11605 dc96abc3d82620d745ba9e12b84ee4e7 302 Pfam PF05067 Manganese containing catalase 1 287 1.6E-83 T 25-04-2016 IPR007760 Manganese catalase SMD_RS11605 dc96abc3d82620d745ba9e12b84ee4e7 302 PANTHER PTHR30565 2 276 8.4E-121 T 25-04-2016 SMD_RS11605 dc96abc3d82620d745ba9e12b84ee4e7 302 Gene3D G3DSA:1.20.1260.10 1 197 1.6E-74 T 25-04-2016 IPR012347 Ferritin-related SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PANTHER PTHR32089:SF63 569 837 1.0E-106 T 25-04-2016 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SMART SM01358 66 299 0.0013 T 25-04-2016 IPR032255 Helical bimodular sensor domain SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SMART SM00283 587 834 5.9E-75 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PANTHER PTHR32089 569 837 1.0E-106 T 25-04-2016 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SUPERFAMILY SSF158472 328 379 1.83E-7 T 25-04-2016 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 Pfam PF00989 PAS fold 392 441 2.4E-5 T 25-04-2016 IPR013767 PAS fold GO:0006355 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SUPERFAMILY SSF55785 378 479 4.36E-11 T 25-04-2016 IPR000014 PAS domain SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 652 833 1.1E-46 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SMART SM00304 328 381 9.6E-6 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SMART SM00304 534 579 7.2 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 Gene3D G3DSA:3.30.450.20 379 441 5.3E-10 T 25-04-2016 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SUPERFAMILY SSF58104 554 835 1.24E-61 T 25-04-2016 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 SMART SM00091 391 458 2.8E-5 T 25-04-2016 IPR000014 PAS domain SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 Gene3D G3DSA:1.10.287.950 605 806 1.2E-52 T 25-04-2016 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 714 743 1.8E-50 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 390 1.8E-50 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 608 637 1.8E-50 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 762 791 1.8E-50 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 685 712 1.8E-50 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS19850 6a791b492f8a76b21f32b83d928e5700 845 Pfam PF00672 HAMP domain 308 378 1.7E-8 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS13070 ab7faba0d23494080c40cf6d35094380 117 Pfam PF00893 Small Multidrug Resistance protein 13 103 1.3E-20 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMD_RS13070 ab7faba0d23494080c40cf6d35094380 117 SUPERFAMILY SSF103481 17 115 7.06E-15 T 25-04-2016 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 Gene3D G3DSA:3.40.50.2300 1 123 2.4E-37 T 25-04-2016 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 PANTHER PTHR26402 1 222 4.3E-104 T 25-04-2016 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 SMART SM00448 1 112 1.2E-41 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.8E-106 T 25-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 3.4E-25 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 SMART SM00862 146 221 2.0E-25 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 Pfam PF00072 Response regulator receiver domain 4 113 1.7E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 PANTHER PTHR26402:SF575 1 222 4.3E-104 T 25-04-2016 SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 SUPERFAMILY SSF52172 1 176 8.9E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12405 b991e2958b4051c14febd0343cdc0450 232 Gene3D G3DSA:1.10.10.10 124 224 2.2E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 20 417 1.6E-171 T 25-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 Pfam PF00266 Aminotransferase class-V 38 406 1.5E-143 T 25-04-2016 IPR000192 Aminotransferase class V domain SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 Gene3D G3DSA:3.90.1150.10 297 412 1.8E-28 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 PANTHER PTHR11601 19 417 8.8E-179 T 25-04-2016 SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 SUPERFAMILY SSF53383 17 415 2.48E-123 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 229 248 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 Gene3D G3DSA:3.40.640.10 50 296 1.3E-84 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS05650 b2fb41a345cc3d83d3c88de6f1ecd19e 418 PANTHER PTHR11601:SF17 19 417 8.8E-179 T 25-04-2016 SMD_RS07220 b805eb1f7503478dd2c9e23c5a56cb6e 291 SUPERFAMILY SSF51658 30 261 3.91E-11 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS07220 b805eb1f7503478dd2c9e23c5a56cb6e 291 Hamap MF_00697 UPF0276 protein . 22 290 44.613 T 25-04-2016 IPR007801 Uncharacterised protein family UPF0276 SMD_RS07220 b805eb1f7503478dd2c9e23c5a56cb6e 291 Gene3D G3DSA:3.20.20.150 21 285 5.6E-99 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS07220 b805eb1f7503478dd2c9e23c5a56cb6e 291 Pfam PF05114 Protein of unknown function (DUF692) 22 282 2.0E-100 T 25-04-2016 IPR007801 Uncharacterised protein family UPF0276 SMD_RS07220 b805eb1f7503478dd2c9e23c5a56cb6e 291 PANTHER PTHR42194 16 291 7.5E-118 T 25-04-2016 SMD_RS07220 b805eb1f7503478dd2c9e23c5a56cb6e 291 PANTHER PTHR42194:SF1 16 291 7.5E-118 T 25-04-2016 SMD_RS03630 8ab857187b4c13d02f9a6a8d31576207 432 PANTHER PTHR10590 11 428 5.0E-195 T 25-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SMD_RS03630 8ab857187b4c13d02f9a6a8d31576207 432 Pfam PF07670 Nucleoside recognition 98 197 1.2E-6 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMD_RS03630 8ab857187b4c13d02f9a6a8d31576207 432 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 13 86 1.7E-23 T 25-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SMD_RS03630 8ab857187b4c13d02f9a6a8d31576207 432 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 209 428 3.3E-76 T 25-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PANTHER PTHR24078:SF190 4 75 2.5E-60 T 25-04-2016 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PANTHER PTHR24078:SF190 97 290 2.5E-60 T 25-04-2016 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PANTHER PTHR24078 4 75 2.5E-60 T 25-04-2016 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PANTHER PTHR24078 97 290 2.5E-60 T 25-04-2016 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 Pfam PF00226 DnaJ domain 5 66 2.8E-22 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 SMART SM00271 4 61 1.5E-24 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 Pfam PF01556 DnaJ C terminal domain 139 273 1.5E-28 T 25-04-2016 IPR002939 Chaperone DnaJ, C-terminal SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 SUPERFAMILY SSF46565 1 104 4.84E-30 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 Gene3D G3DSA:2.60.260.20 199 273 8.6E-16 T 25-04-2016 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 SUPERFAMILY SSF49493 202 284 9.42E-17 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 Gene3D G3DSA:2.60.260.20 122 187 2.0E-12 T 25-04-2016 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 SUPERFAMILY SSF49493 135 209 7.06E-12 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PRINTS PR00625 DnaJ domain signature 25 40 2.0E-21 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PRINTS PR00625 DnaJ domain signature 7 25 2.0E-21 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PRINTS PR00625 DnaJ domain signature 61 80 2.0E-21 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 PRINTS PR00625 DnaJ domain signature 41 61 2.0E-21 T 25-04-2016 IPR001623 DnaJ domain SMD_RS16440 cac5cf5a5a13f598e84e1bef7337ebc5 295 Gene3D G3DSA:1.10.287.110 2 99 2.3E-29 T 25-04-2016 IPR001623 DnaJ domain SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 SUPERFAMILY SSF53383 8 397 3.55E-118 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 5 398 53.379 T 25-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 Pfam PF00155 Aminotransferase class I and II 46 390 7.0E-68 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 PANTHER PTHR13693:SF60 1 400 2.7E-256 T 25-04-2016 SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 Gene3D G3DSA:3.40.640.10 61 281 2.4E-91 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 9 400 3.8E-222 T 25-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 Gene3D G3DSA:3.90.1150.10 282 394 1.6E-32 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS04410 f9ee7ad385fba4e430e0eaced349320c 402 PANTHER PTHR13693 1 400 2.7E-256 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 PANTHER PTHR30478 2 366 3.4E-140 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 Gene3D G3DSA:3.10.150.10 122 248 8.3E-37 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 5.2E-37 T 25-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 PIRSF PIRSF000804 1 366 2.0E-121 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.9E-107 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 SUPERFAMILY SSF55979 128 244 5.8E-29 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.5E-37 T 25-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 SUPERFAMILY SSF55979 246 366 4.83E-34 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 SMART SM00480 17 362 3.6E-137 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 SUPERFAMILY SSF55979 1 116 2.3E-27 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 7.9E-34 T 25-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 Gene3D G3DSA:3.10.150.10 1 121 6.8E-33 T 25-04-2016 SMD_RS00120 92faff597fd3613b88f434388593a1fc 366 Gene3D G3DSA:3.10.150.10 249 366 8.5E-36 T 25-04-2016 SMD_RS13625 f70832823df497c5386d122ca00038d1 355 SUPERFAMILY SSF53474 48 351 7.61E-34 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13625 f70832823df497c5386d122ca00038d1 355 Gene3D G3DSA:3.40.50.1820 54 353 2.9E-39 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13625 f70832823df497c5386d122ca00038d1 355 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 7 353 2.2E-157 T 25-04-2016 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 SMD_RS13625 f70832823df497c5386d122ca00038d1 355 PANTHER PTHR36837:SF1 1 353 5.2E-197 T 25-04-2016 SMD_RS13625 f70832823df497c5386d122ca00038d1 355 PANTHER PTHR36837 1 353 5.2E-197 T 25-04-2016 SMD_RS13625 f70832823df497c5386d122ca00038d1 355 Pfam PF00561 alpha/beta hydrolase fold 68 330 4.3E-17 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS10485 caebe809f81ac0c5e206a1d6fbe9640d 84 SUPERFAMILY SSF50037 3 76 1.1E-13 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal SMD_RS10485 caebe809f81ac0c5e206a1d6fbe9640d 84 Pfam PF04023 FeoA domain 1 76 3.5E-18 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMD_RS10485 caebe809f81ac0c5e206a1d6fbe9640d 84 PANTHER PTHR33238 1 81 9.2E-18 T 25-04-2016 SMD_RS10485 caebe809f81ac0c5e206a1d6fbe9640d 84 SMART SM00899 1 77 4.5E-18 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Pfam PF00330 Aconitase family (aconitate hydratase) 474 817 1.2E-39 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 SUPERFAMILY SSF74778 1 160 7.32E-66 T 25-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Gene3D G3DSA:3.40.1060.10 523 685 1.3E-85 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 PANTHER PTHR11670 305 861 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Gene3D G3DSA:3.20.19.10 162 361 3.7E-86 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Gene3D G3DSA:3.30.499.10 686 861 1.5E-52 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 9.5E-93 T 25-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Gene3D G3DSA:3.30.499.10 405 522 1.4E-63 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 PANTHER PTHR11670:SF39 305 861 0.0 T 25-04-2016 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 PIRSF PIRSF036687 1 861 0.0 T 25-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.6E-63 T 25-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 SUPERFAMILY SSF52016 162 372 3.14E-64 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 SUPERFAMILY SSF53732 380 856 3.92E-144 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10650 b45291e9c8240d4658fe7575c108961a 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 856 0.0 T 25-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 165 252 1.9E-22 T 25-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 252 39.279 T 25-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 SMART SM00849 12 164 3.3E-32 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 PANTHER PTHR11935:SF7 1 253 6.6E-84 T 25-04-2016 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 SUPERFAMILY SSF56281 1 253 3.54E-61 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 PIRSF PIRSF005457 1 252 3.1E-86 T 25-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.1E-91 T 25-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 Gene3D G3DSA:3.60.15.10 5 252 2.3E-74 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 PANTHER PTHR11935 1 253 6.6E-84 T 25-04-2016 SMD_RS04940 e3783c30293d08bc147334a4a53b893a 254 Pfam PF00753 Metallo-beta-lactamase superfamily 15 164 1.0E-15 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS19180 d7357ba32da6921cd672bffc814976a0 272 Gene3D G3DSA:2.40.160.20 107 229 3.7E-6 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS19180 d7357ba32da6921cd672bffc814976a0 272 SUPERFAMILY SSF56935 120 271 9.89E-6 T 25-04-2016 SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 PIRSF PIRSF009283 1 356 5.7E-124 T 25-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 356 2.1E-117 T 25-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 147 3.7E-62 T 25-04-2016 SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 PANTHER PTHR11959:SF1 7 356 4.0E-127 T 25-04-2016 SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 Gene3D G3DSA:3.10.180.10 160 356 4.4E-68 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 PANTHER PTHR11959 7 356 4.0E-127 T 25-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 SUPERFAMILY SSF54593 1 343 8.98E-67 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 Gene3D G3DSA:3.10.180.10 5 155 1.1E-35 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS20365 e7583bfcc13420752e0eeb586c0c06cb 356 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 274 1.5E-14 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 SMART SM00859 7 128 9.6E-35 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 SUPERFAMILY SSF51735 6 151 3.21E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 122 1.4E-29 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 PANTHER PTHR32338 1 311 8.8E-103 T 25-04-2016 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 Gene3D G3DSA:3.30.360.10 143 290 5.8E-34 T 25-04-2016 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 SUPERFAMILY SSF55347 136 290 1.55E-33 T 25-04-2016 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 316 7.4E-97 T 25-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 Gene3D G3DSA:3.40.50.720 5 142 5.6E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 25-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14935 07871b8ebd8604d6827eebeee6c8af34 317 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 30.609 T 25-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 PIRSF PIRSF000178 1 125 4.5E-38 T 25-04-2016 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 PANTHER PTHR10978:SF6 4 129 3.2E-55 T 25-04-2016 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 119 3.2E-26 T 25-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 SUPERFAMILY SSF81343 3 124 1.63E-32 T 25-04-2016 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 Gene3D G3DSA:1.20.1300.10 2 125 3.2E-40 T 25-04-2016 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 2.8E-36 T 25-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 PANTHER PTHR10978 4 129 3.2E-55 T 25-04-2016 SMD_RS09150 559af2fc1a8be3b1541f55a835fd383a 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 25-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.423 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 SUPERFAMILY SSF64263 1 119 1.06E-48 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 PANTHER PTHR14413 1 119 7.5E-61 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 Gene3D G3DSA:3.90.1030.10 1 117 5.3E-47 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.4E-45 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 Pfam PF01196 Ribosomal protein L17 20 116 4.7E-31 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04295 57b8f3f87e9583dcd38b33c6eadf3d4f 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14520 79ffc286422d184793074c3e34adb818 218 PANTHER PTHR11260:SF157 8 201 5.9E-40 T 25-04-2016 SMD_RS14520 79ffc286422d184793074c3e34adb818 218 PANTHER PTHR11260 8 201 5.9E-40 T 25-04-2016 SMD_RS14520 79ffc286422d184793074c3e34adb818 218 Pfam PF00043 Glutathione S-transferase, C-terminal domain 126 199 2.8E-11 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS14520 79ffc286422d184793074c3e34adb818 218 Gene3D G3DSA:3.40.30.10 8 89 5.4E-25 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14520 79ffc286422d184793074c3e34adb818 218 SUPERFAMILY SSF47616 83 201 1.81E-26 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS14520 79ffc286422d184793074c3e34adb818 218 SUPERFAMILY SSF52833 6 85 2.64E-22 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14520 79ffc286422d184793074c3e34adb818 218 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 82 1.0E-14 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS14520 79ffc286422d184793074c3e34adb818 218 Gene3D G3DSA:1.20.1050.10 90 207 2.0E-27 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS17560 59ffd6b1863a54cb92877f2a63d3f0de 111 Pfam PF00355 Rieske [2Fe-2S] domain 28 93 1.9E-11 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS17560 59ffd6b1863a54cb92877f2a63d3f0de 111 SUPERFAMILY SSF50022 23 110 8.64E-23 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS17560 59ffd6b1863a54cb92877f2a63d3f0de 111 PANTHER PTHR40261 3 110 3.3E-36 T 25-04-2016 SMD_RS17560 59ffd6b1863a54cb92877f2a63d3f0de 111 Gene3D G3DSA:2.102.10.10 6 110 1.2E-22 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS17560 59ffd6b1863a54cb92877f2a63d3f0de 111 PANTHER PTHR40261:SF2 3 110 3.3E-36 T 25-04-2016 SMD_RS02470 bdb1ac06ae9a867ded1554e5ae1e18fd 457 PANTHER PTHR11785:SF336 9 455 3.0E-199 T 25-04-2016 SMD_RS02470 bdb1ac06ae9a867ded1554e5ae1e18fd 457 PANTHER PTHR11785 9 455 3.0E-199 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS02470 bdb1ac06ae9a867ded1554e5ae1e18fd 457 PIRSF PIRSF006060 1 456 1.8E-64 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS02470 bdb1ac06ae9a867ded1554e5ae1e18fd 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 25-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SMD_RS02470 bdb1ac06ae9a867ded1554e5ae1e18fd 457 Pfam PF00324 Amino acid permease 19 455 8.1E-110 T 25-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SMD_RS05125 641d719ec393afd463590549186863cf 317 Gene3D G3DSA:3.40.50.300 40 195 5.2E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05125 641d719ec393afd463590549186863cf 317 SMART SM00382 46 187 0.0017 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS05125 641d719ec393afd463590549186863cf 317 PANTHER PTHR11603:SF155 1 299 9.0E-139 T 25-04-2016 SMD_RS05125 641d719ec393afd463590549186863cf 317 PIRSF PIRSF002849 2 317 5.3E-121 T 25-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SMD_RS05125 641d719ec393afd463590549186863cf 317 PANTHER PTHR11603 1 299 9.0E-139 T 25-04-2016 SMD_RS05125 641d719ec393afd463590549186863cf 317 SUPERFAMILY SSF52540 16 292 2.05E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05125 641d719ec393afd463590549186863cf 317 Gene3D G3DSA:1.10.8.300 212 313 3.7E-26 T 25-04-2016 SMD_RS05125 641d719ec393afd463590549186863cf 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 1.7E-63 T 25-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SMD_RS18035 17fa440cae2583859fb716343ee30100 200 SUPERFAMILY SSF56784 5 190 1.37E-31 T 25-04-2016 IPR023214 HAD-like domain SMD_RS18035 17fa440cae2583859fb716343ee30100 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 90 181 3.8E-9 T 25-04-2016 IPR023214 HAD-like domain SMD_RS18035 17fa440cae2583859fb716343ee30100 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 181 5.5E-14 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS18035 17fa440cae2583859fb716343ee30100 200 PANTHER PTHR12725 1 181 1.4E-19 T 25-04-2016 SMD_RS18035 17fa440cae2583859fb716343ee30100 200 Gene3D G3DSA:3.40.50.1000 1 185 2.4E-32 T 25-04-2016 IPR023214 HAD-like domain SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 Pfam PF00348 Polyprenyl synthetase 42 275 2.2E-74 T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 Gene3D G3DSA:1.10.600.10 15 331 4.0E-101 T 25-04-2016 IPR008949 Isoprenoid synthase domain SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 PANTHER PTHR12001:SF47 18 332 9.0E-109 T 25-04-2016 SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 SUPERFAMILY SSF48576 15 331 1.92E-97 T 25-04-2016 IPR008949 Isoprenoid synthase domain SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 PANTHER PTHR12001 18 332 9.0E-109 T 25-04-2016 IPR017446 Polyprenyl synthetase-related SMD_RS05755 cce5cd37578a37fc57d3eb5a815862a9 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMD_RS13210 12d22a0469bb8a3b5d7145efc397c3b1 427 Pfam PF13372 Alginate export 33 419 6.4E-102 T 25-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 SMD_RS17865 c81bc088ed8b87614ab537ceb45c0713 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 126 4.5E-51 T 25-04-2016 IPR006056 RidA family SMD_RS17865 c81bc088ed8b87614ab537ceb45c0713 128 Gene3D G3DSA:3.30.1330.40 4 127 1.9E-49 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS17865 c81bc088ed8b87614ab537ceb45c0713 128 PANTHER PTHR11803 1 127 6.9E-52 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS17865 c81bc088ed8b87614ab537ceb45c0713 128 SUPERFAMILY SSF55298 1 127 1.26E-44 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS17865 c81bc088ed8b87614ab537ceb45c0713 128 Pfam PF01042 Endoribonuclease L-PSP 9 126 4.2E-41 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Pfam PF00158 Sigma-54 interaction domain 149 315 1.4E-66 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 SMART SM00448 9 124 3.7E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 PANTHER PTHR32071 8 473 4.7E-196 T 25-04-2016 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 PANTHER PTHR32071:SF15 8 473 4.7E-196 T 25-04-2016 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Pfam PF00072 Response regulator receiver domain 11 118 1.8E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Gene3D G3DSA:1.10.8.60 322 397 1.3E-24 T 25-04-2016 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 25-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Gene3D G3DSA:3.40.50.300 147 321 2.8E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 459 479 6.0E-5 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 459 6.0E-5 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Gene3D G3DSA:3.40.50.2300 7 126 5.1E-32 T 25-04-2016 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Gene3D G3DSA:1.10.10.60 410 473 1.8E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 11 474 1.1E-204 T 25-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 25-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 SUPERFAMILY SSF46689 405 473 8.96E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 Pfam PF02954 Bacterial regulatory protein, Fis family 436 473 5.3E-10 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 25-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 SUPERFAMILY SSF52540 149 393 2.84E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 SUPERFAMILY SSF52172 10 193 1.71E-36 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS00725 305fa8ad81d898122ca46c56a78655af 482 SMART SM00382 169 312 7.4E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS00435 12482656f7637ca11d9c2596c785e56f 259 PANTHER PTHR30399:SF3 21 254 6.4E-82 T 25-04-2016 SMD_RS00435 12482656f7637ca11d9c2596c785e56f 259 PANTHER PTHR30399 21 254 6.4E-82 T 25-04-2016 SMD_RS00435 12482656f7637ca11d9c2596c785e56f 259 Pfam PF01863 Protein of unknown function DUF45 42 243 4.9E-47 T 25-04-2016 IPR002725 Protein of unknown function DUF45 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 PIRSF PIRSF001455 18 368 1.4E-100 T 25-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 5 369 39.455 T 25-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 SUPERFAMILY SSF56796 13 367 3.93E-104 T 25-04-2016 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 Gene3D G3DSA:1.20.1090.10 179 367 1.7E-63 T 25-04-2016 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 Pfam PF01761 3-dehydroquinate synthase 74 336 4.0E-101 T 25-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 365 1.2E-105 T 25-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 PANTHER PTHR21090 1 367 4.1E-164 T 25-04-2016 SMD_RS16530 e6268ed4133a2bfbbbe7084c83e58844 370 Gene3D G3DSA:3.40.50.1970 13 178 1.7E-57 T 25-04-2016 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 SUPERFAMILY SSF51161 87 340 6.79E-69 T 25-04-2016 IPR011004 Trimeric LpxA-like SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 PANTHER PTHR19136 97 358 3.8E-123 T 25-04-2016 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 293 1.4E-10 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 84 356 53.899 T 25-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 Gene3D G3DSA:2.160.10.10 173 338 5.5E-56 T 25-04-2016 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 PANTHER PTHR19136:SF52 97 358 3.8E-123 T 25-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 90 356 2.2E-125 T 25-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 215 250 6.9E-5 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 Gene3D G3DSA:1.10.166.10 85 154 5.9E-27 T 25-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMD_RS07065 c7c3a00101d29e74bd729047e6204414 359 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 87 153 2.9E-21 T 25-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 SUPERFAMILY SSF103473 10 426 5.36E-28 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 SUPERFAMILY SSF69593 417 599 9.15E-31 T 25-04-2016 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 Gene3D G3DSA:3.40.1130.10 447 610 2.1E-19 T 25-04-2016 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 Pfam PF07690 Major Facilitator Superfamily 38 381 3.4E-19 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 Pfam PF01553 Acyltransferase 449 571 2.2E-25 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 PANTHER PTHR10434:SF15 346 625 1.2E-145 T 25-04-2016 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 PANTHER PTHR10434 346 625 1.2E-145 T 25-04-2016 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 SMART SM00563 458 574 5.8E-31 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 Gene3D G3DSA:1.20.1250.20 11 188 5.4E-12 T 25-04-2016 SMD_RS20135 8575006eb6c266206d3fc30b3b941cd4 629 Gene3D G3DSA:1.20.1250.20 227 425 3.2E-8 T 25-04-2016 SMD_RS20060 5eab5e55ca8d32223a632d9471a77cec 248 Gene3D G3DSA:3.10.260.10 12 130 5.4E-13 T 25-04-2016 IPR003163 Transcription regulator HTH, APSES-type DNA-binding domain GO:0003677 SMD_RS20060 5eab5e55ca8d32223a632d9471a77cec 248 Pfam PF04383 KilA-N domain 10 110 2.9E-21 T 25-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding SMD_RS20060 5eab5e55ca8d32223a632d9471a77cec 248 SMART SM01252 13 111 3.1E-17 T 25-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding SMD_RS20060 5eab5e55ca8d32223a632d9471a77cec 248 SUPERFAMILY SSF54616 3 116 5.49E-17 T 25-04-2016 IPR003163 Transcription regulator HTH, APSES-type DNA-binding domain GO:0003677 SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 SUPERFAMILY SSF54913 1 103 1.37E-18 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 Gene3D G3DSA:3.30.70.120 1 102 5.7E-22 T 25-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 Pfam PF00543 Nitrogen regulatory protein P-II 4 102 1.8E-11 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 SMART SM00938 4 104 4.1E-7 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 PRINTS PR00340 P-II protein signature 23 41 2.8E-8 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 PRINTS PR00340 P-II protein signature 2 17 2.8E-8 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 PRINTS PR00340 P-II protein signature 83 103 2.8E-8 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS11215 db45ae909f54718c9ddae4ecba33db5c 106 PRINTS PR00340 P-II protein signature 52 75 2.8E-8 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 527 3.0E-39 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 Gene3D G3DSA:3.20.20.450 550 788 8.8E-70 T 25-04-2016 IPR001633 EAL domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SUPERFAMILY SSF141868 548 788 1.44E-67 T 25-04-2016 IPR001633 EAL domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SMART SM00091 245 311 9.9E-4 T 25-04-2016 IPR000014 PAS domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SUPERFAMILY SSF55785 235 354 4.36E-16 T 25-04-2016 IPR000014 PAS domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 Pfam PF13426 PAS domain 256 355 4.1E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SMART SM00086 315 356 2.2E-5 T 25-04-2016 IPR001610 PAC motif SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 Gene3D G3DSA:3.30.450.20 238 354 3.6E-16 T 25-04-2016 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 Gene3D G3DSA:3.30.70.270 369 531 1.7E-51 T 25-04-2016 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 242 362 1.9E-13 T 25-04-2016 IPR000014 PAS domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SMART SM00052 540 786 8.4E-60 T 25-04-2016 IPR001633 EAL domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 PANTHER PTHR33121:SF10 3 10 6.0E-43 T 25-04-2016 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 PANTHER PTHR33121:SF10 489 788 6.0E-43 T 25-04-2016 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SUPERFAMILY SSF55073 372 530 2.43E-46 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 PANTHER PTHR33121 3 10 6.0E-43 T 25-04-2016 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 PANTHER PTHR33121 489 788 6.0E-43 T 25-04-2016 SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 367 524 5.4E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 Pfam PF00563 EAL domain 550 781 4.7E-57 T 25-04-2016 IPR001633 EAL domain SMD_RS06795 977c8e454cbb690279f89743fc3b7f2a 807 SMART SM00267 356 528 7.8E-55 T 25-04-2016 IPR000160 GGDEF domain SMD_RS11760 6595297269b7742bee75745065c01441 469 Pfam PF00083 Sugar (and other) transporter 18 468 6.1E-107 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS11760 6595297269b7742bee75745065c01441 469 PANTHER PTHR23500:SF22 2 468 1.1E-217 T 25-04-2016 SMD_RS11760 6595297269b7742bee75745065c01441 469 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 467 3.3E-108 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS11760 6595297269b7742bee75745065c01441 469 PANTHER PTHR23500 2 468 1.1E-217 T 25-04-2016 SMD_RS11760 6595297269b7742bee75745065c01441 469 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS11760 6595297269b7742bee75745065c01441 469 ProSitePatterns PS00216 Sugar transport proteins signature 1. 320 337 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS11760 6595297269b7742bee75745065c01441 469 Gene3D G3DSA:1.20.1250.20 263 466 1.8E-21 T 25-04-2016 SMD_RS11760 6595297269b7742bee75745065c01441 469 Gene3D G3DSA:1.20.1250.20 20 212 1.4E-23 T 25-04-2016 SMD_RS11760 6595297269b7742bee75745065c01441 469 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS11760 6595297269b7742bee75745065c01441 469 PRINTS PR00171 Sugar transporter signature 108 127 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS11760 6595297269b7742bee75745065c01441 469 PRINTS PR00171 Sugar transporter signature 395 407 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS11760 6595297269b7742bee75745065c01441 469 PRINTS PR00171 Sugar transporter signature 25 35 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS11760 6595297269b7742bee75745065c01441 469 PRINTS PR00171 Sugar transporter signature 372 393 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS11760 6595297269b7742bee75745065c01441 469 PRINTS PR00171 Sugar transporter signature 276 286 1.2E-24 T 25-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SMD_RS11760 6595297269b7742bee75745065c01441 469 SUPERFAMILY SSF103473 11 468 2.88E-67 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 SMART SM00382 26 223 3.5E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 SMART SM00382 338 503 5.7E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 PANTHER PTHR19211:SF49 1 556 0.0 T 25-04-2016 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 SUPERFAMILY SSF52540 119 238 8.46E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 SUPERFAMILY SSF52540 2 84 8.46E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 Pfam PF12848 ABC transporter 217 296 1.9E-23 T 25-04-2016 IPR032781 ABC-transporter extension domain SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 Gene3D G3DSA:3.40.50.300 1 266 2.0E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 Gene3D G3DSA:3.40.50.300 312 530 4.6E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 Pfam PF00005 ABC transporter 329 460 1.8E-22 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 Pfam PF00005 ABC transporter 17 178 7.9E-22 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 PANTHER PTHR19211 1 556 0.0 T 25-04-2016 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 Pfam PF16326 ABC transporter C-terminal domain 560 618 5.8E-9 T 25-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SMD_RS17285 07c803d7dde68cc9e727fcfbb064ff91 621 SUPERFAMILY SSF52540 301 515 2.13E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 PANTHER PTHR10992:SF773 17 293 1.6E-56 T 25-04-2016 SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 PRINTS PR00412 Epoxide hydrolase signature 106 119 3.6E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 PRINTS PR00412 Epoxide hydrolase signature 268 290 3.6E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 PRINTS PR00412 Epoxide hydrolase signature 39 57 3.6E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 PRINTS PR00412 Epoxide hydrolase signature 120 133 3.6E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 Gene3D G3DSA:3.40.50.1820 8 293 3.0E-69 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 SUPERFAMILY SSF53474 5 293 1.3E-62 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 PANTHER PTHR10992 17 293 1.6E-56 T 25-04-2016 SMD_RS01075 0e5bd4e870b39ea890b0914093903db3 296 Pfam PF00561 alpha/beta hydrolase fold 34 146 1.4E-20 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 PANTHER PTHR10953 102 375 1.4E-95 T 25-04-2016 SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 Pfam PF00899 ThiF family 119 357 9.2E-67 T 25-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 SMART SM00450 6 102 4.9E-15 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 PANTHER PTHR10953:SF153 102 375 1.4E-95 T 25-04-2016 SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 Gene3D G3DSA:3.40.250.10 3 105 4.1E-26 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 Pfam PF00581 Rhodanese-like domain 7 98 5.5E-10 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 Gene3D G3DSA:3.40.50.720 116 360 1.0E-73 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 SUPERFAMILY SSF52821 2 105 6.81E-27 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS09795 6c6e34b17fde5dc6a77d9576fd2982d8 378 SUPERFAMILY SSF69572 116 362 2.35E-90 T 25-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 SUPERFAMILY SSF53383 29 463 3.22E-91 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 Gene3D G3DSA:3.90.1150.10 334 463 3.1E-26 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 PANTHER PTHR11986 15 465 6.6E-102 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 Pfam PF00202 Aminotransferase class-III 39 461 7.8E-75 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 Gene3D G3DSA:3.40.640.10 73 333 7.2E-71 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS06575 c2784259ffc1aebc8e1e38190661d38a 466 PANTHER PTHR11986:SF17 15 465 6.6E-102 T 25-04-2016 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 Pfam PF00437 Type II/IV secretion system protein 198 462 2.5E-83 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 SUPERFAMILY SSF160246 14 155 4.18E-24 T 25-04-2016 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 158 3.1E-14 T 25-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 390 404 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 SUPERFAMILY SSF52540 180 570 3.7E-94 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 Gene3D G3DSA:3.40.50.300 300 571 1.2E-93 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 92 570 1.1E-205 T 25-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 PANTHER PTHR30258:SF2 3 573 8.2E-219 T 25-04-2016 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 PANTHER PTHR30258 3 573 8.2E-219 T 25-04-2016 SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 SMART SM00382 323 444 8.2E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS03150 8af859e556e3048da3067188f587e9d8 573 Gene3D G3DSA:3.30.450.90 170 295 4.5E-51 T 25-04-2016 SMD_RS05750 3d47e11c4b7351c35267b2cec0513430 263 PANTHER PTHR22946:SF4 1 263 1.8E-116 T 25-04-2016 SMD_RS05750 3d47e11c4b7351c35267b2cec0513430 263 SUPERFAMILY SSF53474 23 258 1.44E-37 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05750 3d47e11c4b7351c35267b2cec0513430 263 PANTHER PTHR22946 1 263 1.8E-116 T 25-04-2016 SMD_RS05750 3d47e11c4b7351c35267b2cec0513430 263 Pfam PF01738 Dienelactone hydrolase family 39 258 1.1E-39 T 25-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SMD_RS05750 3d47e11c4b7351c35267b2cec0513430 263 Gene3D G3DSA:3.40.50.1820 23 258 1.6E-43 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 Gene3D G3DSA:2.30.40.10 359 366 2.5E-13 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 Gene3D G3DSA:2.30.40.10 2 58 2.5E-13 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 Pfam PF01979 Amidohydrolase family 54 378 6.8E-26 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 377 3.9E-98 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 PANTHER PTHR11113 1 378 6.2E-145 T 25-04-2016 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 SUPERFAMILY SSF51556 57 351 6.12E-99 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 Gene3D G3DSA:2.30.40.10 336 358 3.9E-7 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 PIRSF PIRSF038994 1 381 1.8E-112 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 Gene3D G3DSA:3.20.20.140 59 335 2.6E-91 T 25-04-2016 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 SUPERFAMILY SSF51338 3 57 2.88E-15 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 SUPERFAMILY SSF51338 351 377 2.88E-15 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18715 6219fc0498c0e038fb171678c467e120 382 PANTHER PTHR11113:SF7 1 378 6.2E-145 T 25-04-2016 SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 1.8E-27 T 25-04-2016 IPR001498 Impact, N-terminal SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 SUPERFAMILY SSF54980 127 195 5.28E-11 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 Gene3D G3DSA:3.30.230.30 4 121 1.5E-45 T 25-04-2016 IPR001498 Impact, N-terminal SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 Gene3D G3DSA:3.30.70.240 127 196 2.8E-11 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 Pfam PF09186 Domain of unknown function (DUF1949) 135 188 3.1E-10 T 25-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 SUPERFAMILY SSF54211 5 121 3.53E-40 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS09525 cb05fd6a3a17d5b1630d5dee7062b7a9 198 PANTHER PTHR16301 4 198 1.9E-59 T 25-04-2016 IPR023582 Impact family SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 622 1.0E-270 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 Pfam PF13932 GidA associated domain 403 617 1.2E-69 T 25-04-2016 IPR026904 GidA associated domain 3 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 PANTHER PTHR11806:SF0 6 625 0.0 T 25-04-2016 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 PANTHER PTHR11806 6 625 0.0 T 25-04-2016 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 SMART SM01228 547 618 1.1E-41 T 25-04-2016 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 25-04-2016 IPR020595 MnmG-related, conserved site SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 SUPERFAMILY SSF51905 8 69 9.67E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 SUPERFAMILY SSF51905 100 262 9.67E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 25-04-2016 IPR020595 MnmG-related, conserved site SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 625 41.97 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 Gene3D G3DSA:3.50.50.60 8 233 2.7E-46 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20890 79d62306e73aba1d2ae6bf7d300598a5 629 Pfam PF01134 Glucose inhibited division protein A 9 399 1.7E-163 T 25-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SMD_RS21850 eb6631b5dbb37368dfcd687d71756667 249 PANTHER PTHR30188:SF4 4 248 2.1E-80 T 25-04-2016 SMD_RS21850 eb6631b5dbb37368dfcd687d71756667 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 248 3.2E-72 T 25-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SMD_RS21850 eb6631b5dbb37368dfcd687d71756667 249 PANTHER PTHR30188 4 248 2.1E-80 T 25-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMD_RS21850 eb6631b5dbb37368dfcd687d71756667 249 Pfam PF02405 Permease MlaE 35 245 2.1E-66 T 25-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMD_RS11095 fcd2df0d27b0c76fc7cac65b54480e60 647 Pfam PF01841 Transglutaminase-like superfamily 276 349 1.3E-8 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS11095 fcd2df0d27b0c76fc7cac65b54480e60 647 SUPERFAMILY SSF54001 269 352 6.87E-10 T 25-04-2016 SMD_RS11095 fcd2df0d27b0c76fc7cac65b54480e60 647 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 62 228 1.8E-34 T 25-04-2016 IPR024618 Domain of unknown function DUF3857 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 Gene3D G3DSA:1.10.287.130 201 237 5.0E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 8.1E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 8.1E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 8.1E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 SUPERFAMILY SSF55874 275 402 1.57E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 PANTHER PTHR24423 180 406 2.2E-16 T 25-04-2016 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 402 8.8E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 SUPERFAMILY SSF47384 196 240 1.45E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 SMART SM00387 299 403 6.9E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09095 65458f65dcc9b350ec2e6ce6eb3024a3 408 Gene3D G3DSA:3.30.565.10 287 402 1.5E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 PANTHER PTHR11571:SF139 1 227 1.1E-122 T 25-04-2016 SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 Gene3D G3DSA:3.40.30.10 1 102 1.1E-38 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 Gene3D G3DSA:1.20.1050.10 103 204 6.4E-46 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 SUPERFAMILY SSF47616 100 220 2.7E-18 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 Pfam PF14497 Glutathione S-transferase, C-terminal domain 109 215 8.2E-25 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 PANTHER PTHR11571 1 227 1.1E-122 T 25-04-2016 SMD_RS17345 a38c81bfa08c385dfb718994e793fbe1 236 SUPERFAMILY SSF52833 1 82 6.38E-13 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 SUPERFAMILY SSF52172 1 171 1.12E-33 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 SMART SM00448 1 112 1.7E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 PANTHER PTHR26402 1 222 1.4E-68 T 25-04-2016 SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 5.1E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 PANTHER PTHR26402:SF578 1 222 1.4E-68 T 25-04-2016 SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 SMART SM00862 145 220 6.6E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 Gene3D G3DSA:1.10.10.10 125 221 5.4E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07640 a21f6a2c5eb7d75548b9f1d007ac5517 223 Gene3D G3DSA:3.40.50.2300 1 119 1.5E-31 T 25-04-2016 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 Gene3D G3DSA:3.40.190.10 177 259 3.7E-10 T 25-04-2016 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 PANTHER PTHR30537:SF5 1 291 6.6E-101 T 25-04-2016 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.2E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 Gene3D G3DSA:3.40.190.10 91 176 1.7E-23 T 25-04-2016 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 SUPERFAMILY SSF53850 89 291 4.34E-45 T 25-04-2016 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 SUPERFAMILY SSF46785 1 111 1.26E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.1E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.1E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.1E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 Gene3D G3DSA:1.10.10.10 1 84 2.2E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 Pfam PF03466 LysR substrate binding domain 89 291 4.9E-43 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS03870 a0586cc2347848a8fcc5b2f630d9dcd7 294 PANTHER PTHR30537 1 291 6.6E-101 T 25-04-2016 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 Pfam PF00171 Aldehyde dehydrogenase family 17 480 7.4E-145 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 SUPERFAMILY SSF53720 6 487 3.93E-147 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 Gene3D G3DSA:3.40.605.10 7 264 4.2E-100 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 PANTHER PTHR11699 1 488 0.0 T 25-04-2016 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 484 4.3E-225 T 25-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 PANTHER PTHR11699:SF181 1 488 0.0 T 25-04-2016 SMD_RS01350 e813eef8a40b3f1e823fd5018738e547 501 Gene3D G3DSA:3.40.309.10 265 445 1.3E-67 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS14120 c2739f67ea7fceb68105bcd4871c669b 328 SUPERFAMILY SSF90123 104 204 9.03E-5 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 4.4E-137 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 25-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 9.6E-94 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 SUPERFAMILY SSF81442 44 558 3.01E-177 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 25-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PANTHER PTHR10422 33 613 0.0 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 Gene3D G3DSA:1.20.210.10 41 586 2.9E-185 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS20645 22ae78519684b4bec5c7fc937494f7a5 658 PANTHER PTHR10422:SF26 33 613 0.0 T 25-04-2016 SMD_RS16295 00e6537835dd281af90dd2fb5d7dad51 416 PANTHER PTHR34289:SF3 40 413 1.0E-95 T 25-04-2016 SMD_RS16295 00e6537835dd281af90dd2fb5d7dad51 416 PANTHER PTHR34289 40 413 1.0E-95 T 25-04-2016 SMD_RS16295 00e6537835dd281af90dd2fb5d7dad51 416 Pfam PF05684 Protein of unknown function (DUF819) 18 412 1.9E-117 T 25-04-2016 IPR008537 Protein of unknown function DUF819 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 57 130 9.4E-26 T 25-04-2016 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.4E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.4E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.4E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 SMART SM00422 2 71 1.6E-27 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 PANTHER PTHR30204 1 119 8.4E-43 T 25-04-2016 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 SUPERFAMILY SSF46955 2 128 2.23E-32 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 PANTHER PTHR30204:SF18 1 119 8.4E-43 T 25-04-2016 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 1 56 2.6E-23 T 25-04-2016 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF09278 MerR, DNA binding 45 109 1.5E-18 T 25-04-2016 IPR015358 Transcription regulator MerR, DNA binding SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 2 128 1.3E-51 T 25-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 SMD_RS08185 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF00376 MerR family regulatory protein 3 40 1.3E-12 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 Gene3D G3DSA:1.25.40.10 190 359 6.4E-25 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 SMART SM00028 191 224 3.1 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 SMART SM00028 293 326 0.043 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 SMART SM00028 327 360 260.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 SMART SM00028 225 258 0.22 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 PANTHER PTHR23083 194 356 1.8E-20 T 25-04-2016 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 SUPERFAMILY SSF48452 191 356 4.17E-21 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 Pfam PF01841 Transglutaminase-like superfamily 70 131 1.8E-6 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 SUPERFAMILY SSF54001 64 175 1.68E-7 T 25-04-2016 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 Pfam PF13181 Tetratricopeptide repeat 226 255 0.036 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS16035 8029dd81ba6ddd8c7906951e1a398128 383 Pfam PF13181 Tetratricopeptide repeat 296 322 0.019 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 PANTHER PTHR11079:SF10 13 227 1.3E-59 T 25-04-2016 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 SUPERFAMILY SSF53597 151 358 1.29E-57 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 Gene3D G3DSA:3.40.140.10 9 134 3.7E-31 T 25-04-2016 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 105 1.8E-18 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 Gene3D G3DSA:3.40.430.10 135 358 5.2E-67 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 SUPERFAMILY SSF53927 9 150 1.14E-44 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 PANTHER PTHR11079 13 227 1.3E-59 T 25-04-2016 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 Pfam PF01872 RibD C-terminal domain 153 354 1.5E-46 T 25-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 PIRSF PIRSF006769 5 360 3.1E-120 T 25-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 13 355 7.2E-112 T 25-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SMD_RS03305 41e7f8ae60d907077cde9680afe39c07 361 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 358 1.7E-50 T 25-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 SMD_RS14875 9cd284952c912008cd73632193982efd 38 Pfam PF08173 Membrane bound YbgT-like protein 1 27 3.2E-15 T 25-04-2016 IPR012994 Membrane bound YbgT-like SMD_RS14875 9cd284952c912008cd73632193982efd 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.3E-17 T 25-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 SMD_RS14995 ffdabbaad2eaf2fb78f5931780a0342d 281 Pfam PF01551 Peptidase family M23 179 274 6.2E-29 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS14995 ffdabbaad2eaf2fb78f5931780a0342d 281 SUPERFAMILY SSF51261 50 278 7.98E-54 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS14995 ffdabbaad2eaf2fb78f5931780a0342d 281 PANTHER PTHR21666 105 279 3.4E-48 T 25-04-2016 SMD_RS14995 ffdabbaad2eaf2fb78f5931780a0342d 281 Gene3D G3DSA:2.70.70.10 129 279 2.6E-45 T 25-04-2016 SMD_RS14995 ffdabbaad2eaf2fb78f5931780a0342d 281 PANTHER PTHR21666:SF224 105 279 3.4E-48 T 25-04-2016 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 Gene3D G3DSA:3.30.565.10 279 427 6.5E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 426 3.0E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 3.3E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 SMART SM00304 155 207 9.1E-4 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PANTHER PTHR24423 149 426 3.7E-59 T 25-04-2016 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PANTHER PTHR24423 84 100 3.7E-59 T 25-04-2016 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 Gene3D G3DSA:1.10.287.130 198 269 3.2E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 SMART SM00387 318 428 3.7E-31 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 SUPERFAMILY SSF47384 192 272 1.33E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PANTHER PTHR24423:SF564 149 426 3.7E-59 T 25-04-2016 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PANTHER PTHR24423:SF564 84 100 3.7E-59 T 25-04-2016 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 SMART SM00388 208 273 6.9E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 SUPERFAMILY SSF55874 263 426 5.37E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17320 d34cbe02656b923bac89d3cb26403d7b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20955 9c5b532fcc77213cea181adda1c34df1 432 Pfam PF01882 Protein of unknown function DUF58 189 274 4.9E-22 T 25-04-2016 IPR002881 Domain of unknown function DUF58 SMD_RS20955 9c5b532fcc77213cea181adda1c34df1 432 PANTHER PTHR33608 6 432 1.9E-101 T 25-04-2016 SMD_RS20955 9c5b532fcc77213cea181adda1c34df1 432 PANTHER PTHR33608:SF3 6 432 1.9E-101 T 25-04-2016 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 Pfam PF02321 Outer membrane efflux protein 288 474 7.0E-18 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 Pfam PF02321 Outer membrane efflux protein 87 266 9.1E-12 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 Gene3D G3DSA:1.20.1600.10 77 475 4.4E-69 T 25-04-2016 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 PANTHER PTHR30203:SF3 16 475 5.2E-52 T 25-04-2016 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 SUPERFAMILY SSF56954 33 476 2.88E-72 T 25-04-2016 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 38 475 6.8E-63 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS08275 97dcefead9efdd912927a119dbe22bde 487 PANTHER PTHR30203 16 475 5.2E-52 T 25-04-2016 SMD_RS06030 26509f8b96746f3b17a0177dc1210a48 234 Gene3D G3DSA:3.90.226.10 19 181 1.1E-14 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS06030 26509f8b96746f3b17a0177dc1210a48 234 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 3 230 1.1E-78 T 25-04-2016 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 SMD_RS06030 26509f8b96746f3b17a0177dc1210a48 234 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 5 229 1.3E-83 T 25-04-2016 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06030 26509f8b96746f3b17a0177dc1210a48 234 SUPERFAMILY SSF52096 14 205 3.55E-18 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS21665 32abea213ed81d443648b08ff57da043 320 TIGRFAM TIGR00109 hemH: ferrochelatase 6 317 2.1E-90 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 Gene3D G3DSA:3.40.50.1400 5 200 4.1E-62 T 25-04-2016 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 319 34.932 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 PANTHER PTHR11108 1 319 1.6E-112 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 Gene3D G3DSA:3.40.50.1400 201 318 1.3E-31 T 25-04-2016 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 SUPERFAMILY SSF53800 5 319 7.85E-95 T 25-04-2016 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 25-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMD_RS21665 32abea213ed81d443648b08ff57da043 320 Pfam PF00762 Ferrochelatase 7 318 5.8E-100 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 SUPERFAMILY SSF52540 11 232 5.84E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 PANTHER PTHR24220:SF111 13 233 1.1E-115 T 25-04-2016 SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 SMART SM00382 40 228 1.1E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 Pfam PF00005 ABC transporter 32 179 2.5E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 Gene3D G3DSA:3.40.50.300 10 232 1.1E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 PANTHER PTHR24220 13 233 1.1E-115 T 25-04-2016 SMD_RS09185 e2fbf91d54eb7c8169c5384489d2c7dd 237 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 11 230 4.7E-101 T 25-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 9 205 27.881 T 25-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 Pfam PF01728 FtsJ-like methyltransferase 30 204 2.4E-49 T 25-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 Gene3D G3DSA:3.40.50.150 3 207 1.9E-70 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 PIRSF PIRSF005461 1 210 4.2E-72 T 25-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 SUPERFAMILY SSF53335 28 205 7.5E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 PANTHER PTHR10920 1 210 4.5E-118 T 25-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SMD_RS08830 8409ce521e5c54f45550d98a991da9ee 210 PANTHER PTHR10920:SF20 1 210 4.5E-118 T 25-04-2016 SMD_RS03235 8645ff5445be711f67083deb9dc49c0e 854 PANTHER PTHR30451 45 836 1.3E-265 T 25-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SMD_RS03235 8645ff5445be711f67083deb9dc49c0e 854 SUPERFAMILY SSF141729 69 186 2.22E-28 T 25-04-2016 SMD_RS03235 8645ff5445be711f67083deb9dc49c0e 854 Pfam PF13953 PapC C-terminal domain 772 836 1.9E-23 T 25-04-2016 IPR025949 PapC-like, C-terminal domain SMD_RS03235 8645ff5445be711f67083deb9dc49c0e 854 PANTHER PTHR30451:SF1 45 836 1.3E-265 T 25-04-2016 SMD_RS03235 8645ff5445be711f67083deb9dc49c0e 854 Pfam PF13954 PapC N-terminal domain 48 195 8.5E-41 T 25-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 SMD_RS03235 8645ff5445be711f67083deb9dc49c0e 854 Pfam PF00577 Outer membrane usher protein 212 763 7.2E-173 T 25-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SMD_RS11945 a9b73fa1c4c38b205de8d4ade32904f4 141 SUPERFAMILY SSF54593 2 132 6.85E-24 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS11945 a9b73fa1c4c38b205de8d4ade32904f4 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 128 1.2E-10 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS11945 a9b73fa1c4c38b205de8d4ade32904f4 141 PANTHER PTHR36437 1 135 2.9E-22 T 25-04-2016 SMD_RS11945 a9b73fa1c4c38b205de8d4ade32904f4 141 Gene3D G3DSA:3.10.180.10 1 134 1.5E-19 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS14750 327f162e8a5eefcfeecd516b296f27b6 91 PIRSF PIRSF003113 1 91 4.5E-28 T 25-04-2016 IPR002634 BolA protein SMD_RS14750 327f162e8a5eefcfeecd516b296f27b6 91 Gene3D G3DSA:3.30.70.1500 6 86 1.9E-27 T 25-04-2016 SMD_RS14750 327f162e8a5eefcfeecd516b296f27b6 91 SUPERFAMILY SSF82657 4 89 1.22E-26 T 25-04-2016 IPR002634 BolA protein SMD_RS14750 327f162e8a5eefcfeecd516b296f27b6 91 PANTHER PTHR12735 1 89 3.8E-34 T 25-04-2016 SMD_RS14750 327f162e8a5eefcfeecd516b296f27b6 91 Pfam PF01722 BolA-like protein 13 89 1.1E-29 T 25-04-2016 IPR002634 BolA protein SMD_RS14750 327f162e8a5eefcfeecd516b296f27b6 91 PANTHER PTHR12735:SF24 1 89 3.8E-34 T 25-04-2016 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 7 85 1.0E-37 T 25-04-2016 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 86 6.5E-38 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.64 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 Pfam PF00312 Ribosomal protein S15 6 85 7.6E-38 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 PANTHER PTHR23321 3 86 4.2E-43 T 25-04-2016 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 Gene3D G3DSA:1.10.287.10 4 86 2.6E-38 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 SUPERFAMILY SSF47060 4 86 1.03E-34 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 SMART SM01387 5 85 4.4E-51 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS15375 c95527e2fa72ea9ddc864de762973703 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 TIGRFAM TIGR02695 azurin: azurin 24 146 4.2E-53 T 25-04-2016 IPR014068 Azurin, proteobacteria SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 145 8.9E-20 T 25-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 PANTHER PTHR38439 1 149 2.9E-43 T 25-04-2016 SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 149 6.0E-46 T 25-04-2016 SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 126 142 - T 25-04-2016 IPR028871 Blue (type 1) copper protein, binding site SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 Gene3D G3DSA:2.60.40.420 24 147 1.6E-49 T 25-04-2016 IPR008972 Cupredoxin SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 SUPERFAMILY SSF49503 23 147 6.31E-41 T 25-04-2016 IPR008972 Cupredoxin SMD_RS18030 4e666433bf2b7f1bb9d7d6c67b1e1f94 149 PANTHER PTHR38439:SF2 1 149 2.9E-43 T 25-04-2016 SMD_RS05420 daacdb2505f629d9a2503d2213f7f8ea 130 SUPERFAMILY SSF53062 4 124 2.35E-23 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMD_RS05420 daacdb2505f629d9a2503d2213f7f8ea 130 PANTHER PTHR33799 3 130 1.3E-32 T 25-04-2016 SMD_RS05420 daacdb2505f629d9a2503d2213f7f8ea 130 Pfam PF03610 PTS system fructose IIA component 4 103 4.7E-12 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMD_RS05420 daacdb2505f629d9a2503d2213f7f8ea 130 Gene3D G3DSA:3.40.50.510 3 124 1.3E-25 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMD_RS20390 35e9a7a91639a874a3b2249a7857e815 291 PANTHER PTHR10138:SF0 4 282 1.3E-97 T 25-04-2016 SMD_RS20390 35e9a7a91639a874a3b2249a7857e815 291 PANTHER PTHR10138 4 282 1.3E-97 T 25-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 SMD_RS20390 35e9a7a91639a874a3b2249a7857e815 291 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 282 38.871 T 25-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 SMD_RS20390 35e9a7a91639a874a3b2249a7857e815 291 SUPERFAMILY SSF140959 23 282 1.96E-96 T 25-04-2016 SMD_RS20390 35e9a7a91639a874a3b2249a7857e815 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 12 147 2.3E-41 T 25-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 SMD_RS20390 35e9a7a91639a874a3b2249a7857e815 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 207 282 4.7E-21 T 25-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PANTHER PTHR24322:SF105 130 258 7.8E-65 T 25-04-2016 SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PANTHER PTHR24322:SF105 274 306 7.8E-65 T 25-04-2016 SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 Gene3D G3DSA:3.40.50.720 121 365 1.1E-76 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 295 312 4.894878E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 329 349 4.894878E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 213 4.894878E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 274 293 4.894878E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 144 4.894878E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 248 264 4.894878E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PANTHER PTHR24322 130 258 7.8E-65 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PANTHER PTHR24322 274 306 7.8E-65 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 261 289 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 135 365 8.0E-54 T 25-04-2016 SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 SUPERFAMILY SSF51735 124 365 5.6E-71 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 274 293 8.440056E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 213 8.440056E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS00475 672c4414360de17618b6bc54b9003da3 368 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 254 262 8.440056E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01160 262aa2fed3db612736197cd1f27f801e 200 SMART SM00563 50 162 1.6E-19 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS01160 262aa2fed3db612736197cd1f27f801e 200 PANTHER PTHR10434:SF9 21 191 2.8E-50 T 25-04-2016 SMD_RS01160 262aa2fed3db612736197cd1f27f801e 200 Pfam PF01553 Acyltransferase 50 158 2.1E-11 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS01160 262aa2fed3db612736197cd1f27f801e 200 PANTHER PTHR10434 21 191 2.8E-50 T 25-04-2016 SMD_RS01160 262aa2fed3db612736197cd1f27f801e 200 SUPERFAMILY SSF69593 21 175 1.09E-16 T 25-04-2016 SMD_RS21155 1c6c5af599a7933ba4d1d1c540ed2755 318 SUPERFAMILY SSF51430 4 314 1.57E-91 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21155 1c6c5af599a7933ba4d1d1c540ed2755 318 PANTHER PTHR11732 2 314 1.8E-134 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS21155 1c6c5af599a7933ba4d1d1c540ed2755 318 PANTHER PTHR11732:SF132 2 314 1.8E-134 T 25-04-2016 SMD_RS21155 1c6c5af599a7933ba4d1d1c540ed2755 318 Pfam PF00248 Aldo/keto reductase family 16 314 1.2E-65 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21155 1c6c5af599a7933ba4d1d1c540ed2755 318 Gene3D G3DSA:3.20.20.100 4 315 4.2E-92 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 PANTHER PTHR10799 16 159 1.6E-22 T 25-04-2016 SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 PANTHER PTHR10799 213 335 1.6E-22 T 25-04-2016 SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 335 5.3E-39 T 25-04-2016 IPR000160 GGDEF domain SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 SMART SM00100 25 140 2.1E-16 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 SUPERFAMILY SSF51206 29 150 3.14E-23 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 PANTHER PTHR10799:SF750 16 159 1.6E-22 T 25-04-2016 SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 PANTHER PTHR10799:SF750 213 335 1.6E-22 T 25-04-2016 SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 89 107 - T 25-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 SMART SM00267 172 340 8.5E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 Gene3D G3DSA:3.30.70.270 183 342 6.8E-44 T 25-04-2016 SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 Pfam PF00027 Cyclic nucleotide-binding domain 45 128 1.8E-18 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 183 338 6.0E-36 T 25-04-2016 IPR000160 GGDEF domain SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 Gene3D G3DSA:2.60.120.10 29 150 1.9E-22 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS01210 9b737b63b8b4e582b6b1e094ae6768a0 346 SUPERFAMILY SSF55073 187 341 1.33E-40 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 Gene3D G3DSA:3.90.1150.10 256 390 9.5E-55 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 PANTHER PTHR11808:SF15 2 390 3.6E-210 T 25-04-2016 SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 Gene3D G3DSA:3.40.640.10 13 255 2.4E-96 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 389 4.1E-161 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 SUPERFAMILY SSF53383 16 389 1.03E-122 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 PANTHER PTHR11808 2 390 3.6E-210 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS02890 e5e59f621ec793a7c2edc5f90cf80751 390 PIRSF PIRSF001434 2 390 8.3E-147 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 SUPERFAMILY SSF56349 99 378 3.53E-54 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 Gene3D G3DSA:1.10.443.10 205 378 2.9E-28 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 Pfam PF00589 Phage integrase family 207 371 3.4E-19 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 3.6E-17 T 25-04-2016 IPR025166 Domain of unknown function DUF4102 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 155 5.3E-9 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 Gene3D G3DSA:1.10.150.130 98 193 2.6E-12 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 PANTHER PTHR30629:SF2 1 357 1.3E-37 T 25-04-2016 SMD_RS04645 b7cc2431689dc028820fb17c4a816747 399 PANTHER PTHR30629 1 357 1.3E-37 T 25-04-2016 SMD_RS20420 dae4ec75bdf2e30300c3d2e9a2514088 235 PANTHER PTHR34580 1 231 4.8E-40 T 25-04-2016 SMD_RS20420 dae4ec75bdf2e30300c3d2e9a2514088 235 Pfam PF13280 WYL domain 139 229 7.3E-17 T 25-04-2016 IPR026881 WYL domain SMD_RS20420 dae4ec75bdf2e30300c3d2e9a2514088 235 Pfam PF08279 HTH domain 6 60 3.1E-15 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMD_RS20420 dae4ec75bdf2e30300c3d2e9a2514088 235 PANTHER PTHR34580:SF3 1 231 4.8E-40 T 25-04-2016 SMD_RS20420 dae4ec75bdf2e30300c3d2e9a2514088 235 SUPERFAMILY SSF46785 3 63 1.36E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20420 dae4ec75bdf2e30300c3d2e9a2514088 235 Gene3D G3DSA:1.10.10.10 1 63 6.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 Pfam PF00482 Type II secretion system (T2SS), protein F 268 390 6.1E-27 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 Pfam PF00482 Type II secretion system (T2SS), protein F 66 188 3.2E-31 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 398 6.3E-155 T 25-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 2.0E-28 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 2.0E-28 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 61 73 2.0E-28 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 2.0E-28 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 PANTHER PTHR30012:SF5 2 399 3.0E-187 T 25-04-2016 SMD_RS12605 6ca21e239fdca09b7e085349fea6f143 399 PANTHER PTHR30012 2 399 3.0E-187 T 25-04-2016 SMD_RS09100 04afd09b9116561d5397eb933733b56f 421 Pfam PF04551 GcpE protein 22 409 4.9E-109 T 25-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMD_RS09100 04afd09b9116561d5397eb933733b56f 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 413 29.378 T 25-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMD_RS09100 04afd09b9116561d5397eb933733b56f 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 409 2.6E-119 T 25-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMD_RS09100 04afd09b9116561d5397eb933733b56f 421 PIRSF PIRSF004640 12 419 2.9E-126 T 25-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMD_RS09100 04afd09b9116561d5397eb933733b56f 421 PANTHER PTHR30454 4 418 1.2E-153 T 25-04-2016 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 2.1E-11 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 2.1E-11 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 Gene3D G3DSA:3.30.700.10 13 114 4.4E-20 T 25-04-2016 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 32 3.6E-8 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 PANTHER PTHR30093:SF4 6 69 8.5E-23 T 25-04-2016 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 SUPERFAMILY SSF54523 13 124 1.88E-25 T 25-04-2016 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 PANTHER PTHR30093 6 69 8.5E-23 T 25-04-2016 SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.8E-7 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07595 fce59bf6eacef17b3613f5c6bfd17d75 135 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 118 6.0E-25 T 25-04-2016 IPR031982 Type IV minor pilin ComP SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 Pfam PF08544 GHMP kinases C terminal 213 268 2.7E-7 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 SUPERFAMILY SSF54211 12 166 8.35E-42 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 PIRSF PIRSF010376 9 287 2.8E-82 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 Gene3D G3DSA:3.30.70.890 170 286 2.9E-34 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 276 30.904 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 PANTHER PTHR20861 13 282 4.4E-78 T 25-04-2016 SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 Gene3D G3DSA:3.30.230.10 13 166 7.1E-52 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 Pfam PF00288 GHMP kinases N terminal domain 94 151 1.2E-7 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 285 2.0E-71 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 PANTHER PTHR20861:SF2 13 282 4.4E-78 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS04010 607fd14145260cb38b56d265fa1a50b4 289 SUPERFAMILY SSF55060 168 284 8.27E-26 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMD_RS11245 abea498e995879831a48819bec3cb082 656 Pfam PF03239 Iron permease FTR1 family 329 507 1.9E-19 T 25-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 SMD_RS11245 abea498e995879831a48819bec3cb082 656 Pfam PF03239 Iron permease FTR1 family 510 597 2.3E-8 T 25-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 SMD_RS11245 abea498e995879831a48819bec3cb082 656 PANTHER PTHR31632:SF4 382 617 1.3E-50 T 25-04-2016 SMD_RS11245 abea498e995879831a48819bec3cb082 656 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 132 214 5.2E-11 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS11245 abea498e995879831a48819bec3cb082 656 SUPERFAMILY SSF46626 116 220 2.96E-18 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS11245 abea498e995879831a48819bec3cb082 656 Gene3D G3DSA:1.10.760.10 124 222 5.7E-17 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS11245 abea498e995879831a48819bec3cb082 656 PANTHER PTHR31632 382 617 1.3E-50 T 25-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 SMD_RS10715 f4fdc5ff2827bbe677e72ab38a2cb85b 102 Pfam PF13466 STAS domain 4 82 5.7E-14 T 25-04-2016 IPR002645 STAS domain SMD_RS10715 f4fdc5ff2827bbe677e72ab38a2cb85b 102 Gene3D G3DSA:3.30.750.24 3 87 8.5E-9 T 25-04-2016 IPR002645 STAS domain SMD_RS10715 f4fdc5ff2827bbe677e72ab38a2cb85b 102 SUPERFAMILY SSF52091 3 88 3.14E-10 T 25-04-2016 IPR002645 STAS domain SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 Gene3D G3DSA:3.40.190.10 105 192 6.0E-20 T 25-04-2016 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 4.3E-21 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 Gene3D G3DSA:1.10.10.10 17 99 2.6E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 PANTHER PTHR30126 17 322 4.5E-98 T 25-04-2016 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 Pfam PF03466 LysR substrate binding domain 104 306 1.4E-49 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 Gene3D G3DSA:3.40.190.10 193 275 7.2E-25 T 25-04-2016 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 PANTHER PTHR30126:SF11 17 322 4.5E-98 T 25-04-2016 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 SUPERFAMILY SSF53850 106 308 1.3E-45 T 25-04-2016 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 6.4E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 6.4E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 6.4E-10 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01195 23c0cec1f8c8ea929201483b4985c79d 322 SUPERFAMILY SSF46785 17 97 1.41E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03040 9f93a0b1a0fa96f43ee490fbfc9845b2 373 PANTHER PTHR30188 36 373 1.7E-161 T 25-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMD_RS03040 9f93a0b1a0fa96f43ee490fbfc9845b2 373 PANTHER PTHR30188:SF3 36 373 1.7E-161 T 25-04-2016 SMD_RS03040 9f93a0b1a0fa96f43ee490fbfc9845b2 373 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 133 366 4.4E-70 T 25-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SMD_RS03040 9f93a0b1a0fa96f43ee490fbfc9845b2 373 Pfam PF02405 Permease MlaE 157 365 2.4E-69 T 25-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMD_RS13410 f1b8a198c5efb8ebb31f762530a66cc6 204 PANTHER PTHR35369 1 201 3.8E-65 T 25-04-2016 SMD_RS13410 f1b8a198c5efb8ebb31f762530a66cc6 204 PIRSF PIRSF037290 4 204 3.4E-72 T 25-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 SMD_RS13410 f1b8a198c5efb8ebb31f762530a66cc6 204 Gene3D G3DSA:3.40.50.300 49 162 5.3E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13410 f1b8a198c5efb8ebb31f762530a66cc6 204 PANTHER PTHR35369:SF1 1 201 3.8E-65 T 25-04-2016 SMD_RS13410 f1b8a198c5efb8ebb31f762530a66cc6 204 SUPERFAMILY SSF52540 50 161 2.55E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 PANTHER PTHR14359:SF20 13 419 4.6E-193 T 25-04-2016 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 Gene3D G3DSA:3.40.50.10300 204 419 4.0E-83 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 15 414 4.1E-132 T 25-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 SUPERFAMILY SSF52507 15 189 1.14E-56 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 Pfam PF02441 Flavoprotein 19 146 3.8E-31 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 Gene3D G3DSA:3.40.50.1950 15 190 2.4E-60 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 SUPERFAMILY SSF102645 205 418 2.35E-73 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 206 388 3.1E-69 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMD_RS01830 e62942c9d64ec1fc68d6178b38546f18 420 PANTHER PTHR14359 13 419 4.6E-193 T 25-04-2016 SMD_RS18875 41871dd2cffc0f55dfe216f46c200073 381 PANTHER PTHR34138:SF1 20 351 6.2E-75 T 25-04-2016 SMD_RS18875 41871dd2cffc0f55dfe216f46c200073 381 Pfam PF04085 rod shape-determining protein MreC 134 274 6.3E-34 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SMD_RS18875 41871dd2cffc0f55dfe216f46c200073 381 PANTHER PTHR34138 20 351 6.2E-75 T 25-04-2016 SMD_RS18875 41871dd2cffc0f55dfe216f46c200073 381 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 20 276 1.8E-50 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 PANTHER PTHR24220:SF86 11 240 5.5E-95 T 25-04-2016 SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 Pfam PF02687 FtsX-like permease family 535 648 1.7E-17 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 SMART SM00382 38 225 7.8E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 SUPERFAMILY SSF52540 9 232 3.71E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 Pfam PF12704 MacB-like periplasmic core domain 279 497 1.9E-39 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 Gene3D G3DSA:3.40.50.300 8 229 2.7E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 PANTHER PTHR24220 11 240 5.5E-95 T 25-04-2016 SMD_RS13905 8aba04294663abd39ed15b973c9977e4 654 Pfam PF00005 ABC transporter 29 177 1.9E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS06620 36558456fed63b2cbbae918a33225278 149 SUPERFAMILY SSF46785 4 139 9.63E-36 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06620 36558456fed63b2cbbae918a33225278 149 Gene3D G3DSA:1.10.10.10 4 107 2.8E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06620 36558456fed63b2cbbae918a33225278 149 PANTHER PTHR33204 2 149 6.0E-52 T 25-04-2016 SMD_RS06620 36558456fed63b2cbbae918a33225278 149 Pfam PF01638 HxlR-like helix-turn-helix 15 99 9.3E-19 T 25-04-2016 IPR002577 Helix-turn-helix, HxlR type SMD_RS06620 36558456fed63b2cbbae918a33225278 149 PANTHER PTHR33204:SF3 2 149 6.0E-52 T 25-04-2016 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 Pfam PF03702 Uncharacterised protein family (UPF0075) 14 376 1.1E-143 T 25-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 PANTHER PTHR30605:SF0 7 377 1.3E-157 T 25-04-2016 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 13 378 41.231 T 25-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 Gene3D G3DSA:3.30.420.40 156 337 9.7E-68 T 25-04-2016 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 SUPERFAMILY SSF53067 14 47 2.1E-25 T 25-04-2016 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 SUPERFAMILY SSF53067 154 351 2.1E-25 T 25-04-2016 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 SUPERFAMILY SSF53067 77 122 2.1E-25 T 25-04-2016 SMD_RS01905 51502f1e2f86646d47a4c965e81d6af7 378 PANTHER PTHR30605 7 377 1.3E-157 T 25-04-2016 SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 Pfam PF00199 Catalase 70 348 2.1E-21 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 PANTHER PTHR11465 4 354 1.9E-113 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 PIRSF PIRSF000296 20 354 2.2E-113 T 25-04-2016 IPR024168 Catalase, SrpA-type, predicted SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 Gene3D G3DSA:2.40.180.10 50 355 1.8E-74 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 PANTHER PTHR11465:SF16 4 354 1.9E-113 T 25-04-2016 SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 SMART SM01060 43 367 1.2E-4 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS01705 79bd87e3037ba8b8a3e610c0dbea6565 367 SUPERFAMILY SSF56634 39 350 3.79E-84 T 25-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PANTHER PTHR30620 102 645 1.5E-191 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PANTHER PTHR30620 9 81 1.5E-191 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 Gene3D G3DSA:3.40.50.1700 417 644 9.1E-64 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 156 175 4.2E-20 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 132 148 4.2E-20 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 243 259 4.2E-20 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 4.2E-20 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 PRINTS PR00133 Glycosyl hydrolase family 3 signature 313 331 4.2E-20 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 66 390 5.6E-75 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 SUPERFAMILY SSF52279 431 646 1.1E-47 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 431 645 3.2E-35 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 Gene3D G3DSA:3.20.20.300 53 399 4.7E-103 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11755 6695cd14e1a44ebd8d918a77f6f57fdc 849 SUPERFAMILY SSF51445 48 430 1.68E-104 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 PANTHER PTHR23309:SF11 18 679 1.6E-231 T 25-04-2016 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Gene3D G3DSA:3.40.50.720 309 491 1.2E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 SUPERFAMILY SSF51735 311 488 2.27E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 SUPERFAMILY SSF48179 597 675 3.23E-17 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 SUPERFAMILY SSF48179 489 590 1.79E-23 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Gene3D G3DSA:1.10.1040.10 606 675 6.2E-12 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Gene3D G3DSA:3.90.226.10 12 209 3.3E-61 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 207 1.7E-38 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 SUPERFAMILY SSF52096 10 305 4.12E-67 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Gene3D G3DSA:1.10.1040.10 492 581 1.2E-20 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 490 580 2.4E-17 T 25-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 PANTHER PTHR23309 18 679 1.6E-231 T 25-04-2016 SMD_RS16260 a9d4df9e5f07331d298a590981e5dbba 687 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 485 9.6E-47 T 25-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.4E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 PANTHER PTHR30537:SF5 1 293 4.1E-105 T 25-04-2016 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 SUPERFAMILY SSF53850 92 297 5.25E-46 T 25-04-2016 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 Gene3D G3DSA:3.40.190.10 93 168 1.0E-7 T 25-04-2016 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 Gene3D G3DSA:3.40.190.10 169 261 9.7E-22 T 25-04-2016 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 SUPERFAMILY SSF46785 6 87 8.65E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 Gene3D G3DSA:1.10.10.10 7 86 2.0E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 PANTHER PTHR30537 1 293 4.1E-105 T 25-04-2016 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-42 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18550 d45cc70a42a481c9c4afd2fe1485f7b9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS14925 fcb36c01c4ce2a39ff27b1ec80e5adab 87 Pfam PF03795 YCII-related domain 6 85 6.7E-8 T 25-04-2016 IPR005545 YCII-related SMD_RS14925 fcb36c01c4ce2a39ff27b1ec80e5adab 87 SUPERFAMILY SSF54909 5 85 2.06E-12 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS14925 fcb36c01c4ce2a39ff27b1ec80e5adab 87 PANTHER PTHR37828 1 85 5.4E-23 T 25-04-2016 SMD_RS14925 fcb36c01c4ce2a39ff27b1ec80e5adab 87 Gene3D G3DSA:3.30.70.1060 6 85 5.9E-9 T 25-04-2016 SMD_RS14925 fcb36c01c4ce2a39ff27b1ec80e5adab 87 PANTHER PTHR37828:SF1 1 85 5.4E-23 T 25-04-2016 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 PANTHER PTHR32060 9 620 2.4E-269 T 25-04-2016 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 Pfam PF03572 Peptidase family S41 363 544 1.1E-52 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 566 7.6E-90 T 25-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 317 2.8E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 Gene3D G3DSA:2.30.42.10 244 336 1.8E-18 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 SUPERFAMILY SSF50156 243 315 7.78E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 PANTHER PTHR32060:SF11 9 620 2.4E-269 T 25-04-2016 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 Gene3D G3DSA:3.90.226.10 337 549 4.4E-60 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS18815 60b293d70b55b9025355e8befada169a 725 SUPERFAMILY SSF52096 170 262 2.98E-67 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS18815 60b293d70b55b9025355e8befada169a 725 SUPERFAMILY SSF52096 357 552 2.98E-67 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS18815 60b293d70b55b9025355e8befada169a 725 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 550 700 2.3E-39 T 25-04-2016 IPR020992 Tail specific protease, C-terminal SMD_RS18815 60b293d70b55b9025355e8befada169a 725 SMART SM00228 244 322 7.8E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS18815 60b293d70b55b9025355e8befada169a 725 SMART SM00245 327 547 2.4E-50 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 SUPERFAMILY SSF46689 219 263 3.05E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 SUPERFAMILY SSF51182 24 191 1.53E-20 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 PANTHER PTHR11019 11 265 8.2E-70 T 25-04-2016 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 Pfam PF02311 AraC-like ligand binding domain 33 150 2.6E-10 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 PANTHER PTHR11019:SF99 11 265 8.2E-70 T 25-04-2016 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 Gene3D G3DSA:2.60.120.10 31 100 2.5E-12 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 Pfam PF12833 Helix-turn-helix domain 188 265 1.4E-19 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 Gene3D G3DSA:1.10.10.60 161 219 4.1E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 SMART SM00342 182 264 9.0E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 3.3E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 3.3E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS09495 b3600ae6937736d32d8d6dc0f22581a3 265 Gene3D G3DSA:1.10.10.60 220 263 5.2E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18515 b2aafc4659291596c090434932d33d70 148 Gene3D G3DSA:3.40.50.620 1 141 6.7E-32 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS18515 b2aafc4659291596c090434932d33d70 148 PRINTS PR01438 Universal stress protein signature 121 143 2.0E-6 T 25-04-2016 IPR006015 Universal stress protein A SMD_RS18515 b2aafc4659291596c090434932d33d70 148 PRINTS PR01438 Universal stress protein signature 2 20 2.0E-6 T 25-04-2016 IPR006015 Universal stress protein A SMD_RS18515 b2aafc4659291596c090434932d33d70 148 PRINTS PR01438 Universal stress protein signature 103 115 2.0E-6 T 25-04-2016 IPR006015 Universal stress protein A SMD_RS18515 b2aafc4659291596c090434932d33d70 148 SUPERFAMILY SSF52402 1 141 4.4E-30 T 25-04-2016 SMD_RS18515 b2aafc4659291596c090434932d33d70 148 PANTHER PTHR31964:SF26 1 141 5.7E-23 T 25-04-2016 SMD_RS18515 b2aafc4659291596c090434932d33d70 148 Pfam PF00582 Universal stress protein family 1 141 1.3E-25 T 25-04-2016 IPR006016 UspA GO:0006950 SMD_RS18515 b2aafc4659291596c090434932d33d70 148 PANTHER PTHR31964 1 141 5.7E-23 T 25-04-2016 SMD_RS18255 337758d8bc2a2b6ed1dc005346f29d91 363 SUPERFAMILY SSF53686 16 308 1.31E-76 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS18255 337758d8bc2a2b6ed1dc005346f29d91 363 Gene3D G3DSA:3.40.50.1100 143 307 3.9E-28 T 25-04-2016 SMD_RS18255 337758d8bc2a2b6ed1dc005346f29d91 363 PANTHER PTHR10314:SF17 8 325 5.4E-110 T 25-04-2016 SMD_RS18255 337758d8bc2a2b6ed1dc005346f29d91 363 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 292 8.3E-69 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS18255 337758d8bc2a2b6ed1dc005346f29d91 363 Gene3D G3DSA:3.40.50.1100 57 142 8.0E-29 T 25-04-2016 SMD_RS18255 337758d8bc2a2b6ed1dc005346f29d91 363 PANTHER PTHR10314 8 325 5.4E-110 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 1.3E-125 T 25-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SUPERFAMILY SSF54814 205 282 2.94E-29 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SUPERFAMILY SSF54814 283 346 8.5E-15 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 PANTHER PTHR22648 1 452 7.4E-171 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SMART SM00322 234 297 18.0 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SMART SM00322 305 368 8.9E-4 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Gene3D G3DSA:3.30.300.20 203 281 1.1E-33 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.542 T 25-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 PANTHER PTHR22648:SF0 1 452 7.4E-171 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Gene3D G3DSA:3.30.1480.10 1 128 1.1E-42 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 494 7.4E-14 T 25-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 1.1E-21 T 25-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Pfam PF00575 S1 RNA binding domain 135 199 2.6E-7 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Pfam PF13184 NusA-like KH domain 234 301 1.0E-27 T 25-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Pfam PF14520 Helix-hairpin-helix domain 371 416 0.0014 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Pfam PF14520 Helix-hairpin-helix domain 436 492 8.9E-6 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SMART SM00316 137 204 9.2E-7 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SUPERFAMILY SSF47794 429 493 6.91E-9 T 25-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Gene3D G3DSA:1.10.150.20 433 493 1.5E-13 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Gene3D G3DSA:1.10.150.20 360 423 2.7E-21 T 25-04-2016 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SUPERFAMILY SSF50249 135 203 2.03E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Pfam PF08529 NusA N-terminal domain 4 128 1.0E-36 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SUPERFAMILY SSF47794 360 419 2.98E-16 T 25-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Gene3D G3DSA:3.30.300.20 282 350 2.0E-27 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 Gene3D G3DSA:2.40.50.140 133 202 3.2E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15395 4ea77e796d99a0272d430bba4db7b6cc 503 SUPERFAMILY SSF69705 1 130 4.19E-37 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 Gene3D G3DSA:2.40.170.20 174 811 2.9E-92 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 SUPERFAMILY SSF56935 34 811 2.05E-108 T 25-04-2016 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 PANTHER PTHR30069 12 811 1.4E-98 T 25-04-2016 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 Gene3D G3DSA:2.170.130.10 48 173 8.7E-32 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 Pfam PF00593 TonB dependent receptor 497 809 3.9E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 171 8.3E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS17370 0e6abdd8056a03ebed481dcfdc3c2cb5 811 PANTHER PTHR30069:SF4 12 811 1.4E-98 T 25-04-2016 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 SUPERFAMILY SSF50952 61 97 3.27E-30 T 25-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 SUPERFAMILY SSF50952 126 434 3.27E-30 T 25-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 PANTHER PTHR19328:SF26 44 100 7.0E-164 T 25-04-2016 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 PANTHER PTHR19328:SF26 130 435 7.0E-164 T 25-04-2016 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 Pfam PF07995 Glucose / Sorbosone dehydrogenase 79 361 7.6E-15 T 25-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 PANTHER PTHR19328 44 100 7.0E-164 T 25-04-2016 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 PANTHER PTHR19328 130 435 7.0E-164 T 25-04-2016 SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 Gene3D G3DSA:2.120.10.30 64 434 4.0E-59 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS20605 76b9c7a34a8dcd2f666d54347926dd57 436 Gene3D G3DSA:2.120.10.30 14 22 4.0E-59 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS02175 ce96dcd64c7258257401074b707fdd0f 479 Pfam PF12913 SH3 domain (SH3b1 type) 170 216 6.6E-15 T 25-04-2016 SMD_RS02175 ce96dcd64c7258257401074b707fdd0f 479 Gene3D G3DSA:3.90.1720.10 326 473 2.1E-20 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS02175 ce96dcd64c7258257401074b707fdd0f 479 Pfam PF00877 NlpC/P60 family 335 427 2.3E-11 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS02175 ce96dcd64c7258257401074b707fdd0f 479 SUPERFAMILY SSF54001 321 426 4.71E-16 T 25-04-2016 SMD_RS02175 ce96dcd64c7258257401074b707fdd0f 479 PIRSF PIRSF019015 13 478 2.9E-78 T 25-04-2016 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type SMD_RS02175 ce96dcd64c7258257401074b707fdd0f 479 Pfam PF12914 SH3 domain of SH3b2 type 224 274 5.7E-9 T 25-04-2016 IPR026864 SH3b2-type SH3 domain SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 PIRSF PIRSF018005 2 324 3.2E-111 T 25-04-2016 IPR017804 Methyltransferase EgtD-like SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 PANTHER PTHR30468:SF6 19 322 1.2E-71 T 25-04-2016 SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 196 318 5.3E-39 T 25-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 Gene3D G3DSA:3.40.50.150 56 200 4.9E-5 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 Gene3D G3DSA:3.40.50.150 287 312 4.9E-5 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 22 319 6.4E-112 T 25-04-2016 IPR017804 Methyltransferase EgtD-like SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 PANTHER PTHR30468 19 322 1.2E-71 T 25-04-2016 SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 SUPERFAMILY SSF53335 22 229 2.81E-10 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21755 7b49513179fbfce9a9ddd14767b23835 324 SUPERFAMILY SSF53335 286 311 2.81E-10 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS01800 a163acb32b7f9faa41c7acc63c36b473 155 Pfam PF07308 Protein of unknown function (DUF1456) 3 72 4.8E-22 T 25-04-2016 IPR009921 Domain of unknown function DUF1456 SMD_RS01800 a163acb32b7f9faa41c7acc63c36b473 155 Pfam PF07308 Protein of unknown function (DUF1456) 88 155 1.2E-24 T 25-04-2016 IPR009921 Domain of unknown function DUF1456 SMD_RS01800 a163acb32b7f9faa41c7acc63c36b473 155 PANTHER PTHR37805:SF1 1 155 6.9E-65 T 25-04-2016 SMD_RS01800 a163acb32b7f9faa41c7acc63c36b473 155 PANTHER PTHR37805 1 155 6.9E-65 T 25-04-2016 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 Gene3D G3DSA:1.10.730.10 583 678 5.7E-5 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 551 4.7E-191 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PANTHER PTHR30075 7 691 0.0 T 25-04-2016 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 Pfam PF05746 DALR anticodon binding domain 583 678 2.5E-6 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 689 6.3E-203 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 3.1E-29 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 3.1E-29 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 3.1E-29 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 3.1E-29 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 3.1E-29 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 SUPERFAMILY SSF109604 352 488 6.83E-13 T 25-04-2016 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 PANTHER PTHR30075:SF2 7 691 0.0 T 25-04-2016 SMD_RS21620 82ecdce0958de85a9478dd7431de1396 691 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 689 24.551 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS01150 75c82a62f80bf486ceb41c63ff210ef9 175 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 101 159 6.1E-18 T 25-04-2016 IPR018637 Domain of unknown function DUF2059 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 PANTHER PTHR34069:SF2 180 338 7.5E-60 T 25-04-2016 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 PANTHER PTHR34069:SF2 2 164 7.5E-60 T 25-04-2016 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 Gene3D G3DSA:3.40.47.10 189 338 1.8E-27 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 PANTHER PTHR34069 180 338 7.5E-60 T 25-04-2016 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 PANTHER PTHR34069 2 164 7.5E-60 T 25-04-2016 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 6.1E-8 T 25-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 Gene3D G3DSA:3.40.47.10 4 188 2.5E-36 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 SUPERFAMILY SSF53901 45 338 7.41E-41 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS01070 6459e4e4db6ce3140b6dddf8e73145ec 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.0E-18 T 25-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 SUPERFAMILY SSF46785 4 111 2.99E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 PANTHER PTHR30537:SF13 1 308 2.4E-143 T 25-04-2016 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 Gene3D G3DSA:3.40.190.10 90 174 6.6E-9 T 25-04-2016 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 PANTHER PTHR30537 1 308 2.4E-143 T 25-04-2016 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 Gene3D G3DSA:3.40.190.10 175 258 1.3E-25 T 25-04-2016 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 SUPERFAMILY SSF53850 89 294 1.05E-47 T 25-04-2016 SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 Gene3D G3DSA:1.10.10.10 3 85 1.9E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02735 139b60118d76e8c6c30dbde444a99931 309 Pfam PF03466 LysR substrate binding domain 89 289 3.9E-43 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS21635 6d949774c9306ed2e17c78e8b969e1f2 248 Gene3D G3DSA:3.40.50.880 10 223 6.6E-50 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS21635 6d949774c9306ed2e17c78e8b969e1f2 248 Pfam PF00117 Glutamine amidotransferase class-I 56 192 1.2E-19 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS21635 6d949774c9306ed2e17c78e8b969e1f2 248 PANTHER PTHR11922 58 189 1.7E-33 T 25-04-2016 SMD_RS21635 6d949774c9306ed2e17c78e8b969e1f2 248 SUPERFAMILY SSF52317 28 207 2.01E-40 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 SUPERFAMILY SSF56801 422 961 1.7E-150 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Pfam PF00550 Phosphopantetheine attachment site 951 1012 8.1E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:3.40.50.980 600 757 1.2E-48 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:2.30.38.10 758 835 6.0E-26 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 ProSitePatterns PS00455 Putative AMP-binding domain signature. 591 602 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Pfam PF00975 Thioesterase domain 1042 1235 2.3E-25 T 25-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:3.40.50.980 448 599 4.0E-42 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 477 867 1.2E-133 T 25-04-2016 IPR010071 Amino acid adenylation domain SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Pfam PF00668 Condensation domain 8 295 1.1E-26 T 25-04-2016 IPR001242 Condensation domain SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 SUPERFAMILY SSF52777 12 196 1.45E-28 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 SUPERFAMILY SSF52777 187 442 2.78E-29 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 PANTHER PTHR24095:SF137 12 1017 2.2E-263 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 SUPERFAMILY SSF53474 1028 1283 6.97E-44 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 SMART SM00824 Thioesterase 1049 1279 0.0025 T 25-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Pfam PF13193 AMP-binding enzyme C-terminal domain 853 925 1.1E-6 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:3.40.50.1820 1037 1145 7.7E-37 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:3.40.50.1820 1217 1291 7.7E-37 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Pfam PF00501 AMP-binding enzyme 458 845 2.3E-95 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 SUPERFAMILY SSF47336 942 1014 1.14E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:1.10.1200.10 942 1017 1.3E-19 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 PANTHER PTHR24095 12 1017 2.2E-263 T 25-04-2016 SMD_RS12925 6311d2468a9713e8051da33c2b9845a0 1296 Gene3D G3DSA:3.30.300.30 839 936 5.2E-32 T 25-04-2016 SMD_RS11075 ee85b4b1f9bd5e5eaad76fefe1a92885 374 PANTHER PTHR31384 33 304 1.7E-46 T 25-04-2016 SMD_RS11075 ee85b4b1f9bd5e5eaad76fefe1a92885 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 371 2.3E-139 T 25-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition SMD_RS11075 ee85b4b1f9bd5e5eaad76fefe1a92885 374 PANTHER PTHR31384:SF26 33 304 1.7E-46 T 25-04-2016 SMD_RS11075 ee85b4b1f9bd5e5eaad76fefe1a92885 374 SUPERFAMILY SSF55729 183 352 1.02E-35 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS11075 ee85b4b1f9bd5e5eaad76fefe1a92885 374 Gene3D G3DSA:3.40.630.30 175 321 4.9E-20 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS18050 2b3330dd12feadcd31f56682bf4eae92 314 Pfam PF12889 Protein of unknown function (DUF3829) 33 312 1.0E-51 T 25-04-2016 IPR024291 Protein of unknown function DUF3829 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Pfam PF00258 Flavodoxin 385 507 4.0E-21 T 25-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 SUPERFAMILY SSF52343 703 840 3.01E-34 T 25-04-2016 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Gene3D G3DSA:3.40.50.80 711 840 7.7E-35 T 25-04-2016 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PRINTS PR00369 Flavodoxin signature 463 473 1.9E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PRINTS PR00369 Flavodoxin signature 432 443 1.9E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PRINTS PR00369 Flavodoxin signature 384 397 1.9E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PANTHER PTHR19384 374 840 1.7E-78 T 25-04-2016 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Gene3D G3DSA:3.40.50.360 379 520 1.6E-33 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 709 728 1.1E-5 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 646 653 1.1E-5 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 746 757 1.1E-5 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Gene3D G3DSA:2.40.30.10 540 581 2.1E-6 T 25-04-2016 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Gene3D G3DSA:2.40.30.10 643 710 2.1E-6 T 25-04-2016 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Pfam PF00175 Oxidoreductase NAD-binding domain 710 814 7.2E-11 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 SUPERFAMILY SSF52218 381 524 5.79E-36 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 SUPERFAMILY SSF63380 536 701 5.35E-18 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 Pfam PF03929 PepSY-associated TM region 7 357 4.5E-53 T 25-04-2016 IPR005625 PepSY-associated TM protein SMD_RS19845 5e326489a84f7791e6a3168c859cca76 840 PANTHER PTHR19384:SF17 374 840 1.7E-78 T 25-04-2016 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 SMART SM00934 13 230 6.3E-70 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 3.6E-65 T 25-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 31.607 T 25-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 230 1.3E-42 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 PANTHER PTHR32119:SF2 1 241 2.1E-92 T 25-04-2016 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 PANTHER PTHR32119 1 241 2.1E-92 T 25-04-2016 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 25-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 Gene3D G3DSA:3.20.20.70 11 234 3.7E-66 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00400 dbef9a814ad78965f50713c43dfa045f 241 SUPERFAMILY SSF51366 8 237 8.48E-56 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 Gene3D G3DSA:1.10.357.10 4 183 1.1E-30 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 6.0E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 PANTHER PTHR30055 1 146 3.0E-15 T 25-04-2016 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 SUPERFAMILY SSF46689 4 82 1.69E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.3E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.3E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 PANTHER PTHR30055:SF49 1 146 3.0E-15 T 25-04-2016 SMD_RS06730 11bee5567758fd175f1fdffc7962cead 188 SUPERFAMILY SSF48498 77 181 1.78E-11 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 SUPERFAMILY SSF53706 1 641 5.37E-225 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Gene3D G3DSA:2.40.40.20 679 809 1.4E-44 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Gene3D G3DSA:2.40.40.20 606 647 1.4E-44 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615:SF126 397 481 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615:SF126 1 182 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615:SF126 320 380 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615:SF126 579 649 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615:SF126 673 809 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615:SF126 210 279 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Pfam PF01568 Molydopterin dinucleotide binding domain 687 800 4.6E-14 T 25-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 808 0.0 T 25-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Gene3D G3DSA:3.40.50.740 320 470 3.3E-59 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Pfam PF00384 Molybdopterin oxidoreductase 2 377 2.2E-23 T 25-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Gene3D G3DSA:3.40.228.10 152 261 7.6E-73 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 Gene3D G3DSA:3.40.228.10 1 108 7.6E-73 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 SUPERFAMILY SSF50692 620 650 2.28E-41 T 25-04-2016 IPR009010 Aspartate decarboxylase-like domain SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 SUPERFAMILY SSF50692 680 809 2.28E-41 T 25-04-2016 IPR009010 Aspartate decarboxylase-like domain SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615 397 481 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615 1 182 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615 320 380 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615 579 649 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615 673 809 2.6E-233 T 25-04-2016 SMD_RS17890 74fef2f856d74c0ded5606109ead2427 809 PANTHER PTHR11615 210 279 2.6E-233 T 25-04-2016 SMD_RS14730 9b451dc71b269089344a1c50fac43f36 446 PANTHER PTHR30061:SF20 15 436 3.4E-145 T 25-04-2016 SMD_RS14730 9b451dc71b269089344a1c50fac43f36 446 Pfam PF13416 Bacterial extracellular solute-binding protein 48 361 4.3E-40 T 25-04-2016 SMD_RS14730 9b451dc71b269089344a1c50fac43f36 446 Gene3D G3DSA:3.40.190.10 160 352 1.0E-47 T 25-04-2016 SMD_RS14730 9b451dc71b269089344a1c50fac43f36 446 Gene3D G3DSA:3.40.190.10 32 159 2.3E-24 T 25-04-2016 SMD_RS14730 9b451dc71b269089344a1c50fac43f36 446 SUPERFAMILY SSF53850 32 412 2.02E-86 T 25-04-2016 SMD_RS14730 9b451dc71b269089344a1c50fac43f36 446 PANTHER PTHR30061 15 436 3.4E-145 T 25-04-2016 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 PANTHER PTHR24220 5 355 7.1E-157 T 25-04-2016 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 PANTHER PTHR24220:SF151 5 355 7.1E-157 T 25-04-2016 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 Pfam PF08402 TOBE domain 281 352 1.6E-8 T 25-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 SMART SM00382 29 212 4.1E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 Gene3D G3DSA:2.40.50.140 286 344 5.6E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 Gene3D G3DSA:3.40.50.300 4 235 3.0E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 Pfam PF00005 ABC transporter 21 162 5.8E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 SUPERFAMILY SSF52540 4 243 2.18E-84 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 SUPERFAMILY SSF50331 237 360 9.72E-26 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 Gene3D G3DSA:2.40.50.100 346 359 2.1E-7 T 25-04-2016 SMD_RS09140 a120e1dc7716c08619809c7e5da629f6 360 Gene3D G3DSA:2.40.50.100 240 285 2.1E-7 T 25-04-2016 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PANTHER PTHR30161 2 702 0.0 T 25-04-2016 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PIRSF PIRSF005419 9 702 4.3E-239 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 701 3.9E-255 T 25-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 Pfam PF00771 FHIPEP family 32 692 2.3E-260 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.4E-51 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.4E-51 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.4E-51 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.4E-51 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.4E-51 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.4E-51 T 25-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMD_RS10770 fe72558c9fc051ed50990655865320a3 702 PANTHER PTHR30161:SF1 2 702 0.0 T 25-04-2016 SMD_RS00310 005e70b6b462f19baee8b17d3132991c 273 SMART SM00382 38 235 2.9E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS00310 005e70b6b462f19baee8b17d3132991c 273 Gene3D G3DSA:3.40.50.300 9 252 1.0E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00310 005e70b6b462f19baee8b17d3132991c 273 PANTHER PTHR24220:SF557 15 268 4.0E-74 T 25-04-2016 SMD_RS00310 005e70b6b462f19baee8b17d3132991c 273 PANTHER PTHR24220 15 268 4.0E-74 T 25-04-2016 SMD_RS00310 005e70b6b462f19baee8b17d3132991c 273 SUPERFAMILY SSF52540 6 250 3.69E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00310 005e70b6b462f19baee8b17d3132991c 273 Pfam PF00005 ABC transporter 29 186 1.2E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 16 178 1.5E-12 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 18 172 4.3E-11 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 PANTHER PTHR18901:SF25 11 204 6.6E-76 T 25-04-2016 SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 PANTHER PTHR18901 11 204 6.6E-76 T 25-04-2016 SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 68 178 9.6E-18 T 25-04-2016 IPR023214 HAD-like domain SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 Gene3D G3DSA:3.40.50.1000 14 28 1.1E-29 T 25-04-2016 IPR023214 HAD-like domain SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 Gene3D G3DSA:3.40.50.1000 77 202 1.1E-29 T 25-04-2016 IPR023214 HAD-like domain SMD_RS18890 383c9a7d1399cd4652f2370fc753e83a 206 SUPERFAMILY SSF56784 12 195 7.34E-35 T 25-04-2016 IPR023214 HAD-like domain SMD_RS04990 c1d83503efa779038e3bb4c149ff27c4 129 Pfam PF14534 Domain of unknown function (DUF4440) 16 119 2.0E-16 T 25-04-2016 IPR027843 Domain of unknown function DUF4440 SMD_RS04990 c1d83503efa779038e3bb4c149ff27c4 129 Gene3D G3DSA:3.10.450.50 13 126 1.0E-15 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS04990 c1d83503efa779038e3bb4c149ff27c4 129 SUPERFAMILY SSF54427 15 126 2.06E-19 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 SUPERFAMILY SSF51366 3 243 4.63E-64 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 PANTHER PTHR21235:SF15 1 244 1.8E-95 T 25-04-2016 SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 240 3.8E-74 T 25-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 32.955 T 25-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 PANTHER PTHR21235 1 244 1.8E-95 T 25-04-2016 SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 Pfam PF00977 Histidine biosynthesis protein 5 236 7.4E-71 T 25-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMD_RS10285 2e1e4ba95b31d843c3df4a53e7605908 244 Gene3D G3DSA:3.20.20.70 5 243 1.5E-73 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 Gene3D G3DSA:3.30.70.1400 19 102 7.3E-17 T 25-04-2016 SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 206 275 4.1E-5 T 25-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 Pfam PF01571 Aminomethyltransferase folate-binding domain 22 105 1.6E-5 T 25-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 167 231 4.0E-21 T 25-04-2016 IPR017703 YgfZ/GcvT conserved site SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 SUPERFAMILY SSF103025 11 222 1.44E-41 T 25-04-2016 SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 PANTHER PTHR22602 2 267 8.7E-34 T 25-04-2016 SMD_RS09145 6787d82afe7d352d752df02f691a534b 291 PANTHER PTHR22602:SF0 2 267 8.7E-34 T 25-04-2016 SMD_RS10815 fe7166030210fb49645a159e202b78df 171 PANTHER PTHR35091:SF1 5 171 3.7E-55 T 25-04-2016 SMD_RS10815 fe7166030210fb49645a159e202b78df 171 Pfam PF03748 Flagellar basal body-associated protein FliL 69 171 6.0E-24 T 25-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SMD_RS10815 fe7166030210fb49645a159e202b78df 171 PANTHER PTHR35091 5 171 3.7E-55 T 25-04-2016 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 SUPERFAMILY SSF46955 1 125 3.66E-37 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.1E-18 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.9E-14 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.9E-14 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.9E-14 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 Gene3D G3DSA:1.10.1660.10 1 55 1.4E-27 T 25-04-2016 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 PANTHER PTHR30204:SF18 1 115 2.5E-39 T 25-04-2016 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 SMART SM00422 1 70 4.7E-33 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 Gene3D G3DSA:1.10.1660.10 56 130 5.7E-29 T 25-04-2016 SMD_RS13520 c7840ff611cbb4386c964b43b773eb12 132 PANTHER PTHR30204 1 115 2.5E-39 T 25-04-2016 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 383 631 1.0E-35 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 SMART SM00939 368 632 1.1E-83 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 Gene3D G3DSA:3.40.50.1820 280 396 2.8E-81 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 Gene3D G3DSA:3.40.50.1820 13 207 2.8E-81 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 SUPERFAMILY SSF53474 49 403 4.83E-44 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 Gene3D G3DSA:2.60.120.260 397 635 3.5E-85 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 51 635 6.3E-67 T 25-04-2016 IPR005674 CocE/Serine esterase GO:0016787 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 PANTHER PTHR11731 46 222 3.0E-57 T 25-04-2016 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 SUPERFAMILY SSF49785 411 635 9.35E-71 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 PANTHER PTHR11731:SF151 46 222 3.0E-57 T 25-04-2016 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 55 341 6.2E-71 T 25-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 SMD_RS13355 951b55ea1dc1f7806c992357cb893150 636 Gene3D G3DSA:1.10.3020.10 208 279 2.8E-24 T 25-04-2016 SMD_RS15110 1d139f0491a9bdd93e4dd40422890489 298 Gene3D G3DSA:3.30.2010.10 108 184 4.9E-14 T 25-04-2016 SMD_RS15110 1d139f0491a9bdd93e4dd40422890489 298 PANTHER PTHR22726:SF1 25 296 3.8E-68 T 25-04-2016 SMD_RS15110 1d139f0491a9bdd93e4dd40422890489 298 PANTHER PTHR22726 25 296 3.8E-68 T 25-04-2016 SMD_RS15110 1d139f0491a9bdd93e4dd40422890489 298 Pfam PF01435 Peptidase family M48 120 281 2.2E-33 T 25-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 PANTHER PTHR30389:SF1 2 505 0.0 T 25-04-2016 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.0E-47 T 25-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 PIRSF PIRSF001394 1 505 9.3E-219 T 25-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.4E-99 T 25-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 Gene3D G3DSA:3.20.130.10 311 487 1.0E-71 T 25-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 4.5E-61 T 25-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 PANTHER PTHR30389 2 505 0.0 T 25-04-2016 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 Pfam PF05683 Fumarase C-terminus 289 488 4.7E-80 T 25-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMD_RS14590 5109d79534db15c16ee538e13b0c5897 505 SUPERFAMILY SSF117457 318 487 9.42E-62 T 25-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 SUPERFAMILY SSF52743 93 135 1.7E-53 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 SUPERFAMILY SSF52743 191 491 1.7E-53 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795:SF419 92 134 4.6E-21 T 25-04-2016 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795:SF419 190 233 4.6E-21 T 25-04-2016 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795:SF419 160 174 4.6E-21 T 25-04-2016 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795:SF419 401 490 4.6E-21 T 25-04-2016 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795:SF419 317 357 4.6E-21 T 25-04-2016 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795:SF419 258 295 4.6E-21 T 25-04-2016 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 Gene3D G3DSA:2.40.128.130 814 1116 5.0E-53 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 Pfam PF03797 Autotransporter beta-domain 840 1099 4.0E-45 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 Gene3D G3DSA:3.40.50.200 87 490 2.3E-55 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 431 441 - T 25-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PRINTS PR00723 Subtilisin serine protease family (S8) signature 430 446 4.2E-13 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PRINTS PR00723 Subtilisin serine protease family (S8) signature 112 131 4.2E-13 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PRINTS PR00723 Subtilisin serine protease family (S8) signature 194 207 4.2E-13 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 650 1116 9.5E-46 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 SUPERFAMILY SSF103515 802 1116 1.7E-57 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795 92 134 4.6E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795 190 233 4.6E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795 160 174 4.6E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795 401 490 4.6E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795 317 357 4.6E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 PANTHER PTHR10795 258 295 4.6E-21 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 Pfam PF00082 Subtilase family 112 481 6.8E-35 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS19325 aff43fd061c65c9f3ea95bfb325c5685 1116 SMART SM00869 841 1106 3.4E-44 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 Pfam PF01245 Ribosomal protein L19 8 116 1.5E-45 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 PIRSF PIRSF002191 1 133 2.0E-47 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 SUPERFAMILY SSF50104 8 121 1.0E-41 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 25-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 4.0E-44 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 PANTHER PTHR15680 1 123 6.4E-46 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 28.219 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 PRINTS PR00061 Ribosomal protein L19 signature 8 37 4.3E-36 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 PRINTS PR00061 Ribosomal protein L19 signature 92 117 4.3E-36 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06435 bb7c4996753dcdca7d1f4b7143795e25 133 PRINTS PR00061 Ribosomal protein L19 signature 38 67 4.3E-36 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1088 0.0 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 34 1113 29.095 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Gene3D G3DSA:3.40.50.300 592 791 8.4E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SUPERFAMILY SSF52540 358 470 5.84E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SMART SM01058 484 581 5.4E-49 T 25-04-2016 IPR003711 CarD-like/TRCF domain SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SUPERFAMILY SSF52540 21 345 2.88E-95 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Pfam PF03461 TRCF domain 1015 1107 1.2E-27 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Gene3D G3DSA:3.30.2060.10 136 214 1.0E-12 T 25-04-2016 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SUPERFAMILY SSF143517 1006 1152 1.7E-42 T 25-04-2016 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Pfam PF02559 CarD-like/TRCF domain 485 579 3.7E-24 T 25-04-2016 IPR003711 CarD-like/TRCF domain SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 PANTHER PTHR14025:SF21 389 1148 0.0 T 25-04-2016 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SMART SM00490 831 915 2.5E-19 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SUPERFAMILY SSF141259 476 553 9.94E-22 T 25-04-2016 IPR003711 CarD-like/TRCF domain SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SMART SM00487 605 801 2.1E-35 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Gene3D G3DSA:3.40.50.300 803 961 8.2E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SUPERFAMILY SSF52540 528 789 1.33E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Pfam PF00270 DEAD/DEAH box helicase 610 767 1.2E-16 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 PANTHER PTHR14025 389 1148 0.0 T 25-04-2016 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SUPERFAMILY SSF52540 787 995 1.27E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 SMART SM00982 1014 1114 2.0E-50 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SMD_RS06670 70ab8e154e1e9887c155937069f6f198 1154 Pfam PF00271 Helicase conserved C-terminal domain 815 914 1.9E-17 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 Pfam PF00210 Ferritin-like domain 8 144 5.5E-39 T 25-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 44 64 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 128 149 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 65 85 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 86 106 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 3 22 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 23 43 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PRINTS PR00601 Bacterioferritin signature 107 127 2.7E-67 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PANTHER PTHR30295:SF0 1 156 6.6E-47 T 25-04-2016 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PANTHER PTHR30295 1 156 6.6E-47 T 25-04-2016 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 SUPERFAMILY SSF47240 1 153 4.06E-53 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.3E-71 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 PIRSF PIRSF002560 1 156 6.0E-70 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS20195 c62126f9fcdfa321eebac76039e79450 156 Gene3D G3DSA:1.20.1260.10 1 155 3.5E-64 T 25-04-2016 IPR012347 Ferritin-related SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 PANTHER PTHR30537 1 309 1.2E-96 T 25-04-2016 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.6E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.6E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.6E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 Pfam PF03466 LysR substrate binding domain 95 292 5.1E-36 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 PANTHER PTHR30537:SF16 1 309 1.2E-96 T 25-04-2016 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 Gene3D G3DSA:3.40.190.10 96 179 1.1E-27 T 25-04-2016 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 SUPERFAMILY SSF46785 8 86 1.43E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 SUPERFAMILY SSF53850 95 296 8.21E-36 T 25-04-2016 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 7.6E-19 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 Gene3D G3DSA:3.40.190.10 180 261 4.2E-13 T 25-04-2016 SMD_RS06895 d3649d0d77a8de1f716249a19babfb43 314 Gene3D G3DSA:1.10.10.10 6 86 6.7E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 PANTHER PTHR36999 1 740 0.0 T 25-04-2016 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 SUPERFAMILY SSF53659 2 738 0.0 T 25-04-2016 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 735 0.0 T 25-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 PIRSF PIRSF009407 1 739 0.0 T 25-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 739 0.0 T 25-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 Gene3D G3DSA:3.40.718.10 536 642 7.7E-36 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 Gene3D G3DSA:3.40.718.10 337 360 7.7E-36 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS20085 a1d2b02bdace27a39a5feee620b46a8a 740 Gene3D G3DSA:3.40.718.10 144 282 7.7E-36 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SMART SM00091 46 116 0.69 T 25-04-2016 IPR000014 PAS domain SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SMART SM00091 170 238 0.0066 T 25-04-2016 IPR000014 PAS domain SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PANTHER PTHR24422 418 584 4.3E-168 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PANTHER PTHR24422 33 355 4.3E-168 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 Gene3D G3DSA:1.10.287.950 358 563 3.4E-58 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SUPERFAMILY SSF58104 310 592 1.13E-64 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SUPERFAMILY SSF55785 180 282 1.52E-25 T 25-04-2016 IPR000014 PAS domain SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 Gene3D G3DSA:3.30.450.20 181 284 8.0E-24 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 Gene3D G3DSA:3.30.450.20 60 162 4.2E-22 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 Pfam PF08447 PAS fold 71 156 4.5E-14 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 Pfam PF08447 PAS fold 193 278 4.5E-13 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SUPERFAMILY SSF55785 60 164 4.99E-24 T 25-04-2016 IPR000014 PAS domain SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 401 590 2.5E-55 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PANTHER PTHR24422:SF12 418 584 4.3E-168 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PANTHER PTHR24422:SF12 33 355 4.3E-168 T 25-04-2016 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 471 500 1.1E-47 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 519 548 1.1E-47 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 469 1.1E-47 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 394 1.1E-47 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 54 165 4.1E-13 T 25-04-2016 IPR000014 PAS domain SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 291 2.4E-15 T 25-04-2016 IPR000014 PAS domain SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SMART SM00283 344 591 6.5E-82 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SMART SM00086 243 285 2.8E-4 T 25-04-2016 IPR001610 PAC motif SMD_RS13580 3dd33b83d9fa7e5a230a2b159ae89f88 608 SMART SM00086 121 163 9.7E-6 T 25-04-2016 IPR001610 PAC motif SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 PANTHER PTHR10060:SF13 1 263 1.2E-157 T 25-04-2016 SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 SUPERFAMILY SSF51556 3 261 4.38E-81 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 PIRSF PIRSF005902 1 264 2.8E-71 T 25-04-2016 IPR001130 TatD family GO:0016788 SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 Gene3D G3DSA:3.20.20.140 1 261 3.6E-85 T 25-04-2016 SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 Pfam PF01026 TatD related DNase 4 259 9.2E-68 T 25-04-2016 IPR001130 TatD family GO:0016788 SMD_RS21130 f7e87a80b7d2a178767d0594ea95d8b3 265 PANTHER PTHR10060 1 263 1.2E-157 T 25-04-2016 IPR001130 TatD family GO:0016788 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 Gene3D G3DSA:3.20.20.70 1 339 1.4E-125 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 PANTHER PTHR11938 5 338 1.0E-92 T 25-04-2016 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 PIRSF PIRSF000164 14 345 4.2E-94 T 25-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 SUPERFAMILY SSF51395 1 338 2.87E-102 T 25-04-2016 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 1.5E-128 T 25-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 Pfam PF01180 Dihydroorotate dehydrogenase 46 337 5.3E-90 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMD_RS10105 21e56b429ac47de157d1ba5b088adf97 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 50.811 T 25-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS05925 e56c35c824c579461c778e666b35a8f1 74 SMART SM00530 6 62 2.5E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS05925 e56c35c824c579461c778e666b35a8f1 74 Gene3D G3DSA:1.10.260.40 1 68 7.9E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05925 e56c35c824c579461c778e666b35a8f1 74 SUPERFAMILY SSF47413 1 68 1.3E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05925 e56c35c824c579461c778e666b35a8f1 74 PANTHER PTHR37301 2 63 2.2E-23 T 25-04-2016 SMD_RS05925 e56c35c824c579461c778e666b35a8f1 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 67 3.2E-20 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS14060 dd4c0a3b4fef44aea4cf04c0c13e04f9 284 Pfam PF05013 N-formylglutamate amidohydrolase 15 238 4.1E-64 T 25-04-2016 IPR007709 N-formylglutamate amidohydrolase SMD_RS14060 dd4c0a3b4fef44aea4cf04c0c13e04f9 284 SUPERFAMILY SSF53187 4 279 9.63E-76 T 25-04-2016 SMD_RS14060 dd4c0a3b4fef44aea4cf04c0c13e04f9 284 Gene3D G3DSA:3.40.630.40 1 279 3.8E-89 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS14060 dd4c0a3b4fef44aea4cf04c0c13e04f9 284 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 279 3.0E-116 T 25-04-2016 IPR010247 N-formylglutamate deformylase SMD_RS16905 d692a128394871c22f44ef6aa25c6773 178 PANTHER PTHR38107 3 178 3.8E-34 T 25-04-2016 SMD_RS16905 d692a128394871c22f44ef6aa25c6773 178 PANTHER PTHR38107:SF2 3 178 3.8E-34 T 25-04-2016 SMD_RS16905 d692a128394871c22f44ef6aa25c6773 178 SUPERFAMILY SSF53955 13 176 9.21E-23 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS16905 d692a128394871c22f44ef6aa25c6773 178 Gene3D G3DSA:1.10.530.40 19 177 3.2E-21 T 25-04-2016 IPR023347 Lysozyme domain GO:0003796 SMD_RS16905 d692a128394871c22f44ef6aa25c6773 178 Pfam PF00959 Phage lysozyme 92 149 2.9E-5 T 25-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PANTHER PTHR11922:SF7 1 191 4.6E-96 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 Gene3D G3DSA:3.40.50.880 3 191 5.0E-67 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.2E-35 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.2E-35 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.2E-35 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.2E-35 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.2E-35 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.2E-35 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 2.4E-78 T 25-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PANTHER PTHR11922 1 191 4.6E-96 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 Pfam PF00117 Glutamine amidotransferase class-I 4 190 9.3E-56 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 SUPERFAMILY SSF52317 1 191 4.58E-55 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.0E-13 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.0E-13 T 25-04-2016 SMD_RS20270 54f6f23f38c532339364f0b61ebb6527 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.0E-13 T 25-04-2016 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 Gene3D G3DSA:1.10.150.130 107 146 1.1E-4 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 Pfam PF00589 Phage integrase family 215 362 2.9E-17 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 SUPERFAMILY SSF56349 92 368 1.38E-33 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 Gene3D G3DSA:1.10.443.10 183 369 2.7E-26 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 PANTHER PTHR30349 170 196 3.4E-22 T 25-04-2016 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 PANTHER PTHR30349 212 368 3.4E-22 T 25-04-2016 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 PANTHER PTHR30349 97 151 3.4E-22 T 25-04-2016 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 PANTHER PTHR30349:SF20 170 196 3.4E-22 T 25-04-2016 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 PANTHER PTHR30349:SF20 212 368 3.4E-22 T 25-04-2016 SMD_RS08320 c59802b9fc1834bafcf8a3abfe656180 371 PANTHER PTHR30349:SF20 97 151 3.4E-22 T 25-04-2016 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 PANTHER PTHR10210 1 317 5.0E-180 T 25-04-2016 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 SMART SM01400 7 124 2.8E-70 T 25-04-2016 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 PANTHER PTHR10210:SF41 1 317 5.0E-180 T 25-04-2016 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 SUPERFAMILY SSF53271 72 307 2.32E-61 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 Gene3D G3DSA:3.40.50.2020 163 292 4.5E-51 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 25-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 317 2.6E-116 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 Gene3D G3DSA:3.40.50.2020 3 162 4.5E-72 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 1.1E-45 T 25-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 318 48.189 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMD_RS04020 26e8beaac8102791f9001f18c98efbdf 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 2.4E-30 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMD_RS16200 6d3ad2047614c16f5a76cb9bd179e1a7 161 SMART SM01118 2 155 2.3E-20 T 25-04-2016 IPR023577 CYTH domain SMD_RS16200 6d3ad2047614c16f5a76cb9bd179e1a7 161 Gene3D G3DSA:2.40.320.10 1 158 1.4E-53 T 25-04-2016 IPR023577 CYTH domain SMD_RS16200 6d3ad2047614c16f5a76cb9bd179e1a7 161 SUPERFAMILY SSF55154 1 155 1.08E-38 T 25-04-2016 IPR033469 CYTH-like domain SMD_RS16200 6d3ad2047614c16f5a76cb9bd179e1a7 161 PIRSF PIRSF016487 1 161 6.6E-61 T 25-04-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like SMD_RS16200 6d3ad2047614c16f5a76cb9bd179e1a7 161 Pfam PF01928 CYTH domain 3 145 1.0E-15 T 25-04-2016 IPR023577 CYTH domain SMD_RS16200 6d3ad2047614c16f5a76cb9bd179e1a7 161 PANTHER PTHR40114 2 161 1.1E-48 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 SUPERFAMILY SSF52402 480 620 1.44E-72 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 SUPERFAMILY SSF52402 246 395 1.44E-72 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 Gene3D G3DSA:3.60.20.10 1 210 1.4E-46 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 Pfam PF13537 Glutamine amidotransferase domain 58 164 9.2E-28 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 PANTHER PTHR11772 473 633 1.4E-128 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 PANTHER PTHR11772 3 397 1.4E-128 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 PANTHER PTHR11772:SF10 473 633 1.4E-128 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 PANTHER PTHR11772:SF10 3 397 1.4E-128 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 PIRSF PIRSF001589 1 633 2.6E-111 T 25-04-2016 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 Pfam PF00733 Asparagine synthase 255 625 2.2E-85 T 25-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 6 560 2.4E-96 T 25-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 SUPERFAMILY SSF56235 1 211 1.54E-42 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 Gene3D G3DSA:3.40.50.620 226 409 4.4E-72 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS02815 e3eb19dd50f447f9727f4ea894e9c42e 633 Gene3D G3DSA:3.40.50.620 476 625 4.4E-72 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS09995 ca008e89a542dbbbf13374712b06b204 120 Pfam PF11287 Protein of unknown function (DUF3088) 8 116 8.6E-36 T 25-04-2016 IPR021439 Protein of unknown function DUF3088 SMD_RS19955 67e3646d8b383c07bbc8ec0665e6be39 331 Pfam PF01148 Cytidylyltransferase family 58 323 3.3E-64 T 25-04-2016 SMD_RS19955 67e3646d8b383c07bbc8ec0665e6be39 331 PANTHER PTHR13773 29 324 2.8E-138 T 25-04-2016 SMD_RS19955 67e3646d8b383c07bbc8ec0665e6be39 331 PANTHER PTHR13773:SF11 29 324 2.8E-138 T 25-04-2016 SMD_RS10980 4d5afe3332e3339bb220604003a7c709 101 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 6 95 2.3E-17 T 25-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SMD_RS10980 4d5afe3332e3339bb220604003a7c709 101 SUPERFAMILY SSF101498 23 94 2.22E-12 T 25-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SMD_RS10980 4d5afe3332e3339bb220604003a7c709 101 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 94 5.1E-15 T 25-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 SUPERFAMILY SSF56784 5 228 1.25E-43 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 Gene3D G3DSA:3.40.50.1000 5 223 1.4E-35 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 49 198 2.4E-12 T 25-04-2016 IPR023214 HAD-like domain SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 84 193 2.1E-13 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 199 5.9E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 PANTHER PTHR12725:SF65 5 227 2.4E-61 T 25-04-2016 SMD_RS01715 e6d07492ba74382f96191305454b5eb2 239 PANTHER PTHR12725 5 227 2.4E-61 T 25-04-2016 SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 6.1E-44 T 25-04-2016 SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PANTHER PTHR24322:SF356 10 146 2.0E-52 T 25-04-2016 SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PANTHER PTHR24322:SF356 162 193 2.0E-52 T 25-04-2016 SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.4E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.4E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.4E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.4E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.4E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.4E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 199 0.0054 T 25-04-2016 SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.6E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.6E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PANTHER PTHR24322 10 146 2.0E-52 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 PANTHER PTHR24322 162 193 2.0E-52 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 Gene3D G3DSA:3.40.50.720 2 250 1.6E-69 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10465 5ccd87d63526b93592b6dcf986f1b9a8 256 SUPERFAMILY SSF51735 7 251 2.53E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17695 da5db522db9c7e58cc05377a73f8809a 266 PANTHER PTHR11935 1 265 1.9E-113 T 25-04-2016 SMD_RS17695 da5db522db9c7e58cc05377a73f8809a 266 Gene3D G3DSA:3.60.15.10 4 246 4.0E-55 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS17695 da5db522db9c7e58cc05377a73f8809a 266 Pfam PF00753 Metallo-beta-lactamase superfamily 12 203 8.1E-22 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS17695 da5db522db9c7e58cc05377a73f8809a 266 SMART SM00849 14 203 2.8E-31 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS17695 da5db522db9c7e58cc05377a73f8809a 266 SUPERFAMILY SSF56281 12 247 6.3E-54 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS17695 da5db522db9c7e58cc05377a73f8809a 266 PANTHER PTHR11935:SF110 1 265 1.9E-113 T 25-04-2016 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 Gene3D G3DSA:2.170.130.10 43 161 2.8E-33 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 Pfam PF00593 TonB dependent receptor 491 780 3.6E-28 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 SUPERFAMILY SSF56935 29 785 1.71E-104 T 25-04-2016 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 PANTHER PTHR30069 1 702 6.9E-91 T 25-04-2016 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 PANTHER PTHR30069:SF4 1 702 6.9E-91 T 25-04-2016 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 159 8.3E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS20680 67f8092e3982b863375d5d5d479607a5 785 Gene3D G3DSA:2.40.170.20 162 785 1.6E-88 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 Gene3D G3DSA:3.90.230.10 8 258 5.0E-100 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 SUPERFAMILY SSF55920 8 256 2.75E-95 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 PANTHER PTHR10804 4 252 9.0E-150 T 25-04-2016 SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 253 1.4E-98 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 42.569 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 Pfam PF00557 Metallopeptidase family M24 15 245 7.9E-55 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 PANTHER PTHR10804:SF75 4 252 9.0E-150 T 25-04-2016 SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 5.7E-23 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 5.7E-23 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 5.7E-23 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS07055 15664c9ddf3854c42df15bb97644f150 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 5.7E-23 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS15885 a30be8b1f9eff66844f44198ae8c560a 321 PANTHER PTHR23024 69 313 9.8E-35 T 25-04-2016 SMD_RS15885 a30be8b1f9eff66844f44198ae8c560a 321 Gene3D G3DSA:3.40.50.1820 73 312 9.0E-53 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS15885 a30be8b1f9eff66844f44198ae8c560a 321 PANTHER PTHR23024:SF41 69 313 9.8E-35 T 25-04-2016 SMD_RS15885 a30be8b1f9eff66844f44198ae8c560a 321 Pfam PF07859 alpha/beta hydrolase fold 149 290 5.6E-7 T 25-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SMD_RS15885 a30be8b1f9eff66844f44198ae8c560a 321 SUPERFAMILY SSF53474 72 312 2.03E-29 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS03165 df8ebbc6261ed575cce21a2832746c29 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS03165 df8ebbc6261ed575cce21a2832746c29 164 Pfam PF12019 Type II transport protein GspH 60 151 9.6E-9 T 25-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SMD_RS03165 df8ebbc6261ed575cce21a2832746c29 164 SUPERFAMILY SSF54523 23 147 6.59E-8 T 25-04-2016 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 500 8.3E-210 T 25-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 504 45.846 T 25-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 Gene3D G3DSA:1.20.200.10 198 503 2.5E-126 T 25-04-2016 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 25-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 PANTHER PTHR10362:SF7 4 500 1.1E-237 T 25-04-2016 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 SUPERFAMILY SSF48557 2 498 2.12E-190 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 Gene3D G3DSA:1.10.275.10 3 197 1.7E-71 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 Pfam PF00221 Aromatic amino acid lyase 13 470 1.2E-184 T 25-04-2016 IPR001106 Aromatic amino acid lyase SMD_RS14055 66e3952a210957f1b5b1f44c6becc298 513 PANTHER PTHR10362 4 500 1.1E-237 T 25-04-2016 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 PANTHER PTHR10909 106 308 4.2E-114 T 25-04-2016 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 PANTHER PTHR10909:SF294 106 308 4.2E-114 T 25-04-2016 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 SUPERFAMILY SSF52467 190 312 2.32E-47 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 Gene3D G3DSA:3.40.50.1220 188 312 3.4E-58 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 PIRSF PIRSF000089 1 312 1.1E-103 T 25-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 SUPERFAMILY SSF52402 4 179 1.05E-43 T 25-04-2016 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 SMART SM00893 4 185 4.8E-37 T 25-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 Pfam PF01012 Electron transfer flavoprotein domain 5 173 1.3E-31 T 25-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 275 1.1E-35 T 25-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 256 282 - T 25-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site SMD_RS02970 65522e5f0a5501bfaea3bb546fb6ce2e 312 Gene3D G3DSA:3.40.50.620 1 182 2.5E-46 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PANTHER PTHR11777 2 882 0.0 T 25-04-2016 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 Gene3D G3DSA:3.30.930.10 7 253 2.0E-122 T 25-04-2016 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 660 703 1.4E-18 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 SUPERFAMILY SSF50447 459 558 1.55E-16 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 4.7E-32 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 4.7E-32 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 4.7E-32 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 4.7E-32 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 4.7E-32 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 12 861 0.0 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 PANTHER PTHR11777:SF9 2 882 0.0 T 25-04-2016 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 882 198.897 T 25-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 SUPERFAMILY SSF101353 258 448 2.62E-61 T 25-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 SUPERFAMILY SSF55681 7 257 6.21E-107 T 25-04-2016 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 SMART SM00863 660 703 6.5E-23 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 SUPERFAMILY SSF55186 559 718 1.57E-53 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 Pfam PF01411 tRNA synthetases class II (A) 11 563 1.4E-218 T 25-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SMD_RS08890 4258f5de31732d1f4230a367796ff824 882 Pfam PF02272 DHHA1 domain 806 876 2.2E-13 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMD_RS17155 60e4422baebd3415435bccc5620fbd11 398 Gene3D G3DSA:1.10.150.130 76 191 1.4E-8 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS17155 60e4422baebd3415435bccc5620fbd11 398 SUPERFAMILY SSF56349 75 381 1.12E-27 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS17155 60e4422baebd3415435bccc5620fbd11 398 Gene3D G3DSA:1.10.443.10 197 380 1.7E-9 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS11350 468e34f7a1a25d5f72e0a806444f94de 155 PANTHER PTHR26402 5 130 2.5E-31 T 25-04-2016 SMD_RS11350 468e34f7a1a25d5f72e0a806444f94de 155 Gene3D G3DSA:3.40.50.2300 7 132 2.0E-31 T 25-04-2016 SMD_RS11350 468e34f7a1a25d5f72e0a806444f94de 155 SMART SM00448 5 129 1.1E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11350 468e34f7a1a25d5f72e0a806444f94de 155 SUPERFAMILY SSF52172 6 132 5.83E-29 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11350 468e34f7a1a25d5f72e0a806444f94de 155 Pfam PF00072 Response regulator receiver domain 7 129 6.6E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 Pfam PF00570 HRDC domain 213 264 8.1E-5 T 25-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 TIGRFAM TIGR01388 rnd: ribonuclease D 4 356 2.2E-114 T 25-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 PANTHER PTHR12124 16 334 9.9E-60 T 25-04-2016 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 PANTHER PTHR12124:SF42 16 334 9.9E-60 T 25-04-2016 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 SUPERFAMILY SSF47819 289 356 2.22E-11 T 25-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 Gene3D G3DSA:3.30.420.10 16 178 7.0E-14 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 SUPERFAMILY SSF53098 3 191 3.29E-54 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 Pfam PF01612 3'-5' exonuclease 4 167 3.2E-29 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 SUPERFAMILY SSF47819 191 282 2.3E-14 T 25-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SMD_RS15120 471a1c1ab3b344689646962ea747fef0 359 SMART SM00474 2 168 3.4E-29 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 Gene3D G3DSA:3.10.450.70 45 106 6.1E-20 T 25-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 PANTHER PTHR35272:SF3 30 256 1.1E-77 T 25-04-2016 SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 PANTHER PTHR35272 30 256 1.1E-77 T 25-04-2016 SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 SUPERFAMILY SSF52833 117 256 3.06E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 SUPERFAMILY SSF54423 45 103 2.55E-10 T 25-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 Gene3D G3DSA:3.40.30.10 127 259 1.3E-43 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 Pfam PF13098 Thioredoxin-like domain 130 254 1.7E-26 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03125 0aaaeca091207dfe3eb01551468d4554 261 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 101 1.2E-16 T 25-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 SUPERFAMILY SSF46767 195 277 2.88E-31 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Gene3D G3DSA:1.10.10.60 72 106 8.8E-4 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Pfam PF12833 Helix-turn-helix domain 32 109 2.3E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 196 275 1.8E-34 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 119 177 9.7E-5 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 SUPERFAMILY SSF53155 116 194 7.46E-19 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 PANTHER PTHR10815:SF9 84 277 1.7E-101 T 25-04-2016 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Gene3D G3DSA:1.10.10.60 10 65 1.0E-19 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 PANTHER PTHR10815 84 277 1.7E-101 T 25-04-2016 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 246 252 - T 25-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 SMART SM00342 26 108 1.1E-16 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 SUPERFAMILY SSF46689 10 58 8.06E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 197 277 4.4E-34 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Gene3D G3DSA:1.10.10.10 195 278 7.7E-35 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS15145 1fc7d460de1ac591ab3c7d979e753f7f 280 Gene3D G3DSA:3.30.160.70 107 194 2.7E-31 T 25-04-2016 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 4.4E-19 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 Pfam PF00375 Sodium:dicarboxylate symporter family 12 415 1.1E-114 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 SUPERFAMILY SSF118215 12 415 3.53E-102 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PANTHER PTHR11958:SF59 2 437 7.2E-223 T 25-04-2016 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 Gene3D G3DSA:1.10.3860.10 4 419 1.9E-108 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS15800 8b03ea962fa6b9b599eba3058203dfbc 444 PANTHER PTHR11958 2 437 7.2E-223 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 Gene3D G3DSA:3.90.79.10 6 152 5.7E-33 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PANTHER PTHR22769:SF39 1 153 2.9E-58 T 25-04-2016 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 SUPERFAMILY SSF55811 3 150 5.28E-26 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PRINTS PR01402 Mutator MutX protein signature 9 27 5.2E-10 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PRINTS PR01402 Mutator MutX protein signature 105 125 5.2E-10 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PRINTS PR01402 Mutator MutX protein signature 125 142 5.2E-10 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PRINTS PR01402 Mutator MutX protein signature 74 100 5.2E-10 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PRINTS PR01402 Mutator MutX protein signature 27 42 5.2E-10 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 Pfam PF00293 NUDIX domain 12 134 5.7E-16 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS13650 aa90896accea35c45a58a0f766f673e7 162 PANTHER PTHR22769 1 153 2.9E-58 T 25-04-2016 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 Gene3D G3DSA:3.40.50.360 73 216 2.3E-37 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 Gene3D G3DSA:3.40.50.80 398 532 3.2E-34 T 25-04-2016 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 Pfam PF00258 Flavodoxin 83 209 1.1E-22 T 25-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 Gene3D G3DSA:2.40.30.10 254 285 6.1E-9 T 25-04-2016 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 Gene3D G3DSA:2.40.30.10 325 383 6.1E-9 T 25-04-2016 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PANTHER PTHR19384 60 534 1.7E-79 T 25-04-2016 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00369 Flavodoxin signature 81 94 2.0E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00369 Flavodoxin signature 129 140 2.0E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00369 Flavodoxin signature 184 203 2.0E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00369 Flavodoxin signature 160 170 2.0E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 Pfam PF00175 Oxidoreductase NAD-binding domain 403 507 2.4E-9 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 SUPERFAMILY SSF63380 227 393 1.21E-20 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 SUPERFAMILY SSF52343 397 534 2.75E-31 T 25-04-2016 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 439 450 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 426 435 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 470 486 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 493 501 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 402 421 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 366 375 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 338 345 1.1E-9 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS05580 0a1e8fa59f526c8eeaf99fd5fe77491e 534 SUPERFAMILY SSF52218 77 218 1.79E-40 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 95 330 5.3E-44 T 25-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 Gene3D G3DSA:3.40.50.300 116 270 3.1E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 PANTHER PTHR32120:SF8 1 369 6.1E-151 T 25-04-2016 SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 SUPERFAMILY SSF52540 115 332 3.49E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 Pfam PF03193 Protein of unknown function, DUF258 98 271 4.9E-45 T 25-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 PANTHER PTHR32120 1 369 6.1E-151 T 25-04-2016 SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 Gene3D G3DSA:1.10.40.50 281 338 1.5E-21 T 25-04-2016 SMD_RS18425 c02d8ea2c869722aae24631eb9c96e4f 369 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 336 31.116 T 25-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Gene3D G3DSA:3.30.1490.20 122 190 2.2E-31 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 PANTHER PTHR10520 1 426 1.1E-274 T 25-04-2016 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.3E-25 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Gene3D G3DSA:3.90.600.10 331 423 6.2E-31 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.732 T 25-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 SUPERFAMILY SSF52440 1 103 2.01E-36 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.5E-80 T 25-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Gene3D G3DSA:3.30.470.20 191 328 5.4E-63 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 SMART SM01210 330 423 2.8E-47 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Gene3D G3DSA:3.40.50.20 2 95 1.2E-38 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 SMART SM01209 103 296 2.1E-138 T 25-04-2016 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 25-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 SUPERFAMILY SSF51246 330 424 1.18E-27 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.7E-35 T 25-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 SUPERFAMILY SSF56059 104 324 7.78E-66 T 25-04-2016 SMD_RS19990 60dcd87f8b9effc3dad3bd4eca593bda 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 3.4E-173 T 25-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82866 811 1034 5.75E-40 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 627 641 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 558 575 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.8E-111 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82714 182 272 3.14E-22 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82693 135 182 1.62E-27 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82693 274 330 1.62E-27 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82866 296 497 6.54E-47 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1039 0.0 T 25-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PANTHER PTHR32063:SF13 1 1038 0.0 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 Gene3D G3DSA:1.10.3850.10 819 1032 1.5E-50 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 Gene3D G3DSA:1.10.3850.10 279 498 1.3E-55 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 Gene3D G3DSA:3.30.2090.10 726 813 1.4E-23 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18935 db4636d5051255218bddee050c794339 1040 Gene3D G3DSA:3.30.70.1430 573 675 3.5E-35 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82714 727 814 2.62E-20 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82693 38 133 2.41E-27 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 PANTHER PTHR32063 1 1038 0.0 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18935 db4636d5051255218bddee050c794339 1040 Gene3D G3DSA:3.30.70.1430 38 137 5.5E-35 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 SUPERFAMILY SSF82693 571 675 8.37E-30 T 25-04-2016 SMD_RS18935 db4636d5051255218bddee050c794339 1040 Gene3D G3DSA:3.30.2090.10 181 275 5.0E-27 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 340 3.7E-138 T 25-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 340 8.7E-115 T 25-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 Gene3D G3DSA:1.20.120.420 15 162 1.3E-51 T 25-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 SUPERFAMILY SSF100950 12 343 7.79E-115 T 25-04-2016 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 PANTHER PTHR10233 15 340 1.7E-157 T 25-04-2016 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 PANTHER PTHR10233:SF6 15 340 1.7E-157 T 25-04-2016 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 Gene3D G3DSA:3.40.50.10470 163 342 6.5E-68 T 25-04-2016 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.923 T 25-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMD_RS14195 5a4620be289a401529cd8278b20910ae 354 Pfam PF01008 Initiation factor 2 subunit family 57 340 2.9E-79 T 25-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMD_RS07775 5944f50208d49ca24c3d9a7eec22568d 128 Gene3D G3DSA:2.60.40.1220 25 128 4.3E-29 T 25-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like SMD_RS07775 5944f50208d49ca24c3d9a7eec22568d 128 SUPERFAMILY SSF81296 25 128 4.27E-29 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS07775 5944f50208d49ca24c3d9a7eec22568d 128 Pfam PF04234 CopC domain 26 127 6.2E-23 T 25-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 Pfam PF02601 Exonuclease VII, large subunit 125 440 3.3E-91 T 25-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 443 29.791 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 PANTHER PTHR30008:SF0 1 443 2.0E-163 T 25-04-2016 SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 Gene3D G3DSA:2.40.50.140 46 106 3.2E-4 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 357 6.5E-126 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 PANTHER PTHR30008 1 443 2.0E-163 T 25-04-2016 SMD_RS15105 1763a540d4353600cc119d930e2aac79 443 Pfam PF13742 OB-fold nucleic acid binding domain 12 102 1.2E-26 T 25-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 PANTHER PTHR32552:SF14 80 731 1.9E-169 T 25-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 Pfam PF00593 TonB dependent receptor 496 729 4.9E-20 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 PANTHER PTHR32552 80 731 1.9E-169 T 25-04-2016 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 Gene3D G3DSA:2.40.170.20 206 731 2.8E-102 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 Gene3D G3DSA:2.170.130.10 46 201 2.0E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 714 731 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 90 731 8.8E-113 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 SUPERFAMILY SSF56935 45 731 1.39E-95 T 25-04-2016 SMD_RS12180 94207b22ba164b3497af7162f7ead9a9 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 89 182 3.2E-13 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 1.7E-96 T 25-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 Gene3D G3DSA:3.30.1300.10 178 278 5.5E-26 T 25-04-2016 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 Hamap MF_00158 Pantothenate synthetase [panC]. 3 279 38.222 T 25-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 PANTHER PTHR21299:SF1 1 278 8.9E-123 T 25-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 Gene3D G3DSA:3.40.50.620 2 176 4.1E-73 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 277 7.3E-89 T 25-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 PANTHER PTHR21299 1 278 8.9E-123 T 25-04-2016 SMD_RS09075 26f4436e1bca522e413feffec7728c4c 279 SUPERFAMILY SSF52374 3 278 1.07E-100 T 25-04-2016 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PANTHER PTHR22931 42 567 1.3E-150 T 25-04-2016 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 SUPERFAMILY SSF52009 143 261 5.62E-26 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PANTHER PTHR22931:SF28 42 567 1.3E-150 T 25-04-2016 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 Gene3D G3DSA:1.10.274.10 41 148 2.9E-27 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 Pfam PF05524 PEP-utilising enzyme, N-terminal 21 143 7.1E-24 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 SUPERFAMILY SSF51621 264 559 9.68E-97 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 464 482 - T 25-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PIRSF PIRSF000732 15 589 1.7E-192 T 25-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 267 558 1.9E-96 T 25-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 19 579 1.3E-146 T 25-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 SUPERFAMILY SSF47831 41 158 3.4E-26 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 Gene3D G3DSA:3.50.30.10 149 271 1.2E-32 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 Gene3D G3DSA:3.20.20.60 272 582 1.3E-99 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 Pfam PF00391 PEP-utilising enzyme, mobile domain 170 241 5.6E-19 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 309 328 2.3E-26 T 25-04-2016 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 517 529 2.3E-26 T 25-04-2016 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 481 496 2.3E-26 T 25-04-2016 SMD_RS05410 7c2a27c952b39febfbd68d6f6f02d3b0 589 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.3E-26 T 25-04-2016 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 PIRSF PIRSF000977 1 479 7.0E-182 T 25-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 Gene3D G3DSA:3.30.420.10 3 194 1.7E-73 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 SUPERFAMILY SSF53098 4 475 1.03E-117 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 PANTHER PTHR11046:SF2 4 475 2.3E-219 T 25-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 Pfam PF08411 Exonuclease C-terminal 206 473 1.7E-91 T 25-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 Pfam PF00929 Exonuclease 7 185 2.9E-22 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 PANTHER PTHR11046 4 475 2.3E-219 T 25-04-2016 SMD_RS14300 c78cfe2220fa5ccda249cb5cc5fe0653 479 SMART SM00479 4 197 7.6E-5 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 168 3.3E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069 314 481 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069 497 691 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069 11 291 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069 711 831 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Gene3D G3DSA:2.40.170.20 169 243 4.9E-80 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Gene3D G3DSA:2.40.170.20 699 979 4.9E-80 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Gene3D G3DSA:2.40.170.20 310 350 4.9E-80 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Gene3D G3DSA:2.40.170.20 479 648 4.9E-80 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Gene3D G3DSA:2.40.170.20 393 435 4.9E-80 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Pfam PF00593 TonB dependent receptor 615 976 7.3E-30 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069:SF7 314 481 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069:SF7 497 691 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069:SF7 11 291 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 PANTHER PTHR30069:SF7 711 831 7.2E-118 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 Gene3D G3DSA:2.170.130.10 43 168 3.3E-33 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 SUPERFAMILY SSF56935 701 979 1.36E-91 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 SUPERFAMILY SSF56935 508 657 1.36E-91 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 SUPERFAMILY SSF56935 41 233 1.36E-91 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 SUPERFAMILY SSF56935 311 359 1.36E-91 T 25-04-2016 SMD_RS04485 cd3aba19572f7e672b1090498ae4ca1d 979 SUPERFAMILY SSF56935 391 455 1.36E-91 T 25-04-2016 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 5.0E-12 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 5.0E-12 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 5.0E-12 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 5.0E-12 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 5.0E-12 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 289 38.457 T 25-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 259 1.0E-99 T 25-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 111 3.7E-23 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 127 231 7.9E-18 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 SUPERFAMILY SSF52374 7 253 3.75E-80 T 25-04-2016 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 Gene3D G3DSA:3.40.50.620 8 71 5.9E-40 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 Gene3D G3DSA:3.40.50.620 171 220 5.9E-40 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PANTHER PTHR11451 8 222 4.5E-89 T 25-04-2016 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 Gene3D G3DSA:3.90.800.10 72 169 5.0E-15 T 25-04-2016 SMD_RS15055 fae1deca8cbf1a591da514cd52faa117 306 PANTHER PTHR11451:SF35 8 222 4.5E-89 T 25-04-2016 SMD_RS18855 8d41e9bafa3817a3f202d9d0956d216b 367 PANTHER PTHR30474:SF1 1 362 5.8E-131 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SMD_RS18855 8d41e9bafa3817a3f202d9d0956d216b 367 Pfam PF01098 Cell cycle protein 49 361 4.5E-91 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMD_RS18855 8d41e9bafa3817a3f202d9d0956d216b 367 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 320 344 - T 25-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SMD_RS18855 8d41e9bafa3817a3f202d9d0956d216b 367 PANTHER PTHR30474 1 362 5.8E-131 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMD_RS18855 8d41e9bafa3817a3f202d9d0956d216b 367 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 21 362 5.6E-111 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PANTHER PTHR10438 161 179 2.8E-50 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PANTHER PTHR10438 4 114 2.8E-50 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 Pfam PF00085 Thioredoxin 9 111 1.4E-28 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 111 1.8E-31 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PANTHER PTHR10438:SF281 161 179 2.8E-50 T 25-04-2016 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PANTHER PTHR10438:SF281 4 114 2.8E-50 T 25-04-2016 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PRINTS PR00421 Thioredoxin family signature 76 87 2.1E-6 T 25-04-2016 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PRINTS PR00421 Thioredoxin family signature 36 45 2.1E-6 T 25-04-2016 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 PRINTS PR00421 Thioredoxin family signature 28 36 2.1E-6 T 25-04-2016 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 Gene3D G3DSA:1.25.40.10 200 285 2.2E-21 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 Gene3D G3DSA:1.25.40.10 135 197 9.9E-4 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 SUPERFAMILY SSF52833 7 111 1.87E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 Gene3D G3DSA:3.40.30.10 6 111 8.5E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15930 e9a32415367dd9d7f213cb9267acebd9 285 Pfam PF14561 Tetratricopeptide repeat 199 285 3.8E-19 T 25-04-2016 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 SUPERFAMILY SSF51064 117 170 6.93E-18 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 PANTHER PTHR21237 25 171 5.8E-54 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 PRINTS PR00773 GrpE protein signature 122 137 3.4E-24 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 PRINTS PR00773 GrpE protein signature 149 168 3.4E-24 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 PRINTS PR00773 GrpE protein signature 42 58 3.4E-24 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 PRINTS PR00773 GrpE protein signature 70 85 3.4E-24 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 Gene3D G3DSA:3.90.20.20 20 109 7.9E-25 T 25-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 Pfam PF01025 GrpE 11 169 1.4E-47 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 Hamap MF_01151 Protein GrpE [grpE]. 2 170 19.455 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 SUPERFAMILY SSF58014 23 114 4.84E-23 T 25-04-2016 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 Gene3D G3DSA:2.30.22.10 114 170 1.2E-23 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMD_RS09480 c69b48f5f0bfcf67177c473f8bfe3057 171 ProSitePatterns PS01071 grpE protein signature. 125 168 - T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PANTHER PTHR11757 23 703 0.0 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PANTHER PTHR11757:SF3 23 703 0.0 T 25-04-2016 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 SUPERFAMILY SSF53474 436 696 2.59E-42 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS18990 54c08712b89582297c0d27690971fb55 703 Gene3D G3DSA:2.130.10.120 96 428 3.4E-100 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 Gene3D G3DSA:3.40.50.1820 439 694 2.7E-34 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS18990 54c08712b89582297c0d27690971fb55 703 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 425 4.3E-113 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 494 518 4.1E-47 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 552 572 4.1E-47 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 628 650 4.1E-47 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 468 486 4.1E-47 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 522 541 4.1E-47 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 625 4.1E-47 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 SUPERFAMILY SSF50993 22 430 1.33E-83 T 25-04-2016 SMD_RS18990 54c08712b89582297c0d27690971fb55 703 Pfam PF00326 Prolyl oligopeptidase family 483 700 4.3E-66 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 313 1.9E-35 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 SUPERFAMILY SSF55681 5 313 1.12E-68 T 25-04-2016 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 Gene3D G3DSA:3.30.930.10 5 313 4.6E-58 T 25-04-2016 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 PRINTS PR00982 Lysyl-tRNA synthetase signature 24 34 2.2E-6 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 PRINTS PR00982 Lysyl-tRNA synthetase signature 202 218 2.2E-6 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 PRINTS PR00982 Lysyl-tRNA synthetase signature 92 109 2.2E-6 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 9 312 1.4E-111 T 25-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 PANTHER PTHR22594 1 313 2.2E-102 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14205 7628f13fae88be20fd5ac07b23b87dea 318 PANTHER PTHR22594:SF7 1 313 2.2E-102 T 25-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 SMD_RS00565 1277fa89bfd8a86d3a81fbd5176df422 444 SUPERFAMILY SSF111283 7 438 1.83E-90 T 25-04-2016 SMD_RS00565 1277fa89bfd8a86d3a81fbd5176df422 444 Pfam PF01523 Putative modulator of DNA gyrase 26 310 9.3E-47 T 25-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS00565 1277fa89bfd8a86d3a81fbd5176df422 444 PANTHER PTHR30624 1 442 6.3E-110 T 25-04-2016 SMD_RS00565 1277fa89bfd8a86d3a81fbd5176df422 444 PANTHER PTHR30624:SF8 1 442 6.3E-110 T 25-04-2016 SMD_RS18460 c5032527598915d03af7b23491bcce57 258 TIGRFAM TIGR01721 AMN-like: putative AMP nucleosidase 2 256 3.5E-99 T 25-04-2016 IPR010944 AMP nucleosidase, putative SMD_RS18460 c5032527598915d03af7b23491bcce57 258 Gene3D G3DSA:3.40.50.1580 3 247 1.9E-65 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMD_RS18460 c5032527598915d03af7b23491bcce57 258 Pfam PF01048 Phosphorylase superfamily 62 224 1.7E-24 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMD_RS18460 c5032527598915d03af7b23491bcce57 258 SUPERFAMILY SSF53167 4 253 9.95E-63 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMD_RS18460 c5032527598915d03af7b23491bcce57 258 PANTHER PTHR21234:SF11 6 247 1.2E-61 T 25-04-2016 SMD_RS18460 c5032527598915d03af7b23491bcce57 258 PANTHER PTHR21234 6 247 1.2E-61 T 25-04-2016 IPR018017 Nucleoside phosphorylase SMD_RS02085 4b04b6753eb4fa605d71d59391f573b5 166 Pfam PF04273 Putative phosphatase (DUF442) 28 129 1.1E-13 T 25-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SMD_RS02085 4b04b6753eb4fa605d71d59391f573b5 166 Gene3D G3DSA:3.90.190.10 24 150 6.9E-34 T 25-04-2016 IPR029021 Protein-tyrosine phosphatase-like SMD_RS02085 4b04b6753eb4fa605d71d59391f573b5 166 SUPERFAMILY SSF52799 26 144 1.34E-18 T 25-04-2016 IPR029021 Protein-tyrosine phosphatase-like SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 Pfam PF01371 Trp repressor protein 21 105 1.6E-26 T 25-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 PANTHER PTHR40080 11 108 7.6E-33 T 25-04-2016 SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 PANTHER PTHR40080:SF1 11 108 7.6E-33 T 25-04-2016 SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 21 105 2.2E-16 T 25-04-2016 IPR013368 TrpR homologue YerC/YecD SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 Gene3D G3DSA:1.10.1270.10 16 107 1.3E-34 T 25-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 PIRSF PIRSF012508 10 108 3.0E-29 T 25-04-2016 IPR013368 TrpR homologue YerC/YecD SMD_RS10255 59873cac3d208fba50e912a647e8574c 108 SUPERFAMILY SSF48295 13 105 1.15E-23 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 SUPERFAMILY SSF46785 5 111 9.87E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 Gene3D G3DSA:3.40.190.10 177 251 7.9E-12 T 25-04-2016 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 PANTHER PTHR30537:SF8 1 291 3.7E-105 T 25-04-2016 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 Gene3D G3DSA:1.10.10.10 1 84 1.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 PANTHER PTHR30537 1 291 3.7E-105 T 25-04-2016 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 Gene3D G3DSA:3.40.190.10 92 176 7.3E-29 T 25-04-2016 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 SUPERFAMILY SSF53850 91 292 2.9E-35 T 25-04-2016 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 7.1E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS19870 48c078a1f6570e31fe24967822e966dc 299 Pfam PF03466 LysR substrate binding domain 88 287 1.1E-29 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS18355 b54f6dcae4ec039b6c1999dd5f6fe315 247 PANTHER PTHR33321 88 243 9.0E-15 T 25-04-2016 SMD_RS18355 b54f6dcae4ec039b6c1999dd5f6fe315 247 Pfam PF04450 Peptidase of plants and bacteria 54 228 1.0E-16 T 25-04-2016 IPR007541 Uncharacterised protein family, basic secretory protein SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 PANTHER PTHR26402 4 234 1.0E-92 T 25-04-2016 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 SUPERFAMILY SSF46894 131 232 4.95E-31 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 3.7E-26 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 Pfam PF00072 Response regulator receiver domain 6 117 6.7E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 Gene3D G3DSA:3.40.50.2300 2 126 7.0E-41 T 25-04-2016 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 SMART SM00448 4 116 1.1E-40 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 SMART SM00862 155 231 2.6E-29 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 PANTHER PTHR26402:SF50 4 234 1.0E-92 T 25-04-2016 SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 SUPERFAMILY SSF52172 2 129 2.56E-40 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS02795 79f95a0bf669fba105d6cfdbc0ac5d73 239 Gene3D G3DSA:1.10.10.10 136 233 8.8E-36 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 PANTHER PTHR11624 23 219 5.9E-286 T 25-04-2016 IPR033247 Transketolase family SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 PANTHER PTHR11624 243 633 5.9E-286 T 25-04-2016 IPR033247 Transketolase family SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 619 1.1E-257 T 25-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 PANTHER PTHR11624:SF20 23 219 5.9E-286 T 25-04-2016 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 PANTHER PTHR11624:SF20 243 633 5.9E-286 T 25-04-2016 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 SMART SM00861 321 485 9.3E-62 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 2.0E-36 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Gene3D G3DSA:3.40.50.970 336 497 3.6E-35 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Gene3D G3DSA:3.40.50.970 25 202 3.8E-73 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Gene3D G3DSA:3.40.50.970 244 335 3.8E-73 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Pfam PF02780 Transketolase, C-terminal domain 497 613 1.1E-22 T 25-04-2016 IPR033248 Transketolase, C-terminal domain SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 SUPERFAMILY SSF52518 7 351 3.29E-73 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 SUPERFAMILY SSF52518 297 480 1.28E-57 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 SUPERFAMILY SSF52922 493 619 9.16E-28 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 622 44.887 T 25-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 284 2.8E-115 T 25-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 Gene3D G3DSA:3.40.50.920 498 619 3.9E-29 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS15185 5c047ff8b8a36b7401c36cbe0fb5d6e7 635 ProSitePatterns PS00802 Transketolase signature 2. 427 443 - T 25-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS12725 fbc2e178d939486d31a3014fc7ed0728 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 213 6.8E-75 T 25-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SMD_RS12725 fbc2e178d939486d31a3014fc7ed0728 227 PANTHER PTHR30183 5 226 5.3E-80 T 25-04-2016 SMD_RS12725 fbc2e178d939486d31a3014fc7ed0728 227 Gene3D G3DSA:1.10.3720.10 5 221 1.3E-49 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS12725 fbc2e178d939486d31a3014fc7ed0728 227 SUPERFAMILY SSF161098 5 215 1.26E-54 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS12725 fbc2e178d939486d31a3014fc7ed0728 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 215 1.3E-24 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS06565 dd175baffcfc1da12b4875cd61c99b76 294 Pfam PF00491 Arginase family 43 239 2.6E-5 T 25-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SMD_RS06565 dd175baffcfc1da12b4875cd61c99b76 294 SUPERFAMILY SSF52768 42 239 2.7E-10 T 25-04-2016 SMD_RS06565 dd175baffcfc1da12b4875cd61c99b76 294 Gene3D G3DSA:3.40.800.10 55 239 3.1E-9 T 25-04-2016 IPR023696 Ureohydrolase domain SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 PANTHER PTHR22777:SF14 1 509 5.7E-201 T 25-04-2016 SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 Pfam PF03741 Integral membrane protein TerC family 15 203 2.9E-48 T 25-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 SUPERFAMILY SSF54631 285 419 1.34E-21 T 25-04-2016 SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 PANTHER PTHR22777 1 509 5.7E-201 T 25-04-2016 SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 SUPERFAMILY SSF56176 430 511 2.26E-20 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 Gene3D G3DSA:3.30.465.10 412 509 1.9E-27 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 Pfam PF00571 CBS domain 368 417 1.1E-4 T 25-04-2016 IPR000644 CBS domain SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 SMART SM01091 431 510 7.5E-26 T 25-04-2016 IPR005170 Transporter-associated domain SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 Pfam PF03471 Transporter associated domain 433 509 1.3E-22 T 25-04-2016 IPR005170 Transporter-associated domain SMD_RS05930 54b9f80449240e17d848f901f9e8664a 513 Gene3D G3DSA:3.10.580.10 284 411 1.5E-12 T 25-04-2016 SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 SUPERFAMILY SSF55282 4 180 1.46E-77 T 25-04-2016 IPR022803 Ribosomal protein L5 domain SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 Gene3D G3DSA:3.30.1440.10 3 180 6.9E-79 T 25-04-2016 IPR022803 Ribosomal protein L5 domain SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 PANTHER PTHR11994 1 179 3.7E-98 T 25-04-2016 SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 25-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.293 T 25-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 8.1E-40 T 25-04-2016 IPR031309 Ribosomal protein L5, C-terminal SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 PIRSF PIRSF002161 1 180 1.3E-65 T 25-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SMD_RS04230 95cde0388cbecd1a0a55674ca20cbf5a 180 Pfam PF00281 Ribosomal protein L5 25 81 2.3E-27 T 25-04-2016 IPR031310 Ribosomal protein L5, N-terminal SMD_RS08290 3c969e2699e81e1df11bd8bdcd1a95d2 304 SUPERFAMILY SSF111369 59 220 6.41E-13 T 25-04-2016 SMD_RS08290 3c969e2699e81e1df11bd8bdcd1a95d2 304 PANTHER PTHR30469 58 262 5.0E-20 T 25-04-2016 SMD_RS08290 3c969e2699e81e1df11bd8bdcd1a95d2 304 Pfam PF13533 Biotin-lipoyl like 59 105 3.6E-11 T 25-04-2016 SMD_RS08290 3c969e2699e81e1df11bd8bdcd1a95d2 304 Gene3D G3DSA:2.40.50.100 60 90 6.6E-11 T 25-04-2016 SMD_RS08290 3c969e2699e81e1df11bd8bdcd1a95d2 304 Gene3D G3DSA:2.40.50.100 179 212 6.6E-11 T 25-04-2016 SMD_RS08290 3c969e2699e81e1df11bd8bdcd1a95d2 304 Pfam PF13437 HlyD family secretion protein 182 265 9.6E-8 T 25-04-2016 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 SMART SM00533 285 592 3.1E-93 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Gene3D G3DSA:3.30.420.110 129 257 1.5E-40 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Pfam PF05188 MutS domain II 131 254 9.1E-28 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Pfam PF05192 MutS domain III 271 560 1.6E-37 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Gene3D G3DSA:3.40.1170.10 3 122 4.1E-49 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 SUPERFAMILY SSF53150 116 268 7.46E-41 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Pfam PF01624 MutS domain I 10 121 5.9E-41 T 25-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 9 855 24.858 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Pfam PF00488 MutS domain V 611 803 1.8E-81 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 SUPERFAMILY SSF55271 5 117 1.06E-41 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 SMART SM00534 608 800 3.4E-110 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 SUPERFAMILY SSF48334 269 566 9.02E-85 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 PANTHER PTHR11361:SF86 1 805 0.0 T 25-04-2016 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 PANTHER PTHR11361 1 805 0.0 T 25-04-2016 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Pfam PF05190 MutS family domain IV 429 519 3.8E-29 T 25-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 860 0.0 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 SUPERFAMILY SSF52540 568 804 1.01E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Gene3D G3DSA:1.10.1420.10 319 478 1.2E-50 T 25-04-2016 SMD_RS06480 957546e778ed44d77d8a637b835aa125 863 Gene3D G3DSA:3.40.50.300 569 804 5.7E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21305 5d5f62010e805baa22c35c1a284f0a9b 85 SUPERFAMILY SSF47336 1 83 2.49E-18 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS21305 5d5f62010e805baa22c35c1a284f0a9b 85 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 14.595 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMD_RS21305 5d5f62010e805baa22c35c1a284f0a9b 85 Gene3D G3DSA:1.10.1200.10 1 78 3.1E-18 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS21305 5d5f62010e805baa22c35c1a284f0a9b 85 Pfam PF00550 Phosphopantetheine attachment site 8 74 2.1E-9 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 SUPERFAMILY SSF50814 11 173 2.2E-38 T 25-04-2016 IPR011038 Calycin-like SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 Pfam PF08212 Lipocalin-like domain 30 174 9.6E-49 T 25-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 Gene3D G3DSA:2.40.128.20 8 171 9.0E-46 T 25-04-2016 IPR012674 Calycin SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 PRINTS PR01171 Bacterial lipocalin signature 138 149 1.5E-5 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 PRINTS PR01171 Bacterial lipocalin signature 123 131 1.5E-5 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 PRINTS PR01171 Bacterial lipocalin signature 30 44 1.5E-5 T 25-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 ProSitePatterns PS00213 Lipocalin signature. 31 42 - T 25-04-2016 IPR022272 Lipocalin family conserved site SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 PIRSF PIRSF036893 2 182 1.3E-54 T 25-04-2016 IPR022271 Lipocalin, ApoD type SMD_RS15165 b81ddd3e091114c64b10aba7d7dd2d2a 183 PANTHER PTHR10612 19 174 2.4E-38 T 25-04-2016 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 Pfam PF00171 Aldehyde dehydrogenase family 18 479 1.1E-176 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 SUPERFAMILY SSF53720 4 483 3.01E-172 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 PANTHER PTHR11699:SF115 1 490 0.0 T 25-04-2016 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.6E-223 T 25-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 PANTHER PTHR11699 1 490 0.0 T 25-04-2016 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 Gene3D G3DSA:3.40.605.10 7 265 5.1E-103 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 Gene3D G3DSA:3.40.309.10 266 444 1.4E-67 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS10620 375ff6667afa7e4f0ba93ead04dae87a 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 58.027 T 25-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 Pfam PF06969 HemN C-terminal domain 375 442 3.0E-9 T 25-04-2016 IPR010723 HemN, C-terminal SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 PANTHER PTHR13932 6 463 4.9E-209 T 25-04-2016 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 Pfam PF04055 Radical SAM superfamily 66 239 1.1E-17 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 PANTHER PTHR13932:SF6 6 463 4.9E-209 T 25-04-2016 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 Gene3D G3DSA:3.80.30.20 62 269 2.0E-26 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 SUPERFAMILY SSF102114 13 456 1.1E-130 T 25-04-2016 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 SMART SM00729 61 284 2.4E-48 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 PIRSF PIRSF000167 14 467 1.6E-157 T 25-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SMD_RS08645 1c589bfa70b7139d084b277e49fc4aac 469 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 469 3.3E-160 T 25-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 PANTHER PTHR11964 1 369 1.2E-255 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 PANTHER PTHR11964 385 395 1.2E-255 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 SUPERFAMILY SSF55973 3 109 3.69E-45 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Gene3D G3DSA:3.30.300.10 134 235 9.3E-38 T 25-04-2016 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 8.1E-43 T 25-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 SUPERFAMILY SSF55973 110 233 3.65E-46 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 55.164 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 PIRSF PIRSF000497 1 401 1.8E-168 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 9.4E-42 T 25-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 370 9.6E-180 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Gene3D G3DSA:3.30.300.10 246 400 7.8E-71 T 25-04-2016 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Gene3D G3DSA:3.30.300.10 11 133 1.1E-47 T 25-04-2016 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 SUPERFAMILY SSF55973 235 397 1.1E-67 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS03590 66139641b08d1bbdb0f63605c60ee433 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 369 6.3E-69 T 25-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 Pfam PF01106 NifU-like domain 115 179 4.9E-20 T 25-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 PANTHER PTHR10072 1 99 5.0E-69 T 25-04-2016 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 PANTHER PTHR10072 149 190 5.0E-69 T 25-04-2016 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 SUPERFAMILY SSF89360 1 88 1.59E-13 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 Gene3D G3DSA:2.60.300.12 1 99 2.2E-8 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 PANTHER PTHR10072:SF37 1 99 5.0E-69 T 25-04-2016 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 PANTHER PTHR10072:SF37 149 190 5.0E-69 T 25-04-2016 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 5.0E-26 T 25-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 38.198 T 25-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 SMD_RS14680 5ecc0e85248f56831eec3862cc62326e 199 SUPERFAMILY SSF117916 105 186 2.4E-22 T 25-04-2016 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 Gene3D G3DSA:2.60.120.260 474 588 1.4E-18 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 125 135 - T 25-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 SUPERFAMILY SSF49785 461 587 5.95E-17 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PANTHER PTHR10795:SF416 360 575 4.9E-55 T 25-04-2016 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PANTHER PTHR10795:SF416 253 332 4.9E-55 T 25-04-2016 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PANTHER PTHR10795:SF416 36 234 4.9E-55 T 25-04-2016 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 SUPERFAMILY SSF52743 36 326 1.83E-65 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 SUPERFAMILY SSF52743 353 448 1.83E-65 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 Gene3D G3DSA:3.40.50.200 31 450 1.2E-73 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 Pfam PF01483 Proprotein convertase P-domain 490 583 5.4E-14 T 25-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PRINTS PR00723 Subtilisin serine protease family (S8) signature 77 96 3.9E-17 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PRINTS PR00723 Subtilisin serine protease family (S8) signature 361 377 3.9E-17 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PRINTS PR00723 Subtilisin serine protease family (S8) signature 121 134 3.9E-17 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 82 93 - T 25-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 362 372 - T 25-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 Pfam PF00082 Subtilase family 77 422 4.7E-36 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PANTHER PTHR10795 360 575 4.9E-55 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PANTHER PTHR10795 253 332 4.9E-55 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS20620 2a437c7dd03608b6450b8d1efc64c95c 588 PANTHER PTHR10795 36 234 4.9E-55 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 25-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 PANTHER PTHR11918 5 442 5.7E-226 T 25-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 437 9.7E-175 T 25-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 Gene3D G3DSA:3.80.30.20 135 373 3.4E-74 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 437 5.4E-106 T 25-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 Pfam PF00919 Uncharacterized protein family UPF0004 7 98 9.2E-21 T 25-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 Gene3D G3DSA:2.40.50.140 377 440 6.4E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 439 61.183 T 25-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 PANTHER PTHR11918:SF57 5 442 5.7E-226 T 25-04-2016 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 SUPERFAMILY SSF102114 117 368 4.45E-53 T 25-04-2016 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 Pfam PF04055 Radical SAM superfamily 143 320 5.0E-31 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS15650 cc56e42b965ff7e52343ea152daaaee2 453 SMART SM00729 137 362 2.0E-53 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-18 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-18 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-18 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 PANTHER PTHR33175:SF5 1 93 1.1E-47 T 25-04-2016 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 9.2E-42 T 25-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 SMART SM00411 1 91 1.3E-40 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 PANTHER PTHR33175 1 93 1.1E-47 T 25-04-2016 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.893 T 25-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 25-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.3E-28 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 Gene3D G3DSA:4.10.520.10 1 91 1.1E-31 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS09715 266726d8c116a77b7714b8a5ee7954f5 101 SUPERFAMILY SSF47729 1 91 1.41E-29 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS01690 7bff5fea0ef0b46368dee6c5bec446b1 407 PANTHER PTHR24421:SF10 37 396 4.8E-67 T 25-04-2016 SMD_RS01690 7bff5fea0ef0b46368dee6c5bec446b1 407 PANTHER PTHR24421 37 396 4.8E-67 T 25-04-2016 SMD_RS01690 7bff5fea0ef0b46368dee6c5bec446b1 407 Gene3D G3DSA:3.30.565.10 297 388 1.2E-9 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01690 7bff5fea0ef0b46368dee6c5bec446b1 407 Pfam PF07730 Histidine kinase 203 269 6.6E-16 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMD_RS01690 7bff5fea0ef0b46368dee6c5bec446b1 407 SMART SM00387 299 388 4.3E-6 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01690 7bff5fea0ef0b46368dee6c5bec446b1 407 SUPERFAMILY SSF55874 274 386 2.73E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09685 74793753b2d3def7e6076a046b777446 295 SUPERFAMILY SSF56317 6 292 1.07E-87 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS09685 74793753b2d3def7e6076a046b777446 295 PANTHER PTHR23088 7 292 1.4E-141 T 25-04-2016 SMD_RS09685 74793753b2d3def7e6076a046b777446 295 Gene3D G3DSA:3.60.110.10 6 291 2.7E-101 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS09685 74793753b2d3def7e6076a046b777446 295 PANTHER PTHR23088:SF11 7 292 1.4E-141 T 25-04-2016 SMD_RS09685 74793753b2d3def7e6076a046b777446 295 Pfam PF00795 Carbon-nitrogen hydrolase 8 272 9.9E-57 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Pfam PF10410 DnaB-helicase binding domain of primase 366 418 4.3E-13 T 25-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 SMART SM00493 256 327 8.1E-20 T 25-04-2016 IPR006171 Toprim domain SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Gene3D G3DSA:1.10.860.10 431 575 3.7E-40 T 25-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 TIGRFAM TIGR01391 dnaG: DNA primase 3 415 2.7E-139 T 25-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Hamap MF_00974 DNA primase [dnaG]. 3 572 28.798 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 SUPERFAMILY SSF56731 114 418 1.57E-106 T 25-04-2016 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Pfam PF01807 CHC2 zinc finger 5 100 3.4E-38 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 PANTHER PTHR30313 2 578 2.0E-156 T 25-04-2016 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 SMART SM00400 35 89 1.8E-31 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Gene3D G3DSA:1.20.50.20 365 420 1.5E-22 T 25-04-2016 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Gene3D G3DSA:3.90.980.10 113 237 9.5E-42 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Pfam PF13662 Toprim domain 257 320 3.3E-13 T 25-04-2016 IPR006171 Toprim domain SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 SUPERFAMILY SSF57783 1 100 4.76E-35 T 25-04-2016 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Gene3D G3DSA:3.90.580.10 2 100 4.5E-39 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Pfam PF08278 DNA primase DnaG DnaB-binding 447 570 1.2E-26 T 25-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 248 5.2E-41 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 SUPERFAMILY SSF117023 443 574 2.09E-33 T 25-04-2016 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 SMART SM00766 446 571 6.5E-31 T 25-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SMD_RS02090 4c9c770d6c95ae99a9ac6ff712b2b3a9 579 Gene3D G3DSA:3.40.1360.10 238 363 2.1E-44 T 25-04-2016 SMD_RS14575 14ed5fd1aeed17ebfc2ca0fb1ddd7a06 113 PANTHER PTHR30041 1 113 3.9E-34 T 25-04-2016 SMD_RS14575 14ed5fd1aeed17ebfc2ca0fb1ddd7a06 113 Pfam PF03960 ArsC family 10 112 9.9E-16 T 25-04-2016 IPR006660 Arsenate reductase-like SMD_RS14575 14ed5fd1aeed17ebfc2ca0fb1ddd7a06 113 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 113 3.0E-38 T 25-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SMD_RS14575 14ed5fd1aeed17ebfc2ca0fb1ddd7a06 113 PANTHER PTHR30041:SF4 1 113 3.9E-34 T 25-04-2016 SMD_RS14575 14ed5fd1aeed17ebfc2ca0fb1ddd7a06 113 SUPERFAMILY SSF52833 2 113 1.95E-29 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14575 14ed5fd1aeed17ebfc2ca0fb1ddd7a06 113 Gene3D G3DSA:3.40.30.10 1 113 3.4E-43 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14870 8510996661c3a7ee45cfb4ee4709a2d0 383 PANTHER PTHR30365:SF6 4 383 1.7E-167 T 25-04-2016 SMD_RS14870 8510996661c3a7ee45cfb4ee4709a2d0 383 PANTHER PTHR30365 4 383 1.7E-167 T 25-04-2016 SMD_RS14870 8510996661c3a7ee45cfb4ee4709a2d0 383 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 380 1.5E-135 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SMD_RS14870 8510996661c3a7ee45cfb4ee4709a2d0 383 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 366 9.6E-108 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SMD_RS14870 8510996661c3a7ee45cfb4ee4709a2d0 383 PIRSF PIRSF000267 6 382 7.4E-120 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 25-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 2.7E-54 T 25-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 292 1.6E-32 T 25-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 PANTHER PTHR22981 1 292 1.4E-117 T 25-04-2016 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 Gene3D G3DSA:1.10.1040.10 164 293 1.0E-42 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 Gene3D G3DSA:3.40.50.720 2 162 4.7E-63 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 7.5E-126 T 25-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 SUPERFAMILY SSF48179 164 292 1.36E-38 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 SUPERFAMILY SSF51735 1 162 2.23E-48 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS01370 e365b0383bce38829ed71646662d5e3e 296 PIRSF PIRSF000103 1 296 1.4E-84 T 25-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 PANTHER PTHR24221 40 410 2.8E-31 T 25-04-2016 SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 SUPERFAMILY SSF90123 35 323 1.57E-37 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 SUPERFAMILY SSF52540 347 530 1.12E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 SMART SM00382 377 532 9.7E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 Gene3D G3DSA:1.20.1560.10 40 340 1.8E-36 T 25-04-2016 SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 Pfam PF00005 ABC transporter 370 485 5.0E-16 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 Gene3D G3DSA:3.40.50.300 355 529 2.6E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19345 2abed619372ab56a0935fe8ef0c586e4 547 Pfam PF00664 ABC transporter transmembrane region 45 304 1.6E-23 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS14695 954987d29ad3747b964634c8610c2f54 269 Hamap MF_00548 Zinc transporter ZupT [zupT]. 9 268 33.076 T 25-04-2016 IPR023498 Zinc transporter ZupT SMD_RS14695 954987d29ad3747b964634c8610c2f54 269 Pfam PF02535 ZIP Zinc transporter 121 261 1.0E-20 T 25-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SMD_RS14695 954987d29ad3747b964634c8610c2f54 269 Pfam PF02535 ZIP Zinc transporter 10 110 8.0E-8 T 25-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SMD_RS14695 954987d29ad3747b964634c8610c2f54 269 PANTHER PTHR11040:SF56 7 262 4.3E-84 T 25-04-2016 SMD_RS14695 954987d29ad3747b964634c8610c2f54 269 PANTHER PTHR11040 7 262 4.3E-84 T 25-04-2016 SMD_RS21095 3cf342205cc6520e9cf88e4fca858efe 389 Gene3D G3DSA:2.70.50.50 26 207 1.5E-50 T 25-04-2016 SMD_RS21095 3cf342205cc6520e9cf88e4fca858efe 389 PANTHER PTHR34823 1 386 9.7E-85 T 25-04-2016 SMD_RS21095 3cf342205cc6520e9cf88e4fca858efe 389 SUPERFAMILY SSF81296 26 207 1.68E-48 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS21095 3cf342205cc6520e9cf88e4fca858efe 389 PANTHER PTHR34823:SF2 1 386 9.7E-85 T 25-04-2016 SMD_RS21095 3cf342205cc6520e9cf88e4fca858efe 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 204 1.0E-40 T 25-04-2016 IPR004302 Chitin-binding protein, N-terminal SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 Gene3D G3DSA:3.90.640.10 332 373 8.0E-4 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 SUPERFAMILY SSF53067 234 294 6.22E-27 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 SUPERFAMILY SSF53067 332 450 6.22E-27 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 Gene3D G3DSA:3.30.420.40 243 265 3.9E-9 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 Gene3D G3DSA:3.30.420.40 378 433 3.9E-9 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 Gene3D G3DSA:3.30.420.40 111 242 7.8E-29 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 Gene3D G3DSA:3.30.420.40 3 45 7.8E-29 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 PANTHER PTHR19375 111 287 3.2E-49 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 PANTHER PTHR19375 1 49 3.2E-49 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 PANTHER PTHR19375 329 447 3.2E-49 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 PANTHER PTHR19375:SF182 111 287 3.2E-49 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 PANTHER PTHR19375:SF182 1 49 3.2E-49 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 PANTHER PTHR19375:SF182 329 447 3.2E-49 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 SUPERFAMILY SSF53067 111 228 4.53E-22 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 SUPERFAMILY SSF53067 1 41 4.53E-22 T 25-04-2016 SMD_RS16045 46c3f7e0564e9dc1a557dad947962a62 453 Pfam PF00012 Hsp70 protein 149 254 2.9E-9 T 25-04-2016 IPR013126 Heat shock protein 70 family SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 Gene3D G3DSA:2.40.50.140 1 72 4.9E-40 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.3E-37 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 PANTHER PTHR33370 1 72 1.7E-47 T 25-04-2016 SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.52 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.0E-28 T 25-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 SUPERFAMILY SSF50249 1 70 1.59E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS11065 4fb6e26fe30f0a19847d6a1778ba0807 72 SMART SM00316 4 72 1.6E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 SUPERFAMILY SSF53597 2 163 9.54E-55 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PANTHER PTHR22778:SF16 1 163 1.8E-43 T 25-04-2016 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 Pfam PF00186 Dihydrofolate reductase 2 162 1.9E-57 T 25-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PIRSF PIRSF000194 1 163 1.1E-58 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PRINTS PR00070 Dihydrofolate reductase signature 94 108 2.8E-13 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.8E-13 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.8E-13 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.8E-13 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 Gene3D G3DSA:3.40.430.10 2 163 8.4E-56 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 PANTHER PTHR22778 1 163 1.8E-43 T 25-04-2016 SMD_RS03730 711d2bc16d61fe999ca7c5fce97e8de8 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 25-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PANTHER PTHR11686 1 572 4.8E-251 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 Pfam PF01019 Gamma-glutamyltranspeptidase 59 567 1.7E-161 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 45 564 1.3E-117 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 155 174 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 459 476 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 137 155 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 435 450 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 66 91 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 404 422 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 380 398 2.5E-43 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 PANTHER PTHR11686:SF8 1 572 4.8E-251 T 25-04-2016 SMD_RS18235 58d04765bada9f6972b183afb98330af 572 SUPERFAMILY SSF56235 33 572 6.75E-177 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS16725 330dbb8cc03aa9c4aa2d1d451832e522 109 SUPERFAMILY SSF103481 7 105 3.01E-7 T 25-04-2016 SMD_RS16725 330dbb8cc03aa9c4aa2d1d451832e522 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 4.8E-42 T 25-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SMD_RS16725 330dbb8cc03aa9c4aa2d1d451832e522 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 26.391 T 25-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SMD_RS16725 330dbb8cc03aa9c4aa2d1d451832e522 109 PANTHER PTHR36116 1 107 1.6E-49 T 25-04-2016 SMD_RS16725 330dbb8cc03aa9c4aa2d1d451832e522 109 PANTHER PTHR36116:SF1 1 107 1.6E-49 T 25-04-2016 SMD_RS14025 589846a2b715c2405449674530c7ed4a 163 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 18 141 1.1E-43 T 25-04-2016 IPR008769 Poly granule associated SMD_RS14025 589846a2b715c2405449674530c7ed4a 163 PANTHER PTHR38664:SF1 1 163 2.1E-26 T 25-04-2016 SMD_RS14025 589846a2b715c2405449674530c7ed4a 163 PANTHER PTHR38664 1 163 2.1E-26 T 25-04-2016 SMD_RS14025 589846a2b715c2405449674530c7ed4a 163 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 26 142 8.4E-37 T 25-04-2016 IPR008769 Poly granule associated SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 SUPERFAMILY SSF52172 1 196 1.85E-30 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Gene3D G3DSA:3.40.50.2300 1 134 1.3E-28 T 25-04-2016 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Gene3D G3DSA:1.10.10.60 408 441 2.7E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 25-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 SMART SM00382 174 317 6.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Pfam PF00158 Sigma-54 interaction domain 158 320 4.0E-63 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 SUPERFAMILY SSF46689 359 445 3.45E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 SUPERFAMILY SSF52540 156 387 6.96E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Gene3D G3DSA:1.10.8.60 327 388 6.5E-18 T 25-04-2016 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 PANTHER PTHR32071 3 448 4.1E-156 T 25-04-2016 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 SMART SM00448 2 118 1.1E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Pfam PF02954 Bacterial regulatory protein, Fis family 407 443 2.0E-11 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 409 426 3.8E-6 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 446 3.8E-6 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Pfam PF00072 Response regulator receiver domain 4 118 1.3E-18 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 Gene3D G3DSA:3.40.50.300 158 325 4.0E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19105 58faf8ebef71e9f5200a32c61412413e 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 25-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SMD_RS11120 af8c97bbf8a072d659dc2dce2ccb29a5 342 SUPERFAMILY SSF53474 48 322 3.88E-52 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11120 af8c97bbf8a072d659dc2dce2ccb29a5 342 PANTHER PTHR40841:SF2 8 270 2.2E-65 T 25-04-2016 SMD_RS11120 af8c97bbf8a072d659dc2dce2ccb29a5 342 Pfam PF00756 Putative esterase 67 244 4.5E-15 T 25-04-2016 IPR000801 Putative esterase SMD_RS11120 af8c97bbf8a072d659dc2dce2ccb29a5 342 Gene3D G3DSA:3.40.50.1820 56 322 7.1E-66 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11120 af8c97bbf8a072d659dc2dce2ccb29a5 342 PANTHER PTHR40841 8 270 2.2E-65 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 PANTHER PTHR30069:SF7 325 662 1.2E-83 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 PANTHER PTHR30069:SF7 680 978 1.2E-83 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 PANTHER PTHR30069:SF7 29 295 1.2E-83 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Pfam PF00593 TonB dependent receptor 619 989 9.9E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 176 9.3E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Gene3D G3DSA:2.170.130.10 38 179 1.6E-33 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Gene3D G3DSA:2.40.170.20 791 990 8.3E-85 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Gene3D G3DSA:2.40.170.20 418 667 8.3E-85 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Gene3D G3DSA:2.40.170.20 180 243 8.3E-85 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Gene3D G3DSA:2.40.170.20 699 748 8.3E-85 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 Gene3D G3DSA:2.40.170.20 302 370 8.3E-85 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 PANTHER PTHR30069 325 662 1.2E-83 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 PANTHER PTHR30069 680 978 1.2E-83 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 PANTHER PTHR30069 29 295 1.2E-83 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 SUPERFAMILY SSF56935 802 990 2.12E-100 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 SUPERFAMILY SSF56935 415 647 2.12E-100 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 SUPERFAMILY SSF56935 322 373 2.12E-100 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 SUPERFAMILY SSF56935 705 749 2.12E-100 T 25-04-2016 SMD_RS20780 6369f93f5d8324d56275213cf01ecf17 991 SUPERFAMILY SSF56935 33 240 2.12E-100 T 25-04-2016 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 SUPERFAMILY SSF90123 28 349 3.01E-26 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 SUPERFAMILY SSF52540 369 618 7.21E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 PANTHER PTHR24221:SF157 31 623 9.6E-180 T 25-04-2016 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 Gene3D G3DSA:3.40.50.300 379 612 6.2E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 PANTHER PTHR24221 31 623 9.6E-180 T 25-04-2016 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 ProSitePatterns PS00211 ABC transporters family signature. 520 534 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 Gene3D G3DSA:1.20.1560.10 30 358 3.6E-18 T 25-04-2016 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 Pfam PF00005 ABC transporter 395 548 2.8E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS14605 70bf358ff4ab1c751663f526711004d8 623 SMART SM00382 403 594 1.3E-19 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 PANTHER PTHR30537 1 296 8.5E-99 T 25-04-2016 SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 PANTHER PTHR30537:SF5 1 296 8.5E-99 T 25-04-2016 SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 Gene3D G3DSA:1.10.10.10 6 88 4.0E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 Gene3D G3DSA:3.40.190.10 181 263 1.3E-5 T 25-04-2016 SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 SUPERFAMILY SSF53850 93 296 6.33E-41 T 25-04-2016 SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-14 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 SUPERFAMILY SSF46785 6 88 1.47E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 Gene3D G3DSA:3.40.190.10 109 180 3.7E-21 T 25-04-2016 SMD_RS02450 c97fd112131d12ac6459f9139dbf19c7 299 Pfam PF03466 LysR substrate binding domain 91 295 3.6E-41 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS18610 0cc1477c019cc912ee9f9800e49141f2 200 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 193 1.3E-69 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SMD_RS18610 0cc1477c019cc912ee9f9800e49141f2 200 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 26.7 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SMD_RS18610 0cc1477c019cc912ee9f9800e49141f2 200 PANTHER PTHR11649 5 200 2.7E-49 T 25-04-2016 SMD_RS18610 0cc1477c019cc912ee9f9800e49141f2 200 Gene3D G3DSA:3.40.50.300 7 193 1.5E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18610 0cc1477c019cc912ee9f9800e49141f2 200 SUPERFAMILY SSF52540 9 195 3.54E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18610 0cc1477c019cc912ee9f9800e49141f2 200 Pfam PF01926 50S ribosome-binding GTPase 27 138 2.4E-19 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 ProSitePatterns PS00855 Signal peptidases II signature. 100 112 - T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 97 112 1.5E-17 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 133 149 1.5E-17 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 49 57 1.5E-17 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 PANTHER PTHR33695:SF1 7 152 2.0E-51 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 PANTHER PTHR33695 7 152 2.0E-51 T 25-04-2016 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 Pfam PF01252 Signal peptidase (SPase) II 11 150 5.7E-35 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 155 15.186 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS11205 a39033412f53363792d6d198e153f84f 156 TIGRFAM TIGR00077 lspA: signal peptidase II 6 152 3.9E-38 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 Gene3D G3DSA:1.20.140.10 223 384 6.4E-65 T 25-04-2016 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 Gene3D G3DSA:1.10.540.10 4 123 9.8E-40 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 PANTHER PTHR10909 6 383 3.9E-280 T 25-04-2016 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 2.1E-27 T 25-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 Gene3D G3DSA:2.40.110.10 126 222 1.2E-41 T 25-04-2016 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 PANTHER PTHR10909:SF326 6 383 3.9E-280 T 25-04-2016 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 1.8E-41 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 SUPERFAMILY SSF56645 5 247 2.36E-84 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 122 2.4E-34 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS01240 6aad6fa793371d28b0cc20482d37f5e2 387 SUPERFAMILY SSF47203 233 385 5.64E-46 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS02905 51c1cb0a85a5ffecfc8b81321f144a08 496 PANTHER PTHR10108 44 150 7.5E-25 T 25-04-2016 SMD_RS02905 51c1cb0a85a5ffecfc8b81321f144a08 496 PANTHER PTHR10108 476 488 7.5E-25 T 25-04-2016 SMD_RS02905 51c1cb0a85a5ffecfc8b81321f144a08 496 Pfam PF08241 Methyltransferase domain 48 141 4.6E-22 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS02905 51c1cb0a85a5ffecfc8b81321f144a08 496 Gene3D G3DSA:3.40.50.150 26 180 4.0E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02905 51c1cb0a85a5ffecfc8b81321f144a08 496 SUPERFAMILY SSF53335 31 187 3.38E-32 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 PANTHER PTHR30093:SF9 16 146 1.6E-42 T 25-04-2016 SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 PANTHER PTHR30093 16 146 1.6E-42 T 25-04-2016 SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 56 74 3.9E-11 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 20 45 3.9E-11 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 SUPERFAMILY SSF54523 48 144 7.85E-23 T 25-04-2016 SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 3.6E-4 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 20 145 1.4E-27 T 25-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 Pfam PF08334 Type II secretion system (T2SS), protein G 43 144 2.0E-28 T 25-04-2016 IPR013545 Type II secretion system protein G SMD_RS03160 cae0479cfe38da7e6a0d8e0910c09bbb 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 Pfam PF01627 Hpt domain 167 240 2.0E-7 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 PANTHER PTHR26402:SF555 10 125 3.0E-32 T 25-04-2016 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 SUPERFAMILY SSF47226 104 117 7.59E-13 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 SUPERFAMILY SSF47226 146 232 7.59E-13 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 Pfam PF00072 Response regulator receiver domain 13 122 1.6E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 Gene3D G3DSA:1.20.120.160 158 228 1.0E-9 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 PANTHER PTHR26402 10 125 3.0E-32 T 25-04-2016 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 Gene3D G3DSA:3.40.50.2300 9 125 1.7E-28 T 25-04-2016 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 SMART SM00448 10 121 3.1E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16210 63b74ea2b42138287b78813a199c1a08 242 SUPERFAMILY SSF52172 9 125 5.12E-29 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 PANTHER PTHR21600 4 235 8.9E-129 T 25-04-2016 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 SUPERFAMILY SSF55120 69 230 1.01E-36 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 Pfam PF00849 RNA pseudouridylate synthase 70 149 2.1E-13 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 SMART SM00363 3 65 1.4E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 Gene3D G3DSA:3.10.290.10 3 58 4.9E-19 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 PANTHER PTHR21600:SF24 4 235 8.9E-129 T 25-04-2016 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 SUPERFAMILY SSF55174 4 56 1.85E-11 T 25-04-2016 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 Pfam PF01479 S4 domain 4 48 1.4E-8 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06805 7e4367287fd0ed695cfd2d1bb95f6446 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 227 2.7E-46 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 Gene3D G3DSA:1.10.1200.80 251 322 1.6E-20 T 25-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 Gene3D G3DSA:3.20.20.70 8 245 7.1E-83 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 Pfam PF01207 Dihydrouridine synthase (Dus) 13 312 6.0E-104 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.531 T 25-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 PIRSF PIRSF006621 1 328 1.3E-108 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 25-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 317 1.6E-121 T 25-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 PANTHER PTHR11082 1 319 7.0E-143 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 SUPERFAMILY SSF51395 11 318 5.31E-90 T 25-04-2016 SMD_RS03615 2e7a2e98bd46264071b6d0e400913bc4 331 PANTHER PTHR11082:SF25 1 319 7.0E-143 T 25-04-2016 SMD_RS09265 e5d19cdc5ea18fd03db0702f192f7a0e 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 9.9E-82 T 25-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMD_RS09265 e5d19cdc5ea18fd03db0702f192f7a0e 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.0E-64 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS09265 e5d19cdc5ea18fd03db0702f192f7a0e 210 SUPERFAMILY SSF53271 4 206 2.75E-64 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS09265 e5d19cdc5ea18fd03db0702f192f7a0e 210 PANTHER PTHR10285 1 197 7.1E-90 T 25-04-2016 SMD_RS09265 e5d19cdc5ea18fd03db0702f192f7a0e 210 Gene3D G3DSA:3.40.50.2020 2 207 7.2E-73 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS09265 e5d19cdc5ea18fd03db0702f192f7a0e 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.539 T 25-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 SUPERFAMILY SSF56935 644 688 4.58E-89 T 25-04-2016 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 SUPERFAMILY SSF56935 307 603 4.58E-89 T 25-04-2016 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 SUPERFAMILY SSF56935 27 229 4.58E-89 T 25-04-2016 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 SUPERFAMILY SSF56935 740 907 4.58E-89 T 25-04-2016 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 PANTHER PTHR30069:SF7 7 827 1.4E-173 T 25-04-2016 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 Pfam PF00593 TonB dependent receptor 574 906 2.0E-27 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 169 7.0E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 Gene3D G3DSA:2.40.170.20 380 907 1.1E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 Gene3D G3DSA:2.40.170.20 172 246 1.1E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 Gene3D G3DSA:2.40.170.20 306 341 1.1E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 Gene3D G3DSA:2.170.130.10 29 171 2.2E-35 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13290 dc3dcd7a3355a1c26efb25ac248e7bcd 908 PANTHER PTHR30069 7 827 1.4E-173 T 25-04-2016 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 SUPERFAMILY SSF140490 339 436 8.76E-35 T 25-04-2016 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 1.5E-194 T 25-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 PANTHER PTHR11780 20 429 1.8E-210 T 25-04-2016 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 8.1E-43 T 25-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 SUPERFAMILY SSF142984 255 338 6.41E-22 T 25-04-2016 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 25-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 SMART SM00928 343 388 3.2E-26 T 25-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 Pfam PF10531 SLBB domain 257 305 4.9E-9 T 25-04-2016 IPR019554 Soluble ligand binding domain SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 PANTHER PTHR11780:SF10 20 429 1.8E-210 T 25-04-2016 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 SUPERFAMILY SSF142019 19 251 1.7E-78 T 25-04-2016 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 1.0E-29 T 25-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SMD_RS15455 dd0e1bbe90aab3e232f90b4a034fdf29 446 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 25-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 SMART SM00829 10 332 1.1E-10 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 335 8.3E-158 T 25-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 SUPERFAMILY SSF50129 1 144 5.35E-34 T 25-04-2016 IPR011032 GroES-like SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 Gene3D G3DSA:3.90.180.10 2 156 3.3E-36 T 25-04-2016 IPR011032 GroES-like SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 PANTHER PTHR11695 19 333 8.5E-124 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 5.5E-6 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 SUPERFAMILY SSF51735 116 284 7.69E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 148 169 - T 25-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 PANTHER PTHR11695:SF558 19 333 8.5E-124 T 25-04-2016 SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 Gene3D G3DSA:3.40.50.720 157 262 1.5E-15 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21895 1ec9b9caad89c42d6550569af93f8cbb 335 Pfam PF13602 Zinc-binding dehydrogenase 192 332 3.9E-23 T 25-04-2016 SMD_RS16890 2ac5bc5f16544635e228ca0fe73136e2 312 Gene3D G3DSA:3.40.50.1820 56 303 6.0E-66 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16890 2ac5bc5f16544635e228ca0fe73136e2 312 Pfam PF00756 Putative esterase 57 275 8.9E-23 T 25-04-2016 IPR000801 Putative esterase SMD_RS16890 2ac5bc5f16544635e228ca0fe73136e2 312 PANTHER PTHR10907:SF60 58 295 3.6E-37 T 25-04-2016 SMD_RS16890 2ac5bc5f16544635e228ca0fe73136e2 312 PANTHER PTHR10907 58 295 3.6E-37 T 25-04-2016 SMD_RS16890 2ac5bc5f16544635e228ca0fe73136e2 312 SUPERFAMILY SSF53474 39 303 2.7E-56 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 PIRSF PIRSF000193 3 271 2.8E-70 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 Gene3D G3DSA:3.40.50.720 4 161 3.2E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 PANTHER PTHR11645 1 273 2.3E-104 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 PANTHER PTHR11645:SF0 1 273 2.3E-104 T 25-04-2016 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 5.5E-16 T 25-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 5.2E-83 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 SUPERFAMILY SSF51735 6 161 2.5E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 268 9.7E-34 T 25-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 Gene3D G3DSA:1.10.3730.10 164 268 6.1E-36 T 25-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 26.054 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMD_RS05325 e4a8097a2f3f4c4b3aeb78faea7461ee 273 SUPERFAMILY SSF48179 164 269 9.35E-32 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS19830 912bc9bdd501834e46632ad586dc1fc0 112 Gene3D G3DSA:3.30.70.830 6 109 2.0E-38 T 25-04-2016 SMD_RS19830 912bc9bdd501834e46632ad586dc1fc0 112 PANTHER PTHR23419 6 112 6.9E-39 T 25-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SMD_RS19830 912bc9bdd501834e46632ad586dc1fc0 112 SUPERFAMILY SSF54913 5 108 1.96E-36 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMD_RS19830 912bc9bdd501834e46632ad586dc1fc0 112 Pfam PF03091 CutA1 divalent ion tolerance protein 9 105 4.4E-34 T 25-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 132 143 - T 25-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 PANTHER PTHR11473 30 249 4.8E-86 T 25-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 89 111 3.2E-13 T 25-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 228 247 3.2E-13 T 25-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 196 214 3.2E-13 T 25-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 33 252 3.8E-48 T 25-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 Gene3D G3DSA:1.10.800.10 26 289 8.2E-98 T 25-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 SUPERFAMILY SSF56534 20 293 1.01E-101 T 25-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SMD_RS00270 bb34780deb31aaeeba22e28d63407452 297 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 27 270 6.5E-109 T 25-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 SMD_RS11135 2ea9539f9bdcc02cc6b70aa55ee5d0f7 347 SUPERFAMILY SSF81345 6 340 5.36E-85 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMD_RS11135 2ea9539f9bdcc02cc6b70aa55ee5d0f7 347 PANTHER PTHR30472:SF3 4 346 2.3E-126 T 25-04-2016 SMD_RS11135 2ea9539f9bdcc02cc6b70aa55ee5d0f7 347 PANTHER PTHR30472 4 346 2.3E-126 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMD_RS11135 2ea9539f9bdcc02cc6b70aa55ee5d0f7 347 Pfam PF01032 FecCD transport family 22 339 4.8E-94 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMD_RS11135 2ea9539f9bdcc02cc6b70aa55ee5d0f7 347 Gene3D G3DSA:1.10.3470.10 7 344 1.7E-109 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMD_RS06590 34bc27f32763e1d10dc8b46b629eb7da 132 SUPERFAMILY SSF103481 39 120 4.97E-13 T 25-04-2016 SMD_RS06590 34bc27f32763e1d10dc8b46b629eb7da 132 Pfam PF00892 EamA-like transporter family 39 116 5.8E-11 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS08095 884edf5b32244b06f1588bb7f8aa2b70 301 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 1.8E-49 T 25-04-2016 IPR021960 Protein of unknown function DUF3577 SMD_RS08095 884edf5b32244b06f1588bb7f8aa2b70 301 Pfam PF12101 Protein of unknown function (DUF3577) 5 123 3.0E-37 T 25-04-2016 IPR021960 Protein of unknown function DUF3577 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 SMART SM00388 366 434 4.1E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 SUPERFAMILY SSF55785 208 337 9.77E-16 T 25-04-2016 IPR000014 PAS domain SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 2.0E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 574 2.0E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 593 2.0E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Pfam PF08448 PAS fold 233 340 5.7E-8 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 595 6.1E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Pfam PF05227 CHASE3 domain 43 174 7.3E-24 T 25-04-2016 IPR007891 CHASE3 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 SUPERFAMILY SSF47384 351 432 2.94E-17 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 SUPERFAMILY SSF55874 423 594 8.91E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Gene3D G3DSA:3.30.565.10 434 596 1.2E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PANTHER PTHR24423 207 594 7.9E-94 T 25-04-2016 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PANTHER PTHR24423 1 6 7.9E-94 T 25-04-2016 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Gene3D G3DSA:1.10.287.130 358 430 2.1E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 432 8.6E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 Gene3D G3DSA:3.30.450.20 211 337 5.3E-14 T 25-04-2016 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 SMART SM00387 483 596 1.2E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PANTHER PTHR24423:SF383 207 594 7.9E-94 T 25-04-2016 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 PANTHER PTHR24423:SF383 1 6 7.9E-94 T 25-04-2016 SMD_RS18785 145d585e8b09603ae15e5147a919e25c 605 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 222 339 5.7E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.6E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 PANTHER PTHR30537 1 296 4.5E-135 T 25-04-2016 SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 PANTHER PTHR30537:SF17 1 296 4.5E-135 T 25-04-2016 SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 SUPERFAMILY SSF46785 4 112 1.09E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 Gene3D G3DSA:3.40.190.10 176 264 6.7E-18 T 25-04-2016 SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 Gene3D G3DSA:3.40.190.10 92 175 4.1E-23 T 25-04-2016 SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 Pfam PF03466 LysR substrate binding domain 88 296 7.1E-40 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 SUPERFAMILY SSF53850 89 296 1.59E-41 T 25-04-2016 SMD_RS21465 57861cdb08b8633a40f05e0f73efbb18 297 Gene3D G3DSA:1.10.10.10 3 84 1.0E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Gene3D G3DSA:3.40.50.300 2 105 1.0E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Gene3D G3DSA:3.40.50.300 180 277 1.0E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 35.919 T 25-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 SUPERFAMILY SSF52540 2 628 4.66E-159 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Gene3D G3DSA:3.40.50.300 278 381 4.3E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Gene3D G3DSA:3.40.50.300 540 628 4.3E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 PANTHER PTHR11070 1 645 0.0 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 603 4.2E-63 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Gene3D G3DSA:1.10.10.160 109 179 4.6E-15 T 25-04-2016 IPR013986 DExx box DNA helicase domain SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 PANTHER PTHR11070:SF19 1 645 0.0 T 25-04-2016 SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Gene3D G3DSA:1.10.486.10 382 523 1.5E-35 T 25-04-2016 SMD_RS00355 d57c09661c92efbdb3ba2ae4e21004ac 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 4.3E-72 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMD_RS12630 fdf1e8259de5894f218609e4c8c1ded9 301 Pfam PF03934 Type II secretion system (T2SS), protein K 38 285 1.3E-34 T 25-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SMD_RS12630 fdf1e8259de5894f218609e4c8c1ded9 301 PIRSF PIRSF002786 9 300 1.4E-36 T 25-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Pfam PF13302 Acetyltransferase (GNAT) domain 742 879 4.5E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 SUPERFAMILY SSF52210 298 455 6.67E-36 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 SUPERFAMILY SSF56059 491 707 6.48E-29 T 25-04-2016 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 PANTHER PTHR11117:SF8 23 712 1.9E-277 T 25-04-2016 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 PANTHER PTHR11117 23 712 1.9E-277 T 25-04-2016 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 SMART SM00881 9 104 7.7E-22 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 SUPERFAMILY SSF52210 131 292 2.35E-34 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 SUPERFAMILY SSF55729 740 880 1.89E-20 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Pfam PF13549 ATP-grasp domain 483 707 3.6E-73 T 25-04-2016 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Gene3D G3DSA:3.40.50.261 133 289 1.5E-28 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Gene3D G3DSA:3.40.630.30 745 880 1.3E-16 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Gene3D G3DSA:3.40.50.261 297 448 8.4E-12 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Pfam PF13380 CoA binding domain 14 135 3.1E-21 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Gene3D G3DSA:3.40.50.720 2 132 1.3E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 1.2E-45 T 25-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SMD_RS21205 4c360abc39135fc5230a27c2659d76ac 908 SUPERFAMILY SSF51735 1 139 1.45E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 5.9E-53 T 25-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 PANTHER PTHR30411:SF0 1 153 3.8E-61 T 25-04-2016 SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 Gene3D G3DSA:3.90.960.10 1 154 1.5E-53 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 1.3E-25 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 PIRSF PIRSF006181 1 157 1.5E-51 T 25-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 SUPERFAMILY SSF55826 2 153 5.89E-39 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMD_RS03555 ac3030ceca69ee3311da2b65ae85e805 157 PANTHER PTHR30411 1 153 3.8E-61 T 25-04-2016 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Pfam PF00258 Flavodoxin 16 142 5.1E-25 T 25-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 410 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 376 395 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 414 425 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 311 318 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 468 476 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 214 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 445 461 1.0E-18 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Pfam PF00175 Oxidoreductase NAD-binding domain 377 481 2.8E-13 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00369 Flavodoxin signature 90 100 3.5E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00369 Flavodoxin signature 60 71 3.5E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PRINTS PR00369 Flavodoxin signature 14 27 3.5E-8 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Pfam PF00667 FAD binding domain 170 234 1.8E-10 T 25-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Gene3D G3DSA:3.40.50.80 374 507 1.2E-37 T 25-04-2016 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 PANTHER PTHR19384 12 489 2.2E-108 T 25-04-2016 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 SUPERFAMILY SSF52343 364 509 3.01E-37 T 25-04-2016 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Gene3D G3DSA:1.20.990.10 238 307 5.6E-6 T 25-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 SUPERFAMILY SSF52218 12 150 6.28E-35 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 SUPERFAMILY SSF63380 164 366 4.16E-38 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Gene3D G3DSA:2.40.30.10 165 214 1.6E-20 T 25-04-2016 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Gene3D G3DSA:2.40.30.10 308 373 1.6E-20 T 25-04-2016 SMD_RS12715 9d3960da377b70ded7b1a43def81a805 509 Gene3D G3DSA:3.40.50.360 12 151 1.0E-34 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 1.9E-57 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 Gene3D G3DSA:3.40.190.10 41 149 1.7E-17 T 25-04-2016 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PANTHER PTHR30222 1 369 1.8E-156 T 25-04-2016 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 332 3.5E-36 T 25-04-2016 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 Gene3D G3DSA:3.40.190.10 150 317 9.9E-70 T 25-04-2016 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 SUPERFAMILY SSF53850 29 368 3.02E-102 T 25-04-2016 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PANTHER PTHR30222:SF11 1 369 1.8E-156 T 25-04-2016 SMD_RS07390 9b2d454840db0f66559fac3dba3f34be 369 PIRSF PIRSF019574 1 369 6.4E-136 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 Pfam PF00376 MerR family regulatory protein 7 43 7.6E-14 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 Pfam PF09278 MerR, DNA binding 48 113 5.0E-18 T 25-04-2016 IPR015358 Transcription regulator MerR, DNA binding SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 5 140 1.9E-67 T 25-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 Gene3D G3DSA:1.10.1660.10 60 135 3.3E-15 T 25-04-2016 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 PANTHER PTHR30204 1 136 7.2E-75 T 25-04-2016 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 SUPERFAMILY SSF46955 6 127 6.59E-29 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 Gene3D G3DSA:1.10.1660.10 4 59 2.6E-20 T 25-04-2016 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 5.7E-12 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 5.7E-12 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 5.7E-12 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 PANTHER PTHR30204:SF0 1 136 7.2E-75 T 25-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS05310 595916a8d6988a087b343cf3d224eeb5 144 SMART SM00422 6 74 7.1E-25 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 PANTHER PTHR23132 1 358 4.2E-171 T 25-04-2016 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.9E-31 T 25-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 SUPERFAMILY SSF56059 140 354 1.48E-59 T 25-04-2016 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 SUPERFAMILY SSF52440 3 139 9.5E-35 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 41.407 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 Gene3D G3DSA:3.30.470.20 224 357 1.4E-50 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 Gene3D G3DSA:3.30.1490.20 159 222 5.9E-25 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 PANTHER PTHR23132:SF8 1 358 4.2E-171 T 25-04-2016 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 1.9E-109 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 Gene3D G3DSA:3.40.50.20 1 129 1.2E-35 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 PIRSF PIRSF039102 1 359 2.4E-126 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS01100 83d758fddc451ce9715f090eddd9fcf8 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 4.9E-75 T 25-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS16780 cb7efe07d4ea1f956e8461c667e8c88e 120 SMART SM00448 2 115 2.8E-35 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16780 cb7efe07d4ea1f956e8461c667e8c88e 120 SUPERFAMILY SSF52172 1 119 1.71E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS16780 cb7efe07d4ea1f956e8461c667e8c88e 120 Gene3D G3DSA:3.40.50.2300 1 119 2.5E-37 T 25-04-2016 SMD_RS16780 cb7efe07d4ea1f956e8461c667e8c88e 120 PANTHER PTHR26402 2 119 4.5E-39 T 25-04-2016 SMD_RS16780 cb7efe07d4ea1f956e8461c667e8c88e 120 Pfam PF00072 Response regulator receiver domain 4 116 9.8E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PANTHER PTHR13789:SF90 3 440 9.1E-72 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 344 4.5E-43 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 4.5E-43 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.5E-43 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 344 360 4.5E-43 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 308 4.5E-43 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 324 4.5E-43 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 SUPERFAMILY SSF51905 3 195 9.36E-51 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 SUPERFAMILY SSF51905 280 371 9.36E-51 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 PANTHER PTHR13789 3 440 9.1E-72 T 25-04-2016 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 Gene3D G3DSA:3.50.50.60 122 200 1.6E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 Gene3D G3DSA:3.50.50.60 281 365 1.6E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 Gene3D G3DSA:3.50.50.60 3 73 1.6E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS13865 994a385524eca4e71c15296c54407a32 507 Pfam PF01494 FAD binding domain 3 359 2.6E-59 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 3.5E-16 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 25-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 SUPERFAMILY SSF48498 95 173 2.62E-7 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 Gene3D G3DSA:1.10.357.10 9 159 1.1E-24 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 PANTHER PTHR30055 3 140 2.2E-19 T 25-04-2016 SMD_RS15255 1494978ee1e64439b9028f9da4261744 190 SUPERFAMILY SSF46689 6 87 2.03E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 SUPERFAMILY SSF158791 12 123 1.31E-18 T 25-04-2016 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 Pfam PF03448 MgtE intracellular N domain 24 124 1.2E-18 T 25-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 SMART SM00924 23 126 1.4E-19 T 25-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 SUPERFAMILY SSF54631 125 267 1.11E-26 T 25-04-2016 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 Gene3D G3DSA:1.10.357.20 272 452 4.1E-59 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 PANTHER PTHR11911:SF23 109 411 7.9E-43 T 25-04-2016 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 452 1.7E-107 T 25-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 Gene3D G3DSA:3.10.580.10 117 254 4.1E-19 T 25-04-2016 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 PANTHER PTHR11911 109 411 7.9E-43 T 25-04-2016 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 SMART SM00116 199 247 6.9E-11 T 25-04-2016 IPR000644 CBS domain SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 Gene3D G3DSA:1.25.60.10 12 116 3.2E-17 T 25-04-2016 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 Pfam PF00571 CBS domain 196 247 1.2E-7 T 25-04-2016 IPR000644 CBS domain SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 Pfam PF01769 Divalent cation transporter 314 445 3.4E-31 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMD_RS21210 bbdcc8e149e4f4c41c25fa9658e02a43 456 SUPERFAMILY SSF161093 272 451 1.7E-48 T 25-04-2016 SMD_RS01525 aaa6272836dd7299f7ea9c958fa9d1c1 249 Gene3D G3DSA:3.40.390.10 32 241 7.3E-27 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS01525 aaa6272836dd7299f7ea9c958fa9d1c1 249 PANTHER PTHR30164 4 249 3.1E-88 T 25-04-2016 SMD_RS01525 aaa6272836dd7299f7ea9c958fa9d1c1 249 Pfam PF06167 Glucose-regulated metallo-peptidase M90 9 240 3.5E-77 T 25-04-2016 IPR010384 MtfA family SMD_RS01525 aaa6272836dd7299f7ea9c958fa9d1c1 249 SUPERFAMILY SSF55486 32 241 2.27E-32 T 25-04-2016 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PANTHER PTHR10266:SF3 6 167 1.4E-63 T 25-04-2016 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PANTHER PTHR10266:SF3 196 249 1.4E-63 T 25-04-2016 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 SUPERFAMILY SSF46626 26 213 8.45E-47 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 Gene3D G3DSA:1.10.760.10 24 214 6.1E-63 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PRINTS PR00603 Cytochrome C1 signature 195 214 5.8E-8 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PRINTS PR00603 Cytochrome C1 signature 214 229 5.8E-8 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PRINTS PR00603 Cytochrome C1 signature 48 67 5.8E-8 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 Pfam PF02167 Cytochrome C1 family 40 248 4.6E-26 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PANTHER PTHR10266 6 167 1.4E-63 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 PANTHER PTHR10266 196 249 1.4E-63 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMD_RS07495 fb9468986d05b93cab8cd03d7bb2a5c2 249 Gene3D G3DSA:1.20.5.100 218 249 1.2E-13 T 25-04-2016 SMD_RS04655 94869316069d028ccf084ac677eae1f7 106 Pfam PF13744 Helix-turn-helix domain 13 92 2.0E-30 T 25-04-2016 SMD_RS04655 94869316069d028ccf084ac677eae1f7 106 Gene3D G3DSA:1.10.260.40 21 84 6.8E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS04655 94869316069d028ccf084ac677eae1f7 106 SUPERFAMILY SSF47413 21 97 2.67E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS02100 c227dc17ee5a958937dc5d81a8ba8273 147 Gene3D G3DSA:1.10.10.410 91 147 5.7E-23 T 25-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SMD_RS02100 c227dc17ee5a958937dc5d81a8ba8273 147 PANTHER PTHR28055 1 147 1.3E-53 T 25-04-2016 SMD_RS02100 c227dc17ee5a958937dc5d81a8ba8273 147 Pfam PF09424 Yqey-like protein 4 146 2.2E-56 T 25-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial SMD_RS02100 c227dc17ee5a958937dc5d81a8ba8273 147 Gene3D G3DSA:1.10.1510.10 1 90 2.8E-35 T 25-04-2016 SMD_RS02100 c227dc17ee5a958937dc5d81a8ba8273 147 SUPERFAMILY SSF89095 1 146 4.66E-45 T 25-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SMD_RS02100 c227dc17ee5a958937dc5d81a8ba8273 147 PANTHER PTHR28055:SF1 1 147 1.3E-53 T 25-04-2016 SMD_RS08620 a914899820bb72ff6b5760356ce7af2b 67 SUPERFAMILY SSF47413 19 59 5.18E-6 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS08620 a914899820bb72ff6b5760356ce7af2b 67 Gene3D G3DSA:1.10.260.40 16 51 2.3E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Gene3D G3DSA:3.40.50.1000 461 501 3.8E-42 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Gene3D G3DSA:3.40.50.1000 615 755 3.8E-42 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Pfam PF00403 Heavy-metal-associated domain 101 158 5.7E-6 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Pfam PF00403 Heavy-metal-associated domain 27 82 3.6E-6 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF55008 97 160 6.15E-11 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00941 Cadmium-transporting ATPase signature 372 386 2.3E-15 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00941 Cadmium-transporting ATPase signature 271 291 2.3E-15 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00941 Cadmium-transporting ATPase signature 27 36 2.3E-15 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00941 Cadmium-transporting ATPase signature 353 369 2.3E-15 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00941 Cadmium-transporting ATPase signature 217 229 2.3E-15 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF81653 290 387 1.44E-21 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Pfam PF00702 haloacid dehalogenase-like hydrolase 486 700 3.0E-38 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 237 791 1.0E-142 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 490 496 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 789 6.9E-171 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PANTHER PTHR24093:SF317 22 791 8.4E-255 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Gene3D G3DSA:2.70.150.10 236 388 5.4E-24 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Gene3D G3DSA:3.30.70.100 25 90 1.0E-8 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Gene3D G3DSA:3.30.70.100 98 162 3.3E-9 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF55008 19 90 2.49E-11 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Pfam PF00122 E1-E2 ATPase 257 479 4.7E-66 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PANTHER PTHR24093 22 791 8.4E-255 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF56784 545 786 1.3E-52 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF56784 487 506 1.3E-52 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF81665 236 290 2.09E-15 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 SUPERFAMILY SSF81665 388 479 2.09E-15 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 259 766 9.1E-72 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 488 502 5.0E-23 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 722 5.0E-23 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 644 5.0E-23 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 686 705 5.0E-23 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 5.0E-23 T 25-04-2016 SMD_RS11240 6e488f5737ccac91ad9122db54127b28 798 Gene3D G3DSA:3.40.1110.10 502 614 8.4E-16 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 PANTHER PTHR11953 5 239 3.9E-78 T 25-04-2016 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 SUPERFAMILY SSF55666 156 239 4.71E-24 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 PANTHER PTHR11953:SF0 5 239 3.9E-78 T 25-04-2016 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 25-04-2016 IPR018336 Ribonuclease PH, conserved site SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 3.6E-115 T 25-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 SUPERFAMILY SSF54211 3 184 3.29E-46 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 Hamap MF_00564 Ribonuclease PH [rph]. 4 240 49.572 T 25-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 1.3E-21 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 Gene3D G3DSA:3.30.230.70 8 240 6.8E-30 T 25-04-2016 IPR027408 PNPase/RNase PH domain SMD_RS17935 45dfa28e3c8d1cb699470591096ae2ab 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 227 8.3E-9 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 PANTHER PTHR30429 1 264 3.4E-143 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 PIRSF PIRSF002854 1 264 5.5E-103 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 SUPERFAMILY SSF53850 28 264 1.72E-83 T 25-04-2016 SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 Gene3D G3DSA:3.40.190.10 27 156 1.8E-52 T 25-04-2016 SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 10 262 1.3E-71 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 Pfam PF03180 NLPA lipoprotein 29 264 1.5E-98 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMD_RS19215 61f22ba3b6247999633d3b211e00b290 264 PANTHER PTHR30429:SF0 1 264 3.4E-143 T 25-04-2016 SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 SUPERFAMILY SSF52540 4 267 2.02E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 Gene3D G3DSA:3.40.50.300 3 247 3.2E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 213 2.2E-30 T 25-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 PIRSF PIRSF003092 1 269 1.9E-90 T 25-04-2016 IPR025501 ATP binding protein MinD SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 PANTHER PTHR13696 2 257 4.1E-89 T 25-04-2016 SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 PANTHER PTHR13696:SF1 2 257 4.1E-89 T 25-04-2016 SMD_RS06115 5e0e3b470c6eb8b9a188bfce310c58bd 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 3.3E-110 T 25-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 SMD_RS10450 631c0cacf9d850f116d352c108393228 130 Pfam PF14534 Domain of unknown function (DUF4440) 15 116 7.8E-8 T 25-04-2016 IPR027843 Domain of unknown function DUF4440 SMD_RS10450 631c0cacf9d850f116d352c108393228 130 Gene3D G3DSA:3.10.450.50 11 117 1.1E-15 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS10450 631c0cacf9d850f116d352c108393228 130 SUPERFAMILY SSF54427 11 117 2.25E-12 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Pfam PF13538 UvrD-like helicase C-terminal domain 533 579 1.0E-12 T 25-04-2016 IPR027785 UvrD-like helicase C-terminal domain SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 PANTHER PTHR10887 153 334 9.9E-60 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 PANTHER PTHR10887 533 587 9.9E-60 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 PANTHER PTHR10887 353 476 9.9E-60 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Gene3D G3DSA:3.40.50.300 423 469 3.2E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Gene3D G3DSA:3.40.50.300 363 389 3.2E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Gene3D G3DSA:3.40.50.300 521 591 3.2E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Gene3D G3DSA:3.40.50.300 305 318 3.2E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Pfam PF13604 AAA domain 154 326 8.5E-30 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 SUPERFAMILY SSF52540 4 369 2.9E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Gene3D G3DSA:3.40.50.300 154 304 2.5E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 4 604 7.9E-173 T 25-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 SUPERFAMILY SSF52540 439 603 2.73E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 SUPERFAMILY SSF52540 356 387 2.73E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 SUPERFAMILY SSF52540 289 329 2.73E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 PANTHER PTHR10887:SF284 153 334 9.9E-60 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 PANTHER PTHR10887:SF284 533 587 9.9E-60 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 PANTHER PTHR10887:SF284 353 476 9.9E-60 T 25-04-2016 SMD_RS21830 1e84b50d1d444232aecdcfa1af2e079b 626 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 12 604 48.011 T 25-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 SUPERFAMILY SSF52540 326 514 2.57E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 PANTHER PTHR11564:SF3 223 527 2.0E-68 T 25-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 SMART SM00382 328 522 2.2E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 SMART SM00962 329 520 7.5E-51 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 Gene3D G3DSA:3.40.50.300 329 518 2.4E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 Pfam PF00448 SRP54-type protein, GTPase domain 331 518 6.5E-37 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 216 417 6.6E-54 T 25-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SMD_RS10765 7b4d5d31fc9644163d41b62380b6029b 538 PANTHER PTHR11564 223 527 2.0E-68 T 25-04-2016 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 418 9.6E-186 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 263 377 3.8E-39 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 PANTHER PTHR11712 2 419 5.8E-206 T 25-04-2016 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 163 179 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 Gene3D G3DSA:3.40.47.10 2 265 1.3E-72 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 PIRSF PIRSF000447 1 420 1.1E-173 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 SUPERFAMILY SSF53901 223 419 1.22E-73 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 SMART SM00825 Beta-ketoacyl synthase 5 420 1.5E-14 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 Gene3D G3DSA:3.40.47.10 271 419 1.0E-64 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 255 1.0E-55 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMD_RS05175 94ff6ea8cad426b412a265b2916b1de2 420 SUPERFAMILY SSF53901 2 260 1.39E-69 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 SMART SM00758 452 601 1.3E-33 T 25-04-2016 IPR011658 PA14 domain SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 243 261 9.5E-9 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 77 96 9.5E-9 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 172 188 9.5E-9 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Gene3D G3DSA:3.20.20.300 15 332 3.2E-109 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Pfam PF14310 Fibronectin type III-like domain 788 859 9.7E-22 T 25-04-2016 IPR026891 Fibronectin type III-like domain SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 38 320 1.8E-50 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 SUPERFAMILY SSF52279 361 428 1.16E-52 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 SUPERFAMILY SSF52279 600 754 1.16E-52 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 SUPERFAMILY SSF51445 15 360 3.16E-95 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Gene3D G3DSA:3.40.50.1700 347 429 6.1E-73 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Gene3D G3DSA:3.40.50.1700 600 754 6.1E-73 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 SMART SM01217 788 859 1.0E-28 T 25-04-2016 IPR026891 Fibronectin type III-like domain SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PANTHER PTHR30620 586 873 8.4E-302 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PANTHER PTHR30620 15 422 8.4E-302 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 361 751 4.8E-60 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PANTHER PTHR30620:SF8 15 422 8.4E-302 T 25-04-2016 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 SUPERFAMILY SSF56988 453 628 2.62E-46 T 25-04-2016 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 PANTHER PTHR30620:SF8 586 873 8.4E-302 T 25-04-2016 SMD_RS11730 291c347f7d6dd8e27770c6da33ba20b4 875 Pfam PF07691 PA14 domain 454 599 1.3E-31 T 25-04-2016 IPR011658 PA14 domain SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 Gene3D G3DSA:2.40.33.10 77 171 4.0E-27 T 25-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 SUPERFAMILY SSF50800 74 171 5.93E-24 T 25-04-2016 IPR011037 Pyruvate kinase-like, insert domain SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 Gene3D G3DSA:3.20.20.60 6 76 2.8E-91 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 Gene3D G3DSA:3.20.20.60 172 328 2.8E-91 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PANTHER PTHR11817 3 479 1.2E-271 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 SUPERFAMILY SSF51621 171 342 1.74E-88 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 SUPERFAMILY SSF51621 4 79 1.74E-88 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 Gene3D G3DSA:3.40.1380.20 329 473 2.9E-38 T 25-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PANTHER PTHR11817:SF17 3 479 1.2E-271 T 25-04-2016 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 SUPERFAMILY SSF52935 326 476 2.62E-34 T 25-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 1.7E-56 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 1.6E-26 T 25-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 4.0E-156 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 1.1E-119 T 25-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17655 d74e03c3d65395acf155fa2920e1cfd6 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 25-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 SMART SM00382 39 227 3.3E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 SUPERFAMILY SSF52540 11 237 5.44E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 Gene3D G3DSA:3.40.50.300 10 238 2.3E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 Pfam PF00005 ABC transporter 30 179 3.5E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 PANTHER PTHR24220 12 239 1.2E-83 T 25-04-2016 SMD_RS08285 ba6245ced88715565099bdaa00eaf6e5 242 PANTHER PTHR24220:SF578 12 239 1.2E-83 T 25-04-2016 SMD_RS02730 f18f10cf56c2fc6ca71c983abae3974f 212 Pfam PF13460 NAD(P)H-binding 7 194 4.4E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02730 f18f10cf56c2fc6ca71c983abae3974f 212 Gene3D G3DSA:3.40.50.720 1 209 2.3E-37 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02730 f18f10cf56c2fc6ca71c983abae3974f 212 PANTHER PTHR15020 1 212 2.2E-50 T 25-04-2016 SMD_RS02730 f18f10cf56c2fc6ca71c983abae3974f 212 PANTHER PTHR15020:SF29 1 212 2.2E-50 T 25-04-2016 SMD_RS02730 f18f10cf56c2fc6ca71c983abae3974f 212 SUPERFAMILY SSF51735 1 208 2.76E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05700 db4afb352373cb5bb8a018d9e6040d3e 132 Gene3D G3DSA:4.10.520.10 35 130 1.5E-15 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS05700 db4afb352373cb5bb8a018d9e6040d3e 132 SUPERFAMILY SSF47729 35 130 7.8E-14 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS05700 db4afb352373cb5bb8a018d9e6040d3e 132 SMART SM00411 35 132 2.9E-10 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS05700 db4afb352373cb5bb8a018d9e6040d3e 132 PANTHER PTHR33175:SF1 35 130 2.4E-32 T 25-04-2016 SMD_RS05700 db4afb352373cb5bb8a018d9e6040d3e 132 PANTHER PTHR33175 35 130 2.4E-32 T 25-04-2016 SMD_RS05700 db4afb352373cb5bb8a018d9e6040d3e 132 Pfam PF00216 Bacterial DNA-binding protein 35 130 6.3E-16 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 PANTHER PTHR30154 1 154 1.3E-62 T 25-04-2016 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 Gene3D G3DSA:3.30.70.920 58 154 2.3E-29 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 9.2E-21 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 PANTHER PTHR30154:SF28 1 154 1.3E-62 T 25-04-2016 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 SUPERFAMILY SSF46785 3 64 2.65E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 3.6E-17 T 25-04-2016 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 Gene3D G3DSA:1.10.10.10 1 56 1.6E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 SMART SM00344 5 114 1.4E-39 T 25-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 8.0E-17 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 8.0E-17 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 8.0E-17 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS12665 adfd01e7b64828623579d8bd50d1abad 154 SUPERFAMILY SSF54909 67 154 4.83E-21 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS06035 3b588a2121025113552ca8472d580b71 302 SUPERFAMILY SSF52096 10 202 5.31E-36 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS06035 3b588a2121025113552ca8472d580b71 302 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 8 277 2.2E-115 T 25-04-2016 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 SMD_RS06035 3b588a2121025113552ca8472d580b71 302 Pfam PF01039 Carboxyl transferase domain 14 194 2.0E-17 T 25-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06035 3b588a2121025113552ca8472d580b71 302 PANTHER PTHR22855:SF21 1 226 4.1E-85 T 25-04-2016 SMD_RS06035 3b588a2121025113552ca8472d580b71 302 Gene3D G3DSA:3.90.226.10 12 189 3.4E-33 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS06035 3b588a2121025113552ca8472d580b71 302 PANTHER PTHR22855 1 226 4.1E-85 T 25-04-2016 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 PIRSF PIRSF000813 1 406 6.7E-187 T 25-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 1.4E-12 T 25-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 Gene3D G3DSA:3.30.460.10 1 122 7.6E-33 T 25-04-2016 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 Pfam PF01743 Poly A polymerase head domain 3 123 1.4E-20 T 25-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 SUPERFAMILY SSF81891 121 402 1.57E-51 T 25-04-2016 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 SUPERFAMILY SSF81301 1 120 3.92E-30 T 25-04-2016 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 Pfam PF01966 HD domain 231 314 3.8E-5 T 25-04-2016 IPR006674 HD domain SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 50.077 T 25-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 Gene3D G3DSA:1.10.3090.10 123 362 1.7E-51 T 25-04-2016 SMD_RS18675 c9110593cfdaf7ef055e8661367ff744 406 PANTHER PTHR13734 1 236 1.2E-71 T 25-04-2016 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 Gene3D G3DSA:3.40.250.10 115 217 5.6E-23 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 ProSitePatterns PS00380 Rhodanese signature 1. 144 155 - T 25-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 SUPERFAMILY SSF52821 122 217 5.76E-27 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 5.3E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 5.3E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 5.3E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 SMART SM00450 119 215 3.2E-18 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 SMART SM00418 17 95 1.1E-23 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 Pfam PF00581 Rhodanese-like domain 123 212 6.4E-12 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 Gene3D G3DSA:1.10.10.10 3 101 1.8E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 PANTHER PTHR33154 3 107 1.1E-21 T 25-04-2016 SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 SUPERFAMILY SSF46785 11 115 2.73E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10065 ed156f37eba29dd834fe46f3984b7185 221 Pfam PF12840 Helix-turn-helix domain 16 75 5.5E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 9.4E-28 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 9.4E-28 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.4E-28 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.4E-28 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 9.4E-28 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PANTHER PTHR11404 1 208 4.6E-103 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 SUPERFAMILY SSF46609 1 89 1.09E-35 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 Gene3D G3DSA:1.10.287.990 20 89 2.9E-30 T 25-04-2016 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 SUPERFAMILY SSF54719 93 206 3.4E-42 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 25-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 PIRSF PIRSF000349 1 209 9.7E-77 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 202 1.3E-37 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS12975 40599a9d73f40b24733228822c81234f 209 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.1E-32 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 Gene3D G3DSA:3.40.190.10 95 191 5.1E-24 T 25-04-2016 SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 Gene3D G3DSA:1.10.10.10 4 89 8.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 Pfam PF03466 LysR substrate binding domain 89 299 3.1E-40 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 PANTHER PTHR30537:SF5 1 316 8.7E-123 T 25-04-2016 SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 PANTHER PTHR30537 1 316 8.7E-123 T 25-04-2016 SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.7E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 SUPERFAMILY SSF46785 3 113 2.92E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09300 648d7dafc481ec832a0e1a2ac055d04b 343 SUPERFAMILY SSF53850 89 300 9.05E-42 T 25-04-2016 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Gene3D G3DSA:3.40.50.300 199 337 5.0E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 PANTHER PTHR13710:SF81 6 599 1.5E-287 T 25-04-2016 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SMART SM00956 405 508 5.7E-55 T 25-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Pfam PF00270 DEAD/DEAH box helicase 23 178 1.2E-17 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 457 1.1E-157 T 25-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Pfam PF00570 HRDC domain 530 597 6.9E-22 T 25-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 599 4.6E-263 T 25-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SMART SM00341 527 600 5.7E-12 T 25-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SMART SM00490 243 324 9.4E-24 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Pfam PF00271 Helicase conserved C-terminal domain 218 324 2.5E-14 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Gene3D G3DSA:3.40.50.300 6 198 3.0E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SUPERFAMILY SSF52540 201 451 1.59E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SUPERFAMILY SSF47819 528 599 3.05E-22 T 25-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SMART SM00487 15 211 2.6E-28 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 PANTHER PTHR13710 6 599 1.5E-287 T 25-04-2016 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Gene3D G3DSA:1.10.10.10 338 510 4.6E-62 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Pfam PF16124 RecQ zinc-binding 336 398 2.4E-19 T 25-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Pfam PF09382 RQC domain 400 511 5.3E-42 T 25-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 SUPERFAMILY SSF52540 6 190 6.09E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16850 d5f9f6c47aae1745b36fc115f7ee7ba4 601 Gene3D G3DSA:1.10.150.80 530 598 4.5E-18 T 25-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 Gene3D G3DSA:1.10.10.10 122 224 1.4E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-38 T 25-04-2016 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 SMART SM00862 146 221 5.2E-27 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 PANTHER PTHR26402 1 222 4.4E-107 T 25-04-2016 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 SUPERFAMILY SSF52172 1 118 3.98E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 8.6E-27 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 Pfam PF00072 Response regulator receiver domain 4 113 4.1E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 PANTHER PTHR26402:SF575 1 222 4.4E-107 T 25-04-2016 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 SUPERFAMILY SSF46894 122 222 3.12E-31 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.7E-104 T 25-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 SMD_RS07805 c4e38b7500d248a99e22d2a762c842bf 230 SMART SM00448 1 112 1.6E-38 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 901 918 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 918 1.7E-216 T 25-04-2016 IPR010104 Bacterial TonB-dependent receptor SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552:SF16 6 239 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552:SF16 465 595 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552:SF16 269 370 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552:SF16 733 918 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552:SF16 614 711 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 SUPERFAMILY SSF56935 272 492 2.88E-78 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 SUPERFAMILY SSF56935 35 235 2.88E-78 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 SUPERFAMILY SSF56935 740 918 2.88E-78 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 SUPERFAMILY SSF56935 532 713 2.88E-78 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552 6 239 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552 465 595 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552 269 370 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552 733 918 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 PANTHER PTHR32552 614 711 9.1E-45 T 25-04-2016 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 Gene3D G3DSA:2.170.130.10 44 164 1.8E-17 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 162 6.9E-15 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 Gene3D G3DSA:2.40.170.20 538 918 1.9E-48 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 Gene3D G3DSA:2.40.170.20 165 231 1.9E-48 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 Gene3D G3DSA:2.40.170.20 268 391 1.9E-48 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05765 200ca4dd314d66eabeb96716fda1b456 918 Gene3D G3DSA:2.40.170.20 437 504 1.9E-48 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 5.0E-99 T 25-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 PANTHER PTHR30305 1 316 8.5E-119 T 25-04-2016 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 2.3E-24 T 25-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 Pfam PF07475 HPr Serine kinase C-terminal domain 135 306 1.1E-56 T 25-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 SUPERFAMILY SSF53795 137 306 5.49E-33 T 25-04-2016 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 PANTHER PTHR30305:SF1 1 316 8.5E-119 T 25-04-2016 SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 Gene3D G3DSA:3.40.50.300 138 313 3.6E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 SUPERFAMILY SSF75138 10 136 1.02E-28 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 Gene3D G3DSA:3.40.1390.20 10 135 7.9E-28 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMD_RS05430 293bf0453c3bc3c52bb02ceb33f75111 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.711 T 25-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 SUPERFAMILY SSF82784 1 138 2.22E-45 T 25-04-2016 IPR003718 OsmC/Ohr family SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 PANTHER PTHR33797 1 140 8.9E-71 T 25-04-2016 SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 Gene3D G3DSA:2.20.25.10 1 47 2.0E-24 T 25-04-2016 SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 Pfam PF02566 OsmC-like protein 44 138 4.4E-17 T 25-04-2016 IPR003718 OsmC/Ohr family SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 Gene3D G3DSA:3.30.300.20 48 140 1.5E-36 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 PANTHER PTHR33797:SF2 1 140 8.9E-71 T 25-04-2016 SMD_RS01375 f2af39c565434e36cbc37c71d5fdf4c3 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 2.1E-55 T 25-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 SMD_RS12260 a92482ee91b91ee103a6cf2ae050377f 144 SUPERFAMILY SSF103481 43 142 5.75E-17 T 25-04-2016 SMD_RS12260 a92482ee91b91ee103a6cf2ae050377f 144 Pfam PF00892 EamA-like transporter family 8 141 1.4E-22 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS12260 a92482ee91b91ee103a6cf2ae050377f 144 PANTHER PTHR22911 2 141 8.3E-22 T 25-04-2016 SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 Pfam PF00563 EAL domain 146 379 1.8E-56 T 25-04-2016 IPR001633 EAL domain SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 SUPERFAMILY SSF141868 146 391 4.18E-63 T 25-04-2016 IPR001633 EAL domain SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 SMART SM00448 3 123 1.3E-10 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 SMART SM00052 137 385 8.2E-51 T 25-04-2016 IPR001633 EAL domain SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 PANTHER PTHR33121 145 402 3.8E-48 T 25-04-2016 SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 Gene3D G3DSA:3.40.50.2300 2 126 8.8E-20 T 25-04-2016 SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 SUPERFAMILY SSF52172 4 128 1.28E-19 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 Pfam PF00072 Response regulator receiver domain 5 116 5.8E-14 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 PANTHER PTHR33121:SF13 145 402 3.8E-48 T 25-04-2016 SMD_RS04055 ce21378052a41eabb20ba8ddd2a157cf 406 Gene3D G3DSA:3.20.20.450 146 392 1.2E-66 T 25-04-2016 IPR001633 EAL domain SMD_RS11335 cc83e05216cf90778c4e974b42972915 224 SUPERFAMILY SSF51182 102 208 6.24E-12 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS11335 cc83e05216cf90778c4e974b42972915 224 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 224 4.3E-47 T 25-04-2016 IPR012807 Anti-sigma factor ChrR, putative SMD_RS11335 cc83e05216cf90778c4e974b42972915 224 Gene3D G3DSA:2.60.120.10 126 209 1.5E-9 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS11335 cc83e05216cf90778c4e974b42972915 224 Pfam PF12973 ChrR Cupin-like domain 131 200 6.2E-8 T 25-04-2016 IPR025979 ChrR-like cupin domain SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 Gene3D G3DSA:3.30.70.260 30 94 1.8E-11 T 25-04-2016 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 SUPERFAMILY SSF55021 97 185 7.4E-19 T 25-04-2016 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 Gene3D G3DSA:3.30.70.260 99 185 4.6E-20 T 25-04-2016 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 PIRSF PIRSF028103 11 186 2.9E-71 T 25-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 PANTHER PTHR34875:SF3 1 186 1.9E-76 T 25-04-2016 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 Pfam PF13740 ACT domain 14 87 2.0E-14 T 25-04-2016 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 PANTHER PTHR34875 1 186 1.9E-76 T 25-04-2016 SMD_RS09030 514ee5eff02a1f3b93053d516bfc8927 186 SUPERFAMILY SSF55021 11 91 1.42E-9 T 25-04-2016 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 Gene3D G3DSA:3.40.50.1010 9 187 4.2E-49 T 25-04-2016 IPR029060 PIN domain-like SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 SUPERFAMILY SSF88723 8 163 7.61E-41 T 25-04-2016 IPR029060 PIN domain-like SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 PANTHER PTHR10133 10 291 7.7E-134 T 25-04-2016 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 173 263 1.5E-23 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 PANTHER PTHR10133:SF37 10 291 7.7E-134 T 25-04-2016 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 Gene3D G3DSA:1.10.150.20 188 254 9.7E-23 T 25-04-2016 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 10 170 3.3E-40 T 25-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 SMART SM00475 5 270 2.2E-74 T 25-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 SUPERFAMILY SSF47807 173 292 3.74E-23 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMD_RS03890 67bd14f25ca38f61c3717e2aed7ef0f4 311 SMART SM00279 175 210 6.0E-10 T 25-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 PANTHER PTHR10992 170 228 3.3E-39 T 25-04-2016 SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 PANTHER PTHR10992 5 153 3.3E-39 T 25-04-2016 SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 Gene3D G3DSA:3.40.50.1820 4 225 1.7E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 Pfam PF12697 Alpha/beta hydrolase family 7 220 1.5E-16 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 SUPERFAMILY SSF53474 2 224 1.16E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 PANTHER PTHR10992:SF832 170 228 3.3E-39 T 25-04-2016 SMD_RS08970 5c1967a8f5d87fb1747d3d1a1f0c6750 231 PANTHER PTHR10992:SF832 5 153 3.3E-39 T 25-04-2016 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 PANTHER PTHR33695 1 172 3.3E-59 T 25-04-2016 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 TIGRFAM TIGR00077 lspA: signal peptidase II 11 166 1.2E-41 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 Pfam PF01252 Signal peptidase (SPase) II 18 158 1.8E-35 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 1.2E-16 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 1.2E-16 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 1.2E-16 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 164 16.241 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS06270 b2d76809c7e5fa9394fbe38a8da32584 174 PANTHER PTHR33695:SF1 1 172 3.3E-59 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 1.0E-18 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 25-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Gene3D G3DSA:3.40.50.740 287 420 2.1E-28 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Gene3D G3DSA:3.40.50.740 496 631 2.1E-28 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 SUPERFAMILY SSF54862 89 223 4.18E-37 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Gene3D G3DSA:3.10.20.30 14 68 1.2E-5 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Pfam PF01568 Molydopterin dinucleotide binding domain 658 730 2.4E-10 T 25-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 6.5E-16 T 25-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 SMART SM00929 96 136 2.5E-19 T 25-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 PANTHER PTHR11615:SF38 16 337 8.9E-163 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 PANTHER PTHR11615:SF38 354 642 8.9E-163 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 6.4E-205 T 25-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Pfam PF00384 Molybdopterin oxidoreductase 521 608 1.2E-8 T 25-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Pfam PF00384 Molybdopterin oxidoreductase 287 415 6.6E-16 T 25-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 SUPERFAMILY SSF54292 15 86 2.98E-19 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 SUPERFAMILY SSF53706 226 632 7.85E-78 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 SUPERFAMILY SSF50692 675 735 3.62E-11 T 25-04-2016 IPR009010 Aspartate decarboxylase-like domain SMD_RS15450 ddc50895244cb90173c21526d8921134 744 PANTHER PTHR11615 16 337 8.9E-163 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 PANTHER PTHR11615 354 642 8.9E-163 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 Gene3D G3DSA:2.40.40.20 648 731 2.5E-9 T 25-04-2016 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 25-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SMD_RS15450 ddc50895244cb90173c21526d8921134 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 25-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 296 3.9E-53 T 25-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 SUPERFAMILY SSF55021 336 412 2.68E-17 T 25-04-2016 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 PANTHER PTHR10996 4 371 7.8E-229 T 25-04-2016 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 Gene3D G3DSA:3.40.50.720 11 121 1.3E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 1.5E-36 T 25-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 Pfam PF01842 ACT domain 348 404 3.3E-8 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 Gene3D G3DSA:3.30.70.260 326 412 3.7E-27 T 25-04-2016 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 SUPERFAMILY SSF52283 10 137 8.29E-47 T 25-04-2016 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 PANTHER PTHR10996:SF18 4 371 7.8E-229 T 25-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 Gene3D G3DSA:3.40.50.720 122 299 6.8E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 25-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 SUPERFAMILY SSF51735 110 297 3.1E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10410 01f04132c7bef6ea01c5b943f28a9f3e 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 25-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SMD_RS20705 78ba2a7ec9f175c991ae1add46ec8117 466 PANTHER PTHR30373:SF2 1 298 8.3E-62 T 25-04-2016 SMD_RS20705 78ba2a7ec9f175c991ae1add46ec8117 466 PANTHER PTHR30373:SF2 398 466 8.3E-62 T 25-04-2016 SMD_RS20705 78ba2a7ec9f175c991ae1add46ec8117 466 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 38 160 1.5E-35 T 25-04-2016 IPR007621 TPM domain SMD_RS20705 78ba2a7ec9f175c991ae1add46ec8117 466 SUPERFAMILY SSF103473 182 420 2.62E-5 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS20705 78ba2a7ec9f175c991ae1add46ec8117 466 PANTHER PTHR30373 1 298 8.3E-62 T 25-04-2016 SMD_RS20705 78ba2a7ec9f175c991ae1add46ec8117 466 PANTHER PTHR30373 398 466 8.3E-62 T 25-04-2016 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 SMART SM01003 6 139 8.3E-44 T 25-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 PANTHER PTHR10160 8 346 2.0E-139 T 25-04-2016 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 Gene3D G3DSA:3.50.50.60 175 198 7.9E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 25-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 SMART SM01002 148 310 5.9E-77 T 25-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 PANTHER PTHR10160:SF19 8 346 2.0E-139 T 25-04-2016 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 SUPERFAMILY SSF52283 9 170 1.96E-40 T 25-04-2016 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 Gene3D G3DSA:3.40.50.1770 199 352 3.2E-27 T 25-04-2016 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 SUPERFAMILY SSF51735 139 309 4.04E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 Gene3D G3DSA:3.40.50.1770 8 174 7.1E-51 T 25-04-2016 SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 9 139 3.8E-34 T 25-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SMD_RS03905 afddcb1e293c520e10207046b49e4525 359 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 354 1.8E-62 T 25-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SMD_RS01610 dc83b5d2aff293998acf3038ff2074d4 73 PANTHER PTHR34977 1 69 1.3E-14 T 25-04-2016 SMD_RS01610 dc83b5d2aff293998acf3038ff2074d4 73 PIRSF PIRSF039008 1 66 3.9E-30 T 25-04-2016 IPR026042 Stress response protein YjbJ SMD_RS01610 dc83b5d2aff293998acf3038ff2074d4 73 Gene3D G3DSA:1.10.1470.10 1 64 4.9E-27 T 25-04-2016 IPR008462 CsbD-like SMD_RS01610 dc83b5d2aff293998acf3038ff2074d4 73 Pfam PF05532 CsbD-like 4 56 2.2E-20 T 25-04-2016 IPR008462 CsbD-like SMD_RS01610 dc83b5d2aff293998acf3038ff2074d4 73 SUPERFAMILY SSF69047 1 66 9.55E-25 T 25-04-2016 IPR008462 CsbD-like SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 5.3E-161 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 402 7.0E-34 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PANTHER PTHR11778:SF0 1 425 1.2E-199 T 25-04-2016 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 39.276 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 Gene3D G3DSA:3.30.930.10 106 423 1.1E-140 T 25-04-2016 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PANTHER PTHR11778 1 425 1.2E-199 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 Gene3D G3DSA:1.10.287.40 1 105 1.0E-22 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.8E-28 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 SUPERFAMILY SSF46589 1 113 6.28E-25 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 SUPERFAMILY SSF55681 117 422 5.56E-100 T 25-04-2016 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 7.2E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 7.2E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 7.2E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 7.2E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 7.2E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS13985 9c41a30ee0bb08139eeda25f926bb977 426 PIRSF PIRSF001529 1 426 1.2E-167 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 SUPERFAMILY SSF51126 144 413 2.32E-36 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 SUPERFAMILY SSF51126 472 496 2.32E-36 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 SMART SM00912 134 249 7.2E-24 T 25-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 PANTHER PTHR12338 83 276 0.0 T 25-04-2016 SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 PANTHER PTHR12338 292 3881 0.0 T 25-04-2016 SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 Gene3D G3DSA:2.160.10.10 2751 2842 8.9E-4 T 25-04-2016 SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 Pfam PF05860 haemagglutination activity domain 153 249 1.6E-17 T 25-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 170 245 2.1E-19 T 25-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 Gene3D G3DSA:2.160.20.10 151 399 1.9E-11 T 25-04-2016 IPR012334 Pectin lyase fold SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 Gene3D G3DSA:2.160.20.10 471 487 1.9E-11 T 25-04-2016 IPR012334 Pectin lyase fold SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3928 4038 9.5E-41 T 25-04-2016 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 PANTHER PTHR12338:SF6 83 276 0.0 T 25-04-2016 SMD_RS12595 f6390c896615f8964a2f67c07a45ff01 4127 PANTHER PTHR12338:SF6 292 3881 0.0 T 25-04-2016 SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 SUPERFAMILY SSF52540 90 250 6.42E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 SUPERFAMILY SSF52540 279 418 6.42E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 Gene3D G3DSA:3.40.50.300 307 432 1.1E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 SMART SM00490 324 412 6.3E-16 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 PANTHER PTHR24031:SF122 51 597 1.7E-146 T 25-04-2016 SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 Pfam PF00271 Helicase conserved C-terminal domain 307 411 7.2E-14 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 Gene3D G3DSA:3.40.50.300 62 263 3.1E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 Pfam PF00270 DEAD/DEAH box helicase 80 248 6.2E-28 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 Pfam PF09369 Domain of unknown function (DUF1998) 676 780 3.5E-12 T 25-04-2016 IPR018973 DEAD/DEAH-box helicase, putative SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 PANTHER PTHR24031 51 597 1.7E-146 T 25-04-2016 SMD_RS00520 0850d99f8d4597dd206cc89c33fc8d29 829 SMART SM00487 74 278 4.6E-30 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS12555 b7846b940f1a162dc0e19cc14465580d 137 PANTHER PTHR30558:SF10 16 137 4.8E-37 T 25-04-2016 SMD_RS12555 b7846b940f1a162dc0e19cc14465580d 137 PANTHER PTHR30558 16 137 4.8E-37 T 25-04-2016 SMD_RS12555 b7846b940f1a162dc0e19cc14465580d 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 2.5E-27 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS19755 cbf1d658e63c97ec050f890742cf2d7c 91 Pfam PF01541 GIY-YIG catalytic domain 8 77 2.0E-13 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMD_RS19755 cbf1d658e63c97ec050f890742cf2d7c 91 SUPERFAMILY SSF82771 8 78 1.57E-10 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMD_RS19755 cbf1d658e63c97ec050f890742cf2d7c 91 PANTHER PTHR34477 1 87 9.8E-36 T 25-04-2016 SMD_RS19755 cbf1d658e63c97ec050f890742cf2d7c 91 PANTHER PTHR34477:SF1 1 87 9.8E-36 T 25-04-2016 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 Pfam PF01103 Surface antigen 454 787 3.8E-90 T 25-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 PIRSF PIRSF006076 2 787 1.5E-254 T 25-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 787 1.2E-245 T 25-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 Pfam PF07244 Surface antigen variable number repeat 99 178 5.0E-12 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 Pfam PF07244 Surface antigen variable number repeat 354 426 3.5E-14 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 Pfam PF07244 Surface antigen variable number repeat 272 350 3.7E-11 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 Pfam PF07244 Surface antigen variable number repeat 182 269 8.8E-13 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 787 25.335 T 25-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 PANTHER PTHR12815:SF11 11 787 7.0E-249 T 25-04-2016 SMD_RS06975 f26dd3759425fd2d7bd57e5057b1724b 787 PANTHER PTHR12815 11 787 7.0E-249 T 25-04-2016 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 PANTHER PTHR30173 7 169 4.4E-23 T 25-04-2016 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 Pfam PF04542 Sigma-70 region 2 15 76 5.5E-11 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 Gene3D G3DSA:1.10.10.10 103 166 4.1E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 SUPERFAMILY SSF88659 98 165 3.49E-10 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 Gene3D G3DSA:1.10.1740.10 7 76 5.5E-11 T 25-04-2016 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 Pfam PF08281 Sigma-70, region 4 110 161 7.8E-9 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 165 1.8E-19 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS08920 20b5d247e7b0cde29dbbd9fdc74a7dd7 171 SUPERFAMILY SSF88946 7 92 2.51E-13 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 PRINTS PR01374 Gram-negative bacterial tonB protein signature 297 314 2.3E-11 T 25-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 PRINTS PR01374 Gram-negative bacterial tonB protein signature 257 278 2.3E-11 T 25-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 PRINTS PR01374 Gram-negative bacterial tonB protein signature 278 296 2.3E-11 T 25-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 261 328 1.2E-18 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 263 332 6.5E-20 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 PANTHER PTHR33446 10 332 6.3E-74 T 25-04-2016 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 PANTHER PTHR33446:SF1 10 332 6.3E-74 T 25-04-2016 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 Gene3D G3DSA:3.30.1150.10 224 335 5.1E-20 T 25-04-2016 SMD_RS21050 533687b221fd2f160f0e9fbb7899ce5f 337 SUPERFAMILY SSF74653 255 320 1.83E-21 T 25-04-2016 SMD_RS07845 745048534dbc0601d8b980050a8dccd8 409 PANTHER PTHR33567:SF3 5 405 1.2E-119 T 25-04-2016 SMD_RS07845 745048534dbc0601d8b980050a8dccd8 409 Pfam PF02417 Chromate transporter 21 186 1.1E-32 T 25-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SMD_RS07845 745048534dbc0601d8b980050a8dccd8 409 Pfam PF02417 Chromate transporter 237 403 1.3E-29 T 25-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SMD_RS07845 745048534dbc0601d8b980050a8dccd8 409 PANTHER PTHR33567 5 405 1.2E-119 T 25-04-2016 SMD_RS07845 745048534dbc0601d8b980050a8dccd8 409 TIGRFAM TIGR00937 2A51: chromate efflux transporter 26 402 3.6E-101 T 25-04-2016 IPR014047 Chromate transporter, long chain SMD_RS07845 745048534dbc0601d8b980050a8dccd8 409 PIRSF PIRSF004810 2 408 1.4E-123 T 25-04-2016 IPR014047 Chromate transporter, long chain SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 276 4.4E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 Gene3D G3DSA:3.30.565.10 282 423 4.1E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 422 8.5E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 SMART SM00387 322 426 4.9E-13 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 PANTHER PTHR24423 44 83 8.4E-62 T 25-04-2016 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 PANTHER PTHR24423 152 422 8.4E-62 T 25-04-2016 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 SUPERFAMILY SSF47384 197 275 1.28E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 SUPERFAMILY SSF55874 281 424 8.51E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 SMART SM00388 213 279 2.6E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 PANTHER PTHR24423:SF474 44 83 8.4E-62 T 25-04-2016 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 PANTHER PTHR24423:SF474 152 422 8.4E-62 T 25-04-2016 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 Pfam PF00672 HAMP domain 139 206 2.3E-6 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS16305 1b3b6a75ecd607ace3b7d08f4c6196b9 428 Gene3D G3DSA:1.10.287.130 205 275 6.4E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 Pfam PF00633 Helix-hairpin-helix motif 116 144 5.5E-9 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 Gene3D G3DSA:1.10.340.30 40 139 2.3E-33 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 PANTHER PTHR10359:SF18 22 229 5.5E-90 T 25-04-2016 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 PANTHER PTHR10359 22 229 5.5E-90 T 25-04-2016 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 204 220 2.1E-4 T 25-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 ProSitePatterns PS01155 Endonuclease III family signature. 119 148 - T 25-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 SMART SM00478 55 202 1.4E-54 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 51 184 2.4E-16 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 PIRSF PIRSF001435 17 229 3.3E-49 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 TIGRFAM TIGR01083 nth: endonuclease III 22 211 3.4E-84 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 SUPERFAMILY SSF48150 20 226 1.73E-71 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 Hamap MF_00942 Endonuclease III [nth]. 3 226 36.902 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMD_RS07265 9fa75c1f8cad0e96a8cf11345d0887b7 230 Gene3D G3DSA:1.10.1670.10 140 225 6.3E-36 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 686 6.4E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 648 6.4E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 667 6.4E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Pfam PF00989 PAS fold 99 201 5.5E-11 T 25-04-2016 IPR013767 PAS fold GO:0006355 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SUPERFAMILY SSF55874 564 686 9.31E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Gene3D G3DSA:3.30.450.20 340 462 1.7E-15 T 25-04-2016 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Gene3D G3DSA:3.30.450.20 218 339 1.5E-10 T 25-04-2016 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 PANTHER PTHR24423 201 699 6.3E-37 T 25-04-2016 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 687 1.2E-6 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SUPERFAMILY SSF55785 339 463 1.34E-16 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SMART SM00091 354 419 4.1E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SMART SM00091 98 165 6.6E-11 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SMART SM00091 224 291 37.0 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SUPERFAMILY SSF55785 237 351 6.63E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 95 212 3.1E-14 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 350 473 3.2E-14 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Gene3D G3DSA:3.30.450.20 91 207 2.8E-16 T 25-04-2016 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Gene3D G3DSA:3.30.565.10 574 688 8.8E-10 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Pfam PF13426 PAS domain 364 465 7.2E-8 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 Pfam PF07730 Histidine kinase 494 559 4.4E-14 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SUPERFAMILY SSF55785 89 208 1.02E-16 T 25-04-2016 IPR000014 PAS domain SMD_RS11000 5b74e9b44ba79fc39ba552ae645e6ee0 700 SMART SM00387 597 689 5.9E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 3 293 6.9E-48 T 25-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 313 608 2.4E-39 T 25-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 PANTHER PTHR31645:SF0 410 610 1.3E-161 T 25-04-2016 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 PANTHER PTHR31645:SF0 8 391 1.3E-161 T 25-04-2016 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 Pfam PF03169 OPT oligopeptide transporter protein 9 611 7.5E-122 T 25-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 PANTHER PTHR31645 410 610 1.3E-161 T 25-04-2016 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 PANTHER PTHR31645 8 391 1.3E-161 T 25-04-2016 SMD_RS06090 5ae511c33c8f4bc00ba245d4498e9dda 654 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 1.9E-174 T 25-04-2016 IPR004814 Oligopeptide transporter OPT SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 Pfam PF12852 Cupin 3 156 5.2E-29 T 25-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 Pfam PF12833 Helix-turn-helix domain 193 270 1.5E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 PANTHER PTHR11019:SF77 40 277 1.4E-43 T 25-04-2016 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 PANTHER PTHR11019 40 277 1.4E-43 T 25-04-2016 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 SMART SM00342 187 269 5.1E-29 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 SUPERFAMILY SSF46689 170 221 4.93E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 Gene3D G3DSA:1.10.10.60 225 271 2.2E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 Gene3D G3DSA:1.10.10.60 168 224 6.4E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 SUPERFAMILY SSF51215 35 153 1.83E-5 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 172 216 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 SUPERFAMILY SSF46689 223 272 1.04E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS08605 b7af293be012ad5fa6cbd37b07e0c011 277 Gene3D G3DSA:2.60.120.280 37 153 2.3E-5 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 25-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 PIRSF PIRSF001423 1 554 5.2E-289 T 25-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 PANTHER PTHR12216 1 553 0.0 T 25-04-2016 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 Gene3D G3DSA:3.40.50.10730 141 347 1.2E-91 T 25-04-2016 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 Hamap MF_00577 Urocanate hydratase [hutU]. 4 554 49.75 T 25-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 Gene3D G3DSA:3.40.1770.10 358 551 1.8E-160 T 25-04-2016 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 Gene3D G3DSA:3.40.1770.10 6 139 1.8E-160 T 25-04-2016 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 SUPERFAMILY SSF111326 3 552 2.49E-259 T 25-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 Pfam PF01175 Urocanase 11 545 5.4E-258 T 25-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 PANTHER PTHR12216:SF3 1 553 0.0 T 25-04-2016 SMD_RS14065 a1838725da803b11c87777b575d9bcbf 555 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 551 3.7E-289 T 25-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 PANTHER PTHR11609 9 308 3.3E-190 T 25-04-2016 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 18 303 7.0E-73 T 25-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 Pfam PF01259 SAICAR synthetase 17 279 4.2E-98 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 Gene3D G3DSA:3.30.200.20 5 128 1.1E-40 T 25-04-2016 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 SUPERFAMILY SSF56104 5 305 1.24E-99 T 25-04-2016 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 Gene3D G3DSA:3.30.470.20 129 259 9.6E-57 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 PANTHER PTHR11609:SF6 9 308 3.3E-190 T 25-04-2016 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 304 28.157 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 216 224 - T 25-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMD_RS20305 9f66c3027091e449077c9da54e943a17 308 ProSitePatterns PS01057 SAICAR synthetase signature 1. 117 131 - T 25-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMD_RS18810 b5a1e8ece3009155b1735c27234e8f9b 198 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 54 171 1.2E-51 T 25-04-2016 IPR018718 Protein of unknown function DUF2242 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 Pfam PF07969 Amidohydrolase family 92 383 2.0E-18 T 25-04-2016 IPR013108 Amidohydrolase 3 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 Gene3D G3DSA:3.20.20.140 67 347 8.9E-94 T 25-04-2016 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 PANTHER PTHR32027:SF9 9 384 5.3E-99 T 25-04-2016 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 Gene3D G3DSA:2.30.40.10 20 66 7.3E-11 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 SUPERFAMILY SSF51338 18 66 6.79E-7 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 PANTHER PTHR32027 9 384 5.3E-99 T 25-04-2016 SMD_RS13280 a6c596cbd2b4ce0d5133974e476c968c 386 SUPERFAMILY SSF51556 52 356 6.54E-73 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 32.355 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PANTHER PTHR11451:SF41 4 309 3.4E-93 T 25-04-2016 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Gene3D G3DSA:1.10.10.350 364 461 1.0E-26 T 25-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 SUPERFAMILY SSF52374 4 293 2.47E-105 T 25-04-2016 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 3.6E-24 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 3.6E-24 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.6E-24 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.6E-24 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.6E-24 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Gene3D G3DSA:3.40.50.620 3 67 4.6E-51 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Gene3D G3DSA:3.40.50.620 181 230 4.6E-51 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Gene3D G3DSA:3.90.800.10 68 180 7.7E-34 T 25-04-2016 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Gene3D G3DSA:1.10.1160.10 233 313 2.0E-29 T 25-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 PANTHER PTHR11451 4 309 3.4E-93 T 25-04-2016 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 SUPERFAMILY SSF48163 299 461 1.7E-36 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 458 1.5E-166 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMD_RS06710 722decb7629332238bcb29ef7b3c36f1 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 7.4E-102 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 Pfam PF02684 Lipid-A-disaccharide synthetase 37 402 4.3E-110 T 25-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 SUPERFAMILY SSF53756 36 329 8.72E-35 T 25-04-2016 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 SUPERFAMILY SSF53756 361 411 8.72E-35 T 25-04-2016 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 Gene3D G3DSA:3.40.50.2000 189 385 7.2E-11 T 25-04-2016 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 32 410 1.2E-112 T 25-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 PANTHER PTHR30372:SF0 31 416 1.0E-132 T 25-04-2016 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 PANTHER PTHR30372 31 416 1.0E-132 T 25-04-2016 SMD_RS06955 61d3d1c137e0cd6fb3b6006de9a85b2f 419 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 34 413 41.271 T 25-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 Gene3D G3DSA:3.40.50.1980 27 240 4.8E-72 T 25-04-2016 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 25-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.081 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PANTHER PTHR21256:SF14 1 428 1.1E-239 T 25-04-2016 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 4.5E-93 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PANTHER PTHR21256 1 428 1.1E-239 T 25-04-2016 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 PIRSF PIRSF000099 1 430 9.7E-159 T 25-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 6.6E-158 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 SUPERFAMILY SSF53720 5 427 9.42E-78 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS10265 9bca840c5f97436ad2cf2a76e14658e5 431 Pfam PF00815 Histidinol dehydrogenase 26 427 6.3E-161 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMD_RS20510 150b812d39b2bb2cbc6ee104a87cc218 301 PANTHER PTHR12366:SF25 14 245 1.0E-139 T 25-04-2016 SMD_RS20510 150b812d39b2bb2cbc6ee104a87cc218 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 224 6.4E-49 T 25-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 SMD_RS20510 150b812d39b2bb2cbc6ee104a87cc218 301 PANTHER PTHR12366 14 245 1.0E-139 T 25-04-2016 SMD_RS20510 150b812d39b2bb2cbc6ee104a87cc218 301 SUPERFAMILY SSF51197 81 223 1.43E-18 T 25-04-2016 SMD_RS20510 150b812d39b2bb2cbc6ee104a87cc218 301 Gene3D G3DSA:2.60.120.330 126 224 1.2E-17 T 25-04-2016 IPR027443 Isopenicillin N synthase-like SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 PANTHER PTHR21248 16 517 1.8E-135 T 25-04-2016 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 Gene3D G3DSA:3.30.870.10 282 494 1.8E-35 T 25-04-2016 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 PANTHER PTHR21248:SF12 16 517 1.8E-135 T 25-04-2016 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 Pfam PF13091 PLD-like domain 101 247 1.7E-19 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 Pfam PF13091 PLD-like domain 332 473 1.3E-18 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 SMART SM00155 421 448 1.8E-5 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 SMART SM00155 188 215 7.5E-4 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 Gene3D G3DSA:3.30.870.10 74 259 1.0E-43 T 25-04-2016 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 SUPERFAMILY SSF56024 292 491 8.07E-32 T 25-04-2016 SMD_RS16105 b769cc8114330fcb56d2a85361dfff53 530 SUPERFAMILY SSF56024 58 258 7.85E-45 T 25-04-2016 SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 PANTHER PTHR30231:SF0 3 164 4.8E-62 T 25-04-2016 SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 SMART SM00479 3 169 5.5E-30 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 Pfam PF00929 Exonuclease 5 164 4.4E-30 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 164 4.9E-43 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 Gene3D G3DSA:3.30.420.10 3 165 6.7E-52 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 PANTHER PTHR30231 3 164 4.8E-62 T 25-04-2016 SMD_RS21460 fa43bb7908a0c71437cb3af9e90801a2 169 SUPERFAMILY SSF53098 3 167 9.49E-46 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS09970 7e1432482bc89bfe7debab0a46deea83 155 Pfam PF01584 CheW-like domain 21 150 2.0E-12 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS09970 7e1432482bc89bfe7debab0a46deea83 155 SMART SM00260 16 148 9.0E-5 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS09970 7e1432482bc89bfe7debab0a46deea83 155 SUPERFAMILY SSF50341 17 149 4.05E-17 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS05245 9c7ec42fac3835ed35d898d3fce7b9b0 501 Pfam PF03929 PepSY-associated TM region 14 432 5.1E-15 T 25-04-2016 IPR005625 PepSY-associated TM protein SMD_RS03670 0f60cd8a0e103a71fcb69e28b4c58ec1 213 Gene3D G3DSA:3.40.50.1110 34 212 3.5E-50 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS03670 0f60cd8a0e103a71fcb69e28b4c58ec1 213 PANTHER PTHR30383 34 210 7.6E-43 T 25-04-2016 SMD_RS03670 0f60cd8a0e103a71fcb69e28b4c58ec1 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 37 198 1.2E-23 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS03670 0f60cd8a0e103a71fcb69e28b4c58ec1 213 SUPERFAMILY SSF52266 34 212 5.34E-47 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 SUPERFAMILY SSF55073 371 520 5.1E-46 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 SUPERFAMILY SSF103190 190 266 2.86E-13 T 25-04-2016 IPR029151 Periplasmic sensor domain-like SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 368 516 8.8E-40 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 Gene3D G3DSA:3.30.450.20 199 253 8.8E-5 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 SMART SM00267 355 520 7.4E-57 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 PANTHER PTHR10799 13 27 2.8E-26 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 PANTHER PTHR10799 172 349 2.8E-26 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 PANTHER PTHR10799 395 517 2.8E-26 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 SUPERFAMILY SSF103190 84 177 1.33E-5 T 25-04-2016 IPR029151 Periplasmic sensor domain-like SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 364 519 5.1E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 Gene3D G3DSA:3.30.70.270 367 520 3.0E-49 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 Pfam PF02743 Cache domain 52 267 1.3E-20 T 25-04-2016 IPR033479 Double Cache domain 1 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 Gene3D G3DSA:3.30.450.20 83 179 1.1E-10 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 PANTHER PTHR10799:SF750 13 27 2.8E-26 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 PANTHER PTHR10799:SF750 172 349 2.8E-26 T 25-04-2016 SMD_RS20045 b597df1b95416ffa36a60ae62a088a6a 524 PANTHER PTHR10799:SF750 395 517 2.8E-26 T 25-04-2016 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 SMART SM00363 28 90 1.4E-7 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 PANTHER PTHR11079 12 324 3.5E-129 T 25-04-2016 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 Pfam PF00849 RNA pseudouridylate synthase 109 259 6.2E-27 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 SUPERFAMILY SSF55174 27 79 4.58E-10 T 25-04-2016 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 SUPERFAMILY SSF55120 95 323 4.64E-57 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 PANTHER PTHR11079:SF84 12 324 3.5E-129 T 25-04-2016 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 Gene3D G3DSA:3.10.290.10 28 76 5.3E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 25 323 2.9E-73 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 146 160 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS14700 e8e94f8e41fbd9477b67994f821f313e 324 Pfam PF01479 S4 domain 28 74 1.6E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS19080 291e6c128738420005a48044e530eecb 425 PANTHER PTHR32347:SF16 3 425 6.8E-97 T 25-04-2016 SMD_RS19080 291e6c128738420005a48044e530eecb 425 Pfam PF13437 HlyD family secretion protein 244 340 4.8E-13 T 25-04-2016 SMD_RS19080 291e6c128738420005a48044e530eecb 425 Gene3D G3DSA:2.40.50.100 242 274 2.0E-7 T 25-04-2016 SMD_RS19080 291e6c128738420005a48044e530eecb 425 Gene3D G3DSA:2.40.50.100 98 117 2.0E-7 T 25-04-2016 SMD_RS19080 291e6c128738420005a48044e530eecb 425 PANTHER PTHR32347 3 425 6.8E-97 T 25-04-2016 SMD_RS19080 291e6c128738420005a48044e530eecb 425 SUPERFAMILY SSF111369 97 172 9.81E-6 T 25-04-2016 SMD_RS19080 291e6c128738420005a48044e530eecb 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 207 424 6.6E-30 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS19080 291e6c128738420005a48044e530eecb 425 Pfam PF13533 Biotin-lipoyl like 96 132 4.4E-7 T 25-04-2016 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 SUPERFAMILY SSF57840 1 40 8.37E-14 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 40 0.007 T 25-04-2016 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 Pfam PF00444 Ribosomal protein L36 1 40 3.9E-17 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 PANTHER PTHR18804:SF11 1 40 5.6E-18 T 25-04-2016 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.137 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 PANTHER PTHR18804 1 40 5.6E-18 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS09700 56408f70b69b167aa1e8157a355da676 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 8.9E-9 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 PANTHER PTHR10799:SF750 271 348 3.8E-15 T 25-04-2016 SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 348 2.0E-22 T 25-04-2016 IPR000160 GGDEF domain SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 240 350 3.2E-25 T 25-04-2016 IPR000160 GGDEF domain SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 SMART SM00267 231 415 4.2E-36 T 25-04-2016 IPR000160 GGDEF domain SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 SUPERFAMILY SSF55073 247 414 3.45E-34 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 Gene3D G3DSA:3.30.70.270 244 414 1.8E-41 T 25-04-2016 SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 PANTHER PTHR10799 375 412 3.8E-15 T 25-04-2016 SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 PANTHER PTHR10799:SF750 375 412 3.8E-15 T 25-04-2016 SMD_RS21765 ceffc39e1766f3369ce3b7c9d042c3f4 426 PANTHER PTHR10799 271 348 3.8E-15 T 25-04-2016 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 233 1.0E-43 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 SUPERFAMILY SSF56601 249 607 5.63E-92 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 Gene3D G3DSA:3.40.710.10 248 608 1.2E-99 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 1.7E-210 T 25-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 SUPERFAMILY SSF56519 57 248 4.05E-50 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 603 1.5E-63 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 PANTHER PTHR30627:SF2 5 648 1.0E-229 T 25-04-2016 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 Gene3D G3DSA:3.90.1310.10 130 247 6.3E-33 T 25-04-2016 SMD_RS18865 a0aa3668f7bffade8ff9681b2e85eb8d 691 PANTHER PTHR30627 5 648 1.0E-229 T 25-04-2016 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 247 89.492 T 25-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 246 6.1E-68 T 25-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 246 1.3E-85 T 25-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 SUPERFAMILY SSF63892 1 247 1.57E-79 T 25-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 PANTHER PTHR30456:SF0 1 247 6.4E-119 T 25-04-2016 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 Gene3D G3DSA:3.20.20.70 1 247 1.6E-87 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00180 9b6a86258de92299664c72e94a5e89f7 247 PANTHER PTHR30456 1 247 6.4E-119 T 25-04-2016 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 Pfam PF05552 Conserved TM helix 27 63 6.2E-7 T 25-04-2016 IPR008910 Conserved TM helix SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 SUPERFAMILY SSF82861 28 112 1.18E-16 T 25-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 Pfam PF00924 Mechanosensitive ion channel 71 268 1.9E-48 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 Gene3D G3DSA:2.30.30.60 129 177 2.4E-15 T 25-04-2016 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 Gene3D G3DSA:3.30.70.100 182 266 1.8E-23 T 25-04-2016 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 SUPERFAMILY SSF82689 182 277 7.98E-27 T 25-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 SUPERFAMILY SSF50182 113 179 5.56E-16 T 25-04-2016 IPR010920 LSM domain SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 PANTHER PTHR30221:SF7 20 277 5.4E-79 T 25-04-2016 SMD_RS13670 bf4d7f429d79362e83f3507c0bbdad54 297 PANTHER PTHR30221 20 277 5.4E-79 T 25-04-2016 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 SUPERFAMILY SSF56719 35 487 1.31E-150 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 SUPERFAMILY SSF101904 501 743 1.96E-48 T 25-04-2016 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 698 7.6E-4 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 643 0.054 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Gene3D G3DSA:3.90.199.10 35 241 1.2E-102 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Gene3D G3DSA:3.90.199.10 337 401 1.2E-102 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 745 33.638 T 25-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 742 0.0 T 25-04-2016 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 PANTHER PTHR10169:SF30 9 527 0.0 T 25-04-2016 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 SMART SM00434 15 465 5.1E-223 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 PANTHER PTHR10169 9 527 0.0 T 25-04-2016 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Gene3D G3DSA:2.120.10.90 500 710 1.2E-28 T 25-04-2016 SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Gene3D G3DSA:3.30.1360.40 242 335 3.9E-23 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMD_RS07110 917c98862f1a84f7b13a0dbb797c62fd 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 6.9E-133 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 Gene3D G3DSA:3.40.30.10 7 104 1.0E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 PANTHER PTHR11260:SF289 9 221 3.2E-103 T 25-04-2016 SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 PANTHER PTHR11260 9 221 3.2E-103 T 25-04-2016 SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 SUPERFAMILY SSF47616 90 220 1.21E-32 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 11 221 1.1E-91 T 25-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 Gene3D G3DSA:1.20.1050.10 105 221 2.0E-53 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 SUPERFAMILY SSF52833 9 113 3.54E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS02850 d53e44c60296dd9a630ccc9954d7abb8 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 88 3.5E-16 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 SMART SM00267 403 573 3.9E-58 T 25-04-2016 IPR000160 GGDEF domain SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 Gene3D G3DSA:3.30.70.270 416 573 1.3E-49 T 25-04-2016 SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 569 1.5E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 PANTHER PTHR10799 257 352 7.6E-28 T 25-04-2016 SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 PANTHER PTHR10799 444 570 7.6E-28 T 25-04-2016 SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 411 572 8.9E-45 T 25-04-2016 IPR000160 GGDEF domain SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 PANTHER PTHR10799:SF750 257 352 7.6E-28 T 25-04-2016 SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 PANTHER PTHR10799:SF750 444 570 7.6E-28 T 25-04-2016 SMD_RS05885 5110e5d48aa1a20bd6ccc7a4b033a6ee 580 SUPERFAMILY SSF55073 419 573 3.06E-45 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 Pfam PF01192 RNA polymerase Rpb6 8 60 6.2E-17 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 PANTHER PTHR34476 2 92 1.2E-24 T 25-04-2016 SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.354 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 SUPERFAMILY SSF63562 1 77 7.46E-24 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 SMART SM01409 8 62 7.6E-17 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 2.0E-19 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS17875 72395a4691c836e2d35d50e8ef14d081 99 Gene3D G3DSA:3.90.940.10 1 77 4.3E-16 T 25-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 20 158 22.782 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 Gene3D G3DSA:3.30.420.140 20 158 6.7E-41 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 SUPERFAMILY SSF53098 20 157 8.19E-33 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 SMART SM00732 20 120 7.1E-31 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 PANTHER PTHR33317 14 156 9.1E-34 T 25-04-2016 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 23 154 4.5E-32 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMD_RS05380 0b0a1b0daed777146d0839a8c48adfbc 164 Pfam PF03652 Holliday junction resolvase 21 155 1.6E-36 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 SUPERFAMILY SSF56954 5 470 4.45E-108 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 PANTHER PTHR30203 18 470 3.9E-127 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 PANTHER PTHR30203:SF3 18 470 3.9E-127 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 469 6.8E-108 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Gene3D G3DSA:2.20.200.10 319 354 7.6E-19 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Gene3D G3DSA:2.20.200.10 100 144 7.6E-19 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Gene3D G3DSA:1.20.1600.10 356 470 4.3E-93 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Gene3D G3DSA:1.20.1600.10 145 318 4.3E-93 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Gene3D G3DSA:1.20.1600.10 52 90 4.3E-93 T 25-04-2016 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Pfam PF02321 Outer membrane efflux protein 286 467 2.6E-29 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS18495 ed80c48949723739a88faa1db0e5ebc4 470 Pfam PF02321 Outer membrane efflux protein 66 256 2.7E-26 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS18870 b4adf4c6e7147561210b9bb2fe768978 161 Pfam PF04093 rod shape-determining protein MreD 7 153 7.2E-31 T 25-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SMD_RS18870 b4adf4c6e7147561210b9bb2fe768978 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 152 1.2E-31 T 25-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SMD_RS18870 b4adf4c6e7147561210b9bb2fe768978 161 PIRSF PIRSF018472 1 160 1.1E-48 T 25-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type SMD_RS18870 b4adf4c6e7147561210b9bb2fe768978 161 PANTHER PTHR37484 1 161 9.5E-58 T 25-04-2016 SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 202 1.4E-8 T 25-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 126 1.7E-24 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 SUPERFAMILY SSF55347 132 261 2.29E-26 T 25-04-2016 SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 Gene3D G3DSA:3.30.360.10 146 328 5.8E-34 T 25-04-2016 SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 SUPERFAMILY SSF51735 7 157 4.73E-48 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 PANTHER PTHR22604 8 328 1.5E-65 T 25-04-2016 SMD_RS18950 01752cb1d937d755c10fa1ec00d6a4f3 330 Gene3D G3DSA:3.40.50.720 6 145 8.4E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02040 a134659dbffe92d808103341fb76c56a 196 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 32 175 9.0E-45 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 SMD_RS02040 a134659dbffe92d808103341fb76c56a 196 PANTHER PTHR21320 18 175 2.9E-43 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 SMD_RS02040 a134659dbffe92d808103341fb76c56a 196 PANTHER PTHR21320:SF3 18 175 2.9E-43 T 25-04-2016 SMD_RS02040 a134659dbffe92d808103341fb76c56a 196 SUPERFAMILY SSF110111 63 177 1.44E-44 T 25-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain SMD_RS02040 a134659dbffe92d808103341fb76c56a 196 Gene3D G3DSA:2.60.370.10 62 181 1.5E-46 T 25-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain SMD_RS02040 a134659dbffe92d808103341fb76c56a 196 PIRSF PIRSF005413 1 192 2.1E-58 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 PIRSF PIRSF000005 2 248 2.1E-59 T 25-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 PANTHER PTHR33751:SF3 52 253 3.3E-49 T 25-04-2016 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 SUPERFAMILY SSF46626 52 133 1.29E-18 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 Pfam PF00034 Cytochrome c 55 133 5.6E-8 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 Pfam PF00034 Cytochrome c 158 245 4.0E-10 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 SUPERFAMILY SSF46626 154 245 1.17E-17 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 Gene3D G3DSA:1.10.760.10 55 133 6.5E-24 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 Gene3D G3DSA:1.10.760.10 159 246 7.7E-26 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18615 cd7580266e75ad6c0c71b4daaea65050 266 PANTHER PTHR33751 52 253 3.3E-49 T 25-04-2016 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 PIRSF PIRSF002756 5 360 3.2E-108 T 25-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 Gene3D G3DSA:3.40.190.10 203 360 3.4E-34 T 25-04-2016 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 PANTHER PTHR30570:SF0 48 359 3.7E-134 T 25-04-2016 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 Gene3D G3DSA:3.40.190.10 50 192 2.6E-54 T 25-04-2016 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 Pfam PF12849 PBP superfamily domain 41 330 6.9E-64 T 25-04-2016 IPR024370 PBP domain SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 PANTHER PTHR30570 48 359 3.7E-134 T 25-04-2016 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 SUPERFAMILY SSF53850 51 359 2.37E-100 T 25-04-2016 SMD_RS07250 8e23cd8db45cd80c8832c143f4758627 362 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 359 1.4E-124 T 25-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SMD_RS19680 20dc57eeef5c36c8565bce34b3dfa3ca 186 PANTHER PTHR17490 6 182 1.2E-85 T 25-04-2016 SMD_RS19680 20dc57eeef5c36c8565bce34b3dfa3ca 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 185 38.695 T 25-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 SMD_RS19680 20dc57eeef5c36c8565bce34b3dfa3ca 186 Gene3D G3DSA:3.90.870.10 5 185 8.6E-55 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMD_RS19680 20dc57eeef5c36c8565bce34b3dfa3ca 186 PANTHER PTHR17490:SF8 6 182 1.2E-85 T 25-04-2016 SMD_RS19680 20dc57eeef5c36c8565bce34b3dfa3ca 186 Pfam PF01300 Telomere recombination 12 181 3.8E-39 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 SMD_RS19680 20dc57eeef5c36c8565bce34b3dfa3ca 186 SUPERFAMILY SSF55821 6 184 1.37E-49 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMD_RS16895 97bea5ae524b76547e8797bebc3a1853 287 SUPERFAMILY SSF53474 35 279 1.73E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16895 97bea5ae524b76547e8797bebc3a1853 287 PANTHER PTHR40841 46 206 2.4E-20 T 25-04-2016 SMD_RS16895 97bea5ae524b76547e8797bebc3a1853 287 Gene3D G3DSA:3.40.50.1820 43 280 2.8E-58 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16895 97bea5ae524b76547e8797bebc3a1853 287 PANTHER PTHR40841:SF2 46 206 2.4E-20 T 25-04-2016 SMD_RS16895 97bea5ae524b76547e8797bebc3a1853 287 Pfam PF00756 Putative esterase 49 207 2.7E-21 T 25-04-2016 IPR000801 Putative esterase SMD_RS20075 6cbda823e0bb42eac529527010f83d13 182 PANTHER PTHR11711:SF117 5 158 1.0E-17 T 25-04-2016 SMD_RS20075 6cbda823e0bb42eac529527010f83d13 182 Gene3D G3DSA:3.40.50.300 2 140 7.1E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20075 6cbda823e0bb42eac529527010f83d13 182 PANTHER PTHR11711 5 158 1.0E-17 T 25-04-2016 SMD_RS20075 6cbda823e0bb42eac529527010f83d13 182 Pfam PF08477 Ras of Complex, Roc, domain of DAPkinase 5 128 4.1E-8 T 25-04-2016 IPR013684 Mitochondrial Rho-like GO:0005525|GO:0007264 SMD_RS20075 6cbda823e0bb42eac529527010f83d13 182 SUPERFAMILY SSF52540 3 168 1.42E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 SUPERFAMILY SSF52833 28 193 2.46E-39 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 PIRSF PIRSF001488 4 214 3.8E-33 T 25-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 Gene3D G3DSA:3.40.30.10 5 126 4.5E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 Gene3D G3DSA:3.40.30.10 134 203 6.4E-14 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 ProSitePatterns PS00194 Thioredoxin family active site. 53 71 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 Pfam PF01323 DSBA-like thioredoxin domain 68 200 2.9E-13 T 25-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 PANTHER PTHR35891:SF2 4 216 5.2E-43 T 25-04-2016 SMD_RS18620 e2a5964fdb1aee0f5ebc79f5a34e014f 216 PANTHER PTHR35891 4 216 5.2E-43 T 25-04-2016 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 Gene3D G3DSA:2.170.130.10 55 169 2.4E-30 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 Gene3D G3DSA:2.40.170.20 170 693 3.6E-108 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 693 1.3E-82 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 SUPERFAMILY SSF56935 28 693 6.92E-117 T 25-04-2016 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 Pfam PF00593 TonB dependent receptor 446 692 8.5E-31 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 168 1.1E-20 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 676 693 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS13085 2c9f99b447307e7ca93b94971239308b 693 PANTHER PTHR30442 33 692 1.8E-64 T 25-04-2016 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 Pfam PF04356 Protein of unknown function (DUF489) 7 196 4.0E-63 T 25-04-2016 IPR007451 Uncharacterised protein family UPF0274 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 31.629 T 25-04-2016 IPR007451 Uncharacterised protein family UPF0274 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 22 195 1.0E-68 T 25-04-2016 IPR007451 Uncharacterised protein family UPF0274 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 Gene3D G3DSA:1.10.3890.10 4 203 2.0E-67 T 25-04-2016 IPR007451 Uncharacterised protein family UPF0274 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 PANTHER PTHR38100 2 204 2.8E-79 T 25-04-2016 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 PANTHER PTHR38100:SF1 2 204 2.8E-79 T 25-04-2016 SMD_RS11025 a5e988aba2769c03a7662c78c093cd41 204 SUPERFAMILY SSF101322 4 203 7.45E-62 T 25-04-2016 IPR007451 Uncharacterised protein family UPF0274 SMD_RS20875 e0f3ace7b761516557eb38ec392665df 214 Gene3D G3DSA:3.40.50.620 44 178 4.8E-30 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS20875 e0f3ace7b761516557eb38ec392665df 214 PANTHER PTHR30336:SF4 19 189 1.5E-45 T 25-04-2016 SMD_RS20875 e0f3ace7b761516557eb38ec392665df 214 Pfam PF02698 DUF218 domain 51 195 5.1E-31 T 25-04-2016 IPR003848 Domain of unknown function DUF218 SMD_RS20875 e0f3ace7b761516557eb38ec392665df 214 PANTHER PTHR30336 19 189 1.5E-45 T 25-04-2016 SMD_RS01080 d067500c912d31285af842675573beed 143 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 5.5E-12 T 25-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 11 535 1.2E-123 T 25-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 Pfam PF00664 ABC transporter transmembrane region 69 178 1.3E-5 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 SUPERFAMILY SSF90123 8 327 1.7E-30 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 SMART SM00382 367 559 1.7E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 PANTHER PTHR24222:SF30 10 556 1.6E-163 T 25-04-2016 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 Gene3D G3DSA:3.40.50.300 341 536 5.7E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 PANTHER PTHR24222 10 556 1.6E-163 T 25-04-2016 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 Pfam PF00005 ABC transporter 358 505 6.7E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 SUPERFAMILY SSF52540 331 552 3.03E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 Gene3D G3DSA:1.20.1560.10 8 327 1.9E-26 T 25-04-2016 SMD_RS14855 136fa767a0acc56a95a3c63cfe50c7d7 559 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 SMART SM00862 148 222 3.3E-13 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 Gene3D G3DSA:1.10.10.10 126 223 1.4E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 SUPERFAMILY SSF52172 1 125 2.56E-37 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 PANTHER PTHR26402:SF552 2 223 1.4E-70 T 25-04-2016 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 PANTHER PTHR26402 2 223 1.4E-70 T 25-04-2016 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 SUPERFAMILY SSF46894 127 222 1.05E-17 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 Gene3D G3DSA:3.40.50.2300 2 124 2.5E-37 T 25-04-2016 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 SMART SM00448 2 114 2.9E-38 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 Pfam PF00072 Response regulator receiver domain 5 114 9.7E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12870 310c9774d01909c56efcdb8b3755429e 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 6.4E-13 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 Gene3D G3DSA:3.40.640.10 37 285 2.8E-109 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 Gene3D G3DSA:3.90.1150.10 286 417 5.5E-56 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.135 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.7E-183 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 PIRSF PIRSF000412 4 417 1.4E-171 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 25-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 PANTHER PTHR11680:SF9 7 417 0.0 T 25-04-2016 SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 SUPERFAMILY SSF53383 7 416 3.06E-183 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS03285 ac517be23eefbac9eaea95a0ced574da 417 PANTHER PTHR11680 7 417 0.0 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMD_RS08975 0ff92002e4ffc2098b3f2fb5d511f003 233 PANTHER PTHR13903 1 232 4.4E-112 T 25-04-2016 IPR012093 Pirin SMD_RS08975 0ff92002e4ffc2098b3f2fb5d511f003 233 Pfam PF02678 Pirin 10 119 2.9E-33 T 25-04-2016 IPR003829 Pirin, N-terminal domain SMD_RS08975 0ff92002e4ffc2098b3f2fb5d511f003 233 SUPERFAMILY SSF51182 1 231 1.68E-77 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS08975 0ff92002e4ffc2098b3f2fb5d511f003 233 PIRSF PIRSF006232 1 230 3.2E-53 T 25-04-2016 IPR012093 Pirin SMD_RS08975 0ff92002e4ffc2098b3f2fb5d511f003 233 Gene3D G3DSA:2.60.120.10 4 231 1.7E-72 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS08975 0ff92002e4ffc2098b3f2fb5d511f003 233 PANTHER PTHR13903:SF7 1 232 4.4E-112 T 25-04-2016 SMD_RS09545 f45d78dd1b45d01fb34a63316227bd4f 197 Gene3D G3DSA:3.40.50.450 2 188 2.4E-67 T 25-04-2016 SMD_RS09545 f45d78dd1b45d01fb34a63316227bd4f 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 1.0E-56 T 25-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SMD_RS09545 f45d78dd1b45d01fb34a63316227bd4f 197 PANTHER PTHR31223 1 187 1.9E-99 T 25-04-2016 SMD_RS09545 f45d78dd1b45d01fb34a63316227bd4f 197 SUPERFAMILY SSF102405 1 179 1.27E-61 T 25-04-2016 SMD_RS09545 f45d78dd1b45d01fb34a63316227bd4f 197 PANTHER PTHR31223:SF0 1 187 1.9E-99 T 25-04-2016 SMD_RS09545 f45d78dd1b45d01fb34a63316227bd4f 197 Pfam PF03641 Possible lysine decarboxylase 46 172 5.5E-38 T 25-04-2016 IPR031100 LOG family SMD_RS04835 d908b1c5878c9448788534dcefc3dcaa 87 Pfam PF13202 EF hand 26 46 2.6E-4 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS04835 d908b1c5878c9448788534dcefc3dcaa 87 Gene3D G3DSA:1.10.238.10 23 80 2.1E-9 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS04835 d908b1c5878c9448788534dcefc3dcaa 87 SUPERFAMILY SSF47473 24 79 8.15E-9 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 SUPERFAMILY SSF52540 10 325 4.38E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 Pfam PF00437 Type II/IV secretion system protein 27 325 4.3E-63 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 Gene3D G3DSA:3.30.450.90 24 119 6.8E-27 T 25-04-2016 SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 Gene3D G3DSA:3.40.50.300 159 335 4.7E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 29 337 1.6E-131 T 25-04-2016 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 PANTHER PTHR30258 25 138 4.9E-54 T 25-04-2016 SMD_RS13780 e8139b67ab4b4d4d9f64ec2ac152b860 347 PANTHER PTHR30258 161 342 4.9E-54 T 25-04-2016 SMD_RS20340 fe0a0910d497438da2458ef8fd03683a 129 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 94 6.0E-22 T 25-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SMD_RS20340 fe0a0910d497438da2458ef8fd03683a 129 PANTHER PTHR34703 2 129 5.2E-40 T 25-04-2016 SMD_RS20340 fe0a0910d497438da2458ef8fd03683a 129 PANTHER PTHR34703:SF1 2 129 5.2E-40 T 25-04-2016 SMD_RS20340 fe0a0910d497438da2458ef8fd03683a 129 Pfam PF03334 Na+/H+ antiporter subunit 12 92 1.3E-24 T 25-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 SUPERFAMILY SSF52794 112 210 1.18E-35 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 Gene3D G3DSA:3.40.50.2300 109 211 7.8E-41 T 25-04-2016 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 SUPERFAMILY SSF52794 6 98 2.88E-15 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 PANTHER PTHR30505:SF0 10 559 4.0E-246 T 25-04-2016 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 PANTHER PTHR30505 10 559 4.0E-246 T 25-04-2016 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 Gene3D G3DSA:3.40.50.2300 7 100 1.5E-13 T 25-04-2016 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 115 204 2.0E-17 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 114 197 1.9E-36 T 25-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SMD_RS11705 80f8e1698eb144589de9ee202b0babaf 568 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 222 560 1.4E-138 T 25-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 SMART SM00862 159 235 1.5E-20 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 PANTHER PTHR26402 8 239 4.8E-81 T 25-04-2016 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 Pfam PF00072 Response regulator receiver domain 11 119 2.5E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 235 1.3E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 Gene3D G3DSA:3.40.50.2300 4 127 2.4E-41 T 25-04-2016 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 PANTHER PTHR26402:SF292 8 239 4.8E-81 T 25-04-2016 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 SUPERFAMILY SSF52172 5 133 2.28E-42 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 SUPERFAMILY SSF46894 141 235 3.12E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 SMART SM00448 8 118 9.9E-42 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07195 445cb7a46936c790ea856343b522f40c 242 Gene3D G3DSA:1.10.10.10 140 237 2.0E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 PANTHER PTHR10160:SF24 9 127 2.1E-206 T 25-04-2016 SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 PANTHER PTHR10160:SF24 143 485 2.1E-206 T 25-04-2016 SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 Gene3D G3DSA:3.40.50.1220 304 481 3.0E-82 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 PIRSF PIRSF000204 8 481 2.7E-162 T 25-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 Pfam PF02233 NAD(P) transhydrogenase beta subunit 14 477 2.5E-168 T 25-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 PANTHER PTHR10160 143 485 2.1E-206 T 25-04-2016 SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 SUPERFAMILY SSF52467 307 480 3.52E-72 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS03930 0ee8033200a359926d5b370585ac2366 486 PANTHER PTHR10160 9 127 2.1E-206 T 25-04-2016 SMD_RS11970 901c910ef95c4da18d27da560b22c97b 180 SUPERFAMILY SSF51316 10 150 2.72E-11 T 25-04-2016 IPR011057 Mss4-like SMD_RS11970 901c910ef95c4da18d27da560b22c97b 180 Gene3D G3DSA:3.90.1590.10 10 39 4.5E-4 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 Pfam PF14497 Glutathione S-transferase, C-terminal domain 113 200 7.8E-7 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 8.4E-16 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 Gene3D G3DSA:1.20.1050.10 90 195 1.0E-21 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 SUPERFAMILY SSF52833 4 85 4.75E-24 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 PANTHER PTHR11260 1 201 1.0E-34 T 25-04-2016 SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 Gene3D G3DSA:3.40.30.10 4 89 4.9E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14580 b3c57a3b717840d13d63b9a3103b890c 211 SUPERFAMILY SSF47616 82 202 1.39E-21 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS12755 c7a2f343ea4f80922931272c22ee1b55 86 Gene3D G3DSA:3.10.20.30 3 86 2.5E-9 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS12755 c7a2f343ea4f80922931272c22ee1b55 86 SUPERFAMILY SSF54285 3 86 5.79E-10 T 25-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SMD_RS12755 c7a2f343ea4f80922931272c22ee1b55 86 Pfam PF02597 ThiS family 7 86 1.3E-6 T 25-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SMD_RS19620 1f91f4a7a70e77aa1b1d4b51101bbe5a 268 PANTHER PTHR10859 7 98 5.8E-21 T 25-04-2016 SMD_RS19620 1f91f4a7a70e77aa1b1d4b51101bbe5a 268 SUPERFAMILY SSF53448 8 154 7.5E-24 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS19620 1f91f4a7a70e77aa1b1d4b51101bbe5a 268 Pfam PF00535 Glycosyl transferase family 2 14 133 2.1E-15 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS19620 1f91f4a7a70e77aa1b1d4b51101bbe5a 268 Gene3D G3DSA:3.90.550.10 11 97 4.9E-10 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS19620 1f91f4a7a70e77aa1b1d4b51101bbe5a 268 PANTHER PTHR10859:SF99 7 98 5.8E-21 T 25-04-2016 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 SUPERFAMILY SSF53697 247 612 3.34E-110 T 25-04-2016 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Gene3D G3DSA:3.60.20.10 2 236 1.1E-76 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 SUPERFAMILY SSF56235 2 236 6.43E-71 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 PANTHER PTHR10937 1 612 0.0 T 25-04-2016 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Gene3D G3DSA:3.40.50.10490 449 612 8.3E-66 T 25-04-2016 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Pfam PF01380 SIS domain 466 594 2.7E-26 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Pfam PF01380 SIS domain 298 419 3.8E-28 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 2.0E-258 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 39.481 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Pfam PF13522 Glutamine amidotransferase domain 64 193 1.3E-21 T 25-04-2016 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 PANTHER PTHR10937:SF0 1 612 0.0 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMD_RS19075 24d9dbac7a3b4c64ec6425bb3469e43f 612 Gene3D G3DSA:3.40.50.10490 246 448 8.5E-59 T 25-04-2016 SMD_RS04900 fedaf969ae5edad082f628f4149e627e 242 Pfam PF13605 Domain of unknown function (DUF4141) 7 37 1.5E-8 T 25-04-2016 IPR025415 Protein of unknown function DUF4141 SMD_RS04900 fedaf969ae5edad082f628f4149e627e 242 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 7 239 1.9E-73 T 25-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ SMD_RS04900 fedaf969ae5edad082f628f4149e627e 242 SUPERFAMILY SSF101082 26 203 4.84E-5 T 25-04-2016 IPR023220 Type IV secretion system, VirB5-domain SMD_RS13590 ec8b5a3f080d4c6aeb284f07e370d313 96 Gene3D G3DSA:3.30.70.900 1 90 1.9E-25 T 25-04-2016 SMD_RS13590 ec8b5a3f080d4c6aeb284f07e370d313 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 5.9E-14 T 25-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SMD_RS13590 ec8b5a3f080d4c6aeb284f07e370d313 96 PANTHER PTHR33336 1 94 3.7E-23 T 25-04-2016 SMD_RS13590 ec8b5a3f080d4c6aeb284f07e370d313 96 SUPERFAMILY SSF54909 1 88 1.26E-25 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 PIRSF PIRSF006621 12 336 1.3E-77 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 SUPERFAMILY SSF51395 22 325 8.96E-71 T 25-04-2016 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 Gene3D G3DSA:3.20.20.70 22 263 7.4E-74 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 PANTHER PTHR11082:SF29 11 328 1.3E-134 T 25-04-2016 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 PANTHER PTHR11082 11 328 1.3E-134 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 Pfam PF01207 Dihydrouridine synthase (Dus) 25 330 1.2E-79 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 104 122 - T 25-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMD_RS01505 8e4f59a02f7617a6c6384b11fef39f1e 343 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 17 336 47.878 T 25-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 Pfam PF02954 Bacterial regulatory protein, Fis family 146 179 8.9E-13 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 SMART SM00448 9 118 3.0E-18 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 146 163 3.5E-9 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 163 183 3.5E-9 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 SUPERFAMILY SSF52172 10 119 8.68E-28 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 Gene3D G3DSA:3.40.50.2300 10 118 1.2E-26 T 25-04-2016 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 SUPERFAMILY SSF46689 90 179 1.54E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 Gene3D G3DSA:1.10.10.60 127 181 6.8E-25 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09090 8ea511ab359604bb5ad755a907a459d1 189 Pfam PF00072 Response regulator receiver domain 10 116 6.5E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS00535 e361099d4948b6e7f9a47770b42fc18e 602 SUPERFAMILY SSF52317 251 459 1.49E-5 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 SUPERFAMILY SSF57783 3 36 3.23E-11 T 25-04-2016 SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 Pfam PF08274 PhnA Zinc-Ribbon 5 32 6.5E-11 T 25-04-2016 IPR013987 PhnA protein, N-terminal SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 Gene3D G3DSA:2.30.30.40 41 111 2.4E-31 T 25-04-2016 SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 Gene3D G3DSA:2.20.25.10 1 38 2.9E-17 T 25-04-2016 SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 SUPERFAMILY SSF82057 41 111 1.92E-24 T 25-04-2016 SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 PANTHER PTHR30305 2 111 5.3E-62 T 25-04-2016 SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 Pfam PF03831 PhnA domain 43 111 2.0E-30 T 25-04-2016 IPR013988 PhnA protein, C-terminal SMD_RS16040 56776ccfa18acc8cc14c396aca5b7870 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 4.1E-32 T 25-04-2016 IPR004624 PhnA protein SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 SUPERFAMILY SSF161111 7 220 1.7E-40 T 25-04-2016 SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 Pfam PF01545 Cation efflux family 12 217 1.3E-31 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 Gene3D G3DSA:1.20.1510.10 8 218 3.3E-33 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 301 3.3E-39 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 PANTHER PTHR13414 6 282 7.7E-99 T 25-04-2016 SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 Gene3D G3DSA:3.30.70.1350 223 297 5.7E-4 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SMD_RS12090 312140a97f2b4fdbe2b7227f4417b38a 319 SUPERFAMILY SSF160240 223 296 3.53E-5 T 25-04-2016 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 PANTHER PTHR30537:SF20 1 293 1.7E-158 T 25-04-2016 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 Gene3D G3DSA:3.40.190.10 179 260 6.0E-9 T 25-04-2016 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 Gene3D G3DSA:3.40.190.10 93 178 5.4E-25 T 25-04-2016 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 SUPERFAMILY SSF46785 4 112 6.08E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 Pfam PF03466 LysR substrate binding domain 90 293 4.5E-42 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 PANTHER PTHR30537 1 293 1.7E-158 T 25-04-2016 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 SUPERFAMILY SSF53850 90 297 5.58E-42 T 25-04-2016 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.9E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS12370 dd11ec05c6b77e9eaf16ba0783e61a90 300 Gene3D G3DSA:1.10.10.10 2 84 1.1E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10020 33e91be06ae0bc6654260775bc57b63a 292 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 68 182 4.9E-14 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMD_RS10020 33e91be06ae0bc6654260775bc57b63a 292 SUPERFAMILY SSF161098 69 282 9.29E-37 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS10020 33e91be06ae0bc6654260775bc57b63a 292 PANTHER PTHR30450:SF2 51 292 2.7E-66 T 25-04-2016 SMD_RS10020 33e91be06ae0bc6654260775bc57b63a 292 Gene3D G3DSA:1.10.3720.10 63 288 7.2E-43 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS10020 33e91be06ae0bc6654260775bc57b63a 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 287 2.6E-19 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS10020 33e91be06ae0bc6654260775bc57b63a 292 PANTHER PTHR30450 51 292 2.7E-66 T 25-04-2016 SMD_RS03520 b42baaa71524befd930d953eb389e09f 275 Gene3D G3DSA:3.20.20.220 3 273 1.5E-99 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMD_RS03520 b42baaa71524befd930d953eb389e09f 275 SUPERFAMILY SSF51730 3 273 1.33E-89 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMD_RS03520 b42baaa71524befd930d953eb389e09f 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 2.4E-100 T 25-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMD_RS03520 b42baaa71524befd930d953eb389e09f 275 PANTHER PTHR21091 132 274 3.7E-39 T 25-04-2016 SMD_RS03520 b42baaa71524befd930d953eb389e09f 275 Pfam PF02219 Methylenetetrahydrofolate reductase 2 272 8.5E-85 T 25-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMD_RS03520 b42baaa71524befd930d953eb389e09f 275 PANTHER PTHR21091:SF31 132 274 3.7E-39 T 25-04-2016 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Gene3D G3DSA:1.20.120.160 4 139 1.6E-37 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SUPERFAMILY SSF55874 296 479 1.83E-40 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 7.5E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 7.5E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 7.5E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 7.5E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 234 292 2.2E-11 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Gene3D G3DSA:1.10.287.560 234 294 1.9E-17 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SMART SM00387 338 481 1.5E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SUPERFAMILY SSF47384 234 294 6.67E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SMART SM00260 473 610 3.1E-30 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Pfam PF01627 Hpt domain 10 105 1.3E-16 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Gene3D G3DSA:2.40.50.180 505 565 6.8E-9 T 25-04-2016 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SMART SM01231 233 293 1.1E-16 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Pfam PF01584 CheW-like domain 487 609 1.7E-25 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SMART SM00073 5 102 1.0E-19 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Gene3D G3DSA:3.30.565.10 297 480 3.5E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 PANTHER PTHR22617:SF6 6 609 5.5E-195 T 25-04-2016 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 PANTHER PTHR22617 6 609 5.5E-195 T 25-04-2016 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SUPERFAMILY SSF47226 6 121 1.2E-28 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 SUPERFAMILY SSF50341 480 609 8.5E-31 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 480 8.0E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Gene3D G3DSA:2.30.30.40 566 609 1.1E-21 T 25-04-2016 SMD_RS10740 366fc5484e852ff97a862a5877b75238 614 Gene3D G3DSA:2.30.30.40 481 502 1.1E-21 T 25-04-2016 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 Gene3D G3DSA:2.160.20.70 165 280 7.9E-36 T 25-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 27 129 6.7E-20 T 25-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 29 281 25.801 T 25-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 PANTHER PTHR34108:SF1 50 281 8.1E-55 T 25-04-2016 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 180 277 2.6E-30 T 25-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 SUPERFAMILY SSF63848 180 280 9.55E-29 T 25-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 30 280 7.3E-68 T 25-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 SMD_RS06120 45611e738aad6ebe50c94e0133111be5 281 PANTHER PTHR34108 50 281 8.1E-55 T 25-04-2016 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 PANTHER PTHR26402:SF474 2 208 2.6E-96 T 25-04-2016 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 Pfam PF00072 Response regulator receiver domain 5 114 8.1E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 SMART SM00421 147 204 1.9E-23 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 Gene3D G3DSA:1.10.10.10 138 206 3.8E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21570 8e5905828ff275333714f2c78648b068 221 SUPERFAMILY SSF52172 2 128 7.4E-27 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS21570 8e5905828ff275333714f2c78648b068 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 4.3E-19 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 PANTHER PTHR26402 2 208 2.6E-96 T 25-04-2016 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 SUPERFAMILY SSF46894 141 207 2.14E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 Gene3D G3DSA:3.40.50.2300 2 129 8.7E-30 T 25-04-2016 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS21570 8e5905828ff275333714f2c78648b068 221 SMART SM00448 2 116 2.4E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 SUPERFAMILY SSF52141 11 231 5.89E-91 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 SMART SM00987 59 219 1.0E-39 T 25-04-2016 SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 67 76 - T 25-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 14 230 39.645 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 PANTHER PTHR11264 1 237 6.3E-137 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 Gene3D G3DSA:3.40.470.10 8 231 1.1E-99 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 15 223 2.3E-81 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 Pfam PF03167 Uracil DNA glycosylase superfamily 63 218 1.7E-25 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS20010 3cbe12a6e9b9f2c3fc5eab2b78af044c 237 SMART SM00986 59 219 1.0E-39 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 Gene3D G3DSA:3.90.226.10 56 271 1.3E-48 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 7.5E-47 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 7.5E-47 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 7.5E-47 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 7.5E-47 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 7.5E-47 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 7.5E-47 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 7.8E-64 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 1.0E-152 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 SUPERFAMILY SSF52096 5 316 3.08E-99 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PANTHER PTHR22855 1 318 6.5E-127 T 25-04-2016 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 PANTHER PTHR22855:SF42 1 318 6.5E-127 T 25-04-2016 SMD_RS06935 1f94e6038c9a95e436a19a746711d0f2 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.212 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS03010 170433b0082842827ae615ed539823b7 244 SMART SM00882 15 227 1.3E-96 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS03010 170433b0082842827ae615ed539823b7 244 Gene3D G3DSA:3.40.1080.10 13 226 2.0E-104 T 25-04-2016 SMD_RS03010 170433b0082842827ae615ed539823b7 244 PANTHER PTHR13707 5 242 2.3E-148 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS03010 170433b0082842827ae615ed539823b7 244 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 28 43 - T 25-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 SMD_RS03010 170433b0082842827ae615ed539823b7 244 SUPERFAMILY SSF100950 13 237 7.85E-91 T 25-04-2016 SMD_RS03010 170433b0082842827ae615ed539823b7 244 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 13 227 3.1E-82 T 25-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 SMD_RS03010 170433b0082842827ae615ed539823b7 244 Pfam PF01144 Coenzyme A transferase 16 227 1.5E-83 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 PANTHER PTHR11019 120 176 3.9E-36 T 25-04-2016 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 PANTHER PTHR11019 42 88 3.9E-36 T 25-04-2016 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 PANTHER PTHR11019 196 274 3.9E-36 T 25-04-2016 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 Gene3D G3DSA:3.40.50.880 19 279 5.1E-81 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 PANTHER PTHR11019:SF89 120 176 3.9E-36 T 25-04-2016 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 PANTHER PTHR11019:SF89 42 88 3.9E-36 T 25-04-2016 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 PANTHER PTHR11019:SF89 196 274 3.9E-36 T 25-04-2016 SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 SUPERFAMILY SSF52317 24 278 7.53E-55 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09860 0d39766e8fc52cde8c2ee5e2961bf867 279 Pfam PF17124 ThiJ/PfpI family-like 45 195 7.7E-15 T 25-04-2016 IPR032633 ThiJ/PfpI family-like SMD_RS12475 7b1de0769b64cdaeb8cb0459ce53b8af 209 PANTHER PTHR39206 1 206 6.3E-36 T 25-04-2016 SMD_RS12475 7b1de0769b64cdaeb8cb0459ce53b8af 209 PANTHER PTHR39206:SF1 1 206 6.3E-36 T 25-04-2016 SMD_RS12475 7b1de0769b64cdaeb8cb0459ce53b8af 209 SUPERFAMILY SSF52540 3 156 3.85E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12475 7b1de0769b64cdaeb8cb0459ce53b8af 209 Gene3D G3DSA:3.40.50.300 4 135 4.3E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 Pfam PF06481 COX Aromatic Rich Motif 240 287 1.1E-12 T 25-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 PANTHER PTHR22888 1 270 1.4E-124 T 25-04-2016 SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 Gene3D G3DSA:2.60.40.420 116 281 4.4E-34 T 25-04-2016 IPR008972 Cupredoxin SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 SUPERFAMILY SSF49503 121 283 7.44E-42 T 25-04-2016 IPR008972 Cupredoxin SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 PANTHER PTHR22888:SF13 1 270 1.4E-124 T 25-04-2016 SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 PIRSF PIRSF000292 5 314 3.2E-126 T 25-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 17 239 2.1E-106 T 25-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 Gene3D G3DSA:1.10.287.90 31 114 5.1E-35 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS06355 415f9ac3dd3160be0d293c340a69ff1e 346 SUPERFAMILY SSF81464 32 119 5.56E-23 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Gene3D G3DSA:3.40.50.970 438 604 2.7E-43 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Pfam PF00676 Dehydrogenase E1 component 69 373 4.6E-21 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 PANTHER PTHR11624:SF21 312 350 1.9E-54 T 25-04-2016 SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 PANTHER PTHR11624:SF21 416 734 1.9E-54 T 25-04-2016 SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 SUPERFAMILY SSF52518 60 379 1.12E-47 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Gene3D G3DSA:3.40.50.970 423 437 4.8E-72 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Gene3D G3DSA:3.40.50.970 52 389 4.8E-72 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 SMART SM00861 421 602 6.1E-29 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Pfam PF02779 Transketolase, pyrimidine binding domain 427 594 1.2E-19 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Gene3D G3DSA:3.40.50.920 638 749 1.5E-22 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 SUPERFAMILY SSF52518 427 608 2.19E-42 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 Pfam PF02780 Transketolase, C-terminal domain 635 737 3.2E-19 T 25-04-2016 IPR033248 Transketolase, C-terminal domain SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 PANTHER PTHR11624 312 350 1.9E-54 T 25-04-2016 IPR033247 Transketolase family SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 PANTHER PTHR11624 416 734 1.9E-54 T 25-04-2016 IPR033247 Transketolase family SMD_RS14515 bda1692c481f25aed533015b6ea60721 759 SUPERFAMILY SSF52922 626 746 3.53E-22 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 317 5.9E-29 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 SUPERFAMILY SSF52518 2 181 2.41E-43 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 SUPERFAMILY SSF52518 356 557 5.49E-53 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 Gene3D G3DSA:3.40.50.1220 183 339 3.4E-40 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 Gene3D G3DSA:3.40.50.970 347 548 3.0E-53 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 PANTHER PTHR18968:SF12 1 571 1.5E-287 T 25-04-2016 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 Gene3D G3DSA:3.40.50.970 2 176 2.9E-48 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 25-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 524 4.7E-34 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 2.8E-39 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 PANTHER PTHR18968 1 571 1.5E-287 T 25-04-2016 SMD_RS17355 2f56565ceeca46c07f21444dbe520a1e 572 SUPERFAMILY SSF52467 180 346 1.05E-41 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 SUPERFAMILY SSF50494 47 266 1.17E-29 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 SMART SM00020 3 261 2.8E-6 T 25-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 Gene3D G3DSA:2.40.10.10 128 220 7.6E-7 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PANTHER PTHR24256 48 93 1.7E-12 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PANTHER PTHR24256 115 269 1.7E-12 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 Pfam PF13365 Trypsin-like peptidase domain 47 228 2.4E-7 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 Gene3D G3DSA:2.40.10.10 48 127 2.4E-8 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 Gene3D G3DSA:2.40.10.10 221 266 1.8E-10 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PANTHER PTHR24256:SF125 48 93 1.7E-12 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PANTHER PTHR24256:SF125 115 269 1.7E-12 T 25-04-2016 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 116 130 9.3E-10 T 25-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 204 216 9.3E-10 T 25-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 SMD_RS11885 cc714d549b53289a225ffc63ffdba8ae 271 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 48 63 9.3E-10 T 25-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 SUPERFAMILY SSF47616 84 198 8.91E-17 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 SUPERFAMILY SSF52833 4 87 8.47E-21 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 77 2.1E-12 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 Gene3D G3DSA:3.40.30.10 6 88 8.1E-24 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 Pfam PF13410 Glutathione S-transferase, C-terminal domain 133 186 5.3E-8 T 25-04-2016 SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 Gene3D G3DSA:1.20.1050.10 89 189 9.3E-17 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 PANTHER PTHR11260:SF253 4 203 7.0E-57 T 25-04-2016 SMD_RS07470 918945b2dbc2f77189857209bc2bc05e 205 PANTHER PTHR11260 4 203 7.0E-57 T 25-04-2016 SMD_RS16185 18b09a47df46f5a8951b318eb5888440 184 Gene3D G3DSA:3.40.50.2020 11 184 7.8E-47 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS16185 18b09a47df46f5a8951b318eb5888440 184 Pfam PF00156 Phosphoribosyl transferase domain 16 170 6.3E-22 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMD_RS16185 18b09a47df46f5a8951b318eb5888440 184 PANTHER PTHR22573 16 184 8.8E-45 T 25-04-2016 SMD_RS16185 18b09a47df46f5a8951b318eb5888440 184 PANTHER PTHR22573:SF56 16 184 8.8E-45 T 25-04-2016 SMD_RS16185 18b09a47df46f5a8951b318eb5888440 184 SUPERFAMILY SSF53271 7 183 1.57E-42 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMD_RS03720 298e77bf8c3d31735bd2df24d994350c 295 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMD_RS03720 298e77bf8c3d31735bd2df24d994350c 295 PANTHER PTHR30589 1 295 5.9E-98 T 25-04-2016 SMD_RS03720 298e77bf8c3d31735bd2df24d994350c 295 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 275 4.6E-74 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMD_RS03720 298e77bf8c3d31735bd2df24d994350c 295 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 279 6.2E-74 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMD_RS03720 298e77bf8c3d31735bd2df24d994350c 295 PANTHER PTHR30589:SF0 1 295 5.9E-98 T 25-04-2016 SMD_RS03720 298e77bf8c3d31735bd2df24d994350c 295 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 281 18.981 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 TIGRFAM TIGR01351 adk: adenylate kinase 2 128 1.0E-50 T 25-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 Pfam PF00406 Adenylate kinase 5 162 2.7E-58 T 25-04-2016 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 PRINTS PR00094 Adenylate kinase signature 150 164 3.1E-36 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 PRINTS PR00094 Adenylate kinase signature 81 97 3.1E-36 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 PRINTS PR00094 Adenylate kinase signature 32 46 3.1E-36 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 PRINTS PR00094 Adenylate kinase signature 133 148 3.1E-36 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 PRINTS PR00094 Adenylate kinase signature 4 17 3.1E-36 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 SUPERFAMILY SSF52540 1 186 1.97E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 PANTHER PTHR23359 1 185 5.5E-85 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 Gene3D G3DSA:3.40.50.300 1 184 4.1E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18105 5cfbca2627be97166f801419a57d352f 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 46.431 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMD_RS10140 3839ddb41dbc3018f6863ecd734b248c 154 SUPERFAMILY SSF55729 1 139 8.72E-30 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10140 3839ddb41dbc3018f6863ecd734b248c 154 Gene3D G3DSA:3.40.630.30 5 142 7.8E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10140 3839ddb41dbc3018f6863ecd734b248c 154 Pfam PF00583 Acetyltransferase (GNAT) family 62 136 1.3E-16 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS10140 3839ddb41dbc3018f6863ecd734b248c 154 PANTHER PTHR23091 40 140 8.4E-17 T 25-04-2016 SMD_RS09420 1436155355108bc635268770c374bc9b 413 SUPERFAMILY SSF56349 106 388 1.24E-57 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS09420 1436155355108bc635268770c374bc9b 413 PANTHER PTHR30629 2 407 5.9E-120 T 25-04-2016 SMD_RS09420 1436155355108bc635268770c374bc9b 413 Gene3D G3DSA:1.10.150.130 106 201 8.8E-16 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS09420 1436155355108bc635268770c374bc9b 413 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 1.0E-18 T 25-04-2016 IPR025166 Domain of unknown function DUF4102 SMD_RS09420 1436155355108bc635268770c374bc9b 413 Gene3D G3DSA:1.10.443.10 215 383 1.4E-22 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS09420 1436155355108bc635268770c374bc9b 413 Pfam PF00589 Phage integrase family 215 365 3.4E-14 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS09420 1436155355108bc635268770c374bc9b 413 PANTHER PTHR30629:SF3 2 407 5.9E-120 T 25-04-2016 SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 Gene3D G3DSA:3.40.50.300 52 152 6.1E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 SUPERFAMILY SSF52540 52 182 1.36E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 28 320 1.1E-70 T 25-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 337 38.242 T 25-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 PANTHER PTHR30160:SF13 11 337 7.6E-99 T 25-04-2016 SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 PANTHER PTHR30160 11 337 7.6E-99 T 25-04-2016 SMD_RS07670 0463de7122836f19370c7e66c0bc82b1 339 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 333 3.8E-108 T 25-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 116 19.095 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 113 3.3E-24 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 Gene3D G3DSA:3.30.300.20 5 112 2.2E-32 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 Pfam PF02033 Ribosome-binding factor A 7 109 2.9E-26 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 25-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 PANTHER PTHR33515 1 127 4.8E-35 T 25-04-2016 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 96 1.0E-35 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMD_RS15385 bd699a4ee251889f1cc9389340922fdb 127 SUPERFAMILY SSF89919 4 112 3.01E-27 T 25-04-2016 IPR023799 Ribosome-binding factor A domain SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 SMART SM00240 4 54 7.1E-6 T 25-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 PANTHER PTHR30258:SF3 102 532 4.7E-121 T 25-04-2016 SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 PANTHER PTHR30258 102 532 4.7E-121 T 25-04-2016 SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 Gene3D G3DSA:2.60.200.20 3 78 8.1E-13 T 25-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 Gene3D G3DSA:3.30.450.90 198 295 4.8E-35 T 25-04-2016 SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 Gene3D G3DSA:3.40.50.300 303 513 3.0E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 SUPERFAMILY SSF49879 4 77 4.56E-13 T 25-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 3 79 4.8E-9 T 25-04-2016 IPR032030 YscD, cytoplasmic domain SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 SUPERFAMILY SSF52540 189 484 2.05E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05030 7d64ac084763deba81f610eb357e9a57 556 Pfam PF00437 Type II/IV secretion system protein 201 477 3.5E-85 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS06130 30f1a38db21b62c9d67003ba826cf045 398 Pfam PF07730 Histidine kinase 197 259 6.3E-14 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMD_RS06130 30f1a38db21b62c9d67003ba826cf045 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 383 6.1E-5 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06130 30f1a38db21b62c9d67003ba826cf045 398 SUPERFAMILY SSF55874 276 382 7.94E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06130 30f1a38db21b62c9d67003ba826cf045 398 PANTHER PTHR24421:SF15 108 398 7.9E-78 T 25-04-2016 SMD_RS06130 30f1a38db21b62c9d67003ba826cf045 398 Gene3D G3DSA:3.30.565.10 263 383 3.5E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06130 30f1a38db21b62c9d67003ba826cf045 398 PANTHER PTHR24421 108 398 7.9E-78 T 25-04-2016 SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 PANTHER PTHR21294:SF6 1 248 6.5E-156 T 25-04-2016 SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 SUPERFAMILY SSF52402 1 244 4.28E-79 T 25-04-2016 SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.6E-42 T 25-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 Gene3D G3DSA:3.40.50.620 1 244 8.6E-94 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 PANTHER PTHR21294 1 248 6.5E-156 T 25-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 SMART SM00893 23 211 9.0E-58 T 25-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMD_RS02975 11f5b9f557c7f9936cf48c9ef037d82e 248 PIRSF PIRSF000090 1 248 1.5E-81 T 25-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 PANTHER PTHR11014:SF75 6 358 3.6E-136 T 25-04-2016 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 Pfam PF01546 Peptidase family M20/M25/M40 64 359 1.5E-18 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 Gene3D G3DSA:3.40.630.10 3 171 9.3E-43 T 25-04-2016 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 Gene3D G3DSA:3.40.630.10 303 359 9.3E-43 T 25-04-2016 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 Gene3D G3DSA:3.30.70.360 172 265 8.6E-12 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 SUPERFAMILY SSF53187 2 162 3.14E-35 T 25-04-2016 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 SUPERFAMILY SSF53187 284 359 3.14E-35 T 25-04-2016 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 SUPERFAMILY SSF55031 162 266 1.55E-10 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 PANTHER PTHR11014 6 358 3.6E-136 T 25-04-2016 SMD_RS14950 8f095555d5dc00d5fc23746993414afb 362 Pfam PF07687 Peptidase dimerisation domain 160 267 7.0E-14 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PRINTS PR00723 Subtilisin serine protease family (S8) signature 121 134 1.52E-11 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PRINTS PR00723 Subtilisin serine protease family (S8) signature 313 329 1.52E-11 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PRINTS PR00723 Subtilisin serine protease family (S8) signature 80 99 1.52E-11 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS16120 787a596ab878f267aced706ada059c0b 947 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 314 324 - T 25-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PANTHER PTHR10795 68 388 4.0E-25 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PANTHER PTHR10795 663 674 4.0E-25 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS16120 787a596ab878f267aced706ada059c0b 947 SMART SM00869 682 938 1.6E-18 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS16120 787a596ab878f267aced706ada059c0b 947 Pfam PF03797 Autotransporter beta-domain 683 929 5.0E-24 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS16120 787a596ab878f267aced706ada059c0b 947 Gene3D G3DSA:3.40.50.200 54 375 8.0E-58 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PANTHER PTHR10795:SF368 68 388 4.0E-25 T 25-04-2016 SMD_RS16120 787a596ab878f267aced706ada059c0b 947 PANTHER PTHR10795:SF368 663 674 4.0E-25 T 25-04-2016 SMD_RS16120 787a596ab878f267aced706ada059c0b 947 Gene3D G3DSA:2.40.128.130 656 937 2.8E-32 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS16120 787a596ab878f267aced706ada059c0b 947 SUPERFAMILY SSF103515 647 933 4.71E-31 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS16120 787a596ab878f267aced706ada059c0b 947 Pfam PF00082 Subtilase family 80 364 4.2E-34 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS16120 787a596ab878f267aced706ada059c0b 947 SUPERFAMILY SSF52743 62 376 4.84E-57 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS16120 787a596ab878f267aced706ada059c0b 947 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 125 135 - T 25-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SMD_RS16120 787a596ab878f267aced706ada059c0b 947 Pfam PF12951 Passenger-associated-transport-repeat 406 435 2.4E-10 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS16120 787a596ab878f267aced706ada059c0b 947 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 85 95 - T 25-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SMD_RS16120 787a596ab878f267aced706ada059c0b 947 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 405 435 2.2E-12 T 25-04-2016 IPR013425 Autotransporter-associated beta strand repeat SMD_RS01630 ce6b5d4c16e09d0045e729966defc7d4 310 PANTHER PTHR11935 4 232 5.7E-56 T 25-04-2016 SMD_RS01630 ce6b5d4c16e09d0045e729966defc7d4 310 SUPERFAMILY SSF56281 4 273 1.83E-50 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS01630 ce6b5d4c16e09d0045e729966defc7d4 310 SMART SM00849 19 224 2.7E-28 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS01630 ce6b5d4c16e09d0045e729966defc7d4 310 Gene3D G3DSA:3.60.15.10 22 236 6.7E-40 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS01630 ce6b5d4c16e09d0045e729966defc7d4 310 Pfam PF00753 Metallo-beta-lactamase superfamily 21 196 3.4E-23 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS01630 ce6b5d4c16e09d0045e729966defc7d4 310 PANTHER PTHR11935:SF28 4 232 5.7E-56 T 25-04-2016 SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 PANTHER PTHR30486:SF6 1 345 2.6E-202 T 25-04-2016 SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 SUPERFAMILY SSF52540 5 336 2.66E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 PANTHER PTHR30486 1 345 2.6E-202 T 25-04-2016 SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 SMART SM00382 122 248 9.3E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 Gene3D G3DSA:3.40.50.300 100 339 7.7E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 Pfam PF00437 Type II/IV secretion system protein 12 268 3.9E-48 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS05335 1b9b40053dd5bdcf7d19db8e12a228a5 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 2.9E-157 T 25-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 Gene3D G3DSA:1.10.10.10 3 85 6.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 PANTHER PTHR30537:SF7 1 310 1.5E-127 T 25-04-2016 SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 PANTHER PTHR30537 1 310 1.5E-127 T 25-04-2016 SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 SUPERFAMILY SSF46785 4 86 2.18E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 Gene3D G3DSA:3.40.190.10 172 260 3.4E-18 T 25-04-2016 SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 Gene3D G3DSA:3.40.190.10 90 171 1.0E-22 T 25-04-2016 SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 Pfam PF03466 LysR substrate binding domain 87 290 6.0E-44 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 SUPERFAMILY SSF53850 87 297 8.51E-45 T 25-04-2016 SMD_RS12415 04a71e14b1c2893d399899d582181a4a 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.8E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS08205 76e50bafdd230fa75ddb1fe8555a8f21 146 PIRSF PIRSF002070 1 146 9.7E-27 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMD_RS08205 76e50bafdd230fa75ddb1fe8555a8f21 146 SUPERFAMILY SSF50249 2 134 1.75E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS08205 76e50bafdd230fa75ddb1fe8555a8f21 146 Pfam PF00436 Single-strand binding protein family 5 109 2.2E-12 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SMD_RS08205 76e50bafdd230fa75ddb1fe8555a8f21 146 Gene3D G3DSA:2.40.50.140 3 113 1.0E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 SUPERFAMILY SSF111369 155 212 7.85E-5 T 25-04-2016 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 Gene3D G3DSA:2.40.50.100 88 117 3.6E-19 T 25-04-2016 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 Gene3D G3DSA:2.40.50.100 248 281 3.6E-19 T 25-04-2016 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 SUPERFAMILY SSF111369 87 166 8.37E-12 T 25-04-2016 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 PANTHER PTHR30386 45 383 5.1E-87 T 25-04-2016 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 326 6.8E-16 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 95 115 6.8E-7 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 381 6.8E-7 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 PANTHER PTHR30386:SF0 45 383 5.1E-87 T 25-04-2016 SMD_RS06720 2039d04ec51cbea70f0297d1b1e40fd2 384 SUPERFAMILY SSF111369 222 296 2.75E-10 T 25-04-2016 SMD_RS01675 2d9b6b285ac44cda3fd5aab5e76ff1b9 385 PANTHER PTHR30489 1 385 9.9E-171 T 25-04-2016 SMD_RS01675 2d9b6b285ac44cda3fd5aab5e76ff1b9 385 Pfam PF02687 FtsX-like permease family 265 376 5.6E-14 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS01675 2d9b6b285ac44cda3fd5aab5e76ff1b9 385 Pfam PF12704 MacB-like periplasmic core domain 23 229 5.5E-7 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS01675 2d9b6b285ac44cda3fd5aab5e76ff1b9 385 PANTHER PTHR30489:SF11 1 385 9.9E-171 T 25-04-2016 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 1.1E-30 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 TIGRFAM TIGR00492 alr: alanine racemase 3 355 7.5E-102 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PANTHER PTHR30511:SF0 1 355 3.7E-142 T 25-04-2016 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 25-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 25 41 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 286 303 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 120 132 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 265 280 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 191 218 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 154 165 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 60 78 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PRINTS PR00992 Alanine racemase signature 248 263 8.4E-60 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 1.5E-69 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 SUPERFAMILY SSF51419 8 233 1.83E-71 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 SUPERFAMILY SSF50621 228 350 9.07E-38 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 Gene3D G3DSA:2.40.37.10 212 355 1.9E-46 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 PANTHER PTHR30511 1 355 3.7E-142 T 25-04-2016 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 Hamap MF_01201 Alanine racemase. 1 355 33.14 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 Gene3D G3DSA:3.20.20.10 10 211 4.8E-69 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS02670 9d89ff1df7df077778a587f57d17e5ec 355 SMART SM01005 232 355 1.2E-48 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 PRINTS PR01021 OMPA domain signature 254 276 1.6E-18 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 PRINTS PR01021 OMPA domain signature 299 315 1.6E-18 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 PRINTS PR01021 OMPA domain signature 284 299 1.6E-18 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 PANTHER PTHR30128 25 363 1.7E-123 T 25-04-2016 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 SUPERFAMILY SSF103088 251 361 6.54E-36 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 Gene3D G3DSA:3.30.1330.60 250 361 3.4E-39 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 Gene3D G3DSA:2.40.160.20 14 207 4.8E-18 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 87 170 5.4E-4 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 SUPERFAMILY SSF103647 209 248 1.44E-5 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 Pfam PF00691 OmpA family 253 344 2.7E-22 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 Pfam PF13505 Outer membrane protein beta-barrel domain 8 187 2.0E-20 T 25-04-2016 IPR027385 Outer membrane protein beta-barrel SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 SUPERFAMILY SSF56925 27 187 5.49E-18 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS04390 dd68664b2c450608d83cd0dc3c38441d 363 PANTHER PTHR30128:SF10 25 363 1.7E-123 T 25-04-2016 SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 Gene3D G3DSA:2.120.10.30 276 461 4.3E-20 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 Gene3D G3DSA:2.120.10.30 165 253 6.7E-7 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 SUPERFAMILY SSF101898 229 467 3.92E-25 T 25-04-2016 SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 Gene3D G3DSA:3.40.30.10 4 144 1.8E-20 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 PANTHER PTHR13833:SF38 1 423 7.4E-82 T 25-04-2016 SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 PANTHER PTHR13833 1 423 7.4E-82 T 25-04-2016 SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 SUPERFAMILY SSF63829 165 245 1.44E-5 T 25-04-2016 SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 SUPERFAMILY SSF52833 4 140 4.22E-19 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07685 77ac9e72c3d1b3dc6ed2f9fdb7655384 470 Pfam PF01436 NHL repeat 165 188 8.1E-5 T 25-04-2016 IPR001258 NHL repeat GO:0005515 SMD_RS08110 31b85be40afb98518ce0af6da7c22bd6 213 Pfam PF01526 Tn3 transposase DDE domain 42 191 6.2E-63 T 25-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 SMD_RS18265 59e39f20f538695d584bdf75b679e929 259 Pfam PF08241 Methyltransferase domain 49 136 1.9E-19 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS18265 59e39f20f538695d584bdf75b679e929 259 Gene3D G3DSA:3.40.50.150 36 258 6.2E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18265 59e39f20f538695d584bdf75b679e929 259 SUPERFAMILY SSF53335 22 197 1.02E-36 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18265 59e39f20f538695d584bdf75b679e929 259 PANTHER PTHR10108:SF705 38 191 4.7E-27 T 25-04-2016 SMD_RS18265 59e39f20f538695d584bdf75b679e929 259 PANTHER PTHR10108 38 191 4.7E-27 T 25-04-2016 SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 SUPERFAMILY SSF46689 3 80 1.15E-20 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 25-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 PANTHER PTHR30055 1 196 2.3E-26 T 25-04-2016 SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.4E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 7.4E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 SUPERFAMILY SSF48498 89 172 2.97E-6 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 Gene3D G3DSA:1.10.357.10 4 173 7.6E-36 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS10080 1802eb80bbd11ced0a3e8314422e9825 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 6.0E-17 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 SUPERFAMILY SSF51905 8 214 2.47E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 325 2.6E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 SUPERFAMILY SSF51905 162 338 4.73E-23 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 Gene3D G3DSA:3.50.50.60 110 330 5.8E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 Gene3D G3DSA:3.50.50.60 7 109 1.0E-23 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PANTHER PTHR22912 9 40 1.6E-27 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PANTHER PTHR22912 58 181 1.6E-27 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PANTHER PTHR22912 197 330 1.6E-27 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.8E-10 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.8E-10 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 2.8E-10 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.8E-6 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 1.8E-6 T 25-04-2016 SMD_RS19740 7bb46cece8f356f3647964e1c167bc89 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.8E-6 T 25-04-2016 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 Gene3D G3DSA:3.40.605.10 381 422 8.6E-95 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 Gene3D G3DSA:3.40.605.10 6 230 8.6E-95 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 PIRSF PIRSF000151 4 423 3.3E-169 T 25-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 329 350 - T 25-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 11 422 41.119 T 25-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 SUPERFAMILY SSF53720 9 422 1.14E-112 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 20 410 3.7E-140 T 25-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 Pfam PF00171 Aldehyde dehydrogenase family 10 289 4.2E-15 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 PANTHER PTHR11063:SF8 9 422 1.2E-168 T 25-04-2016 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 PANTHER PTHR11063 9 422 1.2E-168 T 25-04-2016 SMD_RS14915 2d2a2a5597248b9caa9a1b3f94b1bcf4 423 Gene3D G3DSA:3.40.309.10 233 380 2.7E-42 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS10630 2de34af7ef2c63c1f78d9001c6afa8a4 516 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 25-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 SMD_RS10630 2de34af7ef2c63c1f78d9001c6afa8a4 516 PANTHER PTHR30047:SF6 13 510 4.4E-230 T 25-04-2016 SMD_RS10630 2de34af7ef2c63c1f78d9001c6afa8a4 516 PANTHER PTHR30047 13 510 4.4E-230 T 25-04-2016 SMD_RS10630 2de34af7ef2c63c1f78d9001c6afa8a4 516 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 18 509 6.1E-166 T 25-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SMD_RS10630 2de34af7ef2c63c1f78d9001c6afa8a4 516 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 510 7.9E-146 T 25-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 Gene3D G3DSA:3.90.550.10 4 253 5.1E-71 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 SUPERFAMILY SSF53448 4 250 1.57E-55 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 252 38.693 T 25-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 Pfam PF02348 Cytidylyltransferase 6 222 9.7E-45 T 25-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 PANTHER PTHR21485:SF4 3 253 4.1E-98 T 25-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 PANTHER PTHR21485 3 253 4.1E-98 T 25-04-2016 SMD_RS07675 167b0e96b2ef40106c0d3ef93fbf0ca5 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 245 8.5E-79 T 25-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 PANTHER PTHR21089:SF2 1 280 7.9E-115 T 25-04-2016 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 Gene3D G3DSA:3.40.192.10 2 107 2.9E-36 T 25-04-2016 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 PANTHER PTHR21089 1 280 7.9E-115 T 25-04-2016 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 3.3E-70 T 25-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.8E-24 T 25-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 193 3.5E-11 T 25-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 SUPERFAMILY SSF53223 2 101 8.06E-29 T 25-04-2016 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 Gene3D G3DSA:3.40.50.720 108 248 1.9E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 273 30.663 T 25-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS20990 675a088050ab6f18f3430033ceda6118 281 SUPERFAMILY SSF51735 102 270 2.49E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Pfam PF00873 AcrB/AcrD/AcrF family 6 1014 1.6E-284 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82714 712 791 5.62E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Gene3D G3DSA:3.30.2090.10 181 266 4.2E-16 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Gene3D G3DSA:3.30.2090.10 712 790 2.0E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Gene3D G3DSA:3.30.70.1440 662 707 4.1E-7 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 1.7E-61 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82693 557 649 4.19E-5 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Gene3D G3DSA:3.30.70.1430 40 139 1.0E-27 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82866 290 489 6.67E-47 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82714 182 265 1.57E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Gene3D G3DSA:1.10.3850.10 800 1014 3.8E-44 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82693 40 134 2.88E-23 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 Gene3D G3DSA:1.20.1640.10 287 495 1.7E-56 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82866 795 1015 7.85E-39 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82693 135 181 7.06E-21 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 SUPERFAMILY SSF82693 268 324 7.06E-21 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PANTHER PTHR32063:SF34 1 1039 0.0 T 25-04-2016 SMD_RS20120 7142c6013e9f7587af6c64ef17f6e5ce 1040 PANTHER PTHR32063 1 1039 0.0 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 181 5.4E-11 T 25-04-2016 IPR024478 4HB MCP domain SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 498 692 9.9E-54 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 Gene3D G3DSA:1.10.287.950 461 665 3.8E-53 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 PANTHER PTHR32089:SF63 428 696 4.3E-116 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 PANTHER PTHR32089:SF63 170 246 4.3E-116 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 SMART SM00304 212 264 1.1E-7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 SMART SM00304 303 354 14.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 SMART SM00304 393 445 2.7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 Pfam PF00672 HAMP domain 192 260 1.9E-11 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 SMART SM00283 446 693 2.6E-77 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 SUPERFAMILY SSF158472 212 261 1.83E-6 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 SUPERFAMILY SSF58104 413 694 4.32E-62 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 PANTHER PTHR32089 428 696 4.3E-116 T 25-04-2016 SMD_RS16390 e35a3560aaad7fe3594afc2e97074f0c 707 PANTHER PTHR32089 170 246 4.3E-116 T 25-04-2016 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Pfam PF02237 Biotin protein ligase C terminal domain 276 320 4.7E-8 T 25-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 SUPERFAMILY SSF55681 82 271 1.44E-47 T 25-04-2016 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 SUPERFAMILY SSF46785 6 55 5.09E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Gene3D G3DSA:3.30.930.10 81 271 1.1E-48 T 25-04-2016 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 85 319 1.8E-47 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 2 320 30.619 T 25-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 99 208 4.1E-9 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Pfam PF08279 HTH domain 5 53 2.3E-10 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Gene3D G3DSA:2.30.30.100 275 321 9.7E-12 T 25-04-2016 SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 SUPERFAMILY SSF50037 275 320 2.33E-8 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 Gene3D G3DSA:1.10.10.10 5 57 1.4E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01535 c10e296bb0ce76305b434586a3ce1654 322 PANTHER PTHR12835 4 320 4.0E-71 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SMD_RS13965 28298725b601b48beccdfa279f41e0df 357 Gene3D G3DSA:1.25.40.20 228 297 1.9E-4 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13965 28298725b601b48beccdfa279f41e0df 357 Gene3D G3DSA:1.25.40.20 33 86 1.9E-4 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13965 28298725b601b48beccdfa279f41e0df 357 SUPERFAMILY SSF48403 213 299 2.04E-5 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain SMD_RS13965 28298725b601b48beccdfa279f41e0df 357 Pfam PF14025 Protein of unknown function (DUF4241) 33 204 1.2E-33 T 25-04-2016 IPR025335 Protein of unknown function DUF4241 SMD_RS12915 acf21ce8f64bf144c0f3934287f9b280 148 SMART SM01321 13 127 2.2E-32 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS12915 acf21ce8f64bf144c0f3934287f9b280 148 Gene3D G3DSA:3.30.70.1290 2 130 1.4E-18 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS12915 acf21ce8f64bf144c0f3934287f9b280 148 PANTHER PTHR36966 1 148 2.2E-24 T 25-04-2016 SMD_RS12915 acf21ce8f64bf144c0f3934287f9b280 148 Pfam PF01797 Transposase IS200 like 18 124 4.2E-13 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS12915 acf21ce8f64bf144c0f3934287f9b280 148 SUPERFAMILY SSF143422 6 133 2.75E-28 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS12915 acf21ce8f64bf144c0f3934287f9b280 148 PANTHER PTHR36966:SF1 1 148 2.2E-24 T 25-04-2016 SMD_RS03545 d392fbd96cf5808f4e3f05598544b66f 211 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 208 4.8E-13 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS03545 d392fbd96cf5808f4e3f05598544b66f 211 SUPERFAMILY SSF74653 126 189 2.49E-14 T 25-04-2016 SMD_RS03545 d392fbd96cf5808f4e3f05598544b66f 211 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 131 208 4.0E-14 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS03545 d392fbd96cf5808f4e3f05598544b66f 211 Gene3D G3DSA:3.30.1150.10 132 193 4.9E-8 T 25-04-2016 SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 7 156 33.848 T 25-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 PANTHER PTHR12029:SF31 7 157 6.1E-69 T 25-04-2016 SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 PIRSF PIRSF029256 6 159 7.5E-64 T 25-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 PANTHER PTHR12029 7 157 6.1E-69 T 25-04-2016 SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 Pfam PF00588 SpoU rRNA Methylase family 7 147 7.3E-33 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 SUPERFAMILY SSF75217 7 157 7.85E-44 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS01050 233a4a52a9c3eed2f4f4405d9daf1d68 159 Gene3D G3DSA:3.40.1280.10 4 158 1.0E-64 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS06125 dbd64ede2a30a2aded903040fe23ec1f 198 PIRSF PIRSF028520 1 165 1.4E-73 T 25-04-2016 IPR016890 Uncharacterised conserved protein UCP028520 SMD_RS06125 dbd64ede2a30a2aded903040fe23ec1f 198 SUPERFAMILY SSF55729 2 150 5.77E-16 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06125 dbd64ede2a30a2aded903040fe23ec1f 198 Pfam PF00583 Acetyltransferase (GNAT) family 48 142 6.0E-7 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS06125 dbd64ede2a30a2aded903040fe23ec1f 198 Gene3D G3DSA:3.40.630.30 1 147 3.1E-15 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 Gene3D G3DSA:1.10.10.10 7 72 9.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 SUPERFAMILY SSF46785 3 74 6.47E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 Pfam PF00155 Aminotransferase class I and II 138 448 9.9E-38 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 Gene3D G3DSA:3.90.1150.10 352 443 3.4E-7 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 SMART SM00345 11 70 2.0E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 PANTHER PTHR11751 80 459 7.9E-137 T 25-04-2016 SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 PANTHER PTHR11751:SF386 80 459 7.9E-137 T 25-04-2016 SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 1.9E-14 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 SUPERFAMILY SSF53383 85 456 4.84E-83 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS05270 ac1d81ef22263584ea40a3402b2045bd 459 Gene3D G3DSA:3.40.640.10 134 351 6.9E-59 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Pfam PF00873 AcrB/AcrD/AcrF family 8 1041 5.8E-164 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PANTHER PTHR32063 3 498 0.0 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Gene3D G3DSA:1.10.3850.10 277 487 2.9E-44 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Gene3D G3DSA:1.10.3850.10 832 1045 3.7E-51 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82866 304 487 1.11E-36 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82714 742 828 5.49E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82693 140 185 2.09E-18 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82693 271 326 2.09E-18 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82866 824 1048 2.22E-45 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82693 43 139 1.24E-18 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PANTHER PTHR32063 532 1050 0.0 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Gene3D G3DSA:3.30.70.1430 593 669 2.8E-6 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Gene3D G3DSA:3.30.2090.10 187 270 1.5E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Gene3D G3DSA:3.30.70.1430 43 141 1.7E-18 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82714 188 267 3.27E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 SUPERFAMILY SSF82693 592 684 6.28E-7 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 Gene3D G3DSA:3.30.2090.10 742 828 4.4E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 4.5E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 4.5E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 4.5E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 4.5E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 4.5E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PANTHER PTHR32063:SF18 3 498 0.0 T 25-04-2016 SMD_RS18295 0dbf3530383a8cc00152f6f5fda1b994 1053 PANTHER PTHR32063:SF18 532 1050 0.0 T 25-04-2016 SMD_RS06525 fc80344808161451346a9d3a4c5572c4 395 PANTHER PTHR30294:SF19 5 393 9.7E-45 T 25-04-2016 SMD_RS06525 fc80344808161451346a9d3a4c5572c4 395 PANTHER PTHR30294 5 393 9.7E-45 T 25-04-2016 SMD_RS06525 fc80344808161451346a9d3a4c5572c4 395 Pfam PF12698 ABC-2 family transporter protein 31 371 2.5E-33 T 25-04-2016 SMD_RS01145 b49cb0a138346bce2d1a191deafb98b6 247 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 66 80 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS01145 b49cb0a138346bce2d1a191deafb98b6 247 PANTHER PTHR11079:SF60 16 243 1.4E-68 T 25-04-2016 SMD_RS01145 b49cb0a138346bce2d1a191deafb98b6 247 PANTHER PTHR11079 16 243 1.4E-68 T 25-04-2016 SMD_RS01145 b49cb0a138346bce2d1a191deafb98b6 247 Pfam PF00849 RNA pseudouridylate synthase 27 178 9.5E-28 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS01145 b49cb0a138346bce2d1a191deafb98b6 247 SUPERFAMILY SSF55120 14 244 1.15E-49 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 25-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 SUPERFAMILY SSF56655 5 262 8.51E-78 T 25-04-2016 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 Pfam PF00459 Inositol monophosphatase family 4 254 1.2E-62 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 7.8E-54 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 7.8E-54 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 7.8E-54 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 7.8E-54 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 7.8E-54 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 7.8E-54 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PANTHER PTHR20854:SF4 1 261 5.0E-88 T 25-04-2016 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 Gene3D G3DSA:3.30.540.10 5 149 3.3E-45 T 25-04-2016 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 Gene3D G3DSA:3.40.190.80 150 262 1.1E-34 T 25-04-2016 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 25-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 1.5E-17 T 25-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 1.5E-17 T 25-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 1.5E-17 T 25-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 1.5E-17 T 25-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SMD_RS15045 d9a3d0696a076a90604f198a548971d8 275 PANTHER PTHR20854 1 261 5.0E-88 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMD_RS03775 80b4098d676d028a1b66ca36d2170570 184 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 178 4.4E-58 T 25-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SMD_RS03775 80b4098d676d028a1b66ca36d2170570 184 Pfam PF01923 Cobalamin adenosyltransferase 8 165 7.1E-58 T 25-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SMD_RS03775 80b4098d676d028a1b66ca36d2170570 184 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 177 1.0E-45 T 25-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SMD_RS03775 80b4098d676d028a1b66ca36d2170570 184 SUPERFAMILY SSF89028 7 178 2.16E-59 T 25-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SMD_RS03775 80b4098d676d028a1b66ca36d2170570 184 Gene3D G3DSA:1.20.1200.10 18 181 1.5E-64 T 25-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SMD_RS03775 80b4098d676d028a1b66ca36d2170570 184 PANTHER PTHR12213 4 178 2.5E-71 T 25-04-2016 SMD_RS14865 8be01f1519d917f96fd5b175e08bb83e 529 PANTHER PTHR30365:SF0 378 521 8.3E-252 T 25-04-2016 SMD_RS14865 8be01f1519d917f96fd5b175e08bb83e 529 PANTHER PTHR30365:SF0 1 312 8.3E-252 T 25-04-2016 SMD_RS14865 8be01f1519d917f96fd5b175e08bb83e 529 PANTHER PTHR30365 378 521 8.3E-252 T 25-04-2016 SMD_RS14865 8be01f1519d917f96fd5b175e08bb83e 529 PANTHER PTHR30365 1 312 8.3E-252 T 25-04-2016 SMD_RS14865 8be01f1519d917f96fd5b175e08bb83e 529 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 4.6E-179 T 25-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SMD_RS04235 3febc3a9cccd380aecdc78ef6bf11aca 101 PANTHER PTHR19836 1 101 2.9E-55 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04235 3febc3a9cccd380aecdc78ef6bf11aca 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.1E-23 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04235 3febc3a9cccd380aecdc78ef6bf11aca 101 Gene3D G3DSA:4.10.830.10 42 101 1.4E-27 T 25-04-2016 SMD_RS04235 3febc3a9cccd380aecdc78ef6bf11aca 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.502 T 25-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SMD_RS04235 3febc3a9cccd380aecdc78ef6bf11aca 101 SUPERFAMILY SSF57716 2 101 5.13E-35 T 25-04-2016 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 36 406 9.5E-119 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 27 440 39.534 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PANTHER PTHR11706 6 442 6.3E-207 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 352 369 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 143 162 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 115 141 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 168 189 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 324 343 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 384 403 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 PRINTS PR00447 Natural resistance-associated macrophage protein signature 220 243 8.5E-58 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS13020 73b93f16fbf2b37b2d6cacca0b0dbe6e 443 Pfam PF01566 Natural resistance-associated macrophage protein 56 412 7.9E-132 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMD_RS21950 862f3ecb5ec4f2f224c00bd68699bd0e 368 PANTHER PTHR23344 36 363 2.2E-103 T 25-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SMD_RS21950 862f3ecb5ec4f2f224c00bd68699bd0e 368 SUPERFAMILY SSF51695 31 360 7.33E-75 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SMD_RS21950 862f3ecb5ec4f2f224c00bd68699bd0e 368 Gene3D G3DSA:3.20.20.190 32 360 7.5E-84 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SMD_RS21950 862f3ecb5ec4f2f224c00bd68699bd0e 368 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 37 354 5.2E-47 T 25-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SMD_RS21950 862f3ecb5ec4f2f224c00bd68699bd0e 368 PANTHER PTHR23344:SF7 36 363 2.2E-103 T 25-04-2016 SMD_RS02420 8d35477e362930c7fcc4a06fda8fdd7a 319 PANTHER PTHR11562:SF40 10 317 9.9E-156 T 25-04-2016 SMD_RS02420 8d35477e362930c7fcc4a06fda8fdd7a 319 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 317 3.7E-64 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS02420 8d35477e362930c7fcc4a06fda8fdd7a 319 PANTHER PTHR11562 10 317 9.9E-156 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS02420 8d35477e362930c7fcc4a06fda8fdd7a 319 Gene3D G3DSA:1.20.1510.10 24 243 1.5E-49 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMD_RS02420 8d35477e362930c7fcc4a06fda8fdd7a 319 SUPERFAMILY SSF161111 22 244 1.44E-48 T 25-04-2016 SMD_RS02420 8d35477e362930c7fcc4a06fda8fdd7a 319 Pfam PF01545 Cation efflux family 28 243 3.5E-38 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 467 7.5E-122 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 PANTHER PTHR30203 9 469 6.2E-154 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Pfam PF02321 Outer membrane efflux protein 281 464 1.7E-28 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Pfam PF02321 Outer membrane efflux protein 65 255 1.1E-26 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 PANTHER PTHR30203:SF15 9 469 6.2E-154 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Gene3D G3DSA:2.20.200.10 101 142 9.1E-21 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Gene3D G3DSA:2.20.200.10 317 352 9.1E-21 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 SUPERFAMILY SSF56954 2 468 7.98E-108 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Gene3D G3DSA:1.20.1600.10 55 91 2.7E-95 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Gene3D G3DSA:1.20.1600.10 354 467 2.7E-95 T 25-04-2016 SMD_RS20895 3919fb31fef1f216f640e31fe6a815df 471 Gene3D G3DSA:1.20.1600.10 143 316 2.7E-95 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 Gene3D G3DSA:3.40.50.1820 349 653 9.1E-58 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 Pfam PF00326 Prolyl oligopeptidase family 476 667 4.2E-27 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 SUPERFAMILY SSF53474 422 666 1.4E-46 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 PANTHER PTHR11731:SF140 26 131 6.9E-38 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 PANTHER PTHR11731:SF140 347 647 6.9E-38 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 Gene3D G3DSA:2.120.10.30 249 285 5.5E-6 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 Gene3D G3DSA:2.120.10.30 35 200 5.5E-6 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 SUPERFAMILY SSF82171 153 179 4.45E-9 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 SUPERFAMILY SSF82171 34 108 4.45E-9 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 SUPERFAMILY SSF82171 228 399 4.45E-9 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 PANTHER PTHR11731 26 131 6.9E-38 T 25-04-2016 SMD_RS15735 ef1d9ba90830c0a4fde937dfaf9fe141 675 PANTHER PTHR11731 347 647 6.9E-38 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 25-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 PANTHER PTHR13789 1 393 1.2E-139 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.57E-20 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.57E-20 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 3.57E-20 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.57E-20 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 SUPERFAMILY SSF51905 7 178 5.26E-61 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 SUPERFAMILY SSF51905 268 387 5.26E-61 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 Pfam PF01494 FAD binding domain 7 324 6.1E-34 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 PANTHER PTHR13789:SF214 1 393 1.2E-139 T 25-04-2016 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 Gene3D G3DSA:3.50.50.60 4 181 1.4E-44 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 Gene3D G3DSA:3.50.50.60 294 314 1.4E-44 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 392 2.6E-128 T 25-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SMD_RS03790 1dd3f5fbca3c91787017b4de0fc483c1 393 Gene3D G3DSA:3.30.9.10 207 293 2.9E-4 T 25-04-2016 SMD_RS19780 8bb5d551b7ea500f447af01dc4da5ac2 246 Gene3D G3DSA:1.25.40.290 142 245 4.8E-8 T 25-04-2016 SMD_RS19780 8bb5d551b7ea500f447af01dc4da5ac2 246 PANTHER PTHR39167 120 245 1.4E-16 T 25-04-2016 SMD_RS19780 8bb5d551b7ea500f447af01dc4da5ac2 246 Pfam PF08713 DNA alkylation repair enzyme 135 224 4.9E-9 T 25-04-2016 IPR014825 DNA alkylation repair enzyme SMD_RS19780 8bb5d551b7ea500f447af01dc4da5ac2 246 SUPERFAMILY SSF48371 48 245 5.35E-36 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 SUPERFAMILY SSF48019 258 440 2.08E-69 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Gene3D G3DSA:3.40.50.300 22 161 3.7E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Gene3D G3DSA:1.10.3710.10 355 448 3.3E-31 T 25-04-2016 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Gene3D G3DSA:1.20.272.10 255 353 2.7E-41 T 25-04-2016 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 PANTHER PTHR13779 23 448 3.2E-192 T 25-04-2016 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Pfam PF12002 MgsA AAA+ ATPase C terminal 275 440 8.4E-63 T 25-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 62 170 1.5E-14 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 PANTHER PTHR13779:SF7 23 448 3.2E-192 T 25-04-2016 SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 SUPERFAMILY SSF52540 20 236 1.41E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Pfam PF16193 AAA C-terminal domain 197 273 5.7E-22 T 25-04-2016 IPR032423 AAA ATPase, C-terminal domain SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 SMART SM00382 58 174 6.2E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11105 e155ec411a665965b2c563a8a9a2cb57 453 Gene3D G3DSA:1.10.8.60 162 247 1.0E-15 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SUPERFAMILY SSF158472 221 270 1.23E-6 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SUPERFAMILY SSF58104 421 702 9.94E-72 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SMART SM01049 43 138 8.2E-27 T 25-04-2016 IPR033480 Single Cache domain 2 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SMART SM00304 311 362 63.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SMART SM00304 401 453 42.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SMART SM00304 220 272 9.7E-6 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 Pfam PF17200 Single Cache domain 2 47 193 4.8E-37 T 25-04-2016 IPR033480 Single Cache domain 2 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PANTHER PTHR32089 436 704 6.9E-162 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PANTHER PTHR32089 206 254 6.9E-162 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 SMART SM00283 454 701 1.1E-91 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 9.5E-59 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 199 224 9.5E-59 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 552 579 9.5E-59 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 629 658 9.5E-59 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 581 610 9.5E-59 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 Pfam PF00672 HAMP domain 201 268 5.7E-11 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 Gene3D G3DSA:1.10.287.950 469 673 1.3E-61 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PANTHER PTHR32089:SF63 436 704 6.9E-162 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 PANTHER PTHR32089:SF63 206 254 6.9E-162 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 Gene3D G3DSA:3.30.450.20 32 190 4.9E-46 T 25-04-2016 SMD_RS10675 1347416ae73deedbcdd27c9500da87f8 756 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 506 700 2.1E-60 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS06930 43d3d4b04f203a5c2ec2682831ab0c4d 151 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 151 6.8E-40 T 25-04-2016 IPR005265 Uncharacterised protein family UPF0093 SMD_RS06930 43d3d4b04f203a5c2ec2682831ab0c4d 151 PANTHER PTHR40255 2 151 1.2E-45 T 25-04-2016 SMD_RS06930 43d3d4b04f203a5c2ec2682831ab0c4d 151 PIRSF PIRSF004638 1 151 6.1E-42 T 25-04-2016 IPR005265 Uncharacterised protein family UPF0093 SMD_RS10200 c688fa6ef02108e4dbf0f96e44092fc4 137 PANTHER PTHR30574 12 137 7.9E-31 T 25-04-2016 SMD_RS10200 c688fa6ef02108e4dbf0f96e44092fc4 137 PANTHER PTHR30574:SF1 12 137 7.9E-31 T 25-04-2016 SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 SUPERFAMILY SSF55073 205 354 3.37E-42 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 Pfam PF01590 GAF domain 27 156 2.3E-8 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 SMART SM00267 189 355 2.0E-47 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 SUPERFAMILY SSF55781 28 164 5.89E-21 T 25-04-2016 IPR029016 GAF domain-like SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 Gene3D G3DSA:3.30.450.40 27 164 3.9E-10 T 25-04-2016 IPR029016 GAF domain-like SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 PANTHER PTHR33121 7 158 1.6E-43 T 25-04-2016 SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 Gene3D G3DSA:3.30.70.270 201 354 8.8E-45 T 25-04-2016 SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 PANTHER PTHR33121:SF12 7 158 1.6E-43 T 25-04-2016 SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 351 2.0E-35 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 SMART SM00065 26 169 0.0055 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS06810 ca2fe1d3a927b3bb8132fbc378f3ec73 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 355 1.3E-39 T 25-04-2016 IPR000160 GGDEF domain SMD_RS01290 4404ad25e1b2a81d8d38437bb2888016 211 PIRSF PIRSF006324 1 210 2.7E-45 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS01290 4404ad25e1b2a81d8d38437bb2888016 211 Pfam PF01810 LysE type translocator 16 208 6.9E-32 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS01290 4404ad25e1b2a81d8d38437bb2888016 211 PANTHER PTHR30086:SF7 2 211 2.9E-99 T 25-04-2016 SMD_RS01290 4404ad25e1b2a81d8d38437bb2888016 211 PANTHER PTHR30086 2 211 2.9E-99 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 SUPERFAMILY SSF56059 99 300 2.12E-62 T 25-04-2016 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 SUPERFAMILY SSF51246 304 371 9.42E-14 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 Gene3D G3DSA:3.30.1490.20 115 181 1.6E-22 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 PANTHER PTHR11609 4 355 2.8E-127 T 25-04-2016 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 352 40.219 T 25-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 PANTHER PTHR11609:SF5 4 355 2.8E-127 T 25-04-2016 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 355 3.2E-109 T 25-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 Gene3D G3DSA:3.30.470.20 182 359 6.3E-60 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 Pfam PF02222 ATP-grasp domain 108 279 5.1E-57 T 25-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 SUPERFAMILY SSF52440 4 96 4.6E-21 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS07535 9616018e866d6f12a7926856f8eee651 382 Gene3D G3DSA:3.40.50.20 4 107 3.2E-26 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Pfam PF00873 AcrB/AcrD/AcrF family 5 1034 0.0 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 4.3E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.3E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 4.3E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 4.3E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 4.3E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.3E-22 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Gene3D G3DSA:3.30.70.1430 575 664 5.4E-5 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82866 811 1035 2.49E-54 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82693 564 664 1.7E-7 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Gene3D G3DSA:1.10.3850.10 279 503 3.1E-49 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Gene3D G3DSA:1.10.3850.10 820 1035 1.0E-57 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PANTHER PTHR32063 2 1042 0.0 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82693 42 127 1.57E-23 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82866 295 501 1.2E-33 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Gene3D G3DSA:3.30.2090.10 188 271 1.3E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Gene3D G3DSA:3.30.2090.10 721 813 6.1E-16 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82714 721 813 3.66E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 25-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82693 273 329 3.14E-17 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82693 152 187 3.14E-17 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 Gene3D G3DSA:3.30.70.1430 42 143 8.7E-31 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 PANTHER PTHR32063:SF24 2 1042 0.0 T 25-04-2016 SMD_RS00935 317d4a2c3d4e2cb64b77d559a4ede0b8 1045 SUPERFAMILY SSF82714 188 271 2.88E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 SUPERFAMILY SSF88659 455 528 2.45E-21 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PANTHER PTHR30603 329 616 4.1E-243 T 25-04-2016 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PANTHER PTHR30603 6 157 4.1E-243 T 25-04-2016 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PANTHER PTHR30603:SF0 329 616 4.1E-243 T 25-04-2016 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PANTHER PTHR30603:SF0 6 157 4.1E-243 T 25-04-2016 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Gene3D G3DSA:1.10.10.10 455 506 8.2E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PRINTS PR00046 Major sigma-70 factor signature 430 438 3.1E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PRINTS PR00046 Major sigma-70 factor signature 590 601 3.1E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PRINTS PR00046 Major sigma-70 factor signature 406 419 3.1E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PRINTS PR00046 Major sigma-70 factor signature 575 590 3.1E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 PRINTS PR00046 Major sigma-70 factor signature 554 566 3.1E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Pfam PF03979 Sigma-70 factor, region 1.1 8 86 3.2E-28 T 25-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Gene3D G3DSA:1.10.10.10 545 615 1.7E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Pfam PF04539 Sigma-70 region 3 461 537 2.1E-30 T 25-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 615 45.749 T 25-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 SUPERFAMILY SSF88659 512 614 1.83E-27 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Pfam PF00140 Sigma-70 factor, region 1.2 103 134 4.4E-13 T 25-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 406 419 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 575 601 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Pfam PF04545 Sigma-70, region 4 550 603 1.5E-19 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Gene3D G3DSA:1.10.601.10 117 451 1.6E-119 T 25-04-2016 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 378 603 9.1E-39 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Pfam PF04546 Sigma-70, non-essential region 144 351 7.8E-51 T 25-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 Pfam PF04542 Sigma-70 region 2 382 451 1.7E-21 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 378 614 1.5E-121 T 25-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SMD_RS19585 6460b88bf709d79b7d0d2688a1e457da 617 SUPERFAMILY SSF88946 120 449 3.77E-96 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS03530 644854bf7f56840599b93b5e1ae8eea4 349 Gene3D G3DSA:3.30.565.10 217 302 3.7E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS03530 644854bf7f56840599b93b5e1ae8eea4 349 Pfam PF06580 Histidine kinase 167 245 1.1E-22 T 25-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SMD_RS03530 644854bf7f56840599b93b5e1ae8eea4 349 PANTHER PTHR34220 10 326 8.4E-51 T 25-04-2016 SMD_RS03530 644854bf7f56840599b93b5e1ae8eea4 349 SUPERFAMILY SSF55874 229 337 2.41E-10 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PANTHER PTHR10133:SF27 2 276 0.0 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PANTHER PTHR10133:SF27 312 923 0.0 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SMART SM00279 168 203 1.9E-13 T 25-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SUPERFAMILY SSF47807 167 280 9.12E-31 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SMART SM00475 2 256 1.1E-107 T 25-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SMART SM00474 326 513 3.1E-35 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 258 2.3E-26 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:3.40.50.1010 3 179 7.4E-63 T 25-04-2016 IPR029060 PIN domain-like SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SUPERFAMILY SSF88723 1 165 2.3E-51 T 25-04-2016 IPR029060 PIN domain-like SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:1.20.1060.10 539 659 4.4E-38 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SMART SM00482 682 888 3.2E-111 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PANTHER PTHR10133 2 276 0.0 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PANTHER PTHR10133 312 923 0.0 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:1.10.150.20 708 814 8.1E-35 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:1.10.150.20 180 241 1.9E-25 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 ProSitePatterns PS00447 DNA polymerase family A signature. 750 769 - T 25-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Pfam PF01612 3'-5' exonuclease 326 512 5.8E-37 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 TIGRFAM TIGR00593 pola: DNA polymerase I 4 924 1.1E-277 T 25-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:3.30.70.370 815 924 1.2E-67 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:3.30.70.370 660 707 1.2E-67 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 3.8E-48 T 25-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 871 884 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 787 798 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 726 739 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 673 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 689 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 750 775 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 809 820 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 841 857 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 696 719 4.7E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Pfam PF00476 DNA polymerase family A 546 922 2.1E-151 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SUPERFAMILY SSF53098 323 512 3.45E-54 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 SUPERFAMILY SSF56672 520 924 3.45E-156 T 25-04-2016 SMD_RS21395 466f0f075a92f38d928f3fb9e6101367 924 Gene3D G3DSA:3.30.420.10 324 538 6.3E-85 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 Gene3D G3DSA:3.50.50.60 318 361 1.2E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 Gene3D G3DSA:3.50.50.60 13 81 1.2E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 Gene3D G3DSA:3.50.50.60 156 236 1.2E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 SUPERFAMILY SSF51905 323 410 1.16E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 SUPERFAMILY SSF51905 140 238 1.16E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 SUPERFAMILY SSF51905 13 96 1.16E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 Pfam PF04820 Tryptophan halogenase 14 463 2.1E-180 T 25-04-2016 IPR006905 Tryptophan halogenase SMD_RS11775 23cef3006d580f003b7e0b1c1d3b723f 510 PIRSF PIRSF011396 8 500 1.5E-178 T 25-04-2016 IPR006905 Tryptophan halogenase SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PANTHER PTHR30115 1 112 1.1E-64 T 25-04-2016 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 25-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 25-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PIRSF PIRSF039144 1 112 7.9E-54 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PRINTS PR00340 P-II protein signature 2 17 6.9E-44 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PRINTS PR00340 P-II protein signature 52 75 6.9E-44 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PRINTS PR00340 P-II protein signature 23 41 6.9E-44 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PRINTS PR00340 P-II protein signature 83 103 6.9E-44 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 Gene3D G3DSA:3.30.70.120 1 112 6.4E-51 T 25-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 SMART SM00938 4 105 1.1E-66 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 SUPERFAMILY SSF54913 1 112 5.08E-46 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 PANTHER PTHR30115:SF12 1 112 1.1E-64 T 25-04-2016 SMD_RS00665 c23c8a124138cb2b6f228a2e6aa400ba 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.2E-43 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Pfam PF02321 Outer membrane efflux protein 292 462 4.1E-20 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Pfam PF02321 Outer membrane efflux protein 71 261 8.8E-14 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 PANTHER PTHR30203:SF5 7 473 1.5E-222 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Gene3D G3DSA:1.20.1600.10 149 322 1.0E-79 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Gene3D G3DSA:1.20.1600.10 358 472 1.0E-79 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Gene3D G3DSA:1.20.1600.10 59 97 1.0E-79 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 PANTHER PTHR30203 7 473 1.5E-222 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 SUPERFAMILY SSF56954 7 30 2.75E-80 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 SUPERFAMILY SSF56954 62 473 2.75E-80 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 471 4.5E-80 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Gene3D G3DSA:2.20.200.10 323 355 1.3E-7 T 25-04-2016 SMD_RS21815 82eb3bac76971c1a77b4cbf2ed0e6eb4 486 Gene3D G3DSA:2.20.200.10 111 148 1.3E-7 T 25-04-2016 SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 Gene3D G3DSA:3.40.50.300 1 221 2.7E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 SMART SM00382 30 217 6.2E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 PANTHER PTHR24220 3 220 1.1E-113 T 25-04-2016 SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 SUPERFAMILY SSF52540 1 222 2.01E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 PANTHER PTHR24220:SF342 3 220 1.1E-113 T 25-04-2016 SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS19330 3624853aa5cc5581fa48ebc016c69fe6 231 Pfam PF00005 ABC transporter 21 169 1.8E-26 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PIRSF PIRSF000097 1 267 1.7E-71 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.5E-46 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PRINTS PR00069 Aldo-keto reductase signature 188 212 1.5E-46 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PRINTS PR00069 Aldo-keto reductase signature 151 180 1.5E-46 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PRINTS PR00069 Aldo-keto reductase signature 116 133 1.5E-46 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.5E-46 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 Pfam PF00248 Aldo/keto reductase family 7 252 1.9E-51 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 SUPERFAMILY SSF51430 2 261 2.88E-87 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 116 133 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PANTHER PTHR11732 1 269 6.3E-153 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 Gene3D G3DSA:3.20.20.100 1 261 1.3E-94 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21190 8de4a4f1438f51b584f107718fd9d130 269 PANTHER PTHR11732:SF100 1 269 6.3E-153 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 3.5E-32 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Gene3D G3DSA:3.30.70.260 645 717 4.8E-9 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 SUPERFAMILY SSF109604 22 206 4.55E-71 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Gene3D G3DSA:3.30.460.10 194 340 1.8E-39 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Pfam PF02824 TGS domain 404 463 1.3E-15 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 PANTHER PTHR21262 11 720 0.0 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 42 718 1.2E-224 T 25-04-2016 IPR004811 RelA/SpoT family GO:0015969 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 SUPERFAMILY SSF55021 648 719 1.57E-6 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Pfam PF13328 HD domain 42 191 3.2E-51 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Gene3D G3DSA:3.10.20.30 403 465 4.6E-19 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 SUPERFAMILY SSF81271 391 463 1.35E-17 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 SMART SM00954 251 361 6.5E-58 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 SMART SM00471 57 169 4.8E-13 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 Pfam PF13291 ACT domain 643 719 1.1E-15 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 SUPERFAMILY SSF81301 197 408 7.19E-57 T 25-04-2016 SMD_RS17870 e826df287f9d2da42b6dc81c1196532c 720 PANTHER PTHR21262:SF0 11 720 0.0 T 25-04-2016 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 514 527 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 452 463 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 215 230 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 201 214 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 168 176 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 144 157 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 371 385 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 277 290 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PRINTS PR00415 Aconitase family signature 291 304 5.3E-41 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Gene3D G3DSA:3.20.19.10 659 914 1.1E-77 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Pfam PF00330 Aconitase family (aconitate hydratase) 70 583 9.4E-181 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Gene3D G3DSA:3.30.499.10 29 247 1.4E-76 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 16 914 0.0 T 25-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670:SF1 688 733 0.0 T 25-04-2016 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670:SF1 776 917 0.0 T 25-04-2016 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670:SF1 1 392 0.0 T 25-04-2016 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670:SF1 437 672 0.0 T 25-04-2016 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670 688 733 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670 776 917 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670 1 392 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 PANTHER PTHR11670 437 672 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 ProSitePatterns PS00450 Aconitase family signature 1. 448 464 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 SUPERFAMILY SSF52016 652 914 4.32E-84 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Pfam PF00694 Aconitase C-terminal domain 713 844 7.6E-45 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Gene3D G3DSA:3.40.1060.10 248 366 2.5E-35 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 SUPERFAMILY SSF53732 3 647 3.53E-223 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Gene3D G3DSA:3.30.499.10 368 392 5.8E-64 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 Gene3D G3DSA:3.30.499.10 440 596 5.8E-64 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS10635 bc92b92c1cb685a5920b31b96dfcb468 917 ProSitePatterns PS01244 Aconitase family signature 2. 514 527 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS15575 44fc4a8f5e8b6fef17fe2c4d5bdaa188 218 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 207 2.3E-41 T 25-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SMD_RS15575 44fc4a8f5e8b6fef17fe2c4d5bdaa188 218 Gene3D G3DSA:3.20.20.70 8 211 1.9E-60 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS15575 44fc4a8f5e8b6fef17fe2c4d5bdaa188 218 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 212 36.607 T 25-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SMD_RS15575 44fc4a8f5e8b6fef17fe2c4d5bdaa188 218 SUPERFAMILY SSF51366 8 210 5.02E-52 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS15575 44fc4a8f5e8b6fef17fe2c4d5bdaa188 218 PANTHER PTHR22854 7 211 1.1E-59 T 25-04-2016 SMD_RS15575 44fc4a8f5e8b6fef17fe2c4d5bdaa188 218 PANTHER PTHR22854:SF6 7 211 1.1E-59 T 25-04-2016 SMD_RS01005 6302a4918bf8b7ef0557a444f3769a64 662 Gene3D G3DSA:1.10.101.10 461 534 6.4E-21 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01005 6302a4918bf8b7ef0557a444f3769a64 662 SUPERFAMILY SSF53955 10 135 5.77E-11 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS01005 6302a4918bf8b7ef0557a444f3769a64 662 Gene3D G3DSA:1.10.530.10 10 135 1.1E-9 T 25-04-2016 SMD_RS01005 6302a4918bf8b7ef0557a444f3769a64 662 Pfam PF01471 Putative peptidoglycan binding domain 469 529 1.5E-15 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01005 6302a4918bf8b7ef0557a444f3769a64 662 SUPERFAMILY SSF47090 459 529 5.76E-16 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 Pfam PF00487 Fatty acid desaturase 62 295 1.4E-24 T 25-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PANTHER PTHR11351 15 315 6.2E-122 T 25-04-2016 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PRINTS PR00075 Fatty acid desaturase family 1 signature 85 105 8.3E-20 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PRINTS PR00075 Fatty acid desaturase family 1 signature 40 60 8.3E-20 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PRINTS PR00075 Fatty acid desaturase family 1 signature 122 151 8.3E-20 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PRINTS PR00075 Fatty acid desaturase family 1 signature 218 239 8.3E-20 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PRINTS PR00075 Fatty acid desaturase family 1 signature 261 275 8.3E-20 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SMD_RS11320 d6adfaa28cea61bca3cd25f26f7891b9 316 PANTHER PTHR11351:SF34 15 315 6.2E-122 T 25-04-2016 SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 Gene3D G3DSA:3.10.580.10 58 184 2.2E-18 T 25-04-2016 SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 Pfam PF03471 Transporter associated domain 210 284 5.3E-21 T 25-04-2016 IPR005170 Transporter-associated domain SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 PANTHER PTHR22777 20 292 8.3E-110 T 25-04-2016 SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 SUPERFAMILY SSF54631 67 203 2.78E-31 T 25-04-2016 SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 SMART SM01091 208 286 5.2E-27 T 25-04-2016 IPR005170 Transporter-associated domain SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 SUPERFAMILY SSF56176 207 291 2.67E-23 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 Gene3D G3DSA:3.30.465.10 185 284 7.0E-27 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 Pfam PF00571 CBS domain 70 125 3.4E-6 T 25-04-2016 IPR000644 CBS domain SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 Pfam PF00571 CBS domain 141 190 2.6E-4 T 25-04-2016 IPR000644 CBS domain SMD_RS07425 a65827e9925653fd0f029c4ccea433a4 293 PANTHER PTHR22777:SF17 20 292 8.3E-110 T 25-04-2016 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 Gene3D G3DSA:3.40.50.2300 8 129 3.4E-39 T 25-04-2016 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 PANTHER PTHR26402 10 240 3.4E-92 T 25-04-2016 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 SUPERFAMILY SSF52172 7 130 2.56E-40 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 PANTHER PTHR26402:SF292 10 240 3.4E-92 T 25-04-2016 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 SMART SM00448 10 121 1.8E-39 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 SUPERFAMILY SSF46894 138 238 6.24E-30 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 SMART SM00862 161 237 1.8E-27 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 Gene3D G3DSA:1.10.10.10 140 240 1.3E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 237 6.1E-25 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04825 4195ec6e4dabbf9bd447b9e25ceba480 243 Pfam PF00072 Response regulator receiver domain 12 121 3.0E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 Gene3D G3DSA:3.40.50.150 27 249 8.5E-54 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 25-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 SUPERFAMILY SSF53335 22 249 1.14E-44 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 25-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 PANTHER PTHR10108:SF864 10 252 4.1E-157 T 25-04-2016 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 38.006 T 25-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 PANTHER PTHR10108 10 252 4.1E-157 T 25-04-2016 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 252 3.1E-90 T 25-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMD_RS18905 be849cb59b5f666dea2b0ba36ef76376 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 8.4E-82 T 25-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 5.4E-5 T 25-04-2016 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 5.4E-5 T 25-04-2016 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 5.4E-5 T 25-04-2016 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 5.4E-5 T 25-04-2016 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 PANTHER PTHR22773 6 482 1.4E-169 T 25-04-2016 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 Pfam PF00361 Proton-conducting membrane transporter 130 421 1.8E-72 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 475 17.604 T 25-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 PANTHER PTHR22773:SF41 6 482 1.4E-169 T 25-04-2016 SMD_RS15415 09a4408b7ebe2e40abf836d54cdf7e70 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 17 474 1.1E-135 T 25-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 SUPERFAMILY SSF74650 49 244 1.54E-21 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 PANTHER PTHR22762:SF38 57 278 1.6E-80 T 25-04-2016 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 Pfam PF01055 Glycosyl hydrolases family 31 391 625 1.6E-51 T 25-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 SUPERFAMILY SSF49785 974 1107 5.53E-23 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 Pfam PF17137 Domain of unknown function (DUF5110) 642 713 3.0E-16 T 25-04-2016 IPR033403 Domain of unknown function DUF5110 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 PANTHER PTHR22762 300 762 1.6E-80 T 25-04-2016 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 PANTHER PTHR22762 57 278 1.6E-80 T 25-04-2016 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 Pfam PF00754 F5/8 type C domain 809 921 6.3E-9 T 25-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 PANTHER PTHR22762:SF38 300 762 1.6E-80 T 25-04-2016 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 SUPERFAMILY SSF49785 803 920 7.18E-18 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 SMART SM00776 970 1108 6.2E-9 T 25-04-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 Pfam PF08305 NPCBM/NEW2 domain 973 1106 8.5E-24 T 25-04-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 Pfam PF16338 Domain of unknown function (DUF4968) 49 131 6.6E-7 T 25-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 SUPERFAMILY SSF51011 532 620 5.11E-13 T 25-04-2016 SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 Gene3D G3DSA:2.60.120.260 807 921 1.4E-15 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS20785 4ae69a007e5d4c3b262a2c7fe85abdc3 1119 SUPERFAMILY SSF51445 250 530 2.11E-27 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PRINTS PR00175 Sodium/alanine symporter signature 196 214 1.1E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PRINTS PR00175 Sodium/alanine symporter signature 315 333 1.1E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PRINTS PR00175 Sodium/alanine symporter signature 224 243 1.1E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PRINTS PR00175 Sodium/alanine symporter signature 438 458 1.1E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PRINTS PR00175 Sodium/alanine symporter signature 375 397 1.1E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.1E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 469 3.0E-138 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 Pfam PF01235 Sodium:alanine symporter family 50 481 1.3E-153 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PANTHER PTHR30330:SF7 197 500 2.7E-291 T 25-04-2016 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PANTHER PTHR30330:SF7 1 177 2.7E-291 T 25-04-2016 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PANTHER PTHR30330 197 500 2.7E-291 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17600 03f3cd6af358c88399e0f82b1b5db2ae 502 PANTHER PTHR30330 1 177 2.7E-291 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 Gene3D G3DSA:3.20.20.80 175 584 5.5E-134 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 177 520 3.7E-115 T 25-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 SUPERFAMILY SSF51445 177 533 3.31E-119 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 200 221 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 318 336 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 171 188 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 137 157 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 340 353 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 271 288 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PRINTS PR00738 Glycosyl hydrolase family 20 signature 502 519 3.7E-43 T 25-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PANTHER PTHR22600:SF21 48 237 4.8E-217 T 25-04-2016 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PANTHER PTHR22600:SF21 254 674 4.8E-217 T 25-04-2016 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 565 616 2.6E-6 T 25-04-2016 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PANTHER PTHR22600 48 237 4.8E-217 T 25-04-2016 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 PANTHER PTHR22600 254 674 4.8E-217 T 25-04-2016 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 Gene3D G3DSA:3.30.379.10 39 174 3.0E-24 T 25-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 50 174 3.7E-21 T 25-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 SUPERFAMILY SSF55545 48 176 1.44E-20 T 25-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SMD_RS18745 ae621716445d65f63f3182592bfb340d 785 Gene3D G3DSA:2.60.120.260 717 784 1.5E-5 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS06970 6734c35fa37835747decf345762e3018 340 Gene3D G3DSA:2.160.10.10 102 308 1.7E-42 T 25-04-2016 SMD_RS06970 6734c35fa37835747decf345762e3018 340 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 203 217 0.007 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS06970 6734c35fa37835747decf345762e3018 340 SUPERFAMILY SSF51161 35 319 9.43E-79 T 25-04-2016 IPR011004 Trimeric LpxA-like SMD_RS06970 6734c35fa37835747decf345762e3018 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 328 36.215 T 25-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SMD_RS06970 6734c35fa37835747decf345762e3018 340 PANTHER PTHR22572:SF117 100 297 1.2E-52 T 25-04-2016 SMD_RS06970 6734c35fa37835747decf345762e3018 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 26 91 1.5E-23 T 25-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 SMD_RS06970 6734c35fa37835747decf345762e3018 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 331 8.9E-125 T 25-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SMD_RS06970 6734c35fa37835747decf345762e3018 340 PANTHER PTHR22572 100 297 1.2E-52 T 25-04-2016 SMD_RS06970 6734c35fa37835747decf345762e3018 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 145 8.9E-7 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS06970 6734c35fa37835747decf345762e3018 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 259 4.1E-5 T 25-04-2016 IPR001451 Hexapeptide repeat SMD_RS15360 e120145db9133a7d7ac7f901f05eb4a2 134 PANTHER PTHR21366:SF14 2 126 2.6E-57 T 25-04-2016 SMD_RS15360 e120145db9133a7d7ac7f901f05eb4a2 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 2.0E-13 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS15360 e120145db9133a7d7ac7f901f05eb4a2 134 Gene3D G3DSA:3.10.180.10 8 130 3.4E-34 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS15360 e120145db9133a7d7ac7f901f05eb4a2 134 PANTHER PTHR21366 2 126 2.6E-57 T 25-04-2016 SMD_RS15360 e120145db9133a7d7ac7f901f05eb4a2 134 SUPERFAMILY SSF54593 6 123 2.15E-26 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS04150 e13864065224b2425c264885e9b244ec 157 Pfam PF00177 Ribosomal protein S7p/S5e 1 150 6.7E-65 T 25-04-2016 IPR023798 Ribosomal protein S7 domain SMD_RS04150 e13864065224b2425c264885e9b244ec 157 PIRSF PIRSF002122 2 157 2.6E-60 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SMD_RS04150 e13864065224b2425c264885e9b244ec 157 PANTHER PTHR11205 1 157 5.1E-86 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SMD_RS04150 e13864065224b2425c264885e9b244ec 157 SUPERFAMILY SSF47973 1 150 3.4E-57 T 25-04-2016 IPR023798 Ribosomal protein S7 domain SMD_RS04150 e13864065224b2425c264885e9b244ec 157 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 25-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SMD_RS04150 e13864065224b2425c264885e9b244ec 157 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 157 35.435 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SMD_RS04150 e13864065224b2425c264885e9b244ec 157 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 157 6.3E-65 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SMD_RS04150 e13864065224b2425c264885e9b244ec 157 Gene3D G3DSA:1.10.455.10 8 157 3.7E-64 T 25-04-2016 IPR023798 Ribosomal protein S7 domain SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 11 280 1.8E-81 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 Gene3D G3DSA:3.30.300.20 194 293 2.0E-36 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 Hamap MF_00367 GTPase Era [era]. 7 297 34.971 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 PANTHER PTHR11649:SF3 2 298 1.1E-113 T 25-04-2016 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 168 1.4E-28 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.4E-23 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 1.5E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 1.5E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 PANTHER PTHR11649 2 298 1.1E-113 T 25-04-2016 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 Gene3D G3DSA:3.40.50.300 10 193 1.3E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 SUPERFAMILY SSF54814 183 298 3.01E-39 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 Pfam PF07650 KH domain 210 285 2.6E-19 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SMD_RS16220 e5bceecfb0eaf3b8695d7e74dfc3a0a0 298 SUPERFAMILY SSF52540 12 206 1.01E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09455 2230556d6ec67f86044f6ebd2cb58a09 138 SUPERFAMILY SSF46785 6 134 6.83E-37 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09455 2230556d6ec67f86044f6ebd2cb58a09 138 Gene3D G3DSA:1.10.10.10 4 84 2.7E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09455 2230556d6ec67f86044f6ebd2cb58a09 138 PANTHER PTHR33202 6 132 3.3E-33 T 25-04-2016 SMD_RS09455 2230556d6ec67f86044f6ebd2cb58a09 138 Pfam PF01475 Ferric uptake regulator family 9 132 1.3E-40 T 25-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 SUPERFAMILY SSF56601 337 380 6.26E-62 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 SUPERFAMILY SSF56601 8 259 6.26E-62 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 PANTHER PTHR22935 61 278 8.9E-33 T 25-04-2016 SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 PANTHER PTHR22935 332 364 8.9E-33 T 25-04-2016 SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 Pfam PF00144 Beta-lactamase 28 378 3.7E-32 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 Gene3D G3DSA:3.40.710.10 57 263 2.2E-49 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS11800 1dcd60dac05427a482eedb3cee26c7b8 393 Gene3D G3DSA:3.40.710.10 331 374 2.2E-49 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS12355 b5e6c228abadf9b20014ab5c888b6799 231 SUPERFAMILY SSF52540 3 221 1.2E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12355 b5e6c228abadf9b20014ab5c888b6799 231 Gene3D G3DSA:3.40.50.300 5 222 3.2E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12355 b5e6c228abadf9b20014ab5c888b6799 231 PANTHER PTHR24220 8 220 2.6E-59 T 25-04-2016 SMD_RS12355 b5e6c228abadf9b20014ab5c888b6799 231 PANTHER PTHR24220:SF430 8 220 2.6E-59 T 25-04-2016 SMD_RS12355 b5e6c228abadf9b20014ab5c888b6799 231 SMART SM00382 31 224 1.8E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS12355 b5e6c228abadf9b20014ab5c888b6799 231 Pfam PF00005 ABC transporter 27 176 1.6E-24 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 SUPERFAMILY SSF48452 360 495 1.07E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 Pfam PF01435 Peptidase family M48 63 259 3.2E-39 T 25-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 PANTHER PTHR22726:SF10 2 286 7.2E-83 T 25-04-2016 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 Gene3D G3DSA:1.25.40.10 377 504 1.7E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 Pfam PF14559 Tetratricopeptide repeat 406 467 1.6E-6 T 25-04-2016 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 536 29.182 T 25-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 Gene3D G3DSA:3.30.2010.10 60 141 1.6E-19 T 25-04-2016 SMD_RS04510 887d18116a97b0f18874b860acaf145c 548 PANTHER PTHR22726 2 286 7.2E-83 T 25-04-2016 SMD_RS00820 697c1ba9c3c6c430bc1f9140d7b003a6 242 PANTHER PTHR30041 33 224 2.1E-123 T 25-04-2016 SMD_RS00820 697c1ba9c3c6c430bc1f9140d7b003a6 242 Pfam PF03358 NADPH-dependent FMN reductase 34 179 5.7E-28 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMD_RS00820 697c1ba9c3c6c430bc1f9140d7b003a6 242 SUPERFAMILY SSF52218 32 226 3.96E-61 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS00820 697c1ba9c3c6c430bc1f9140d7b003a6 242 Gene3D G3DSA:3.40.50.360 27 228 9.3E-99 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS00820 697c1ba9c3c6c430bc1f9140d7b003a6 242 PANTHER PTHR30041:SF1 33 224 2.1E-123 T 25-04-2016 SMD_RS00820 697c1ba9c3c6c430bc1f9140d7b003a6 242 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 10 225 2.7E-115 T 25-04-2016 IPR014063 Arsenate resistance ArsH SMD_RS20845 8dfef81ca287250c5ce8bb903fdf61c7 187 Pfam PF12395 Protein of unknown function 110 179 9.0E-9 T 25-04-2016 IPR022123 Protein of unknown function DUF3658 SMD_RS20845 8dfef81ca287250c5ce8bb903fdf61c7 187 ProDom PD069398 YJEN 90 184 8.0E-4 T 25-04-2016 IPR020528 Uncharacterised protein family YjeN SMD_RS12825 18b627588eb8e4a5cce25011e530afae 596 PANTHER PTHR30509:SF1 238 574 3.1E-70 T 25-04-2016 SMD_RS12825 18b627588eb8e4a5cce25011e530afae 596 PANTHER PTHR30509 4 208 3.1E-70 T 25-04-2016 SMD_RS12825 18b627588eb8e4a5cce25011e530afae 596 PANTHER PTHR30509 238 574 3.1E-70 T 25-04-2016 SMD_RS12825 18b627588eb8e4a5cce25011e530afae 596 Pfam PF04632 Fusaric acid resistance protein family 3 590 1.1E-128 T 25-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 SMD_RS12825 18b627588eb8e4a5cce25011e530afae 596 PANTHER PTHR30509:SF1 4 208 3.1E-70 T 25-04-2016 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 Gene3D G3DSA:3.40.710.10 349 741 2.1E-92 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 SUPERFAMILY SSF56601 380 764 1.15E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 SUPERFAMILY SSF56601 328 350 1.15E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 Pfam PF14814 Bifunctional transglycosylase second domain 76 160 1.3E-20 T 25-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 PANTHER PTHR32282:SF11 159 803 2.2E-251 T 25-04-2016 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 Gene3D G3DSA:3.30.2060.10 76 162 1.9E-14 T 25-04-2016 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 Pfam PF00912 Transglycosylase 168 346 1.6E-51 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 PIRSF PIRSF002799 4 787 8.9E-274 T 25-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 Gene3D G3DSA:1.10.3810.10 171 348 4.1E-55 T 25-04-2016 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 PANTHER PTHR32282 159 803 2.2E-251 T 25-04-2016 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 31 761 1.9E-285 T 25-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 682 9.0E-17 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMD_RS16815 db687dcf598c89e07523a30c02ab00e2 812 SUPERFAMILY SSF53955 165 368 6.75E-55 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS05455 777d5231763393ab099a4cb4dd458593 188 Pfam PF03968 OstA-like protein 44 141 7.7E-16 T 25-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SMD_RS05455 777d5231763393ab099a4cb4dd458593 188 Gene3D G3DSA:2.60.450.10 23 156 8.6E-21 T 25-04-2016 SMD_RS05455 777d5231763393ab099a4cb4dd458593 188 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 159 19.716 T 25-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SMD_RS05455 777d5231763393ab099a4cb4dd458593 188 PANTHER PTHR36504 1 177 1.3E-28 T 25-04-2016 SMD_RS05455 777d5231763393ab099a4cb4dd458593 188 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 21 159 4.9E-28 T 25-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 SUPERFAMILY SSF54862 155 208 6.0E-19 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 SUPERFAMILY SSF54862 80 99 6.0E-19 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 SUPERFAMILY SSF54862 262 333 6.0E-19 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 PANTHER PTHR24960 256 344 1.8E-48 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 PANTHER PTHR24960 15 214 1.8E-48 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 264 275 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 Pfam PF12801 4Fe-4S binding domain 70 105 1.5E-7 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 Pfam PF13746 4Fe-4S dicluster domain 178 214 3.2E-7 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 Pfam PF13746 4Fe-4S dicluster domain 259 316 3.8E-16 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 PANTHER PTHR24960:SF45 256 344 1.8E-48 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 PANTHER PTHR24960:SF45 15 214 1.8E-48 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 Gene3D G3DSA:3.30.70.20 177 210 1.1E-8 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 Gene3D G3DSA:3.30.70.20 264 300 1.1E-8 T 25-04-2016 SMD_RS08630 9f37e9e1c8546c5eff848778a3f34540 351 Gene3D G3DSA:3.30.70.20 93 94 1.1E-8 T 25-04-2016 SMD_RS20600 f8e4963f7b745bb6c9fcfeb838b09deb 220 PIRSF PIRSF033239 3 211 6.6E-47 T 25-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD SMD_RS20600 f8e4963f7b745bb6c9fcfeb838b09deb 220 Pfam PF06055 Exopolysaccharide synthesis, ExoD 15 196 6.5E-47 T 25-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD SMD_RS20600 f8e4963f7b745bb6c9fcfeb838b09deb 220 PANTHER PTHR41795 7 214 8.6E-31 T 25-04-2016 SMD_RS07890 7cd9a5d53354db614520c649930276a2 506 Pfam PF07916 TraG-like protein, N-terminal region 10 489 2.8E-96 T 25-04-2016 IPR012931 TraG-like, N-terminal SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 SUPERFAMILY SSF55073 380 537 3.37E-43 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 SMART SM00267 364 538 7.0E-55 T 25-04-2016 IPR000160 GGDEF domain SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 Gene3D G3DSA:3.30.70.270 377 536 2.7E-48 T 25-04-2016 SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 535 3.1E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 Pfam PF05226 CHASE2 domain 21 313 3.2E-48 T 25-04-2016 IPR007890 CHASE2 SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 533 3.1E-42 T 25-04-2016 IPR000160 GGDEF domain SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 PANTHER PTHR10799 407 532 1.6E-20 T 25-04-2016 SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 SMART SM01080 31 316 9.1E-60 T 25-04-2016 IPR007890 CHASE2 SMD_RS15940 a5ce8cedb0089205fa7afe7e305309f5 541 PANTHER PTHR10799:SF750 407 532 1.6E-20 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82693 559 654 6.02E-13 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:3.30.2090.10 709 779 6.4E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:3.30.2090.10 817 831 6.4E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:3.30.2090.10 181 263 2.7E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82693 40 131 1.74E-21 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82693 136 180 2.93E-23 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82693 266 322 2.93E-23 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PANTHER PTHR32063:SF21 819 1065 0.0 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PANTHER PTHR32063:SF21 1 782 0.0 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:3.30.70.1430 40 139 1.0E-26 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:1.10.3850.10 838 1053 6.0E-54 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:1.20.1640.10 284 492 2.6E-61 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Pfam PF00873 AcrB/AcrD/AcrF family 4 1051 5.7E-300 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 613 627 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 2.7E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82866 833 1057 7.98E-45 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 Gene3D G3DSA:3.30.70.1430 562 648 9.4E-8 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PANTHER PTHR32063 819 1065 0.0 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 PANTHER PTHR32063 1 782 0.0 T 25-04-2016 SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82714 710 779 1.7E-10 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82714 181 264 2.88E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS20115 575abc3eef799f278c3bb07550b8d4f3 1077 SUPERFAMILY SSF82866 288 489 1.7E-48 T 25-04-2016 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PANTHER PTHR30386:SF8 21 412 1.2E-69 T 25-04-2016 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 1.7E-16 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 1.7E-16 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 380 395 1.7E-16 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 395 414 1.7E-16 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 1.7E-16 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 PANTHER PTHR30386 21 412 1.2E-69 T 25-04-2016 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 Pfam PF13437 HlyD family secretion protein 264 383 5.3E-18 T 25-04-2016 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 Gene3D G3DSA:2.40.50.100 67 99 3.3E-12 T 25-04-2016 SMD_RS17520 ecdff6879cabf86df6d4a9ec19436b45 414 Gene3D G3DSA:2.40.50.100 252 292 3.3E-12 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Pfam PF00009 Elongation factor Tu GTP binding domain 8 282 9.7E-63 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Gene3D G3DSA:2.40.30.10 303 400 6.6E-24 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Pfam PF03144 Elongation factor Tu domain 2 321 387 4.9E-12 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Pfam PF03764 Elongation factor G, domain IV 476 592 8.9E-34 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SUPERFAMILY SSF50447 265 396 2.87E-25 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SUPERFAMILY SSF54211 476 593 4.05E-28 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Gene3D G3DSA:3.30.70.870 403 477 7.6E-25 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Gene3D G3DSA:3.40.50.300 6 287 7.5E-94 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SUPERFAMILY SSF52540 7 282 1.64E-92 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SUPERFAMILY SSF54980 597 676 1.25E-18 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 673 3.8E-223 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PANTHER PTHR23115:SF66 8 181 1.3E-234 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PANTHER PTHR23115:SF66 301 675 1.3E-234 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PANTHER PTHR23115:SF66 255 283 1.3E-234 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Pfam PF00679 Elongation factor G C-terminus 596 676 1.7E-21 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.746257E-17 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PRINTS PR00315 GTP-binding elongation factor signature 82 92 3.746257E-17 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PRINTS PR00315 GTP-binding elongation factor signature 57 65 3.746257E-17 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PRINTS PR00315 GTP-binding elongation factor signature 98 109 3.746257E-17 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PRINTS PR00315 GTP-binding elongation factor signature 134 143 3.746257E-17 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SUPERFAMILY SSF54980 403 478 3.09E-19 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PANTHER PTHR23115 8 181 1.3E-234 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PANTHER PTHR23115 301 675 1.3E-234 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 PANTHER PTHR23115 255 283 1.3E-234 T 25-04-2016 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SMART SM00889 477 594 1.1E-45 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Gene3D G3DSA:3.30.70.240 599 676 8.9E-22 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 SMART SM00838 596 678 3.7E-17 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 181 6.7E-28 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Pfam PF14492 Elongation Factor G, domain II 404 474 7.9E-23 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 Gene3D G3DSA:3.30.230.10 490 598 1.4E-34 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS11150 c48702d1232ba483a6bbc20765c45f50 678 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 50 65 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS19095 667ee20e09c4f6ed3fdb99fec28e721e 404 Pfam PF12704 MacB-like periplasmic core domain 46 243 2.8E-10 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS19095 667ee20e09c4f6ed3fdb99fec28e721e 404 Pfam PF02687 FtsX-like permease family 285 395 1.3E-16 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS19095 667ee20e09c4f6ed3fdb99fec28e721e 404 PANTHER PTHR30572 161 404 4.6E-29 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Pfam PF03477 ATP cone domain 26 111 4.8E-11 T 25-04-2016 IPR005144 ATP-cone domain SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 160 231 2.9E-18 T 25-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Pfam PF02867 Ribonucleotide reductase, barrel domain 235 757 2.7E-181 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 601 623 - T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 SUPERFAMILY SSF51998 692 762 2.04E-177 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 SUPERFAMILY SSF51998 234 661 2.04E-177 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Gene3D G3DSA:3.20.70.20 407 567 4.8E-74 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Gene3D G3DSA:3.20.70.20 612 657 4.8E-74 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Gene3D G3DSA:3.20.70.20 718 759 4.8E-74 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 Gene3D G3DSA:3.20.70.20 147 357 4.8E-74 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 SUPERFAMILY SSF48168 31 233 1.57E-56 T 25-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PRINTS PR01183 Ribonucleotide reductase large chain signature 612 639 1.2E-56 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 454 1.2E-56 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PRINTS PR01183 Ribonucleotide reductase large chain signature 311 330 1.2E-56 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 570 1.2E-56 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PRINTS PR01183 Ribonucleotide reductase large chain signature 481 504 1.2E-56 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PRINTS PR01183 Ribonucleotide reductase large chain signature 519 541 1.2E-56 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PANTHER PTHR11573:SF6 28 800 0.0 T 25-04-2016 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 163 761 1.2E-223 T 25-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMD_RS01280 67d7a99859fa45fcd55118d1bb85b3b1 800 PANTHER PTHR11573 28 800 0.0 T 25-04-2016 SMD_RS11375 deee1e20191f6de9fa14bc45c852c2c2 159 PANTHER PTHR23091:SF210 1 159 6.3E-26 T 25-04-2016 SMD_RS11375 deee1e20191f6de9fa14bc45c852c2c2 159 Pfam PF00583 Acetyltransferase (GNAT) family 53 132 1.5E-12 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS11375 deee1e20191f6de9fa14bc45c852c2c2 159 Gene3D G3DSA:3.40.630.30 1 159 9.4E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS11375 deee1e20191f6de9fa14bc45c852c2c2 159 PANTHER PTHR23091 1 159 6.3E-26 T 25-04-2016 SMD_RS11375 deee1e20191f6de9fa14bc45c852c2c2 159 SUPERFAMILY SSF55729 1 158 1.58E-26 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 Pfam PF02353 Mycolic acid cyclopropane synthetase 133 401 1.6E-82 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 Gene3D G3DSA:3.40.50.150 128 404 1.6E-92 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 PANTHER PTHR10108 338 408 2.6E-114 T 25-04-2016 SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 PANTHER PTHR10108 62 320 2.6E-114 T 25-04-2016 SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 PIRSF PIRSF003085 18 415 1.2E-124 T 25-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 PANTHER PTHR10108:SF795 338 408 2.6E-114 T 25-04-2016 SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 PANTHER PTHR10108:SF795 62 320 2.6E-114 T 25-04-2016 SMD_RS11305 194e88a244688ff7ef81660b382924a3 419 SUPERFAMILY SSF53335 21 360 9.53E-81 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS15180 5761c4b9062bf0df64020478ea45c0b3 221 SMART SM00507 114 167 2.9E-10 T 25-04-2016 IPR003615 HNH nuclease SMD_RS15180 5761c4b9062bf0df64020478ea45c0b3 221 Pfam PF14279 HNH endonuclease 127 181 8.8E-16 T 25-04-2016 IPR029471 HNH endonuclease 5 SMD_RS15180 5761c4b9062bf0df64020478ea45c0b3 221 PANTHER PTHR33877 36 216 3.4E-46 T 25-04-2016 SMD_RS15180 5761c4b9062bf0df64020478ea45c0b3 221 PANTHER PTHR33877:SF2 36 216 3.4E-46 T 25-04-2016 SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 36 137 5.9E-6 T 25-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 307 323 - T 25-04-2016 IPR033379 Histidine acid phosphatase active site SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 PANTHER PTHR41972 1 412 5.7E-105 T 25-04-2016 SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 Gene3D G3DSA:3.40.50.1240 146 278 4.9E-43 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 25-04-2016 IPR033379 Histidine acid phosphatase active site SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 SUPERFAMILY SSF53254 33 409 5.62E-58 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 Gene3D G3DSA:3.40.50.1240 280 410 6.9E-63 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS06860 c0f74fad7788e43416512b1fb66ad1c7 412 Gene3D G3DSA:3.40.50.1240 35 145 6.9E-63 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS18445 cfbdaa3a533d191b434f99eaf2dd5ba2 259 Pfam PF01522 Polysaccharide deacetylase 73 193 1.1E-28 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS18445 cfbdaa3a533d191b434f99eaf2dd5ba2 259 SUPERFAMILY SSF88713 68 253 1.83E-48 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS18445 cfbdaa3a533d191b434f99eaf2dd5ba2 259 PANTHER PTHR10587 36 254 9.8E-44 T 25-04-2016 SMD_RS18445 cfbdaa3a533d191b434f99eaf2dd5ba2 259 Gene3D G3DSA:3.20.20.370 58 253 2.3E-45 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 5.0E-18 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 5.0E-18 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 5.0E-18 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PRINTS PR01005 Flagellar hook-associated protein signature 404 421 5.0E-18 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PRINTS PR01005 Flagellar hook-associated protein signature 354 376 5.0E-18 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 5.0E-18 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 342 5.4E-66 T 25-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PANTHER PTHR30033 1 625 2.7E-110 T 25-04-2016 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 SUPERFAMILY SSF64518 430 623 9.94E-26 T 25-04-2016 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 SUPERFAMILY SSF64518 165 416 1.44E-25 T 25-04-2016 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 PANTHER PTHR30033:SF1 1 625 2.7E-110 T 25-04-2016 SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 568 621 1.3E-12 T 25-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMD_RS10920 bee6e4048b3d758c2f434097714cf709 626 Pfam PF00460 Flagella basal body rod protein 5 34 1.2E-7 T 25-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PANTHER PTHR11528 5 627 0.0 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 78 95 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 29 51 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 193 211 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 175 192 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 96 113 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 8 28 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PRINTS PR00775 90kDa heat shock protein signature 123 145 5.2E-60 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 SMART SM00387 30 187 2.5E-10 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 7.8E-13 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 SUPERFAMILY SSF110942 514 626 3.4E-34 T 25-04-2016 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 626 31.81 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 25-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PANTHER PTHR11528:SF44 5 627 0.0 T 25-04-2016 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 SUPERFAMILY SSF54211 232 487 1.82E-93 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 SUPERFAMILY SSF55874 7 216 3.14E-64 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 Pfam PF00183 Hsp90 protein 222 625 3.5E-126 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 PIRSF PIRSF002583 1 630 1.0E-205 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS09215 7970d14637e0bd23d6fecb1e63966d84 630 Gene3D G3DSA:3.30.565.10 8 239 2.0E-80 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10800 bcddf19d5f2bdd45272c6fb8123ad730 139 Pfam PF04347 Flagellar biosynthesis protein, FliO 51 135 1.9E-23 T 25-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SMD_RS10800 bcddf19d5f2bdd45272c6fb8123ad730 139 PANTHER PTHR38766:SF1 8 139 2.1E-30 T 25-04-2016 SMD_RS10800 bcddf19d5f2bdd45272c6fb8123ad730 139 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 39 106 1.8E-23 T 25-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SMD_RS10800 bcddf19d5f2bdd45272c6fb8123ad730 139 PANTHER PTHR38766 8 139 2.1E-30 T 25-04-2016 SMD_RS09430 d903eef3c64edd672c093a72da4df48e 143 Gene3D G3DSA:3.40.630.30 45 140 4.9E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09430 d903eef3c64edd672c093a72da4df48e 143 SUPERFAMILY SSF55729 17 140 1.58E-25 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09430 d903eef3c64edd672c093a72da4df48e 143 PANTHER PTHR23091 63 141 3.9E-16 T 25-04-2016 SMD_RS09430 d903eef3c64edd672c093a72da4df48e 143 Pfam PF00583 Acetyltransferase (GNAT) family 51 119 9.8E-14 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 Gene3D G3DSA:1.10.155.10 15 88 5.3E-31 T 25-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 SUPERFAMILY SSF53335 90 281 1.41E-51 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PIRSF PIRSF000410 10 286 3.0E-89 T 25-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 Pfam PF03705 CheR methyltransferase, all-alpha domain 25 74 8.3E-18 T 25-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 Pfam PF01739 CheR methyltransferase, SAM binding domain 90 274 7.4E-51 T 25-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PANTHER PTHR24422:SF13 12 274 3.3E-109 T 25-04-2016 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 SUPERFAMILY SSF47757 14 89 1.96E-21 T 25-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 Gene3D G3DSA:3.40.50.150 89 281 3.5E-63 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PRINTS PR00996 Glutamate methyltransferase family signature 83 95 7.6E-39 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 7.6E-39 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PRINTS PR00996 Glutamate methyltransferase family signature 45 58 7.6E-39 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 7.6E-39 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 7.6E-39 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 7.6E-39 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 SMART SM00138 23 284 4.7E-90 T 25-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMD_RS10670 6362e576f8ab4ccc06b05a830e7f47fe 289 PANTHER PTHR24422 12 274 3.3E-109 T 25-04-2016 SMD_RS18555 5eeb1ae04e81f414102ee9dc57ca70f4 367 SUPERFAMILY SSF51395 4 367 7.1E-111 T 25-04-2016 SMD_RS18555 5eeb1ae04e81f414102ee9dc57ca70f4 367 PANTHER PTHR22893:SF14 5 365 3.9E-147 T 25-04-2016 SMD_RS18555 5eeb1ae04e81f414102ee9dc57ca70f4 367 Gene3D G3DSA:3.20.20.70 3 365 5.5E-123 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS18555 5eeb1ae04e81f414102ee9dc57ca70f4 367 PANTHER PTHR22893 5 365 3.9E-147 T 25-04-2016 SMD_RS18555 5eeb1ae04e81f414102ee9dc57ca70f4 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 343 8.6E-81 T 25-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 SMART SM00388 240 305 1.5E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 Pfam PF08521 Two-component sensor kinase N-terminal 20 162 9.8E-31 T 25-04-2016 IPR013727 Two-component sensor kinase, N-terminal SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 SMART SM00387 352 457 2.2E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 453 8.5E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 SUPERFAMILY SSF47384 224 304 7.46E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 PANTHER PTHR24423 219 456 3.4E-55 T 25-04-2016 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-7 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-7 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.2E-7 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 Gene3D G3DSA:3.30.565.10 309 456 2.1E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 SUPERFAMILY SSF55874 294 456 4.19E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 2.0E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12445 2a82112444a5dab1881166a8b5d9584d 457 Gene3D G3DSA:1.10.287.130 232 301 9.9E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 Gene3D G3DSA:3.40.50.300 1 136 1.4E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 333 2.2E-94 T 25-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 SUPERFAMILY SSF48019 212 334 6.12E-21 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.4E-21 T 25-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 PANTHER PTHR34388 1 344 8.8E-73 T 25-04-2016 SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 Gene3D G3DSA:1.10.8.60 145 222 1.8E-31 T 25-04-2016 SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 SUPERFAMILY SSF52540 2 210 4.2E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15910 d76b873bf47d19f36f48b68eab0ae8d9 345 Gene3D G3DSA:1.20.272.20 223 337 2.2E-24 T 25-04-2016 SMD_RS19630 41b93734078eb58648f4011e7b02e626 569 PANTHER PTHR33908:SF3 7 562 4.3E-101 T 25-04-2016 SMD_RS19630 41b93734078eb58648f4011e7b02e626 569 PANTHER PTHR33908 7 562 4.3E-101 T 25-04-2016 SMD_RS19630 41b93734078eb58648f4011e7b02e626 569 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 223 4.9E-15 T 25-04-2016 SMD_RS11610 e1536fd097e3cba7142c7ecc10db7992 173 PANTHER PTHR30565 8 173 4.0E-68 T 25-04-2016 SMD_RS11610 e1536fd097e3cba7142c7ecc10db7992 173 SUPERFAMILY SSF47240 9 158 5.78E-35 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS11610 e1536fd097e3cba7142c7ecc10db7992 173 Pfam PF05974 Domain of unknown function (DUF892) 10 160 5.1E-37 T 25-04-2016 IPR010287 Domain of unknown function DUF892 SMD_RS11610 e1536fd097e3cba7142c7ecc10db7992 173 Gene3D G3DSA:1.20.1260.10 9 165 1.6E-35 T 25-04-2016 IPR012347 Ferritin-related SMD_RS11610 e1536fd097e3cba7142c7ecc10db7992 173 PANTHER PTHR30565:SF1 8 173 4.0E-68 T 25-04-2016 SMD_RS04520 c2087ac3785bebfefe84a6818b2cbe5a 130 Gene3D G3DSA:1.20.1290.10 9 120 4.2E-30 T 25-04-2016 IPR029032 AhpD-like SMD_RS04520 c2087ac3785bebfefe84a6818b2cbe5a 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 112 7.1E-17 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS04520 c2087ac3785bebfefe84a6818b2cbe5a 130 PANTHER PTHR33930:SF1 10 126 5.1E-77 T 25-04-2016 SMD_RS04520 c2087ac3785bebfefe84a6818b2cbe5a 130 PANTHER PTHR33930 10 126 5.1E-77 T 25-04-2016 SMD_RS04520 c2087ac3785bebfefe84a6818b2cbe5a 130 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 48 95 5.4E-10 T 25-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS04520 c2087ac3785bebfefe84a6818b2cbe5a 130 SUPERFAMILY SSF69118 5 112 5.37E-25 T 25-04-2016 IPR029032 AhpD-like SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 Gene3D G3DSA:2.60.120.10 23 94 2.8E-10 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 Gene3D G3DSA:1.10.10.60 156 211 4.1E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 Pfam PF02311 AraC-like ligand binding domain 30 93 5.0E-6 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 Pfam PF12833 Helix-turn-helix domain 181 257 6.4E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 PANTHER PTHR11019:SF66 11 262 8.9E-120 T 25-04-2016 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 SMART SM00342 175 257 9.3E-15 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 Gene3D G3DSA:1.10.10.60 216 256 6.5E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 SUPERFAMILY SSF51182 15 183 6.96E-15 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 PANTHER PTHR11019 11 262 8.9E-120 T 25-04-2016 SMD_RS12820 a9d07ec681c97b1131840d87797aae60 264 SUPERFAMILY SSF46689 213 256 8.96E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 5.4E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 5.4E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 5.4E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 Gene3D G3DSA:2.40.50.140 11 87 2.1E-33 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 PANTHER PTHR10744 11 87 2.1E-36 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 5.0E-35 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 86 24.333 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.8E-34 T 25-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 SUPERFAMILY SSF50249 11 87 2.1E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS04215 68e5640d6fd27b1b98a587c2417cf902 89 Pfam PF00366 Ribosomal protein S17 15 82 1.2E-31 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 Gene3D G3DSA:3.90.15.10 102 232 1.5E-36 T 25-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 99 303 2.3E-29 T 25-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 SUPERFAMILY SSF55869 36 96 1.03E-21 T 25-04-2016 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 181 197 1.0E-7 T 25-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 136 155 1.0E-7 T 25-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 299 310 1.0E-7 T 25-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 159 173 1.0E-7 T 25-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 246 260 1.0E-7 T 25-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 SUPERFAMILY SSF56349 92 318 1.5E-64 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS00465 0065087ebfad09664a042e61e386aba1 352 Gene3D G3DSA:1.20.120.380 247 323 3.4E-24 T 25-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 SMD_RS07770 95838ad7fe71bccd73da9c1563a18bcc 308 Pfam PF05425 Copper resistance protein D 196 300 1.4E-23 T 25-04-2016 IPR008457 Copper resistance protein D GO:0016021 SMD_RS07770 95838ad7fe71bccd73da9c1563a18bcc 308 PANTHER PTHR34820 1 305 2.4E-25 T 25-04-2016 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 SUPERFAMILY SSF52279 372 608 2.22E-49 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 1.4E-18 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PRINTS PR00133 Glycosyl hydrolase family 3 signature 81 97 1.4E-18 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 1.4E-18 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 119 1.4E-18 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PRINTS PR00133 Glycosyl hydrolase family 3 signature 146 162 1.4E-18 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 Pfam PF14310 Fibronectin type III-like domain 642 711 6.2E-21 T 25-04-2016 IPR026891 Fibronectin type III-like domain SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 SMART SM01217 642 711 8.2E-31 T 25-04-2016 IPR026891 Fibronectin type III-like domain SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 372 605 7.5E-49 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 Gene3D G3DSA:3.20.20.300 2 350 2.4E-106 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PANTHER PTHR30620 4 29 1.8E-285 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PANTHER PTHR30620 55 724 1.8E-285 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 253 270 - T 25-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 330 2.6E-69 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 SUPERFAMILY SSF51445 3 371 1.16E-101 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PANTHER PTHR30620:SF5 4 29 1.8E-285 T 25-04-2016 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 PANTHER PTHR30620:SF5 55 724 1.8E-285 T 25-04-2016 SMD_RS02130 b7ca78c71aebf0d9715851ea6774c2ce 724 Gene3D G3DSA:3.40.50.1700 359 608 7.1E-67 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS14720 f60dc756972fdec4e7b7252c3d778a19 278 Gene3D G3DSA:1.10.3720.10 7 265 2.5E-67 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS14720 f60dc756972fdec4e7b7252c3d778a19 278 PANTHER PTHR32243 2 278 6.3E-160 T 25-04-2016 SMD_RS14720 f60dc756972fdec4e7b7252c3d778a19 278 SUPERFAMILY SSF161098 8 278 1.4E-75 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS14720 f60dc756972fdec4e7b7252c3d778a19 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 265 1.4E-22 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS14720 f60dc756972fdec4e7b7252c3d778a19 278 PANTHER PTHR32243:SF32 2 278 6.3E-160 T 25-04-2016 SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 Pfam PF09423 PhoD-like phosphatase 164 497 1.2E-97 T 25-04-2016 IPR018946 Alkaline phosphatase D-related SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 PANTHER PTHR22953:SF28 51 203 1.4E-102 T 25-04-2016 SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 PANTHER PTHR22953 353 389 1.4E-102 T 25-04-2016 SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 SUPERFAMILY SSF56300 160 497 1.14E-28 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 55 151 4.1E-30 T 25-04-2016 IPR032093 Phospholipase D, N-terminal SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 PANTHER PTHR22953:SF28 353 389 1.4E-102 T 25-04-2016 SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 PANTHER PTHR22953:SF28 231 336 1.4E-102 T 25-04-2016 SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 Gene3D G3DSA:3.60.21.10 161 496 4.2E-11 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 PANTHER PTHR22953 231 336 1.4E-102 T 25-04-2016 SMD_RS08935 6411fffd10c4bff5fa7f3129dc11ec6f 531 PANTHER PTHR22953 51 203 1.4E-102 T 25-04-2016 SMD_RS20220 85885b4ead63035f9a77f222202603d8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.2E-48 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMD_RS20220 85885b4ead63035f9a77f222202603d8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.647 T 25-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SMD_RS20220 85885b4ead63035f9a77f222202603d8 130 PANTHER PTHR21569 1 130 4.3E-72 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMD_RS20220 85885b4ead63035f9a77f222202603d8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 25-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SMD_RS20220 85885b4ead63035f9a77f222202603d8 130 SUPERFAMILY SSF54211 6 130 1.59E-47 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS20220 85885b4ead63035f9a77f222202603d8 130 Gene3D G3DSA:3.30.230.10 5 130 3.4E-51 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 PRINTS PR00465 E-class P450 group IV signature 349 367 1.5E-9 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 PRINTS PR00465 E-class P450 group IV signature 261 277 1.5E-9 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 PRINTS PR00465 E-class P450 group IV signature 310 328 1.5E-9 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 PRINTS PR00465 E-class P450 group IV signature 333 349 1.5E-9 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 SUPERFAMILY SSF48264 16 385 3.27E-35 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 Gene3D G3DSA:1.10.630.10 140 389 1.8E-34 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 Gene3D G3DSA:1.10.630.10 79 104 1.8E-34 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 PANTHER PTHR24305 222 389 1.4E-23 T 25-04-2016 SMD_RS09365 adf026a972008d2e851a51dcb6f3f27b 404 Pfam PF00067 Cytochrome P450 184 389 1.0E-27 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS20640 33064ae2eae81f74aa674cd4afec9e59 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 202 3.4E-82 T 25-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 SMD_RS20640 33064ae2eae81f74aa674cd4afec9e59 203 PANTHER PTHR11403 4 203 7.4E-102 T 25-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SMD_RS20640 33064ae2eae81f74aa674cd4afec9e59 203 SUPERFAMILY SSF81452 7 201 3.79E-59 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS20640 33064ae2eae81f74aa674cd4afec9e59 203 Pfam PF00510 Cytochrome c oxidase subunit III 20 201 7.4E-14 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS20640 33064ae2eae81f74aa674cd4afec9e59 203 Gene3D G3DSA:1.20.120.80 24 201 1.3E-52 T 25-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SMD_RS20640 33064ae2eae81f74aa674cd4afec9e59 203 PANTHER PTHR11403:SF2 4 203 7.4E-102 T 25-04-2016 SMD_RS08020 47449feee4f9abeaeb0e1f9875c42dd8 182 Pfam PF11072 Protein of unknown function (DUF2859) 34 180 3.9E-55 T 25-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 SMD_RS08020 47449feee4f9abeaeb0e1f9875c42dd8 182 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 182 1.2E-42 T 25-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 SMD_RS17195 be048733ed3e5f1ee6843afa4a111422 351 Pfam PF13103 TonB C terminal 262 346 1.1E-12 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS17195 be048733ed3e5f1ee6843afa4a111422 351 SUPERFAMILY SSF74653 258 347 2.16E-9 T 25-04-2016 SMD_RS17195 be048733ed3e5f1ee6843afa4a111422 351 TIGRFAM TIGR02794 tolA_full: protein TolA 19 345 7.6E-37 T 25-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SMD_RS17195 be048733ed3e5f1ee6843afa4a111422 351 Gene3D G3DSA:3.30.1150.10 239 350 1.9E-19 T 25-04-2016 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 554 22.989 T 25-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 Pfam PF02096 60Kd inner membrane protein 373 552 4.9E-59 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 Pfam PF14849 YidC periplasmic domain 80 362 1.6E-71 T 25-04-2016 IPR028053 Membrane insertase YidC, N-terminal SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 84 105 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 177 197 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 233 251 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 481 503 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 267 282 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 518 541 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR00701 60kDa inner membrane protein signature 434 457 1.0E-49 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PANTHER PTHR12428:SF14 184 550 1.1E-112 T 25-04-2016 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PANTHER PTHR12428 184 550 1.1E-112 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 372 552 1.0E-69 T 25-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 371 4.6E-78 T 25-04-2016 IPR028053 Membrane insertase YidC, N-terminal SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR01900 YidC translocation/secretion protein signature 358 374 2.3E-19 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR01900 YidC translocation/secretion protein signature 487 502 2.3E-19 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS21965 20f544f4a224c06cfc64d6fe41fd7504 571 PRINTS PR01900 YidC translocation/secretion protein signature 507 531 2.3E-19 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 SUPERFAMILY SSF52374 1 219 2.2E-47 T 25-04-2016 SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 6.6E-11 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 Gene3D G3DSA:3.40.50.620 5 218 1.6E-58 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 216 3.0E-42 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 217 27.798 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 Pfam PF01467 Cytidylyltransferase-like 6 167 5.7E-26 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMD_RS15905 3ff0683d4c2a03cdada192722abc09af 221 PANTHER PTHR12039 7 219 2.6E-33 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS12865 eab0e8695692a7009f64e68570925d38 176 SUPERFAMILY SSF54427 29 170 1.48E-14 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS12865 eab0e8695692a7009f64e68570925d38 176 Gene3D G3DSA:3.10.450.50 73 169 1.2E-6 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS02550 435286a3d56c151f0a198d395488485c 256 Pfam PF04397 LytTr DNA-binding domain 163 255 6.9E-21 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 Gene3D G3DSA:3.40.50.2300 2 126 8.4E-33 T 25-04-2016 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 Gene3D G3DSA:2.40.50.40 153 219 2.0E-16 T 25-04-2016 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 SMART SM00448 3 115 1.7E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 SUPERFAMILY SSF52172 4 159 2.85E-33 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS02550 435286a3d56c151f0a198d395488485c 256 Pfam PF00072 Response regulator receiver domain 6 113 2.8E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 PANTHER PTHR26402:SF524 3 256 3.0E-55 T 25-04-2016 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 SMART SM00850 160 256 3.8E-22 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS02550 435286a3d56c151f0a198d395488485c 256 PANTHER PTHR26402 3 256 3.0E-55 T 25-04-2016 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 Gene3D G3DSA:3.40.50.2300 10 135 8.3E-36 T 25-04-2016 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 Gene3D G3DSA:1.10.10.10 141 240 2.3E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 SMART SM00448 15 125 3.1E-34 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 Pfam PF00072 Response regulator receiver domain 17 125 4.5E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 SMART SM00862 162 238 1.5E-27 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 SUPERFAMILY SSF52172 5 137 3.84E-38 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 3.5E-26 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 PANTHER PTHR26402:SF292 15 240 8.2E-91 T 25-04-2016 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 PANTHER PTHR26402 15 240 8.2E-91 T 25-04-2016 SMD_RS17315 2c6b0a1310cfa9495b89102c7d606faf 245 SUPERFAMILY SSF46894 139 239 1.84E-29 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS04320 83e5dce192dbe5cceebc9da64d342714 540 PANTHER PTHR11895:SF8 47 528 6.2E-195 T 25-04-2016 SMD_RS04320 83e5dce192dbe5cceebc9da64d342714 540 SUPERFAMILY SSF75304 44 527 1.57E-130 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMD_RS04320 83e5dce192dbe5cceebc9da64d342714 540 Gene3D G3DSA:3.90.1300.10 45 529 2.5E-156 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMD_RS04320 83e5dce192dbe5cceebc9da64d342714 540 Pfam PF01425 Amidase 67 510 1.3E-94 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMD_RS04320 83e5dce192dbe5cceebc9da64d342714 540 PANTHER PTHR11895 47 528 6.2E-195 T 25-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 Gene3D G3DSA:1.10.10.60 225 260 3.9E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 PANTHER PTHR11019:SF53 23 258 2.8E-44 T 25-04-2016 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 Pfam PF12833 Helix-turn-helix domain 183 260 5.5E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 255 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 Gene3D G3DSA:2.60.120.10 9 89 1.2E-6 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 PANTHER PTHR11019 23 258 2.8E-44 T 25-04-2016 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 SUPERFAMILY SSF46689 214 260 1.52E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 SMART SM00342 176 259 2.1E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 SUPERFAMILY SSF51182 12 186 1.96E-13 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 Gene3D G3DSA:1.10.10.60 155 215 8.3E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 2.1E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS21060 7d4f9e42522e164d3d8cf420f7472ccd 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 2.1E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS15765 40cc46a6063901d39891c00a3f484cb3 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 2 74 6.7E-17 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS15765 40cc46a6063901d39891c00a3f484cb3 100 Gene3D G3DSA:1.10.10.10 2 78 8.2E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS15765 40cc46a6063901d39891c00a3f484cb3 100 PANTHER PTHR10815 1 99 5.3E-35 T 25-04-2016 SMD_RS15765 40cc46a6063901d39891c00a3f484cb3 100 SUPERFAMILY SSF46767 2 75 1.57E-16 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMD_RS15765 40cc46a6063901d39891c00a3f484cb3 100 PANTHER PTHR10815:SF10 1 99 5.3E-35 T 25-04-2016 SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 SMART SM00729 30 247 2.6E-52 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 Pfam PF06969 HemN C-terminal domain 336 395 6.2E-11 T 25-04-2016 IPR010723 HemN, C-terminal SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 PANTHER PTHR13932:SF7 24 408 5.3E-198 T 25-04-2016 SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 PANTHER PTHR13932 24 408 5.3E-198 T 25-04-2016 SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 SUPERFAMILY SSF102114 21 406 1.57E-108 T 25-04-2016 SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 Pfam PF04055 Radical SAM superfamily 35 200 4.9E-21 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 31 376 2.0E-104 T 25-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SMD_RS17950 2cc088a9f5027373f9f7f7b4639702a7 408 Gene3D G3DSA:3.80.30.20 31 262 1.2E-31 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 PANTHER PTHR30126:SF6 1 309 7.9E-80 T 25-04-2016 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 PANTHER PTHR30126 1 309 7.9E-80 T 25-04-2016 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 SUPERFAMILY SSF46785 1 88 5.6E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 Pfam PF03466 LysR substrate binding domain 89 291 1.8E-39 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 Gene3D G3DSA:3.40.190.10 176 264 1.7E-19 T 25-04-2016 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.9E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 Gene3D G3DSA:3.40.190.10 275 284 2.5E-16 T 25-04-2016 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 Gene3D G3DSA:3.40.190.10 90 175 2.5E-16 T 25-04-2016 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.5E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.5E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.5E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 Gene3D G3DSA:1.10.10.10 1 86 2.4E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17630 942c0d77bce256c0fbb3f9c5e70e40dc 327 SUPERFAMILY SSF53850 91 297 8.39E-36 T 25-04-2016 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 Pfam PF03841 L-seryl-tRNA selenium transferase 92 457 2.3E-155 T 25-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 474 225.604 T 25-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 PANTHER PTHR32328:SF0 5 463 2.1E-187 T 25-04-2016 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 Pfam PF12390 Selenocysteine synthase N terminal 13 50 3.9E-6 T 25-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 SUPERFAMILY SSF53383 85 353 3.58E-42 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 Gene3D G3DSA:3.40.640.10 97 327 8.0E-33 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 12 468 8.5E-172 T 25-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMD_RS17910 991ed2c00b6c271139d7af51b3d1cbab 474 PANTHER PTHR32328 5 463 2.1E-187 T 25-04-2016 SMD_RS13945 34d4e31c43ba87041b57094e018b8888 115 PANTHER PTHR33204 1 106 6.6E-46 T 25-04-2016 SMD_RS13945 34d4e31c43ba87041b57094e018b8888 115 PANTHER PTHR33204:SF5 1 106 6.6E-46 T 25-04-2016 SMD_RS13945 34d4e31c43ba87041b57094e018b8888 115 SUPERFAMILY SSF46785 10 105 6.42E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13945 34d4e31c43ba87041b57094e018b8888 115 Pfam PF01638 HxlR-like helix-turn-helix 20 106 3.1E-34 T 25-04-2016 IPR002577 Helix-turn-helix, HxlR type SMD_RS13945 34d4e31c43ba87041b57094e018b8888 115 Gene3D G3DSA:1.10.10.10 9 106 6.3E-41 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12250 59c51753e070caa0e411ecf6043afa0a 171 PANTHER PTHR36439:SF1 1 170 3.7E-39 T 25-04-2016 SMD_RS12250 59c51753e070caa0e411ecf6043afa0a 171 PANTHER PTHR36439 1 170 3.7E-39 T 25-04-2016 SMD_RS12250 59c51753e070caa0e411ecf6043afa0a 171 SUPERFAMILY SSF160379 1 167 2.88E-44 T 25-04-2016 SMD_RS12250 59c51753e070caa0e411ecf6043afa0a 171 PIRSF PIRSF008502 1 170 1.1E-34 T 25-04-2016 IPR012545 Protein of unknown function DUF1697 SMD_RS12250 59c51753e070caa0e411ecf6043afa0a 171 Pfam PF08002 Protein of unknown function (DUF1697) 1 132 1.6E-36 T 25-04-2016 IPR012545 Protein of unknown function DUF1697 SMD_RS12250 59c51753e070caa0e411ecf6043afa0a 171 Gene3D G3DSA:3.30.70.1280 1 87 2.8E-27 T 25-04-2016 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 SUPERFAMILY SSF55874 192 338 3.54E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 338 4.1E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 Gene3D G3DSA:3.30.450.20 10 61 3.6E-6 T 25-04-2016 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 SMART SM00387 228 341 3.9E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 Gene3D G3DSA:1.10.287.130 123 182 5.3E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 183 4.4E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 9.1E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 9.1E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 9.1E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 SUPERFAMILY SSF47384 120 182 4.51E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 SUPERFAMILY SSF55785 10 67 1.93E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PANTHER PTHR24423 273 339 6.3E-61 T 25-04-2016 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PANTHER PTHR24423 30 257 6.3E-61 T 25-04-2016 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 Gene3D G3DSA:3.30.565.10 191 339 2.3E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 SMART SM00388 122 189 1.0E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PANTHER PTHR24423:SF488 273 339 6.3E-61 T 25-04-2016 SMD_RS00720 fe3550c71c942944b520b753d09cde82 353 PANTHER PTHR24423:SF488 30 257 6.3E-61 T 25-04-2016 SMD_RS21290 c88767733b88874adb9c831172414eb3 256 SUPERFAMILY SSF53448 16 243 1.86E-33 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS21290 c88767733b88874adb9c831172414eb3 256 PANTHER PTHR10859 15 253 2.2E-83 T 25-04-2016 SMD_RS21290 c88767733b88874adb9c831172414eb3 256 PANTHER PTHR10859:SF84 15 253 2.2E-83 T 25-04-2016 SMD_RS21290 c88767733b88874adb9c831172414eb3 256 Pfam PF00535 Glycosyl transferase family 2 16 133 5.0E-21 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS21290 c88767733b88874adb9c831172414eb3 256 Gene3D G3DSA:3.90.550.10 16 134 8.4E-16 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Gene3D G3DSA:2.150.10.10 1178 1297 2.8E-20 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Gene3D G3DSA:2.150.10.10 1787 1820 7.2E-5 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Gene3D G3DSA:2.150.10.10 1539 1653 3.9E-17 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Gene3D G3DSA:2.150.10.10 1682 1773 8.1E-24 T 25-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1231 1257 1.1E-5 T 25-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1556 1582 2.4E-4 T 25-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.2E-8 T 25-04-2016 IPR024973 ESPR domain SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 SUPERFAMILY SSF101967 926 1084 3.4E-15 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 SUPERFAMILY SSF101967 1683 1772 3.01E-19 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1631 1651 2.7E-6 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1750 1770 4.7E-7 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1274 1294 4.0E-8 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1061 1081 1.7E-7 T 25-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 SUPERFAMILY SSF101967 1177 1296 7.19E-19 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 PANTHER PTHR35843 1808 1928 6.7E-42 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 PANTHER PTHR35843 1598 1754 6.7E-42 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 PANTHER PTHR35843 1534 1580 6.7E-42 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 PANTHER PTHR35843:SF2 1808 1928 6.7E-42 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 PANTHER PTHR35843:SF2 1598 1754 6.7E-42 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 PANTHER PTHR35843:SF2 1534 1580 6.7E-42 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 SUPERFAMILY SSF54523 1815 1930 5.49E-23 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Gene3D G3DSA:3.30.1300.30 1821 1930 1.2E-30 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 SUPERFAMILY SSF101967 1787 1825 2.75E-6 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 SUPERFAMILY SSF101967 1539 1653 2.62E-14 T 25-04-2016 SMD_RS13120 c83f18d91381d11b6fe027d1225055f5 1930 Gene3D G3DSA:1.20.5.170 1447 1535 7.6E-4 T 25-04-2016 SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PANTHER PTHR24322 155 187 3.2E-56 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PANTHER PTHR24322 12 139 3.2E-56 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PANTHER PTHR24322:SF620 155 187 3.2E-56 T 25-04-2016 SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PANTHER PTHR24322:SF620 12 139 3.2E-56 T 25-04-2016 SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.9E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.9E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.9E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 2.4E-57 T 25-04-2016 SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 SUPERFAMILY SSF51735 9 246 2.33E-75 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 Gene3D G3DSA:3.40.50.720 6 247 1.6E-75 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS12420 173139554f90514d103abf5d08d8a7dd 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 186 1.6E-6 T 25-04-2016 SMD_RS04315 9844ae8e2aa8820c62cc564dc61de1d8 380 SUPERFAMILY SSF50182 177 242 1.14E-13 T 25-04-2016 IPR010920 LSM domain SMD_RS04315 9844ae8e2aa8820c62cc564dc61de1d8 380 Pfam PF00924 Mechanosensitive ion channel 136 280 2.6E-21 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMD_RS04315 9844ae8e2aa8820c62cc564dc61de1d8 380 PANTHER PTHR30566:SF10 3 368 1.1E-143 T 25-04-2016 SMD_RS04315 9844ae8e2aa8820c62cc564dc61de1d8 380 Gene3D G3DSA:2.30.30.60 192 241 1.7E-6 T 25-04-2016 SMD_RS04315 9844ae8e2aa8820c62cc564dc61de1d8 380 PANTHER PTHR30566 3 368 1.1E-143 T 25-04-2016 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PANTHER PTHR22807:SF30 49 441 1.1E-95 T 25-04-2016 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 Gene3D G3DSA:3.30.70.1170 179 236 2.5E-20 T 25-04-2016 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 SUPERFAMILY SSF48013 18 154 1.13E-26 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 SUPERFAMILY SSF53335 147 441 2.01E-65 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 Gene3D G3DSA:1.10.940.10 16 156 9.4E-35 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 257 267 2.2E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 424 441 2.2E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 228 242 2.2E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 325 337 2.2E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 375 391 2.2E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 324 335 - T 25-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 19 442 7.9E-104 T 25-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 PANTHER PTHR22807 49 441 1.1E-95 T 25-04-2016 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 Gene3D G3DSA:3.40.50.150 239 441 2.0E-45 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 Pfam PF01189 16S rRNA methyltransferase RsmB/F 247 439 6.4E-50 T 25-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS19635 2de228633e66b01da862e0a29af5ea6b 443 Pfam PF01029 NusB family 17 139 1.3E-19 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 9.8E-37 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 9.8E-37 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 9.8E-37 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 9.8E-37 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 9.8E-37 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 SUPERFAMILY SSF53098 3 156 4.05E-46 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 25-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 7.8E-50 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 PANTHER PTHR30194 1 171 8.8E-59 T 25-04-2016 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 Gene3D G3DSA:3.30.420.10 3 156 1.6E-54 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 43.77 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS17230 fa6f4b4a60431ccecf800ad9ac7334d1 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 1.6E-53 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMD_RS12460 ba0dec451c5513ab0e320e9fcfdc0fa3 107 SUPERFAMILY SSF52833 22 97 9.05E-18 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS12460 ba0dec451c5513ab0e320e9fcfdc0fa3 107 Pfam PF00085 Thioredoxin 17 99 5.2E-13 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMD_RS12460 ba0dec451c5513ab0e320e9fcfdc0fa3 107 Gene3D G3DSA:3.40.30.10 17 100 1.5E-15 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Gene3D G3DSA:3.40.50.800 531 631 4.7E-33 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 SUPERFAMILY SSF55681 243 526 3.64E-95 T 25-04-2016 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Gene3D G3DSA:3.10.20.30 1 64 6.1E-23 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PANTHER PTHR11451 1 629 0.0 T 25-04-2016 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.4E-216 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 SUPERFAMILY SSF52954 529 630 1.18E-30 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.472 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Pfam PF02824 TGS domain 2 61 7.1E-11 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Gene3D G3DSA:3.30.980.10 65 129 1.4E-39 T 25-04-2016 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Gene3D G3DSA:3.30.980.10 188 224 1.4E-39 T 25-04-2016 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 529 2.6E-41 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 SMART SM00863 170 219 1.1E-19 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 219 9.3E-14 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PANTHER PTHR11451:SF31 1 629 0.0 T 25-04-2016 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 5.8E-51 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 5.8E-51 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 5.8E-51 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 5.8E-51 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 5.8E-51 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 SUPERFAMILY SSF81271 2 61 4.25E-15 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 SUPERFAMILY SSF55186 63 240 9.81E-64 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Pfam PF03129 Anticodon binding domain 541 630 1.4E-20 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Gene3D G3DSA:3.30.54.20 130 187 3.0E-18 T 25-04-2016 SMD_RS15340 0e87fa8a9ddae47e475532c5eb921483 633 Gene3D G3DSA:3.30.930.10 242 530 1.4E-115 T 25-04-2016 SMD_RS05465 de904191686553434bffe80295fab316 182 SUPERFAMILY SSF56784 18 176 1.03E-36 T 25-04-2016 IPR023214 HAD-like domain SMD_RS05465 de904191686553434bffe80295fab316 182 Gene3D G3DSA:3.40.50.1000 14 177 4.1E-42 T 25-04-2016 IPR023214 HAD-like domain SMD_RS05465 de904191686553434bffe80295fab316 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 171 4.1E-36 T 25-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS05465 de904191686553434bffe80295fab316 182 PIRSF PIRSF006118 8 181 6.3E-60 T 25-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS05465 de904191686553434bffe80295fab316 182 PANTHER PTHR21485 17 174 1.8E-38 T 25-04-2016 SMD_RS05465 de904191686553434bffe80295fab316 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 153 2.5E-6 T 25-04-2016 IPR023214 HAD-like domain SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 SUPERFAMILY SSF51735 400 531 1.36E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 282 4.8E-78 T 25-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 1.0E-62 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 PANTHER PTHR16254 10 556 1.7E-227 T 25-04-2016 SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 Pfam PF02254 TrkA-N domain 403 511 9.5E-25 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 Gene3D G3DSA:3.40.50.720 397 513 3.4E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21215 9d4d43dacaa52ccf4f6735f62a35ddab 592 PANTHER PTHR16254:SF6 10 556 1.7E-227 T 25-04-2016 SMD_RS03225 00f85ce9b8e0c15e3ff15ba721745a78 179 Gene3D G3DSA:2.60.40.1090 24 179 2.1E-29 T 25-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SMD_RS03225 00f85ce9b8e0c15e3ff15ba721745a78 179 Pfam PF16970 Type-1 fimbrial protein, A 51 179 7.1E-30 T 25-04-2016 SMD_RS03225 00f85ce9b8e0c15e3ff15ba721745a78 179 PANTHER PTHR33420 1 179 8.8E-45 T 25-04-2016 SMD_RS03225 00f85ce9b8e0c15e3ff15ba721745a78 179 SUPERFAMILY SSF49401 25 179 1.74E-27 T 25-04-2016 IPR008966 Adhesion domain SMD_RS07925 e93af89baa9c0e0a57ca0bda390e77b6 963 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 54 954 0.0 T 25-04-2016 IPR022303 Conjugative transfer ATPase SMD_RS07925 e93af89baa9c0e0a57ca0bda390e77b6 963 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 65 343 3.9E-72 T 25-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase SMD_RS07925 e93af89baa9c0e0a57ca0bda390e77b6 963 SUPERFAMILY SSF52540 487 614 4.68E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07925 e93af89baa9c0e0a57ca0bda390e77b6 963 SUPERFAMILY SSF52540 650 884 4.68E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07925 e93af89baa9c0e0a57ca0bda390e77b6 963 Gene3D G3DSA:3.40.50.300 744 867 2.2E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07925 e93af89baa9c0e0a57ca0bda390e77b6 963 Gene3D G3DSA:3.40.50.300 532 603 2.2E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 PANTHER PTHR10992 263 315 5.5E-12 T 25-04-2016 SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 PANTHER PTHR10992 90 239 5.5E-12 T 25-04-2016 SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 SUPERFAMILY SSF53474 88 318 1.29E-34 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 Pfam PF12146 Serine aminopeptidase, S33 95 314 1.0E-8 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 Gene3D G3DSA:3.40.50.1820 247 356 6.4E-39 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 Gene3D G3DSA:3.40.50.1820 46 191 6.4E-39 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS20695 5534f6ec79260fe2c6524c53bd07e5e4 359 PIRSF PIRSF031982 6 359 5.0E-75 T 25-04-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL SMD_RS06070 ead1d96ff7a9ae7c9e6bdb9e5c308c78 211 Pfam PF01810 LysE type translocator 24 208 4.6E-28 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS06070 ead1d96ff7a9ae7c9e6bdb9e5c308c78 211 PANTHER PTHR30086 11 210 7.5E-51 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS06070 ead1d96ff7a9ae7c9e6bdb9e5c308c78 211 PANTHER PTHR30086:SF0 11 210 7.5E-51 T 25-04-2016 SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 PANTHER PTHR11562:SF17 3 295 1.3E-103 T 25-04-2016 SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 SUPERFAMILY SSF161111 15 210 1.96E-57 T 25-04-2016 SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 Gene3D G3DSA:1.20.1510.10 16 209 8.5E-61 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 PANTHER PTHR11562 3 295 1.3E-103 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 Pfam PF01545 Cation efflux family 20 209 5.1E-46 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 289 2.5E-85 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS06640 a42815aa5772f81239dee672d2c23797 326 SUPERFAMILY SSF160240 217 286 2.22E-8 T 25-04-2016 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 SMART SM00421 146 203 2.5E-20 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 SUPERFAMILY SSF46894 143 210 1.97E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 PANTHER PTHR26402 3 203 3.8E-71 T 25-04-2016 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 Gene3D G3DSA:3.40.50.2300 2 120 9.9E-33 T 25-04-2016 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 1.1E-18 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 Pfam PF00072 Response regulator receiver domain 5 116 2.9E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.1E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.1E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.1E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 PANTHER PTHR26402:SF506 3 203 3.8E-71 T 25-04-2016 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 Gene3D G3DSA:1.10.10.10 121 211 2.1E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 SMART SM00448 3 116 3.7E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS09110 fa945c1fc36b0b5e59524a37f668a891 215 SUPERFAMILY SSF52172 2 132 3.98E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 PANTHER PTHR34475:SF1 3 287 2.3E-41 T 25-04-2016 SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 Gene3D G3DSA:1.10.260.40 17 85 5.7E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 Pfam PF13464 Domain of unknown function (DUF4115) 206 279 3.1E-19 T 25-04-2016 IPR025194 Domain of unknown function DUF4115 SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 PANTHER PTHR34475 3 287 2.3E-41 T 25-04-2016 SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 SUPERFAMILY SSF47413 17 82 1.25E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 SMART SM00530 19 80 1.5E-4 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS09775 a2e97a799e3d8d184d5297abb4a6c3d1 290 Pfam PF13413 Helix-turn-helix domain 19 77 3.0E-20 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.9E-46 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 PANTHER PTHR11910 8 174 1.4E-44 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 Gene3D G3DSA:1.10.520.20 3 103 2.4E-21 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 4.5E-33 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 1.6E-21 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 1.6E-21 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 1.6E-21 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 1.6E-21 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.6E-21 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 SUPERFAMILY SSF47928 3 103 1.83E-18 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMD_RS19155 386650f25507bef6cc30770ddc5a765c 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 18.476 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMD_RS08230 c759f5e68ad87717b1c4f84b47b172b6 559 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 1.7E-119 T 25-04-2016 IPR022304 Integrating conjugative element, PFGI-1, ParB SMD_RS08230 c759f5e68ad87717b1c4f84b47b172b6 559 SUPERFAMILY SSF110849 37 140 8.89E-10 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS08230 c759f5e68ad87717b1c4f84b47b172b6 559 Gene3D G3DSA:3.90.1530.10 37 104 8.7E-8 T 25-04-2016 SMD_RS03170 e7b52008dfaeea30904d4b7b546e7145 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS03170 e7b52008dfaeea30904d4b7b546e7145 139 SUPERFAMILY SSF54523 8 87 6.67E-5 T 25-04-2016 SMD_RS03170 e7b52008dfaeea30904d4b7b546e7145 139 PANTHER PTHR38779 1 134 2.0E-29 T 25-04-2016 SMD_RS03170 e7b52008dfaeea30904d4b7b546e7145 139 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 26 5.8E-7 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS03170 e7b52008dfaeea30904d4b7b546e7145 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.6E-4 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS03170 e7b52008dfaeea30904d4b7b546e7145 139 PANTHER PTHR38779:SF1 1 134 2.0E-29 T 25-04-2016 SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 SUPERFAMILY SSF52833 2 78 4.26E-21 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 155 211 2.7E-6 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 Gene3D G3DSA:3.40.30.10 5 93 2.0E-21 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 Gene3D G3DSA:1.20.1050.10 94 216 1.5E-22 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 PANTHER PTHR11260 1 216 6.3E-96 T 25-04-2016 SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 PANTHER PTHR11260:SF282 1 216 6.3E-96 T 25-04-2016 SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 2.0E-16 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS09615 ee94cc96535e329df56b156935ad4cd8 229 SUPERFAMILY SSF47616 88 217 5.01E-23 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS08820 1d635ca47d44e918f337616728926787 124 Gene3D G3DSA:3.40.1230.10 16 122 1.2E-33 T 25-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SMD_RS08820 1d635ca47d44e918f337616728926787 124 PANTHER PTHR21192 3 124 2.9E-41 T 25-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SMD_RS08820 1d635ca47d44e918f337616728926787 124 SUPERFAMILY SSF64076 1 122 1.7E-32 T 25-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SMD_RS08820 1d635ca47d44e918f337616728926787 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 121 5.7E-26 T 25-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SMD_RS08820 1d635ca47d44e918f337616728926787 124 PANTHER PTHR21192:SF3 3 124 2.9E-41 T 25-04-2016 SMD_RS03065 173a4c09e8900d072d0f338e67046a21 258 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 192 4.4E-33 T 25-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SMD_RS03065 173a4c09e8900d072d0f338e67046a21 258 PANTHER PTHR15362 11 149 6.5E-31 T 25-04-2016 SMD_RS03065 173a4c09e8900d072d0f338e67046a21 258 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS03065 173a4c09e8900d072d0f338e67046a21 258 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 3.5E-14 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 Gene3D G3DSA:1.20.1250.20 16 222 2.4E-23 T 25-04-2016 SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 Gene3D G3DSA:1.20.1250.20 244 422 2.2E-19 T 25-04-2016 SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 PANTHER PTHR23508 15 425 8.4E-201 T 25-04-2016 SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 PANTHER PTHR23508:SF16 15 425 8.4E-201 T 25-04-2016 SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 SUPERFAMILY SSF103473 14 428 4.71E-67 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 Pfam PF07690 Major Facilitator Superfamily 273 421 5.7E-12 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS07345 eabf1da75f182a4860821d7cc0081151 433 Pfam PF00083 Sugar (and other) transporter 19 220 5.4E-23 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS20795 d80c56113c0f94c60318d1577c59b2e3 312 Gene3D G3DSA:3.30.420.40 9 140 3.6E-34 T 25-04-2016 SMD_RS20795 d80c56113c0f94c60318d1577c59b2e3 312 SUPERFAMILY SSF53067 10 308 5.56E-57 T 25-04-2016 SMD_RS20795 d80c56113c0f94c60318d1577c59b2e3 312 Pfam PF00480 ROK family 9 307 3.4E-64 T 25-04-2016 IPR000600 ROK family SMD_RS20795 d80c56113c0f94c60318d1577c59b2e3 312 Gene3D G3DSA:3.30.420.40 141 287 6.5E-43 T 25-04-2016 SMD_RS20795 d80c56113c0f94c60318d1577c59b2e3 312 PANTHER PTHR18964 10 305 2.4E-81 T 25-04-2016 SMD_RS20795 d80c56113c0f94c60318d1577c59b2e3 312 PANTHER PTHR18964:SF134 10 305 2.4E-81 T 25-04-2016 SMD_RS10470 1cabe2087275d23567923c1ab99582bb 298 PANTHER PTHR10277:SF40 1 294 1.8E-176 T 25-04-2016 SMD_RS10470 1cabe2087275d23567923c1ab99582bb 298 SUPERFAMILY SSF51569 1 288 3.81E-72 T 25-04-2016 SMD_RS10470 1cabe2087275d23567923c1ab99582bb 298 Gene3D G3DSA:3.20.20.70 3 289 1.0E-91 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS10470 1cabe2087275d23567923c1ab99582bb 298 Pfam PF00682 HMGL-like 5 275 4.3E-52 T 25-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SMD_RS10470 1cabe2087275d23567923c1ab99582bb 298 PANTHER PTHR10277 1 294 1.8E-176 T 25-04-2016 SMD_RS04415 ff74b4ce9972edf30a0fba088aac6708 231 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 227 1.7E-52 T 25-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SMD_RS04415 ff74b4ce9972edf30a0fba088aac6708 231 SUPERFAMILY SSF56935 54 213 2.24E-6 T 25-04-2016 SMD_RS04415 ff74b4ce9972edf30a0fba088aac6708 231 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 25 212 9.7E-31 T 25-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 238 3.3E-65 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 25-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 40.585 T 25-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 PANTHER PTHR21139 1 250 1.0E-115 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 Gene3D G3DSA:3.20.20.70 1 249 1.1E-97 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 Pfam PF00121 Triosephosphate isomerase 4 244 1.1E-87 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMD_RS15495 008798a618b447bc36f215e037c4ac3b 251 SUPERFAMILY SSF51351 1 247 3.14E-87 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 Gene3D G3DSA:3.40.190.10 89 181 1.4E-13 T 25-04-2016 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 SUPERFAMILY SSF46785 6 111 8.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 Gene3D G3DSA:1.10.10.10 6 88 9.3E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 PANTHER PTHR30126:SF25 1 292 4.5E-156 T 25-04-2016 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 Pfam PF03466 LysR substrate binding domain 88 292 8.3E-35 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 SUPERFAMILY SSF53850 88 293 1.71E-35 T 25-04-2016 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 Gene3D G3DSA:3.40.190.10 182 260 6.1E-17 T 25-04-2016 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.9E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 PANTHER PTHR30126 1 292 4.5E-156 T 25-04-2016 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11865 9e6b5235ceefec1349bbe81c660d430a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 1.4E-19 T 25-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 6.6E-66 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 5.7E-35 T 25-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Gene3D G3DSA:3.30.230.40 169 255 3.5E-39 T 25-04-2016 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Gene3D G3DSA:3.40.50.1000 3 155 1.5E-34 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 SUPERFAMILY SSF54211 254 343 2.28E-31 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 357 52.606 T 25-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Gene3D G3DSA:3.30.230.40 260 357 5.1E-33 T 25-04-2016 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 25-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 5 128 1.5E-4 T 25-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 PANTHER PTHR23133 165 357 7.4E-163 T 25-04-2016 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 PANTHER PTHR23133 9 95 7.4E-163 T 25-04-2016 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 2.6E-71 T 25-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.454 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 SUPERFAMILY SSF56784 1 149 1.84E-33 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 SUPERFAMILY SSF54211 169 253 6.96E-32 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 PANTHER PTHR23133:SF2 165 357 7.4E-163 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 PANTHER PTHR23133:SF2 9 95 7.4E-163 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMD_RS10275 2edadccdd8371fb2930f18f1d070bc16 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 25-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 PANTHER PTHR12147:SF16 11 203 2.3E-155 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 PANTHER PTHR12147:SF16 243 472 2.3E-155 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 PANTHER PTHR12147:SF16 488 541 2.3E-155 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 SUPERFAMILY SSF53187 22 70 8.89E-63 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 SUPERFAMILY SSF53187 282 526 8.89E-63 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 Pfam PF02225 PA domain 130 216 4.1E-5 T 25-04-2016 IPR003137 PA domain SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 Gene3D G3DSA:3.40.630.10 290 534 8.6E-61 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 Gene3D G3DSA:3.40.630.10 20 77 8.6E-61 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 Pfam PF04389 Peptidase family M28 298 501 1.8E-47 T 25-04-2016 IPR007484 Peptidase M28 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 PANTHER PTHR12147 11 203 2.3E-155 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 PANTHER PTHR12147 243 472 2.3E-155 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 PANTHER PTHR12147 488 541 2.3E-155 T 25-04-2016 SMD_RS02540 c0adab83920ef28a04d56b21a6118122 549 SUPERFAMILY SSF52025 122 212 1.15E-7 T 25-04-2016 SMD_RS19840 a18171a7e6e53630cfdb184c3e4d92ad 187 PANTHER PTHR10681:SF107 47 142 1.6E-18 T 25-04-2016 SMD_RS19840 a18171a7e6e53630cfdb184c3e4d92ad 187 SUPERFAMILY SSF52833 41 187 3.05E-27 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19840 a18171a7e6e53630cfdb184c3e4d92ad 187 PANTHER PTHR10681 47 142 1.6E-18 T 25-04-2016 SMD_RS19840 a18171a7e6e53630cfdb184c3e4d92ad 187 ProSitePatterns PS00194 Thioredoxin family active site. 80 98 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS19840 a18171a7e6e53630cfdb184c3e4d92ad 187 Gene3D G3DSA:3.40.30.10 32 182 6.5E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS19840 a18171a7e6e53630cfdb184c3e4d92ad 187 Pfam PF08534 Redoxin 50 178 1.3E-19 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 PANTHER PTHR24220 38 250 2.8E-96 T 25-04-2016 SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 SUPERFAMILY SSF52540 44 247 1.41E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 Pfam PF00005 ABC transporter 53 185 6.1E-20 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 Gene3D G3DSA:2.70.50.60 317 453 4.5E-34 T 25-04-2016 SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 SMART SM00382 62 233 1.5E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 PANTHER PTHR24220:SF117 38 250 2.8E-96 T 25-04-2016 SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 Pfam PF14524 Wzt C-terminal domain 318 445 2.6E-31 T 25-04-2016 IPR029439 Wzt, C-terminal SMD_RS02900 533463353cc37e0ec2c7ef06dea104c2 473 Gene3D G3DSA:3.40.50.300 9 248 3.3E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06185 145361414e55521c330ba812aa7f9190 251 PIRSF PIRSF037208 4 250 4.4E-87 T 25-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SMD_RS06185 145361414e55521c330ba812aa7f9190 251 PANTHER PTHR21367:SF0 12 247 1.4E-74 T 25-04-2016 SMD_RS06185 145361414e55521c330ba812aa7f9190 251 Gene3D G3DSA:3.40.630.30 87 216 9.2E-5 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06185 145361414e55521c330ba812aa7f9190 251 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 89 3.4E-16 T 25-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 SMD_RS06185 145361414e55521c330ba812aa7f9190 251 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 111 236 3.6E-37 T 25-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 SMD_RS06185 145361414e55521c330ba812aa7f9190 251 SUPERFAMILY SSF55729 83 242 2.88E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06185 145361414e55521c330ba812aa7f9190 251 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 5 245 42.167 T 25-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SMD_RS06185 145361414e55521c330ba812aa7f9190 251 PANTHER PTHR21367 12 247 1.4E-74 T 25-04-2016 IPR030700 Arginine-tRNA-protein transferase SMD_RS03110 888bf2cf080e6e47bd220bac7b5adb1d 368 PANTHER PTHR33529 2 367 5.2E-104 T 25-04-2016 SMD_RS03110 888bf2cf080e6e47bd220bac7b5adb1d 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 365 8.2E-102 T 25-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 SMD_RS03110 888bf2cf080e6e47bd220bac7b5adb1d 368 PANTHER PTHR33529:SF1 2 367 5.2E-104 T 25-04-2016 SMD_RS03110 888bf2cf080e6e47bd220bac7b5adb1d 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 365 3.2E-64 T 25-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 449 3.2E-94 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Gene3D G3DSA:3.30.1360.120 5 123 1.8E-42 T 25-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Gene3D G3DSA:3.40.50.300 288 372 4.2E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 SUPERFAMILY SSF116878 375 449 2.75E-43 T 25-04-2016 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 SUPERFAMILY SSF116878 123 222 2.75E-43 T 25-04-2016 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 241 7.5E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 285 7.5E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Pfam PF12631 MnmE helical domain 125 446 5.6E-51 T 25-04-2016 IPR025867 MnmE, helical domain SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 122 2.3E-36 T 25-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 PANTHER PTHR11649 11 449 1.3E-146 T 25-04-2016 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 449 31.515 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 PANTHER PTHR11649:SF56 11 449 1.3E-146 T 25-04-2016 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Gene3D G3DSA:3.40.50.300 222 249 2.7E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 SUPERFAMILY SSF52540 75 151 2.23E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 SUPERFAMILY SSF52540 187 365 2.23E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Pfam PF01926 50S ribosome-binding GTPase 221 312 1.7E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Gene3D G3DSA:1.20.120.430 380 449 1.6E-51 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Gene3D G3DSA:1.20.120.430 124 184 1.6E-51 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 Gene3D G3DSA:1.20.120.430 250 273 1.6E-51 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMD_RS21955 c9b5a18c08d8ad395d35ccd98b07d48c 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 311 7.3E-19 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS15850 67c45bb73b3e4946e5f93f8478d14db6 1285 Pfam PF13116 Protein of unknown function 506 780 1.2E-40 T 25-04-2016 IPR025263 Domain of unknown function DUF3971 SMD_RS15850 67c45bb73b3e4946e5f93f8478d14db6 1285 Pfam PF13502 AsmA-like C-terminal region 1009 1251 1.2E-59 T 25-04-2016 IPR032712 AsmA-like, C-terminal SMD_RS15850 67c45bb73b3e4946e5f93f8478d14db6 1285 PANTHER PTHR38690 4 1271 6.9E-299 T 25-04-2016 SMD_RS15850 67c45bb73b3e4946e5f93f8478d14db6 1285 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1259 0.0 T 25-04-2016 IPR011836 Conserved hypothetical protein CHP02099 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 17 457 2.1E-203 T 25-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 Gene3D G3DSA:3.40.50.300 202 458 4.4E-96 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 Pfam PF00437 Type II/IV secretion system protein 101 363 2.6E-78 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 Gene3D G3DSA:3.30.450.90 67 196 5.5E-50 T 25-04-2016 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 291 305 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 PANTHER PTHR30258 21 460 7.0E-203 T 25-04-2016 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 SMART SM00382 224 376 1.7E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 PANTHER PTHR30258:SF9 21 460 7.0E-203 T 25-04-2016 SMD_RS12610 be42ecef55dd27affa539bd998bfc251 460 SUPERFAMILY SSF52540 73 457 1.22E-97 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14235 26161df9426e8a235712d52608975965 149 SUPERFAMILY SSF55653 61 148 1.31E-22 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 PANTHER PTHR21368 1 149 7.0E-51 T 25-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14235 26161df9426e8a235712d52608975965 149 Gene3D G3DSA:3.10.430.100 62 148 2.6E-24 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 SUPERFAMILY SSF55658 1 57 1.38E-18 T 25-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 Gene3D G3DSA:3.40.5.10 1 52 1.1E-25 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 9.7E-23 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.5E-22 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMD_RS14235 26161df9426e8a235712d52608975965 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.406 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14235 26161df9426e8a235712d52608975965 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 3.7E-43 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 Pfam PF12840 Helix-turn-helix domain 10 70 3.8E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 SMART SM00418 11 90 1.7E-18 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 PANTHER PTHR38600 3 108 3.7E-19 T 25-04-2016 SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 Gene3D G3DSA:1.10.10.10 5 108 8.6E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 2.3E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 2.3E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 2.3E-7 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 SUPERFAMILY SSF46785 4 105 2.91E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09920 d6ac2854195d98531073aef45b03b212 110 PANTHER PTHR38600:SF1 3 108 3.7E-19 T 25-04-2016 SMD_RS10895 4d075b1a9956feac0f302fd7fabcb2f9 471 PANTHER PTHR30288 2 471 5.3E-60 T 25-04-2016 SMD_RS10895 4d075b1a9956feac0f302fd7fabcb2f9 471 Pfam PF07196 Flagellin hook IN motif 142 191 5.7E-6 T 25-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SMD_RS10895 4d075b1a9956feac0f302fd7fabcb2f9 471 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 230 457 8.9E-48 T 25-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SMD_RS10895 4d075b1a9956feac0f302fd7fabcb2f9 471 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 122 3.4E-20 T 25-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SMD_RS10895 4d075b1a9956feac0f302fd7fabcb2f9 471 PANTHER PTHR30288:SF0 2 471 5.3E-60 T 25-04-2016 SMD_RS16030 fee4bbd7c8de4a92e66f981b4bb3f5db 200 Gene3D G3DSA:1.10.3210.10 25 128 3.2E-5 T 25-04-2016 IPR006674 HD domain SMD_RS16030 fee4bbd7c8de4a92e66f981b4bb3f5db 200 PIRSF PIRSF035170 5 200 3.5E-59 T 25-04-2016 IPR009218 Predicted HD phosphohydrolase SMD_RS16030 fee4bbd7c8de4a92e66f981b4bb3f5db 200 PANTHER PTHR21174 1 198 1.4E-35 T 25-04-2016 IPR009218 Predicted HD phosphohydrolase SMD_RS16030 fee4bbd7c8de4a92e66f981b4bb3f5db 200 SUPERFAMILY SSF109604 12 186 6.8E-18 T 25-04-2016 SMD_RS02645 8cc10595b6fee0933a9c8a3018c86e56 155 PANTHER PTHR10173:SF18 15 134 8.7E-48 T 25-04-2016 SMD_RS02645 8cc10595b6fee0933a9c8a3018c86e56 155 Gene3D G3DSA:2.170.150.20 9 136 1.3E-53 T 25-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMD_RS02645 8cc10595b6fee0933a9c8a3018c86e56 155 SUPERFAMILY SSF51316 14 138 3.14E-52 T 25-04-2016 IPR011057 Mss4-like SMD_RS02645 8cc10595b6fee0933a9c8a3018c86e56 155 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 15 136 6.0E-44 T 25-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMD_RS02645 8cc10595b6fee0933a9c8a3018c86e56 155 Pfam PF01641 SelR domain 20 134 1.1E-47 T 25-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMD_RS02645 8cc10595b6fee0933a9c8a3018c86e56 155 PANTHER PTHR10173 15 134 8.7E-48 T 25-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 PANTHER PTHR26402:SF151 14 213 1.9E-30 T 25-04-2016 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 SUPERFAMILY SSF46894 155 220 2.65E-14 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 Gene3D G3DSA:3.40.50.2300 14 136 2.0E-19 T 25-04-2016 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 PANTHER PTHR26402 14 213 1.9E-30 T 25-04-2016 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 SMART SM00448 14 131 5.4E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 SUPERFAMILY SSF52172 13 150 1.38E-18 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 166 218 4.8E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 Gene3D G3DSA:1.10.10.10 137 220 8.4E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 181 6.5E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 209 6.5E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 197 6.5E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 SMART SM00421 164 221 7.8E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01775 3c1a7f1df36dd6e96663eb3ff8109b25 227 Pfam PF00072 Response regulator receiver domain 18 131 8.3E-14 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 5.7E-57 T 25-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 Gene3D G3DSA:3.10.50.30 81 156 4.5E-28 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 32.94 T 25-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 PANTHER PTHR30437 4 156 1.9E-63 T 25-04-2016 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 SUPERFAMILY SSF54534 82 156 4.05E-21 T 25-04-2016 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 SUPERFAMILY SSF46557 4 77 2.35E-29 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 1.6E-25 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 Gene3D G3DSA:1.10.287.180 3 74 2.1E-34 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 5.0E-32 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMD_RS10535 ce611760b506d137c3e59189d565516d 158 PIRSF PIRSF006092 2 157 3.3E-49 T 25-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SMD_RS18735 5540fdbc19c840328f55eb5723a028d7 339 Pfam PF02685 Glucokinase 20 334 1.8E-97 T 25-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMD_RS18735 5540fdbc19c840328f55eb5723a028d7 339 PANTHER PTHR30514:SF0 13 339 7.2E-51 T 25-04-2016 SMD_RS18735 5540fdbc19c840328f55eb5723a028d7 339 Gene3D G3DSA:3.40.367.20 119 318 7.9E-65 T 25-04-2016 SMD_RS18735 5540fdbc19c840328f55eb5723a028d7 339 SUPERFAMILY SSF53067 19 335 9.44E-51 T 25-04-2016 SMD_RS18735 5540fdbc19c840328f55eb5723a028d7 339 PANTHER PTHR30514 13 339 7.2E-51 T 25-04-2016 SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 Pfam PF03466 LysR substrate binding domain 89 290 5.5E-50 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 PANTHER PTHR30537 1 291 1.0E-123 T 25-04-2016 SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 PANTHER PTHR30537:SF5 1 291 1.0E-123 T 25-04-2016 SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 Gene3D G3DSA:3.40.190.10 175 260 1.1E-27 T 25-04-2016 SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 Gene3D G3DSA:1.10.10.10 3 85 3.0E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 SUPERFAMILY SSF46785 4 83 3.24E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 Gene3D G3DSA:3.40.190.10 90 174 7.1E-8 T 25-04-2016 SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS02595 24fdfe3a1f954f3e96ce09127d77cc26 293 SUPERFAMILY SSF53850 89 291 8.51E-51 T 25-04-2016 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 400 6.6E-141 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 Gene3D G3DSA:3.40.47.10 149 189 9.0E-66 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 Gene3D G3DSA:3.40.47.10 286 400 9.0E-66 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 SUPERFAMILY SSF53901 280 400 3.94E-43 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 Pfam PF02803 Thiolase, C-terminal domain 279 400 3.8E-45 T 25-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 PIRSF PIRSF000429 2 402 3.4E-127 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 PANTHER PTHR18919:SF69 3 402 3.9E-181 T 25-04-2016 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 SUPERFAMILY SSF53901 4 276 4.26E-74 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 Gene3D G3DSA:3.40.47.10 190 285 7.1E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 Gene3D G3DSA:3.40.47.10 7 130 7.1E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 PANTHER PTHR18919 3 402 3.9E-181 T 25-04-2016 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 25-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 25-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 25-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SMD_RS09745 29ad959fb164e4aaf7e55b90c8a18668 402 Pfam PF00108 Thiolase, N-terminal domain 9 272 5.4E-74 T 25-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SMD_RS21275 5836b37e3f8e589073887111eb17f15c 143 SUPERFAMILY SSF54637 15 138 2.14E-32 T 25-04-2016 IPR029069 HotDog domain SMD_RS21275 5836b37e3f8e589073887111eb17f15c 143 Gene3D G3DSA:3.10.129.10 15 134 6.2E-35 T 25-04-2016 IPR029069 HotDog domain SMD_RS21275 5836b37e3f8e589073887111eb17f15c 143 Pfam PF13279 Thioesterase-like superfamily 20 124 1.1E-11 T 25-04-2016 SMD_RS21275 5836b37e3f8e589073887111eb17f15c 143 PANTHER PTHR31793:SF9 19 138 1.5E-31 T 25-04-2016 SMD_RS21275 5836b37e3f8e589073887111eb17f15c 143 PANTHER PTHR31793 19 138 1.5E-31 T 25-04-2016 SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 ProSitePatterns PS00018 EF-hand calcium-binding domain. 56 68 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 Pfam PF13202 EF hand 51 68 4.4E-5 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 Pfam PF13202 EF hand 27 44 0.0027 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 Pfam PF13202 EF hand 89 106 0.0032 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 ProSitePatterns PS00018 EF-hand calcium-binding domain. 32 44 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 Gene3D G3DSA:1.10.238.10 60 106 2.5E-8 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 ProSitePatterns PS00018 EF-hand calcium-binding domain. 93 105 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 Gene3D G3DSA:1.10.238.10 27 59 4.2E-7 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS00320 05243caccb6bd0acbcf22c6f2f9451c0 110 SUPERFAMILY SSF47473 27 106 7.89E-14 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS03515 b74200c8a96b25726b6464a4c41a7dbc 194 Pfam PF13511 Domain of unknown function (DUF4124) 22 61 9.0E-6 T 25-04-2016 IPR025392 Domain of unknown function DUF4124 SMD_RS07035 51ba60f504ef010551d6c36a61729b6d 345 Pfam PF05229 Spore Coat Protein U domain 204 342 5.1E-30 T 25-04-2016 IPR007893 Spore coat protein U SMD_RS07035 51ba60f504ef010551d6c36a61729b6d 345 Pfam PF05229 Spore Coat Protein U domain 20 165 3.7E-16 T 25-04-2016 IPR007893 Spore coat protein U SMD_RS07035 51ba60f504ef010551d6c36a61729b6d 345 PANTHER PTHR37089:SF5 1 345 2.0E-73 T 25-04-2016 SMD_RS07035 51ba60f504ef010551d6c36a61729b6d 345 PANTHER PTHR37089 1 345 2.0E-73 T 25-04-2016 SMD_RS07035 51ba60f504ef010551d6c36a61729b6d 345 SMART SM00972 283 342 3.3E-22 T 25-04-2016 IPR007893 Spore coat protein U SMD_RS07035 51ba60f504ef010551d6c36a61729b6d 345 SMART SM00972 99 168 0.013 T 25-04-2016 IPR007893 Spore coat protein U SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 Gene3D G3DSA:3.40.50.720 18 253 2.4E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PANTHER PTHR24322:SF503 173 204 3.0E-47 T 25-04-2016 SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PANTHER PTHR24322:SF503 26 157 3.0E-47 T 25-04-2016 SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 1.7E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 1.7E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 1.7E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PANTHER PTHR24322 173 204 3.0E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 PANTHER PTHR24322 26 157 3.0E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 SUPERFAMILY SSF51735 18 254 2.41E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS07555 8e082de7d6ab566a1f0c574bb6d830b2 258 Pfam PF00106 short chain dehydrogenase 23 214 1.2E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS17275 9100baca1d88261337d2912faa644410 304 Pfam PF13354 Beta-lactamase enzyme family 67 274 2.8E-42 T 25-04-2016 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PANTHER PTHR35333 47 296 1.3E-73 T 25-04-2016 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 156 180 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 78 95 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 218 233 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 120 145 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 182 207 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 46 70 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 PRINTS PR00118 Beta-lactamase class A signature 235 250 3.9E-57 T 25-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 ProSitePatterns PS00146 Beta-lactamase class-A active site. 80 95 - T 25-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 SMD_RS17275 9100baca1d88261337d2912faa644410 304 Gene3D G3DSA:3.40.710.10 46 299 3.6E-91 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS17275 9100baca1d88261337d2912faa644410 304 PANTHER PTHR35333:SF2 47 296 1.3E-73 T 25-04-2016 SMD_RS17275 9100baca1d88261337d2912faa644410 304 SUPERFAMILY SSF56601 46 297 3.05E-70 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS05820 60b16e2c698088d58b98a11ccc71a507 130 Gene3D G3DSA:1.25.40.10 11 90 3.8E-4 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS05820 60b16e2c698088d58b98a11ccc71a507 130 SUPERFAMILY SSF48452 10 86 3.52E-5 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 Gene3D G3DSA:1.10.760.10 193 287 6.5E-13 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 194 281 4.1E-7 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 PANTHER PTHR35008:SF4 72 296 2.3E-35 T 25-04-2016 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 PANTHER PTHR35008 72 296 2.3E-35 T 25-04-2016 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 Gene3D G3DSA:1.10.760.10 70 174 1.4E-20 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 SUPERFAMILY SSF46626 183 291 1.18E-17 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08950 50cb51f86cff26bc3d37ff68318ebf57 308 SUPERFAMILY SSF46626 83 174 4.33E-21 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 662 1129 3.1E-45 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 25-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 443 453 - T 25-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795 191 239 2.0E-36 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795 261 296 2.0E-36 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795 98 144 2.0E-36 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795 360 502 2.0E-36 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795 313 340 2.0E-36 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PRINTS PR00723 Subtilisin serine protease family (S8) signature 442 458 2.6E-14 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 2.6E-14 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PRINTS PR00723 Subtilisin serine protease family (S8) signature 122 141 2.6E-14 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 SMART SM00869 853 1119 2.5E-41 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 SUPERFAMILY SSF103515 814 1129 1.57E-55 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 Pfam PF00082 Subtilase family 122 493 1.6E-37 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 Gene3D G3DSA:2.40.128.130 808 1129 3.0E-50 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795:SF419 191 239 2.0E-36 T 25-04-2016 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795:SF419 261 296 2.0E-36 T 25-04-2016 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795:SF419 98 144 2.0E-36 T 25-04-2016 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795:SF419 360 502 2.0E-36 T 25-04-2016 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 PANTHER PTHR10795:SF419 313 340 2.0E-36 T 25-04-2016 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 Gene3D G3DSA:3.40.50.200 98 143 1.9E-61 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 Gene3D G3DSA:3.40.50.200 179 502 1.9E-61 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 SUPERFAMILY SSF52743 202 503 6.81E-58 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 SUPERFAMILY SSF52743 103 161 6.81E-58 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 SUPERFAMILY SSF51126 405 740 3.45E-11 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS18465 3bf70df82a9b1c5d72ddc2b6e656655b 1129 Pfam PF03797 Autotransporter beta-domain 851 1113 4.8E-42 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 SUPERFAMILY SSF46946 2 114 1.16E-43 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 PIRSF PIRSF002134 1 118 1.3E-41 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 25-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 9.4E-51 T 25-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 6.7E-30 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 PANTHER PTHR10871 1 118 3.6E-62 T 25-04-2016 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 Gene3D G3DSA:1.10.8.50 1 71 3.8E-27 T 25-04-2016 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.527 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04275 efad6bda9b44b84e9cbf49356964d871 118 Gene3D G3DSA:4.10.910.10 76 118 8.1E-25 T 25-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SMD_RS13015 87309d7aa6504522c7663125012d709a 156 SMART SM00529 55 154 2.2E-33 T 25-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 SMD_RS13015 87309d7aa6504522c7663125012d709a 156 PANTHER PTHR33238 34 152 1.4E-25 T 25-04-2016 SMD_RS13015 87309d7aa6504522c7663125012d709a 156 SUPERFAMILY SSF46785 47 121 1.22E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13015 87309d7aa6504522c7663125012d709a 156 PANTHER PTHR33238:SF1 34 152 1.4E-25 T 25-04-2016 SMD_RS13015 87309d7aa6504522c7663125012d709a 156 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 94 149 2.1E-12 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SMD_RS13015 87309d7aa6504522c7663125012d709a 156 Gene3D G3DSA:1.10.60.10 106 150 8.1E-19 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SMD_RS13015 87309d7aa6504522c7663125012d709a 156 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 35 91 2.8E-13 T 25-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 SMD_RS13015 87309d7aa6504522c7663125012d709a 156 Gene3D G3DSA:1.10.10.10 35 101 2.2E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18480 e01501cddd99bf8c30066684e6882cb8 210 Gene3D G3DSA:3.40.30.10 2 185 2.5E-44 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18480 e01501cddd99bf8c30066684e6882cb8 210 PANTHER PTHR13887 7 187 5.0E-25 T 25-04-2016 SMD_RS18480 e01501cddd99bf8c30066684e6882cb8 210 SUPERFAMILY SSF52833 3 187 5.42E-33 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS18480 e01501cddd99bf8c30066684e6882cb8 210 PIRSF PIRSF006386 1 195 3.9E-39 T 25-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa SMD_RS18480 e01501cddd99bf8c30066684e6882cb8 210 Pfam PF01323 DSBA-like thioredoxin domain 4 184 2.3E-34 T 25-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 Pfam PF04397 LytTr DNA-binding domain 146 241 6.3E-21 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 SUPERFAMILY SSF52172 3 119 3.98E-29 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 SMART SM00850 145 242 2.7E-27 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 SMART SM00448 5 113 6.7E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 Gene3D G3DSA:2.40.50.40 137 204 2.2E-12 T 25-04-2016 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 Gene3D G3DSA:2.20.25.10 209 243 1.8E-7 T 25-04-2016 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 Gene3D G3DSA:3.40.50.2300 3 118 7.1E-28 T 25-04-2016 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 PANTHER PTHR26402 5 118 3.0E-29 T 25-04-2016 SMD_RS03535 65531bd58db91fe99ba9370b313866e0 243 Pfam PF00072 Response regulator receiver domain 7 113 1.3E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01305 50f6ebfa53b50f2676ddecbe2b2d84fc 363 SUPERFAMILY SSF51395 1 354 1.22E-110 T 25-04-2016 SMD_RS01305 50f6ebfa53b50f2676ddecbe2b2d84fc 363 PANTHER PTHR22893 1 350 2.5E-143 T 25-04-2016 SMD_RS01305 50f6ebfa53b50f2676ddecbe2b2d84fc 363 Gene3D G3DSA:3.20.20.70 1 352 1.1E-120 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS01305 50f6ebfa53b50f2676ddecbe2b2d84fc 363 PANTHER PTHR22893:SF7 1 350 2.5E-143 T 25-04-2016 SMD_RS01305 50f6ebfa53b50f2676ddecbe2b2d84fc 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 336 3.0E-62 T 25-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMD_RS16145 53385ba8ba19872cd4251046f5771cc1 332 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 7 331 3.7E-141 T 25-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated SMD_RS16145 53385ba8ba19872cd4251046f5771cc1 332 Gene3D G3DSA:3.60.15.10 33 188 2.8E-12 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS16145 53385ba8ba19872cd4251046f5771cc1 332 PANTHER PTHR11203:SF35 12 211 4.8E-85 T 25-04-2016 SMD_RS16145 53385ba8ba19872cd4251046f5771cc1 332 SUPERFAMILY SSF56281 13 320 8.13E-56 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS16145 53385ba8ba19872cd4251046f5771cc1 332 PANTHER PTHR11203 12 211 4.8E-85 T 25-04-2016 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 PIRSF PIRSF006337 5 554 6.7E-190 T 25-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 PANTHER PTHR10357 7 445 2.2E-97 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 PANTHER PTHR10357 479 537 2.2E-97 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 SUPERFAMILY SSF51445 97 497 6.61E-93 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 PANTHER PTHR10357:SF110 7 445 2.2E-97 T 25-04-2016 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 PANTHER PTHR10357:SF110 479 537 2.2E-97 T 25-04-2016 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 Gene3D G3DSA:2.60.40.10 12 90 9.4E-23 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 18 540 1.5E-186 T 25-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 Gene3D G3DSA:3.20.20.80 458 497 3.4E-73 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 Gene3D G3DSA:3.20.20.80 104 420 3.4E-73 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 SMART SM00642 112 456 6.9E-9 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 SUPERFAMILY SSF81296 7 89 7.6E-19 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 Pfam PF00128 Alpha amylase, catalytic domain 123 206 7.3E-10 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12695 4aeccc24f6f88698d89fa70636099a14 572 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 8 67 5.5E-5 T 25-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SMD_RS05390 626c52dfab58d9558d1a1bc33ff177d0 163 Pfam PF01797 Transposase IS200 like 16 117 2.8E-10 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS05390 626c52dfab58d9558d1a1bc33ff177d0 163 Gene3D G3DSA:3.30.70.1290 5 128 4.2E-14 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS05390 626c52dfab58d9558d1a1bc33ff177d0 163 PANTHER PTHR36966 1 157 2.3E-21 T 25-04-2016 SMD_RS05390 626c52dfab58d9558d1a1bc33ff177d0 163 SUPERFAMILY SSF143422 9 133 4.97E-25 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS05390 626c52dfab58d9558d1a1bc33ff177d0 163 PANTHER PTHR36966:SF1 1 157 2.3E-21 T 25-04-2016 SMD_RS05390 626c52dfab58d9558d1a1bc33ff177d0 163 SMART SM01321 13 127 1.2E-26 T 25-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 Pfam PF03968 OstA-like protein 113 229 3.7E-4 T 25-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 Pfam PF04453 Organic solvent tolerance protein 335 763 2.2E-92 T 25-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 Gene3D G3DSA:2.60.450.10 92 241 8.3E-11 T 25-04-2016 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 PANTHER PTHR30189 11 452 1.7E-91 T 25-04-2016 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 PANTHER PTHR30189 544 866 1.7E-91 T 25-04-2016 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 PANTHER PTHR30189 475 520 1.7E-91 T 25-04-2016 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 SUPERFAMILY SSF56935 646 776 1.67E-7 T 25-04-2016 SMD_RS03765 4f442daf9dfccd07929b301d8da7263f 866 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 32 824 19.806 T 25-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SMD_RS00280 15682db4773e71c08a46b8ae92a9a421 330 PANTHER PTHR14226 44 299 4.5E-89 T 25-04-2016 SMD_RS00280 15682db4773e71c08a46b8ae92a9a421 330 Gene3D G3DSA:3.40.1090.10 39 204 1.8E-12 T 25-04-2016 SMD_RS00280 15682db4773e71c08a46b8ae92a9a421 330 SUPERFAMILY SSF52151 36 294 4.71E-57 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS00280 15682db4773e71c08a46b8ae92a9a421 330 PANTHER PTHR14226:SF24 44 299 4.5E-89 T 25-04-2016 SMD_RS00280 15682db4773e71c08a46b8ae92a9a421 330 Pfam PF01734 Patatin-like phospholipase 48 204 2.1E-28 T 25-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 Pfam PF00107 Zinc-binding dehydrogenase 164 283 2.2E-8 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 PANTHER PTHR11695 21 331 6.4E-105 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 SUPERFAMILY SSF50129 8 149 2.89E-37 T 25-04-2016 IPR011032 GroES-like SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 PANTHER PTHR11695:SF13 21 331 6.4E-105 T 25-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 9 330 6.4E-117 T 25-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 Gene3D G3DSA:3.90.180.10 28 136 5.0E-9 T 25-04-2016 IPR011032 GroES-like SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 SMART SM00829 21 328 9.1E-5 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 Gene3D G3DSA:3.40.50.720 137 297 2.7E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16430 79dc539d908ce0aa1f6f17000cda6dbd 331 SUPERFAMILY SSF51735 122 294 1.18E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 PANTHER PTHR30204 1 132 5.7E-25 T 25-04-2016 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.6E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 5.6E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 5.6E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 SMART SM00422 4 72 9.4E-11 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 Gene3D G3DSA:1.10.1660.10 57 127 1.1E-7 T 25-04-2016 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 Gene3D G3DSA:1.10.1660.10 4 56 1.8E-18 T 25-04-2016 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 PANTHER PTHR30204:SF17 1 132 5.7E-25 T 25-04-2016 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 Pfam PF13411 MerR HTH family regulatory protein 6 66 3.3E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13100 9929377ebcc135a958c80eccfde0829c 135 SUPERFAMILY SSF46955 5 125 1.53E-23 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 PANTHER PTHR30204 1 128 6.2E-32 T 25-04-2016 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 Gene3D G3DSA:1.10.1660.10 57 129 6.5E-25 T 25-04-2016 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 PANTHER PTHR30204:SF16 1 128 6.2E-32 T 25-04-2016 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 Pfam PF13411 MerR HTH family regulatory protein 1 68 4.0E-18 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.3E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.3E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.3E-8 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 SUPERFAMILY SSF46955 1 126 6.59E-35 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 Gene3D G3DSA:1.10.1660.10 1 56 4.6E-24 T 25-04-2016 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS11250 32c07226e2a9713fd94247d9ab40ccf1 146 SMART SM00422 1 70 1.1E-26 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Gene3D G3DSA:3.30.70.1430 40 140 1.3E-28 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82714 182 264 2.22E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Gene3D G3DSA:3.30.2090.10 181 267 2.6E-21 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1012 2.1E-294 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82866 795 1016 3.4E-49 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82693 556 654 5.75E-13 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 5.2E-75 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Gene3D G3DSA:1.20.1640.10 286 493 2.3E-56 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82714 709 793 1.44E-19 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Gene3D G3DSA:1.10.3850.10 801 1013 5.5E-63 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82693 136 181 4.6E-21 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82693 268 324 4.6E-21 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82866 291 490 2.22E-44 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Gene3D G3DSA:3.30.2090.10 709 793 1.4E-21 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 Gene3D G3DSA:3.30.70.1430 558 652 1.8E-7 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PANTHER PTHR32063:SF14 1 1037 0.0 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 SUPERFAMILY SSF82693 40 133 3.49E-24 T 25-04-2016 SMD_RS17610 795b86a7d1f18136567ba0c44ba15a74 1041 PANTHER PTHR32063 1 1037 0.0 T 25-04-2016 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 1.6E-26 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.6E-26 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 1.6E-26 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.6E-26 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 1.6E-26 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.6E-26 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PANTHER PTHR11958 9 437 2.6E-249 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 25-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 Pfam PF00375 Sodium:dicarboxylate symporter family 20 412 7.3E-108 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 25-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 PANTHER PTHR11958:SF49 9 437 2.6E-249 T 25-04-2016 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 Gene3D G3DSA:1.10.3860.10 18 417 9.6E-116 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 438 37.857 T 25-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 SMD_RS18365 649b5c0a508aa4131f5c090b6b67f856 447 SUPERFAMILY SSF118215 20 413 1.57E-116 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06235 53d5e5ad25c45a84e7e0374a7bbb55d5 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.6E-36 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMD_RS06235 53d5e5ad25c45a84e7e0374a7bbb55d5 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 2.8E-33 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06235 53d5e5ad25c45a84e7e0374a7bbb55d5 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 25-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06235 53d5e5ad25c45a84e7e0374a7bbb55d5 102 PANTHER PTHR21349 1 102 3.2E-38 T 25-04-2016 SMD_RS06235 53d5e5ad25c45a84e7e0374a7bbb55d5 102 SUPERFAMILY SSF141091 1 100 1.96E-33 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMD_RS06235 53d5e5ad25c45a84e7e0374a7bbb55d5 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 25.112 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PANTHER PTHR24423 3 9 3.6E-63 T 25-04-2016 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PANTHER PTHR24423 178 436 3.6E-63 T 25-04-2016 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 294 2.3E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 Gene3D G3DSA:3.30.565.10 301 438 8.7E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 SMART SM00387 337 439 1.4E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 Gene3D G3DSA:1.10.287.130 230 291 3.0E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 SUPERFAMILY SSF55874 285 437 2.62E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 3.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 3.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.0E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 SUPERFAMILY SSF47384 221 295 6.87E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PANTHER PTHR24423:SF399 3 9 3.6E-63 T 25-04-2016 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 PANTHER PTHR24423:SF399 178 436 3.6E-63 T 25-04-2016 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 SMART SM00388 238 295 4.0E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13890 bc5ca773c72a30925a7a2eb1bf4a8c7b 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 437 2.6E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 PANTHER PTHR11995 6 184 7.7E-124 T 25-04-2016 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 SUPERFAMILY SSF56770 35 179 4.97E-66 T 25-04-2016 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 Gene3D G3DSA:3.40.50.700 47 175 3.5E-32 T 25-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 25-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 177 1.7E-76 T 25-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.309 T 25-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 4.1E-23 T 25-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMD_RS15475 8860ca72117fdc605e57a302b9351014 184 PANTHER PTHR11995:SF22 6 184 7.7E-124 T 25-04-2016 SMD_RS12210 3e64c9089f619c0be5aee89af0668d69 166 Pfam PF04449 CS1 type fimbrial major subunit 32 160 1.7E-7 T 25-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 SMD_RS10310 d0429e24bc8d4458408e6d61ec383910 340 Pfam PF02685 Glucokinase 24 333 5.0E-83 T 25-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMD_RS10310 d0429e24bc8d4458408e6d61ec383910 340 SUPERFAMILY SSF53067 22 333 2.87E-47 T 25-04-2016 SMD_RS10310 d0429e24bc8d4458408e6d61ec383910 340 PANTHER PTHR30514:SF0 16 337 4.3E-49 T 25-04-2016 SMD_RS10310 d0429e24bc8d4458408e6d61ec383910 340 Gene3D G3DSA:3.40.367.20 120 316 2.0E-53 T 25-04-2016 SMD_RS10310 d0429e24bc8d4458408e6d61ec383910 340 PANTHER PTHR30514 16 337 4.3E-49 T 25-04-2016 SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 189 1.2E-46 T 25-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 Gene3D G3DSA:2.70.40.10 3 189 6.1E-66 T 25-04-2016 IPR029054 dUTPase-like SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 SUPERFAMILY SSF51283 3 189 3.79E-51 T 25-04-2016 IPR029054 dUTPase-like SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 PANTHER PTHR11241:SF1 1 189 6.3E-76 T 25-04-2016 SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 27.784 T 25-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 PANTHER PTHR11241 1 189 6.3E-76 T 25-04-2016 SMD_RS15715 0c396a3bcde68daf9817291adb6a5614 190 Pfam PF00692 dUTPase 79 185 3.2E-7 T 25-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SMD_RS13055 cf08415c05e631c0190663b795178619 659 PANTHER PTHR30047:SF6 15 659 0.0 T 25-04-2016 SMD_RS13055 cf08415c05e631c0190663b795178619 659 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 504 2.1E-176 T 25-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SMD_RS13055 cf08415c05e631c0190663b795178619 659 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 504 2.3E-154 T 25-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SMD_RS13055 cf08415c05e631c0190663b795178619 659 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 25-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 SMD_RS13055 cf08415c05e631c0190663b795178619 659 PANTHER PTHR30047 15 659 0.0 T 25-04-2016 SMD_RS05530 64f41156587c2db01b1108ad5c5e36e5 389 PANTHER PTHR21716 5 366 7.1E-65 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMD_RS05530 64f41156587c2db01b1108ad5c5e36e5 389 Pfam PF01594 Domain of unknown function DUF20 19 348 1.7E-57 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 441 6.6E-164 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Gene3D G3DSA:1.10.1750.10 342 442 2.2E-40 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 141 161 1.3E-46 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 401 420 1.3E-46 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 266 1.3E-46 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 173 187 1.3E-46 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 205 219 1.3E-46 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 SUPERFAMILY SSF52540 108 319 1.44E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 ProSitePatterns PS01008 DnaA protein signature. 401 420 - T 25-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Pfam PF11638 DnaA N-terminal domain 1 62 7.1E-13 T 25-04-2016 IPR024633 DnaA N-terminal domain SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PANTHER PTHR30050:SF2 1 443 1.4E-209 T 25-04-2016 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 PANTHER PTHR30050 1 443 1.4E-209 T 25-04-2016 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 SMART SM00382 140 271 2.2E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 354 420 1.3E-29 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Gene3D G3DSA:1.10.8.60 274 341 1.3E-26 T 25-04-2016 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Pfam PF00308 Bacterial dnaA protein 107 325 2.4E-85 T 25-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Gene3D G3DSA:3.40.50.300 97 272 9.8E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 SUPERFAMILY SSF48295 340 442 9.94E-36 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 442 32.03 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMD_RS00115 c42a923c3861d3c932db52faa3f3a14f 443 SMART SM00760 351 420 1.5E-39 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMD_RS07850 6d711afe8b5da0ae8c0156908a7cc85b 176 Pfam PF13527 Acetyltransferase (GNAT) domain 9 137 1.4E-13 T 25-04-2016 SMD_RS07850 6d711afe8b5da0ae8c0156908a7cc85b 176 SUPERFAMILY SSF55729 7 155 8.23E-29 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS07850 6d711afe8b5da0ae8c0156908a7cc85b 176 PANTHER PTHR23091 6 157 1.4E-30 T 25-04-2016 SMD_RS07850 6d711afe8b5da0ae8c0156908a7cc85b 176 PANTHER PTHR23091:SF237 6 157 1.4E-30 T 25-04-2016 SMD_RS07850 6d711afe8b5da0ae8c0156908a7cc85b 176 Gene3D G3DSA:3.40.630.30 7 140 1.4E-21 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10750 540a0b0fadca7b40415b287428019d00 130 SMART SM00448 5 119 1.1E-34 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10750 540a0b0fadca7b40415b287428019d00 130 Pfam PF00072 Response regulator receiver domain 7 119 8.4E-31 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10750 540a0b0fadca7b40415b287428019d00 130 SUPERFAMILY SSF52172 3 126 5.83E-38 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10750 540a0b0fadca7b40415b287428019d00 130 PANTHER PTHR26402 5 125 2.4E-42 T 25-04-2016 SMD_RS10750 540a0b0fadca7b40415b287428019d00 130 Gene3D G3DSA:3.40.50.2300 3 125 2.0E-39 T 25-04-2016 SMD_RS12955 fae9ced0b62b5802c518bf5f8844285a 103 PANTHER PTHR40077 1 103 8.9E-20 T 25-04-2016 SMD_RS12955 fae9ced0b62b5802c518bf5f8844285a 103 Pfam PF12823 Domain of unknown function (DUF3817) 7 93 1.1E-20 T 25-04-2016 IPR023845 Domain of unknown function DUF3817, transmembrane SMD_RS12955 fae9ced0b62b5802c518bf5f8844285a 103 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 1.2E-20 T 25-04-2016 IPR023845 Domain of unknown function DUF3817, transmembrane SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Gene3D G3DSA:1.10.8.60 313 386 1.8E-23 T 25-04-2016 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 25-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 25-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 25-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 SUPERFAMILY SSF52172 6 183 2.56E-42 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 PANTHER PTHR32071:SF28 7 457 3.1E-273 T 25-04-2016 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 2.2E-10 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 2.2E-10 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Gene3D G3DSA:3.40.50.300 138 312 9.3E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 PANTHER PTHR32071 7 457 3.1E-273 T 25-04-2016 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Pfam PF00158 Sigma-54 interaction domain 141 306 3.6E-65 T 25-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Gene3D G3DSA:3.40.50.2300 7 136 5.6E-34 T 25-04-2016 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 SUPERFAMILY SSF52540 141 382 9.01E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 SMART SM00448 5 116 1.1E-33 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Gene3D G3DSA:1.10.10.60 402 457 5.0E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Pfam PF02954 Bacterial regulatory protein, Fis family 414 454 2.9E-14 T 25-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 SMART SM00382 160 303 1.4E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 SUPERFAMILY SSF46689 354 456 2.24E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS17440 55c1faf2d69d8503248086bebb51b7b0 457 Pfam PF00072 Response regulator receiver domain 8 115 8.3E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS15755 904cef9780cc93f53dea4a218ef65646 527 Gene3D G3DSA:3.50.50.60 218 314 4.1E-36 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15755 904cef9780cc93f53dea4a218ef65646 527 Gene3D G3DSA:3.50.50.60 2 79 4.1E-36 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15755 904cef9780cc93f53dea4a218ef65646 527 Pfam PF01593 Flavin containing amine oxidoreductase 14 328 2.3E-15 T 25-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SMD_RS15755 904cef9780cc93f53dea4a218ef65646 527 PANTHER PTHR10668:SF83 3 527 3.0E-198 T 25-04-2016 SMD_RS15755 904cef9780cc93f53dea4a218ef65646 527 SUPERFAMILY SSF51905 1 408 6.83E-51 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15755 904cef9780cc93f53dea4a218ef65646 527 PANTHER PTHR10668 3 527 3.0E-198 T 25-04-2016 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PANTHER PTHR11670:SF38 1 466 3.2E-219 T 25-04-2016 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 Gene3D G3DSA:3.30.499.10 327 467 1.1E-54 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PANTHER PTHR11670 1 466 3.2E-219 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 Pfam PF00330 Aconitase family (aconitate hydratase) 10 458 5.3E-138 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 Gene3D G3DSA:3.40.1060.10 175 289 9.1E-37 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 116 124 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 127 140 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 217 230 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 344 355 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 90 103 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 141 156 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 294 308 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 400 413 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 PRINTS PR00415 Aconitase family signature 203 216 1.8E-43 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 SUPERFAMILY SSF53732 4 466 1.12E-152 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 Gene3D G3DSA:3.30.499.10 6 164 4.5E-20 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 466 3.4E-194 T 25-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS18270 aaf2a1b15c3687381d2f30d3759ad9e2 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 4 467 52.841 T 25-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMD_RS09635 5017733728cf26e8081079b80dd297fc 359 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 22 354 1.3E-110 T 25-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 SMD_RS09635 5017733728cf26e8081079b80dd297fc 359 PANTHER PTHR30106 11 359 6.9E-130 T 25-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SMD_RS09635 5017733728cf26e8081079b80dd297fc 359 PANTHER PTHR30106:SF2 11 359 6.9E-130 T 25-04-2016 SMD_RS09635 5017733728cf26e8081079b80dd297fc 359 Pfam PF03601 Conserved hypothetical protein 698 23 336 2.2E-104 T 25-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 Gene3D G3DSA:3.40.640.10 144 353 5.6E-57 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 SMART SM00345 17 76 8.9E-9 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 PANTHER PTHR11751:SF314 94 476 9.8E-99 T 25-04-2016 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 Gene3D G3DSA:3.90.1150.10 354 470 8.5E-12 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 5.2E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 SUPERFAMILY SSF46785 12 79 1.53E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 Pfam PF00155 Aminotransferase class I and II 143 461 2.8E-28 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 PANTHER PTHR11751 94 476 9.8E-99 T 25-04-2016 SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 Gene3D G3DSA:1.10.10.10 12 77 9.2E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02775 8f6884f53b1e11c9c784d13a07dd0cad 482 SUPERFAMILY SSF53383 97 477 6.88E-81 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 SMART SM00283 491 738 2.0E-91 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 Pfam PF00672 HAMP domain 194 262 3.0E-13 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 543 737 1.6E-60 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 PANTHER PTHR32089 106 247 4.6E-171 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 PANTHER PTHR32089 473 741 4.6E-171 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 Gene3D G3DSA:3.30.450.20 272 390 8.7E-7 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 186 2.8E-18 T 25-04-2016 IPR024478 4HB MCP domain SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 SUPERFAMILY SSF58104 458 738 9.68E-71 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 SUPERFAMILY SSF55785 259 386 5.9E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 SMART SM00304 438 490 18.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 SMART SM00304 213 265 1.7E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 PANTHER PTHR32089:SF63 106 247 4.6E-171 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 PANTHER PTHR32089:SF63 473 741 4.6E-171 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 Gene3D G3DSA:1.10.287.950 506 710 1.7E-61 T 25-04-2016 SMD_RS10680 b4a6337c11cd4cad05f65e6292cc28e1 791 SUPERFAMILY SSF158472 215 264 1.24E-7 T 25-04-2016 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 Pfam PF00717 Peptidase S24-like 126 191 2.3E-15 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 Hamap MF_00015 LexA repressor [lexA]. 2 210 30.777 T 25-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 TIGRFAM TIGR00498 lexA: repressor LexA 2 209 1.6E-55 T 25-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 PANTHER PTHR33516 1 211 5.0E-86 T 25-04-2016 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 PANTHER PTHR33516:SF2 1 211 5.0E-86 T 25-04-2016 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 6.7E-10 T 25-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 133 6.7E-10 T 25-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 134 145 6.7E-10 T 25-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 Pfam PF01726 LexA DNA binding domain 2 64 2.5E-19 T 25-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 SUPERFAMILY SSF46785 1 69 2.07E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 Gene3D G3DSA:2.10.109.10 87 208 2.4E-39 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 Gene3D G3DSA:1.10.10.10 2 68 1.5E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08875 4b6655913f161178ac6b19461dea7002 211 SUPERFAMILY SSF51306 86 208 3.84E-34 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 Gene3D G3DSA:3.30.1700.10 128 282 6.2E-58 T 25-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 SUPERFAMILY SSF54211 133 277 8.34E-50 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 SUPERFAMILY SSF54211 3 125 2.43E-42 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 290 4.7E-116 T 25-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 48.63 T 25-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 PANTHER PTHR33694:SF1 1 287 1.1E-128 T 25-04-2016 SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 PANTHER PTHR33694 1 287 1.1E-128 T 25-04-2016 SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.8E-104 T 25-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMD_RS03490 c8be2900fa526ef2ccf7d17dc8cf3083 303 Gene3D G3DSA:3.30.230.20 3 125 2.6E-45 T 25-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMD_RS13995 1021f7774a27885c0d0027eefd3fbfcb 190 Gene3D G3DSA:3.30.1150.10 71 188 3.1E-13 T 25-04-2016 SMD_RS13995 1021f7774a27885c0d0027eefd3fbfcb 190 PANTHER PTHR33446:SF2 64 186 1.3E-16 T 25-04-2016 SMD_RS13995 1021f7774a27885c0d0027eefd3fbfcb 190 SUPERFAMILY SSF74653 106 185 3.79E-20 T 25-04-2016 SMD_RS13995 1021f7774a27885c0d0027eefd3fbfcb 190 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 108 186 2.2E-21 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS13995 1021f7774a27885c0d0027eefd3fbfcb 190 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 109 187 2.6E-18 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS13995 1021f7774a27885c0d0027eefd3fbfcb 190 PANTHER PTHR33446 64 186 1.3E-16 T 25-04-2016 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.30.365.10 451 596 8.5E-25 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 PANTHER PTHR11908 1 734 0.0 T 25-04-2016 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 670 9.0E-118 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 SUPERFAMILY SSF54665 14 138 9.03E-32 T 25-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 38 139 1.7E-18 T 25-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.30.365.10 128 179 4.8E-8 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.30.365.10 286 308 4.8E-8 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 PANTHER PTHR11908:SF71 1 734 0.0 T 25-04-2016 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 SUPERFAMILY SSF56003 163 730 6.41E-156 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.30.365.10 180 278 2.1E-36 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.90.1170.50 15 127 5.5E-31 T 25-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 SMART SM01008 34 140 3.7E-27 T 25-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.30.365.10 597 727 1.1E-53 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS11495 40b7313ab1f41bf3723265686ab26040 734 Gene3D G3DSA:3.30.365.10 358 448 1.1E-53 T 25-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 PANTHER PTHR24220:SF560 31 271 3.7E-128 T 25-04-2016 SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 PANTHER PTHR24220 31 271 3.7E-128 T 25-04-2016 SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 Gene3D G3DSA:3.40.50.300 30 270 6.1E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 SUPERFAMILY SSF52540 30 263 3.06E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 SMART SM00382 54 256 9.4E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 Pfam PF00005 ABC transporter 45 201 9.1E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS07235 1b73276dd25227ce3388c7b6cfe9e756 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 3.6E-114 T 25-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 PANTHER PTHR32332 113 358 3.0E-108 T 25-04-2016 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 PANTHER PTHR32332 8 88 3.0E-108 T 25-04-2016 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 SUPERFAMILY SSF51412 14 333 2.59E-48 T 25-04-2016 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 Gene3D G3DSA:3.20.20.70 13 336 1.9E-50 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 Pfam PF03060 Nitronate monooxygenase 21 346 3.0E-59 T 25-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 PANTHER PTHR32332:SF12 113 358 3.0E-108 T 25-04-2016 SMD_RS06410 3db887b53bc9c1dab9873074371a0ff6 358 PANTHER PTHR32332:SF12 8 88 3.0E-108 T 25-04-2016 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 Pfam PF01904 Protein of unknown function DUF72 28 265 1.3E-51 T 25-04-2016 IPR002763 Protein of unknown function DUF72 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 Gene3D G3DSA:3.20.20.410 6 268 6.3E-66 T 25-04-2016 IPR002763 Protein of unknown function DUF72 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 PANTHER PTHR30348:SF7 241 272 7.0E-76 T 25-04-2016 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 PANTHER PTHR30348:SF7 2 224 7.0E-76 T 25-04-2016 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 PANTHER PTHR30348 241 272 7.0E-76 T 25-04-2016 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 PANTHER PTHR30348 2 224 7.0E-76 T 25-04-2016 SMD_RS06830 11232d9b6424b668cdb6cb53934f0644 291 SUPERFAMILY SSF117396 9 267 2.35E-60 T 25-04-2016 IPR002763 Protein of unknown function DUF72 SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PANTHER PTHR24322:SF25 12 138 2.1E-61 T 25-04-2016 SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PANTHER PTHR24322:SF25 154 186 2.1E-61 T 25-04-2016 SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.3E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.3E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.3E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.3E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.3E-29 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PANTHER PTHR24322 12 138 2.1E-61 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 PANTHER PTHR24322 154 186 2.1E-61 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 Pfam PF00106 short chain dehydrogenase 9 198 2.0E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 Gene3D G3DSA:3.40.50.720 2 259 4.2E-71 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20130 916adc46e89e36db1ca2768a5e91ccba 264 SUPERFAMILY SSF51735 1 259 1.08E-66 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-7 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 55 70 1.4E-7 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 344 8.5E-27 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 1.0E-23 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 PANTHER PTHR11649 1 435 2.1E-135 T 25-04-2016 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 SUPERFAMILY SSF52540 138 440 1.66E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 5.0E-23 T 25-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.6E-27 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 9.2E-24 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 PIRSF PIRSF006485 1 442 5.3E-170 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 SUPERFAMILY SSF52540 1 173 1.27E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Gene3D G3DSA:3.40.50.300 3 166 6.3E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Gene3D G3DSA:3.40.50.300 175 359 1.8E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 PANTHER PTHR11649:SF5 1 435 2.1E-135 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Hamap MF_00195 GTPase Der [der]. 2 437 37.136 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 Gene3D G3DSA:3.30.300.20 360 435 1.9E-22 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS09790 77ec7003dcc608f96c95392b95f97d5d 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 1.2E-167 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 PANTHER PTHR30055:SF71 5 173 1.8E-13 T 25-04-2016 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 PANTHER PTHR30055 5 173 1.8E-13 T 25-04-2016 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 2.2E-12 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 SUPERFAMILY SSF46689 2 70 8.21E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.2E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.2E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 SUPERFAMILY SSF48498 79 177 2.45E-24 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS12325 83372173aef1b3a7a77c25ad6efbb065 185 Gene3D G3DSA:1.10.357.10 2 177 3.1E-25 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS20710 85f03cf4d19147e5cea12fd2f5897a2a 612 SUPERFAMILY SSF55486 66 589 2.12E-37 T 25-04-2016 SMD_RS20710 85f03cf4d19147e5cea12fd2f5897a2a 612 Pfam PF01432 Peptidase family M3 391 580 1.1E-7 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 PANTHER PTHR11019 214 323 4.5E-23 T 25-04-2016 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 Pfam PF12833 Helix-turn-helix domain 235 315 1.4E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 PANTHER PTHR11019:SF54 214 323 4.5E-23 T 25-04-2016 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 Gene3D G3DSA:1.10.10.60 266 313 9.1E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 SMART SM00342 229 315 7.5E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 Gene3D G3DSA:1.10.10.60 216 265 7.0E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 SUPERFAMILY SSF46689 215 262 6.53E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13125 9eca9284ea2b70e08cdceb4ea0024cfa 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 311 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS06615 6bd7dda094d4c33592fa70eb8de284d2 375 SUPERFAMILY SSF56300 96 367 4.34E-43 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS06615 6bd7dda094d4c33592fa70eb8de284d2 375 Gene3D G3DSA:3.60.21.10 95 353 2.7E-34 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS06615 6bd7dda094d4c33592fa70eb8de284d2 375 Pfam PF00149 Calcineurin-like phosphoesterase 102 318 1.6E-14 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.3E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 Pfam PF03466 LysR substrate binding domain 94 291 1.9E-28 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 SUPERFAMILY SSF46785 8 115 7.65E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 Gene3D G3DSA:3.40.190.10 174 257 2.8E-11 T 25-04-2016 SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 Gene3D G3DSA:1.10.10.10 10 91 8.5E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 Gene3D G3DSA:3.40.190.10 96 173 9.1E-27 T 25-04-2016 SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 SUPERFAMILY SSF53850 96 295 6.15E-30 T 25-04-2016 SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 PANTHER PTHR30537:SF26 3 308 6.1E-73 T 25-04-2016 SMD_RS11955 bbf7e7783154b4ffd56a7922078b67b7 308 PANTHER PTHR30537 3 308 6.1E-73 T 25-04-2016 SMD_RS00965 28996b398bb949c1ce3fb3a95b2397c8 256 Pfam PF12833 Helix-turn-helix domain 173 251 1.5E-10 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS00965 28996b398bb949c1ce3fb3a95b2397c8 256 Gene3D G3DSA:1.10.10.10 159 188 4.4E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00965 28996b398bb949c1ce3fb3a95b2397c8 256 SMART SM00342 167 251 6.6E-8 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS00965 28996b398bb949c1ce3fb3a95b2397c8 256 Gene3D G3DSA:1.10.10.60 199 253 1.1E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 PANTHER PTHR11328 307 494 7.0E-134 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 PANTHER PTHR11328 1 268 7.0E-134 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 Gene3D G3DSA:1.20.1250.20 18 207 1.6E-7 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 Gene3D G3DSA:1.20.1250.20 267 478 1.5E-14 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 PANTHER PTHR11328:SF24 307 494 7.0E-134 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 PANTHER PTHR11328:SF24 1 268 7.0E-134 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 Pfam PF13347 MFS/sugar transport protein 15 270 3.3E-51 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 Pfam PF13347 MFS/sugar transport protein 304 473 3.9E-33 T 25-04-2016 SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 SUPERFAMILY SSF103473 14 266 1.27E-28 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS11725 73934d6c5918add6538aa563e3366c0f 494 SUPERFAMILY SSF103473 304 476 1.27E-28 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 468 4.5E-25 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 479 4.7E-235 T 25-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 1.3E-28 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.3E-28 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 1.3E-28 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.3E-28 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 SUPERFAMILY SSF51971 146 410 3.24E-64 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 Gene3D G3DSA:3.50.50.60 238 409 3.1E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 Gene3D G3DSA:1.10.1060.10 5 151 2.3E-41 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 Gene3D G3DSA:3.40.50.720 410 480 6.5E-30 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 Gene3D G3DSA:3.40.50.720 152 237 6.5E-30 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 PANTHER PTHR11938:SF93 36 479 1.1E-247 T 25-04-2016 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 SUPERFAMILY SSF46548 7 158 7.32E-37 T 25-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 1.9E-36 T 25-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SMD_RS00450 f0f83cae1bed34aab58b425dddf797b8 481 PANTHER PTHR11938 36 479 1.1E-247 T 25-04-2016 SMD_RS06520 bbe4c6dcba888e908e8731813757b734 375 PANTHER PTHR30294:SF2 1 364 4.1E-58 T 25-04-2016 SMD_RS06520 bbe4c6dcba888e908e8731813757b734 375 Pfam PF12698 ABC-2 family transporter protein 24 361 5.9E-30 T 25-04-2016 SMD_RS06520 bbe4c6dcba888e908e8731813757b734 375 PANTHER PTHR30294 1 364 4.1E-58 T 25-04-2016 SMD_RS04765 d4f5f683f3f05a20da5c5efeadac7350 199 SUPERFAMILY SSF51306 72 194 8.89E-20 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMD_RS04765 d4f5f683f3f05a20da5c5efeadac7350 199 Gene3D G3DSA:2.10.109.10 76 119 9.3E-9 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS04765 d4f5f683f3f05a20da5c5efeadac7350 199 Gene3D G3DSA:2.10.109.10 157 196 9.3E-9 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS04765 d4f5f683f3f05a20da5c5efeadac7350 199 Pfam PF10502 Signal peptidase, peptidase S26 50 195 2.4E-51 T 25-04-2016 IPR019533 Peptidase S26 SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 Gene3D G3DSA:3.40.50.150 25 209 3.4E-61 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 PIRSF PIRSF003078 8 212 1.2E-65 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 209 1.2E-52 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 PANTHER PTHR31760 14 209 5.5E-68 T 25-04-2016 SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 SUPERFAMILY SSF53335 24 208 7.97E-38 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 PANTHER PTHR31760:SF0 14 209 5.5E-68 T 25-04-2016 SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 3.0E-51 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMD_RS21530 41b08271ad2c0c0c3067be892fe596cd 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 26.138 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMD_RS01725 e12de5dc6e565cff2d4c8984718ae9d7 369 PANTHER PTHR21716 16 369 2.6E-129 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMD_RS01725 e12de5dc6e565cff2d4c8984718ae9d7 369 Pfam PF01594 Domain of unknown function DUF20 34 355 1.0E-42 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMD_RS01725 e12de5dc6e565cff2d4c8984718ae9d7 369 PANTHER PTHR21716:SF16 16 369 2.6E-129 T 25-04-2016 SMD_RS10695 ad45898bdbc916da0ff48f44ac22e572 257 Gene3D G3DSA:2.40.10.220 131 254 2.8E-12 T 25-04-2016 SMD_RS10695 ad45898bdbc916da0ff48f44ac22e572 257 Pfam PF07238 PilZ domain 130 244 7.3E-8 T 25-04-2016 IPR009875 PilZ domain GO:0035438 SMD_RS10695 ad45898bdbc916da0ff48f44ac22e572 257 Gene3D G3DSA:2.30.110.10 22 130 3.2E-29 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS10695 ad45898bdbc916da0ff48f44ac22e572 257 Pfam PF07317 Flagellar regulator YcgR 22 127 1.4E-29 T 25-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal SMD_RS10695 ad45898bdbc916da0ff48f44ac22e572 257 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 17 253 29.932 T 25-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552 17 241 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552 613 887 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552 463 597 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552 273 397 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 169 1.1E-17 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 SUPERFAMILY SSF56935 25 237 3.48E-95 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 SUPERFAMILY SSF56935 532 887 3.48E-95 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 SUPERFAMILY SSF56935 276 489 3.48E-95 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 Pfam PF00593 TonB dependent receptor 628 886 7.8E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 32 886 2.7E-182 T 25-04-2016 IPR010104 Bacterial TonB-dependent receptor SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 Gene3D G3DSA:2.170.130.10 51 174 4.9E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552:SF16 17 241 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552:SF16 613 887 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552:SF16 463 597 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 PANTHER PTHR32552:SF16 273 397 3.7E-86 T 25-04-2016 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 Gene3D G3DSA:2.40.170.20 538 887 1.4E-61 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 Gene3D G3DSA:2.40.170.20 429 490 1.4E-61 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18740 c6554125a2b38401088f9a0332ece5a2 887 Gene3D G3DSA:2.40.170.20 175 397 1.4E-61 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 Pfam PF12146 Serine aminopeptidase, S33 46 151 8.7E-16 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 Gene3D G3DSA:3.40.50.1820 46 267 1.5E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 1.1E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 1.1E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 1.1E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 SUPERFAMILY SSF53474 31 266 4.19E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 PANTHER PTHR10992 192 200 3.1E-19 T 25-04-2016 SMD_RS12815 21e5be8b50fbd59a4690c01f7c093070 273 PANTHER PTHR10992 26 173 3.1E-19 T 25-04-2016 SMD_RS10505 d2039180d1a08f77bf40a202e1b184e6 193 SUPERFAMILY SSF52218 5 191 6.83E-52 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS10505 d2039180d1a08f77bf40a202e1b184e6 193 PANTHER PTHR10204:SF40 3 193 8.2E-51 T 25-04-2016 SMD_RS10505 d2039180d1a08f77bf40a202e1b184e6 193 Gene3D G3DSA:3.40.50.360 5 191 7.3E-44 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS10505 d2039180d1a08f77bf40a202e1b184e6 193 PANTHER PTHR10204 3 193 8.2E-51 T 25-04-2016 SMD_RS10505 d2039180d1a08f77bf40a202e1b184e6 193 Pfam PF02525 Flavodoxin-like fold 4 176 1.5E-37 T 25-04-2016 IPR003680 Flavodoxin-like fold SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 PANTHER PTHR24031 6 506 5.5E-264 T 25-04-2016 SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 25-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 PANTHER PTHR24031:SF173 6 506 5.5E-264 T 25-04-2016 SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 SMART SM00487 28 235 4.2E-56 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 Gene3D G3DSA:3.40.50.300 225 385 1.9E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 SMART SM00490 271 352 4.0E-31 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 Pfam PF00271 Helicase conserved C-terminal domain 244 352 2.7E-27 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 Gene3D G3DSA:3.40.50.300 9 224 6.1E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 50.447 T 25-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 SUPERFAMILY SSF52540 84 363 4.65E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 Pfam PF12300 Protein of unknown function (DUF3628) 377 505 5.0E-41 T 25-04-2016 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 SMD_RS20030 557e8719e19e8ca68f1907229b40953d 573 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.9E-46 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 Gene3D G3DSA:3.30.2090.10 182 268 2.9E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PANTHER PTHR32063:SF21 1 1002 0.0 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 Gene3D G3DSA:3.30.70.1430 40 141 2.0E-27 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 Gene3D G3DSA:1.10.3850.10 789 1003 8.1E-52 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82714 183 266 1.7E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 Gene3D G3DSA:1.20.1640.10 285 497 1.9E-54 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82866 290 490 3.4E-45 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82693 137 182 1.57E-19 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82693 268 324 1.57E-19 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82866 780 1004 1.57E-43 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82693 40 133 4.71E-22 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 SUPERFAMILY SSF82714 697 780 1.2E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PANTHER PTHR32063 1 1002 0.0 T 25-04-2016 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 536 553 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-66 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 Pfam PF00873 AcrB/AcrD/AcrF family 4 1002 1.8E-287 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04815 9ce94a9b8952d71d25b077080b8e5b2d 1013 Gene3D G3DSA:3.30.2090.10 697 781 6.9E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS06390 4181dcf56034890e72bb609772a009af 768 SUPERFAMILY SSF48452 234 285 3.03E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 SUPERFAMILY SSF48452 486 544 3.03E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 PANTHER PTHR15704:SF8 423 454 1.9E-101 T 25-04-2016 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 PANTHER PTHR15704:SF8 474 766 1.9E-101 T 25-04-2016 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 Gene3D G3DSA:1.25.40.10 488 520 1.9E-6 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 Gene3D G3DSA:1.25.40.10 383 455 1.9E-6 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 PANTHER PTHR15704 423 454 1.9E-101 T 25-04-2016 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 PANTHER PTHR15704 474 766 1.9E-101 T 25-04-2016 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 Gene3D G3DSA:1.25.40.10 521 544 4.4E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS06390 4181dcf56034890e72bb609772a009af 768 Gene3D G3DSA:1.25.40.10 233 272 4.4E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS15355 78d101ad3079e343ca136a80df631d78 519 Pfam PF03929 PepSY-associated TM region 13 368 2.4E-47 T 25-04-2016 IPR005625 PepSY-associated TM protein SMD_RS15355 78d101ad3079e343ca136a80df631d78 519 PANTHER PTHR34219 2 514 1.7E-101 T 25-04-2016 SMD_RS15355 78d101ad3079e343ca136a80df631d78 519 PANTHER PTHR34219:SF3 2 514 1.7E-101 T 25-04-2016 SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.114 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 PANTHER PTHR21235:SF1 3 200 7.3E-75 T 25-04-2016 SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 PIRSF PIRSF000495 2 199 2.4E-60 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 Gene3D G3DSA:3.40.50.880 3 197 2.9E-65 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 196 1.0E-62 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 PANTHER PTHR21235 3 200 7.3E-75 T 25-04-2016 SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 SUPERFAMILY SSF52317 4 196 6.62E-47 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS10280 f37fd37aea9381703b6afee7fd3991a7 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 2.1E-19 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 PANTHER PTHR10264:SF46 46 231 2.7E-69 T 25-04-2016 SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 PANTHER PTHR10264:SF46 254 267 2.7E-69 T 25-04-2016 SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 SUPERFAMILY SSF117892 100 228 2.22E-13 T 25-04-2016 IPR001107 Band 7 domain SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 Pfam PF01145 SPFH domain / Band 7 family 66 237 5.1E-28 T 25-04-2016 IPR001107 Band 7 domain SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 SMART SM00244 62 226 8.5E-11 T 25-04-2016 IPR001107 Band 7 domain SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 PANTHER PTHR10264 46 231 2.7E-69 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS06170 8bf817455ca639bee68d48ab21bb0dfb 293 PANTHER PTHR10264 254 267 2.7E-69 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS05025 438d2cafd44cd51c75b1c998497507d5 284 Pfam PF00482 Type II secretion system (T2SS), protein F 119 242 5.1E-17 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS05025 438d2cafd44cd51c75b1c998497507d5 284 PANTHER PTHR35007 38 284 3.0E-41 T 25-04-2016 SMD_RS05025 438d2cafd44cd51c75b1c998497507d5 284 PANTHER PTHR35007:SF1 38 284 3.0E-41 T 25-04-2016 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 PANTHER PTHR30562 12 604 4.0E-262 T 25-04-2016 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 PANTHER PTHR30562:SF1 12 604 4.0E-262 T 25-04-2016 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Pfam PF14520 Helix-hairpin-helix domain 553 602 8.9E-6 T 25-04-2016 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 584 2.7E-174 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Gene3D G3DSA:4.10.860.10 187 246 1.7E-18 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Pfam PF02151 UvrB/uvrC motif 207 240 3.1E-9 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 538 5.0E-47 T 25-04-2016 IPR001162 UvrC family homology region SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 SMART SM00278 552 571 1.2 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 SMART SM00278 584 603 160.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 SUPERFAMILY SSF82771 21 104 5.1E-19 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 SMART SM00465 21 102 1.5E-16 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Pfam PF01541 GIY-YIG catalytic domain 23 97 6.6E-8 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 SUPERFAMILY SSF47781 519 605 1.94E-19 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Gene3D G3DSA:3.40.1440.10 22 98 1.5E-6 T 25-04-2016 IPR027299 GIY-YIG domain SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 SUPERFAMILY SSF46600 193 246 1.7E-13 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Gene3D G3DSA:1.10.150.20 551 605 1.5E-19 T 25-04-2016 SMD_RS07690 cdca01b8cacc14a2992a400cd7089b54 614 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 603 27.0 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 Gene3D G3DSA:1.10.287.130 127 192 1.9E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 353 4.3E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 142 201 8.8E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 SMART SM00387 245 356 4.6E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 SUPERFAMILY SSF47384 120 202 2.94E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 SUPERFAMILY SSF55874 191 354 1.96E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 SMART SM00388 137 201 1.1E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 SUPERFAMILY SSF158472 82 134 2.09E-5 T 25-04-2016 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 PANTHER PTHR24423:SF508 76 353 3.8E-62 T 25-04-2016 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 1.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 1.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 309 1.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 Pfam PF00672 HAMP domain 65 132 2.0E-10 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 SMART SM00304 82 136 2.8E-5 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 PANTHER PTHR24423 76 353 3.8E-62 T 25-04-2016 SMD_RS12160 2ceb44358e1c164cce5fac8a5a016203 358 Gene3D G3DSA:3.30.565.10 203 355 2.6E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 25-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 TIGRFAM TIGR00417 speE: spermidine synthase 7 277 5.8E-78 T 25-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 Gene3D G3DSA:3.40.50.150 59 283 5.5E-68 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 SUPERFAMILY SSF53335 7 282 6.51E-74 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 PANTHER PTHR11558 5 282 1.9E-99 T 25-04-2016 SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 Gene3D G3DSA:2.30.140.10 5 58 4.2E-17 T 25-04-2016 SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 283 35.162 T 25-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SMD_RS20505 26dd6a8b9136cf3c82894d08c04143c6 284 Pfam PF01564 Spermine/spermidine synthase 13 242 5.9E-66 T 25-04-2016 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SMART SM00342 103 186 2.4E-19 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Gene3D G3DSA:3.40.10.10 7 86 1.5E-31 T 25-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Pfam PF12833 Helix-turn-helix domain 109 188 2.4E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SUPERFAMILY SSF57884 5 85 1.07E-30 T 25-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SUPERFAMILY SSF48150 307 483 6.46E-44 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 323 470 3.3E-11 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Pfam PF06029 AlkA N-terminal domain 200 317 2.8E-34 T 25-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 PANTHER PTHR10242 197 243 2.5E-99 T 25-04-2016 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 PANTHER PTHR10242 264 483 2.5E-99 T 25-04-2016 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Gene3D G3DSA:1.10.340.30 318 434 2.5E-34 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Gene3D G3DSA:3.30.310.20 201 317 1.1E-32 T 25-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 140 182 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SMART SM00478 327 485 9.3E-18 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SUPERFAMILY SSF55945 200 298 8.0E-25 T 25-04-2016 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SUPERFAMILY SSF46689 140 190 2.82E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Gene3D G3DSA:1.10.1670.10 435 485 3.1E-18 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 PANTHER PTHR10242:SF3 197 243 2.5E-99 T 25-04-2016 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 PANTHER PTHR10242:SF3 264 483 2.5E-99 T 25-04-2016 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Pfam PF02805 Metal binding domain of Ada 12 75 1.2E-26 T 25-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SMART SM01009 200 317 3.0E-45 T 25-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Gene3D G3DSA:1.10.10.60 141 191 9.5E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 Gene3D G3DSA:1.10.10.60 87 140 3.0E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS06760 529ba66335bb0a49d1e9dc940ec2081a 492 SUPERFAMILY SSF46689 88 134 1.7E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 SUPERFAMILY SSF53756 58 407 5.97E-17 T 25-04-2016 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 3.6E-65 T 25-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 PANTHER PTHR23417 198 431 3.1E-128 T 25-04-2016 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 PANTHER PTHR23417 138 148 3.1E-128 T 25-04-2016 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 PANTHER PTHR23417 8 119 3.1E-128 T 25-04-2016 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 PANTHER PTHR23417:SF2 198 431 3.1E-128 T 25-04-2016 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 PANTHER PTHR23417:SF2 138 148 3.1E-128 T 25-04-2016 SMD_RS18325 f9dfa80900184f5bc4c4b96e26f2e636 432 PANTHER PTHR23417:SF2 8 119 3.1E-128 T 25-04-2016 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 Gene3D G3DSA:3.40.50.150 91 283 3.7E-69 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 Pfam PF05175 Methyltransferase small domain 106 198 6.8E-15 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 SUPERFAMILY SSF53335 22 281 6.07E-56 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 9 283 45.02 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 282 4.3E-76 T 25-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 Gene3D G3DSA:1.10.8.10 8 89 1.9E-25 T 25-04-2016 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 PANTHER PTHR18895:SF64 5 283 3.2E-99 T 25-04-2016 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 PANTHER PTHR18895 5 283 3.2E-99 T 25-04-2016 SMD_RS03860 e4ab41ea41f4d05af6f95dd280476e2c 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 279 1.1E-90 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 Gene3D G3DSA:3.40.50.720 5 256 3.7E-54 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PANTHER PTHR24322:SF456 159 191 1.1E-77 T 25-04-2016 SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PANTHER PTHR24322:SF456 13 143 1.1E-77 T 25-04-2016 SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PANTHER PTHR24322 159 191 1.1E-77 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PANTHER PTHR24322 13 143 1.1E-77 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 SUPERFAMILY SSF51735 4 256 7.11E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.1E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.1E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.1E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.1E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18285 dd7b792a8465cbfc9ca82ffc7f3a074d 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.3E-39 T 25-04-2016 SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 249 476 1.2E-88 T 25-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 SUPERFAMILY SSF52141 290 472 9.81E-55 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 Gene3D G3DSA:3.40.470.10 291 480 1.7E-62 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 PANTHER PTHR33693:SF3 152 480 7.7E-154 T 25-04-2016 SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 PANTHER PTHR33693 152 480 7.7E-154 T 25-04-2016 SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 SMART SM00986 316 476 2.0E-36 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 20 247 1.8E-66 T 25-04-2016 IPR023875 DNA metabolism protein, putative SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 Pfam PF03167 Uracil DNA glycosylase superfamily 316 471 6.1E-37 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 Pfam PF13566 Domain of unknown function (DUF4130 88 246 5.2E-45 T 25-04-2016 IPR025404 Domain of unknown function DUF4130 SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 302 468 8.5E-40 T 25-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain SMD_RS02855 d7438ebd1e6c084f4c49ca479cf59bd6 486 SMART SM00987 316 476 2.0E-36 T 25-04-2016 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 PANTHER PTHR30592 2 275 1.8E-99 T 25-04-2016 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 SUPERFAMILY SSF53927 16 274 1.41E-77 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 Gene3D G3DSA:3.10.20.10 37 125 2.6E-24 T 25-04-2016 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 32 275 3.4E-64 T 25-04-2016 IPR003786 Protein FdhD GO:0016783 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 Pfam PF02634 FdhD/NarQ family 35 274 5.2E-75 T 25-04-2016 IPR003786 Protein FdhD GO:0016783 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 PANTHER PTHR30592:SF1 2 275 1.8E-99 T 25-04-2016 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 Hamap MF_00187 Protein FdhD [fdhD]. 3 275 33.483 T 25-04-2016 IPR003786 Protein FdhD GO:0016783 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 PIRSF PIRSF015626 6 277 3.9E-79 T 25-04-2016 IPR003786 Protein FdhD GO:0016783 SMD_RS12310 af65fb8842fea38075b215b0c1e1e098 282 Gene3D G3DSA:3.40.140.10 140 276 3.1E-50 T 25-04-2016 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 PANTHER PTHR11733:SF65 41 667 2.9E-145 T 25-04-2016 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 SUPERFAMILY SSF55486 41 667 3.66E-140 T 25-04-2016 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 477 489 1.56E-6 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 571 582 1.56E-6 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 498 514 1.56E-6 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 PANTHER PTHR11733 41 667 2.9E-145 T 25-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 Pfam PF05649 Peptidase family M13 41 415 2.7E-66 T 25-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 Gene3D G3DSA:3.40.390.10 297 418 4.9E-72 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 Gene3D G3DSA:3.40.390.10 458 667 4.9E-72 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS15745 356b5d1ceece80fb9a97eeaed3ec2702 668 Pfam PF01431 Peptidase family M13 470 663 1.6E-41 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS14435 eebdbaaca281c1b049527a174b62cc3f 201 Gene3D G3DSA:4.10.1090.10 24 120 6.7E-4 T 25-04-2016 IPR024430 Endosialidase, C-terminal domain SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 Gene3D G3DSA:3.30.250.10 270 328 1.7E-27 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PRINTS PR00142 RecA protein signature 299 316 1.2E-84 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PRINTS PR00142 RecA protein signature 127 156 1.2E-84 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PRINTS PR00142 RecA protein signature 165 194 1.2E-84 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PRINTS PR00142 RecA protein signature 245 274 1.2E-84 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PRINTS PR00142 RecA protein signature 93 122 1.2E-84 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PRINTS PR00142 RecA protein signature 212 240 1.2E-84 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PANTHER PTHR22942:SF1 3 337 3.7E-199 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 SUPERFAMILY SSF52540 7 269 2.19E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 PANTHER PTHR22942 3 337 3.7E-199 T 25-04-2016 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 Pfam PF00154 recA bacterial DNA recombination protein 7 270 7.0E-140 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 ProSitePatterns PS00321 recA signature. 215 223 - T 25-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 8.0E-166 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 Hamap MF_00268 Protein RecA [recA]. 5 331 50.555 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 SUPERFAMILY SSF54752 270 327 3.53E-20 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 Gene3D G3DSA:3.40.50.300 30 269 4.2E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08880 0e6e7845934d30b4c4579f2a90af6d00 345 SMART SM00382 57 230 5.2E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11630 bb867221b175bc8907051169df01fa0f 142 SMART SM01034 4 95 7.3E-12 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS11630 bb867221b175bc8907051169df01fa0f 142 SUPERFAMILY SSF54975 3 103 5.56E-22 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS11630 bb867221b175bc8907051169df01fa0f 142 Pfam PF04940 Sensors of blue-light using FAD 6 94 8.5E-23 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS12960 6ce68a3e8569d9d6b462e2f01e089521 311 PANTHER PTHR30011:SF14 1 309 6.6E-55 T 25-04-2016 SMD_RS12960 6ce68a3e8569d9d6b462e2f01e089521 311 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 7 308 3.7E-102 T 25-04-2016 IPR020020 Luciferase-type oxidoreductase SMD_RS12960 6ce68a3e8569d9d6b462e2f01e089521 311 SUPERFAMILY SSF51679 33 310 1.15E-49 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12960 6ce68a3e8569d9d6b462e2f01e089521 311 PANTHER PTHR30011 1 309 6.6E-55 T 25-04-2016 SMD_RS12960 6ce68a3e8569d9d6b462e2f01e089521 311 Pfam PF00296 Luciferase-like monooxygenase 32 232 1.4E-37 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12960 6ce68a3e8569d9d6b462e2f01e089521 311 Gene3D G3DSA:3.20.20.30 10 309 1.1E-56 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 85 101 6.02E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 6.02E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 159 177 6.02E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 SUPERFAMILY SSF47240 29 182 1.53E-44 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 Pfam PF00210 Ferritin-like domain 43 182 2.6E-27 T 25-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 PIRSF PIRSF005900 20 182 7.1E-46 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 PANTHER PTHR30295:SF6 18 182 1.6E-66 T 25-04-2016 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 ProSitePatterns PS00819 Dps protein family signature 2. 87 101 - T 25-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 Gene3D G3DSA:1.20.1260.10 16 182 6.0E-64 T 25-04-2016 IPR012347 Ferritin-related SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 ProSitePatterns PS00818 Dps protein family signature 1. 61 77 - T 25-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SMD_RS16845 50a57643c88f27a778cd22a3b2bd06bc 182 PANTHER PTHR30295 18 182 1.6E-66 T 25-04-2016 SMD_RS03115 d5464dfceff0aa5129213e5a64f7af21 163 Pfam PF06271 RDD family 23 154 3.6E-22 T 25-04-2016 IPR010432 RDD SMD_RS03115 d5464dfceff0aa5129213e5a64f7af21 163 PANTHER PTHR36115:SF2 13 163 2.1E-49 T 25-04-2016 SMD_RS03115 d5464dfceff0aa5129213e5a64f7af21 163 PANTHER PTHR36115 13 163 2.1E-49 T 25-04-2016 SMD_RS14895 c5a3f77a43726f397657c4acdae01dec 675 Gene3D G3DSA:2.40.160.10 447 549 1.4E-4 T 25-04-2016 IPR023614 Porin domain SMD_RS14895 c5a3f77a43726f397657c4acdae01dec 675 SUPERFAMILY SSF48452 191 364 9.8E-14 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS14895 c5a3f77a43726f397657c4acdae01dec 675 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 16 673 4.2E-136 T 25-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 SMD_RS14895 c5a3f77a43726f397657c4acdae01dec 675 SUPERFAMILY SSF56935 443 543 4.68E-6 T 25-04-2016 SMD_RS14895 c5a3f77a43726f397657c4acdae01dec 675 Gene3D G3DSA:1.25.40.10 23 366 2.5E-19 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS11365 6b57f29b49366d0c1532fb0791f99ad9 161 PANTHER PTHR10057 14 159 3.8E-39 T 25-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SMD_RS11365 6b57f29b49366d0c1532fb0791f99ad9 161 PIRSF PIRSF005859 1 158 2.8E-43 T 25-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SMD_RS11365 6b57f29b49366d0c1532fb0791f99ad9 161 Pfam PF03073 TspO/MBR family 14 154 9.5E-39 T 25-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 122 1.7E-25 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 SUPERFAMILY SSF48300 4 59 1.57E-18 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 SUPERFAMILY SSF54736 52 122 1.29E-22 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 Gene3D G3DSA:1.20.5.710 2 51 2.4E-22 T 25-04-2016 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.8E-19 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.7E-43 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 Gene3D G3DSA:3.30.1390.10 52 122 2.8E-28 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.778 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04130 d0b6a126c49d99799c29022c68f51662 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 122 1.0E-17 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 Gene3D G3DSA:3.40.50.80 94 232 4.9E-37 T 25-04-2016 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 SUPERFAMILY SSF52343 99 232 4.58E-32 T 25-04-2016 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PANTHER PTHR19370 1 235 7.1E-49 T 25-04-2016 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 Pfam PF00175 Oxidoreductase NAD-binding domain 106 213 4.7E-17 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PANTHER PTHR19370:SF32 1 235 7.1E-49 T 25-04-2016 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 Gene3D G3DSA:2.40.30.10 4 93 3.1E-14 T 25-04-2016 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 200 208 6.8E-7 T 25-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 21 33 6.8E-7 T 25-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 88 97 6.8E-7 T 25-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 6.8E-7 T 25-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 SUPERFAMILY SSF63380 3 99 3.58E-15 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 Pfam PF00970 Oxidoreductase FAD-binding domain 15 93 1.1E-9 T 25-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 41 48 2.2E-7 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 132 141 2.2E-7 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 144 155 2.2E-7 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 200 208 2.2E-7 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS21100 13a2767f27b3ffce1885fb4bfd6dd740 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 105 124 2.2E-7 T 25-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 PANTHER PTHR11603:SF149 13 328 1.2E-150 T 25-04-2016 SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 1.7E-63 T 25-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 SUPERFAMILY SSF52540 17 302 2.11E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 PIRSF PIRSF002849 2 328 1.8E-127 T 25-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 PANTHER PTHR11603 13 328 1.2E-150 T 25-04-2016 SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 Gene3D G3DSA:1.10.8.300 216 323 3.2E-36 T 25-04-2016 SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 SMART SM00382 46 281 1.7E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS20950 e9628cb0702d44d5cf8a3d915529270e 328 Gene3D G3DSA:3.40.50.300 31 195 2.5E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 PANTHER PTHR22925 28 555 4.0E-156 T 25-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 Pfam PF04616 Glycosyl hydrolases family 43 51 343 1.4E-95 T 25-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 SUPERFAMILY SSF75005 51 359 1.43E-87 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 Gene3D G3DSA:2.60.120.200 375 559 1.7E-34 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 SUPERFAMILY SSF49899 374 558 5.14E-36 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 Gene3D G3DSA:2.115.10.20 50 353 2.8E-91 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SMD_RS11735 870802a55cafe90aca833a0585e9cd44 564 PANTHER PTHR22925:SF11 28 555 4.0E-156 T 25-04-2016 SMD_RS07380 21b576e527134ebd79613b49361bb001 253 Pfam PF07722 Peptidase C26 5 222 5.2E-64 T 25-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 SMD_RS07380 21b576e527134ebd79613b49361bb001 253 SUPERFAMILY SSF52317 26 247 8.06E-39 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS07380 21b576e527134ebd79613b49361bb001 253 PANTHER PTHR11922:SF18 85 253 2.3E-46 T 25-04-2016 SMD_RS07380 21b576e527134ebd79613b49361bb001 253 PANTHER PTHR11922:SF18 20 69 2.3E-46 T 25-04-2016 SMD_RS07380 21b576e527134ebd79613b49361bb001 253 PANTHER PTHR11922 85 253 2.3E-46 T 25-04-2016 SMD_RS07380 21b576e527134ebd79613b49361bb001 253 PANTHER PTHR11922 20 69 2.3E-46 T 25-04-2016 SMD_RS07380 21b576e527134ebd79613b49361bb001 253 Gene3D G3DSA:3.40.50.880 25 248 1.0E-40 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 Pfam PF00005 ABC transporter 358 506 3.1E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 SUPERFAMILY SSF90123 13 326 1.24E-63 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 PANTHER PTHR24221 9 582 6.9E-208 T 25-04-2016 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 Gene3D G3DSA:1.20.1560.10 13 328 3.4E-61 T 25-04-2016 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 Pfam PF00664 ABC transporter transmembrane region 25 293 1.2E-40 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 SUPERFAMILY SSF52540 330 577 2.19E-90 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 579 3.2E-219 T 25-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 SMART SM00382 367 552 2.5E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS07665 7e5132f44ad621c970d32cff9112bfe0 582 Gene3D G3DSA:3.40.50.300 341 569 3.0E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 1.5E-21 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 PANTHER PTHR10909:SF296 1 477 6.4E-237 T 25-04-2016 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Gene3D G3DSA:1.20.140.10 269 458 3.2E-49 T 25-04-2016 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Gene3D G3DSA:1.10.540.10 38 161 1.2E-12 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 1.6E-5 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 SUPERFAMILY SSF47203 288 460 4.51E-45 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 SUPERFAMILY SSF56645 38 280 2.88E-52 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Gene3D G3DSA:2.40.110.10 162 268 3.3E-25 T 25-04-2016 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 590 1.4E-30 T 25-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 5.4E-7 T 25-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 7.2E-15 T 25-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMD_RS15175 0c9ae60df9fcc589ff4f09fe213a53bf 596 PANTHER PTHR10909 1 477 6.4E-237 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Gene3D G3DSA:3.40.50.620 219 395 4.7E-58 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 SUPERFAMILY SSF52317 4 201 1.45E-55 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 521 8.3E-150 T 25-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.2E-7 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.2E-7 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.2E-7 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Pfam PF00117 Glutamine amidotransferase class-I 11 196 2.2E-40 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Pfam PF00958 GMP synthase C terminal domain 429 520 1.2E-42 T 25-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 SUPERFAMILY SSF52402 193 415 1.72E-58 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Gene3D G3DSA:3.40.50.880 4 218 2.8E-58 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Gene3D G3DSA:3.30.300.10 397 521 4.4E-52 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PANTHER PTHR11922 2 518 8.9E-286 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 SUPERFAMILY SSF54810 401 521 1.96E-49 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.4E-6 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.4E-6 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.4E-6 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 200 1.2E-75 T 25-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Pfam PF02540 NAD synthase 214 298 1.4E-8 T 25-04-2016 IPR022310 NAD/GMP synthase SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 521 55.431 T 25-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00097 Anthranilate synthase component II signature 53 62 2.7E-6 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 2.7E-6 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PRINTS PR00097 Anthranilate synthase component II signature 80 91 2.7E-6 T 25-04-2016 SMD_RS09820 b390510f4743e6d4ae65f122e7a35fa9 521 PANTHER PTHR11922:SF2 2 518 8.9E-286 T 25-04-2016 SMD_RS09620 e7a0a2b7814d3db829f2a5a39c29ebe6 521 PANTHER PTHR32057 1 521 7.9E-203 T 25-04-2016 SMD_RS09620 e7a0a2b7814d3db829f2a5a39c29ebe6 521 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 4 503 42.549 T 25-04-2016 IPR003846 Uncharacterised protein family UPF0061 SMD_RS09620 e7a0a2b7814d3db829f2a5a39c29ebe6 521 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 34 485 7.4E-130 T 25-04-2016 IPR003846 Uncharacterised protein family UPF0061 SMD_RS10550 027f15d1d9eeecfb7adea422857e3b6f 585 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 35 580 1.6E-136 T 25-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SMD_RS10550 027f15d1d9eeecfb7adea422857e3b6f 585 PANTHER PTHR30255 19 581 7.9E-189 T 25-04-2016 SMD_RS10550 027f15d1d9eeecfb7adea422857e3b6f 585 PANTHER PTHR30255:SF2 19 581 7.9E-189 T 25-04-2016 SMD_RS10550 027f15d1d9eeecfb7adea422857e3b6f 585 Pfam PF02272 DHHA1 domain 391 461 9.4E-14 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMD_RS10550 027f15d1d9eeecfb7adea422857e3b6f 585 Pfam PF01368 DHH family 84 213 5.1E-10 T 25-04-2016 IPR001667 DDH domain SMD_RS10550 027f15d1d9eeecfb7adea422857e3b6f 585 SUPERFAMILY SSF64182 59 476 1.03E-107 T 25-04-2016 SMD_RS01285 4903da9b280151fbcc86ff2dbc80a6c4 339 SUPERFAMILY SSF47240 6 326 4.49E-86 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS01285 4903da9b280151fbcc86ff2dbc80a6c4 339 Pfam PF00268 Ribonucleotide reductase, small chain 17 302 1.0E-76 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMD_RS01285 4903da9b280151fbcc86ff2dbc80a6c4 339 PIRSF PIRSF000355 3 337 3.9E-97 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMD_RS01285 4903da9b280151fbcc86ff2dbc80a6c4 339 PANTHER PTHR23409 17 326 1.7E-108 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMD_RS01285 4903da9b280151fbcc86ff2dbc80a6c4 339 PANTHER PTHR23409:SF18 17 326 1.7E-108 T 25-04-2016 SMD_RS01285 4903da9b280151fbcc86ff2dbc80a6c4 339 Gene3D G3DSA:1.10.620.20 16 306 7.0E-92 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SMD_RS15945 da943c4824eb5e492bbe10666391a5a1 150 SUPERFAMILY SSF54637 4 143 1.01E-21 T 25-04-2016 IPR029069 HotDog domain SMD_RS15945 da943c4824eb5e492bbe10666391a5a1 150 Gene3D G3DSA:3.10.129.10 2 147 1.7E-38 T 25-04-2016 IPR029069 HotDog domain SMD_RS15945 da943c4824eb5e492bbe10666391a5a1 150 Pfam PF14539 Domain of unknown function (DUF4442) 8 142 9.3E-18 T 25-04-2016 IPR027961 Protein of unknown function DUF4442 SMD_RS03280 161b71d61990e9f9baefa1b586873681 147 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 88 144 1.0E-14 T 25-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB SMD_RS03280 161b71d61990e9f9baefa1b586873681 147 Pfam PF11776 Nickel/cobalt transporter regulator 91 142 1.1E-19 T 25-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 SUPERFAMILY SSF52172 3 135 2.99E-21 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 Gene3D G3DSA:3.40.50.2300 3 124 9.1E-21 T 25-04-2016 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 SUPERFAMILY SSF46894 140 207 6.8E-17 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 PANTHER PTHR26402 3 207 2.7E-37 T 25-04-2016 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 Gene3D G3DSA:1.10.10.10 125 208 1.0E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 PANTHER PTHR26402:SF458 3 207 2.7E-37 T 25-04-2016 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 Pfam PF00072 Response regulator receiver domain 5 119 3.2E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 SMART SM00448 3 119 1.4E-10 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.6E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 SMART SM00421 146 203 5.0E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.0E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.0E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS15200 f7ebb7446aab20ab59ccb3763273d977 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.0E-5 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 SMART SM00358 156 224 3.9E-20 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 SUPERFAMILY SSF69065 10 158 4.36E-45 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 Pfam PF14622 Ribonuclease-III-like 18 139 4.9E-33 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 220 28.216 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 Gene3D G3DSA:3.30.160.20 153 223 9.4E-25 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 Gene3D G3DSA:1.10.1520.10 11 141 7.0E-41 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 PANTHER PTHR11207 11 224 1.7E-84 T 25-04-2016 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 SUPERFAMILY SSF54768 108 223 1.18E-27 T 25-04-2016 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 SMART SM00535 20 148 1.3E-48 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 223 1.1E-71 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMD_RS16225 1ca668f2574cfabed1a1ca51fa1bad07 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 1.9E-12 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 SUPERFAMILY SSF51182 2 176 6.38E-73 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 5.6E-79 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 4.0E-84 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 PANTHER PTHR21047:SF2 2 180 3.9E-74 T 25-04-2016 SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 Gene3D G3DSA:2.60.120.10 2 177 3.3E-78 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 PANTHER PTHR21047 2 180 3.9E-74 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMD_RS02990 49c8f3edb115ba23a1d21b528e76cfd9 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 1.0E-71 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 SMART SM00739 4 31 4.3E-6 T 25-04-2016 IPR005824 KOW SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 Gene3D G3DSA:2.30.30.30 4 92 2.0E-20 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 3.8E-23 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 1.9E-32 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 PANTHER PTHR12903 4 104 8.1E-41 T 25-04-2016 SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 SUPERFAMILY SSF50104 3 99 3.36E-29 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 Pfam PF00467 KOW motif 7 35 6.8E-6 T 25-04-2016 IPR005824 KOW SMD_RS04225 961750bc0594f2b9ed746243ea6c6981 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.599 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 1.1E-22 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 PANTHER PTHR30154:SF23 1 160 5.3E-106 T 25-04-2016 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 6.5E-15 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 6.5E-15 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 6.5E-15 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 25-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 SUPERFAMILY SSF46785 6 95 5.91E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 SMART SM00344 7 116 3.5E-35 T 25-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 SUPERFAMILY SSF54909 67 156 2.41E-22 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 Gene3D G3DSA:3.30.70.920 60 144 1.2E-30 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 53 3.1E-19 T 25-04-2016 SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 Gene3D G3DSA:1.10.10.10 8 59 5.6E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00275 a038cd25bbfde464ee75efc991d955a7 161 PANTHER PTHR30154 1 160 5.3E-106 T 25-04-2016 SMD_RS04985 c9a949de347abd611d23dcd47a6fb71e 255 Pfam PF12706 Beta-lactamase superfamily domain 32 201 3.3E-12 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS04985 c9a949de347abd611d23dcd47a6fb71e 255 Gene3D G3DSA:3.60.15.10 5 221 3.6E-21 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS04985 c9a949de347abd611d23dcd47a6fb71e 255 SUPERFAMILY SSF56281 5 216 3.78E-24 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS04985 c9a949de347abd611d23dcd47a6fb71e 255 PANTHER PTHR12553 28 185 5.2E-12 T 25-04-2016 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 SUPERFAMILY SSF46785 1 81 1.04E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 SMART SM00418 8 89 4.7E-17 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 PANTHER PTHR10108:SF855 15 284 2.4E-33 T 25-04-2016 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.3E-11 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.3E-11 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.3E-11 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 Gene3D G3DSA:1.10.10.10 1 85 2.5E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 1.7E-14 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 Pfam PF08241 Methyltransferase domain 152 245 1.7E-24 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 Gene3D G3DSA:3.40.50.150 115 305 2.5E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 SUPERFAMILY SSF53335 127 293 2.59E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS14360 0f96694f41d9360639f7053943efcf91 309 PANTHER PTHR10108 15 284 2.4E-33 T 25-04-2016 SMD_RS07460 e02aa6f1a4d57bc3b7e620f1b181f1a9 370 PANTHER PTHR30294:SF12 1 368 8.9E-106 T 25-04-2016 SMD_RS07460 e02aa6f1a4d57bc3b7e620f1b181f1a9 370 PANTHER PTHR30294 1 368 8.9E-106 T 25-04-2016 SMD_RS07460 e02aa6f1a4d57bc3b7e620f1b181f1a9 370 Pfam PF12698 ABC-2 family transporter protein 22 363 5.4E-47 T 25-04-2016 SMD_RS07460 e02aa6f1a4d57bc3b7e620f1b181f1a9 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 312 331 2.5E-7 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS07460 e02aa6f1a4d57bc3b7e620f1b181f1a9 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 292 311 2.5E-7 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS07460 e02aa6f1a4d57bc3b7e620f1b181f1a9 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 255 279 2.5E-7 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 Gene3D G3DSA:2.170.130.10 25 171 8.0E-37 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 Gene3D G3DSA:2.40.170.20 303 907 4.4E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 Gene3D G3DSA:2.40.170.20 172 240 4.4E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 PANTHER PTHR30069 1 903 5.9E-152 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 PANTHER PTHR30069:SF7 1 903 5.9E-152 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 SUPERFAMILY SSF56935 35 233 5.49E-95 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 SUPERFAMILY SSF56935 276 324 5.49E-95 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 SUPERFAMILY SSF56935 381 442 5.49E-95 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 SUPERFAMILY SSF56935 717 907 5.49E-95 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 SUPERFAMILY SSF56935 477 686 5.49E-95 T 25-04-2016 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 168 2.0E-25 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS04065 3d964d39c4fa5b9f2bd109d0d91f118f 912 Pfam PF00593 TonB dependent receptor 578 904 2.0E-31 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09400 e5e198ed6ea1f08a365a135673da0185 103 SUPERFAMILY SSF52172 1 98 1.57E-11 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS09400 e5e198ed6ea1f08a365a135673da0185 103 Gene3D G3DSA:3.40.50.2300 2 96 2.2E-11 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 Pfam PF01568 Molydopterin dinucleotide binding domain 642 749 2.9E-9 T 25-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 SUPERFAMILY SSF53706 51 630 4.71E-138 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 Pfam PF00384 Molybdopterin oxidoreductase 112 411 3.3E-23 T 25-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 Gene3D G3DSA:3.40.50.740 112 185 3.0E-49 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 Gene3D G3DSA:3.40.50.740 393 624 3.0E-49 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 PANTHER PTHR11615:SF114 56 255 1.6E-220 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 PANTHER PTHR11615:SF114 274 758 1.6E-220 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 SUPERFAMILY SSF50692 635 757 4.29E-15 T 25-04-2016 IPR009010 Aspartate decarboxylase-like domain SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 Gene3D G3DSA:3.40.228.10 186 392 2.0E-54 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 Gene3D G3DSA:2.40.40.20 638 755 1.2E-7 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 PIRSF PIRSF000144 1 760 0.0 T 25-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 PANTHER PTHR11615 56 255 1.6E-220 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 PANTHER PTHR11615 274 758 1.6E-220 T 25-04-2016 SMD_RS12305 42d78fe7ae7f2610ac61b2f0854ce0ae 761 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 16 755 2.5E-271 T 25-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 PIRSF PIRSF029347 1 386 6.1E-149 T 25-04-2016 IPR014555 RecF-like SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 SUPERFAMILY SSF52540 258 368 1.73E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 SUPERFAMILY SSF52540 1 177 1.73E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 PANTHER PTHR32182 1 372 7.5E-74 T 25-04-2016 SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 Gene3D G3DSA:3.40.50.300 269 367 2.3E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 Gene3D G3DSA:3.40.50.300 1 73 2.2E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 347 8.4E-28 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS06815 a6c641a17bea09fdeaf2de02d9f7bc23 386 PANTHER PTHR32182:SF13 1 372 7.5E-74 T 25-04-2016 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 PRINTS PR01021 OMPA domain signature 214 230 5.4E-17 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 PRINTS PR01021 OMPA domain signature 168 190 5.4E-17 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 PRINTS PR01021 OMPA domain signature 199 214 5.4E-17 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 Gene3D G3DSA:3.30.1330.60 158 273 1.5E-33 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 Pfam PF00691 OmpA family 167 259 2.5E-21 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 PANTHER PTHR30128 145 274 4.5E-28 T 25-04-2016 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 Pfam PF04355 SmpA / OmlA family 57 126 2.5E-15 T 25-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 ProSitePatterns PS01068 OmpA-like domain. 201 245 - T 25-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SMD_RS13115 38ee6f456f25a544852623b9d2fb8452 280 SUPERFAMILY SSF103088 158 273 5.76E-30 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS04180 c319682c53a0a9603443cad2c112c4fa 99 PANTHER PTHR11620 8 98 3.5E-30 T 25-04-2016 SMD_RS04180 c319682c53a0a9603443cad2c112c4fa 99 SUPERFAMILY SSF54189 6 97 4.68E-29 T 25-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04180 c319682c53a0a9603443cad2c112c4fa 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.356 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMD_RS04180 c319682c53a0a9603443cad2c112c4fa 99 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 25-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site SMD_RS04180 c319682c53a0a9603443cad2c112c4fa 99 Gene3D G3DSA:3.30.70.330 6 97 4.0E-32 T 25-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SMD_RS04180 c319682c53a0a9603443cad2c112c4fa 99 Pfam PF00276 Ribosomal protein L23 10 95 4.9E-30 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMD_RS03900 686bf2b99fe0ba3c4b53fff33c29b775 773 Pfam PF07793 Protein of unknown function (DUF1631) 10 765 1.3E-209 T 25-04-2016 IPR012434 Protein of unknown function DUF1631 SMD_RS12435 6692160bace29097c7453dc639678fd9 415 Pfam PF02321 Outer membrane efflux protein 25 210 1.3E-16 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS12435 6692160bace29097c7453dc639678fd9 415 Pfam PF02321 Outer membrane efflux protein 238 407 1.4E-20 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS12435 6692160bace29097c7453dc639678fd9 415 PANTHER PTHR30203 23 407 2.1E-40 T 25-04-2016 SMD_RS12435 6692160bace29097c7453dc639678fd9 415 Gene3D G3DSA:1.20.1600.10 21 407 5.3E-48 T 25-04-2016 SMD_RS12435 6692160bace29097c7453dc639678fd9 415 SUPERFAMILY SSF56954 2 407 2.09E-61 T 25-04-2016 SMD_RS10090 f903a2731c4c8fd324c9229402c85d83 334 Gene3D G3DSA:3.90.1200.10 114 284 3.2E-17 T 25-04-2016 SMD_RS10090 f903a2731c4c8fd324c9229402c85d83 334 SUPERFAMILY SSF56112 5 287 4.54E-33 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS10090 f903a2731c4c8fd324c9229402c85d83 334 Pfam PF01636 Phosphotransferase enzyme family 27 278 9.1E-19 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 SUPERFAMILY SSF55347 132 274 4.58E-59 T 25-04-2016 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.5E-37 T 25-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 391 3.6E-135 T 25-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 PANTHER PTHR30525 8 395 1.6E-210 T 25-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 SUPERFAMILY SSF69055 303 393 9.94E-30 T 25-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 Gene3D G3DSA:1.10.1740.10 313 393 1.2E-29 T 25-04-2016 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 152 239 1.0E-38 T 25-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 PIRSF PIRSF006205 7 396 2.2E-147 T 25-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 Gene3D G3DSA:3.40.50.720 5 156 8.4E-49 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 10 392 45.29 T 25-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 10 138 4.2E-41 T 25-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS06985 a1847a44a56c72cb728ba1fef6241f36 396 SUPERFAMILY SSF51735 8 156 8.39E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Gene3D G3DSA:3.40.50.1460 470 613 3.6E-19 T 25-04-2016 IPR029030 Caspase-like domain SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Pfam PF13181 Tetratricopeptide repeat 846 876 4.0E-4 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Pfam PF01522 Polysaccharide deacetylase 248 379 1.2E-25 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 SUPERFAMILY SSF88713 232 442 1.17E-50 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 PANTHER PTHR10587:SF70 238 441 1.8E-69 T 25-04-2016 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 ProSitePatterns PS00018 EF-hand calcium-binding domain. 667 679 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Pfam PF13432 Tetratricopeptide repeat 782 842 3.2E-9 T 25-04-2016 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 SMART SM00028 810 843 0.0034 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 SMART SM00028 844 877 0.026 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 SMART SM00028 776 809 0.11 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Pfam PF00656 Caspase domain 472 667 3.1E-22 T 25-04-2016 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Gene3D G3DSA:1.25.40.10 779 886 4.0E-26 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 SUPERFAMILY SSF52129 467 664 9.94E-16 T 25-04-2016 IPR029030 Caspase-like domain SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 SUPERFAMILY SSF48452 773 887 1.02E-23 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 Gene3D G3DSA:3.20.20.370 234 442 2.6E-53 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS21960 4aefab137ad4a06ef54ea87961040026 890 PANTHER PTHR10587 238 441 1.8E-69 T 25-04-2016 SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Gene3D G3DSA:3.40.50.1220 197 264 7.2E-42 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Gene3D G3DSA:3.40.50.1220 5 30 7.2E-42 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Gene3D G3DSA:3.40.50.1220 80 117 7.2E-42 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Pfam PF02146 Sir2 family 20 221 6.6E-48 T 25-04-2016 IPR003000 Sirtuin family GO:0070403 SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 1 266 61.222 T 25-04-2016 IPR026587 Sirtuin, class II SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 PANTHER PTHR11085 5 141 2.4E-121 T 25-04-2016 IPR003000 Sirtuin family GO:0070403 SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 PANTHER PTHR11085 159 263 2.4E-121 T 25-04-2016 IPR003000 Sirtuin family GO:0070403 SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 PANTHER PTHR11085:SF22 5 141 2.4E-121 T 25-04-2016 SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 PANTHER PTHR11085:SF22 159 263 2.4E-121 T 25-04-2016 SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 SUPERFAMILY SSF52467 5 265 2.9E-81 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Gene3D G3DSA:3.30.1600.10 118 191 7.6E-22 T 25-04-2016 IPR026591 Sirtuin family, catalytic core small domain SMD_RS01300 a4262e0f6d83dd076de6e9e94cd32fff 268 Gene3D G3DSA:3.30.1600.10 31 66 7.6E-22 T 25-04-2016 IPR026591 Sirtuin family, catalytic core small domain SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 Gene3D G3DSA:3.30.930.10 8 216 7.6E-103 T 25-04-2016 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 293 2.0E-148 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 302 3.2E-160 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 SUPERFAMILY SSF55681 10 293 5.47E-133 T 25-04-2016 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 Gene3D G3DSA:1.20.58.180 218 298 4.2E-38 T 25-04-2016 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 3.5E-67 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 3.5E-67 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 3.5E-67 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 3.5E-67 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 3.5E-67 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 3.5E-67 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 PANTHER PTHR30075 1 303 2.8E-256 T 25-04-2016 SMD_RS21625 1fba79d2acfe1cb7f5df1455698daa2f 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 59.752 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMD_RS12965 f5d2f3a14e0ca3d123deda52a6b8dcd4 149 PANTHER PTHR23091 1 133 8.1E-15 T 25-04-2016 SMD_RS12965 f5d2f3a14e0ca3d123deda52a6b8dcd4 149 Gene3D G3DSA:3.40.630.30 3 136 2.9E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS12965 f5d2f3a14e0ca3d123deda52a6b8dcd4 149 Pfam PF13673 Acetyltransferase (GNAT) domain 28 146 1.0E-31 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS12965 f5d2f3a14e0ca3d123deda52a6b8dcd4 149 SUPERFAMILY SSF55729 2 138 2.03E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 PANTHER PTHR30055:SF73 1 171 1.1E-48 T 25-04-2016 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.2E-15 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 25-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 PANTHER PTHR30055 1 171 1.1E-48 T 25-04-2016 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 Gene3D G3DSA:1.10.357.10 8 206 3.1E-38 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.0E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.0E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 SUPERFAMILY SSF46689 8 77 2.05E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09755 3196b34f29c8b9045c064572f6370331 217 SUPERFAMILY SSF48498 83 207 7.04E-30 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 PIRSF PIRSF001356 2 264 2.8E-147 T 25-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 Gene3D G3DSA:3.60.90.10 39 187 1.2E-46 T 25-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 2.4E-143 T 25-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 PANTHER PTHR33866:SF1 19 88 1.9E-163 T 25-04-2016 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 PANTHER PTHR33866:SF1 113 264 1.9E-163 T 25-04-2016 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 SUPERFAMILY SSF56276 47 175 3.88E-24 T 25-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 Pfam PF02675 S-adenosylmethionine decarboxylase 43 170 1.1E-30 T 25-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 156.23 T 25-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 PANTHER PTHR33866 19 88 1.9E-163 T 25-04-2016 SMD_RS20240 f16e98b901ee91bc81a969795865934e 264 PANTHER PTHR33866 113 264 1.9E-163 T 25-04-2016 SMD_RS20125 03db72fe98a3fd9ef19a03bf56fe8e30 725 PANTHER PTHR30509 3 713 7.8E-276 T 25-04-2016 SMD_RS20125 03db72fe98a3fd9ef19a03bf56fe8e30 725 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 715 8.7E-209 T 25-04-2016 IPR010019 Integral membrane protein, YccS SMD_RS20125 03db72fe98a3fd9ef19a03bf56fe8e30 725 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 717 8.3E-220 T 25-04-2016 IPR010020 Integral membrane protein, YccS/YhfK SMD_RS20125 03db72fe98a3fd9ef19a03bf56fe8e30 725 Pfam PF13515 Fusaric acid resistance protein-like 413 532 2.1E-20 T 25-04-2016 SMD_RS20125 03db72fe98a3fd9ef19a03bf56fe8e30 725 PANTHER PTHR30509:SF8 3 713 7.8E-276 T 25-04-2016 SMD_RS20125 03db72fe98a3fd9ef19a03bf56fe8e30 725 Pfam PF12805 FUSC-like inner membrane protein yccS 69 355 5.5E-102 T 25-04-2016 IPR032692 Integral membrane protein YccS, N-terminal SMD_RS09940 d34e1f03f13dadcac136cb5add5d59a0 174 Gene3D G3DSA:3.40.630.30 8 174 2.5E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09940 d34e1f03f13dadcac136cb5add5d59a0 174 Pfam PF00583 Acetyltransferase (GNAT) family 72 155 1.0E-7 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS09940 d34e1f03f13dadcac136cb5add5d59a0 174 SUPERFAMILY SSF55729 8 161 6.13E-20 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 SUPERFAMILY SSF69593 37 199 3.92E-24 T 25-04-2016 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 SMART SM00563 85 197 6.9E-28 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 PANTHER PTHR10434 7 203 1.3E-68 T 25-04-2016 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 PANTHER PTHR10434 221 260 1.3E-68 T 25-04-2016 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 Pfam PF01553 Acyltransferase 83 194 6.0E-23 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 PANTHER PTHR10434:SF8 7 203 1.3E-68 T 25-04-2016 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 PANTHER PTHR10434:SF8 221 260 1.3E-68 T 25-04-2016 SMD_RS00625 48718e4aabfd0de35fba6e9fec7964d1 263 Gene3D G3DSA:3.40.1130.10 83 194 1.1E-11 T 25-04-2016 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 Gene3D G3DSA:3.30.470.20 97 239 1.8E-50 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 PANTHER PTHR11815 1 389 1.6E-221 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 PIRSF PIRSF001554 1 388 9.2E-148 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 SUPERFAMILY SSF52210 239 385 1.7E-53 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 Gene3D G3DSA:3.30.1490.20 22 96 1.9E-28 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 Pfam PF00549 CoA-ligase 262 380 6.4E-26 T 25-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 Gene3D G3DSA:3.40.50.261 241 383 3.5E-64 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.6E-156 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 SUPERFAMILY SSF56059 1 238 6.36E-76 T 25-04-2016 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 Pfam PF08442 ATP-grasp domain 2 202 1.2E-72 T 25-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.384 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMD_RS17430 aee1ff34ac39e09578d606e287b0c2dc 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 25-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 PIRSF PIRSF000148 7 342 5.9E-134 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 338 1.5E-138 T 25-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 PANTHER PTHR10174:SF2 51 342 6.8E-81 T 25-04-2016 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 SUPERFAMILY SSF51735 9 161 2.21E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 7 338 37.654 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 Gene3D G3DSA:3.30.360.10 147 320 6.4E-80 T 25-04-2016 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 324 1.1E-57 T 25-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 123 8.7E-33 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 PANTHER PTHR10174 51 342 6.8E-81 T 25-04-2016 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 Gene3D G3DSA:3.40.50.720 6 146 2.2E-65 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 SUPERFAMILY SSF55347 133 325 9.52E-75 T 25-04-2016 SMD_RS15595 fb796613ec9adbcacd17d30b7f32fd2e 342 SMART SM00859 9 124 1.1E-44 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 SUPERFAMILY SSF56349 5 279 1.38E-55 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 PANTHER PTHR30349 1 298 6.4E-140 T 25-04-2016 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 Pfam PF00589 Phage integrase family 108 272 1.1E-44 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 288 4.5E-106 T 25-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 85 4.7E-23 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 Gene3D G3DSA:1.10.443.10 104 286 1.2E-53 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 PANTHER PTHR30349:SF17 1 298 6.4E-140 T 25-04-2016 SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 Gene3D G3DSA:1.10.150.130 3 95 3.3E-29 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS18965 31e70fa34c1e7da648e25a3f1b9eba5d 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 286 33.743 T 25-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 Pfam PF03466 LysR substrate binding domain 95 302 6.7E-36 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 Gene3D G3DSA:3.40.190.10 187 270 4.0E-22 T 25-04-2016 SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 9.8E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 SUPERFAMILY SSF53850 96 304 2.02E-37 T 25-04-2016 SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 Gene3D G3DSA:3.40.190.10 99 186 5.8E-18 T 25-04-2016 SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 PANTHER PTHR30537 3 302 2.8E-161 T 25-04-2016 SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 SUPERFAMILY SSF46785 10 90 9.43E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 PANTHER PTHR30537:SF29 3 302 2.8E-161 T 25-04-2016 SMD_RS12520 e232897bdce1967f52fa92c9a0cd2e1c 308 Gene3D G3DSA:1.10.10.10 8 90 6.8E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 Gene3D G3DSA:3.40.50.300 2 225 3.4E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 PANTHER PTHR24220 5 220 4.1E-123 T 25-04-2016 SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 SMART SM00382 32 219 8.3E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 PANTHER PTHR24220:SF342 5 220 4.1E-123 T 25-04-2016 SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 SUPERFAMILY SSF52540 3 235 4.26E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19085 e0fd1b1bf3a22b9a17a58cd989c34ab0 241 Pfam PF00005 ABC transporter 23 171 6.7E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 SMART SM00388 448 513 7.1E-21 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 SUPERFAMILY SSF47384 434 514 2.35E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Gene3D G3DSA:1.10.287.130 454 509 1.1E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Gene3D G3DSA:3.40.50.2300 802 917 7.5E-39 T 25-04-2016 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 SUPERFAMILY SSF52172 802 918 1.85E-38 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Gene3D G3DSA:3.30.450.20 418 453 3.2E-5 T 25-04-2016 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 1.4E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 561 673 1.5E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Gene3D G3DSA:3.30.565.10 514 675 1.2E-43 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 Pfam PF00072 Response regulator receiver domain 805 914 8.3E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PANTHER PTHR24423 323 697 6.6E-158 T 25-04-2016 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PANTHER PTHR24423 802 919 6.6E-158 T 25-04-2016 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 3.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 671 3.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 629 3.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 652 3.2E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 SUPERFAMILY SSF55874 503 673 6.55E-43 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PANTHER PTHR24423:SF382 323 697 6.6E-158 T 25-04-2016 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 PANTHER PTHR24423:SF382 802 919 6.6E-158 T 25-04-2016 SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 SMART SM00387 560 674 1.1E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04060 ed39274d1ef73ab55c563694dcc8bab1 923 SMART SM00448 803 914 1.1E-36 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS17735 c567609e70689c20484806754094aa31 665 Pfam PF02780 Transketolase, C-terminal domain 547 658 2.9E-16 T 25-04-2016 IPR033248 Transketolase, C-terminal domain SMD_RS17735 c567609e70689c20484806754094aa31 665 PANTHER PTHR11624:SF1 331 665 0.0 T 25-04-2016 SMD_RS17735 c567609e70689c20484806754094aa31 665 PANTHER PTHR11624:SF1 2 311 0.0 T 25-04-2016 SMD_RS17735 c567609e70689c20484806754094aa31 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 2.0E-152 T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS17735 c567609e70689c20484806754094aa31 665 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 25-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS17735 c567609e70689c20484806754094aa31 665 Gene3D G3DSA:3.40.50.970 6 321 1.1E-126 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17735 c567609e70689c20484806754094aa31 665 Pfam PF02779 Transketolase, pyrimidine binding domain 357 528 1.4E-44 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS17735 c567609e70689c20484806754094aa31 665 PANTHER PTHR11624 331 665 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS17735 c567609e70689c20484806754094aa31 665 PANTHER PTHR11624 2 311 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS17735 c567609e70689c20484806754094aa31 665 SUPERFAMILY SSF52518 6 329 3.48E-117 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17735 c567609e70689c20484806754094aa31 665 SUPERFAMILY SSF52922 536 665 3.01E-42 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS17735 c567609e70689c20484806754094aa31 665 Gene3D G3DSA:3.40.50.920 541 665 1.1E-49 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS17735 c567609e70689c20484806754094aa31 665 Gene3D G3DSA:3.40.50.970 330 536 3.3E-73 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS17735 c567609e70689c20484806754094aa31 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 665 5.1E-285 T 25-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SMD_RS17735 c567609e70689c20484806754094aa31 665 SMART SM00861 357 528 1.3E-65 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS17735 c567609e70689c20484806754094aa31 665 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS17735 c567609e70689c20484806754094aa31 665 SUPERFAMILY SSF52518 344 528 4.98E-65 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS05425 99f511182e6f1655f35899924f43404b 294 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 294 37.931 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 SMD_RS05425 99f511182e6f1655f35899924f43404b 294 PANTHER PTHR30448 1 294 1.4E-125 T 25-04-2016 SMD_RS05425 99f511182e6f1655f35899924f43404b 294 PANTHER PTHR30448:SF0 1 294 1.4E-125 T 25-04-2016 SMD_RS05425 99f511182e6f1655f35899924f43404b 294 PIRSF PIRSF005052 9 294 5.6E-108 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 SMD_RS05425 99f511182e6f1655f35899924f43404b 294 Gene3D G3DSA:3.40.50.300 5 163 1.1E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05425 99f511182e6f1655f35899924f43404b 294 SUPERFAMILY SSF52540 11 163 4.08E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05425 99f511182e6f1655f35899924f43404b 294 Pfam PF03668 P-loop ATPase protein family 11 291 2.9E-90 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 PANTHER PTHR10909 32 465 2.9E-179 T 25-04-2016 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 Gene3D G3DSA:1.20.140.10 282 450 1.6E-38 T 25-04-2016 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 SUPERFAMILY SSF56645 74 299 4.23E-32 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 278 4.3E-12 T 25-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 Gene3D G3DSA:2.40.110.10 186 281 5.2E-18 T 25-04-2016 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 SUPERFAMILY SSF47203 295 449 1.77E-40 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 445 2.4E-28 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS16140 a109cb91f80a9135c6432cac7d8a0014 545 PANTHER PTHR10909:SF289 32 465 2.9E-179 T 25-04-2016 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 7.7E-45 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 470 488 7.7E-45 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 7.7E-45 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 7.7E-45 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 628 650 7.7E-45 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 7.7E-45 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PANTHER PTHR11757 13 696 0.0 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 Gene3D G3DSA:2.130.10.120 85 404 2.8E-14 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 Pfam PF00326 Prolyl oligopeptidase family 494 696 1.0E-49 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 PANTHER PTHR11757:SF13 13 696 0.0 T 25-04-2016 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 Gene3D G3DSA:3.40.50.1820 405 696 1.1E-91 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 SUPERFAMILY SSF53474 440 695 1.45E-50 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 SUPERFAMILY SSF50993 26 433 1.8E-58 T 25-04-2016 SMD_RS19000 dfaf4353cc2a7e666417e48306fe4b75 698 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 28 414 1.1E-33 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 PANTHER PTHR11075 1 357 4.7E-167 T 25-04-2016 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.815 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 Pfam PF03462 PCRF domain 13 203 5.6E-69 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 Gene3D G3DSA:1.20.58.410 8 93 2.4E-13 T 25-04-2016 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 SUPERFAMILY SSF75620 12 352 4.32E-129 T 25-04-2016 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 6.7E-154 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 Pfam PF00472 RF-1 domain 213 321 9.2E-44 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 SMART SM00937 63 178 8.2E-61 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 PANTHER PTHR11075:SF9 1 357 4.7E-167 T 25-04-2016 SMD_RS03990 dd7843c289021603e43de7cd0ffe514e 360 Gene3D G3DSA:3.30.160.20 213 288 1.1E-35 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PANTHER PTHR24093 55 919 0.0 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SUPERFAMILY SSF56784 553 703 8.45E-38 T 25-04-2016 IPR023214 HAD-like domain SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Gene3D G3DSA:2.70.150.10 65 102 8.0E-37 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Gene3D G3DSA:2.70.150.10 155 290 8.0E-37 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SMART SM00831 49 122 4.7E-11 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 823 844 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 426 439 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 718 733 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 768 781 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 873 894 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 736 747 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 305 321 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 788 804 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PRINTS PR01836 Magnesium-transporting ATPase signature 322 341 5.7E-75 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 PANTHER PTHR24093:SF356 55 919 0.0 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SUPERFAMILY SSF81653 188 289 1.83E-25 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Gene3D G3DSA:1.20.1110.10 629 911 4.7E-69 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Gene3D G3DSA:1.20.1110.10 103 154 4.7E-69 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SUPERFAMILY SSF81665 293 386 4.18E-105 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SUPERFAMILY SSF81665 709 917 4.18E-105 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SUPERFAMILY SSF81665 54 160 4.18E-105 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Pfam PF00690 Cation transporter/ATPase, N-terminus 52 117 2.5E-17 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Pfam PF00122 E1-E2 ATPase 127 383 1.2E-54 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 SUPERFAMILY SSF81660 361 564 2.29E-40 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Pfam PF00702 haloacid dehalogenase-like hydrolase 388 674 1.6E-19 T 25-04-2016 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Pfam PF00689 Cation transporting ATPase, C-terminus 743 910 6.8E-14 T 25-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 49 919 0.0 T 25-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 632 749 1.1E-29 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 198 426 3.0E-28 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 Gene3D G3DSA:3.40.1110.10 384 567 3.4E-37 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS12230 500780a2acd42d4510aad359c7810ba9 919 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 394 400 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMD_RS01275 1223055308bfc17be5508d2d1f5f7af9 278 Pfam PF11101 Protein of unknown function (DUF2884) 32 242 4.3E-26 T 25-04-2016 IPR021307 Protein of unknown function DUF2884 SMD_RS01135 586afca5acba15973329db23479cdcc0 203 Gene3D G3DSA:3.40.50.10320 3 201 4.4E-47 T 25-04-2016 IPR024078 Putative deacetylase LmbE-like domain SMD_RS01135 586afca5acba15973329db23479cdcc0 203 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 119 1.3E-21 T 25-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SMD_RS01135 586afca5acba15973329db23479cdcc0 203 PANTHER PTHR12993 3 166 5.4E-26 T 25-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SMD_RS01135 586afca5acba15973329db23479cdcc0 203 SUPERFAMILY SSF102588 4 202 3.27E-44 T 25-04-2016 IPR024078 Putative deacetylase LmbE-like domain SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 257 6.0E-50 T 25-04-2016 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 48.373 T 25-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 Gene3D G3DSA:3.20.20.60 10 289 1.6E-99 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 25-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 7.4E-124 T 25-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 SUPERFAMILY SSF51621 10 293 2.2E-101 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 PANTHER PTHR21631 8 292 8.6E-153 T 25-04-2016 SMD_RS16495 38c679822f29c7713f5a90ae3b6af7ca 297 PANTHER PTHR21631:SF4 8 292 8.6E-153 T 25-04-2016 SMD_RS05710 f37d84186570457730a0b22426d142b9 292 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 275 2.5E-50 T 25-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SMD_RS05710 f37d84186570457730a0b22426d142b9 292 Pfam PF02567 Phenazine biosynthesis-like protein 9 274 7.6E-51 T 25-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SMD_RS05710 f37d84186570457730a0b22426d142b9 292 PIRSF PIRSF016184 1 291 2.6E-69 T 25-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SMD_RS05710 f37d84186570457730a0b22426d142b9 292 Gene3D G3DSA:3.10.310.10 2 133 3.7E-36 T 25-04-2016 SMD_RS05710 f37d84186570457730a0b22426d142b9 292 Gene3D G3DSA:3.10.310.10 134 281 3.4E-32 T 25-04-2016 SMD_RS05710 f37d84186570457730a0b22426d142b9 292 SUPERFAMILY SSF54506 4 290 9.82E-62 T 25-04-2016 SMD_RS05710 f37d84186570457730a0b22426d142b9 292 PANTHER PTHR13774 1 292 3.6E-103 T 25-04-2016 SMD_RS05710 f37d84186570457730a0b22426d142b9 292 PANTHER PTHR13774:SF18 1 292 3.6E-103 T 25-04-2016 SMD_RS07830 15540c89dddd70ba08608142002cfb66 361 Pfam PF01758 Sodium Bile acid symporter family 63 257 3.7E-35 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SMD_RS07830 15540c89dddd70ba08608142002cfb66 361 PANTHER PTHR10361 10 352 6.5E-119 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SMD_RS07830 15540c89dddd70ba08608142002cfb66 361 PANTHER PTHR10361:SF31 10 352 6.5E-119 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMD_RS07830 15540c89dddd70ba08608142002cfb66 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 3.4E-117 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMD_RS07830 15540c89dddd70ba08608142002cfb66 361 PIRSF PIRSF005508 4 356 1.0E-117 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 Pfam PF03466 LysR substrate binding domain 98 292 2.7E-20 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 Gene3D G3DSA:3.40.190.10 193 260 1.8E-4 T 25-04-2016 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 294 1.8E-117 T 25-04-2016 IPR017685 HTH-type transcriptional regulator ArgP SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 SUPERFAMILY SSF53850 95 293 7.78E-26 T 25-04-2016 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 PANTHER PTHR30579:SF2 1 297 1.2E-118 T 25-04-2016 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 PANTHER PTHR30579 1 297 1.2E-118 T 25-04-2016 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.1E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 Gene3D G3DSA:3.40.190.10 94 192 2.3E-43 T 25-04-2016 SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 Gene3D G3DSA:1.10.10.10 7 82 9.8E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06540 b6403375aa5d5857bb734d8568b918c5 297 SUPERFAMILY SSF46785 6 113 1.15E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 7.6E-99 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 85 1.6E-42 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 25-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 Gene3D G3DSA:3.30.572.10 1 264 1.7E-130 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 Pfam PF00303 Thymidylate synthase 3 264 8.2E-121 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 PANTHER PTHR11548 1 264 3.4E-190 T 25-04-2016 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 SUPERFAMILY SSF55831 1 264 6.8E-129 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.6E-49 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.6E-49 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.6E-49 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.6E-49 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.6E-49 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS03725 e430bc6ee70c02678a54330963617a67 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.721 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMD_RS00260 db1f80cd158f52a70673c6d9bfb5a253 196 Pfam PF05995 Cysteine dioxygenase type I 62 177 1.2E-11 T 25-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 SMD_RS00260 db1f80cd158f52a70673c6d9bfb5a253 196 SUPERFAMILY SSF51182 16 185 3.96E-31 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS00260 db1f80cd158f52a70673c6d9bfb5a253 196 Gene3D G3DSA:2.60.120.10 55 185 5.1E-26 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS15965 640b0afb5d0127bc3cec97030088725d 261 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 61 242 8.1E-34 T 25-04-2016 IPR003744 Protein of unknown function DUF165 SMD_RS15965 640b0afb5d0127bc3cec97030088725d 261 PANTHER PTHR34300:SF2 19 261 9.7E-72 T 25-04-2016 SMD_RS15965 640b0afb5d0127bc3cec97030088725d 261 PANTHER PTHR34300 19 261 9.7E-72 T 25-04-2016 SMD_RS15965 640b0afb5d0127bc3cec97030088725d 261 Pfam PF02592 Putative vitamin uptake transporter 65 237 6.9E-42 T 25-04-2016 IPR003744 Protein of unknown function DUF165 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 Pfam PF10459 Peptidase S46 23 711 5.8E-229 T 25-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 Gene3D G3DSA:2.40.10.10 636 693 1.2E-15 T 25-04-2016 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 Gene3D G3DSA:2.40.10.10 602 604 1.2E-15 T 25-04-2016 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 PANTHER PTHR38469 5 712 4.5E-158 T 25-04-2016 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 Gene3D G3DSA:2.40.10.10 64 91 6.3E-4 T 25-04-2016 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 PANTHER PTHR38469:SF1 5 712 4.5E-158 T 25-04-2016 SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 SUPERFAMILY SSF50494 31 99 4.35E-26 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 SUPERFAMILY SSF50494 177 286 4.35E-26 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS21590 05fa44459b387d47fe256ca5579aa22f 715 SUPERFAMILY SSF50494 637 697 4.35E-26 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 Hamap MF_00970 Ribonuclease E [rne]. 1 1086 34.723 T 25-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 2.1E-163 T 25-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 Pfam PF10150 Ribonuclease E/G family 120 389 2.4E-96 T 25-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 SUPERFAMILY SSF50249 40 124 1.05E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 Pfam PF00575 S1 RNA binding domain 36 117 5.1E-12 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 Gene3D G3DSA:2.40.50.140 30 124 1.3E-33 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 PANTHER PTHR30001 1 830 0.0 T 25-04-2016 SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 PANTHER PTHR30001:SF1 1 830 0.0 T 25-04-2016 SMD_RS14705 191b20c4bb432c6195d6ffb51e9347d3 1088 SMART SM00316 37 118 7.9E-11 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS00515 f786d171dc3838b259cea8dfebd0e052 340 SUPERFAMILY SSF53098 149 331 4.4E-25 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS00515 f786d171dc3838b259cea8dfebd0e052 340 Gene3D G3DSA:3.30.420.10 150 331 1.4E-12 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS00515 f786d171dc3838b259cea8dfebd0e052 340 Pfam PF13482 RNase_H superfamily 150 324 1.7E-39 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS00515 f786d171dc3838b259cea8dfebd0e052 340 PANTHER PTHR38462 87 340 5.3E-49 T 25-04-2016 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 PANTHER PTHR32294 4 1026 0.0 T 25-04-2016 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 705 3.9E-141 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 Gene3D G3DSA:3.20.20.140 9 186 4.9E-10 T 25-04-2016 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 Pfam PF02811 PHP domain 10 126 2.8E-13 T 25-04-2016 IPR004013 PHP domain GO:0003824 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 SMART SM00481 9 76 9.0E-12 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 SUPERFAMILY SSF89550 8 86 8.44E-10 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 SUPERFAMILY SSF89550 122 187 8.44E-10 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 PANTHER PTHR32294:SF4 4 1026 0.0 T 25-04-2016 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 Pfam PF01336 OB-fold nucleic acid binding domain 946 1017 5.2E-7 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 8 1036 13.448 T 25-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 Pfam PF14579 Helix-hairpin-helix motif 778 866 4.2E-23 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS13420 c4b28b89eaac4a4c74f2a1acf3dd121b 1036 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 9 981 6.7E-162 T 25-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.6E-124 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 Pfam PF00108 Thiolase, N-terminal domain 4 261 1.1E-82 T 25-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 PIRSF PIRSF000429 1 391 7.4E-109 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 SUPERFAMILY SSF53901 4 268 2.23E-73 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 Gene3D G3DSA:3.40.47.10 4 123 4.9E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 Gene3D G3DSA:3.40.47.10 194 274 4.9E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.1E-43 T 25-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 PANTHER PTHR18919 1 391 8.0E-222 T 25-04-2016 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 25-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 25-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 Gene3D G3DSA:3.40.47.10 142 193 1.9E-60 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 Gene3D G3DSA:3.40.47.10 275 389 1.9E-60 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 PANTHER PTHR18919:SF110 1 391 8.0E-222 T 25-04-2016 SMD_RS16125 79c7d967b0fd9b286a00a27ae5f0ad08 391 SUPERFAMILY SSF53901 269 390 3.57E-43 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 8.9E-34 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.3E-26 T 25-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 SMART SM00905 4 114 9.1E-50 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.1E-32 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 SUPERFAMILY SSF55620 1 116 1.95E-36 T 25-04-2016 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 PANTHER PTHR20941 1 117 2.6E-31 T 25-04-2016 SMD_RS02120 2b2357cb3c7d3fba03f288564550756b 117 Gene3D G3DSA:3.30.1130.10 1 116 5.2E-42 T 25-04-2016 SMD_RS18400 90e849ae7b460c6308da5083cbe71065 379 Gene3D G3DSA:2.40.160.10 14 379 2.2E-96 T 25-04-2016 IPR023614 Porin domain SMD_RS18400 90e849ae7b460c6308da5083cbe71065 379 SUPERFAMILY SSF56935 20 373 3.66E-12 T 25-04-2016 SMD_RS18400 90e849ae7b460c6308da5083cbe71065 379 Pfam PF07396 Phosphate-selective porin O and P 24 379 7.4E-80 T 25-04-2016 IPR010870 Phosphate-selective porin O/P SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 PANTHER PTHR17224 6 192 1.2E-73 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 Pfam PF01195 Peptidyl-tRNA hydrolase 6 187 1.1E-51 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 2.5E-58 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 SUPERFAMILY SSF53178 5 189 1.23E-64 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.972 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMD_RS04030 cbb6dd4fd15b0c0770f209573751130a 192 Gene3D G3DSA:3.40.50.1470 5 190 5.4E-66 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 160 186 3.4E-7 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 120 129 3.4E-7 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 83 105 3.4E-7 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 54 185 1.9E-36 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 174 185 - T 25-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 83 93 - T 25-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 SUPERFAMILY SSF49329 47 185 6.41E-38 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 Gene3D G3DSA:2.60.40.200 49 187 1.3E-44 T 25-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS00730 ec6b20d05f070d345cb16cebb0a31ac0 189 PANTHER PTHR10003 32 185 3.0E-31 T 25-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 Gene3D G3DSA:3.10.50.40 210 323 1.3E-41 T 25-04-2016 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 PANTHER PTHR10516 204 325 1.3E-48 T 25-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 PANTHER PTHR10516 127 145 1.3E-48 T 25-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 122 226 2.3E-25 T 25-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 32 108 1.4E-7 T 25-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 Gene3D G3DSA:1.10.287.460 36 105 4.7E-15 T 25-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 Gene3D G3DSA:1.10.287.460 123 209 2.2E-25 T 25-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 235 321 2.6E-24 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMD_RS14400 1752fa7dabd0ddeb7497f274def02de2 325 SUPERFAMILY SSF54534 141 323 6.87E-52 T 25-04-2016 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 323 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 SUPERFAMILY SSF103473 21 431 5.62E-57 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 PANTHER PTHR23508:SF4 13 440 3.2E-238 T 25-04-2016 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 Gene3D G3DSA:1.20.1250.20 30 224 1.6E-21 T 25-04-2016 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 Gene3D G3DSA:1.20.1250.20 249 434 9.9E-14 T 25-04-2016 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 Pfam PF00083 Sugar (and other) transporter 30 235 1.1E-25 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS01645 480dd39912db6d7f9ddb8a114b18c8f3 444 PANTHER PTHR23508 13 440 3.2E-238 T 25-04-2016 SMD_RS19865 4e9a0987a4f4282034aefeb51a74688d 238 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 16 211 3.7E-19 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS19865 4e9a0987a4f4282034aefeb51a74688d 238 SUPERFAMILY SSF53850 16 218 9.19E-27 T 25-04-2016 SMD_RS19865 4e9a0987a4f4282034aefeb51a74688d 238 SMART SM00062 15 230 2.9E-13 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS19865 4e9a0987a4f4282034aefeb51a74688d 238 Gene3D G3DSA:3.40.190.10 118 185 4.8E-7 T 25-04-2016 SMD_RS19865 4e9a0987a4f4282034aefeb51a74688d 238 Gene3D G3DSA:3.40.190.10 31 117 1.4E-11 T 25-04-2016 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.4E-11 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 3.4E-246 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 SUPERFAMILY SSF52540 98 383 2.66E-94 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 SUPERFAMILY SSF50615 12 96 1.37E-26 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Gene3D G3DSA:3.40.50.300 96 384 1.8E-113 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Gene3D G3DSA:2.40.30.20 4 95 1.9E-30 T 25-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 SUPERFAMILY SSF47917 385 512 1.2E-45 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 PANTHER PTHR15184:SF3 1 498 3.2E-289 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 8.6E-44 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 PANTHER PTHR15184 1 498 3.2E-289 T 25-04-2016 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 3.6E-72 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.52 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS19150 3615a96919d9d5b059845e428a6eeb69 515 Gene3D G3DSA:1.20.150.20 385 511 2.3E-47 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 SUPERFAMILY SSF50677 194 363 5.36E-57 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 880 942 1.1E-12 T 25-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946 229 567 0.0 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946 876 938 0.0 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946 605 856 0.0 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946 1 205 0.0 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 942 15.406 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 SUPERFAMILY SSF47323 639 895 2.06E-60 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Gene3D G3DSA:1.10.287.380 873 942 1.1E-8 T 25-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 628 1.9E-196 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 924 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.3E-35 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PRINTS PR00986 Valyl-tRNA synthetase signature 468 489 1.3E-35 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PRINTS PR00986 Valyl-tRNA synthetase signature 367 380 1.3E-35 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PRINTS PR00986 Valyl-tRNA synthetase signature 251 268 1.3E-35 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PRINTS PR00986 Valyl-tRNA synthetase signature 503 521 1.3E-35 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Pfam PF08264 Anticodon-binding domain of tRNA 669 818 2.0E-40 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 SUPERFAMILY SSF52374 362 568 1.03E-130 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 SUPERFAMILY SSF52374 2 194 1.03E-130 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 SUPERFAMILY SSF52374 606 638 1.03E-130 T 25-04-2016 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946:SF5 229 567 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946:SF5 876 938 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946:SF5 605 856 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 PANTHER PTHR11946:SF5 1 205 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 SUPERFAMILY SSF46589 880 942 1.57E-10 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Gene3D G3DSA:1.10.730.10 628 811 3.6E-60 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Gene3D G3DSA:3.40.50.620 362 568 4.0E-133 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Gene3D G3DSA:3.40.50.620 7 195 4.0E-133 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Gene3D G3DSA:3.40.50.620 606 627 4.0E-133 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS03085 7e28a937fa2c6b652c57d7ee4cee7c3f 942 Gene3D G3DSA:3.90.740.10 199 358 1.4E-47 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Pfam PF00817 impB/mucB/samB family 10 156 9.9E-52 T 25-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Gene3D G3DSA:1.10.150.20 167 237 6.6E-25 T 25-04-2016 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Hamap MF_01113 DNA polymerase IV [dinB]. 4 353 37.414 T 25-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Gene3D G3DSA:3.30.1490.100 243 346 1.3E-22 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Pfam PF11798 IMS family HHH motif 168 199 3.8E-6 T 25-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 346 4.7E-13 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 SUPERFAMILY SSF56672 4 236 2.67E-93 T 25-04-2016 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 PANTHER PTHR11076 5 346 2.6E-144 T 25-04-2016 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 Gene3D G3DSA:3.30.70.270 68 166 1.4E-35 T 25-04-2016 SMD_RS02720 fd4c64a452193141ab2931a94662afd1 364 SUPERFAMILY SSF100879 244 347 8.44E-19 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.0E-32 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 25.258 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 SUPERFAMILY SSF54565 1 79 4.58E-30 T 25-04-2016 IPR023803 Ribosomal protein S16 domain SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 Gene3D G3DSA:3.30.1320.10 1 78 7.5E-35 T 25-04-2016 IPR023803 Ribosomal protein S16 domain SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-25 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 PANTHER PTHR12919 1 78 2.3E-41 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06420 8db9e80865416c2777e9a6e2e1b53e87 86 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 25-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 Gene3D G3DSA:3.30.70.80 115 134 2.7E-4 T 25-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 237 247 - T 25-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 PRINTS PR00723 Subtilisin serine protease family (S8) signature 233 246 1.0E-17 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 PRINTS PR00723 Subtilisin serine protease family (S8) signature 406 422 1.0E-17 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 PRINTS PR00723 Subtilisin serine protease family (S8) signature 168 187 1.0E-17 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 173 183 - T 25-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 PANTHER PTHR10795 11 468 4.1E-94 T 25-04-2016 IPR015500 Peptidase S8, subtilisin-related SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 500 565 3.9E-16 T 25-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 Gene3D G3DSA:3.40.50.200 135 469 7.4E-90 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 PANTHER PTHR10795:SF419 11 468 4.1E-94 T 25-04-2016 SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 407 417 - T 25-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 Pfam PF00082 Subtilase family 168 457 2.3E-52 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 SUPERFAMILY SSF52743 118 210 4.71E-78 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS03950 68be512f683eeafc0459368cb9aa87c5 579 SUPERFAMILY SSF52743 236 469 4.71E-78 T 25-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 PANTHER PTHR33778:SF3 18 245 9.4E-76 T 25-04-2016 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 PANTHER PTHR33778 18 245 9.4E-76 T 25-04-2016 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 Pfam PF02308 MgtC family 22 147 3.6E-34 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 PRINTS PR01837 MgtC/SapB protein signature 44 62 2.2E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 PRINTS PR01837 MgtC/SapB protein signature 101 125 2.2E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 PRINTS PR01837 MgtC/SapB protein signature 74 96 2.2E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS12235 57b23ce93ad53570d54c676f6e58d083 245 PRINTS PR01837 MgtC/SapB protein signature 25 44 2.2E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 SUPERFAMILY SSF51735 3 342 5.33E-93 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 1.1E-100 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 PANTHER PTHR10366:SF437 3 350 2.8E-167 T 25-04-2016 SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 335 4.0E-153 T 25-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 Gene3D G3DSA:3.90.25.10 191 335 5.0E-55 T 25-04-2016 SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 Gene3D G3DSA:3.40.50.720 4 190 2.1E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02980 e22c71052e84ca37efa33eea4e68acf3 351 PANTHER PTHR10366 3 350 2.8E-167 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Gene3D G3DSA:1.20.59.10 41 126 4.7E-21 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 SMART SM00830 48 129 6.6E-28 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 SUPERFAMILY SSF53850 130 314 5.86E-52 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Pfam PF01842 ACT domain 317 382 1.4E-12 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Gene3D G3DSA:3.40.190.10 127 215 7.0E-30 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 SUPERFAMILY SSF55021 301 396 1.52E-28 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Pfam PF01817 Chorismate mutase type II 48 127 3.8E-21 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Gene3D G3DSA:3.40.190.10 216 294 1.9E-19 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 TIGRFAM TIGR01807 CM_P2: chorismate mutase 44 119 5.0E-23 T 25-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 PANTHER PTHR21022:SF0 43 396 7.4E-133 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 PANTHER PTHR21022 43 396 7.4E-133 T 25-04-2016 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 SUPERFAMILY SSF48600 44 132 1.68E-19 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Pfam PF00800 Prephenate dehydratase 131 307 3.0E-57 T 25-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 PIRSF PIRSF001500 38 398 1.9E-136 T 25-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMD_RS14005 917f4a436f3e8244b62b2d2dfe912ded 399 Gene3D G3DSA:3.30.70.260 311 397 2.2E-30 T 25-04-2016 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 Pfam PF02308 MgtC family 19 140 1.7E-33 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 PRINTS PR01837 MgtC/SapB protein signature 22 41 4.5E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 PRINTS PR01837 MgtC/SapB protein signature 67 89 4.5E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 PRINTS PR01837 MgtC/SapB protein signature 94 118 4.5E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 PRINTS PR01837 MgtC/SapB protein signature 41 59 4.5E-39 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 PANTHER PTHR33778 1 237 4.5E-93 T 25-04-2016 SMD_RS13095 4239abf22a713a271206a578f1505cb3 238 PANTHER PTHR33778:SF3 1 237 4.5E-93 T 25-04-2016 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 13 351 46.088 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 Gene3D G3DSA:2.40.10.240 76 151 3.2E-14 T 25-04-2016 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 14 350 4.6E-128 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 Pfam PF02547 Queuosine biosynthesis protein 16 350 4.2E-130 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 Gene3D G3DSA:3.40.1780.10 189 350 1.5E-98 T 25-04-2016 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 Gene3D G3DSA:3.40.1780.10 13 74 1.5E-98 T 25-04-2016 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 PANTHER PTHR30307:SF0 14 355 4.0E-170 T 25-04-2016 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 SUPERFAMILY SSF111337 14 351 6.15E-131 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS09555 dd4d79addf450ed8c6103d68715752cb 355 PANTHER PTHR30307 14 355 4.0E-170 T 25-04-2016 SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 Pfam PF12147 Putative methyltransferase 273 581 1.4E-155 T 25-04-2016 IPR022744 Methyltransferase domain, putative SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 PANTHER PTHR11614 1 302 1.7E-182 T 25-04-2016 SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 SUPERFAMILY SSF53335 379 567 8.05E-19 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 SUPERFAMILY SSF53474 4 281 1.7E-29 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 Gene3D G3DSA:3.40.50.1820 13 278 8.1E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 Gene3D G3DSA:3.40.50.150 388 565 1.1E-10 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 Pfam PF12146 Serine aminopeptidase, S33 30 265 2.2E-66 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS19975 59f4bd28dc566de5d7039e5263e8f307 583 PANTHER PTHR11614:SF106 1 302 1.7E-182 T 25-04-2016 SMD_RS13480 edf62b2b3e8613b2985ea3024b0aeedb 144 SUPERFAMILY SSF55298 25 142 5.18E-24 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS13480 edf62b2b3e8613b2985ea3024b0aeedb 144 Gene3D G3DSA:3.30.1330.40 15 143 5.0E-28 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS13480 edf62b2b3e8613b2985ea3024b0aeedb 144 PANTHER PTHR11803 25 143 8.0E-19 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS13480 edf62b2b3e8613b2985ea3024b0aeedb 144 Pfam PF01042 Endoribonuclease L-PSP 26 142 1.6E-15 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS21580 cc549ab12d90c7d2694759e51e250586 191 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 186 25.477 T 25-04-2016 IPR022929 Putative manganese efflux pump MntP SMD_RS21580 cc549ab12d90c7d2694759e51e250586 191 Pfam PF02659 Putative manganese efflux pump 33 183 1.9E-51 T 25-04-2016 IPR003810 Putative manganese efflux pump SMD_RS21580 cc549ab12d90c7d2694759e51e250586 191 PANTHER PTHR35529 2 190 2.7E-69 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PANTHER PTHR32063:SF24 164 1066 0.0 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PANTHER PTHR32063:SF24 2 145 0.0 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 Gene3D G3DSA:3.30.70.1430 42 141 8.7E-28 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82866 838 1063 2.88E-51 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82693 301 357 1.94E-17 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82693 42 128 1.99E-22 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 Pfam PF00873 AcrB/AcrD/AcrF family 9 1055 1.5E-284 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 9.1E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 9.1E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PRINTS PR00702 Acriflavin resistance protein family signature 363 386 9.1E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PRINTS PR00702 Acriflavin resistance protein family signature 504 527 9.1E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 9.1E-16 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82714 217 297 4.97E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82714 750 839 1.11E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PANTHER PTHR32063 164 1066 0.0 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 PANTHER PTHR32063 2 145 0.0 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 Gene3D G3DSA:3.30.2090.10 216 296 1.4E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 Gene3D G3DSA:3.30.2090.10 749 839 8.2E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82866 323 531 1.31E-35 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1067 0.0 T 25-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 Gene3D G3DSA:1.10.3850.10 307 533 9.8E-49 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 Gene3D G3DSA:1.10.3850.10 846 1062 1.4E-55 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82693 177 215 1.94E-17 T 25-04-2016 SMD_RS00895 3158d6f4b2e8295de3c6008b634b0ecc 1081 SUPERFAMILY SSF82693 603 684 8.11E-5 T 25-04-2016 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 TIGRFAM TIGR00552 nadE: NAD+ synthetase 275 524 8.6E-55 T 25-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 SUPERFAMILY SSF56317 3 260 1.26E-60 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 Pfam PF00795 Carbon-nitrogen hydrolase 4 247 5.0E-29 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 Gene3D G3DSA:3.60.110.10 2 256 3.3E-60 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 PANTHER PTHR23090 2 540 1.1E-145 T 25-04-2016 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 SUPERFAMILY SSF52402 267 526 1.61E-71 T 25-04-2016 SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 Pfam PF02540 NAD synthase 268 518 3.5E-66 T 25-04-2016 IPR022310 NAD/GMP synthase SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 Gene3D G3DSA:3.40.50.620 268 525 1.2E-69 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS11255 946ed79e06d7831d5baa597cd1e6d098 548 PIRSF PIRSF006630 1 544 3.0E-171 T 25-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 SMD_RS16465 38ba4dcbb7c2b59af0f0f838501138dd 486 PANTHER PTHR16943:SF19 7 484 5.1E-248 T 25-04-2016 SMD_RS16465 38ba4dcbb7c2b59af0f0f838501138dd 486 SUPERFAMILY SSF103378 15 483 4.05E-149 T 25-04-2016 IPR005656 MmgE/PrpD GO:0016829 SMD_RS16465 38ba4dcbb7c2b59af0f0f838501138dd 486 Pfam PF03972 MmgE/PrpD family 20 464 3.0E-154 T 25-04-2016 IPR005656 MmgE/PrpD GO:0016829 SMD_RS16465 38ba4dcbb7c2b59af0f0f838501138dd 486 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 15 484 1.2E-239 T 25-04-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79|UniPathway: UPA00946 SMD_RS16465 38ba4dcbb7c2b59af0f0f838501138dd 486 Gene3D G3DSA:3.30.1330.120 289 428 1.1E-59 T 25-04-2016 SMD_RS16465 38ba4dcbb7c2b59af0f0f838501138dd 486 PANTHER PTHR16943 7 484 5.1E-248 T 25-04-2016 IPR005656 MmgE/PrpD GO:0016829 SMD_RS17785 fa353edfcebec122e85d55a024f6bf17 218 Gene3D G3DSA:1.10.287.540 58 94 3.7E-8 T 25-04-2016 IPR023218 UPF0291 structural domain SMD_RS17785 fa353edfcebec122e85d55a024f6bf17 218 Pfam PF04350 Pilus assembly protein, PilO 51 200 1.2E-50 T 25-04-2016 IPR007445 Pilus assembly protein, PilO SMD_RS17785 fa353edfcebec122e85d55a024f6bf17 218 Gene3D G3DSA:3.30.70.60 95 209 4.6E-35 T 25-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SMD_RS17785 fa353edfcebec122e85d55a024f6bf17 218 PANTHER PTHR39555:SF1 1 212 2.3E-54 T 25-04-2016 SMD_RS17785 fa353edfcebec122e85d55a024f6bf17 218 PANTHER PTHR39555 1 212 2.3E-54 T 25-04-2016 SMD_RS17785 fa353edfcebec122e85d55a024f6bf17 218 PIRSF PIRSF016482 1 216 1.7E-83 T 25-04-2016 IPR007445 Pilus assembly protein, PilO SMD_RS03025 67256e0c203f2564dc4b4bb62b8ebfdb 213 Gene3D G3DSA:3.40.50.10610 22 208 5.1E-63 T 25-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SMD_RS03025 67256e0c203f2564dc4b4bb62b8ebfdb 213 PANTHER PTHR36698:SF1 1 213 4.2E-58 T 25-04-2016 SMD_RS03025 67256e0c203f2564dc4b4bb62b8ebfdb 213 PANTHER PTHR36698 1 213 4.2E-58 T 25-04-2016 SMD_RS03025 67256e0c203f2564dc4b4bb62b8ebfdb 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 34 196 1.2E-39 T 25-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SMD_RS03025 67256e0c203f2564dc4b4bb62b8ebfdb 213 SUPERFAMILY SSF159594 34 203 1.94E-46 T 25-04-2016 SMD_RS14940 75de6a72f2e3783d3c9312435fbea69a 199 Gene3D G3DSA:3.40.630.30 6 196 2.5E-53 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14940 75de6a72f2e3783d3c9312435fbea69a 199 PANTHER PTHR13256:SF20 1 197 1.3E-82 T 25-04-2016 SMD_RS14940 75de6a72f2e3783d3c9312435fbea69a 199 PANTHER PTHR13256 1 197 1.3E-82 T 25-04-2016 SMD_RS14940 75de6a72f2e3783d3c9312435fbea69a 199 SUPERFAMILY SSF55729 8 180 3.4E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14940 75de6a72f2e3783d3c9312435fbea69a 199 Pfam PF13302 Acetyltransferase (GNAT) domain 18 155 3.6E-11 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 SUPERFAMILY SSF55874 285 440 4.58E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 PANTHER PTHR24423 177 442 4.1E-58 T 25-04-2016 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 SMART SM00387 339 444 2.5E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 PANTHER PTHR24423:SF399 177 442 4.1E-58 T 25-04-2016 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 SMART SM00388 237 295 6.0E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 440 1.8E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 6.5E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 6.5E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 6.5E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 6.5E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 Gene3D G3DSA:3.30.565.10 299 440 9.6E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 Gene3D G3DSA:1.10.287.130 229 291 1.2E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07645 e85425c2a51e859feece8731e263d5d4 447 SUPERFAMILY SSF47384 220 294 1.18E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17005 1b5801b92c46d3da1431e55134f95ca4 211 PANTHER PTHR34408 20 59 1.2E-31 T 25-04-2016 SMD_RS17005 1b5801b92c46d3da1431e55134f95ca4 211 PANTHER PTHR34408 85 209 1.2E-31 T 25-04-2016 SMD_RS17005 1b5801b92c46d3da1431e55134f95ca4 211 SUPERFAMILY SSF53955 14 209 3.66E-42 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS17005 1b5801b92c46d3da1431e55134f95ca4 211 Pfam PF00182 Chitinase class I 82 161 1.0E-5 T 25-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 SMD_RS17005 1b5801b92c46d3da1431e55134f95ca4 211 Gene3D G3DSA:3.30.20.10 109 145 1.8E-7 T 25-04-2016 SMD_RS06560 7a1606a813c331261750e8b3d900c1db 119 SUPERFAMILY SSF54593 9 118 4.83E-26 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS06560 7a1606a813c331261750e8b3d900c1db 119 Gene3D G3DSA:3.10.180.10 5 116 2.9E-34 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS06560 7a1606a813c331261750e8b3d900c1db 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 114 5.6E-9 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS19160 aa7e68363e49f11fe789981471e946cf 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.448 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMD_RS19160 aa7e68363e49f11fe789981471e946cf 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 6.2E-41 T 25-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SMD_RS19160 aa7e68363e49f11fe789981471e946cf 156 Gene3D G3DSA:1.20.5.620 63 122 2.6E-17 T 25-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SMD_RS19160 aa7e68363e49f11fe789981471e946cf 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.1E-30 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMD_RS19160 aa7e68363e49f11fe789981471e946cf 156 SUPERFAMILY SSF81573 62 121 3.27E-12 T 25-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SMD_RS19160 aa7e68363e49f11fe789981471e946cf 156 PANTHER PTHR33445 1 156 2.5E-44 T 25-04-2016 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 PRINTS PR00095 Anthranilate synthase component I signature 399 413 3.9E-18 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 PRINTS PR00095 Anthranilate synthase component I signature 384 398 3.9E-18 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 PRINTS PR00095 Anthranilate synthase component I signature 304 317 3.9E-18 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 PRINTS PR00095 Anthranilate synthase component I signature 290 303 3.9E-18 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 99 446 6.3E-130 T 25-04-2016 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 145 2.0E-6 T 25-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 SUPERFAMILY SSF56322 16 451 2.35E-124 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 Gene3D G3DSA:3.60.120.10 23 451 2.5E-138 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 Pfam PF00425 chorismate binding enzyme 189 442 4.7E-96 T 25-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SMD_RS05180 78321b0401ac935cdfe308f948f13583 454 PANTHER PTHR11236 17 450 7.9E-126 T 25-04-2016 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 Gene3D G3DSA:2.30.30.30 119 195 3.5E-33 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 PANTHER PTHR13691 1 274 2.4E-139 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 Gene3D G3DSA:2.40.50.140 1 114 5.3E-48 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 PIRSF PIRSF002158 6 275 1.0E-95 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.9E-129 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 SMART SM01383 42 118 2.5E-43 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 3.2E-54 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 SUPERFAMILY SSF50249 3 125 1.34E-47 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 25-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 SUPERFAMILY SSF50104 127 273 5.66E-57 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.3E-33 T 25-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 PANTHER PTHR13691:SF5 1 274 2.4E-139 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 SMART SM01382 124 253 4.3E-88 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 Gene3D G3DSA:4.10.950.10 196 274 7.9E-33 T 25-04-2016 IPR014726 Ribosomal protein L2, domain 3 SMD_RS04185 6b99b086fe54a3b155503ba4b98627eb 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.473 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 Gene3D G3DSA:3.30.1150.10 308 408 1.1E-9 T 25-04-2016 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 328 405 7.0E-20 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 PANTHER PTHR34978 91 292 5.6E-21 T 25-04-2016 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 Pfam PF05569 BlaR1 peptidase M56 8 260 2.4E-37 T 25-04-2016 IPR008756 Peptidase M56 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 SUPERFAMILY SSF74653 327 404 6.8E-20 T 25-04-2016 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 PANTHER PTHR34978:SF2 91 292 5.6E-21 T 25-04-2016 SMD_RS17705 a468f62f38eb9e4b0caa110d231dbc18 413 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 330 405 7.7E-15 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS05960 aae2c51e467cce4d72312973eb1e9d60 214 Pfam PF07681 DoxX 22 107 1.6E-16 T 25-04-2016 IPR032808 DoxX family SMD_RS05960 aae2c51e467cce4d72312973eb1e9d60 214 PANTHER PTHR33452 20 158 2.7E-49 T 25-04-2016 SMD_RS05960 aae2c51e467cce4d72312973eb1e9d60 214 PANTHER PTHR33452:SF7 20 158 2.7E-49 T 25-04-2016 SMD_RS09945 7d7883d5854014e9955fedcd52b16043 589 PANTHER PTHR37417 1 583 0.0 T 25-04-2016 SMD_RS09945 7d7883d5854014e9955fedcd52b16043 589 Pfam PF06100 MCRA family 23 520 1.5E-215 T 25-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 SMD_RS09945 7d7883d5854014e9955fedcd52b16043 589 Gene3D G3DSA:3.50.50.60 28 77 3.8E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09945 7d7883d5854014e9955fedcd52b16043 589 Gene3D G3DSA:3.50.50.60 178 268 3.8E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09945 7d7883d5854014e9955fedcd52b16043 589 SUPERFAMILY SSF51905 28 256 1.19E-16 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09945 7d7883d5854014e9955fedcd52b16043 589 PANTHER PTHR37417:SF1 1 583 0.0 T 25-04-2016 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 PANTHER PTHR11142 1 247 2.3E-85 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 Gene3D G3DSA:3.30.70.660 107 239 1.6E-41 T 25-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 PIRSF PIRSF001430 1 254 4.8E-65 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 244 30.843 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 SUPERFAMILY SSF55120 1 251 3.31E-81 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 238 4.8E-59 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 Pfam PF01416 tRNA pseudouridine synthase 145 240 3.3E-25 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 Pfam PF01416 tRNA pseudouridine synthase 8 104 4.9E-5 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15580 d6ade84b38aca333e6417f60f7c8ea57 256 Gene3D G3DSA:3.30.70.580 1 105 2.5E-32 T 25-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 8.0E-22 T 25-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 25-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 SUPERFAMILY SSF143243 7 66 7.19E-50 T 25-04-2016 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 SUPERFAMILY SSF143243 111 219 7.19E-50 T 25-04-2016 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 199 4.6E-37 T 25-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 PANTHER PTHR10884 1 64 4.0E-63 T 25-04-2016 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 PANTHER PTHR10884 113 217 4.0E-63 T 25-04-2016 SMD_RS15470 ac68e64354409af9b7748a021a6f30f5 249 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 7 207 30.907 T 25-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SMD_RS11035 76166d6f5bc21abb742ac2a0464dcc72 153 Pfam PF00293 NUDIX domain 12 125 4.3E-18 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS11035 76166d6f5bc21abb742ac2a0464dcc72 153 PANTHER PTHR22769:SF14 7 128 3.4E-28 T 25-04-2016 SMD_RS11035 76166d6f5bc21abb742ac2a0464dcc72 153 SUPERFAMILY SSF55811 8 142 4.6E-30 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS11035 76166d6f5bc21abb742ac2a0464dcc72 153 Gene3D G3DSA:3.90.79.10 9 149 1.2E-33 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS11035 76166d6f5bc21abb742ac2a0464dcc72 153 PANTHER PTHR22769 7 128 3.4E-28 T 25-04-2016 SMD_RS11035 76166d6f5bc21abb742ac2a0464dcc72 153 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS10690 6a459d709b43c2ede35078b439dc791b 163 Pfam PF01584 CheW-like domain 14 150 1.6E-39 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10690 6a459d709b43c2ede35078b439dc791b 163 PANTHER PTHR22617 14 163 5.5E-52 T 25-04-2016 SMD_RS10690 6a459d709b43c2ede35078b439dc791b 163 Gene3D G3DSA:2.40.50.180 52 90 1.3E-10 T 25-04-2016 SMD_RS10690 6a459d709b43c2ede35078b439dc791b 163 SUPERFAMILY SSF50341 14 151 1.7E-42 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10690 6a459d709b43c2ede35078b439dc791b 163 Gene3D G3DSA:2.30.30.40 91 141 1.6E-8 T 25-04-2016 SMD_RS10690 6a459d709b43c2ede35078b439dc791b 163 SMART SM00260 10 147 3.8E-42 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 SUPERFAMILY SSF52833 266 407 4.07E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 Gene3D G3DSA:2.60.120.260 439 588 9.7E-47 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 PANTHER PTHR13833:SF51 45 414 7.8E-50 T 25-04-2016 SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 Gene3D G3DSA:3.40.30.10 270 413 7.3E-46 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 187 8.2E-12 T 25-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 Pfam PF00578 AhpC/TSA family 286 389 3.3E-9 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS02785 02688084a9114d180c9b034d2d874b2a 589 PANTHER PTHR13833 45 414 7.8E-50 T 25-04-2016 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PANTHER PTHR10283 10 415 2.8E-101 T 25-04-2016 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 Pfam PF03600 Citrate transporter 36 346 3.0E-28 T 25-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PANTHER PTHR10283:SF21 10 415 2.8E-101 T 25-04-2016 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PRINTS PR00758 Arsenical pump membrane protein signature 276 300 1.1E-20 T 25-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 1.1E-20 T 25-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PRINTS PR00758 Arsenical pump membrane protein signature 107 131 1.1E-20 T 25-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PRINTS PR00758 Arsenical pump membrane protein signature 358 383 1.1E-20 T 25-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMD_RS11805 db33e720750fa87d2e55f00eb62764ac 415 PRINTS PR00758 Arsenical pump membrane protein signature 391 415 1.1E-20 T 25-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 271 2.0E-61 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 Gene3D G3DSA:3.40.50.1000 190 276 2.6E-53 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 Gene3D G3DSA:3.40.50.1000 6 83 2.6E-53 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 244 2.1E-24 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 ProSitePatterns PS01229 Hypothetical cof family signature 2. 225 247 - T 25-04-2016 SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 Gene3D G3DSA:3.30.1240.10 95 189 6.4E-37 T 25-04-2016 SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 PANTHER PTHR10000:SF29 10 277 2.6E-111 T 25-04-2016 SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 SUPERFAMILY SSF56784 7 276 9.57E-70 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 271 4.5E-61 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMD_RS20595 38053580dd7d52418f671f2180010cdc 277 PANTHER PTHR10000 10 277 2.6E-111 T 25-04-2016 SMD_RS04890 abfaa853434302552131f884e599b8b2 94 PIRSF PIRSF017854 11 94 1.4E-35 T 25-04-2016 IPR016704 Conjugal transfer, TrbD SMD_RS04890 abfaa853434302552131f884e599b8b2 94 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 19 90 3.0E-5 T 25-04-2016 SMD_RS04890 abfaa853434302552131f884e599b8b2 94 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 16 89 7.7E-11 T 25-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 PANTHER PTHR21600:SF23 123 178 5.5E-77 T 25-04-2016 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 PANTHER PTHR21600:SF23 1 105 5.5E-77 T 25-04-2016 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 SUPERFAMILY SSF55120 2 177 3.52E-41 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 178 1.1E-52 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 PANTHER PTHR21600 123 178 5.5E-77 T 25-04-2016 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 PANTHER PTHR21600 1 105 5.5E-77 T 25-04-2016 SMD_RS21145 1ce248933a5ab482c77e9d28a23754d9 179 Pfam PF00849 RNA pseudouridylate synthase 2 149 4.8E-16 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS06275 f1c6347b7923bb7a80d5595b9de1bdb3 316 Pfam PF02401 LytB protein 3 284 1.6E-92 T 25-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SMD_RS06275 f1c6347b7923bb7a80d5595b9de1bdb3 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.634 T 25-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SMD_RS06275 f1c6347b7923bb7a80d5595b9de1bdb3 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 1.4E-99 T 25-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SMD_RS06275 f1c6347b7923bb7a80d5595b9de1bdb3 316 PANTHER PTHR30426 1 314 9.5E-159 T 25-04-2016 SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 400 37.292 T 25-04-2016 IPR017687 Outer membrane protein assembly factor BamB SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 399 4.1E-125 T 25-04-2016 IPR017687 Outer membrane protein assembly factor BamB SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SUPERFAMILY SSF50998 42 397 9.81E-79 T 25-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 PANTHER PTHR32303 1 390 1.2E-138 T 25-04-2016 SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 Gene3D G3DSA:2.140.10.10 11 400 6.2E-73 T 25-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 76 107 6.5E-5 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 259 290 140.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 297 328 0.087 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 163 194 56.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 207 239 0.55 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 122 154 4.8E-5 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 SMART SM00564 338 369 16.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 PANTHER PTHR32303:SF8 1 390 1.2E-138 T 25-04-2016 SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 Pfam PF13360 PQQ-like domain 57 112 1.1E-4 T 25-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SMD_RS09785 e98285d7e45ca132152d6b05010ef9ed 402 Pfam PF13360 PQQ-like domain 118 327 2.3E-44 T 25-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 SUPERFAMILY SSF51445 1 298 2.53E-84 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 25-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 332 46.75 T 25-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 PANTHER PTHR30480 1 278 2.2E-112 T 25-04-2016 SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 Gene3D G3DSA:3.20.20.300 1 296 3.2E-92 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 298 1.3E-81 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS16190 808a9bcb20c69b82436e7d1d64af6672 335 PANTHER PTHR30480:SF7 1 278 2.2E-112 T 25-04-2016 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SUPERFAMILY SSF47226 354 463 1.83E-9 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Pfam PF00072 Response regulator receiver domain 262 370 1.2E-15 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Gene3D G3DSA:1.10.287.130 18 75 2.0E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 PANTHER PTHR24423 19 413 1.5E-91 T 25-04-2016 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Gene3D G3DSA:3.40.50.2300 258 371 3.5E-24 T 25-04-2016 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Gene3D G3DSA:3.30.565.10 81 239 4.2E-44 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SUPERFAMILY SSF47384 18 79 1.86E-6 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SUPERFAMILY SSF55874 69 238 3.01E-41 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SMART SM00388 14 79 6.1E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SMART SM00387 126 239 3.1E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 127 236 4.2E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Pfam PF01627 Hpt domain 391 463 6.4E-7 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 Gene3D G3DSA:1.20.120.160 387 463 2.7E-8 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SUPERFAMILY SSF52172 258 374 3.56E-25 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 SMART SM00448 259 371 9.7E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 199 217 1.6E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 166 180 1.6E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 223 236 1.6E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS11165 8e71d85389b05746c78efd71b8989c74 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 184 194 1.6E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS03685 9d5ffc6ce973c5b3e7cd8d9c43e04ef7 233 Gene3D G3DSA:3.40.50.1110 30 230 9.7E-36 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS03685 9d5ffc6ce973c5b3e7cd8d9c43e04ef7 233 SUPERFAMILY SSF52266 40 230 1.39E-39 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS03685 9d5ffc6ce973c5b3e7cd8d9c43e04ef7 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 221 3.7E-11 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PANTHER PTHR11573:SF6 28 486 5.9E-283 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PANTHER PTHR11573:SF6 506 782 5.9E-283 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 176 774 2.9E-169 T 25-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PANTHER PTHR11573 28 486 5.9E-283 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PANTHER PTHR11573 506 782 5.9E-283 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 Gene3D G3DSA:3.20.70.20 436 614 9.3E-65 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 Gene3D G3DSA:3.20.70.20 655 773 9.3E-65 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 Gene3D G3DSA:3.20.70.20 162 375 9.3E-65 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 644 666 - T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 Pfam PF02867 Ribonucleotide reductase, barrel domain 254 771 3.4E-143 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 173 250 1.7E-16 T 25-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 SUPERFAMILY SSF51998 253 776 7.94E-166 T 25-04-2016 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PRINTS PR01183 Ribonucleotide reductase large chain signature 470 481 1.8E-39 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PRINTS PR01183 Ribonucleotide reductase large chain signature 566 588 1.8E-39 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PRINTS PR01183 Ribonucleotide reductase large chain signature 528 551 1.8E-39 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PRINTS PR01183 Ribonucleotide reductase large chain signature 329 348 1.8E-39 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PRINTS PR01183 Ribonucleotide reductase large chain signature 655 682 1.8E-39 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 PRINTS PR01183 Ribonucleotide reductase large chain signature 594 617 1.8E-39 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS13040 ac84e52cae8703d5c05157169eb08b1f 787 SUPERFAMILY SSF48168 36 252 5.36E-53 T 25-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 9.3E-66 T 25-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 Gene3D G3DSA:3.40.50.1860 1 113 1.3E-41 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 PANTHER PTHR21198:SF7 1 228 3.9E-79 T 25-04-2016 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 PANTHER PTHR21198 1 228 3.9E-79 T 25-04-2016 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 SUPERFAMILY SSF53681 118 228 7.85E-32 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 SUPERFAMILY SSF53681 1 116 3.27E-34 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 Gene3D G3DSA:3.40.50.1860 114 216 1.2E-34 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS15275 f18791ee0851ef617e27a5326362a37e 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 2.0E-56 T 25-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS11635 f259660ce9032645286cea985c0516ce 217 Gene3D G3DSA:3.90.550.10 2 194 2.9E-15 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS11635 f259660ce9032645286cea985c0516ce 217 Pfam PF00535 Glycosyl transferase family 2 4 131 4.0E-11 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS11635 f259660ce9032645286cea985c0516ce 217 SUPERFAMILY SSF53448 2 203 2.06E-25 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS05825 8f25591533444f67429991c093aed9ca 299 PANTHER PTHR12110 45 296 7.3E-73 T 25-04-2016 SMD_RS05825 8f25591533444f67429991c093aed9ca 299 Pfam PF01261 Xylose isomerase-like TIM barrel 116 252 3.9E-17 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05825 8f25591533444f67429991c093aed9ca 299 PANTHER PTHR12110:SF25 45 296 7.3E-73 T 25-04-2016 SMD_RS05825 8f25591533444f67429991c093aed9ca 299 Gene3D G3DSA:3.20.20.150 50 298 5.3E-61 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05825 8f25591533444f67429991c093aed9ca 299 SUPERFAMILY SSF51658 50 297 2.07E-58 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 PANTHER PTHR24221 135 665 6.1E-137 T 25-04-2016 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 SMART SM00382 479 663 6.7E-21 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 Gene3D G3DSA:1.20.1560.10 135 436 2.2E-60 T 25-04-2016 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 Pfam PF03412 Peptidase C39 family 1 111 6.8E-27 T 25-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 Pfam PF00005 ABC transporter 470 619 6.3E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 Gene3D G3DSA:3.90.70.10 1 110 1.7E-17 T 25-04-2016 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 Pfam PF00664 ABC transporter transmembrane region 139 406 3.3E-32 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 SUPERFAMILY SSF90123 134 428 1.11E-55 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 ProSitePatterns PS00211 ABC transporters family signature. 591 605 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 Gene3D G3DSA:3.40.50.300 453 669 1.1E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17525 11ade86bce3fc236c8cfacdaca3267ef 688 SUPERFAMILY SSF52540 448 666 7.72E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 Gene3D G3DSA:1.10.10.10 3 85 1.5E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 PANTHER PTHR30537:SF11 1 295 2.8E-125 T 25-04-2016 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 SUPERFAMILY SSF53850 89 295 1.03E-41 T 25-04-2016 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.5E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.5E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.5E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 Gene3D G3DSA:3.40.190.10 92 177 1.3E-25 T 25-04-2016 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 PANTHER PTHR30537 1 295 2.8E-125 T 25-04-2016 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 SUPERFAMILY SSF46785 4 86 1.8E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 Pfam PF03466 LysR substrate binding domain 88 293 1.8E-38 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.0E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18290 43dd3e02e5bf26ffec0da0b802f5bb25 301 Gene3D G3DSA:3.40.190.10 178 261 8.9E-8 T 25-04-2016 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 129 146 - T 25-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 PIRSF PIRSF000161 1 223 6.4E-62 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 Gene3D G3DSA:3.40.50.720 1 142 1.5E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 Gene3D G3DSA:3.30.360.10 158 192 1.3E-6 T 25-04-2016 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 16 223 24.916 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 SUPERFAMILY SSF51735 194 222 1.21E-23 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 SUPERFAMILY SSF51735 1 106 1.21E-23 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 PANTHER PTHR20836 1 222 1.4E-51 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 105 2.3E-16 T 25-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 SUPERFAMILY SSF55347 107 194 2.83E-22 T 25-04-2016 SMD_RS10520 dfd1bec12cc8a91c7622010ed0cc95e2 223 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 108 222 1.3E-33 T 25-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMD_RS03430 2d844ff571c40499d5585bb4763c5452 87 PANTHER PTHR37479:SF1 1 87 1.1E-28 T 25-04-2016 SMD_RS03430 2d844ff571c40499d5585bb4763c5452 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 4.4E-24 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SMD_RS03430 2d844ff571c40499d5585bb4763c5452 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.191 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SMD_RS03430 2d844ff571c40499d5585bb4763c5452 87 PANTHER PTHR37479 1 87 1.1E-28 T 25-04-2016 SMD_RS03430 2d844ff571c40499d5585bb4763c5452 87 Pfam PF04999 Cell division protein FtsL 5 87 5.7E-25 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SMD_RS14980 d45b3541d9dd12050e520cbc8acdfaa2 415 Gene3D G3DSA:1.20.1250.20 233 405 2.5E-13 T 25-04-2016 SMD_RS14980 d45b3541d9dd12050e520cbc8acdfaa2 415 PANTHER PTHR23513 2 415 1.4E-92 T 25-04-2016 SMD_RS14980 d45b3541d9dd12050e520cbc8acdfaa2 415 SUPERFAMILY SSF103473 20 413 3.66E-37 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS14980 d45b3541d9dd12050e520cbc8acdfaa2 415 PANTHER PTHR23513:SF9 2 415 1.4E-92 T 25-04-2016 SMD_RS14980 d45b3541d9dd12050e520cbc8acdfaa2 415 Gene3D G3DSA:1.20.1250.20 9 204 3.1E-16 T 25-04-2016 SMD_RS14980 d45b3541d9dd12050e520cbc8acdfaa2 415 Pfam PF05977 Transmembrane secretion effector 12 400 1.6E-32 T 25-04-2016 IPR010290 Transmembrane secretion effector SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 SUPERFAMILY SSF58104 414 697 6.28E-72 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 499 693 4.6E-61 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 SMART SM00304 394 446 15.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 SMART SM00304 214 266 0.0015 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 170 4.3E-23 T 25-04-2016 IPR024478 4HB MCP domain SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PANTHER PTHR32089 127 248 2.6E-161 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PANTHER PTHR32089 429 697 2.6E-161 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 Pfam PF00672 HAMP domain 196 262 6.4E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 Gene3D G3DSA:1.10.287.950 462 666 1.6E-61 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 SUPERFAMILY SSF158472 214 263 2.62E-6 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PANTHER PTHR32089:SF63 127 248 2.6E-161 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PANTHER PTHR32089:SF63 429 697 2.6E-161 T 25-04-2016 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 210 6.8E-60 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 574 603 6.8E-60 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 6.8E-60 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 622 651 6.8E-60 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 545 572 6.8E-60 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS10700 b623498ceb771f22f6d50ef32b3a2943 749 SMART SM00283 447 694 2.3E-91 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 SUPERFAMILY SSF64153 7 246 7.06E-53 T 25-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 Pfam PF03853 YjeF-related protein N-terminus 31 187 1.7E-39 T 25-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 Gene3D G3DSA:3.40.1190.20 232 487 2.1E-86 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 20.953 T 25-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 493 23.271 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 222 488 1.0E-72 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 SUPERFAMILY SSF53613 226 487 3.08E-73 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 PANTHER PTHR12592:SF0 1 494 8.4E-130 T 25-04-2016 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 Gene3D G3DSA:3.40.50.10260 7 231 1.2E-56 T 25-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 Pfam PF01256 Carbohydrate kinase 247 482 8.8E-62 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 25-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 31 208 4.5E-40 T 25-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 PANTHER PTHR12592 1 494 8.4E-130 T 25-04-2016 SMD_RS15095 c8fd65d9db699631d29709b9bb3b3369 494 PIRSF PIRSF017184 6 493 1.4E-123 T 25-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SMD_RS10115 391ed9fc0fdd1f22b8a4bf736b520a14 94 Pfam PF13828 Domain of unknown function (DUF4190) 11 73 1.3E-22 T 25-04-2016 IPR025241 Domain of unknown function DUF4190 SMD_RS02370 c13c685a89848bcf6afa4ea01da39fed 138 PANTHER PTHR35243:SF12 3 132 3.9E-38 T 25-04-2016 SMD_RS02370 c13c685a89848bcf6afa4ea01da39fed 138 PANTHER PTHR35243 3 132 3.9E-38 T 25-04-2016 SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 SUPERFAMILY SSF54211 239 456 1.52E-31 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PRINTS PR00775 90kDa heat shock protein signature 117 139 3.0E-12 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PRINTS PR00775 90kDa heat shock protein signature 33 55 3.0E-12 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PRINTS PR00775 90kDa heat shock protein signature 168 185 3.0E-12 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PRINTS PR00775 90kDa heat shock protein signature 186 204 3.0E-12 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 SUPERFAMILY SSF55874 12 206 3.64E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 167 5.5E-9 T 25-04-2016 SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 Gene3D G3DSA:3.30.565.10 18 221 7.6E-39 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PANTHER PTHR11528:SF26 1 206 4.8E-93 T 25-04-2016 SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PANTHER PTHR11528 1 206 4.8E-93 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 Pfam PF00183 Hsp90 protein 252 356 3.4E-10 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS06385 1f7967caab5770da9705fa7f3b53da25 619 PIRSF PIRSF002583 4 599 2.8E-98 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMD_RS12480 e4afd2d14476122cd394e7d3ea021ab2 113 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 26 57 5.3E-6 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SMD_RS12480 e4afd2d14476122cd394e7d3ea021ab2 113 SUPERFAMILY SSF143120 22 62 1.57E-6 T 25-04-2016 SMD_RS12480 e4afd2d14476122cd394e7d3ea021ab2 113 Gene3D G3DSA:3.40.1620.10 29 58 1.6E-4 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SMD_RS12480 e4afd2d14476122cd394e7d3ea021ab2 113 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 75 2.3E-8 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SMD_RS18150 6ac957d1dd0e6f618a5341af47506401 195 SUPERFAMILY SSF48613 10 191 1.81E-52 T 25-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SMD_RS18150 6ac957d1dd0e6f618a5341af47506401 195 Pfam PF01126 Heme oxygenase 13 185 3.5E-20 T 25-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 SMD_RS18150 6ac957d1dd0e6f618a5341af47506401 195 Gene3D G3DSA:1.20.910.10 2 194 9.3E-73 T 25-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SMD_RS08770 f92278d7bc3fb7a152802569e3b485cb 117 Pfam PF04977 Septum formation initiator 14 92 8.2E-29 T 25-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SMD_RS08770 f92278d7bc3fb7a152802569e3b485cb 117 PANTHER PTHR37485:SF1 5 109 8.8E-46 T 25-04-2016 SMD_RS08770 f92278d7bc3fb7a152802569e3b485cb 117 PANTHER PTHR37485 5 109 8.8E-46 T 25-04-2016 SMD_RS08770 f92278d7bc3fb7a152802569e3b485cb 117 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 93 35.82 T 25-04-2016 IPR023081 Cell division protein FtsB SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 SUPERFAMILY SSF56935 28 713 3.66E-112 T 25-04-2016 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 Pfam PF00593 TonB dependent receptor 475 711 1.9E-26 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 Gene3D G3DSA:2.40.170.20 173 713 6.4E-104 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 Gene3D G3DSA:2.170.130.10 29 167 4.1E-32 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 PANTHER PTHR32552:SF10 10 713 3.6E-98 T 25-04-2016 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 PANTHER PTHR32552 10 713 3.6E-98 T 25-04-2016 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 713 1.4E-74 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS13875 4eb6318f95914bb0ee087cc57e8aed91 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 158 1.9E-17 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 SMART SM00347 30 130 9.8E-19 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 1.4E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.4E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.4E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 Gene3D G3DSA:1.10.10.10 9 145 2.6E-32 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 SUPERFAMILY SSF46785 10 145 4.21E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 Pfam PF12802 MarR family 40 94 2.8E-10 T 25-04-2016 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 PANTHER PTHR33164:SF16 11 144 2.2E-29 T 25-04-2016 SMD_RS07120 231cc3227760e82ae8b343e4817f5027 147 PANTHER PTHR33164 11 144 2.2E-29 T 25-04-2016 SMD_RS09780 8f48abe7c3ccf715224630fc2b3de15a 212 PIRSF PIRSF006170 3 207 1.1E-42 T 25-04-2016 IPR026039 Uncharacterised protein family UPF0070 SMD_RS09780 8f48abe7c3ccf715224630fc2b3de15a 212 SUPERFAMILY SSF48452 93 185 6.21E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS09780 8f48abe7c3ccf715224630fc2b3de15a 212 PANTHER PTHR38035 4 203 1.7E-31 T 25-04-2016 SMD_RS09780 8f48abe7c3ccf715224630fc2b3de15a 212 Gene3D G3DSA:1.25.40.10 59 182 7.9E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS09780 8f48abe7c3ccf715224630fc2b3de15a 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 200 2.7E-38 T 25-04-2016 IPR018704 Tetratricopeptide repeat-like domain SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 SUPERFAMILY SSF54523 7 136 2.83E-23 T 25-04-2016 SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 3.9E-13 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 Pfam PF00114 Pilin (bacterial filament) 35 136 8.8E-19 T 25-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 9.6E-11 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 Gene3D G3DSA:3.30.700.10 7 135 3.2E-27 T 25-04-2016 SMD_RS17450 d8a331f89e9fcb5d9f6568b7cfd3a5e5 139 PANTHER PTHR30093 1 59 4.1E-17 T 25-04-2016 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PANTHER PTHR11946 3 648 5.8E-215 T 25-04-2016 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PANTHER PTHR11946:SF86 3 648 5.8E-215 T 25-04-2016 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 SUPERFAMILY SSF57770 139 173 1.1E-11 T 25-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Gene3D G3DSA:3.40.50.620 5 141 1.5E-76 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Gene3D G3DSA:3.40.50.620 180 379 1.5E-76 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Pfam PF01588 Putative tRNA binding domain 596 690 3.9E-20 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Gene3D G3DSA:1.10.730.10 380 534 1.6E-38 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 569 692 1.5E-37 T 25-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 SUPERFAMILY SSF47323 388 547 4.14E-41 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 1.6E-23 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 1.6E-23 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 1.6E-23 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 1.6E-23 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 1.6E-23 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.6E-23 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Pfam PF09334 tRNA synthetases class I (M) 6 395 1.0E-146 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 SUPERFAMILY SSF50249 585 692 9.3E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 545 38.12 T 25-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 2.2E-158 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 SUPERFAMILY SSF52374 173 385 3.43E-87 T 25-04-2016 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 SUPERFAMILY SSF52374 4 138 3.43E-87 T 25-04-2016 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Gene3D G3DSA:2.20.28.20 142 173 8.8E-18 T 25-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMD_RS15990 0f381b3ea736afa3e5961d3a73deb4dd 693 Gene3D G3DSA:2.40.50.140 585 692 3.7E-37 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS20230 b01ee7922e236f01cdd49a0ed4d8b308 214 SUPERFAMILY SSF47240 52 187 1.27E-17 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS20230 b01ee7922e236f01cdd49a0ed4d8b308 214 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 14 214 29.303 T 25-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 SMD_RS20230 b01ee7922e236f01cdd49a0ed4d8b308 214 PANTHER PTHR11237:SF3 5 214 5.6E-120 T 25-04-2016 SMD_RS20230 b01ee7922e236f01cdd49a0ed4d8b308 214 PANTHER PTHR11237 5 214 5.6E-120 T 25-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 SMD_RS20230 b01ee7922e236f01cdd49a0ed4d8b308 214 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 54 209 9.6E-36 T 25-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 SMD_RS20230 b01ee7922e236f01cdd49a0ed4d8b308 214 Gene3D G3DSA:1.20.1260.10 59 186 7.2E-11 T 25-04-2016 IPR012347 Ferritin-related SMD_RS20200 aa472da75a5963af1d1a98e21b06e51a 69 PANTHER PTHR37424 2 66 4.8E-16 T 25-04-2016 SMD_RS20200 aa472da75a5963af1d1a98e21b06e51a 69 PANTHER PTHR37424:SF1 2 66 4.8E-16 T 25-04-2016 SMD_RS20200 aa472da75a5963af1d1a98e21b06e51a 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 1.1E-13 T 25-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 PIRSF PIRSF000443 1 370 9.1E-137 T 25-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 SUPERFAMILY SSF53474 13 368 3.52E-89 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 17 367 3.1E-110 T 25-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 Pfam PF00561 alpha/beta hydrolase fold 45 355 2.7E-26 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 369 44.465 T 25-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 Gene3D G3DSA:3.40.50.1820 232 368 1.4E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 Gene3D G3DSA:3.40.50.1820 27 200 1.4E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 PANTHER PTHR32268 9 370 4.6E-156 T 25-04-2016 SMD_RS14845 914179bfa52d4f99d533ee079e58ab41 370 PANTHER PTHR32268:SF11 9 370 4.6E-156 T 25-04-2016 SMD_RS07825 fcc00571e625f44e496f256d9cd30378 165 PANTHER PTHR11717 10 162 6.9E-33 T 25-04-2016 SMD_RS07825 fcc00571e625f44e496f256d9cd30378 165 SMART SM00226 7 145 7.3E-32 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS07825 fcc00571e625f44e496f256d9cd30378 165 PANTHER PTHR11717:SF18 10 162 6.9E-33 T 25-04-2016 SMD_RS07825 fcc00571e625f44e496f256d9cd30378 165 SUPERFAMILY SSF52788 7 145 1.83E-38 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS07825 fcc00571e625f44e496f256d9cd30378 165 Gene3D G3DSA:3.40.50.270 5 143 1.8E-38 T 25-04-2016 SMD_RS07825 fcc00571e625f44e496f256d9cd30378 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 133 5.4E-17 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 Gene3D G3DSA:3.40.50.10490 211 377 2.9E-44 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 Gene3D G3DSA:3.40.50.10490 11 193 1.2E-54 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 PANTHER PTHR32502 14 185 1.8E-102 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 PANTHER PTHR32502 236 382 1.8E-102 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 PANTHER PTHR32502:SF3 14 185 1.8E-102 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 PANTHER PTHR32502:SF3 236 382 1.8E-102 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 SUPERFAMILY SSF53697 22 377 3.51E-43 T 25-04-2016 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 Pfam PF01380 SIS domain 230 353 8.4E-7 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS20790 7dbdf60de3ddc67b3f470b843a098c1b 384 Pfam PF01380 SIS domain 57 191 4.3E-10 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 9.7E-13 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 258 276 9.7E-13 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 9.7E-13 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 55 65 9.7E-13 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 9.7E-13 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 280 2.7E-18 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 Gene3D G3DSA:3.50.50.60 127 223 1.2E-30 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PANTHER PTHR22912:SF159 1 289 1.9E-79 T 25-04-2016 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 Gene3D G3DSA:3.50.50.60 2 126 2.4E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 Gene3D G3DSA:3.50.50.60 247 293 2.4E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 SUPERFAMILY SSF51905 1 289 9.48E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.6E-13 T 25-04-2016 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 2.6E-13 T 25-04-2016 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.6E-13 T 25-04-2016 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.6E-13 T 25-04-2016 SMD_RS21175 fe1eb452d6f60b414c725a90b97bf7aa 301 PANTHER PTHR22912 1 289 1.9E-79 T 25-04-2016 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 Gene3D G3DSA:1.10.10.60 9 63 4.7E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 Pfam PF12833 Helix-turn-helix domain 31 110 5.8E-23 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 SUPERFAMILY SSF46689 61 111 5.38E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 SMART SM00342 25 108 9.9E-26 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 SUPERFAMILY SSF46689 9 58 7.62E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 PANTHER PTHR11019 9 116 1.2E-30 T 25-04-2016 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 Gene3D G3DSA:1.10.10.60 64 113 3.4E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11950 1629813ce256fbb2ac39d3aace9e0782 153 PANTHER PTHR11019:SF105 9 116 1.2E-30 T 25-04-2016 SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 PIRSF PIRSF004553 10 189 1.7E-43 T 25-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 SUPERFAMILY SSF53335 10 186 1.56E-44 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 Pfam PF03602 Conserved hypothetical protein 95 11 185 2.2E-50 T 25-04-2016 SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 PANTHER PTHR18895 2 190 4.0E-44 T 25-04-2016 SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 9 187 2.4E-42 T 25-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 Gene3D G3DSA:3.40.50.150 7 188 1.3E-57 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS09220 37d17dfdc51fe642bc91a91f72d2d90c 192 PANTHER PTHR18895:SF60 2 190 4.0E-44 T 25-04-2016 SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 PANTHER PTHR11695 25 340 1.8E-152 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 SUPERFAMILY SSF50129 6 146 5.39E-37 T 25-04-2016 IPR011032 GroES-like SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 SUPERFAMILY SSF50129 295 339 7.53E-6 T 25-04-2016 IPR011032 GroES-like SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 PANTHER PTHR11695:SF557 25 340 1.8E-152 T 25-04-2016 SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 Pfam PF00107 Zinc-binding dehydrogenase 161 293 7.1E-21 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 SMART SM00829 18 338 4.6E-8 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 SUPERFAMILY SSF51735 127 306 4.3E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 Gene3D G3DSA:3.40.50.720 144 308 2.1E-61 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 Gene3D G3DSA:3.90.180.10 5 143 5.9E-50 T 25-04-2016 IPR011032 GroES-like SMD_RS15150 afd9eadf3c37dccad87a3d060985b14a 341 Pfam PF16884 N-terminal domain of oxidoreductase 9 112 7.8E-38 T 25-04-2016 SMD_RS14015 abf270668ad3770b9ea97f1b7b2114f2 268 Gene3D G3DSA:2.60.200.20 112 208 1.1E-18 T 25-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SMD_RS14015 abf270668ad3770b9ea97f1b7b2114f2 268 SMART SM00240 137 187 7.1E-7 T 25-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SMD_RS14015 abf270668ad3770b9ea97f1b7b2114f2 268 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 125 208 1.7E-14 T 25-04-2016 IPR032030 YscD, cytoplasmic domain SMD_RS14015 abf270668ad3770b9ea97f1b7b2114f2 268 SUPERFAMILY SSF49879 119 209 5.8E-18 T 25-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 Pfam PF13365 Trypsin-like peptidase domain 123 258 8.0E-36 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PANTHER PTHR22939:SF98 97 391 6.2E-151 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PANTHER PTHR22939:SF98 1 74 6.2E-151 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PANTHER PTHR22939 97 391 6.2E-151 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PANTHER PTHR22939 1 74 6.2E-151 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 SUPERFAMILY SSF50156 416 498 6.31E-10 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 Gene3D G3DSA:2.40.10.10 185 298 9.8E-43 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PRINTS PR00834 HtrA/DegQ protease family signature 153 173 1.4E-49 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PRINTS PR00834 HtrA/DegQ protease family signature 132 144 1.4E-49 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 1.4E-49 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PRINTS PR00834 HtrA/DegQ protease family signature 337 349 1.4E-49 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 1.4E-49 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 PRINTS PR00834 HtrA/DegQ protease family signature 193 217 1.4E-49 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 SUPERFAMILY SSF50494 50 289 1.4E-66 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 52 500 2.5E-146 T 25-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 SUPERFAMILY SSF50156 255 380 1.31E-24 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 Pfam PF13180 PDZ domain 298 388 9.5E-16 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 Gene3D G3DSA:2.40.10.10 52 184 3.4E-36 T 25-04-2016 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 SMART SM00228 297 379 3.2E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 SMART SM00228 417 497 1.4 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 Gene3D G3DSA:2.30.42.10 418 507 1.9E-13 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS16245 6e74c743b8a5f40baedc63d7325d64b5 510 Gene3D G3DSA:2.30.42.10 299 395 1.3E-27 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS22050 74c2f50b31bfc55821c5f97ade57fcbb 231 PRINTS PR01994 Antirepressor protein ANT signature 25 46 5.2E-17 T 25-04-2016 IPR018875 Antirepressor protein ANT, N-terminal SMD_RS22050 74c2f50b31bfc55821c5f97ade57fcbb 231 PRINTS PR01994 Antirepressor protein ANT signature 72 95 5.2E-17 T 25-04-2016 IPR018875 Antirepressor protein ANT, N-terminal SMD_RS22050 74c2f50b31bfc55821c5f97ade57fcbb 231 PRINTS PR01994 Antirepressor protein ANT signature 96 118 5.2E-17 T 25-04-2016 IPR018875 Antirepressor protein ANT, N-terminal SMD_RS22050 74c2f50b31bfc55821c5f97ade57fcbb 231 Pfam PF10547 P22_AR N-terminal domain 7 117 6.3E-32 T 25-04-2016 IPR018875 Antirepressor protein ANT, N-terminal SMD_RS05845 da661a501ebbfa240d4e1a859438df6b 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 96 5.2E-17 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS05845 da661a501ebbfa240d4e1a859438df6b 98 SUPERFAMILY SSF46626 4 97 2.58E-24 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS05845 da661a501ebbfa240d4e1a859438df6b 98 Gene3D G3DSA:1.10.760.10 28 97 1.6E-23 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 PANTHER PTHR30504 1 526 0.0 T 25-04-2016 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 533 59.862 T 25-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 44 521 2.3E-196 T 25-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 Gene3D G3DSA:2.70.98.10 43 415 1.9E-166 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 SUPERFAMILY SSF81296 414 524 9.8E-28 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 Gene3D G3DSA:2.60.40.10 416 524 4.9E-35 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 SUPERFAMILY SSF74650 44 414 1.76E-155 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 PANTHER PTHR30504:SF3 1 526 0.0 T 25-04-2016 SMD_RS00335 6e5c9d03186df77a051d26f9eb953b13 534 PIRSF PIRSF006281 1 525 5.1E-207 T 25-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 Pfam PF00654 Voltage gated chloride channel 70 414 1.8E-80 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PANTHER PTHR11689 31 428 3.2E-66 T 25-04-2016 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 SUPERFAMILY SSF81340 6 429 3.66E-90 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PRINTS PR00762 Chloride channel signature 382 401 2.8E-29 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PRINTS PR00762 Chloride channel signature 335 355 2.8E-29 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PRINTS PR00762 Chloride channel signature 82 99 2.8E-29 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PRINTS PR00762 Chloride channel signature 364 380 2.8E-29 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PRINTS PR00762 Chloride channel signature 116 135 2.8E-29 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 PRINTS PR00762 Chloride channel signature 168 187 2.8E-29 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS20835 87bb2bbcf3aae1b284bdf1a9d3a5f97f 446 Gene3D G3DSA:1.10.3080.10 18 427 4.3E-73 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 9 208 24.148 T 25-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 Gene3D G3DSA:3.20.20.70 6 207 1.4E-58 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 Pfam PF02581 Thiamine monophosphate synthase/TENI 11 190 8.6E-52 T 25-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 SUPERFAMILY SSF51391 8 204 6.41E-58 T 25-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 PANTHER PTHR20857 11 201 1.2E-51 T 25-04-2016 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 11 201 4.4E-56 T 25-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMD_RS18020 dd5184ac569fd8a87aeb7701aa68a657 208 PANTHER PTHR20857:SF15 11 201 1.2E-51 T 25-04-2016 SMD_RS19400 cc2830d53ad9962c7173ca4d963d63fc 139 Pfam PF00816 H-NS histone family 13 110 9.8E-20 T 25-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SMD_RS19400 cc2830d53ad9962c7173ca4d963d63fc 139 PANTHER PTHR38097 1 118 1.5E-17 T 25-04-2016 SMD_RS19400 cc2830d53ad9962c7173ca4d963d63fc 139 SUPERFAMILY SSF81273 75 116 1.45E-11 T 25-04-2016 SMD_RS19400 cc2830d53ad9962c7173ca4d963d63fc 139 Gene3D G3DSA:4.10.430.10 76 116 7.8E-15 T 25-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SMD_RS19400 cc2830d53ad9962c7173ca4d963d63fc 139 SMART SM00528 69 116 3.2E-9 T 25-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 Gene3D G3DSA:3.10.25.10 206 301 3.1E-29 T 25-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 25-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 6.3E-26 T 25-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 Pfam PF00551 Formyl transferase 1 176 3.6E-43 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 Gene3D G3DSA:3.40.50.170 1 204 1.4E-71 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 302 6.5E-92 T 25-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.334 T 25-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 SUPERFAMILY SSF53328 1 206 2.22E-63 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 PANTHER PTHR11138 1 303 3.1E-114 T 25-04-2016 SMD_RS19640 1960fcd59feabf978a545e8253a881d9 307 SUPERFAMILY SSF50486 204 302 7.46E-30 T 25-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SMD_RS15880 bc56f2ab2d23dc276a472467b22d2fc0 473 PIRSF PIRSF006060 1 471 3.6E-44 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS15880 bc56f2ab2d23dc276a472467b22d2fc0 473 Pfam PF13520 Amino acid permease 8 413 3.9E-65 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS15880 bc56f2ab2d23dc276a472467b22d2fc0 473 PANTHER PTHR11785 5 465 5.4E-202 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS15880 bc56f2ab2d23dc276a472467b22d2fc0 473 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 472 7.2E-163 T 25-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 SMD_RS15880 bc56f2ab2d23dc276a472467b22d2fc0 473 PANTHER PTHR11785:SF77 5 465 5.4E-202 T 25-04-2016 SMD_RS11645 0acb3cfb19806f2f402d2b2dc2f559a2 252 SUPERFAMILY SSF102588 42 223 9.68E-46 T 25-04-2016 IPR024078 Putative deacetylase LmbE-like domain SMD_RS11645 0acb3cfb19806f2f402d2b2dc2f559a2 252 Gene3D G3DSA:3.40.50.10320 41 232 9.7E-43 T 25-04-2016 IPR024078 Putative deacetylase LmbE-like domain SMD_RS11645 0acb3cfb19806f2f402d2b2dc2f559a2 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 45 169 7.1E-27 T 25-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SMD_RS11645 0acb3cfb19806f2f402d2b2dc2f559a2 252 PANTHER PTHR12993 42 223 2.2E-27 T 25-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SMD_RS11050 3c4b4e7657b9098a27d47eed15e66cf9 270 Gene3D G3DSA:3.90.1200.10 79 199 3.5E-7 T 25-04-2016 SMD_RS11050 3c4b4e7657b9098a27d47eed15e66cf9 270 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 8 250 2.7E-69 T 25-04-2016 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 SMD_RS11050 3c4b4e7657b9098a27d47eed15e66cf9 270 SUPERFAMILY SSF56112 23 250 1.9E-27 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 Gene3D G3DSA:3.30.390.30 342 451 7.3E-41 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 320 1.8E-60 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 Gene3D G3DSA:3.50.50.60 6 141 1.5E-39 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.8E-30 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 1.8E-30 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.8E-30 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.8E-30 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 1.8E-30 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PANTHER PTHR22912:SF106 1 452 1.2E-195 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 446 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 360 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 6.1E-66 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 SUPERFAMILY SSF51905 8 375 1.14E-56 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PANTHER PTHR22912 1 452 1.2E-195 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 SUPERFAMILY SSF55424 340 452 3.95E-32 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 Gene3D G3DSA:3.50.50.60 142 331 8.6E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 PIRSF PIRSF000350 1 451 3.1E-76 T 25-04-2016 SMD_RS15775 012dcd3c46f1667e46f9d0bbd73d57ad 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 451 1.8E-30 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMD_RS05890 3b4399d00565ccfed4502c17ea69f5c3 168 SUPERFAMILY SSF54637 4 135 9.34E-30 T 25-04-2016 IPR029069 HotDog domain SMD_RS05890 3b4399d00565ccfed4502c17ea69f5c3 168 Pfam PF03061 Thioesterase superfamily 52 122 3.5E-8 T 25-04-2016 IPR006683 Thioesterase domain SMD_RS05890 3b4399d00565ccfed4502c17ea69f5c3 168 Gene3D G3DSA:3.10.129.10 3 137 3.3E-33 T 25-04-2016 IPR029069 HotDog domain SMD_RS05890 3b4399d00565ccfed4502c17ea69f5c3 168 PANTHER PTHR12418 23 158 5.0E-20 T 25-04-2016 SMD_RS04025 13676182775ab18185497d62992c4673 205 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 22.842 T 25-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMD_RS04025 13676182775ab18185497d62992c4673 205 Pfam PF01386 Ribosomal L25p family 7 94 1.9E-25 T 25-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMD_RS04025 13676182775ab18185497d62992c4673 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 173 2.1E-37 T 25-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMD_RS04025 13676182775ab18185497d62992c4673 205 SUPERFAMILY SSF50715 4 199 1.45E-53 T 25-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SMD_RS04025 13676182775ab18185497d62992c4673 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 191 28.948 T 25-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMD_RS04025 13676182775ab18185497d62992c4673 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 191 2.8E-25 T 25-04-2016 IPR020057 Ribosomal protein L25, beta domain SMD_RS04025 13676182775ab18185497d62992c4673 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 2.0E-37 T 25-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMD_RS04025 13676182775ab18185497d62992c4673 205 PANTHER PTHR33284 5 205 2.3E-60 T 25-04-2016 SMD_RS04025 13676182775ab18185497d62992c4673 205 Gene3D G3DSA:2.170.120.20 100 200 4.5E-26 T 25-04-2016 IPR020057 Ribosomal protein L25, beta domain SMD_RS04025 13676182775ab18185497d62992c4673 205 Gene3D G3DSA:2.40.240.10 6 97 4.0E-33 T 25-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 SUPERFAMILY SSF54826 1 125 1.5E-33 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 PANTHER PTHR13794 1 355 6.9E-126 T 25-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 PANTHER PTHR13794:SF55 1 355 6.9E-126 T 25-04-2016 SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 Gene3D G3DSA:3.20.20.120 123 353 1.9E-72 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 SUPERFAMILY SSF51604 112 355 4.85E-64 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 Gene3D G3DSA:3.30.390.10 1 122 1.1E-43 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 Pfam PF13378 Enolase C-terminal domain-like 150 355 9.4E-48 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 124 7.1E-20 T 25-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SMD_RS02170 47a01997d9d7e5d183ee5a2143d57ee4 364 SMART SM00922 141 239 4.4E-22 T 25-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SMD_RS21085 e5ffb20b75b07dacaee662e359339c01 175 Pfam PF06718 Protein of unknown function (DUF1203) 40 155 3.7E-31 T 25-04-2016 IPR009593 Protein of unknown function DUF1203 SMD_RS21085 e5ffb20b75b07dacaee662e359339c01 175 PIRSF PIRSF034110 6 156 4.0E-26 T 25-04-2016 IPR009593 Protein of unknown function DUF1203 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 Gene3D G3DSA:1.20.200.10 120 389 5.8E-86 T 25-04-2016 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.6E-48 T 25-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 SUPERFAMILY SSF48557 2 447 9.58E-101 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 5.8E-120 T 25-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 Gene3D G3DSA:1.10.275.10 2 119 8.9E-46 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 PANTHER PTHR11444:SF17 1 455 7.4E-295 T 25-04-2016 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 Pfam PF00206 Lyase 14 312 7.8E-63 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.2E-17 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.2E-17 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.2E-17 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.2E-17 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 Gene3D G3DSA:1.10.40.30 390 445 7.1E-31 T 25-04-2016 SMD_RS14450 c8cb6b46a617c8d5f2bf19798c83f552 455 PANTHER PTHR11444 1 455 7.4E-295 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS12660 a5ec6bb8c26936ece2f539bef21eb9cb 226 Gene3D G3DSA:3.30.1150.10 112 193 6.9E-5 T 25-04-2016 SMD_RS12660 a5ec6bb8c26936ece2f539bef21eb9cb 226 SMART SM00965 59 110 0.0027 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS12660 a5ec6bb8c26936ece2f539bef21eb9cb 226 SUPERFAMILY SSF74653 120 191 3.01E-6 T 25-04-2016 SMD_RS06450 6b68557396760ceaeb72819799727fc4 135 Pfam PF08818 Domain of unknown function (DU1801) 32 125 2.0E-19 T 25-04-2016 IPR014922 Domain of unknown function DUF1801 SMD_RS06450 6b68557396760ceaeb72819799727fc4 135 SUPERFAMILY SSF159888 19 131 3.27E-18 T 25-04-2016 SMD_RS18440 524b5514f007ac8dfb8e3f400b2207fd 239 Pfam PF13489 Methyltransferase domain 64 216 4.2E-11 T 25-04-2016 SMD_RS18440 524b5514f007ac8dfb8e3f400b2207fd 239 Gene3D G3DSA:3.40.50.150 53 231 6.3E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18440 524b5514f007ac8dfb8e3f400b2207fd 239 SUPERFAMILY SSF53335 35 222 1.28E-28 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18440 524b5514f007ac8dfb8e3f400b2207fd 239 PANTHER PTHR10108:SF705 53 216 1.3E-12 T 25-04-2016 SMD_RS18440 524b5514f007ac8dfb8e3f400b2207fd 239 PANTHER PTHR10108 53 216 1.3E-12 T 25-04-2016 SMD_RS15835 6e24aa23ec0c1c465695120d499f7444 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 1.8E-55 T 25-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS15835 6e24aa23ec0c1c465695120d499f7444 455 PANTHER PTHR30624:SF1 13 455 1.2E-165 T 25-04-2016 SMD_RS15835 6e24aa23ec0c1c465695120d499f7444 455 SUPERFAMILY SSF111283 21 454 4.58E-123 T 25-04-2016 SMD_RS15835 6e24aa23ec0c1c465695120d499f7444 455 PANTHER PTHR30624 13 455 1.2E-165 T 25-04-2016 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 SMART SM00382 47 227 5.3E-19 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 Pfam PF00005 ABC transporter 39 177 7.6E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 PANTHER PTHR24220 24 243 5.1E-98 T 25-04-2016 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 PANTHER PTHR24220 259 271 5.1E-98 T 25-04-2016 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 PANTHER PTHR24220:SF454 24 243 5.1E-98 T 25-04-2016 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 PANTHER PTHR24220:SF454 259 271 5.1E-98 T 25-04-2016 SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 SUPERFAMILY SSF52540 22 245 9.09E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11820 c29aa719a4ec90649a63ed99bc098b10 277 Gene3D G3DSA:3.40.50.300 14 226 1.2E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 Gene3D G3DSA:3.20.20.80 126 280 1.4E-23 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 Gene3D G3DSA:3.20.20.80 284 611 7.1E-93 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 PANTHER PTHR32438 126 612 2.6E-84 T 25-04-2016 SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 PANTHER PTHR32438:SF5 126 612 2.6E-84 T 25-04-2016 SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 SUPERFAMILY SSF51445 126 605 6.74E-104 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 Pfam PF02446 4-alpha-glucanotransferase 133 279 1.2E-12 T 25-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SMD_RS12690 6cb64357b37b4eb4ed0bd6f187900ebf 614 Pfam PF02446 4-alpha-glucanotransferase 285 590 4.8E-66 T 25-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SMD_RS06665 baeada5d86b6f7d7fb0bff34248d1601 205 Pfam PF13487 HD domain 87 149 2.3E-17 T 25-04-2016 SMD_RS06665 baeada5d86b6f7d7fb0bff34248d1601 205 SUPERFAMILY SSF109604 25 198 7.71E-35 T 25-04-2016 SMD_RS06665 baeada5d86b6f7d7fb0bff34248d1601 205 Gene3D G3DSA:1.10.3210.10 23 199 4.2E-20 T 25-04-2016 IPR006674 HD domain SMD_RS06665 baeada5d86b6f7d7fb0bff34248d1601 205 SMART SM00471 31 168 3.0E-9 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 Gene3D G3DSA:3.40.630.40 418 494 1.6E-58 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 Gene3D G3DSA:3.40.630.40 273 370 1.6E-58 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 SUPERFAMILY SSF53187 417 493 2.29E-53 T 25-04-2016 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 SUPERFAMILY SSF53187 273 369 2.29E-53 T 25-04-2016 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 PANTHER PTHR30404:SF0 249 520 5.7E-96 T 25-04-2016 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 275 490 4.2E-49 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 Pfam PF11741 AMIN domain 37 113 3.4E-12 T 25-04-2016 IPR021731 AMIN domain SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 SMART SM00646 335 490 6.1E-65 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS15085 590a969c3932c36a74ae3a9590450222 522 PANTHER PTHR30404 249 520 5.7E-96 T 25-04-2016 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 SUPERFAMILY SSF88946 5 81 3.81E-13 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 SUPERFAMILY SSF54427 173 285 1.12E-14 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 PANTHER PTHR30173 7 285 3.0E-89 T 25-04-2016 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 SUPERFAMILY SSF88659 103 162 2.8E-12 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 Pfam PF08281 Sigma-70, region 4 110 161 7.8E-14 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 Gene3D G3DSA:1.10.10.10 108 163 6.8E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 Pfam PF04542 Sigma-70 region 2 7 71 1.9E-15 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 Gene3D G3DSA:3.10.450.50 171 285 4.5E-13 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 PANTHER PTHR30173:SF25 7 285 3.0E-89 T 25-04-2016 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 162 5.2E-17 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 Gene3D G3DSA:1.10.1740.10 4 72 6.2E-14 T 25-04-2016 SMD_RS14595 f37bc4dd914694c62bb2f79411e27ed5 298 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 6 286 1.6E-100 T 25-04-2016 IPR014303 RNA polymerase sigma-70, ECF type SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 SUPERFAMILY SSF52096 23 273 4.07E-74 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 PANTHER PTHR22855 1 536 0.0 T 25-04-2016 SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 Gene3D G3DSA:3.90.226.10 280 531 4.5E-94 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 Gene3D G3DSA:3.90.226.10 35 271 9.6E-81 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-153 T 25-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 PANTHER PTHR22855:SF35 1 536 0.0 T 25-04-2016 SMD_RS01235 83fd0ae408c34be470382ac84f995642 536 SUPERFAMILY SSF52096 237 518 4.27E-89 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 SUPERFAMILY SSF51717 12 279 4.45E-100 T 25-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 PANTHER PTHR20941:SF1 13 283 4.4E-118 T 25-04-2016 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 Pfam PF00809 Pterin binding enzyme 23 263 1.3E-83 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 Gene3D G3DSA:3.20.20.20 17 280 1.8E-107 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 277 1.1E-99 T 25-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SMD_RS08845 6e3572c27ef4932ece79df4d5335d88c 298 PANTHER PTHR20941 13 283 4.4E-118 T 25-04-2016 SMD_RS00610 8c3d530ce98952afa0173ee5c7085faa 205 Gene3D G3DSA:2.40.128.110 42 202 1.3E-26 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS00610 8c3d530ce98952afa0173ee5c7085faa 205 SUPERFAMILY SSF101874 41 200 3.79E-25 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS00610 8c3d530ce98952afa0173ee5c7085faa 205 SMART SM00867 40 200 5.3E-14 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS00610 8c3d530ce98952afa0173ee5c7085faa 205 PANTHER PTHR34406 32 205 5.1E-27 T 25-04-2016 SMD_RS00610 8c3d530ce98952afa0173ee5c7085faa 205 PANTHER PTHR34406:SF1 32 205 5.1E-27 T 25-04-2016 SMD_RS00610 8c3d530ce98952afa0173ee5c7085faa 205 Pfam PF04264 YceI-like domain 42 197 2.0E-17 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 PANTHER PTHR21600 2 231 2.3E-59 T 25-04-2016 SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 PANTHER PTHR21600:SF19 2 231 2.3E-59 T 25-04-2016 SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 Gene3D G3DSA:3.10.290.10 3 55 1.7E-5 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.2E-13 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 SUPERFAMILY SSF55120 61 226 6.88E-36 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS02700 ca4e93498605f7df9dcaa1c1ec6f6c58 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 5.4E-38 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS10960 d4cb68d0a838fa7f5f2d30b3c4e43c76 135 Pfam PF00460 Flagella basal body rod protein 7 34 1.1E-7 T 25-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMD_RS10960 d4cb68d0a838fa7f5f2d30b3c4e43c76 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 2.7E-10 T 25-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMD_RS10960 d4cb68d0a838fa7f5f2d30b3c4e43c76 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 5.3E-42 T 25-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SMD_RS10960 d4cb68d0a838fa7f5f2d30b3c4e43c76 135 PANTHER PTHR30435 1 135 2.3E-52 T 25-04-2016 SMD_RS10960 d4cb68d0a838fa7f5f2d30b3c4e43c76 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 25-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMD_RS10960 d4cb68d0a838fa7f5f2d30b3c4e43c76 135 PANTHER PTHR30435:SF2 1 135 2.3E-52 T 25-04-2016 SMD_RS04980 866aac0a4e776214886d03f797aa62a7 249 SUPERFAMILY SSF56112 41 202 7.28E-21 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS04980 866aac0a4e776214886d03f797aa62a7 249 Gene3D G3DSA:1.10.510.10 157 229 2.5E-11 T 25-04-2016 SMD_RS04980 866aac0a4e776214886d03f797aa62a7 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 1.3E-63 T 25-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 SMD_RS04980 866aac0a4e776214886d03f797aa62a7 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 37.836 T 25-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 Pfam PF05199 GMC oxidoreductase 395 531 1.1E-39 T 25-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 TIGRFAM TIGR01810 betA: choline dehydrogenase 8 541 8.5E-279 T 25-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 SUPERFAMILY SSF54373 297 479 1.37E-62 T 25-04-2016 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 86 109 - T 25-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 Gene3D G3DSA:3.50.50.60 472 537 1.7E-118 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 Gene3D G3DSA:3.50.50.60 194 320 1.7E-118 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 Gene3D G3DSA:3.50.50.60 3 131 1.7E-118 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 Pfam PF00732 GMC oxidoreductase 7 302 4.3E-97 T 25-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 5 558 60.748 T 25-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 25-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 PIRSF PIRSF000137 1 544 5.5E-142 T 25-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 PANTHER PTHR11552 1 557 2.7E-248 T 25-04-2016 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 SUPERFAMILY SSF51905 478 539 1.43E-87 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 SUPERFAMILY SSF51905 4 295 1.43E-87 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS10615 4a3e7e09ce94a3b59764eb4e582c0400 560 PANTHER PTHR11552:SF135 1 557 2.7E-248 T 25-04-2016 SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 PANTHER PTHR30158:SF3 1 393 2.1E-134 T 25-04-2016 SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 Gene3D G3DSA:2.40.50.100 59 92 5.0E-21 T 25-04-2016 SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 Gene3D G3DSA:2.40.50.100 167 201 5.0E-21 T 25-04-2016 SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 366 2.9E-83 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 SUPERFAMILY SSF111369 47 292 2.22E-71 T 25-04-2016 SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 288 1.3E-14 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS14340 81ac4345ea9d27b8670107a102e4dc92 422 PANTHER PTHR30158 1 393 2.1E-134 T 25-04-2016 SMD_RS10380 40f988c298e64a24cf0ae66fd974563b 231 PANTHER PTHR20371 4 231 3.3E-100 T 25-04-2016 SMD_RS10380 40f988c298e64a24cf0ae66fd974563b 231 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 2 229 41.307 T 25-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 SMD_RS10380 40f988c298e64a24cf0ae66fd974563b 231 SUPERFAMILY SSF56784 1 213 2.44E-57 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10380 40f988c298e64a24cf0ae66fd974563b 231 Gene3D G3DSA:3.40.50.1000 1 228 5.5E-22 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10380 40f988c298e64a24cf0ae66fd974563b 231 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 229 4.3E-81 T 25-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 SMD_RS10380 40f988c298e64a24cf0ae66fd974563b 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 196 7.1E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS15040 a533260bd76fa0c63dc91b1f5f86eda6 256 PANTHER PTHR12029 9 187 6.1E-37 T 25-04-2016 SMD_RS15040 a533260bd76fa0c63dc91b1f5f86eda6 256 PIRSF PIRSF004808 6 250 6.7E-71 T 25-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMD_RS15040 a533260bd76fa0c63dc91b1f5f86eda6 256 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 8 244 7.4E-66 T 25-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMD_RS15040 a533260bd76fa0c63dc91b1f5f86eda6 256 Pfam PF00588 SpoU rRNA Methylase family 10 160 5.0E-34 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMD_RS15040 a533260bd76fa0c63dc91b1f5f86eda6 256 SUPERFAMILY SSF75217 8 170 1.05E-35 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS15040 a533260bd76fa0c63dc91b1f5f86eda6 256 Gene3D G3DSA:3.40.1280.10 9 167 3.7E-35 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 PANTHER PTHR30055 1 209 3.6E-26 T 25-04-2016 SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.1E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.1E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 SUPERFAMILY SSF48498 83 187 3.18E-11 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 85 198 7.8E-9 T 25-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.1E-17 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 Gene3D G3DSA:1.10.357.10 1 201 1.3E-39 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS18945 0e1688596fb7f29c61581b2961e546bf 219 SUPERFAMILY SSF46689 2 80 8.72E-19 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 PANTHER PTHR11938 1 205 9.6E-112 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Gene3D G3DSA:1.20.5.480 247 294 3.3E-21 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 PANTHER PTHR11938:SF84 1 205 9.6E-112 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Gene3D G3DSA:3.30.70.20 173 227 3.7E-35 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Gene3D G3DSA:3.30.70.20 28 103 3.7E-35 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 PIRSF PIRSF036298 1 304 7.6E-154 T 25-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 1.4E-21 T 25-04-2016 IPR015246 Formate dehydrogenase, transmembrane SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 1.3E-141 T 25-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Gene3D G3DSA:3.30.70.20 104 137 2.4E-11 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Pfam PF13247 4Fe-4S dicluster domain 92 188 3.6E-24 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 SUPERFAMILY SSF54862 28 290 6.91E-70 T 25-04-2016 SMD_RS17895 c2770f11138e6edf59548ef1d8b187ee 305 Gene3D G3DSA:3.30.70.20 138 172 2.0E-15 T 25-04-2016 SMD_RS05740 2b888240500fbb4ce8fdcd9d9b8db87b 196 SMART SM00860 28 182 0.004 T 25-04-2016 IPR018958 SMI1/KNR4-like domain SMD_RS05740 2b888240500fbb4ce8fdcd9d9b8db87b 196 SUPERFAMILY SSF160631 22 75 1.26E-7 T 25-04-2016 SMD_RS05740 2b888240500fbb4ce8fdcd9d9b8db87b 196 SUPERFAMILY SSF160631 127 189 1.26E-7 T 25-04-2016 SMD_RS05740 2b888240500fbb4ce8fdcd9d9b8db87b 196 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 28 181 4.5E-11 T 25-04-2016 IPR018958 SMI1/KNR4-like domain SMD_RS05740 2b888240500fbb4ce8fdcd9d9b8db87b 196 Gene3D G3DSA:3.40.1580.10 126 186 8.0E-6 T 25-04-2016 IPR018958 SMI1/KNR4-like domain SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 SUPERFAMILY SSF48179 204 301 1.84E-34 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 3.2E-39 T 25-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 SMART SM00984 324 428 6.2E-51 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 PIRSF PIRSF500134 1 446 1.8E-191 T 25-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 SUPERFAMILY SSF51735 1 195 2.37E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 427 1.6E-33 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 PANTHER PTHR11374 1 448 1.1E-258 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 PIRSF PIRSF000124 1 443 1.3E-152 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 Gene3D G3DSA:3.40.50.720 235 447 4.0E-73 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 Gene3D G3DSA:3.40.50.720 1 206 1.0E-79 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 Gene3D G3DSA:1.20.5.100 207 234 4.5E-19 T 25-04-2016 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 PANTHER PTHR11374:SF18 1 448 1.1E-258 T 25-04-2016 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 424 8.2E-142 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.7E-70 T 25-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS14395 569f52fcf67a7834dc3240206623f12e 449 SUPERFAMILY SSF52413 317 439 2.35E-38 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMD_RS04305 edb84aa12305a03e869c0673de03e7a8 707 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS04305 edb84aa12305a03e869c0673de03e7a8 707 SUPERFAMILY SSF56935 23 707 2.4E-82 T 25-04-2016 SMD_RS04305 edb84aa12305a03e869c0673de03e7a8 707 Pfam PF00593 TonB dependent receptor 435 704 2.3E-20 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04305 edb84aa12305a03e869c0673de03e7a8 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 150 2.4E-5 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS04305 edb84aa12305a03e869c0673de03e7a8 707 Gene3D G3DSA:2.40.170.20 154 707 5.8E-62 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04305 edb84aa12305a03e869c0673de03e7a8 707 Gene3D G3DSA:2.170.130.10 27 153 6.9E-8 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 Pfam PF00128 Alpha amylase, catalytic domain 29 377 1.5E-85 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 SUPERFAMILY SSF51445 5 460 3.1E-132 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 Gene3D G3DSA:3.20.20.80 5 105 8.5E-101 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 Gene3D G3DSA:3.20.20.80 177 462 8.5E-101 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 SMART SM00642 14 402 8.0E-113 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 PANTHER PTHR10357:SF11 1 407 9.9E-149 T 25-04-2016 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 PANTHER PTHR10357:SF11 439 532 9.9E-149 T 25-04-2016 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 SUPERFAMILY SSF51011 463 535 4.26E-8 T 25-04-2016 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 Gene3D G3DSA:2.60.40.1180 463 529 4.8E-6 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 Pfam PF11941 Domain of unknown function (DUF3459) 448 532 2.8E-8 T 25-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 Gene3D G3DSA:3.90.400.10 106 176 9.9E-29 T 25-04-2016 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 PANTHER PTHR10357 1 407 9.9E-149 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS05760 c025b766b7ea0605c61e118787c331a1 537 PANTHER PTHR10357 439 532 9.9E-149 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 PANTHER PTHR32182 1 361 6.1E-50 T 25-04-2016 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 SUPERFAMILY SSF52540 1 340 1.08E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00125 472983604698d99341d2540ccd3fff54 364 PANTHER PTHR32182:SF0 1 361 6.1E-50 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 86.231 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 8.4E-80 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SMD_RS00125 472983604698d99341d2540ccd3fff54 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 341 1.2E-16 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SMD_RS00125 472983604698d99341d2540ccd3fff54 364 Gene3D G3DSA:3.40.50.300 1 201 1.8E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00125 472983604698d99341d2540ccd3fff54 364 Gene3D G3DSA:3.40.50.300 236 336 1.8E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08855 8dc779fa6ade3960bce806aecf81eccb 91 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.4E-30 T 25-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SMD_RS08855 8dc779fa6ade3960bce806aecf81eccb 91 Gene3D G3DSA:2.30.30.100 1 69 3.8E-37 T 25-04-2016 SMD_RS08855 8dc779fa6ade3960bce806aecf81eccb 91 SUPERFAMILY SSF50182 7 69 5.01E-24 T 25-04-2016 IPR010920 LSM domain SMD_RS08855 8dc779fa6ade3960bce806aecf81eccb 91 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.333 T 25-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SMD_RS08855 8dc779fa6ade3960bce806aecf81eccb 91 PANTHER PTHR34772 1 91 3.9E-40 T 25-04-2016 SMD_RS08855 8dc779fa6ade3960bce806aecf81eccb 91 PANTHER PTHR34772:SF1 1 91 3.9E-40 T 25-04-2016 SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 171 1.6E-33 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 Gene3D G3DSA:1.10.10.10 84 160 4.2E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 SUPERFAMILY SSF46785 7 82 9.68E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 Gene3D G3DSA:1.10.10.10 6 82 2.3E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 PANTHER PTHR34298:SF2 1 190 1.1E-89 T 25-04-2016 SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 PANTHER PTHR34298 1 190 1.1E-89 T 25-04-2016 SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 SUPERFAMILY SSF46785 85 160 1.73E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14765 915cc4f3971c7c831d354a5508538cef 291 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 169 1.4E-49 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 Pfam PF01084 Ribosomal protein S18 18 68 1.4E-24 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 PANTHER PTHR13479 3 74 3.0E-30 T 25-04-2016 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.026 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 Gene3D G3DSA:4.10.640.10 8 74 7.6E-32 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.5E-17 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.5E-17 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.5E-17 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.5E-17 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.1E-35 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 SUPERFAMILY SSF46911 3 74 1.26E-28 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 4.0E-23 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14240 d579821443c977e1b5f5aa0b37ff2a0f 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 25-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS16885 180f1629774bb348d9a956180325497d 140 SUPERFAMILY SSF52172 10 126 2.28E-24 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS16885 180f1629774bb348d9a956180325497d 140 SMART SM00448 10 120 9.5E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16885 180f1629774bb348d9a956180325497d 140 Gene3D G3DSA:3.40.50.2300 10 126 4.5E-27 T 25-04-2016 SMD_RS16885 180f1629774bb348d9a956180325497d 140 Pfam PF00072 Response regulator receiver domain 12 121 2.6E-16 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16885 180f1629774bb348d9a956180325497d 140 PANTHER PTHR26402 10 125 1.8E-23 T 25-04-2016 SMD_RS13990 ee4644ebf5b85837cf38f6c1b3983e2c 212 Gene3D G3DSA:3.30.1150.10 100 211 2.7E-16 T 25-04-2016 SMD_RS13990 ee4644ebf5b85837cf38f6c1b3983e2c 212 PANTHER PTHR33446 62 210 3.0E-17 T 25-04-2016 SMD_RS13990 ee4644ebf5b85837cf38f6c1b3983e2c 212 SUPERFAMILY SSF74653 98 212 1.96E-24 T 25-04-2016 SMD_RS13990 ee4644ebf5b85837cf38f6c1b3983e2c 212 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 133 210 2.9E-25 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS13990 ee4644ebf5b85837cf38f6c1b3983e2c 212 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 135 211 7.5E-23 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS01700 fc5f12a8aa6447290abd544dbf70375f 178 Pfam PF01292 Prokaryotic cytochrome b561 8 176 6.1E-26 T 25-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMD_RS01700 fc5f12a8aa6447290abd544dbf70375f 178 SUPERFAMILY SSF81342 7 177 7.53E-33 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMD_RS01700 fc5f12a8aa6447290abd544dbf70375f 178 PANTHER PTHR30529:SF1 1 178 1.3E-65 T 25-04-2016 SMD_RS01700 fc5f12a8aa6447290abd544dbf70375f 178 PANTHER PTHR30529 1 178 1.3E-65 T 25-04-2016 SMD_RS03700 13aa9ea3baa6faa2c7d81faf0164ec17 386 SUPERFAMILY SSF103473 4 381 2.09E-51 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS03700 13aa9ea3baa6faa2c7d81faf0164ec17 386 Pfam PF07690 Major Facilitator Superfamily 10 322 5.7E-32 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS03700 13aa9ea3baa6faa2c7d81faf0164ec17 386 Gene3D G3DSA:1.20.1250.20 7 184 4.0E-24 T 25-04-2016 SMD_RS03700 13aa9ea3baa6faa2c7d81faf0164ec17 386 Gene3D G3DSA:1.20.1250.20 200 380 1.7E-13 T 25-04-2016 SMD_RS03700 13aa9ea3baa6faa2c7d81faf0164ec17 386 PANTHER PTHR23501:SF4 1 375 1.4E-133 T 25-04-2016 SMD_RS03700 13aa9ea3baa6faa2c7d81faf0164ec17 386 PANTHER PTHR23501 1 375 1.4E-133 T 25-04-2016 SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.3E-62 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050:SF6 1 251 6.1E-74 T 25-04-2016 SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 84 231 2.2E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050 1 251 6.1E-74 T 25-04-2016 SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 1.8E-74 T 25-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMD_RS19355 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.3E-62 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050:SF6 1 251 6.1E-74 T 25-04-2016 SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 84 231 2.2E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050 1 251 6.1E-74 T 25-04-2016 SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 1.8E-74 T 25-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMD_RS20515 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.3E-62 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050:SF6 1 251 6.1E-74 T 25-04-2016 SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 84 231 2.2E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050 1 251 6.1E-74 T 25-04-2016 SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 1.8E-74 T 25-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMD_RS00705 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.3E-62 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050:SF6 1 251 6.1E-74 T 25-04-2016 SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 84 231 2.2E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050 1 251 6.1E-74 T 25-04-2016 SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 1.8E-74 T 25-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMD_RS02945 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02190 53e4d56010113b02ebad2c1c90e7022d 528 Pfam PF00144 Beta-lactamase 37 374 1.2E-64 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS02190 53e4d56010113b02ebad2c1c90e7022d 528 Gene3D G3DSA:3.40.710.10 46 378 5.6E-78 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS02190 53e4d56010113b02ebad2c1c90e7022d 528 SUPERFAMILY SSF56601 33 377 3.24E-72 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS02190 53e4d56010113b02ebad2c1c90e7022d 528 PANTHER PTHR22935 4 422 1.1E-72 T 25-04-2016 SMD_RS02190 53e4d56010113b02ebad2c1c90e7022d 528 PANTHER PTHR22935:SF68 4 422 1.1E-72 T 25-04-2016 SMD_RS03240 0aac61e9c683a872072747b014aca624 345 Pfam PF00419 Fimbrial protein 192 344 2.5E-17 T 25-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SMD_RS03240 0aac61e9c683a872072747b014aca624 345 PANTHER PTHR33420 187 345 6.8E-23 T 25-04-2016 SMD_RS03240 0aac61e9c683a872072747b014aca624 345 SUPERFAMILY SSF49401 195 345 3.43E-24 T 25-04-2016 IPR008966 Adhesion domain SMD_RS03240 0aac61e9c683a872072747b014aca624 345 Gene3D G3DSA:2.60.40.1090 194 345 1.2E-25 T 25-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 Gene3D G3DSA:3.40.50.740 109 192 1.1E-14 T 25-04-2016 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 Gene3D G3DSA:2.20.25.90 38 108 6.6E-24 T 25-04-2016 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 SMART SM00926 44 105 4.8E-21 T 25-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 Pfam PF00384 Molybdopterin oxidoreductase 108 140 3.1E-5 T 25-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 PANTHER PTHR11615:SF149 46 196 6.6E-91 T 25-04-2016 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 PANTHER PTHR11615 46 196 6.6E-91 T 25-04-2016 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 25-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 104 3.4E-18 T 25-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMD_RS17885 787367a8d94af6aa3437eb9fb8a2c61a 196 SUPERFAMILY SSF53706 37 196 6.15E-53 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF47226 970 1090 5.0E-11 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM00260 1958 2096 3.1E-24 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1644 1779 4.1E-6 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM00073 1462 1559 1.1E-16 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM00073 790 887 5.3E-4 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM00073 973 1065 0.34 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM00448 2119 2232 2.9E-34 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF47226 290 408 1.41E-10 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1950 1963 1.5E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1870 1884 1.5E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1926 1944 1.5E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:2.30.30.40 1965 1987 9.7E-21 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:2.30.30.40 2051 2095 9.7E-21 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PANTHER PTHR22617:SF20 1458 1691 2.0E-232 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PANTHER PTHR22617:SF20 770 938 2.0E-232 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PANTHER PTHR22617:SF20 1758 2112 2.0E-232 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF52172 2121 2240 1.57E-34 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF00072 Response regulator receiver domain 2121 2231 1.6E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF47226 13 133 3.27E-18 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF01627 Hpt domain 973 1069 1.0E-5 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF01627 Hpt domain 793 883 1.3E-13 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF01627 Hpt domain 1464 1557 6.4E-14 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF01627 Hpt domain 13 111 1.9E-7 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM01231 1642 1780 1.5E-11 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF47226 789 900 6.15E-25 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SMART SM00387 1825 1966 1.4E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:1.10.287.560 1644 1677 6.8E-8 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:1.10.287.560 1756 1781 6.8E-8 T 25-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF01584 CheW-like domain 1970 2098 1.8E-20 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PANTHER PTHR22617 1458 1691 2.0E-232 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PANTHER PTHR22617 770 938 2.0E-232 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 PANTHER PTHR22617 1758 2112 2.0E-232 T 25-04-2016 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF47226 1462 1576 2.22E-24 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:1.20.120.160 969 1096 4.0E-11 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:1.20.120.160 1462 1596 2.7E-27 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:1.20.120.160 18 139 2.6E-13 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:1.20.120.160 788 911 3.7E-25 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1829 1965 6.3E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:3.30.565.10 1782 1963 1.7E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF50341 1965 2095 5.1E-24 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 SUPERFAMILY SSF55874 1782 1963 5.37E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS16765 fd541b9c806f7b1553e85619bacb70fe 2243 Gene3D G3DSA:3.40.50.2300 2119 2237 1.3E-36 T 25-04-2016 SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 Pfam PF12697 Alpha/beta hydrolase family 32 243 3.3E-14 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 SUPERFAMILY SSF53474 24 121 1.97E-26 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 SUPERFAMILY SSF53474 162 247 1.97E-26 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 Gene3D G3DSA:3.40.50.1820 27 128 6.9E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 Gene3D G3DSA:3.40.50.1820 188 247 6.9E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 PANTHER PTHR10992 30 251 4.5E-27 T 25-04-2016 SMD_RS05965 8b1d4dd3f86bc7aa45bf5812d5771377 263 PANTHER PTHR10992:SF832 30 251 4.5E-27 T 25-04-2016 SMD_RS13400 b2d72294cdfe81b3f3fe4173c0cc28c4 216 Gene3D G3DSA:1.10.472.60 75 184 2.5E-25 T 25-04-2016 IPR023169 UPF0413, central domain SMD_RS13400 b2d72294cdfe81b3f3fe4173c0cc28c4 216 Gene3D G3DSA:3.40.30.10 16 74 1.1E-5 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13400 b2d72294cdfe81b3f3fe4173c0cc28c4 216 Pfam PF01323 DSBA-like thioredoxin domain 13 210 4.9E-17 T 25-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SMD_RS13400 b2d72294cdfe81b3f3fe4173c0cc28c4 216 PANTHER PTHR13887 4 191 7.7E-16 T 25-04-2016 SMD_RS13400 b2d72294cdfe81b3f3fe4173c0cc28c4 216 SUPERFAMILY SSF52833 13 214 2.64E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS11595 977f74c57cc4f03e85e2eb44b7e1aecd 155 Pfam PF04940 Sensors of blue-light using FAD 4 93 2.1E-26 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS11595 977f74c57cc4f03e85e2eb44b7e1aecd 155 SUPERFAMILY SSF54975 1 109 1.05E-27 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS11595 977f74c57cc4f03e85e2eb44b7e1aecd 155 SMART SM01034 3 95 1.1E-23 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS21855 6d95f4ca6a4fa64baa6ca5295eb8edb6 174 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 7 150 1.3E-47 T 25-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 SMD_RS21855 6d95f4ca6a4fa64baa6ca5295eb8edb6 174 PANTHER PTHR33371 1 149 4.4E-36 T 25-04-2016 SMD_RS21855 6d95f4ca6a4fa64baa6ca5295eb8edb6 174 Pfam PF02470 MlaD protein 40 119 1.6E-21 T 25-04-2016 IPR003399 Mce/MlaD SMD_RS03560 28b669e7f27411f48012fa16987cb9d3 447 SUPERFAMILY SSF47090 231 304 1.36E-17 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS03560 28b669e7f27411f48012fa16987cb9d3 447 Pfam PF01471 Putative peptidoglycan binding domain 241 302 2.7E-17 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS03560 28b669e7f27411f48012fa16987cb9d3 447 Gene3D G3DSA:1.10.101.10 234 310 1.9E-20 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS13485 4c978c174130218d163f533866f1d7ac 300 SUPERFAMILY SSF161111 5 211 4.71E-32 T 25-04-2016 SMD_RS13485 4c978c174130218d163f533866f1d7ac 300 PANTHER PTHR11562:SF17 5 232 8.1E-28 T 25-04-2016 SMD_RS13485 4c978c174130218d163f533866f1d7ac 300 PANTHER PTHR11562 5 232 8.1E-28 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS13485 4c978c174130218d163f533866f1d7ac 300 Pfam PF01545 Cation efflux family 11 209 1.2E-31 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS13485 4c978c174130218d163f533866f1d7ac 300 Gene3D G3DSA:1.20.1510.10 6 208 6.1E-24 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMD_RS13485 4c978c174130218d163f533866f1d7ac 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 7 263 4.8E-25 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS07580 74ec4aee7674d402229de56defa86515 385 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 1.8E-4 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07580 74ec4aee7674d402229de56defa86515 385 Pfam PF16074 Type IV Pilus-assembly protein W 241 380 6.4E-23 T 25-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 SMD_RS07580 74ec4aee7674d402229de56defa86515 385 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 29 1.6E-6 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07580 74ec4aee7674d402229de56defa86515 385 SUPERFAMILY SSF54523 11 126 9.42E-5 T 25-04-2016 SMD_RS07580 74ec4aee7674d402229de56defa86515 385 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 Pfam PF01687 Riboflavin kinase 185 306 1.8E-37 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 PANTHER PTHR22749 1 308 1.1E-127 T 25-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 Gene3D G3DSA:2.40.30.30 181 310 3.5E-40 T 25-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 Gene3D G3DSA:3.40.50.620 15 180 5.0E-58 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 SUPERFAMILY SSF52374 18 176 1.82E-29 T 25-04-2016 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 SMART SM00904 184 307 6.0E-63 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 SUPERFAMILY SSF82114 174 310 5.45E-45 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 PIRSF PIRSF004491 4 313 1.6E-97 T 25-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 Pfam PF06574 FAD synthetase 15 168 1.8E-46 T 25-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 PANTHER PTHR22749:SF0 1 308 1.1E-127 T 25-04-2016 SMD_RS06260 fd2db9e640bdf017986cd416d2e3d3f1 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 3.8E-81 T 25-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 PANTHER PTHR30537 1 312 2.0E-141 T 25-04-2016 SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 PANTHER PTHR30537:SF21 1 312 2.0E-141 T 25-04-2016 SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.9E-14 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 Gene3D G3DSA:1.10.10.10 2 85 9.2E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 SUPERFAMILY SSF53850 91 299 2.71E-42 T 25-04-2016 SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 Pfam PF03466 LysR substrate binding domain 91 295 3.4E-41 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 Gene3D G3DSA:3.40.190.10 96 195 1.3E-23 T 25-04-2016 SMD_RS21900 7626dbe6f354cbc434ad4eda5d19b25e 323 SUPERFAMILY SSF46785 3 113 2.39E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14460 7a2139abf865b366e6a76a37f84f0116 298 PANTHER PTHR13355 18 155 6.3E-34 T 25-04-2016 SMD_RS14460 7a2139abf865b366e6a76a37f84f0116 298 PANTHER PTHR13355:SF8 18 155 6.3E-34 T 25-04-2016 SMD_RS14460 7a2139abf865b366e6a76a37f84f0116 298 Gene3D G3DSA:3.40.630.30 2 139 3.1E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14460 7a2139abf865b366e6a76a37f84f0116 298 Pfam PF13673 Acetyltransferase (GNAT) domain 22 138 4.4E-19 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS14460 7a2139abf865b366e6a76a37f84f0116 298 SUPERFAMILY SSF55729 3 140 3.42E-34 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 PIRSF PIRSF004505 1 155 5.1E-46 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 Gene3D G3DSA:3.40.1280.10 1 155 2.8E-54 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 2.7E-53 T 25-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.536 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 PANTHER PTHR33603 1 155 1.3E-63 T 25-04-2016 SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 4.6E-49 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 SUPERFAMILY SSF75217 1 153 1.57E-48 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS15895 8a3ea6ec7368b8800e731fdd800d4d50 156 PANTHER PTHR33603:SF1 1 155 1.3E-63 T 25-04-2016 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 PANTHER PTHR13847 1 387 6.5E-87 T 25-04-2016 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 Gene3D G3DSA:3.50.50.60 170 251 6.2E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 Gene3D G3DSA:3.50.50.60 20 112 6.2E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 Gene3D G3DSA:3.50.50.60 345 393 6.2E-38 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 SUPERFAMILY SSF51905 345 391 1.62E-36 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 SUPERFAMILY SSF51905 29 252 1.62E-36 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 Pfam PF01266 FAD dependent oxidoreductase 30 382 3.9E-49 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMD_RS20465 fab14ff054c49e1ec33d0d3c5a224a26 402 PANTHER PTHR13847:SF201 1 387 6.5E-87 T 25-04-2016 SMD_RS05680 fe961e6e75d40d202560135a620364a9 180 PANTHER PTHR11019 3 175 1.3E-68 T 25-04-2016 SMD_RS05680 fe961e6e75d40d202560135a620364a9 180 PANTHER PTHR11019:SF115 3 175 1.3E-68 T 25-04-2016 SMD_RS05680 fe961e6e75d40d202560135a620364a9 180 SUPERFAMILY SSF52317 7 178 3.73E-49 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS05680 fe961e6e75d40d202560135a620364a9 180 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 178 6.0E-51 T 25-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 SMD_RS05680 fe961e6e75d40d202560135a620364a9 180 Pfam PF01965 DJ-1/PfpI family 8 176 3.5E-51 T 25-04-2016 IPR002818 DJ-1/PfpI SMD_RS05680 fe961e6e75d40d202560135a620364a9 180 Gene3D G3DSA:3.40.50.880 3 179 1.6E-60 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS16110 18f4e69d41a82bbc4d91506271bf8582 358 PANTHER PTHR33525:SF3 80 282 1.2E-23 T 25-04-2016 SMD_RS16110 18f4e69d41a82bbc4d91506271bf8582 358 PANTHER PTHR33525 80 282 1.2E-23 T 25-04-2016 SMD_RS16110 18f4e69d41a82bbc4d91506271bf8582 358 SUPERFAMILY SSF109604 87 324 2.39E-38 T 25-04-2016 SMD_RS16110 18f4e69d41a82bbc4d91506271bf8582 358 Gene3D G3DSA:1.10.3150.10 86 309 3.9E-36 T 25-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMD_RS16110 18f4e69d41a82bbc4d91506271bf8582 358 Pfam PF08668 HDOD domain 96 282 7.3E-27 T 25-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 Gene3D G3DSA:2.40.50.100 184 216 2.0E-17 T 25-04-2016 SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 Gene3D G3DSA:2.40.50.100 63 95 2.0E-17 T 25-04-2016 SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 PANTHER PTHR30572:SF3 1 388 2.8E-84 T 25-04-2016 SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 272 2.9E-34 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 268 1.9E-15 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 PANTHER PTHR30572 1 388 2.8E-84 T 25-04-2016 SMD_RS13900 db8974f7b5400ef358b9223941ce4b87 396 SUPERFAMILY SSF111369 51 237 1.44E-22 T 25-04-2016 SMD_RS09500 4e9ae9ee42a487ccf641e606c0ff8e93 399 PANTHER PTHR23505 17 392 1.4E-136 T 25-04-2016 SMD_RS09500 4e9ae9ee42a487ccf641e606c0ff8e93 399 Gene3D G3DSA:1.20.1250.20 219 393 6.3E-21 T 25-04-2016 SMD_RS09500 4e9ae9ee42a487ccf641e606c0ff8e93 399 PANTHER PTHR23505:SF8 17 392 1.4E-136 T 25-04-2016 SMD_RS09500 4e9ae9ee42a487ccf641e606c0ff8e93 399 Gene3D G3DSA:1.20.1250.20 19 189 7.5E-22 T 25-04-2016 SMD_RS09500 4e9ae9ee42a487ccf641e606c0ff8e93 399 Pfam PF07690 Major Facilitator Superfamily 24 252 2.6E-22 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS09500 4e9ae9ee42a487ccf641e606c0ff8e93 399 SUPERFAMILY SSF103473 7 395 6.54E-56 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 359 378 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 50 66 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 31 50 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 131 155 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 261 287 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 155 176 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PRINTS PR01806 Virulence factor MviN signature 434 451 1.2E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PIRSF PIRSF002869 1 532 2.6E-139 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206 68 80 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206 429 467 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206 219 406 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206 491 504 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 Pfam PF03023 MviN-like protein 27 488 1.4E-119 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206:SF90 68 80 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206:SF90 429 467 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206:SF90 219 406 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 PANTHER PTHR11206:SF90 491 504 5.3E-84 T 25-04-2016 SMD_RS06255 fecc829857892220786a231dac594e6f 534 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 526 1.0E-117 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.9E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.9E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.9E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.9E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PANTHER PTHR24322:SF386 150 182 4.2E-74 T 25-04-2016 SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PANTHER PTHR24322:SF386 9 134 4.2E-74 T 25-04-2016 SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PANTHER PTHR24322 150 182 4.2E-74 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PANTHER PTHR24322 9 134 4.2E-74 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 Pfam PF00106 short chain dehydrogenase 7 188 2.2E-45 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 SUPERFAMILY SSF51735 6 247 9.49E-62 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 Gene3D G3DSA:3.40.50.720 6 247 1.5E-62 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.2E-10 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.2E-10 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09950 3ecf5a3a9f3e8b7bcad4c90675717ad5 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.2E-10 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS08640 c4546cf91286d49b2374a4dc54a3b969 146 SUPERFAMILY SSF46458 17 123 2.3E-25 T 25-04-2016 IPR009050 Globin-like SMD_RS08640 c4546cf91286d49b2374a4dc54a3b969 146 Pfam PF01152 Bacterial-like globin 19 104 5.1E-7 T 25-04-2016 IPR001486 Truncated hemoglobin GO:0019825 SMD_RS08640 c4546cf91286d49b2374a4dc54a3b969 146 Gene3D G3DSA:1.10.490.10 19 119 5.4E-19 T 25-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Gene3D G3DSA:3.40.50.300 3 154 5.4E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17915 b53bcf04684b561094da523dce405f18 643 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMD_RS17915 b53bcf04684b561094da523dce405f18 643 SUPERFAMILY SSF50465 279 372 3.27E-15 T 25-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMD_RS17915 b53bcf04684b561094da523dce405f18 643 PANTHER PTHR23115:SF129 1 375 2.0E-118 T 25-04-2016 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Gene3D G3DSA:1.10.10.10 576 633 4.0E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Pfam PF09107 Elongation factor SelB, winged helix 589 631 9.3E-18 T 25-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Pfam PF00009 Elongation factor Tu GTP binding domain 2 136 3.5E-27 T 25-04-2016 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 PRINTS PR00315 GTP-binding elongation factor signature 76 87 1.8E-5 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.8E-5 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 PRINTS PR00315 GTP-binding elongation factor signature 60 70 1.8E-5 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Pfam PF09106 Elongation factor SelB, winged helix 449 504 5.8E-13 T 25-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 SUPERFAMILY SSF50447 187 272 1.52E-19 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Gene3D G3DSA:2.40.30.10 187 307 1.5E-26 T 25-04-2016 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 PANTHER PTHR23115 1 375 2.0E-118 T 25-04-2016 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 SUPERFAMILY SSF46785 513 573 2.37E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Gene3D G3DSA:1.10.10.10 438 505 3.8E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17915 b53bcf04684b561094da523dce405f18 643 Gene3D G3DSA:1.10.10.10 515 573 4.9E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17915 b53bcf04684b561094da523dce405f18 643 SUPERFAMILY SSF52540 2 204 3.54E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17915 b53bcf04684b561094da523dce405f18 643 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 632 1.7E-124 T 25-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SMD_RS17915 b53bcf04684b561094da523dce405f18 643 SUPERFAMILY SSF46785 579 633 4.08E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17915 b53bcf04684b561094da523dce405f18 643 SUPERFAMILY SSF46785 439 508 1.28E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 Pfam PF00953 Glycosyl transferase family 4 99 285 2.1E-33 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 PANTHER PTHR22926 2 361 7.5E-179 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 PANTHER PTHR22926:SF5 2 361 7.5E-179 T 25-04-2016 SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.888 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03450 9f1fcdda173784bfcd99df860a15ec69 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 1.9E-131 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS21525 78888b4b5c83b6eef09f3192dffcc877 265 PANTHER PTHR13696:SF52 1 260 1.1E-89 T 25-04-2016 SMD_RS21525 78888b4b5c83b6eef09f3192dffcc877 265 Pfam PF13614 AAA domain 3 177 5.7E-65 T 25-04-2016 IPR025669 AAA domain SMD_RS21525 78888b4b5c83b6eef09f3192dffcc877 265 SUPERFAMILY SSF52540 1 253 2.51E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21525 78888b4b5c83b6eef09f3192dffcc877 265 Gene3D G3DSA:3.40.50.300 3 257 3.1E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21525 78888b4b5c83b6eef09f3192dffcc877 265 PANTHER PTHR13696 1 260 1.1E-89 T 25-04-2016 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 SMART SM00562 3 140 4.1E-84 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.161 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 25-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 SUPERFAMILY SSF54919 1 140 4.71E-56 T 25-04-2016 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 PANTHER PTHR11349 1 140 8.4E-71 T 25-04-2016 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 2.8E-53 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 Gene3D G3DSA:3.30.70.141 1 140 5.6E-57 T 25-04-2016 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.2E-40 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.2E-40 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.2E-40 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.2E-40 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS09760 505a492dcb9af4f4df68b77008e3d642 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.2E-40 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 Pfam PF04333 MlaA lipoprotein 112 303 2.2E-72 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 PANTHER PTHR30035:SF3 107 334 3.3E-91 T 25-04-2016 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 PRINTS PR01805 VacJ lipoprotein signature 113 126 5.8E-24 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 PRINTS PR01805 VacJ lipoprotein signature 130 146 5.8E-24 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 PRINTS PR01805 VacJ lipoprotein signature 181 198 5.8E-24 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 PRINTS PR01805 VacJ lipoprotein signature 217 234 5.8E-24 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SMD_RS21870 3746594828c5808fe34fac49ad5c3f5b 336 PANTHER PTHR30035 107 334 3.3E-91 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 Gene3D G3DSA:3.30.43.10 3 98 6.1E-25 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 Gene3D G3DSA:3.30.465.10 99 219 1.2E-39 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 Gene3D G3DSA:1.10.45.10 418 457 6.9E-18 T 25-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 PANTHER PTHR11748 3 460 6.4E-150 T 25-04-2016 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 SUPERFAMILY SSF55103 227 460 7.85E-64 T 25-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 457 1.6E-68 T 25-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 SUPERFAMILY SSF56176 8 219 1.26E-69 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 PANTHER PTHR11748:SF35 3 460 6.4E-150 T 25-04-2016 SMD_RS03380 678eec5d4380255f56766e73737c979f 461 Pfam PF01565 FAD binding domain 43 182 8.4E-40 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 PANTHER PTHR30004:SF5 1 323 3.6E-166 T 25-04-2016 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 SUPERFAMILY SSF53659 3 322 7.04E-98 T 25-04-2016 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 PANTHER PTHR30004 1 323 3.6E-166 T 25-04-2016 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 319 5.3E-113 T 25-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 Gene3D G3DSA:3.40.718.10 2 322 3.7E-117 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 319 33.737 T 25-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SMD_RS03755 891ec0cda5c0b9c4a4ef7da13a13e339 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 314 2.4E-95 T 25-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 196 101.309 T 25-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 SUPERFAMILY SSF46689 6 81 1.03E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 SUPERFAMILY SSF48498 81 192 6.04E-24 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 Gene3D G3DSA:1.10.357.10 1 193 3.5E-52 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 PANTHER PTHR30055:SF61 1 192 5.8E-90 T 25-04-2016 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 PANTHER PTHR30055 1 192 5.8E-90 T 25-04-2016 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 191 4.2E-74 T 25-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 6.3E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS10625 b74a1a7e2519a3881b2dd5284c578dc1 196 Pfam PF13977 Bacterial transcriptional repressor 83 191 3.5E-36 T 25-04-2016 SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 Pfam PF01645 Conserved region in glutamate synthase 151 468 5.8E-84 T 25-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 SUPERFAMILY SSF51395 6 513 9.94E-141 T 25-04-2016 SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 PANTHER PTHR11938:SF50 153 504 2.2E-87 T 25-04-2016 SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 PANTHER PTHR11938 153 504 2.2E-87 T 25-04-2016 SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 PIRSF PIRSF006429 4 533 2.6E-159 T 25-04-2016 IPR024188 Glutamate synthase large subunit-like protein SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 Gene3D G3DSA:3.20.20.70 45 496 6.4E-122 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS08665 996708fd7b7c77fdb1a198e68d1a37cb 540 PIRSF PIRSF500060 5 525 4.8E-221 T 25-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 SUPERFAMILY SSF50104 2 61 4.39E-9 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Gene3D G3DSA:2.30.30.30 2 61 2.9E-10 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 25-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 41.663 T 25-04-2016 IPR011897 Translation elongation factor P-like, YeiP SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 PANTHER PTHR30053:SF5 2 188 1.0E-104 T 25-04-2016 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 2.4E-85 T 25-04-2016 IPR011897 Translation elongation factor P-like, YeiP SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Gene3D G3DSA:2.40.50.140 130 187 1.1E-21 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 PANTHER PTHR30053 2 188 1.0E-104 T 25-04-2016 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 SMART SM01185 68 123 2.2E-15 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 PIRSF PIRSF005901 1 188 2.8E-60 T 25-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 SMART SM00841 131 186 6.1E-24 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 60 8.7E-13 T 25-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Gene3D G3DSA:2.40.50.140 66 129 2.3E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 SUPERFAMILY SSF50249 131 187 8.0E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 1.6E-13 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 SUPERFAMILY SSF50249 68 128 5.57E-12 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS10460 9d71b9b4761607fc096cc1fbfe82dfc9 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.9E-20 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 283 5.0E-15 T 25-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 Gene3D G3DSA:3.50.50.60 1 104 1.2E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 Gene3D G3DSA:3.50.50.60 198 300 1.2E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 PANTHER PTHR10742 1 409 1.9E-179 T 25-04-2016 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 PANTHER PTHR10742:SF275 1 409 1.9E-179 T 25-04-2016 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 SUPERFAMILY SSF51905 1 297 1.94E-52 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11315 a3f01e615f402632094e713a1db2b6ec 425 SUPERFAMILY SSF51905 377 408 1.94E-52 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS18910 adcb2d8246ec43e9f4bcf408af6e6dd3 150 PANTHER PTHR11079 6 148 1.2E-39 T 25-04-2016 SMD_RS18910 adcb2d8246ec43e9f4bcf408af6e6dd3 150 PANTHER PTHR11079:SF63 6 148 1.2E-39 T 25-04-2016 SMD_RS18910 adcb2d8246ec43e9f4bcf408af6e6dd3 150 SUPERFAMILY SSF53927 6 148 9.7E-35 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMD_RS18910 adcb2d8246ec43e9f4bcf408af6e6dd3 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 102 1.0E-16 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMD_RS18910 adcb2d8246ec43e9f4bcf408af6e6dd3 150 Gene3D G3DSA:3.40.140.10 4 139 4.6E-33 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 Gene3D G3DSA:3.30.565.10 260 402 1.5E-42 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 403 1.2E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 SMART SM00387 296 404 5.1E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PANTHER PTHR24423:SF360 149 181 5.9E-101 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PANTHER PTHR24423:SF360 219 406 5.9E-101 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 Gene3D G3DSA:1.10.287.130 148 179 6.5E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 Gene3D G3DSA:1.10.287.130 222 250 6.5E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 SUPERFAMILY SSF47384 148 188 1.0E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PANTHER PTHR24423:SF360 18 132 5.9E-101 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 SUPERFAMILY SSF55874 251 402 7.6E-44 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PANTHER PTHR24423 149 181 5.9E-101 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PANTHER PTHR24423 18 132 5.9E-101 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PANTHER PTHR24423 219 406 5.9E-101 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 Gene3D G3DSA:3.30.450.20 18 80 6.0E-6 T 25-04-2016 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 250 5.2E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 1.3E-18 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 1.3E-18 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 1.3E-18 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10990 95ddd87c09494e78b7c26f46186c3c91 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 1.3E-18 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS14180 cff44adc51eae47022ff547d75740601 362 Pfam PF07007 Protein of unknown function (DUF1311) 61 148 3.6E-10 T 25-04-2016 IPR009739 Protein of unknown function DUF1311 SMD_RS12930 ffb1c0dcf87ac406b9af0b975da3ae6d 85 SUPERFAMILY SSF47336 11 83 9.42E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS12930 ffb1c0dcf87ac406b9af0b975da3ae6d 85 Pfam PF00550 Phosphopantetheine attachment site 12 72 2.2E-9 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS12930 ffb1c0dcf87ac406b9af0b975da3ae6d 85 Gene3D G3DSA:1.10.1200.10 11 82 3.0E-10 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS06210 463cd45be6b49a9396599d26ca983123 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 25-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SMD_RS06210 463cd45be6b49a9396599d26ca983123 258 Gene3D G3DSA:3.90.226.10 4 253 1.6E-47 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS06210 463cd45be6b49a9396599d26ca983123 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 227 4.2E-40 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS06210 463cd45be6b49a9396599d26ca983123 258 PANTHER PTHR11941:SF45 2 256 6.5E-66 T 25-04-2016 SMD_RS06210 463cd45be6b49a9396599d26ca983123 258 PANTHER PTHR11941 2 256 6.5E-66 T 25-04-2016 SMD_RS06210 463cd45be6b49a9396599d26ca983123 258 SUPERFAMILY SSF52096 9 255 2.2E-50 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 PANTHER PTHR12147:SF16 16 202 5.8E-145 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 PANTHER PTHR12147:SF16 489 550 5.8E-145 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 PANTHER PTHR12147:SF16 244 473 5.8E-145 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 Pfam PF02225 PA domain 129 210 1.2E-6 T 25-04-2016 IPR003137 PA domain SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 SUPERFAMILY SSF53187 283 527 1.17E-62 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 SUPERFAMILY SSF53187 27 73 1.17E-62 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 SUPERFAMILY SSF52025 128 212 1.57E-7 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 Gene3D G3DSA:3.40.630.10 27 90 1.3E-58 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 Gene3D G3DSA:3.40.630.10 298 531 1.3E-58 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 PANTHER PTHR12147 16 202 5.8E-145 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 PANTHER PTHR12147 489 550 5.8E-145 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 PANTHER PTHR12147 244 473 5.8E-145 T 25-04-2016 SMD_RS01635 2c0054a553c668d7298bf38f2e96bba1 550 Pfam PF04389 Peptidase family M28 299 514 7.5E-47 T 25-04-2016 IPR007484 Peptidase M28 SMD_RS00545 dd80a5f0a6a851cf19ac5b8e8d917abc 373 Pfam PF07584 Aerotolerance regulator N-terminal 1 75 3.9E-9 T 25-04-2016 IPR024163 Aerotolerance regulator, N-terminal SMD_RS00545 dd80a5f0a6a851cf19ac5b8e8d917abc 373 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 78 4.9E-21 T 25-04-2016 IPR011933 Double transmembrane domain SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 PANTHER PTHR11911 300 484 6.0E-239 T 25-04-2016 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 PANTHER PTHR11911 1 282 6.0E-239 T 25-04-2016 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 Gene3D G3DSA:3.20.20.70 2 484 1.1E-196 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 SMART SM01240 7 472 0.0 T 25-04-2016 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 485 82.017 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 SMART SM00116 158 206 6.8E-6 T 25-04-2016 IPR000644 CBS domain SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 SMART SM00116 96 144 6.2E-8 T 25-04-2016 IPR000644 CBS domain SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 PIRSF PIRSF000130 1 485 1.4E-200 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 Pfam PF00571 CBS domain 95 139 3.6E-9 T 25-04-2016 IPR000644 CBS domain SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 Pfam PF00571 CBS domain 149 201 7.5E-5 T 25-04-2016 IPR000644 CBS domain SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 472 4.1E-158 T 25-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 25-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 SUPERFAMILY SSF51412 2 90 9.94E-125 T 25-04-2016 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 SUPERFAMILY SSF51412 217 476 9.94E-125 T 25-04-2016 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 SUPERFAMILY SSF54631 94 203 5.05E-27 T 25-04-2016 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 453 1.3E-187 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 PANTHER PTHR11911:SF6 300 484 6.0E-239 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMD_RS09810 403ff26387cf367fd2a2a97b4d1e56f2 485 PANTHER PTHR11911:SF6 1 282 6.0E-239 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 510 8.6E-39 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 PANTHER PTHR10799:SF710 231 508 2.0E-17 T 25-04-2016 SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 PANTHER PTHR10799 231 508 2.0E-17 T 25-04-2016 SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 SMART SM00267 338 512 1.3E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 Gene3D G3DSA:3.30.70.270 354 510 3.8E-49 T 25-04-2016 SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 508 3.6E-39 T 25-04-2016 IPR000160 GGDEF domain SMD_RS20430 9b1d037eea09e3a4c607daedb0eb7cd2 512 SUPERFAMILY SSF55073 357 510 9.42E-43 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS12085 3f7124904a5f638ac9639a62c37b1b10 194 Pfam PF02974 Protease inhibitor Inh 98 189 5.5E-14 T 25-04-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 SMD_RS12085 3f7124904a5f638ac9639a62c37b1b10 194 SUPERFAMILY SSF50882 99 188 1.18E-16 T 25-04-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 SMD_RS17205 b600e68ada82a164c26cf739c92c6842 259 PANTHER PTHR30625 37 254 2.6E-71 T 25-04-2016 SMD_RS17205 b600e68ada82a164c26cf739c92c6842 259 TIGRFAM TIGR02796 tolQ: protein TolQ 38 253 7.5E-85 T 25-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 SMD_RS17205 b600e68ada82a164c26cf739c92c6842 259 PANTHER PTHR30625:SF3 37 254 2.6E-71 T 25-04-2016 SMD_RS17205 b600e68ada82a164c26cf739c92c6842 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 112 241 4.4E-38 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 1.2E-180 T 25-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 Pfam PF00982 Glycosyltransferase family 20 16 453 1.6E-125 T 25-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 PANTHER PTHR10788 1 453 1.3E-188 T 25-04-2016 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 Gene3D G3DSA:3.40.50.2000 240 437 2.5E-73 T 25-04-2016 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 PANTHER PTHR10788:SF6 1 453 1.3E-188 T 25-04-2016 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 Gene3D G3DSA:3.40.50.2000 2 239 1.2E-67 T 25-04-2016 SMD_RS17385 5066d839582a82c6f0551cebeb51455b 454 SUPERFAMILY SSF53756 2 453 4.02E-142 T 25-04-2016 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 SUPERFAMILY SSF57716 368 406 3.71E-6 T 25-04-2016 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 PANTHER PTHR33823 265 407 3.3E-52 T 25-04-2016 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 285 407 28.388 T 25-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 PANTHER PTHR33823:SF2 265 407 3.3E-52 T 25-04-2016 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 289 398 3.2E-42 T 25-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 366 398 7.2E-8 T 25-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SMD_RS14985 f72cc27c28390310f304d4c7da188d75 408 SUPERFAMILY SSF109635 275 367 1.96E-28 T 25-04-2016 SMD_RS03175 8a340f47942c554c7bd7120cec18028d 210 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.411 T 25-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 Gene3D G3DSA:3.90.950.10 1 196 8.3E-79 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 PANTHER PTHR11067 1 198 4.9E-81 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 PANTHER PTHR11067:SF9 1 198 4.9E-81 T 25-04-2016 SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 SUPERFAMILY SSF52972 1 195 1.52E-71 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 Pfam PF01725 Ham1 family 4 192 5.4E-53 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMD_RS17945 39581661fc3fcae65ae2cb1ac92d1811 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 5.7E-59 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMD_RS18345 31b4715f38dea35c26732c87b3531b0d 65 Gene3D G3DSA:2.60.260.40 12 63 3.6E-19 T 25-04-2016 IPR019401 Zinc finger, CHCC-type SMD_RS18345 31b4715f38dea35c26732c87b3531b0d 65 Pfam PF10276 Zinc-finger domain 25 61 6.6E-8 T 25-04-2016 IPR019401 Zinc finger, CHCC-type SMD_RS01520 2079599ebbc16262687220112a668b25 474 SMART SM00387 361 474 2.2E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01520 2079599ebbc16262687220112a668b25 474 SUPERFAMILY SSF47384 242 306 3.34E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01520 2079599ebbc16262687220112a668b25 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 472 3.3E-13 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01520 2079599ebbc16262687220112a668b25 474 Gene3D G3DSA:1.10.287.130 251 307 9.9E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01520 2079599ebbc16262687220112a668b25 474 PANTHER PTHR24423:SF496 201 471 9.9E-87 T 25-04-2016 SMD_RS01520 2079599ebbc16262687220112a668b25 474 PANTHER PTHR24423:SF496 9 17 9.9E-87 T 25-04-2016 SMD_RS01520 2079599ebbc16262687220112a668b25 474 PANTHER PTHR24423 201 471 9.9E-87 T 25-04-2016 SMD_RS01520 2079599ebbc16262687220112a668b25 474 PANTHER PTHR24423 9 17 9.9E-87 T 25-04-2016 SMD_RS01520 2079599ebbc16262687220112a668b25 474 Gene3D G3DSA:3.30.565.10 324 471 2.5E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01520 2079599ebbc16262687220112a668b25 474 SUPERFAMILY SSF55874 324 471 2.36E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01520 2079599ebbc16262687220112a668b25 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 5.7E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01520 2079599ebbc16262687220112a668b25 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 5.7E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01520 2079599ebbc16262687220112a668b25 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 5.7E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 Gene3D G3DSA:1.10.3850.10 802 1019 4.8E-60 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 Gene3D G3DSA:1.10.3850.10 275 496 4.0E-56 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82693 45 125 2.93E-17 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PANTHER PTHR32063:SF24 2 1023 0.0 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82693 554 648 1.99E-5 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 Gene3D G3DSA:3.30.2090.10 712 796 1.7E-18 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 Gene3D G3DSA:3.30.2090.10 182 261 4.6E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82714 182 261 2.22E-11 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82866 797 1021 6.54E-53 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PANTHER PTHR32063 2 1023 0.0 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82693 267 324 2.44E-17 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82693 137 180 2.44E-17 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82714 712 795 7.98E-19 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.9E-31 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 Gene3D G3DSA:3.30.70.1430 45 139 4.2E-19 T 25-04-2016 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1022 0.0 T 25-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 Pfam PF00873 AcrB/AcrD/AcrF family 6 1017 1.1E-268 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS12425 9ec7f5087fd885f5f3c1624359e12b8e 1025 SUPERFAMILY SSF82866 289 495 1.31E-36 T 25-04-2016 SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 PANTHER PTHR30625:SF3 137 583 3.0E-142 T 25-04-2016 SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 Pfam PF01618 MotA/TolQ/ExbB proton channel family 451 568 1.6E-27 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 Gene3D G3DSA:2.60.120.200 203 335 1.2E-14 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 Pfam PF10102 Domain of unknown function (DUF2341) 76 155 1.4E-18 T 25-04-2016 IPR018765 Domain of unknown function DUF2341 SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 SMART SM00560 204 330 7.3E-4 T 25-04-2016 IPR006558 LamG-like jellyroll fold SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 PANTHER PTHR30625 137 583 3.0E-142 T 25-04-2016 SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 SUPERFAMILY SSF49899 139 330 7.81E-21 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SMD_RS12560 cc46098b44f84d35280ca2095204a26c 594 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 202 328 7.2E-18 T 25-04-2016 SMD_RS06040 4f13bb81500e01725337435945a2f30d 106 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 20 99 1.1E-25 T 25-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein SMD_RS06040 4f13bb81500e01725337435945a2f30d 106 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 99 1.1E-35 T 25-04-2016 IPR009662 Malonate decarboxylase delta subunit SMD_RS06040 4f13bb81500e01725337435945a2f30d 106 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 99 2.0E-32 T 25-04-2016 IPR009662 Malonate decarboxylase delta subunit SMD_RS06040 4f13bb81500e01725337435945a2f30d 106 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 104 51.958 T 25-04-2016 IPR009662 Malonate decarboxylase delta subunit SMD_RS19265 606c2c96c148de9e5fe3658e95ee32de 128 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 10 122 4.0E-33 T 25-04-2016 SMD_RS19265 606c2c96c148de9e5fe3658e95ee32de 128 Pfam PF10947 Protein of unknown function (DUF2628) 12 113 2.3E-16 T 25-04-2016 IPR024399 Protein of unknown function DUF2628 SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 SUPERFAMILY SSF53335 214 261 1.44E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 SUPERFAMILY SSF53335 36 169 1.44E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 Pfam PF08241 Methyltransferase domain 65 160 4.7E-14 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 Gene3D G3DSA:3.40.50.150 53 257 3.9E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 PANTHER PTHR10108:SF330 53 188 5.3E-63 T 25-04-2016 SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 PANTHER PTHR10108:SF330 216 262 5.3E-63 T 25-04-2016 SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 PANTHER PTHR10108 53 188 5.3E-63 T 25-04-2016 SMD_RS02740 c39e4c56735b6c6d4dbc062a0e304888 263 PANTHER PTHR10108 216 262 5.3E-63 T 25-04-2016 SMD_RS09910 ada40734a9995d5ee23adf388f1d43dd 139 SUPERFAMILY SSF46955 5 52 6.23E-5 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS09910 ada40734a9995d5ee23adf388f1d43dd 139 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 49 2.8E-13 T 25-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 SMD_RS09910 ada40734a9995d5ee23adf388f1d43dd 139 Pfam PF12728 Helix-turn-helix domain 5 50 4.4E-12 T 25-04-2016 SMD_RS21865 e99c66ed4cdae0a467a02dea2ef150de 103 Gene3D G3DSA:3.30.750.24 13 96 3.2E-9 T 25-04-2016 IPR002645 STAS domain SMD_RS21865 e99c66ed4cdae0a467a02dea2ef150de 103 PANTHER PTHR35849 1 102 3.1E-24 T 25-04-2016 SMD_RS21865 e99c66ed4cdae0a467a02dea2ef150de 103 PANTHER PTHR35849:SF1 1 102 3.1E-24 T 25-04-2016 SMD_RS21865 e99c66ed4cdae0a467a02dea2ef150de 103 SUPERFAMILY SSF52091 13 94 1.1E-11 T 25-04-2016 IPR002645 STAS domain SMD_RS21865 e99c66ed4cdae0a467a02dea2ef150de 103 Pfam PF13466 STAS domain 14 91 3.0E-17 T 25-04-2016 IPR002645 STAS domain SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 SUPERFAMILY SSF50685 37 248 9.77E-60 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 Pfam PF03562 MltA specific insert domain 58 248 1.9E-60 T 25-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 SMART SM00925 131 248 9.5E-37 T 25-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 PANTHER PTHR30124:SF0 49 248 1.6E-56 T 25-04-2016 SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 PANTHER PTHR30124 49 248 1.6E-56 T 25-04-2016 SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 Gene3D G3DSA:2.40.40.10 197 248 1.9E-10 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMD_RS00700 1cbdbe8e7c7248785962c639f3a526a5 248 Gene3D G3DSA:2.40.40.10 44 190 2.7E-31 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 SUPERFAMILY SSF48557 8 511 1.26E-163 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 PANTHER PTHR10362 16 511 2.1E-173 T 25-04-2016 SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 146 162 - T 25-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 Gene3D G3DSA:1.10.275.10 8 204 5.9E-63 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 PANTHER PTHR10362:SF7 16 511 2.1E-173 T 25-04-2016 SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 Pfam PF00221 Aromatic amino acid lyase 16 466 5.3E-158 T 25-04-2016 IPR001106 Aromatic amino acid lyase SMD_RS21280 c332d66652dbf3bae8af333c1d112c5a 516 Gene3D G3DSA:1.20.200.10 205 509 9.3E-94 T 25-04-2016 SMD_RS20395 efc78751294bca29c2f32e65a4058649 360 Pfam PF00676 Dehydrogenase E1 component 41 326 6.2E-70 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SMD_RS20395 efc78751294bca29c2f32e65a4058649 360 PANTHER PTHR11516 9 360 5.1E-124 T 25-04-2016 SMD_RS20395 efc78751294bca29c2f32e65a4058649 360 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 11 351 5.4E-128 T 25-04-2016 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SMD_RS20395 efc78751294bca29c2f32e65a4058649 360 SUPERFAMILY SSF52518 9 353 4.79E-89 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS20395 efc78751294bca29c2f32e65a4058649 360 Gene3D G3DSA:3.40.50.970 6 351 1.1E-113 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS20395 efc78751294bca29c2f32e65a4058649 360 PANTHER PTHR11516:SF1 9 360 5.1E-124 T 25-04-2016 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 Gene3D G3DSA:1.10.10.10 136 238 1.2E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 Gene3D G3DSA:3.40.50.2300 5 129 4.1E-41 T 25-04-2016 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 SMART SM00448 5 117 1.0E-42 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 PANTHER PTHR26402:SF528 5 240 1.7E-95 T 25-04-2016 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 235 6.3E-20 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 SUPERFAMILY SSF52172 5 135 1.2E-41 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 SMART SM00862 159 235 2.9E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 SUPERFAMILY SSF46894 136 236 3.68E-23 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 PANTHER PTHR26402 5 240 1.7E-95 T 25-04-2016 SMD_RS05975 607065e51126cf45d5d2381c818b0200 246 Pfam PF00072 Response regulator receiver domain 7 118 5.4E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02955 4441663491d3f709d7ddcdf4c95cc4e4 121 SUPERFAMILY SSF53098 73 118 2.17E-6 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS02955 4441663491d3f709d7ddcdf4c95cc4e4 121 PANTHER PTHR24559:SF185 9 121 1.0E-40 T 25-04-2016 SMD_RS02955 4441663491d3f709d7ddcdf4c95cc4e4 121 Gene3D G3DSA:3.30.420.10 75 117 6.1E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS02955 4441663491d3f709d7ddcdf4c95cc4e4 121 PANTHER PTHR24559 9 121 1.0E-40 T 25-04-2016 SMD_RS02955 4441663491d3f709d7ddcdf4c95cc4e4 121 Pfam PF13276 HTH-like domain 21 64 1.2E-11 T 25-04-2016 IPR025948 HTH-like domain SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 ProSitePatterns PS00194 Thioredoxin family active site. 161 179 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 SUPERFAMILY SSF52833 104 265 1.53E-31 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 PANTHER PTHR10438:SF244 97 196 5.0E-21 T 25-04-2016 SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 PANTHER PTHR10438:SF244 220 266 5.0E-21 T 25-04-2016 SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 Gene3D G3DSA:3.40.30.10 130 266 1.8E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 Gene3D G3DSA:3.40.30.10 12 33 1.8E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 PANTHER PTHR10438 97 196 5.0E-21 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 PANTHER PTHR10438 220 266 5.0E-21 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS13510 fb309b4e58619d9192ae22011f37d253 267 Pfam PF08534 Redoxin 135 254 4.8E-16 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMD_RS05800 c3c325abf0a56ee4e56a0b2c409755de 1194 Pfam PF12679 ABC-2 family transporter protein 8 198 4.9E-10 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SMD_RS05800 c3c325abf0a56ee4e56a0b2c409755de 1194 SUPERFAMILY SSF55486 845 1076 4.15E-20 T 25-04-2016 SMD_RS05800 c3c325abf0a56ee4e56a0b2c409755de 1194 Pfam PF01433 Peptidase family M1 789 981 4.7E-11 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMD_RS05800 c3c325abf0a56ee4e56a0b2c409755de 1194 Gene3D G3DSA:1.10.390.10 955 1078 4.4E-8 T 25-04-2016 SMD_RS14365 f631df12b061e52484970e2d51182585 363 PANTHER PTHR21091:SF111 70 356 1.7E-201 T 25-04-2016 SMD_RS14365 f631df12b061e52484970e2d51182585 363 PANTHER PTHR21091:SF111 10 41 1.7E-201 T 25-04-2016 SMD_RS14365 f631df12b061e52484970e2d51182585 363 Pfam PF02574 Homocysteine S-methyltransferase 24 347 9.7E-94 T 25-04-2016 IPR003726 Homocysteine-binding domain SMD_RS14365 f631df12b061e52484970e2d51182585 363 Gene3D G3DSA:3.20.20.330 12 361 6.6E-119 T 25-04-2016 IPR003726 Homocysteine-binding domain SMD_RS14365 f631df12b061e52484970e2d51182585 363 PANTHER PTHR21091 70 356 1.7E-201 T 25-04-2016 SMD_RS14365 f631df12b061e52484970e2d51182585 363 PANTHER PTHR21091 10 41 1.7E-201 T 25-04-2016 SMD_RS14365 f631df12b061e52484970e2d51182585 363 SUPERFAMILY SSF82282 14 43 1.44E-102 T 25-04-2016 IPR003726 Homocysteine-binding domain SMD_RS14365 f631df12b061e52484970e2d51182585 363 SUPERFAMILY SSF82282 73 358 1.44E-102 T 25-04-2016 IPR003726 Homocysteine-binding domain SMD_RS10900 1b2c8110454601b46e80889926babf55 392 Pfam PF00700 Bacterial flagellin C-terminal helical region 307 391 7.9E-28 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PANTHER PTHR30244:SF1 218 392 5.4E-125 T 25-04-2016 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PANTHER PTHR30244:SF1 2 177 5.4E-125 T 25-04-2016 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 9.2E-41 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 SUPERFAMILY SSF64518 1 392 1.44E-101 T 25-04-2016 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 Gene3D G3DSA:1.20.1330.10 294 348 5.3E-56 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 Gene3D G3DSA:1.20.1330.10 56 172 5.3E-56 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PANTHER PTHR30244 218 392 5.4E-125 T 25-04-2016 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PANTHER PTHR30244 2 177 5.4E-125 T 25-04-2016 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PRINTS PR00207 Flagellin signature 76 95 1.2E-26 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PRINTS PR00207 Flagellin signature 37 54 1.2E-26 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10900 1b2c8110454601b46e80889926babf55 392 PRINTS PR00207 Flagellin signature 111 134 1.2E-26 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 Pfam PF13633 Prokaryotic N-terminal methylation site 6 31 2.1E-11 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 SUPERFAMILY SSF54523 98 190 3.77E-5 T 25-04-2016 SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 PANTHER PTHR39583 1 203 1.4E-19 T 25-04-2016 SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 SUPERFAMILY SSF54523 8 82 2.28E-8 T 25-04-2016 SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 5.1E-7 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12590 abf5a3f5611f80dab3d1df709e0d8c5f 204 PANTHER PTHR39583:SF1 1 203 1.4E-19 T 25-04-2016 SMD_RS05595 72b2612bd12afdb94cba903ac009836d 172 Pfam PF10029 Predicted periplasmic protein (DUF2271) 23 164 1.7E-52 T 25-04-2016 IPR014469 Protein of unknown function DUF2271 SMD_RS05595 72b2612bd12afdb94cba903ac009836d 172 PIRSF PIRSF014995 1 172 2.7E-71 T 25-04-2016 IPR014469 Protein of unknown function DUF2271 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 SMART SM00283 414 675 9.3E-87 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 PANTHER PTHR32089 351 678 2.0E-136 T 25-04-2016 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 SUPERFAMILY SSF58104 376 676 7.19E-68 T 25-04-2016 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 468 674 1.1E-46 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 Gene3D G3DSA:1.10.287.950 429 646 9.8E-52 T 25-04-2016 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 PANTHER PTHR32089:SF43 351 678 2.0E-136 T 25-04-2016 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 7.6E-18 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 539 7.6E-18 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 7.6E-18 T 25-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMD_RS16770 f56c41255661fb4e12355593e88f5d98 678 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 184 268 1.3E-5 T 25-04-2016 IPR029095 NarX-like, N-terminal SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 PANTHER PTHR26402:SF578 1 222 1.3E-77 T 25-04-2016 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 SMART SM00448 1 112 7.3E-32 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 Gene3D G3DSA:3.40.50.2300 1 120 6.0E-31 T 25-04-2016 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 SMART SM00862 145 220 2.3E-20 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 SUPERFAMILY SSF52172 1 118 3.27E-33 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 6.1E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 Pfam PF00072 Response regulator receiver domain 3 113 5.6E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 SUPERFAMILY SSF46894 120 221 1.36E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 PANTHER PTHR26402 1 222 1.3E-77 T 25-04-2016 SMD_RS13885 7100b378df8a3e8e8e397a871b036ee5 224 Gene3D G3DSA:1.10.10.10 127 222 7.8E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 48 1042 1.2E-231 T 25-04-2016 IPR010104 Bacterial TonB-dependent receptor SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 298 337 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 681 805 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 377 422 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 190 264 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 496 530 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 576 577 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 611 645 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.40.170.20 873 1042 1.6E-56 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 185 3.4E-16 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 SUPERFAMILY SSF56935 299 433 2.89E-87 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 SUPERFAMILY SSF56935 42 255 2.89E-87 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 SUPERFAMILY SSF56935 583 787 2.89E-87 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 SUPERFAMILY SSF56935 476 535 2.89E-87 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 SUPERFAMILY SSF56935 879 1042 2.89E-87 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 PANTHER PTHR40980:SF2 863 1042 0.0 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 PANTHER PTHR40980:SF2 8 804 0.0 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 PANTHER PTHR40980 863 1042 0.0 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 PANTHER PTHR40980 8 804 0.0 T 25-04-2016 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Gene3D G3DSA:2.170.130.10 68 189 5.4E-20 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS11790 df0ca9da2482b635020ad34105274319 1042 Pfam PF00593 TonB dependent receptor 688 1041 5.3E-33 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Pfam PF13087 AAA domain 992 1122 3.4E-9 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887 423 454 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887 264 307 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 SUPERFAMILY SSF52540 817 890 1.83E-27 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 SUPERFAMILY SSF52540 426 451 1.83E-27 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 SUPERFAMILY SSF52540 335 386 1.83E-27 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 SUPERFAMILY SSF52540 929 1123 1.83E-27 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887 710 877 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887 907 1125 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887 324 393 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887:SF350 907 1125 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Gene3D G3DSA:3.40.50.300 423 491 1.5E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Gene3D G3DSA:3.40.50.300 929 957 1.5E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Gene3D G3DSA:3.40.50.300 331 387 1.5E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Gene3D G3DSA:3.40.50.300 838 893 1.5E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887:SF350 423 454 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887:SF350 710 877 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887:SF350 264 307 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 PANTHER PTHR10887:SF350 324 393 3.1E-100 T 25-04-2016 SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Gene3D G3DSA:3.40.50.300 1057 1122 4.4E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11280 4af15d8b37af338dffca7468e76ce28f 1159 Pfam PF13086 AAA domain 797 877 1.6E-6 T 25-04-2016 SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 PANTHER PTHR30173 4 163 1.6E-14 T 25-04-2016 SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 SUPERFAMILY SSF88946 6 85 1.53E-6 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 160 1.0E-12 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 Gene3D G3DSA:1.10.10.10 100 160 3.3E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 SUPERFAMILY SSF88659 99 160 3.27E-11 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 Gene3D G3DSA:1.10.1740.10 7 99 1.9E-5 T 25-04-2016 SMD_RS12515 21a4844245c7028e1b10438fc71e188b 167 Pfam PF08281 Sigma-70, region 4 106 154 4.9E-12 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856 451 753 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856 1075 1169 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856 772 959 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856 346 422 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856 1224 1384 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856 6 235 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 6.6E-27 T 25-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:3.90.1110.10 158 235 2.0E-62 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:3.90.1110.10 352 472 2.0E-62 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:2.30.150.10 620 684 6.7E-25 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 25-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF04563 RNA polymerase beta subunit 28 527 2.6E-40 T 25-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 450 482 3.7E-5 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 9.1E-8 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 362 420 4.1E-5 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF00562 RNA polymerase Rpb2, domain 6 746 1306 3.6E-158 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 1.7E-29 T 25-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856:SF20 451 753 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856:SF20 1075 1169 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856:SF20 772 959 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856:SF20 346 422 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856:SF20 1224 1384 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 PANTHER PTHR20856:SF20 6 235 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:2.40.270.10 822 849 2.3E-87 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:2.40.270.10 1101 1284 2.3E-87 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:2.40.50.150 857 966 2.1E-56 T 25-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:2.40.50.150 1086 1100 2.1E-56 T 25-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:2.40.50.100 743 821 5.3E-29 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:3.90.1100.10 687 741 1.1E-146 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:3.90.1100.10 21 156 1.1E-146 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Gene3D G3DSA:3.90.1100.10 473 619 1.1E-146 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 8.8E-22 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 SUPERFAMILY SSF64484 1080 1382 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 SUPERFAMILY SSF64484 13 231 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 SUPERFAMILY SSF64484 349 968 0.0 T 25-04-2016 SMD_RS04135 ec528b70d5f5c2e52394eca0b578e62b 1384 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1384 12.299 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS17940 8bc950aa281f26c595dc5def5ab77ced 129 Gene3D G3DSA:3.10.180.10 1 128 5.1E-22 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS17940 8bc950aa281f26c595dc5def5ab77ced 129 PANTHER PTHR36437 1 129 3.4E-52 T 25-04-2016 SMD_RS17940 8bc950aa281f26c595dc5def5ab77ced 129 PANTHER PTHR36437:SF2 1 129 3.4E-52 T 25-04-2016 SMD_RS17940 8bc950aa281f26c595dc5def5ab77ced 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.7E-14 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS17940 8bc950aa281f26c595dc5def5ab77ced 129 SUPERFAMILY SSF54593 1 127 3.76E-25 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS00970 cf7182589a799a68b7af123e4aa2104d 122 SUPERFAMILY SSF54593 11 121 1.48E-22 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS00970 cf7182589a799a68b7af123e4aa2104d 122 PANTHER PTHR33993 8 120 1.3E-47 T 25-04-2016 SMD_RS00970 cf7182589a799a68b7af123e4aa2104d 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 116 1.2E-7 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS00970 cf7182589a799a68b7af123e4aa2104d 122 Gene3D G3DSA:3.10.180.10 14 119 4.6E-24 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS00970 cf7182589a799a68b7af123e4aa2104d 122 PANTHER PTHR33993:SF1 8 120 1.3E-47 T 25-04-2016 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 PANTHER PTHR11808:SF12 1 239 7.9E-231 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 PANTHER PTHR11808:SF12 269 414 7.9E-231 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 PANTHER PTHR11808 1 239 7.9E-231 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 PANTHER PTHR11808 269 414 7.9E-231 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 Gene3D G3DSA:3.40.640.10 7 290 1.3E-121 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 414 1.5E-190 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 414 2.7E-133 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 Gene3D G3DSA:3.90.1150.10 292 414 3.5E-41 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 SUPERFAMILY SSF53383 7 414 8.38E-123 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS17310 a6b7639414037967f5ee7c0847878f64 417 PIRSF PIRSF001434 1 415 1.5E-125 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS13785 35755053fb980079853801099049c9bf 417 Pfam PF03743 Bacterial conjugation TrbI-like protein 228 409 3.6E-44 T 25-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 PANTHER PTHR11695:SF281 287 387 6.3E-163 T 25-04-2016 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 PANTHER PTHR11695:SF281 12 106 6.3E-163 T 25-04-2016 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 PANTHER PTHR11695:SF281 127 265 6.3E-163 T 25-04-2016 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 PANTHER PTHR11695 287 387 6.3E-163 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 PANTHER PTHR11695 12 106 6.3E-163 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 PANTHER PTHR11695 127 265 6.3E-163 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 Gene3D G3DSA:3.90.180.10 137 186 1.6E-37 T 25-04-2016 IPR011032 GroES-like SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 Gene3D G3DSA:3.90.180.10 1 88 1.6E-37 T 25-04-2016 IPR011032 GroES-like SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 SUPERFAMILY SSF51735 164 349 3.36E-59 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 1.8E-11 T 25-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 152 3.5E-28 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 Pfam PF00107 Zinc-binding dehydrogenase 197 280 1.4E-8 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 Gene3D G3DSA:3.40.50.720 187 344 2.8E-59 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS11660 03c54004e61abc9aada690151a9c1ad8 387 SUPERFAMILY SSF50129 1 186 1.17E-57 T 25-04-2016 IPR011032 GroES-like SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Gene3D G3DSA:3.30.70.100 15 78 2.6E-23 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Gene3D G3DSA:2.70.150.10 270 409 6.2E-35 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 512 518 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 723 2.4E-43 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 17 78 6.0E-12 T 25-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 84 143 1.2E-9 T 25-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF81665 271 312 2.75E-13 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF81665 409 504 2.75E-13 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF81665 758 797 2.75E-13 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Pfam PF00403 Heavy-metal-associated domain 85 142 1.2E-18 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Pfam PF00403 Heavy-metal-associated domain 18 77 5.8E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF55008 81 147 9.42E-22 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF55008 11 78 1.31E-18 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 787 7.2E-93 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Gene3D G3DSA:3.40.50.1000 637 777 1.1E-57 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Gene3D G3DSA:3.40.50.1000 481 524 1.1E-57 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Pfam PF00122 E1-E2 ATPase 279 501 1.2E-67 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF81653 312 408 7.98E-30 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PANTHER PTHR24093 14 824 1.0E-272 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Gene3D G3DSA:3.40.1110.10 525 636 1.3E-21 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 740 765 2.1E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 681 697 2.1E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 709 725 2.1E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 587 605 2.1E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF56784 567 816 1.6E-59 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 SUPERFAMILY SSF56784 508 528 1.6E-59 T 25-04-2016 IPR023214 HAD-like domain SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 524 3.0E-28 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 728 3.0E-28 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 744 3.0E-28 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 3.0E-28 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 645 3.0E-28 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 666 3.0E-28 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 Gene3D G3DSA:3.30.70.100 82 147 8.6E-26 T 25-04-2016 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 241 818 5.7E-189 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS10330 bedf95dabb2bd43b6debbbeb08769ef6 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 223 819 4.4E-180 T 25-04-2016 SMD_RS06285 22a6d0367995ecc096cac20c204832c2 229 PANTHER PTHR31885 1 220 5.8E-37 T 25-04-2016 SMD_RS06285 22a6d0367995ecc096cac20c204832c2 229 Pfam PF07947 YhhN-like protein 30 220 1.1E-48 T 25-04-2016 IPR012506 YhhN-like GO:0016021 SMD_RS10365 abab05552a50d16503b45e9f88990b08 331 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMD_RS10365 abab05552a50d16503b45e9f88990b08 331 Gene3D G3DSA:3.40.1190.20 3 327 1.4E-88 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS10365 abab05552a50d16503b45e9f88990b08 331 Pfam PF00294 pfkB family carbohydrate kinase 3 315 1.5E-63 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMD_RS10365 abab05552a50d16503b45e9f88990b08 331 PANTHER PTHR10584 1 329 8.8E-102 T 25-04-2016 SMD_RS10365 abab05552a50d16503b45e9f88990b08 331 SUPERFAMILY SSF53613 2 324 3.59E-79 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS10365 abab05552a50d16503b45e9f88990b08 331 PANTHER PTHR10584:SF161 1 329 8.8E-102 T 25-04-2016 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 Gene3D G3DSA:1.10.3810.10 68 237 4.5E-51 T 25-04-2016 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 Gene3D G3DSA:3.40.710.10 238 612 6.1E-72 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 43 791 7.0E-229 T 25-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 SUPERFAMILY SSF53955 49 266 8.72E-64 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 704 789 1.4E-16 T 25-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 PANTHER PTHR32282 43 694 6.3E-194 T 25-04-2016 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 PANTHER PTHR32282:SF0 43 694 6.3E-194 T 25-04-2016 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 SUPERFAMILY SSF56601 218 639 1.15E-93 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 Pfam PF00912 Transglycosylase 62 236 3.1E-48 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMD_RS16455 db0d4a54dec3a2f1ef892afa89185f96 793 Pfam PF00905 Penicillin binding protein transpeptidase domain 314 539 5.5E-13 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Gene3D G3DSA:1.10.3500.10 460 505 1.0E-92 T 25-04-2016 IPR023323 Tex-like domain SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Gene3D G3DSA:1.10.3500.10 120 330 1.0E-92 T 25-04-2016 IPR023323 Tex-like domain SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SMART SM00732 334 433 3.1E-40 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Pfam PF16921 Tex protein YqgF-like domain 334 460 7.3E-55 T 25-04-2016 IPR032639 Tex protein, YqgF-like domain SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Gene3D G3DSA:1.10.150.310 508 639 3.8E-45 T 25-04-2016 IPR023097 Tex RuvX-like domain SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SUPERFAMILY SSF53098 330 478 2.81E-52 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Pfam PF09371 Tex-like protein N-terminal domain 19 202 1.7E-65 T 25-04-2016 IPR018974 Tex-like protein, N-terminal SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Gene3D G3DSA:3.30.420.140 334 459 1.8E-54 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 PANTHER PTHR10724 6 768 0.0 T 25-04-2016 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Pfam PF00575 S1 RNA binding domain 658 729 8.6E-21 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SUPERFAMILY SSF50249 647 730 1.27E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 PANTHER PTHR10724:SF1 6 768 0.0 T 25-04-2016 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Gene3D G3DSA:2.40.50.140 642 729 2.4E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Pfam PF12836 Helix-hairpin-helix motif 500 564 1.3E-27 T 25-04-2016 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SUPERFAMILY SSF47781 479 566 1.45E-26 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SUPERFAMILY SSF158832 12 329 2.22E-112 T 25-04-2016 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 Gene3D G3DSA:1.10.10.650 10 119 7.7E-45 T 25-04-2016 IPR023319 Tex-like protein, HTH domain SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SUPERFAMILY SSF47781 569 641 8.67E-19 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS13600 e4f4b6abe88c33e3d821eaf27fa5e9ef 795 SMART SM00316 658 729 5.6E-25 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 Gene3D G3DSA:2.70.70.10 133 259 1.4E-36 T 25-04-2016 SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 SUPERFAMILY SSF51261 56 258 9.94E-46 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 SMART SM00257 55 99 2.6E-9 T 25-04-2016 IPR018392 LysM domain SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 PANTHER PTHR21666 138 261 1.2E-37 T 25-04-2016 SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 Pfam PF01476 LysM domain 57 97 3.0E-10 T 25-04-2016 IPR018392 LysM domain SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 Gene3D G3DSA:3.10.350.10 57 99 1.2E-13 T 25-04-2016 IPR018392 LysM domain SMD_RS08810 4534244f118449e1bfcb15916686b4ba 261 Pfam PF01551 Peptidase family M23 161 254 7.0E-29 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS05290 e7b03e4215bc3f06589e80721d837eb2 134 PANTHER PTHR28620:SF2 14 132 5.9E-35 T 25-04-2016 SMD_RS05290 e7b03e4215bc3f06589e80721d837eb2 134 PANTHER PTHR28620 14 132 5.9E-35 T 25-04-2016 SMD_RS05290 e7b03e4215bc3f06589e80721d837eb2 134 Gene3D G3DSA:3.90.1590.10 14 113 1.1E-17 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS05290 e7b03e4215bc3f06589e80721d837eb2 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 39 114 3.4E-9 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS05290 e7b03e4215bc3f06589e80721d837eb2 134 SUPERFAMILY SSF51316 12 133 3.66E-30 T 25-04-2016 IPR011057 Mss4-like SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 SUPERFAMILY SSF74982 14 143 1.07E-49 T 25-04-2016 IPR023620 Small protein B SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 2.0E-52 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 25-04-2016 IPR020081 SsrA-binding protein, conserved site SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 141 3.0E-55 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 PANTHER PTHR30308:SF2 6 166 2.1E-78 T 25-04-2016 SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 67.808 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 Pfam PF01668 SmpB protein 18 81 4.9E-27 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 Gene3D G3DSA:2.40.280.10 17 138 3.0E-49 T 25-04-2016 IPR023620 Small protein B SMD_RS09435 77f735d231600ecf5c8e89c0d5f3084a 167 PANTHER PTHR30308 6 166 2.1E-78 T 25-04-2016 SMD_RS03205 ba86c8e41a1b61d04927355450d6d261 283 SUPERFAMILY SSF53448 12 216 8.66E-16 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03205 ba86c8e41a1b61d04927355450d6d261 283 Pfam PF00535 Glycosyl transferase family 2 14 131 5.8E-9 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS03205 ba86c8e41a1b61d04927355450d6d261 283 Gene3D G3DSA:3.90.550.10 5 214 2.1E-12 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 298 1.7E-29 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 PANTHER PTHR30097:SF4 27 391 2.2E-51 T 25-04-2016 SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 Gene3D G3DSA:2.40.50.100 195 229 5.8E-10 T 25-04-2016 SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 Gene3D G3DSA:2.40.50.100 102 132 5.8E-10 T 25-04-2016 SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 77 382 2.9E-36 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 SUPERFAMILY SSF111369 97 302 2.88E-15 T 25-04-2016 SMD_RS11225 bfbec8c3c75d791aac979cfe63eb40b4 391 PANTHER PTHR30097 27 391 2.2E-51 T 25-04-2016 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 PANTHER PTHR11699:SF210 1 498 3.9E-294 T 25-04-2016 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 Gene3D G3DSA:3.40.605.10 22 281 1.3E-97 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 PANTHER PTHR11699 1 498 3.9E-294 T 25-04-2016 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 Gene3D G3DSA:3.40.309.10 282 469 1.5E-65 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 SUPERFAMILY SSF53720 12 497 8.38E-168 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 Pfam PF00171 Aldehyde dehydrogenase family 31 493 3.6E-171 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS07340 20f2f4c39df950df5b843ed13fa36fb1 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMD_RS19250 c478d3ab5776567228817e917459a2e1 219 Pfam PF02230 Phospholipase/Carboxylesterase 12 213 6.2E-45 T 25-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 SMD_RS19250 c478d3ab5776567228817e917459a2e1 219 SUPERFAMILY SSF53474 10 216 1.92E-46 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS19250 c478d3ab5776567228817e917459a2e1 219 Gene3D G3DSA:3.40.50.1820 10 216 2.9E-61 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS19250 c478d3ab5776567228817e917459a2e1 219 PANTHER PTHR10655:SF17 1 215 5.6E-66 T 25-04-2016 SMD_RS19250 c478d3ab5776567228817e917459a2e1 219 PANTHER PTHR10655 1 215 5.6E-66 T 25-04-2016 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PIRSF PIRSF004862 11 548 4.8E-139 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PANTHER PTHR30046 6 548 2.1E-189 T 25-04-2016 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 Pfam PF08345 Flagellar M-ring protein C-terminal 260 421 2.4E-49 T 25-04-2016 IPR013556 Flagellar M-ring C-terminal SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PANTHER PTHR30046:SF0 6 548 2.1E-189 T 25-04-2016 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PRINTS PR01009 Flagellar M-ring protein signature 345 369 6.7E-33 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PRINTS PR01009 Flagellar M-ring protein signature 128 146 6.7E-33 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PRINTS PR01009 Flagellar M-ring protein signature 203 221 6.7E-33 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PRINTS PR01009 Flagellar M-ring protein signature 160 174 6.7E-33 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 PRINTS PR01009 Flagellar M-ring protein signature 273 291 6.7E-33 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 Pfam PF01514 Secretory protein of YscJ/FliF family 37 227 3.4E-63 T 25-04-2016 IPR006182 Secretory protein YscJ/FliF SMD_RS10845 8ac83ba932007dac0d7e85501c209c97 548 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 11 548 1.0E-87 T 25-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 Gene3D G3DSA:3.90.1580.10 175 421 4.0E-54 T 25-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 PANTHER PTHR23150:SF24 12 421 1.9E-108 T 25-04-2016 SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 Pfam PF12867 DinB superfamily 19 149 1.1E-11 T 25-04-2016 IPR024775 DinB-like domain SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 15 418 2.7E-159 T 25-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 SUPERFAMILY SSF56436 181 421 3.58E-62 T 25-04-2016 IPR016187 C-type lectin fold SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 Pfam PF03781 Sulfatase-modifying factor enzyme 1 201 324 3.2E-20 T 25-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 Pfam PF03781 Sulfatase-modifying factor enzyme 1 337 419 1.5E-8 T 25-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 PANTHER PTHR23150 12 421 1.9E-108 T 25-04-2016 SMD_RS21760 b130d7151714af54273c1bde77394e1f 422 SUPERFAMILY SSF109854 13 146 1.37E-6 T 25-04-2016 SMD_RS20590 a74fd4aae86522fc6c697e4c069cbbfa 772 Gene3D G3DSA:2.40.170.20 167 772 7.8E-52 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20590 a74fd4aae86522fc6c697e4c069cbbfa 772 Pfam PF00593 TonB dependent receptor 532 769 2.8E-17 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20590 a74fd4aae86522fc6c697e4c069cbbfa 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 167 9.0E-6 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS20590 a74fd4aae86522fc6c697e4c069cbbfa 772 SUPERFAMILY SSF56935 29 772 8.79E-59 T 25-04-2016 SMD_RS20590 a74fd4aae86522fc6c697e4c069cbbfa 772 Gene3D G3DSA:2.170.130.10 61 165 1.3E-4 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS20590 a74fd4aae86522fc6c697e4c069cbbfa 772 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 755 772 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 267 54.91 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 PANTHER PTHR11727 16 266 1.5E-92 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 Gene3D G3DSA:3.40.50.150 15 202 3.0E-67 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 SUPERFAMILY SSF53335 22 266 2.01E-75 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 Gene3D G3DSA:1.10.8.100 206 266 5.1E-24 T 25-04-2016 IPR023165 rRNA adenine dimethylase-like SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 25-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 16 266 2.3E-84 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 Pfam PF00398 Ribosomal RNA adenine dimethylase 16 265 2.9E-65 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMD_RS03750 7e8391e61db2f1a3be9af6039303c075 267 SMART SM00650 30 201 3.0E-79 T 25-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 Pfam PF00578 AhpC/TSA family 59 174 5.8E-17 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 SUPERFAMILY SSF52833 9 23 4.36E-33 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 SUPERFAMILY SSF52833 59 188 4.36E-33 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 PANTHER PTHR10681 55 187 1.2E-36 T 25-04-2016 SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 Gene3D G3DSA:3.40.30.10 3 190 1.3E-39 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 PANTHER PTHR10681:SF125 55 187 1.2E-36 T 25-04-2016 SMD_RS03975 dc4df51b7c5582dc034a7afd78ecf593 191 ProSitePatterns PS00194 Thioredoxin family active site. 84 102 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 259 5.8E-101 T 25-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 258 1.1E-55 T 25-04-2016 SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PANTHER PTHR24322 155 187 1.0E-53 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PANTHER PTHR24322 9 139 1.0E-53 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.6E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.6E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 9.6E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.6E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.6E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.6E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PANTHER PTHR24322:SF330 155 187 1.0E-53 T 25-04-2016 SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PANTHER PTHR24322:SF330 9 139 1.0E-53 T 25-04-2016 SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 SUPERFAMILY SSF51735 4 259 2.32E-76 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09890 d1143de801a39ce3efa91c7f2b730c5e 260 Gene3D G3DSA:3.40.50.720 2 258 5.2E-81 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10340 bcc1482d0e8b5193d4dbb73547f59918 64 SUPERFAMILY SSF55008 2 62 3.67E-15 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS10340 bcc1482d0e8b5193d4dbb73547f59918 64 Gene3D G3DSA:3.30.70.100 1 60 1.1E-18 T 25-04-2016 SMD_RS10340 bcc1482d0e8b5193d4dbb73547f59918 64 Pfam PF00403 Heavy-metal-associated domain 3 59 1.4E-11 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 Pfam PF00691 OmpA family 125 220 3.5E-22 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 PANTHER PTHR30128 56 230 8.9E-57 T 25-04-2016 SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 Pfam PF13488 Glycine zipper 50 95 6.0E-11 T 25-04-2016 SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 Gene3D G3DSA:3.30.1330.60 104 226 4.8E-41 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 SUPERFAMILY SSF103088 113 229 7.72E-40 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 PRINTS PR01021 OMPA domain signature 171 187 3.1E-17 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 PRINTS PR01021 OMPA domain signature 126 148 3.1E-17 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS09295 644f2a105ee059f4e201a5ee575bdcd6 231 PRINTS PR01021 OMPA domain signature 156 171 3.1E-17 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS11340 1c4c9ba51dda0b1e3c9628445c18e61a 230 Gene3D G3DSA:3.40.50.720 7 156 3.5E-26 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS11340 1c4c9ba51dda0b1e3c9628445c18e61a 230 PANTHER PTHR14097:SF8 1 227 2.6E-32 T 25-04-2016 SMD_RS11340 1c4c9ba51dda0b1e3c9628445c18e61a 230 PANTHER PTHR14097 1 227 2.6E-32 T 25-04-2016 SMD_RS11340 1c4c9ba51dda0b1e3c9628445c18e61a 230 SUPERFAMILY SSF51735 7 202 4.35E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09580 79104885f473d3e73e988d5e4364c117 419 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.1E-36 T 25-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS09580 79104885f473d3e73e988d5e4364c117 419 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 313 2.4E-106 T 25-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS09580 79104885f473d3e73e988d5e4364c117 419 Pfam PF07055 Enoyl reductase FAD binding domain 343 406 4.0E-28 T 25-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS09580 79104885f473d3e73e988d5e4364c117 419 PANTHER PTHR37480 2 312 9.5E-230 T 25-04-2016 SMD_RS09580 79104885f473d3e73e988d5e4364c117 419 PANTHER PTHR37480 329 418 9.5E-230 T 25-04-2016 SMD_RS09580 79104885f473d3e73e988d5e4364c117 419 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 412 54.243 T 25-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS10420 d093e45ad3dab6a9bea5955c118e3fcb 99 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 5 98 2.2E-27 T 25-04-2016 IPR012661 Conserved hypothetical protein CHP02448 SMD_RS10420 d093e45ad3dab6a9bea5955c118e3fcb 99 Pfam PF09498 Protein of unknown function (DUF2388) 30 98 2.1E-26 T 25-04-2016 IPR012661 Conserved hypothetical protein CHP02448 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 133 2.2E-47 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 25-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 SUPERFAMILY SSF50891 4 133 5.84E-56 T 25-04-2016 IPR029000 Cyclophilin-like domain SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PANTHER PTHR11071 4 126 5.9E-67 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 97 3.2E-34 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 109 3.2E-34 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.2E-34 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 3.2E-34 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.2E-34 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 PIRSF PIRSF001467 2 155 6.4E-55 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMD_RS04335 012c0907c1a4e053652830aa7c51b41d 163 Gene3D G3DSA:2.40.100.10 5 133 1.1E-58 T 25-04-2016 IPR029000 Cyclophilin-like domain SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PANTHER PTHR10992:SF860 210 300 2.4E-148 T 25-04-2016 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PANTHER PTHR10992:SF860 1 174 2.4E-148 T 25-04-2016 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 SUPERFAMILY SSF53474 2 311 1.35E-65 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PANTHER PTHR10992 210 300 2.4E-148 T 25-04-2016 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PANTHER PTHR10992 1 174 2.4E-148 T 25-04-2016 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 7.6E-7 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.6E-7 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 7.6E-7 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 5.7E-31 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PIRSF PIRSF006431 1 313 5.8E-137 T 25-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 3.2E-152 T 25-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.1E-13 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.1E-13 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.1E-13 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS03865 4b267319c9842afa310ea714807306ef 313 Gene3D G3DSA:3.40.50.1820 7 308 1.7E-73 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11880 4d2f816e614bc5cd4838a6058e520422 344 Gene3D G3DSA:3.20.20.210 3 343 4.8E-89 T 25-04-2016 SMD_RS11880 4d2f816e614bc5cd4838a6058e520422 344 SUPERFAMILY SSF51726 5 341 7.46E-68 T 25-04-2016 SMD_RS11880 4d2f816e614bc5cd4838a6058e520422 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 7 332 2.1E-37 T 25-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SMD_RS11880 4d2f816e614bc5cd4838a6058e520422 344 PIRSF PIRSF005632 1 344 1.2E-198 T 25-04-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit SMD_RS11880 4d2f816e614bc5cd4838a6058e520422 344 PANTHER PTHR30519 237 344 1.5E-101 T 25-04-2016 SMD_RS11880 4d2f816e614bc5cd4838a6058e520422 344 PANTHER PTHR30519 6 218 1.5E-101 T 25-04-2016 SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 SUPERFAMILY SSF57716 38 72 4.28E-8 T 25-04-2016 SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 3.2E-5 T 25-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 3.2E-5 T 25-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 25-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 PANTHER PTHR38777 2 88 9.1E-29 T 25-04-2016 SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 67 1.9E-12 T 25-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SMD_RS16085 780538768d7755452ed8ca12f42d7d84 88 PANTHER PTHR38777:SF1 2 88 9.1E-29 T 25-04-2016 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 SUPERFAMILY SSF51621 8 424 1.35E-155 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 PANTHER PTHR21631 8 431 7.1E-169 T 25-04-2016 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 ProSitePatterns PS00161 Isocitrate lyase signature. 185 190 - T 25-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 PIRSF PIRSF001362 1 427 6.2E-238 T 25-04-2016 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 Gene3D G3DSA:3.20.20.60 9 406 1.1E-161 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 247 4.6E-107 T 25-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 Pfam PF00463 Isocitrate lyase family 248 424 4.8E-45 T 25-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SMD_RS01205 54d349a08f8a7b4d42a8fe1478b4e15e 433 Pfam PF00463 Isocitrate lyase family 9 247 1.4E-57 T 25-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 PANTHER PTHR30537:SF5 1 299 2.8E-98 T 25-04-2016 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 SUPERFAMILY SSF46785 4 112 2.47E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 Pfam PF03466 LysR substrate binding domain 88 293 8.3E-45 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 Gene3D G3DSA:3.40.190.10 179 261 9.8E-9 T 25-04-2016 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 PANTHER PTHR30537 1 299 2.8E-98 T 25-04-2016 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 SUPERFAMILY SSF53850 89 297 1.61E-42 T 25-04-2016 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 Gene3D G3DSA:3.40.190.10 92 178 8.4E-23 T 25-04-2016 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.3E-21 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.1E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.1E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.1E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04535 c6bd4d5eaf18d5842c4d3fc7e8d1b487 306 Gene3D G3DSA:1.10.10.10 4 85 1.1E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21330 58bc414f31b91711fe0c445f50ca3b70 465 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 435 3.5E-153 T 25-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SMD_RS21330 58bc414f31b91711fe0c445f50ca3b70 465 PANTHER PTHR30365 1 454 8.3E-278 T 25-04-2016 SMD_RS21330 58bc414f31b91711fe0c445f50ca3b70 465 PANTHER PTHR30365:SF8 1 454 8.3E-278 T 25-04-2016 SMD_RS21330 58bc414f31b91711fe0c445f50ca3b70 465 PIRSF PIRSF006446 1 457 5.9E-185 T 25-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 PIRSF PIRSF002867 2 311 7.8E-96 T 25-04-2016 IPR024181 Chemotaxis response regulator CheV SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 SMART SM00448 182 303 1.2E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 SMART SM00260 18 157 1.2E-23 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 Pfam PF00072 Response regulator receiver domain 184 299 1.4E-16 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 Gene3D G3DSA:2.30.30.40 96 148 1.1E-4 T 25-04-2016 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 Pfam PF01584 CheW-like domain 23 159 1.3E-33 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 Gene3D G3DSA:3.40.50.2300 180 309 4.5E-24 T 25-04-2016 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 PANTHER PTHR22617 9 173 9.2E-88 T 25-04-2016 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 SUPERFAMILY SSF52172 178 309 5.83E-23 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 PANTHER PTHR22617:SF30 9 173 9.2E-88 T 25-04-2016 SMD_RS10970 8edf99e422b3015b933d46365af43cea 314 SUPERFAMILY SSF50341 18 160 1.2E-32 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.6E-23 T 25-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.6E-23 T 25-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.6E-23 T 25-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 141 18.288 T 25-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 Pfam PF02416 mttA/Hcf106 family 4 43 7.0E-7 T 25-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 78 3.6E-30 T 25-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 PANTHER PTHR33162:SF4 2 140 2.2E-34 T 25-04-2016 SMD_RS21650 12d862fbecf4036b1d7e4cd90f5c00dc 150 PANTHER PTHR33162 2 140 2.2E-34 T 25-04-2016 SMD_RS05440 b81f62cbbb5ca0ed09b5d6efd42e4de4 105 PANTHER PTHR33231 1 95 1.0E-31 T 25-04-2016 SMD_RS05440 b81f62cbbb5ca0ed09b5d6efd42e4de4 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 4.8E-24 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMD_RS05440 b81f62cbbb5ca0ed09b5d6efd42e4de4 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.6E-28 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMD_RS05440 b81f62cbbb5ca0ed09b5d6efd42e4de4 105 Gene3D G3DSA:3.30.160.100 1 95 5.4E-31 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMD_RS05440 b81f62cbbb5ca0ed09b5d6efd42e4de4 105 SUPERFAMILY SSF69754 1 96 1.57E-30 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 Gene3D G3DSA:3.40.190.10 178 262 3.9E-23 T 25-04-2016 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 Gene3D G3DSA:3.40.190.10 90 177 4.2E-15 T 25-04-2016 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 Pfam PF03466 LysR substrate binding domain 87 288 1.1E-40 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 SUPERFAMILY SSF53850 88 290 1.03E-38 T 25-04-2016 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.3E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 PANTHER PTHR30346 1 289 1.3E-73 T 25-04-2016 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 Gene3D G3DSA:1.10.10.10 1 85 3.8E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 SUPERFAMILY SSF46785 1 87 2.29E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS01795 dbff1f6ab56feb6705ccb343b27ad031 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11085 100073fcc85fe419105266485b90b475 323 Gene3D G3DSA:3.50.50.60 123 247 1.1E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 11 316 7.4E-118 T 25-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 218 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 147 171 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 132 144 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 44 59 3.6E-74 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 SUPERFAMILY SSF51905 6 316 2.19E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PANTHER PTHR22912:SF48 1 319 4.3E-159 T 25-04-2016 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 9.4E-38 T 25-04-2016 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 9.4E-38 T 25-04-2016 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 9.4E-38 T 25-04-2016 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 9.4E-38 T 25-04-2016 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 9.4E-38 T 25-04-2016 SMD_RS11085 100073fcc85fe419105266485b90b475 323 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 139 159 - T 25-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 300 5.2E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 Gene3D G3DSA:3.50.50.60 8 122 3.5E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11085 100073fcc85fe419105266485b90b475 323 PANTHER PTHR22912 1 319 4.3E-159 T 25-04-2016 SMD_RS04455 5e193cf2c78a43a4a4a4cfef75e43a27 274 PIRSF PIRSF012318 6 274 5.1E-104 T 25-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 SMD_RS04455 5e193cf2c78a43a4a4a4cfef75e43a27 274 Gene3D G3DSA:1.20.1260.10 94 214 7.4E-7 T 25-04-2016 IPR012347 Ferritin-related SMD_RS04455 5e193cf2c78a43a4a4a4cfef75e43a27 274 PANTHER PTHR21496:SF10 10 274 4.5E-116 T 25-04-2016 SMD_RS04455 5e193cf2c78a43a4a4a4cfef75e43a27 274 Pfam PF04305 Protein of unknown function (DUF455) 21 266 1.5E-98 T 25-04-2016 IPR007402 Protein of unknown function DUF455 SMD_RS04455 5e193cf2c78a43a4a4a4cfef75e43a27 274 SUPERFAMILY SSF47240 83 254 1.27E-21 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS04455 5e193cf2c78a43a4a4a4cfef75e43a27 274 PANTHER PTHR21496 10 274 4.5E-116 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 167 5.0E-11 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 Gene3D G3DSA:2.170.130.10 35 176 5.8E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 SUPERFAMILY SSF56935 33 756 3.8E-103 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 PANTHER PTHR32552 355 618 6.2E-58 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 PANTHER PTHR32552 642 756 6.2E-58 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 PANTHER PTHR32552 13 330 6.2E-58 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 Gene3D G3DSA:2.40.170.20 177 756 1.6E-79 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 PANTHER PTHR32552:SF33 355 618 6.2E-58 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 PANTHER PTHR32552:SF33 642 756 6.2E-58 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 PANTHER PTHR32552:SF33 13 330 6.2E-58 T 25-04-2016 SMD_RS00290 3c6b6d5cc1ca82cf5aa52d4eba389d9f 756 Pfam PF00593 TonB dependent receptor 485 754 4.1E-16 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.878 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 SUPERFAMILY SSF56047 2 131 3.79E-43 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 PANTHER PTHR11758 1 132 6.8E-56 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 Pfam PF00410 Ribosomal protein S8 5 131 4.5E-46 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 Gene3D G3DSA:3.30.1370.30 2 73 5.1E-26 T 25-04-2016 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 Gene3D G3DSA:3.30.1490.10 76 131 5.6E-26 T 25-04-2016 SMD_RS04240 3874eadcaaa55a52b4f5f4719af00193 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 SUPERFAMILY SSF50129 1 139 1.43E-28 T 25-04-2016 IPR011032 GroES-like SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 Pfam PF13602 Zinc-binding dehydrogenase 192 334 2.9E-17 T 25-04-2016 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 SMART SM00829 13 334 5.6E-9 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 11 337 1.1E-120 T 25-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 96 7.0E-6 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 PANTHER PTHR11695:SF558 14 335 7.9E-98 T 25-04-2016 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 Gene3D G3DSA:3.40.50.720 158 252 5.2E-20 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 SUPERFAMILY SSF51735 115 285 1.1E-34 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 Gene3D G3DSA:3.90.180.10 1 157 6.2E-34 T 25-04-2016 IPR011032 GroES-like SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 149 170 - T 25-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 SMD_RS04385 7ebf2ed0ce4395c1ce0f295f6b0d2212 339 PANTHER PTHR11695 14 335 7.9E-98 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS19280 b42bc5f3009a95ec79227f09cb104134 303 SMART SM00245 68 285 7.8E-14 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS19280 b42bc5f3009a95ec79227f09cb104134 303 Pfam PF03572 Peptidase family S41 118 282 9.3E-28 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS19280 b42bc5f3009a95ec79227f09cb104134 303 PANTHER PTHR11261 21 283 4.0E-24 T 25-04-2016 SMD_RS19280 b42bc5f3009a95ec79227f09cb104134 303 SUPERFAMILY SSF52096 24 284 9.28E-39 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS19280 b42bc5f3009a95ec79227f09cb104134 303 Gene3D G3DSA:3.90.226.10 111 283 4.5E-36 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 PANTHER PTHR30514:SF0 2 330 4.9E-98 T 25-04-2016 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 SUPERFAMILY SSF53067 8 326 1.56E-62 T 25-04-2016 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 PANTHER PTHR30514 2 330 4.9E-98 T 25-04-2016 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 Gene3D G3DSA:3.30.420.40 4 108 4.6E-39 T 25-04-2016 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 Hamap MF_00524 Glucokinase [glk]. 5 326 38.042 T 25-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 TIGRFAM TIGR00749 glk: glucokinase 9 320 1.7E-82 T 25-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 Pfam PF02685 Glucokinase 9 325 2.1E-113 T 25-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMD_RS09130 34de5ec8cf0eb5c76d4a9b162b609392 335 Gene3D G3DSA:3.40.367.20 109 305 7.0E-67 T 25-04-2016 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.7E-83 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 4.2E-39 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 SUPERFAMILY SSF52440 1 113 4.32E-47 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 PANTHER PTHR18866 1 447 6.3E-298 T 25-04-2016 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 SUPERFAMILY SSF51246 332 444 1.52E-42 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 3.6E-229 T 25-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 Gene3D G3DSA:3.30.470.20 204 444 3.8E-99 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 SUPERFAMILY SSF56059 83 343 9.19E-68 T 25-04-2016 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 SMART SM00878 336 441 4.0E-66 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 Gene3D G3DSA:3.30.1490.20 130 203 3.5E-29 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.1E-44 T 25-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SMD_RS19925 c78b39be6eae68a4964fd0bddad97f69 455 Gene3D G3DSA:3.40.50.20 1 129 5.1E-51 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS21445 ca07d5749974e2c2e3f5d552a9b11daf 54 PANTHER PTHR15238 3 54 1.6E-22 T 25-04-2016 SMD_RS21445 ca07d5749974e2c2e3f5d552a9b11daf 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 6.0E-23 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21445 ca07d5749974e2c2e3f5d552a9b11daf 54 Pfam PF00471 Ribosomal protein L33 7 52 8.8E-17 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21445 ca07d5749974e2c2e3f5d552a9b11daf 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 52 13.434 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21445 ca07d5749974e2c2e3f5d552a9b11daf 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 20 39 - T 25-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS21445 ca07d5749974e2c2e3f5d552a9b11daf 54 SUPERFAMILY SSF57829 3 52 2.93E-18 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMD_RS13500 a6974b8136f2f2b0ee8c24c9d51ca8be 477 SUPERFAMILY SSF56935 135 475 1.39E-8 T 25-04-2016 SMD_RS13500 a6974b8136f2f2b0ee8c24c9d51ca8be 477 Pfam PF02530 Porin subfamily 122 421 3.8E-15 T 25-04-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 PANTHER PTHR18901:SF9 6 229 3.2E-48 T 25-04-2016 SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 Gene3D G3DSA:1.10.150.240 22 87 4.5E-14 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 189 1.2E-11 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 7.3E-19 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 Gene3D G3DSA:3.40.50.1000 89 223 4.1E-39 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 Gene3D G3DSA:3.40.50.1000 5 21 4.1E-39 T 25-04-2016 IPR023214 HAD-like domain SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 PANTHER PTHR18901 6 229 3.2E-48 T 25-04-2016 SMD_RS11935 f2549f51e3f0486c102ab3e5dd78867c 231 SUPERFAMILY SSF56784 5 223 4.72E-50 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 550 1050 1.4E-216 T 25-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 SUPERFAMILY SSF53720 590 1057 1.44E-129 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Pfam PF01619 Proline dehydrogenase 212 507 4.3E-93 T 25-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Pfam PF00171 Aldehyde dehydrogenase family 593 1054 1.6E-120 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 PANTHER PTHR11699 562 1057 1.3E-182 T 25-04-2016 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 PIRSF PIRSF000197 18 1069 0.0 T 25-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Gene3D G3DSA:1.20.5.550 27 76 4.3E-18 T 25-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 SUPERFAMILY SSF51730 201 548 2.55E-113 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 854 865 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 SUPERFAMILY SSF81935 28 200 5.62E-63 T 25-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Gene3D G3DSA:3.40.605.10 591 841 1.5E-72 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 85 198 6.8E-45 T 25-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 PANTHER PTHR11699:SF18 562 1057 1.3E-182 T 25-04-2016 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Gene3D G3DSA:1.10.2060.10 80 199 1.0E-49 T 25-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Gene3D G3DSA:3.40.309.10 842 1033 7.7E-44 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS02015 aee201d81d738aa82fbd239d0498a1e4 1072 Gene3D G3DSA:3.20.20.220 201 548 5.3E-108 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 SUPERFAMILY SSF51338 423 461 1.54E-7 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 Pfam PF01979 Amidohydrolase family 81 457 1.1E-15 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 Gene3D G3DSA:2.30.40.10 24 86 7.1E-27 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 Gene3D G3DSA:2.30.40.10 431 462 7.1E-27 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 Gene3D G3DSA:3.20.20.140 279 403 1.7E-43 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 Gene3D G3DSA:3.20.20.140 87 241 1.7E-43 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 Gene3D G3DSA:2.30.40.10 404 430 8.3E-5 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 PANTHER PTHR11271:SF33 292 321 1.2E-16 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 PANTHER PTHR11271:SF33 349 484 1.2E-16 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 PANTHER PTHR11271:SF33 24 252 1.2E-16 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 SUPERFAMILY SSF51556 280 421 2.12E-45 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 SUPERFAMILY SSF51556 84 242 2.12E-45 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 SUPERFAMILY SSF51338 21 85 1.52E-15 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 SUPERFAMILY SSF51338 162 172 1.52E-15 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 PANTHER PTHR11271 292 321 1.2E-16 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 PANTHER PTHR11271 349 484 1.2E-16 T 25-04-2016 SMD_RS13260 92b7d9520ed7b88b06fd398d41c19daa 485 PANTHER PTHR11271 24 252 1.2E-16 T 25-04-2016 SMD_RS08690 2b20d71b414169abf8f60f49f100fba9 255 SMART SM00450 118 219 2.5E-10 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS08690 2b20d71b414169abf8f60f49f100fba9 255 PANTHER PTHR22778 8 242 3.4E-60 T 25-04-2016 SMD_RS08690 2b20d71b414169abf8f60f49f100fba9 255 SUPERFAMILY SSF52821 107 234 2.19E-24 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS08690 2b20d71b414169abf8f60f49f100fba9 255 Pfam PF00581 Rhodanese-like domain 119 213 5.8E-5 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS08690 2b20d71b414169abf8f60f49f100fba9 255 Gene3D G3DSA:3.40.250.10 106 229 5.9E-27 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS08690 2b20d71b414169abf8f60f49f100fba9 255 PANTHER PTHR22778:SF21 8 242 3.4E-60 T 25-04-2016 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 SUPERFAMILY SSF56935 301 774 1.5E-64 T 25-04-2016 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 SUPERFAMILY SSF56935 49 203 1.5E-64 T 25-04-2016 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 Gene3D G3DSA:2.40.170.20 302 775 1.4E-55 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 Gene3D G3DSA:2.40.170.20 179 204 1.4E-55 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 135 4.2E-11 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 Gene3D G3DSA:2.170.130.10 18 140 2.0E-11 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 Pfam PF00593 TonB dependent receptor 527 775 4.5E-21 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 PANTHER PTHR32552 1 319 8.7E-19 T 25-04-2016 SMD_RS08905 718d03a628e5e0169257bcf153dc0532 776 PANTHER PTHR32552 383 776 8.7E-19 T 25-04-2016 SMD_RS19285 fbbe0116d676f127019cb2f49232b502 154 SUPERFAMILY SSF46785 5 138 1.06E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19285 fbbe0116d676f127019cb2f49232b502 154 Pfam PF12802 MarR family 37 89 1.7E-8 T 25-04-2016 SMD_RS19285 fbbe0116d676f127019cb2f49232b502 154 Gene3D G3DSA:1.10.10.10 5 141 3.7E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00685 a16c09fae44d4b999a0c7674f2789ff8 125 Pfam PF04829 Pre-toxin domain with VENN motif 92 118 4.1E-6 T 25-04-2016 IPR006914 VENN motif-containing domain SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 Gene3D G3DSA:2.30.30.30 124 185 7.9E-31 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 PANTHER PTHR30265 1 184 6.7E-76 T 25-04-2016 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 7.7E-62 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 Pfam PF02357 Transcription termination factor nusG 2 116 5.8E-23 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 SMART SM00739 131 158 1.7E-5 T 25-04-2016 IPR005824 KOW SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 SUPERFAMILY SSF82679 1 121 9.29E-36 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.887 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 25-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 SMART SM00738 1 119 8.3E-46 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 Pfam PF00467 KOW motif 134 166 1.4E-7 T 25-04-2016 IPR005824 KOW SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 Gene3D G3DSA:3.30.70.940 1 122 1.9E-40 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 SUPERFAMILY SSF50104 129 184 1.1E-18 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 9.2E-19 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 9.2E-19 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMD_RS04110 3a7647e5a32299eaa95466e5caa6f371 186 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 9.2E-19 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMD_RS20050 626bb62654f976cbc2f4c799f1ae22fc 296 SUPERFAMILY SSF74653 137 226 1.19E-9 T 25-04-2016 SMD_RS20050 626bb62654f976cbc2f4c799f1ae22fc 296 Gene3D G3DSA:3.30.1150.10 126 233 6.4E-9 T 25-04-2016 SMD_RS14715 4ee33ff92f4e60fe72cb4cf2eb017e18 1055 Pfam PF00754 F5/8 type C domain 205 304 8.3E-15 T 25-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SMD_RS14715 4ee33ff92f4e60fe72cb4cf2eb017e18 1055 Gene3D G3DSA:2.60.120.260 205 306 3.9E-20 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS14715 4ee33ff92f4e60fe72cb4cf2eb017e18 1055 SUPERFAMILY SSF49785 205 307 8.51E-16 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS14715 4ee33ff92f4e60fe72cb4cf2eb017e18 1055 SUPERFAMILY SSF49785 28 182 8.42E-19 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS14715 4ee33ff92f4e60fe72cb4cf2eb017e18 1055 Gene3D G3DSA:1.50.10.10 620 805 9.1E-9 T 25-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMD_RS14715 4ee33ff92f4e60fe72cb4cf2eb017e18 1055 SUPERFAMILY SSF48208 561 987 4.91E-37 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS06765 e0a1c8979535fcf890041264bc4dacce 387 SUPERFAMILY SSF52096 117 270 1.19E-10 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS18340 3d98047d5417365035e0a876f266e2fc 371 Pfam PF13439 Glycosyltransferase Family 4 16 168 1.3E-23 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMD_RS18340 3d98047d5417365035e0a876f266e2fc 371 PANTHER PTHR12526:SF141 10 370 9.1E-67 T 25-04-2016 SMD_RS18340 3d98047d5417365035e0a876f266e2fc 371 Pfam PF00534 Glycosyl transferases group 1 196 344 1.0E-15 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMD_RS18340 3d98047d5417365035e0a876f266e2fc 371 Gene3D G3DSA:3.40.50.2000 155 342 2.2E-15 T 25-04-2016 SMD_RS18340 3d98047d5417365035e0a876f266e2fc 371 SUPERFAMILY SSF53756 1 369 1.12E-53 T 25-04-2016 SMD_RS18340 3d98047d5417365035e0a876f266e2fc 371 PANTHER PTHR12526 10 370 9.1E-67 T 25-04-2016 SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 PANTHER PTHR18964:SF2 1 368 5.3E-151 T 25-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 SUPERFAMILY SSF53756 2 370 1.61E-120 T 25-04-2016 SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 367 1.3E-109 T 25-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 368 1.3E-132 T 25-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 Gene3D G3DSA:3.40.50.2000 210 368 3.4E-60 T 25-04-2016 SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 PANTHER PTHR18964 1 368 5.3E-151 T 25-04-2016 SMD_RS03245 98411c63baaabf37634c2228db6dab2f 391 Gene3D G3DSA:3.40.50.2000 2 209 1.6E-72 T 25-04-2016 SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 Pfam PF13410 Glutathione S-transferase, C-terminal domain 120 184 4.0E-7 T 25-04-2016 SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 Gene3D G3DSA:3.40.30.10 55 94 2.0E-14 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 70 1.4E-13 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 SUPERFAMILY SSF47616 73 196 6.68E-27 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 Gene3D G3DSA:3.40.30.10 3 54 9.4E-16 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 Gene3D G3DSA:1.20.1050.10 95 193 3.5E-24 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 PANTHER PTHR11260:SF253 2 191 4.7E-52 T 25-04-2016 SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 PANTHER PTHR11260 2 191 4.7E-52 T 25-04-2016 SMD_RS21890 22c31ae3db8407d1fc8349fe35e1905b 200 SUPERFAMILY SSF52833 1 79 1.88E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 833 0.0 T 25-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 Pfam PF08482 ATP-dependent helicase C-terminal 682 820 1.7E-50 T 25-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 Pfam PF04408 Helicase associated domain (HA2) 386 455 1.1E-20 T 25-04-2016 IPR007502 Helicase-associated domain GO:0004386 SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 SUPERFAMILY SSF52540 23 341 1.1E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 PIRSF PIRSF005496 1 834 0.0 T 25-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 PANTHER PTHR18934 708 719 2.2E-137 T 25-04-2016 SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 PANTHER PTHR18934 7 449 2.2E-137 T 25-04-2016 SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 Gene3D G3DSA:3.40.50.300 7 164 3.5E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 PANTHER PTHR18934:SF118 708 719 2.2E-137 T 25-04-2016 SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 PANTHER PTHR18934:SF118 7 449 2.2E-137 T 25-04-2016 SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 Gene3D G3DSA:3.40.50.300 205 341 3.1E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 Pfam PF00271 Helicase conserved C-terminal domain 211 329 7.2E-15 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 SMART SM00847 385 514 2.5E-12 T 25-04-2016 IPR007502 Helicase-associated domain GO:0004386 SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 SMART SM00487 1 190 2.4E-12 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS21135 9c5b91af8fdd3d85a24f74081940da22 834 SMART SM00490 228 330 8.6E-18 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS05990 70286a06c2c34e1a31ce3c9471f93fbc 419 Pfam PF00083 Sugar (and other) transporter 12 211 1.1E-21 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS05990 70286a06c2c34e1a31ce3c9471f93fbc 419 SUPERFAMILY SSF103473 5 414 1.05E-62 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05990 70286a06c2c34e1a31ce3c9471f93fbc 419 Gene3D G3DSA:1.20.1250.20 234 416 1.2E-19 T 25-04-2016 SMD_RS05990 70286a06c2c34e1a31ce3c9471f93fbc 419 Gene3D G3DSA:1.20.1250.20 5 212 6.6E-27 T 25-04-2016 SMD_RS05990 70286a06c2c34e1a31ce3c9471f93fbc 419 PANTHER PTHR23508 1 413 1.5E-97 T 25-04-2016 SMD_RS05990 70286a06c2c34e1a31ce3c9471f93fbc 419 Pfam PF07690 Major Facilitator Superfamily 264 416 1.9E-10 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS13630 2771766d370f33e43aa989be1a208e1e 359 TIGRFAM TIGR01834 PHA_synth_III_E: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit 12 299 7.5E-67 T 25-04-2016 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit SMD_RS13630 2771766d370f33e43aa989be1a208e1e 359 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 12 293 1.6E-86 T 25-04-2016 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit SMD_RS08695 96784c8f02f7e57d1296f62e04bef3a6 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 4.6E-134 T 25-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 SMD_RS08695 96784c8f02f7e57d1296f62e04bef3a6 331 Gene3D G3DSA:3.20.20.30 3 321 9.0E-86 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS08695 96784c8f02f7e57d1296f62e04bef3a6 331 PANTHER PTHR30137:SF2 1 324 7.8E-141 T 25-04-2016 SMD_RS08695 96784c8f02f7e57d1296f62e04bef3a6 331 Pfam PF00296 Luciferase-like monooxygenase 18 295 1.4E-34 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS08695 96784c8f02f7e57d1296f62e04bef3a6 331 PANTHER PTHR30137 1 324 7.8E-141 T 25-04-2016 SMD_RS08695 96784c8f02f7e57d1296f62e04bef3a6 331 SUPERFAMILY SSF51679 2 322 4.06E-81 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 25-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 Pfam PF07559 Flagellar basal body protein FlaE 177 288 8.1E-21 T 25-04-2016 IPR011491 Flagellar hook protein FlgE SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 Pfam PF00460 Flagella basal body rod protein 3 33 6.0E-8 T 25-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 PANTHER PTHR30435:SF1 1 123 6.1E-97 T 25-04-2016 SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 PANTHER PTHR30435:SF1 285 407 6.1E-97 T 25-04-2016 SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 SUPERFAMILY SSF117143 79 368 5.1E-75 T 25-04-2016 SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 389 7.6E-104 T 25-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 406 4.3E-20 T 25-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 PANTHER PTHR30435 1 123 6.1E-97 T 25-04-2016 SMD_RS10950 b65a0cb894b93eaf9b6e486beec06837 407 PANTHER PTHR30435 285 407 6.1E-97 T 25-04-2016 SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 PANTHER PTHR21180:SF9 134 417 9.8E-123 T 25-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 PANTHER PTHR21180 134 417 9.8E-123 T 25-04-2016 SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 SUPERFAMILY SSF102114 45 190 1.12E-14 T 25-04-2016 SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 SUPERFAMILY SSF47781 318 379 4.89E-8 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 SMART SM00729 56 295 0.0067 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 Gene3D G3DSA:3.80.30.20 64 299 2.7E-10 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMD_RS02860 2becc09eaae685a210aef3a935e2a5d9 427 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 413 3.0E-169 T 25-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative SMD_RS17055 dd2790233f6590ddfd29c6bda02fcd73 389 Pfam PF04984 Phage tail sheath protein 98 376 6.4E-41 T 25-04-2016 IPR007067 Tail sheath protein SMD_RS17055 dd2790233f6590ddfd29c6bda02fcd73 389 Pfam PF04984 Phage tail sheath protein 1 96 1.6E-10 T 25-04-2016 IPR007067 Tail sheath protein SMD_RS17055 dd2790233f6590ddfd29c6bda02fcd73 389 PANTHER PTHR35861:SF1 1 388 3.3E-111 T 25-04-2016 SMD_RS17055 dd2790233f6590ddfd29c6bda02fcd73 389 PANTHER PTHR35861 1 388 3.3E-111 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 Pfam PF00271 Helicase conserved C-terminal domain 584 694 2.4E-6 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 PANTHER PTHR10799:SF573 469 727 5.5E-15 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 PANTHER PTHR10799:SF573 346 424 5.5E-15 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 PANTHER PTHR10799:SF573 71 207 5.5E-15 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 SUPERFAMILY SSF52540 186 205 1.3E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 SUPERFAMILY SSF52540 68 158 1.3E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 PANTHER PTHR10799 469 727 5.5E-15 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 PANTHER PTHR10799 346 424 5.5E-15 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 PANTHER PTHR10799 71 207 5.5E-15 T 25-04-2016 SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 Gene3D G3DSA:3.40.50.300 344 402 9.4E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 Gene3D G3DSA:3.40.50.300 62 186 9.4E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 SUPERFAMILY SSF52540 570 735 1.54E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 SUPERFAMILY SSF52540 350 392 1.54E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 Gene3D G3DSA:3.40.50.300 577 704 1.4E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 SUPERFAMILY SSF52540 344 411 1.3E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08045 421a69cf688aa3c7d59a616f0cf9a914 758 SMART SM00487 69 412 3.0E-10 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 502 1.7E-198 T 25-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PANTHER PTHR22594:SF4 11 503 6.7E-270 T 25-04-2016 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 260 277 8.3E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 213 229 8.3E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 384 400 8.3E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 242 255 8.3E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 197 207 8.3E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 SUPERFAMILY SSF50249 10 153 1.2E-37 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 499 1.7E-83 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 Gene3D G3DSA:3.30.930.10 155 497 1.1E-120 T 25-04-2016 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 Pfam PF01336 OB-fold nucleic acid binding domain 68 144 5.7E-15 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 502 43.998 T 25-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 SUPERFAMILY SSF55681 160 500 1.72E-121 T 25-04-2016 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 PANTHER PTHR22594 11 503 6.7E-270 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS10590 c8e3673a7098e94a02871c6a1c41da7b 503 Gene3D G3DSA:2.40.50.140 13 152 2.9E-43 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 25-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 SUPERFAMILY SSF52313 6 230 3.27E-92 T 25-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.2E-37 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.2E-37 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.2E-37 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.2E-37 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.2E-37 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.2E-37 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.239 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.7E-101 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 Gene3D G3DSA:1.10.287.610 100 152 2.5E-22 T 25-04-2016 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 Gene3D G3DSA:3.40.50.10490 158 245 2.4E-64 T 25-04-2016 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 Gene3D G3DSA:3.40.50.10490 23 99 2.4E-64 T 25-04-2016 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 Pfam PF00318 Ribosomal protein S2 9 224 8.1E-93 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 25-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SMD_RS07020 a8a1d4a1e09b4b0a30097ebcfc0dcc72 268 PANTHER PTHR12534 1 268 8.4E-118 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 SUPERFAMILY SSF46785 7 110 5.22E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 Pfam PF03466 LysR substrate binding domain 88 293 8.6E-47 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 PANTHER PTHR30537:SF5 1 301 5.8E-112 T 25-04-2016 SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 Gene3D G3DSA:1.10.10.10 6 84 1.2E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 PANTHER PTHR30537 1 301 5.8E-112 T 25-04-2016 SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.8E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 Gene3D G3DSA:3.40.190.10 92 177 1.7E-24 T 25-04-2016 SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 SUPERFAMILY SSF53850 91 296 9.05E-48 T 25-04-2016 SMD_RS14165 eac9a911ac32e1f81de7853639fdbb82 301 Gene3D G3DSA:3.40.190.10 178 260 6.1E-7 T 25-04-2016 SMD_RS11810 5c73f387e9cc6b50dd348a7a49df52f4 477 Pfam PF07396 Phosphate-selective porin O and P 119 477 9.9E-25 T 25-04-2016 IPR010870 Phosphate-selective porin O/P SMD_RS11810 5c73f387e9cc6b50dd348a7a49df52f4 477 SUPERFAMILY SSF56935 229 377 2.72E-8 T 25-04-2016 SMD_RS11810 5c73f387e9cc6b50dd348a7a49df52f4 477 SUPERFAMILY SSF56935 405 477 2.72E-8 T 25-04-2016 SMD_RS11810 5c73f387e9cc6b50dd348a7a49df52f4 477 SUPERFAMILY SSF56935 117 200 2.72E-8 T 25-04-2016 SMD_RS11810 5c73f387e9cc6b50dd348a7a49df52f4 477 Gene3D G3DSA:2.40.160.10 93 477 2.7E-76 T 25-04-2016 IPR023614 Porin domain SMD_RS13700 6f9575744d6bae2aa7d8e3b3a0368acf 255 Gene3D G3DSA:3.40.50.360 1 223 1.3E-54 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS13700 6f9575744d6bae2aa7d8e3b3a0368acf 255 SUPERFAMILY SSF52218 1 216 2.0E-53 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS13700 6f9575744d6bae2aa7d8e3b3a0368acf 255 Pfam PF02525 Flavodoxin-like fold 1 205 4.2E-45 T 25-04-2016 IPR003680 Flavodoxin-like fold SMD_RS13700 6f9575744d6bae2aa7d8e3b3a0368acf 255 PANTHER PTHR10204 1 237 1.2E-45 T 25-04-2016 SMD_RS04345 2bd0d4991d6e8b89c51f3e58d22ff8a0 204 PANTHER PTHR11079:SF86 6 203 3.4E-53 T 25-04-2016 SMD_RS04345 2bd0d4991d6e8b89c51f3e58d22ff8a0 204 SUPERFAMILY SSF55120 3 204 3.36E-58 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS04345 2bd0d4991d6e8b89c51f3e58d22ff8a0 204 Pfam PF00849 RNA pseudouridylate synthase 11 159 8.5E-26 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS04345 2bd0d4991d6e8b89c51f3e58d22ff8a0 204 PANTHER PTHR11079 6 203 3.4E-53 T 25-04-2016 SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 216 23.591 T 25-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 PANTHER PTHR30634:SF11 36 214 8.9E-14 T 25-04-2016 SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 SUPERFAMILY SSF89392 44 214 1.65E-36 T 25-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 Pfam PF03550 Outer membrane lipoprotein LolB 58 214 6.6E-39 T 25-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 Gene3D G3DSA:2.50.20.10 14 214 8.7E-46 T 25-04-2016 SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 10 214 9.2E-25 T 25-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SMD_RS04005 bbb0fc44f2acb294a2914f383643a2ca 219 PANTHER PTHR30634 36 214 8.9E-14 T 25-04-2016 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 PANTHER PTHR12526:SF295 27 490 9.0E-186 T 25-04-2016 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 PANTHER PTHR12526 27 490 9.0E-186 T 25-04-2016 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 Pfam PF00534 Glycosyl transferases group 1 312 454 8.6E-16 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 Pfam PF08323 Starch synthase catalytic domain 27 259 2.0E-59 T 25-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 Gene3D G3DSA:3.40.50.2000 276 471 5.0E-64 T 25-04-2016 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 Hamap MF_00484 Glycogen synthase [glgA]. 26 491 38.516 T 25-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 SUPERFAMILY SSF53756 28 493 8.72E-93 T 25-04-2016 SMD_RS12705 9a4c83df32c4e0bdfe74b0080dd1fb16 496 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 27 490 1.0E-136 T 25-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SMD_RS14780 11b89e6ad0dd20fab7e36fc382eedd2a 376 SUPERFAMILY SSF103473 3 369 1.44E-40 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS14780 11b89e6ad0dd20fab7e36fc382eedd2a 376 Gene3D G3DSA:1.20.1250.20 4 183 3.6E-17 T 25-04-2016 SMD_RS14780 11b89e6ad0dd20fab7e36fc382eedd2a 376 PANTHER PTHR23502 1 350 1.7E-38 T 25-04-2016 SMD_RS14780 11b89e6ad0dd20fab7e36fc382eedd2a 376 Pfam PF07690 Major Facilitator Superfamily 17 343 1.7E-27 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 PANTHER PTHR30469:SF15 34 410 2.1E-89 T 25-04-2016 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 PANTHER PTHR30469 34 410 2.1E-89 T 25-04-2016 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 SUPERFAMILY SSF111369 77 327 3.01E-22 T 25-04-2016 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 Gene3D G3DSA:2.40.50.100 89 121 8.3E-14 T 25-04-2016 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 Gene3D G3DSA:2.40.50.100 210 234 8.3E-14 T 25-04-2016 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 66 410 1.7E-50 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS01685 b1d538090fd92c6c865d80f79e69bead 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 85 322 1.6E-19 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS16450 a58930773b1e4cc47b00a109b62194b0 191 PANTHER PTHR30295:SF1 25 188 1.4E-58 T 25-04-2016 SMD_RS16450 a58930773b1e4cc47b00a109b62194b0 191 Gene3D G3DSA:1.20.1260.10 40 186 1.7E-53 T 25-04-2016 IPR012347 Ferritin-related SMD_RS16450 a58930773b1e4cc47b00a109b62194b0 191 SUPERFAMILY SSF47240 43 186 9.9E-38 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS16450 a58930773b1e4cc47b00a109b62194b0 191 PANTHER PTHR30295 25 188 1.4E-58 T 25-04-2016 SMD_RS16450 a58930773b1e4cc47b00a109b62194b0 191 Pfam PF00210 Ferritin-like domain 49 186 1.3E-28 T 25-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SMD_RS16450 a58930773b1e4cc47b00a109b62194b0 191 PIRSF PIRSF018063 24 191 2.4E-63 T 25-04-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 353 3.2E-39 T 25-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 Gene3D G3DSA:3.40.50.2000 10 201 1.7E-61 T 25-04-2016 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 PANTHER PTHR21015 11 359 1.5E-112 T 25-04-2016 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 PANTHER PTHR21015:SF22 11 359 1.5E-112 T 25-04-2016 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 11 147 3.0E-37 T 25-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 SUPERFAMILY SSF53756 10 359 8.94E-111 T 25-04-2016 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 Gene3D G3DSA:3.40.50.2000 256 338 2.1E-4 T 25-04-2016 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 11 361 35.798 T 25-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS03460 dfc3d48c4fe951156e8443a84addaf9b 362 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 9 357 2.1E-106 T 25-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 PANTHER PTHR24220:SF305 19 315 2.7E-157 T 25-04-2016 SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 PANTHER PTHR24220 19 315 2.7E-157 T 25-04-2016 SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 SUPERFAMILY SSF52540 15 244 1.98E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 SMART SM00382 43 225 6.9E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 Gene3D G3DSA:3.40.50.300 11 239 4.1E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21105 63b2a1b2b722a9d2a305a159b44fd260 322 Pfam PF00005 ABC transporter 34 178 4.8E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 SUPERFAMILY SSF141868 446 689 5.36E-91 T 25-04-2016 IPR001633 EAL domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 SMART SM00267 258 429 2.0E-62 T 25-04-2016 IPR000160 GGDEF domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 242 1.7E-10 T 25-04-2016 IPR005330 MHYT domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 170 1.8E-16 T 25-04-2016 IPR005330 MHYT domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Pfam PF03707 Bacterial signalling protein N terminal repeat 53 110 5.0E-21 T 25-04-2016 IPR005330 MHYT domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Gene3D G3DSA:3.30.70.270 271 437 8.2E-57 T 25-04-2016 SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 428 7.6E-43 T 25-04-2016 IPR000160 GGDEF domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 SUPERFAMILY SSF55073 274 429 2.35E-47 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Gene3D G3DSA:3.20.20.450 443 689 4.4E-102 T 25-04-2016 IPR001633 EAL domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Pfam PF00563 EAL domain 445 680 1.4E-78 T 25-04-2016 IPR001633 EAL domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 SMART SM00052 439 685 4.3E-116 T 25-04-2016 IPR001633 EAL domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 PANTHER PTHR10799:SF774 302 539 1.2E-76 T 25-04-2016 SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 PANTHER PTHR10799:SF774 119 242 1.2E-76 T 25-04-2016 SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 424 2.3E-45 T 25-04-2016 IPR000160 GGDEF domain SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 PANTHER PTHR10799 302 539 1.2E-76 T 25-04-2016 SMD_RS10780 7a60905dd0ce2dac60ba2f5621dd99b8 710 PANTHER PTHR10799 119 242 1.2E-76 T 25-04-2016 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.2E-4 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 Gene3D G3DSA:3.40.50.20 5 121 1.5E-39 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 SUPERFAMILY SSF56059 114 314 4.77E-58 T 25-04-2016 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 PANTHER PTHR11609 1 383 7.1E-217 T 25-04-2016 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 392 52.254 T 25-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 Gene3D G3DSA:3.30.470.20 200 388 9.9E-71 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 5.0E-181 T 25-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 Gene3D G3DSA:3.30.1490.20 124 199 2.4E-27 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 Pfam PF02222 ATP-grasp domain 124 295 5.7E-56 T 25-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 SUPERFAMILY SSF51246 320 391 7.38E-15 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 SUPERFAMILY SSF52440 4 113 9.93E-33 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS06175 a59207efe5d880d0259eba72ba54d9ce 395 PANTHER PTHR11609:SF7 1 383 7.1E-217 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 Pfam PF13533 Biotin-lipoyl like 58 105 1.2E-14 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 PANTHER PTHR30386:SF6 1 372 5.0E-174 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 SUPERFAMILY SSF111369 56 105 5.36E-9 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 SUPERFAMILY SSF111369 134 174 5.36E-9 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 SUPERFAMILY SSF111369 162 264 5.1E-10 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 Gene3D G3DSA:2.40.50.100 211 245 1.7E-18 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 Gene3D G3DSA:2.40.50.100 58 90 1.7E-18 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 PANTHER PTHR30386 1 372 5.0E-174 T 25-04-2016 SMD_RS07130 29c2bbdf2c1d4e2f249e21a90115b77e 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 153 287 1.3E-13 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 SUPERFAMILY SSF51984 2 90 1.03E-16 T 25-04-2016 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Gene3D G3DSA:3.40.1190.10 94 315 5.3E-87 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Gene3D G3DSA:3.90.190.20 316 452 2.5E-34 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 PANTHER PTHR23135:SF17 1 442 2.8E-247 T 25-04-2016 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Gene3D G3DSA:3.40.50.720 1 91 6.8E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 SUPERFAMILY SSF53623 100 311 6.8E-53 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 SUPERFAMILY SSF53244 314 450 1.06E-35 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 PANTHER PTHR23135 1 442 2.8E-247 T 25-04-2016 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Pfam PF01225 Mur ligase family, catalytic domain 4 98 2.4E-12 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 452 55.759 T 25-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Pfam PF08245 Mur ligase middle domain 109 294 1.8E-24 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 4 452 3.4E-186 T 25-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SMD_RS18100 44fe0415a2a1c9b6cff58efb6c4e6981 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 379 7.4E-11 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 Pfam PF01026 TatD related DNase 5 252 3.6E-66 T 25-04-2016 IPR001130 TatD family GO:0016788 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 PANTHER PTHR10060 4 256 6.7E-93 T 25-04-2016 IPR001130 TatD family GO:0016788 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 SUPERFAMILY SSF51556 4 254 5.59E-80 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 Gene3D G3DSA:3.20.20.140 4 254 2.6E-81 T 25-04-2016 SMD_RS14540 9f8b64a530443a74728968a78edccaa4 257 PIRSF PIRSF005902 2 257 7.1E-69 T 25-04-2016 IPR001130 TatD family GO:0016788 SMD_RS10965 846ee1b40546bd0794a6254f1870badf 131 PANTHER PTHR30435:SF12 3 131 9.1E-38 T 25-04-2016 SMD_RS10965 846ee1b40546bd0794a6254f1870badf 131 PIRSF PIRSF002889 2 131 1.8E-34 T 25-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SMD_RS10965 846ee1b40546bd0794a6254f1870badf 131 PANTHER PTHR30435 3 131 9.1E-38 T 25-04-2016 SMD_RS10965 846ee1b40546bd0794a6254f1870badf 131 Pfam PF00460 Flagella basal body rod protein 11 39 2.2E-6 T 25-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMD_RS10965 846ee1b40546bd0794a6254f1870badf 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 128 1.0E-27 T 25-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SMD_RS10405 4bb684a84ad2d282962b9621609c3efa 189 SUPERFAMILY SSF55811 55 188 1.96E-15 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS10405 4bb684a84ad2d282962b9621609c3efa 189 Gene3D G3DSA:3.90.79.10 55 184 5.9E-15 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS10405 4bb684a84ad2d282962b9621609c3efa 189 Pfam PF00293 NUDIX domain 56 173 1.7E-7 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS08280 4be8d8b47a7c3ecf9aa66a4f86c33f5b 379 Pfam PF02687 FtsX-like permease family 262 374 1.9E-9 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS08280 4be8d8b47a7c3ecf9aa66a4f86c33f5b 379 PANTHER PTHR30489 1 379 3.0E-16 T 25-04-2016 SMD_RS05900 2d1dca5a55b7fd09f9583181119fbcb0 143 PANTHER PTHR34818 8 143 2.1E-24 T 25-04-2016 SMD_RS05900 2d1dca5a55b7fd09f9583181119fbcb0 143 Gene3D G3DSA:2.30.110.10 9 138 8.0E-34 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS05900 2d1dca5a55b7fd09f9583181119fbcb0 143 SUPERFAMILY SSF50475 13 137 5.43E-22 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS05900 2d1dca5a55b7fd09f9583181119fbcb0 143 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 9 137 2.5E-26 T 25-04-2016 SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 PANTHER PTHR22953:SF0 20 349 8.2E-56 T 25-04-2016 SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 PANTHER PTHR22953 20 349 8.2E-56 T 25-04-2016 SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 SUPERFAMILY SSF56300 147 419 3.8E-45 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 SUPERFAMILY SSF49363 39 141 7.19E-10 T 25-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 Pfam PF00149 Calcineurin-like phosphoesterase 149 347 4.6E-13 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 Gene3D G3DSA:2.60.40.380 57 141 2.5E-8 T 25-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 Gene3D G3DSA:3.60.21.10 145 425 8.7E-54 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS09280 b8eb4e82b269066ea4f6da829ed9b020 455 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 45 140 5.2E-14 T 25-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 Gene3D G3DSA:3.10.310.10 6 179 4.2E-79 T 25-04-2016 SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 PANTHER PTHR30349 1 138 1.4E-59 T 25-04-2016 SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 Pfam PF04303 PrpF protein 6 353 3.1E-137 T 25-04-2016 IPR007400 PrpF protein SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 SUPERFAMILY SSF54506 5 171 6.12E-67 T 25-04-2016 SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 PANTHER PTHR30349:SF39 1 138 1.4E-59 T 25-04-2016 SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 SUPERFAMILY SSF54506 175 353 7.32E-57 T 25-04-2016 SMD_RS11830 86968e452cab8b907c46ff2d9a9a2ccb 373 Gene3D G3DSA:3.10.310.10 180 333 1.7E-52 T 25-04-2016 SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 SMART SM00670 6 145 6.8E-9 T 25-04-2016 IPR002716 PIN domain SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 Pfam PF13638 PIN domain 8 158 1.8E-38 T 25-04-2016 IPR002716 PIN domain SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 PANTHER PTHR30473:SF2 204 466 3.9E-195 T 25-04-2016 SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 PANTHER PTHR30473:SF2 5 185 3.9E-195 T 25-04-2016 SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 Gene3D G3DSA:3.40.50.300 251 465 1.3E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 SUPERFAMILY SSF88723 108 158 1.77E-10 T 25-04-2016 IPR029060 PIN domain-like SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 SUPERFAMILY SSF88723 7 67 1.77E-10 T 25-04-2016 IPR029060 PIN domain-like SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 Pfam PF02562 PhoH-like protein 254 457 3.4E-55 T 25-04-2016 IPR003714 PhoH-like protein GO:0005524 SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 Gene3D G3DSA:3.40.50.1010 8 66 4.0E-9 T 25-04-2016 IPR029060 PIN domain-like SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 Gene3D G3DSA:3.40.50.1010 108 160 4.0E-9 T 25-04-2016 IPR029060 PIN domain-like SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 PANTHER PTHR30473 204 466 3.9E-195 T 25-04-2016 SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 PANTHER PTHR30473 5 185 3.9E-195 T 25-04-2016 SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 SUPERFAMILY SSF52540 132 189 4.51E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09020 2ddf19acebab322b1f7609def948763b 466 SUPERFAMILY SSF52540 253 445 4.51E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01325 c4d63a33c5c42301429ec33e6013fff5 223 PANTHER PTHR36701 2 216 4.7E-88 T 25-04-2016 SMD_RS01325 c4d63a33c5c42301429ec33e6013fff5 223 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 7.7E-64 T 25-04-2016 IPR003828 Protein of unknown function DUF208 SMD_RS20020 a0527c59dd100b08c3f406dbe7e7c62f 315 PIRSF PIRSF003097 19 309 4.0E-52 T 25-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SMD_RS20020 a0527c59dd100b08c3f406dbe7e7c62f 315 PANTHER PTHR30489 35 314 3.5E-43 T 25-04-2016 SMD_RS20020 a0527c59dd100b08c3f406dbe7e7c62f 315 Pfam PF02687 FtsX-like permease family 189 303 3.1E-9 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS12385 b8094b6a3ee5f20fef586af94ddfee9b 310 Pfam PF04199 Putative cyclase 60 245 7.7E-27 T 25-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SMD_RS12385 b8094b6a3ee5f20fef586af94ddfee9b 310 SUPERFAMILY SSF102198 56 309 3.14E-23 T 25-04-2016 SMD_RS12385 b8094b6a3ee5f20fef586af94ddfee9b 310 Gene3D G3DSA:3.50.30.50 60 309 1.3E-26 T 25-04-2016 SMD_RS12385 b8094b6a3ee5f20fef586af94ddfee9b 310 PANTHER PTHR34861 28 310 4.4E-30 T 25-04-2016 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 SUPERFAMILY SSF46929 151 194 6.54E-8 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.4E-19 T 25-04-2016 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Gene3D G3DSA:2.40.50.140 1 64 5.0E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 SMART SM00278 108 127 0.046 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 SMART SM00278 73 92 4.3 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Gene3D G3DSA:1.10.8.10 151 194 4.1E-13 T 25-04-2016 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 30.37 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Pfam PF01330 RuvA N terminal domain 1 62 7.9E-21 T 25-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 SUPERFAMILY SSF47781 66 134 1.25E-20 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 SUPERFAMILY SSF50249 1 63 4.34E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 196 1.4E-48 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Gene3D G3DSA:1.10.150.20 68 137 3.7E-29 T 25-04-2016 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 PANTHER PTHR33796 2 197 1.3E-73 T 25-04-2016 SMD_RS17225 d849d137548be1db19f1cf3b9d9005c7 197 Pfam PF07499 RuvA, C-terminal domain 151 194 4.1E-9 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 Pfam PF00348 Polyprenyl synthetase 30 265 3.1E-57 T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 PANTHER PTHR12001 3 284 8.5E-102 T 25-04-2016 IPR017446 Polyprenyl synthetase-related SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 211 223 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 PANTHER PTHR12001:SF23 3 284 8.5E-102 T 25-04-2016 SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 SUPERFAMILY SSF48576 6 285 6.88E-86 T 25-04-2016 IPR008949 Isoprenoid synthase domain SMD_RS15825 a65c791de1630ef06c0b94208af33ff9 292 Gene3D G3DSA:1.10.600.10 4 290 2.7E-93 T 25-04-2016 IPR008949 Isoprenoid synthase domain SMD_RS08865 500be8c82b316023b0abb65e090bb277 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 160 3.4E-49 T 25-04-2016 IPR008136 CinA, C-terminal SMD_RS08865 500be8c82b316023b0abb65e090bb277 164 PANTHER PTHR13939 6 164 2.2E-64 T 25-04-2016 SMD_RS08865 500be8c82b316023b0abb65e090bb277 164 Gene3D G3DSA:3.90.950.20 8 162 4.4E-53 T 25-04-2016 IPR008136 CinA, C-terminal SMD_RS08865 500be8c82b316023b0abb65e090bb277 164 Pfam PF02464 Competence-damaged protein 13 161 3.1E-55 T 25-04-2016 IPR008136 CinA, C-terminal SMD_RS08865 500be8c82b316023b0abb65e090bb277 164 SUPERFAMILY SSF142433 7 160 3.27E-53 T 25-04-2016 IPR008136 CinA, C-terminal SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 25-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 TIGRFAM TIGR01312 XylB: xylulokinase 6 487 3.6E-149 T 25-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 PIRSF PIRSF000538 1 496 8.1E-109 T 25-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 SUPERFAMILY SSF53067 4 251 2.91E-55 T 25-04-2016 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 SUPERFAMILY SSF53067 250 493 3.29E-50 T 25-04-2016 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 Gene3D G3DSA:3.30.420.40 2 249 4.1E-47 T 25-04-2016 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 PANTHER PTHR10196:SF67 1 486 3.5E-144 T 25-04-2016 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 PANTHER PTHR10196 1 486 3.5E-144 T 25-04-2016 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 440 5.9E-29 T 25-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 Gene3D G3DSA:3.30.420.40 250 489 1.6E-42 T 25-04-2016 SMD_RS11770 a50d53081d1f9df21ec2cfd91272d216 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 5.0E-52 T 25-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 363 4.5E-143 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-12 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 266 284 4.6E-12 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-12 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 PANTHER PTHR10229 1 414 2.1E-160 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 Gene3D G3DSA:3.40.50.300 197 362 6.9E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 Hamap MF_00900 GTPase HflX [hflX]. 26 393 46.508 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 Pfam PF01926 50S ribosome-binding GTPase 199 317 6.9E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 Pfam PF16360 GTP-binding GTPase Middle Region 113 192 1.7E-26 T 25-04-2016 IPR032305 GTP-binding protein, middle domain SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 PIRSF PIRSF006809 3 422 1.7E-141 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 SUPERFAMILY SSF52540 198 363 2.77E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 PANTHER PTHR10229:SF0 1 414 2.1E-160 T 25-04-2016 SMD_RS08860 5a0cdda0b2bf5ce6bae930f8779fef42 436 Pfam PF13167 GTP-binding GTPase N-terminal 25 111 4.5E-29 T 25-04-2016 IPR025121 GTPase HflX, N-terminal SMD_RS06950 4863c195b414b8dd6c7df095504002f8 219 PANTHER PTHR10954 12 219 2.8E-64 T 25-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SMD_RS06950 4863c195b414b8dd6c7df095504002f8 219 SUPERFAMILY SSF53098 19 211 2.58E-62 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS06950 4863c195b414b8dd6c7df095504002f8 219 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 206 34.847 T 25-04-2016 IPR022898 Ribonuclease HII GO:0004523 SMD_RS06950 4863c195b414b8dd6c7df095504002f8 219 Pfam PF01351 Ribonuclease HII 27 205 5.7E-34 T 25-04-2016 IPR024567 Ribonuclease HII/HIII domain SMD_RS06950 4863c195b414b8dd6c7df095504002f8 219 Gene3D G3DSA:3.30.420.10 25 167 2.7E-39 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS02790 294c8b982ed30f7adaefceb4f99e92e4 191 PANTHER PTHR10173 36 169 8.2E-54 T 25-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SMD_RS02790 294c8b982ed30f7adaefceb4f99e92e4 191 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 47 171 1.3E-51 T 25-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMD_RS02790 294c8b982ed30f7adaefceb4f99e92e4 191 Pfam PF01641 SelR domain 51 169 9.2E-50 T 25-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMD_RS02790 294c8b982ed30f7adaefceb4f99e92e4 191 SUPERFAMILY SSF51316 46 171 3.71E-56 T 25-04-2016 IPR011057 Mss4-like SMD_RS02790 294c8b982ed30f7adaefceb4f99e92e4 191 PANTHER PTHR10173:SF18 36 169 8.2E-54 T 25-04-2016 SMD_RS02790 294c8b982ed30f7adaefceb4f99e92e4 191 Gene3D G3DSA:2.170.150.20 42 171 7.3E-56 T 25-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.7E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PANTHER PTHR24322 165 196 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PANTHER PTHR24322 16 149 1.9E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.1E-6 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.1E-6 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.1E-6 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 Gene3D G3DSA:3.40.50.720 7 257 1.8E-67 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 3.1E-54 T 25-04-2016 SMD_RS10515 1f43a5555596b2f3a3cda976f9ba4798 259 SUPERFAMILY SSF51735 12 256 2.2E-66 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 SUPERFAMILY SSF52540 2 266 4.91E-119 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 Gene3D G3DSA:3.40.50.880 290 543 5.9E-88 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 2.6E-237 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 Pfam PF00117 Glutamine amidotransferase class-I 303 537 1.3E-53 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 SUPERFAMILY SSF52317 290 543 3.55E-79 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 Pfam PF06418 CTP synthase N-terminus 5 265 1.6E-123 T 25-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 PANTHER PTHR11550 1 543 0.0 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.895 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMD_RS08745 bdfcca0c317ecec266e1e873e74189a1 554 Gene3D G3DSA:3.40.50.300 4 282 5.7E-128 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 SUPERFAMILY SSF103088 244 349 3.79E-34 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PRINTS PR01021 OMPA domain signature 280 295 5.8E-10 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PRINTS PR01021 OMPA domain signature 250 272 5.8E-10 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PRINTS PR01021 OMPA domain signature 295 311 5.8E-10 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PANTHER PTHR30128 248 349 1.6E-39 T 25-04-2016 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 Pfam PF00691 OmpA family 249 344 5.7E-22 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 312 2.5E-7 T 25-04-2016 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 333 351 2.5E-7 T 25-04-2016 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 313 332 2.5E-7 T 25-04-2016 SMD_RS05075 c887b5654046cc9a80763528f2c0c142 351 Gene3D G3DSA:3.30.1330.60 245 349 1.1E-37 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 SMART SM00839 143 350 3.3E-74 T 25-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PANTHER PTHR11606:SF3 24 350 6.6E-144 T 25-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 Gene3D G3DSA:3.40.192.10 2 146 1.0E-64 T 25-04-2016 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 Gene3D G3DSA:3.40.50.720 147 335 2.4E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 SUPERFAMILY SSF51735 140 344 3.68E-52 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 12 126 7.0E-28 T 25-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 298 8.1E-13 T 25-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PANTHER PTHR11606 24 350 6.6E-144 T 25-04-2016 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 SUPERFAMILY SSF53223 3 143 2.08E-49 T 25-04-2016 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PIRSF PIRSF000188 1 351 1.3E-149 T 25-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 3.2E-19 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 3.2E-19 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 3.2E-19 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMD_RS16115 1f4a663ac019c3d11930d3712650777b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 3.2E-19 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMD_RS08585 a582a5043f0843f88319560cd934666d 304 PANTHER PTHR16222 1 293 8.6E-65 T 25-04-2016 SMD_RS08585 a582a5043f0843f88319560cd934666d 304 SUPERFAMILY SSF101478 2 296 1.31E-74 T 25-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMD_RS08585 a582a5043f0843f88319560cd934666d 304 PANTHER PTHR16222:SF12 1 293 8.6E-65 T 25-04-2016 SMD_RS08585 a582a5043f0843f88319560cd934666d 304 Pfam PF03747 ADP-ribosylglycohydrolase 9 274 5.7E-67 T 25-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 SUPERFAMILY SSF53187 30 91 2.41E-56 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 SUPERFAMILY SSF53187 406 518 2.41E-56 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 SUPERFAMILY SSF53187 287 377 2.41E-56 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 Gene3D G3DSA:3.40.630.10 294 523 1.8E-64 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 Gene3D G3DSA:3.40.630.10 36 95 1.8E-64 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 PANTHER PTHR12053:SF3 403 527 6.2E-50 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 Pfam PF04389 Peptidase family M28 295 513 2.9E-36 T 25-04-2016 IPR007484 Peptidase M28 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 PANTHER PTHR12053 265 375 6.2E-50 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 PANTHER PTHR12053 403 527 6.2E-50 T 25-04-2016 SMD_RS06705 695e875f2788dc8ddc786ccfbb169307 530 PANTHER PTHR12053:SF3 265 375 6.2E-50 T 25-04-2016 SMD_RS06305 909aad4e01c21839d8b79c9aa9caa0f9 322 PANTHER PTHR30273 6 322 6.1E-43 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS06305 909aad4e01c21839d8b79c9aa9caa0f9 322 PANTHER PTHR30273:SF2 6 322 6.1E-43 T 25-04-2016 SMD_RS06305 909aad4e01c21839d8b79c9aa9caa0f9 322 PIRSF PIRSF018266 3 318 6.2E-63 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS06305 909aad4e01c21839d8b79c9aa9caa0f9 322 Pfam PF16344 Domain of unknown function (DUF4974) 216 301 1.9E-7 T 25-04-2016 IPR032508 Protein FecR, C-terminal SMD_RS06305 909aad4e01c21839d8b79c9aa9caa0f9 322 Pfam PF04773 FecR protein 121 206 2.8E-13 T 25-04-2016 IPR006860 FecR protein SMD_RS06305 909aad4e01c21839d8b79c9aa9caa0f9 322 Pfam PF16220 Domain of unknown function (DUF4880) 14 56 5.9E-13 T 25-04-2016 IPR032623 FecR, N-terminal SMD_RS20675 da7b64acf00e15d6ad77bd206ec49952 433 SUPERFAMILY SSF53383 60 431 6.19E-61 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS20675 da7b64acf00e15d6ad77bd206ec49952 433 PANTHER PTHR11601:SF40 1 432 2.8E-109 T 25-04-2016 SMD_RS20675 da7b64acf00e15d6ad77bd206ec49952 433 PANTHER PTHR11601 1 432 2.8E-109 T 25-04-2016 SMD_RS20675 da7b64acf00e15d6ad77bd206ec49952 433 Gene3D G3DSA:3.90.1150.10 318 431 1.5E-10 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS20675 da7b64acf00e15d6ad77bd206ec49952 433 Pfam PF00266 Aminotransferase class-V 86 375 1.1E-36 T 25-04-2016 IPR000192 Aminotransferase class V domain SMD_RS20675 da7b64acf00e15d6ad77bd206ec49952 433 Gene3D G3DSA:3.40.640.10 82 317 4.9E-55 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 Pfam PF01513 ATP-NAD kinase 26 221 8.7E-13 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 Hamap MF_00361 NAD kinase [nadK]. 5 257 20.396 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 PANTHER PTHR20275:SF7 6 257 4.8E-125 T 25-04-2016 SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 Gene3D G3DSA:3.40.50.10330 20 111 8.4E-15 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 PANTHER PTHR20275 6 257 4.8E-125 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 SUPERFAMILY SSF111331 25 244 1.31E-51 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMD_RS14325 cda419b4878dd92b73a7aade33bdefab 257 Gene3D G3DSA:2.60.200.30 112 226 1.1E-26 T 25-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMD_RS16920 2c3e8084baceadbdc7b195a5a31c4fa6 86 Gene3D G3DSA:1.10.260.40 1 85 1.4E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS16920 2c3e8084baceadbdc7b195a5a31c4fa6 86 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 22 73 2.2E-10 T 25-04-2016 IPR031856 Putative bacterial antitoxin YdaS SMD_RS11470 0458d3dd9866bd6418bb6566a8f7e2b1 677 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 144 4.8E-15 T 25-04-2016 SMD_RS11470 0458d3dd9866bd6418bb6566a8f7e2b1 677 SUPERFAMILY SSF55874 37 179 1.96E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11470 0458d3dd9866bd6418bb6566a8f7e2b1 677 Gene3D G3DSA:3.30.565.10 37 188 3.2E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 Pfam PF00696 Amino acid kinase family 44 259 1.6E-28 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 PIRSF PIRSF036441 22 442 8.2E-258 T 25-04-2016 IPR011242 Acetylglutamate kinase argB GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 Gene3D G3DSA:3.40.630.30 307 385 2.0E-4 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 276 434 1.6E-50 T 25-04-2016 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 TIGRFAM TIGR00761 argB: acetylglutamate kinase 43 264 6.2E-62 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 PANTHER PTHR23342:SF0 1 431 7.4E-179 T 25-04-2016 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 SUPERFAMILY SSF55729 304 400 4.72E-5 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 SUPERFAMILY SSF53633 16 294 5.86E-53 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 Gene3D G3DSA:3.40.1160.10 41 292 2.6E-70 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMD_RS14945 6cc05e5c956eaac76e9cee5ccb8913cc 442 PANTHER PTHR23342 1 431 7.4E-179 T 25-04-2016 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 Gene3D G3DSA:3.20.20.70 9 351 4.0E-155 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 PANTHER PTHR21225:SF7 5 350 7.6E-244 T 25-04-2016 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 PANTHER PTHR21225 5 350 7.6E-244 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 5.0E-161 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 SUPERFAMILY SSF51569 7 348 2.09E-138 T 25-04-2016 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 PIRSF PIRSF001361 1 352 2.4E-161 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMD_RS19765 f8c5cb8e190c4640a32517e54117ecf5 357 Pfam PF00793 DAHP synthetase I family 40 338 4.5E-101 T 25-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMD_RS21940 bc6da0a912caeff1d7825fc71e089c87 320 Pfam PF03741 Integral membrane protein TerC family 80 282 1.1E-55 T 25-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SMD_RS21940 bc6da0a912caeff1d7825fc71e089c87 320 PANTHER PTHR30238 4 309 6.4E-151 T 25-04-2016 SMD_RS21940 bc6da0a912caeff1d7825fc71e089c87 320 PANTHER PTHR30238:SF0 4 309 6.4E-151 T 25-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SMD_RS21940 bc6da0a912caeff1d7825fc71e089c87 320 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 311 1.8E-121 T 25-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 456 1.3E-144 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 88 103 - T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.3E-51 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PRINTS PR00175 Sodium/alanine symporter signature 297 315 3.3E-51 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PRINTS PR00175 Sodium/alanine symporter signature 425 445 3.3E-51 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.3E-51 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PRINTS PR00175 Sodium/alanine symporter signature 362 384 3.3E-51 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PRINTS PR00175 Sodium/alanine symporter signature 88 110 3.3E-51 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PANTHER PTHR30330 1 322 6.7E-252 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PANTHER PTHR30330 342 482 6.7E-252 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 Pfam PF01235 Sodium:alanine symporter family 51 468 6.4E-155 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PANTHER PTHR30330:SF7 1 322 6.7E-252 T 25-04-2016 SMD_RS17585 6fe488be9d4eef778a08f35593ba6f91 483 PANTHER PTHR30330:SF7 342 482 6.7E-252 T 25-04-2016 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 345 2.9E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 343 3.1E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 305 3.1E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 324 3.1E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 277 291 3.1E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 126 215 4.3E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 PANTHER PTHR24423:SF505 101 347 2.1E-78 T 25-04-2016 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 SUPERFAMILY SSF47384 123 189 1.96E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 SUPERFAMILY SSF55874 188 344 3.93E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 SMART SM00387 236 346 4.4E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 SMART SM00388 124 194 7.3E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 Gene3D G3DSA:1.10.287.130 124 183 4.3E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 Gene3D G3DSA:3.30.565.10 194 345 5.5E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12240 7c113a5630ebfc25beb4f4a35fc29ed8 351 PANTHER PTHR24423 101 347 2.1E-78 T 25-04-2016 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 Gene3D G3DSA:1.10.3660.10 166 278 2.9E-15 T 25-04-2016 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 SUPERFAMILY SSF55021 299 362 1.34E-7 T 25-04-2016 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 SUPERFAMILY SSF51735 9 156 3.68E-22 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 PANTHER PTHR21363:SF0 1 372 1.4E-46 T 25-04-2016 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 PANTHER PTHR21363 1 372 1.4E-46 T 25-04-2016 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 Gene3D G3DSA:3.30.70.260 301 364 3.1E-6 T 25-04-2016 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 Gene3D G3DSA:3.40.50.720 10 165 5.6E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 Pfam PF02153 Prephenate dehydrogenase 52 256 1.7E-23 T 25-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 SUPERFAMILY SSF48179 159 259 7.25E-18 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMD_RS09510 5908d542f5231a7555bd2e8fd7278b5e 374 Pfam PF01842 ACT domain 303 360 8.2E-9 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMD_RS13820 2d31a16d890ec9d11b219db3f58eeb47 403 PANTHER PTHR23501 8 395 3.4E-101 T 25-04-2016 SMD_RS13820 2d31a16d890ec9d11b219db3f58eeb47 403 Gene3D G3DSA:1.20.1250.20 214 389 9.4E-14 T 25-04-2016 SMD_RS13820 2d31a16d890ec9d11b219db3f58eeb47 403 PANTHER PTHR23501:SF4 8 395 3.4E-101 T 25-04-2016 SMD_RS13820 2d31a16d890ec9d11b219db3f58eeb47 403 SUPERFAMILY SSF103473 7 391 8.63E-58 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS13820 2d31a16d890ec9d11b219db3f58eeb47 403 Gene3D G3DSA:1.20.1250.20 16 208 1.2E-27 T 25-04-2016 SMD_RS13820 2d31a16d890ec9d11b219db3f58eeb47 403 Pfam PF07690 Major Facilitator Superfamily 23 354 1.5E-37 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS21025 e1f4bee07f4ff5e2d5f6074384c22da0 599 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 589 2.4E-85 T 25-04-2016 IPR010281 Protein of unknown function DUF885 SMD_RS21025 e1f4bee07f4ff5e2d5f6074384c22da0 599 PANTHER PTHR33361 1 595 1.1E-274 T 25-04-2016 SMD_RS21025 e1f4bee07f4ff5e2d5f6074384c22da0 599 PANTHER PTHR33361:SF3 1 595 1.1E-274 T 25-04-2016 SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 Gene3D G3DSA:3.90.180.10 1 141 5.4E-36 T 25-04-2016 IPR011032 GroES-like SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 SUPERFAMILY SSF51735 114 290 4.97E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 SMART SM00829 11 323 9.1E-9 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 SUPERFAMILY SSF50129 1 144 3.04E-33 T 25-04-2016 IPR011032 GroES-like SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 PANTHER PTHR11695 16 325 8.4E-70 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 Pfam PF00107 Zinc-binding dehydrogenase 151 268 9.6E-21 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 Gene3D G3DSA:3.40.50.720 142 292 1.1E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13045 a6b2e007960eb3fd504e6745672f1cfc 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 1.1E-8 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 Pfam PF00672 HAMP domain 170 239 8.2E-11 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 SMART SM00304 189 243 0.0067 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 Gene3D G3DSA:1.10.287.130 237 306 9.4E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 SUPERFAMILY SSF47384 227 311 3.92E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 PANTHER PTHR24423 20 36 1.5E-56 T 25-04-2016 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 PANTHER PTHR24423 183 451 1.5E-56 T 25-04-2016 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 Gene3D G3DSA:3.30.565.10 315 451 2.2E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 8.4E-5 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 8.4E-5 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 SUPERFAMILY SSF55874 314 452 6.42E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 SMART SM00387 350 455 4.8E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 SMART SM00388 244 310 5.4E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 310 5.4E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS17485 79f098649136020ac6dfbce7624d190f 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 450 1.3E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12510 36d9a383b4127407cc56179c9aaff60e 318 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 2.7E-11 T 25-04-2016 IPR032623 FecR, N-terminal SMD_RS12510 36d9a383b4127407cc56179c9aaff60e 318 Pfam PF04773 FecR protein 121 204 3.1E-15 T 25-04-2016 IPR006860 FecR protein SMD_RS12510 36d9a383b4127407cc56179c9aaff60e 318 PANTHER PTHR30273 4 317 6.0E-41 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS12510 36d9a383b4127407cc56179c9aaff60e 318 PIRSF PIRSF018266 1 317 2.6E-64 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS12510 36d9a383b4127407cc56179c9aaff60e 318 PANTHER PTHR30273:SF2 4 317 6.0E-41 T 25-04-2016 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 9.7E-136 T 25-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 156.43 T 25-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 SUPERFAMILY SSF56059 124 311 2.94E-54 T 25-04-2016 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 PANTHER PTHR21621:SF4 1 315 8.1E-146 T 25-04-2016 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 Gene3D G3DSA:3.30.470.20 193 301 6.8E-47 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 298 6.6E-73 T 25-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 Gene3D G3DSA:3.30.1490.20 138 192 6.0E-26 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 Gene3D G3DSA:3.40.50.20 3 130 1.4E-46 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 6.5E-39 T 25-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 PANTHER PTHR21621 1 315 8.1E-146 T 25-04-2016 SMD_RS16790 dd47d156083cb1d060c3099ec6f62650 315 SUPERFAMILY SSF52440 3 123 1.5E-38 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS08940 0be08c67943e601f9f0c61d613c52e5e 702 Pfam PF04185 Phosphoesterase family 44 440 3.8E-117 T 25-04-2016 IPR007312 Phosphoesterase GO:0016788 SMD_RS08940 0be08c67943e601f9f0c61d613c52e5e 702 PANTHER PTHR31956:SF1 4 518 5.9E-143 T 25-04-2016 SMD_RS08940 0be08c67943e601f9f0c61d613c52e5e 702 PANTHER PTHR31956 4 518 5.9E-143 T 25-04-2016 SMD_RS08940 0be08c67943e601f9f0c61d613c52e5e 702 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 7 693 2.3E-253 T 25-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 SMD_RS08940 0be08c67943e601f9f0c61d613c52e5e 702 Pfam PF05506 Domain of unknown function (DUF756) 510 594 3.0E-15 T 25-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 SMD_RS08940 0be08c67943e601f9f0c61d613c52e5e 702 Pfam PF05506 Domain of unknown function (DUF756) 599 669 1.2E-8 T 25-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 SUPERFAMILY SSF52025 147 271 1.83E-5 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 PANTHER PTHR12147 504 562 2.7E-256 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 PANTHER PTHR12147 252 488 2.7E-256 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 PANTHER PTHR12147 1 220 2.7E-256 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 Pfam PF04389 Peptidase family M28 314 531 5.0E-48 T 25-04-2016 IPR007484 Peptidase M28 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 SUPERFAMILY SSF53187 42 92 1.91E-64 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 SUPERFAMILY SSF53187 298 542 1.91E-64 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 PANTHER PTHR12147:SF20 504 562 2.7E-256 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 PANTHER PTHR12147:SF20 252 488 2.7E-256 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 PANTHER PTHR12147:SF20 1 220 2.7E-256 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 Gene3D G3DSA:3.40.630.10 35 99 2.7E-61 T 25-04-2016 SMD_RS01975 c1b6e4961dc34c2d1765e1ed9e640922 569 Gene3D G3DSA:3.40.630.10 306 549 2.7E-61 T 25-04-2016 SMD_RS13920 5f962f30eae7742458c99b01632d4c01 440 PANTHER PTHR35243 44 439 5.9E-219 T 25-04-2016 SMD_RS13920 5f962f30eae7742458c99b01632d4c01 440 PANTHER PTHR35243:SF12 44 439 5.9E-219 T 25-04-2016 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PANTHER PTHR10422:SF26 32 613 0.0 T 25-04-2016 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 2.0E-97 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 25-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 PANTHER PTHR10422 32 613 0.0 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 25-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 SUPERFAMILY SSF81442 42 558 3.01E-182 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 503 3.1E-138 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS06360 2a08548809b12a7b042dbea8a2e2c7e3 665 Gene3D G3DSA:1.20.210.10 39 588 2.3E-194 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 SUPERFAMILY SSF160996 192 338 5.1E-36 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 Gene3D G3DSA:1.10.8.260 271 321 1.6E-12 T 25-04-2016 IPR023166 HI0933 insert-like domain SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PANTHER PTHR10617:SF103 330 391 3.2E-124 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PANTHER PTHR10617:SF103 5 287 3.2E-124 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.6E-7 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 2.6E-7 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 391 3.8E-126 T 25-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 Gene3D G3DSA:3.50.50.60 5 188 1.2E-52 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 Gene3D G3DSA:3.50.50.60 339 391 1.2E-52 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 2.0E-6 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 2.0E-6 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-6 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 SUPERFAMILY SSF51905 337 392 8.35E-61 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 SUPERFAMILY SSF51905 5 190 8.35E-61 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 Pfam PF03486 HI0933-like protein 6 391 1.9E-146 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PANTHER PTHR10617 330 391 3.2E-124 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 PANTHER PTHR10617 5 287 3.2E-124 T 25-04-2016 SMD_RS09590 a043d231c2fbab5fd466aa67386adb05 394 Gene3D G3DSA:2.40.30.10 190 270 1.9E-27 T 25-04-2016 SMD_RS10475 343521b88f7e083cd91c2627bd1fe32f 133 SUPERFAMILY SSF54593 2 127 4.95E-23 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS10475 343521b88f7e083cd91c2627bd1fe32f 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 121 4.3E-6 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS10475 343521b88f7e083cd91c2627bd1fe32f 133 Gene3D G3DSA:3.10.180.10 1 125 3.5E-30 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS10475 343521b88f7e083cd91c2627bd1fe32f 133 PANTHER PTHR35006 1 128 3.8E-45 T 25-04-2016 SMD_RS05365 9bff2d7fe84cbd8d59414bb8b00224fc 181 Gene3D G3DSA:1.10.340.30 122 165 6.7E-4 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS05365 9bff2d7fe84cbd8d59414bb8b00224fc 181 Gene3D G3DSA:1.10.340.30 4 121 2.9E-44 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS05365 9bff2d7fe84cbd8d59414bb8b00224fc 181 Pfam PF03352 Methyladenine glycosylase 12 120 6.9E-40 T 25-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SMD_RS05365 9bff2d7fe84cbd8d59414bb8b00224fc 181 SUPERFAMILY SSF48150 4 168 8.03E-53 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMD_RS05365 9bff2d7fe84cbd8d59414bb8b00224fc 181 PANTHER PTHR30037 1 179 1.1E-80 T 25-04-2016 SMD_RS05365 9bff2d7fe84cbd8d59414bb8b00224fc 181 PANTHER PTHR30037:SF4 1 179 1.1E-80 T 25-04-2016 SMD_RS20880 a58059f18ed9f1db4ff4093f4ae389d7 320 Gene3D G3DSA:3.40.50.1100 75 314 3.1E-62 T 25-04-2016 SMD_RS20880 a58059f18ed9f1db4ff4093f4ae389d7 320 PANTHER PTHR10314:SF36 10 317 5.9E-121 T 25-04-2016 SMD_RS20880 a58059f18ed9f1db4ff4093f4ae389d7 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 307 3.5E-73 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS20880 a58059f18ed9f1db4ff4093f4ae389d7 320 PANTHER PTHR10314 10 317 5.9E-121 T 25-04-2016 SMD_RS20880 a58059f18ed9f1db4ff4093f4ae389d7 320 SUPERFAMILY SSF53686 10 314 4.98E-82 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS20880 a58059f18ed9f1db4ff4093f4ae389d7 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 25-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SMART SM00091 636 704 3.0E-4 T 25-04-2016 IPR000014 PAS domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PANTHER PTHR24423 9 33 1.6E-231 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SUPERFAMILY SSF55874 838 1001 2.75E-39 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Gene3D G3DSA:3.30.450.20 627 750 2.8E-13 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Pfam PF12860 PAS fold 642 756 3.3E-43 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Gene3D G3DSA:3.40.50.2300 1023 1144 2.2E-20 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PANTHER PTHR24423:SF439 634 1145 1.6E-231 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SUPERFAMILY SSF52172 1029 1145 2.99E-20 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PANTHER PTHR24423 51 98 1.6E-231 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PANTHER PTHR24423 634 1145 1.6E-231 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PANTHER PTHR24423:SF439 51 98 1.6E-231 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PANTHER PTHR24423:SF439 9 33 1.6E-231 T 25-04-2016 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Gene3D G3DSA:3.30.565.10 856 1001 2.7E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Pfam PF00072 Response regulator receiver domain 1032 1139 3.2E-11 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Gene3D G3DSA:1.10.287.130 775 844 6.3E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1000 9.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PRINTS PR00344 Bacterial sensor protein C-terminal signature 928 942 9.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PRINTS PR00344 Bacterial sensor protein C-terminal signature 946 956 9.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 981 9.6E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 893 1000 3.9E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SMART SM00448 1030 1141 3.4E-16 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SUPERFAMILY SSF55785 627 749 1.17E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 Pfam PF00512 His Kinase A (phospho-acceptor) domain 782 848 1.6E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SUPERFAMILY SSF47384 766 849 2.35E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SMART SM00387 892 1003 6.7E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 635 758 4.4E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS21585 6d747424a3df6f70550a999035595ae8 1152 SMART SM00388 782 848 3.8E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 Gene3D G3DSA:3.30.450.20 19 121 1.0E-19 T 25-04-2016 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 PANTHER PTHR24423 7 373 1.1E-115 T 25-04-2016 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 370 6.5E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 Pfam PF13426 PAS domain 22 121 6.5E-11 T 25-04-2016 IPR000014 PAS domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 209 3.3E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 SMART SM00387 252 372 2.6E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 SUPERFAMILY SSF55785 20 131 2.74E-22 T 25-04-2016 IPR000014 PAS domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 128 1.8E-19 T 25-04-2016 IPR000014 PAS domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 PANTHER PTHR24423:SF527 7 373 1.1E-115 T 25-04-2016 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 Gene3D G3DSA:3.30.565.10 197 373 4.0E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 Gene3D G3DSA:1.10.287.130 141 196 1.7E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 SUPERFAMILY SSF55874 201 370 1.06E-32 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 315 1.6E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 329 1.6E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 350 1.6E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 1.6E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 SMART SM00388 144 211 1.2E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10160 3f0c7f7b883ad624b2105ca64ff436e4 378 SUPERFAMILY SSF47384 136 207 4.32E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 SUPERFAMILY SSF52279 359 558 7.06E-49 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 SUPERFAMILY SSF52279 589 611 7.06E-49 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 2.0E-26 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PRINTS PR00133 Glycosyl hydrolase family 3 signature 106 125 2.0E-26 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PRINTS PR00133 Glycosyl hydrolase family 3 signature 152 168 2.0E-26 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 2.0E-26 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PRINTS PR00133 Glycosyl hydrolase family 3 signature 76 92 2.0E-26 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 Gene3D G3DSA:3.20.20.300 18 340 1.8E-87 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 359 608 1.6E-52 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 Pfam PF14310 Fibronectin type III-like domain 641 706 2.4E-15 T 25-04-2016 IPR026891 Fibronectin type III-like domain SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PANTHER PTHR30620 19 52 0.0 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PANTHER PTHR30620 68 400 0.0 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PANTHER PTHR30620:SF36 422 723 0.0 T 25-04-2016 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PANTHER PTHR30620:SF36 19 52 0.0 T 25-04-2016 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PANTHER PTHR30620:SF36 68 400 0.0 T 25-04-2016 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 253 270 - T 25-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 SMART SM01217 641 709 1.1E-17 T 25-04-2016 IPR026891 Fibronectin type III-like domain SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 PANTHER PTHR30620 422 723 0.0 T 25-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 77 324 5.9E-36 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 SUPERFAMILY SSF51445 19 341 3.16E-83 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS13375 fa6ba2285e557177d4cb59b6d6236ff8 726 Gene3D G3DSA:3.40.50.1700 348 611 3.8E-64 T 25-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SMD_RS15790 304d379e842ec8e3fb765172eb0e29b6 179 PANTHER PTHR21666 41 178 1.5E-42 T 25-04-2016 SMD_RS15790 304d379e842ec8e3fb765172eb0e29b6 179 SUPERFAMILY SSF54001 49 178 3.92E-42 T 25-04-2016 SMD_RS15790 304d379e842ec8e3fb765172eb0e29b6 179 Pfam PF00877 NlpC/P60 family 69 176 2.1E-30 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS15790 304d379e842ec8e3fb765172eb0e29b6 179 Gene3D G3DSA:3.90.1720.10 50 178 2.9E-46 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 SUPERFAMILY SSF55874 297 437 3.41E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 PANTHER PTHR24423 178 425 3.6E-36 T 25-04-2016 SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 PANTHER PTHR24423 1 8 3.6E-36 T 25-04-2016 SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 SMART SM00387 335 439 1.3E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 Gene3D G3DSA:3.30.565.10 296 438 1.0E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 9.3E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.4E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 1.4E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 PANTHER PTHR24423:SF496 178 425 3.6E-36 T 25-04-2016 SMD_RS20490 eac001b81d7190cdb6c860b9215983da 439 PANTHER PTHR24423:SF496 1 8 3.6E-36 T 25-04-2016 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 Pfam PF04055 Radical SAM superfamily 181 355 2.6E-28 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 PANTHER PTHR11918 34 472 4.6E-200 T 25-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 181 201 - T 25-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 Pfam PF01938 TRAM domain 409 470 2.6E-17 T 25-04-2016 IPR002792 TRAM domain SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 34 470 1.9E-184 T 25-04-2016 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 SMART SM00729 177 397 1.1E-61 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 Gene3D G3DSA:3.80.30.20 176 409 2.5E-75 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 PANTHER PTHR11918:SF43 34 472 4.6E-200 T 25-04-2016 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 33 470 72.371 T 25-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 467 4.1E-146 T 25-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 Pfam PF00919 Uncharacterized protein family UPF0004 34 134 2.8E-28 T 25-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SMD_RS07465 6d3fc717640ba6fb127254ee5591602f 472 SUPERFAMILY SSF102114 154 402 2.09E-61 T 25-04-2016 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 SMART SM00965 67 118 5.5E-11 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 SUPERFAMILY SSF56935 684 826 1.16E-80 T 25-04-2016 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 SUPERFAMILY SSF56935 860 972 1.16E-80 T 25-04-2016 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 SUPERFAMILY SSF56935 157 586 1.16E-80 T 25-04-2016 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 Gene3D G3DSA:2.40.170.20 270 586 1.8E-79 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 Gene3D G3DSA:2.40.170.20 684 972 1.8E-79 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 Pfam PF07715 TonB-dependent Receptor Plug Domain 157 264 4.0E-11 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 Pfam PF00593 TonB dependent receptor 691 971 7.7E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 Gene3D G3DSA:2.170.130.10 160 269 6.1E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18160 6bff7497f8efc55d26dc39997bd1b7e2 972 PANTHER PTHR30442 4 875 3.1E-48 T 25-04-2016 SMD_RS13405 8b634808352687747eb9a67c38e24ae7 335 SUPERFAMILY SSF102198 67 331 1.7E-42 T 25-04-2016 SMD_RS13405 8b634808352687747eb9a67c38e24ae7 335 PANTHER PTHR34861 40 332 1.3E-24 T 25-04-2016 SMD_RS13405 8b634808352687747eb9a67c38e24ae7 335 Gene3D G3DSA:3.50.30.50 67 331 1.4E-50 T 25-04-2016 SMD_RS13405 8b634808352687747eb9a67c38e24ae7 335 Pfam PF04199 Putative cyclase 70 267 8.1E-31 T 25-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 455 556 1.3E-49 T 25-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 Gene3D G3DSA:3.50.50.60 14 289 7.5E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 Pfam PF13450 NAD(P)-binding Rossmann-like domain 20 65 7.9E-8 T 25-04-2016 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 SUPERFAMILY SSF54373 219 313 4.32E-37 T 25-04-2016 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 PANTHER PTHR10617 10 482 2.3E-243 T 25-04-2016 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 SUPERFAMILY SSF54862 459 557 7.82E-27 T 25-04-2016 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 SUPERFAMILY SSF51905 314 457 2.69E-52 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 SUPERFAMILY SSF51905 11 217 2.69E-52 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 PANTHER PTHR10617:SF107 10 482 2.3E-243 T 25-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 4.4E-8 T 25-04-2016 SMD_RS01035 e613d71e1d031f662d36161a55eed452 558 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 186 201 4.4E-8 T 25-04-2016 SMD_RS13360 99cbda654d74c5ce01a7e2c1d8dabe56 128 PIRSF PIRSF029394 1 128 4.9E-35 T 25-04-2016 IPR016918 Uncharacterised conserved protein UCP029394 SMD_RS13360 99cbda654d74c5ce01a7e2c1d8dabe56 128 Gene3D G3DSA:3.10.450.50 4 127 4.3E-40 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS13360 99cbda654d74c5ce01a7e2c1d8dabe56 128 Pfam PF14534 Domain of unknown function (DUF4440) 16 118 1.5E-8 T 25-04-2016 IPR027843 Domain of unknown function DUF4440 SMD_RS13360 99cbda654d74c5ce01a7e2c1d8dabe56 128 SUPERFAMILY SSF54427 6 125 6.12E-31 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS01910 cfa7068c2f49646f46db5b6ed84384cb 490 PANTHER PTHR21666 177 442 1.3E-60 T 25-04-2016 SMD_RS01910 cfa7068c2f49646f46db5b6ed84384cb 490 PANTHER PTHR21666:SF221 177 442 1.3E-60 T 25-04-2016 SMD_RS01910 cfa7068c2f49646f46db5b6ed84384cb 490 Pfam PF01551 Peptidase family M23 325 421 8.0E-34 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS01910 cfa7068c2f49646f46db5b6ed84384cb 490 SUPERFAMILY SSF51261 177 422 3.14E-72 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS01910 cfa7068c2f49646f46db5b6ed84384cb 490 Pfam PF04225 Opacity-associated protein A LysM-like domain 101 169 2.1E-6 T 25-04-2016 IPR007340 Opacity-associated protein A SMD_RS01910 cfa7068c2f49646f46db5b6ed84384cb 490 Gene3D G3DSA:2.70.70.10 284 424 1.9E-48 T 25-04-2016 SMD_RS00925 4ee3002d80f186fdefd6450028df12e4 350 PANTHER PTHR30203 12 342 2.3E-26 T 25-04-2016 SMD_RS00925 4ee3002d80f186fdefd6450028df12e4 350 Pfam PF02321 Outer membrane efflux protein 168 331 1.6E-12 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS00925 4ee3002d80f186fdefd6450028df12e4 350 Pfam PF02321 Outer membrane efflux protein 23 142 3.1E-6 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS00925 4ee3002d80f186fdefd6450028df12e4 350 Gene3D G3DSA:1.20.1600.10 22 342 2.8E-30 T 25-04-2016 SMD_RS00925 4ee3002d80f186fdefd6450028df12e4 350 SUPERFAMILY SSF56954 8 342 1.83E-41 T 25-04-2016 SMD_RS00925 4ee3002d80f186fdefd6450028df12e4 350 PANTHER PTHR30203:SF1 12 342 2.3E-26 T 25-04-2016 SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 1.3E-65 T 25-04-2016 SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.4E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.4E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 Gene3D G3DSA:3.40.50.720 4 250 7.0E-84 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 SUPERFAMILY SSF51735 4 251 1.46E-79 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.4E-40 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-40 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.4E-40 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-40 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-40 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-40 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PANTHER PTHR24322 159 191 9.0E-49 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 PANTHER PTHR24322 13 143 9.0E-49 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS13345 01040ef22e5040854196d7d763d20a3f 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 3.4E-56 T 25-04-2016 SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 Gene3D G3DSA:3.40.50.720 5 242 4.8E-77 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 191 2.4E-5 T 25-04-2016 SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PANTHER PTHR24322:SF328 155 187 8.1E-46 T 25-04-2016 SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PANTHER PTHR24322:SF328 9 139 8.1E-46 T 25-04-2016 SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 SUPERFAMILY SSF51735 4 242 2.74E-75 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PANTHER PTHR24322 155 187 8.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PANTHER PTHR24322 9 139 8.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.3E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.3E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.3E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 7 243 3.2E-122 T 25-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS21240 4070f5d2429ac62c648613abbe91dcd3 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.4E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19415 99eb18107cf28efd01e21700d0c43d7e 186 Pfam PF02469 Fasciclin domain 51 185 4.2E-34 T 25-04-2016 IPR000782 FAS1 domain SMD_RS19415 99eb18107cf28efd01e21700d0c43d7e 186 SMART SM00554 75 186 1.0E-25 T 25-04-2016 IPR000782 FAS1 domain SMD_RS19415 99eb18107cf28efd01e21700d0c43d7e 186 SUPERFAMILY SSF82153 41 185 2.09E-40 T 25-04-2016 IPR000782 FAS1 domain SMD_RS19415 99eb18107cf28efd01e21700d0c43d7e 186 Gene3D G3DSA:2.30.180.10 39 185 4.2E-40 T 25-04-2016 IPR000782 FAS1 domain SMD_RS19415 99eb18107cf28efd01e21700d0c43d7e 186 PANTHER PTHR10900 22 185 5.8E-50 T 25-04-2016 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 Pfam PF07971 Glycosyl hydrolase family 92 283 763 3.3E-170 T 25-04-2016 IPR012939 Glycosyl hydrolase family 92 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 PANTHER PTHR12143:SF22 15 782 3.7E-205 T 25-04-2016 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 Gene3D G3DSA:2.70.98.10 40 359 3.6E-92 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 4 768 5.1E-206 T 25-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 Gene3D G3DSA:1.20.1610.10 478 627 3.7E-65 T 25-04-2016 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 PANTHER PTHR12143 15 782 3.7E-205 T 25-04-2016 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 SUPERFAMILY SSF48208 302 749 2.72E-31 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 Gene3D G3DSA:1.20.1050.60 383 477 1.2E-35 T 25-04-2016 SMD_RS12450 f4f78fcf7eecbae762d4e4283e1dcbb8 783 Gene3D G3DSA:3.30.2080.10 628 774 6.7E-66 T 25-04-2016 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 Gene3D G3DSA:3.30.160.160 356 399 2.0E-6 T 25-04-2016 IPR010879 Domain of unknown function DUF1508 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 PANTHER PTHR10055:SF11 1 336 2.8E-191 T 25-04-2016 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 Pfam PF07411 Domain of unknown function (DUF1508) 362 402 7.3E-5 T 25-04-2016 IPR010879 Domain of unknown function DUF1508 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 332 5.4E-87 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 SUPERFAMILY SSF160113 354 405 9.16E-11 T 25-04-2016 IPR010879 Domain of unknown function DUF1508 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 SUPERFAMILY SSF52374 4 332 7.51E-76 T 25-04-2016 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 Gene3D G3DSA:3.40.50.620 3 210 2.9E-75 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.4E-19 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 2.4E-19 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.4E-19 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.4E-19 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 PANTHER PTHR10055 1 336 2.8E-191 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 3.8E-57 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 35.769 T 25-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SMD_RS01620 5f8a7567764d5ceead8a07e6c8735c3c 431 Gene3D G3DSA:1.10.240.10 211 298 5.0E-28 T 25-04-2016 SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 SUPERFAMILY SSF50494 645 682 2.62E-24 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 SUPERFAMILY SSF50494 212 298 2.62E-24 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 SUPERFAMILY SSF50494 28 87 2.62E-24 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 Gene3D G3DSA:2.40.10.10 643 702 2.6E-15 T 25-04-2016 SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 Gene3D G3DSA:2.40.10.10 585 611 2.6E-15 T 25-04-2016 SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 PANTHER PTHR38469:SF1 4 719 3.5E-180 T 25-04-2016 SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 PANTHER PTHR38469 4 719 3.5E-180 T 25-04-2016 SMD_RS04425 f651b21b22b11fb65cf1e3f23b0a2a06 721 Pfam PF10459 Peptidase S46 22 718 7.5E-264 T 25-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 SUPERFAMILY SSF52172 9 134 1.99E-40 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 PANTHER PTHR26402 9 231 1.5E-83 T 25-04-2016 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 Gene3D G3DSA:1.10.10.10 134 229 2.5E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 PANTHER PTHR26402:SF292 9 231 1.5E-83 T 25-04-2016 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 Gene3D G3DSA:3.40.50.2300 5 131 2.4E-40 T 25-04-2016 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.6E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 Pfam PF00072 Response regulator receiver domain 11 121 1.1E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 SMART SM00862 155 229 6.3E-16 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 SUPERFAMILY SSF46894 130 229 7.65E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS03675 d7384db0ec93ad4d6927b09ff72b30e6 237 SMART SM00448 9 121 3.1E-41 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 SUPERFAMILY SSF50249 3 191 6.57E-51 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 Gene3D G3DSA:2.40.50.140 1 122 2.5E-51 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 Gene3D G3DSA:2.40.50.140 171 191 2.5E-51 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 PANTHER PTHR10302 1 191 4.0E-51 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 191 9.8E-50 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 Pfam PF00436 Single-strand binding protein family 5 108 4.2E-39 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SMD_RS05815 b7b60627fa259d5c94cf2276529f98b7 191 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 36.253 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMD_RS05835 f2897d1396a6f8dc3bf59066c70bb618 191 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 42 173 3.1E-27 T 25-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 SMD_RS13385 8a59fa51a5e852a5760f46a38da2ec5f 234 SMART SM00342 145 227 1.1E-11 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13385 8a59fa51a5e852a5760f46a38da2ec5f 234 SUPERFAMILY SSF46689 128 178 7.62E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13385 8a59fa51a5e852a5760f46a38da2ec5f 234 Pfam PF12833 Helix-turn-helix domain 151 221 6.2E-13 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13385 8a59fa51a5e852a5760f46a38da2ec5f 234 Gene3D G3DSA:1.10.10.60 124 185 8.8E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS16080 94fa39bdb2fea3434003dd45ac56d397 196 PANTHER PTHR30221 8 184 2.7E-59 T 25-04-2016 SMD_RS16080 94fa39bdb2fea3434003dd45ac56d397 196 Pfam PF00924 Mechanosensitive ion channel 62 183 1.1E-13 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMD_RS16080 94fa39bdb2fea3434003dd45ac56d397 196 Gene3D G3DSA:2.30.30.60 123 180 9.6E-8 T 25-04-2016 SMD_RS16080 94fa39bdb2fea3434003dd45ac56d397 196 SUPERFAMILY SSF50182 108 182 5.56E-10 T 25-04-2016 IPR010920 LSM domain SMD_RS16080 94fa39bdb2fea3434003dd45ac56d397 196 PANTHER PTHR30221:SF8 8 184 2.7E-59 T 25-04-2016 SMD_RS16445 c112f135146f962491f2b8abb63cdc06 160 SUPERFAMILY SSF52833 1 157 1.09E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS16445 c112f135146f962491f2b8abb63cdc06 160 Gene3D G3DSA:3.40.30.10 1 158 2.9E-60 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS16445 c112f135146f962491f2b8abb63cdc06 160 Pfam PF08534 Redoxin 5 155 1.9E-32 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMD_RS16445 c112f135146f962491f2b8abb63cdc06 160 PANTHER PTHR10430 1 158 5.6E-75 T 25-04-2016 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 Gene3D G3DSA:3.30.450.20 184 307 7.7E-20 T 25-04-2016 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 Pfam PF07536 HWE histidine kinase 323 392 4.8E-15 T 25-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 SMART SM00086 268 310 9.6E-6 T 25-04-2016 IPR001610 PAC motif SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 Gene3D G3DSA:3.30.450.20 66 183 6.4E-15 T 25-04-2016 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 SUPERFAMILY SSF55785 65 164 4.95E-6 T 25-04-2016 IPR000014 PAS domain SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 PANTHER PTHR41523 280 519 4.7E-32 T 25-04-2016 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 249 316 1.8E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 SMART SM00911 323 404 1.9E-20 T 25-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 SUPERFAMILY SSF55785 178 307 1.05E-16 T 25-04-2016 IPR000014 PAS domain SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 Pfam PF08448 PAS fold 77 172 1.0E-6 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS12485 7cc9d99832f01d463d4cc919200d7969 528 Pfam PF08448 PAS fold 197 311 8.2E-11 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS05770 2fdfd64362a06011cc00a7d7ebc9e898 684 PANTHER PTHR35803 7 684 0.0 T 25-04-2016 SMD_RS05770 2fdfd64362a06011cc00a7d7ebc9e898 684 SUPERFAMILY SSF51445 318 567 1.68E-6 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS05770 2fdfd64362a06011cc00a7d7ebc9e898 684 Pfam PF10566 Glycoside hydrolase 97 287 577 4.1E-107 T 25-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain SMD_RS05770 2fdfd64362a06011cc00a7d7ebc9e898 684 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 580 680 6.2E-27 T 25-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain SMD_RS05770 2fdfd64362a06011cc00a7d7ebc9e898 684 PANTHER PTHR35803:SF1 7 684 0.0 T 25-04-2016 SMD_RS05770 2fdfd64362a06011cc00a7d7ebc9e898 684 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 36 282 5.8E-68 T 25-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 PANTHER PTHR11751:SF407 75 459 5.4E-55 T 25-04-2016 SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 SMART SM00345 32 91 9.1E-17 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 91 2.8E-16 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 SUPERFAMILY SSF53383 99 460 1.88E-69 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 PANTHER PTHR11751 75 459 5.4E-55 T 25-04-2016 SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 Gene3D G3DSA:3.40.640.10 136 355 4.3E-55 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 SUPERFAMILY SSF46785 25 93 3.77E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 Pfam PF00155 Aminotransferase class I and II 102 448 7.1E-14 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS20655 320d9705f85562e170dae43ba01c5175 471 Gene3D G3DSA:1.10.10.10 24 92 5.3E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 PANTHER PTHR30195:SF12 7 533 7.8E-130 T 25-04-2016 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 Pfam PF02384 N-6 DNA Methylase 168 511 2.0E-58 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 Pfam PF12161 HsdM N-terminal domain 8 149 2.1E-21 T 25-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 PANTHER PTHR30195 7 533 7.8E-130 T 25-04-2016 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 189 205 2.4E-20 T 25-04-2016 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 2.4E-20 T 25-04-2016 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 343 367 2.4E-20 T 25-04-2016 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 327 2.4E-20 T 25-04-2016 SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 Gene3D G3DSA:3.40.50.150 192 233 4.5E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 Gene3D G3DSA:3.40.50.150 269 449 4.5E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 SUPERFAMILY SSF53335 81 519 2.9E-114 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS09830 674deea246cbda7fa19742d9e5490d3d 560 SUPERFAMILY SSF53335 7 47 2.9E-114 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 SMART SM00479 2 175 3.7E-43 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 PANTHER PTHR30231:SF0 1 235 1.0E-101 T 25-04-2016 SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 177 2.2E-58 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 Gene3D G3DSA:3.30.420.10 1 175 3.2E-59 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 PANTHER PTHR30231 1 235 1.0E-101 T 25-04-2016 SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 Pfam PF00929 Exonuclease 4 164 5.3E-30 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 SUPERFAMILY SSF53098 1 176 2.28E-49 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS04955 bd923b25c4b767636d68edcc1fea24d3 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 233 3.7E-94 T 25-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 PANTHER PTHR38731:SF1 66 244 8.8E-14 T 25-04-2016 SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 SUPERFAMILY SSF54106 49 96 2.35E-6 T 25-04-2016 IPR018392 LysM domain SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 Pfam PF04773 FecR protein 139 243 5.8E-13 T 25-04-2016 IPR006860 FecR protein SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 Gene3D G3DSA:3.10.350.10 50 96 1.3E-6 T 25-04-2016 IPR018392 LysM domain SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 PANTHER PTHR38731 66 244 8.8E-14 T 25-04-2016 SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 Pfam PF01476 LysM domain 50 96 1.9E-8 T 25-04-2016 IPR018392 LysM domain SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 PIRSF PIRSF029644 11 547 2.3E-120 T 25-04-2016 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 SMD_RS15935 f8893beae292a4fdf1b0174f27c43ef8 566 SMART SM00257 49 96 0.0034 T 25-04-2016 IPR018392 LysM domain SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 PANTHER PTHR30158 1 393 1.5E-159 T 25-04-2016 SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 Pfam PF00529 HlyD membrane-fusion protein of T1SS 289 355 6.5E-7 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 SUPERFAMILY SSF111369 48 293 7.32E-80 T 25-04-2016 SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 Gene3D G3DSA:2.40.50.100 62 94 2.1E-25 T 25-04-2016 SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 Gene3D G3DSA:2.40.50.100 169 204 2.1E-25 T 25-04-2016 SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 288 9.2E-16 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 370 2.9E-101 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS18940 79393614460b634d321fa5d37d8bf3df 394 PANTHER PTHR30158:SF3 1 393 1.5E-159 T 25-04-2016 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 1.8E-102 T 25-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 SUPERFAMILY SSF46589 12 99 4.08E-20 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 Gene3D G3DSA:3.30.930.10 9 330 2.0E-126 T 25-04-2016 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 SUPERFAMILY SSF55681 92 330 1.17E-77 T 25-04-2016 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 47.961 T 25-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 PANTHER PTHR11538 92 330 3.2E-103 T 25-04-2016 SMD_RS15325 0e1ebed35fa0ec514b387940b65e3741 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.1E-22 T 25-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 PANTHER PTHR11938:SF64 6 136 1.0E-51 T 25-04-2016 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 Pfam PF04060 Putative Fe-S cluster 15 47 6.9E-15 T 25-04-2016 IPR007202 4Fe-4S domain GO:0051536 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 136 3.2E-65 T 25-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 PANTHER PTHR11938 6 136 1.0E-51 T 25-04-2016 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 Gene3D G3DSA:3.30.70.20 93 134 6.5E-13 T 25-04-2016 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 Gene3D G3DSA:3.30.70.20 18 92 9.6E-10 T 25-04-2016 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 Pfam PF14697 4Fe-4S dicluster domain 80 133 8.2E-16 T 25-04-2016 SMD_RS16000 bbf2b6012f8e96477cdf3c3ec37c73eb 137 SUPERFAMILY SSF54862 10 136 5.29E-28 T 25-04-2016 SMD_RS20945 17f8d0b4e9f8623545a4338f06a0abcd 394 SUPERFAMILY SSF52317 49 199 6.64E-5 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 7 235 6.4E-24 T 25-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 Pfam PF03309 Type III pantothenate kinase 5 193 4.2E-38 T 25-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 PANTHER PTHR34265 1 237 2.0E-46 T 25-04-2016 SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 SUPERFAMILY SSF53067 114 237 1.25E-24 T 25-04-2016 SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 241 15.164 T 25-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 Gene3D G3DSA:3.30.420.40 86 239 6.4E-36 T 25-04-2016 SMD_RS01540 c1a973f0038d49100a644bea0720fd5e 243 SUPERFAMILY SSF53067 5 110 4.34E-19 T 25-04-2016 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.8E-37 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.8E-37 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.8E-37 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.8E-37 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.8E-37 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 4.0E-120 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PANTHER PTHR30531 9 362 2.5E-130 T 25-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 354 4.7E-125 T 25-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 Gene3D G3DSA:3.40.1690.10 219 356 1.7E-59 T 25-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 PANTHER PTHR30531:SF0 9 362 2.5E-130 T 25-04-2016 SMD_RS10775 f546f3f25b07b7e8f73a767fe19ba9bb 376 SUPERFAMILY SSF160544 245 352 3.66E-38 T 25-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SMD_RS20735 f1384221fab1889a2029c0c6d1b4ce0c 297 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 25-04-2016 IPR030470 UbiA prenyltransferase conserved site SMD_RS20735 f1384221fab1889a2029c0c6d1b4ce0c 297 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 17 294 8.2E-107 T 25-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 SMD_RS20735 f1384221fab1889a2029c0c6d1b4ce0c 297 Pfam PF01040 UbiA prenyltransferase family 35 279 5.6E-61 T 25-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SMD_RS20735 f1384221fab1889a2029c0c6d1b4ce0c 297 PANTHER PTHR11048 16 297 1.3E-82 T 25-04-2016 SMD_RS20735 f1384221fab1889a2029c0c6d1b4ce0c 297 PANTHER PTHR11048:SF7 16 297 1.3E-82 T 25-04-2016 SMD_RS20735 f1384221fab1889a2029c0c6d1b4ce0c 297 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 12 295 28.719 T 25-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 Gene3D G3DSA:3.40.190.10 180 270 4.0E-25 T 25-04-2016 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 8.5E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 Gene3D G3DSA:1.10.10.10 7 83 3.2E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 PANTHER PTHR30419 1 297 2.7E-115 T 25-04-2016 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 Gene3D G3DSA:3.40.190.10 96 179 3.3E-22 T 25-04-2016 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 SUPERFAMILY SSF53850 94 298 3.71E-50 T 25-04-2016 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 Pfam PF03466 LysR substrate binding domain 94 296 2.8E-52 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 PANTHER PTHR30419:SF0 1 297 2.7E-115 T 25-04-2016 SMD_RS11835 21319f1fef9f6c3fa811120062826d0f 300 SUPERFAMILY SSF46785 9 115 5.94E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 PANTHER PTHR20941 1 160 3.7E-64 T 25-04-2016 SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 135 5.9E-35 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 PANTHER PTHR20941:SF10 1 160 3.7E-64 T 25-04-2016 SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 SUPERFAMILY SSF55083 1 145 6.67E-50 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 135 1.4E-43 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS09065 4f677f4705d201a1b4cb82d4f23b1bdf 161 Gene3D G3DSA:3.30.70.560 4 151 2.9E-53 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS19290 cdf60a9ba9fce279da790fd254a5b10d 494 Gene3D G3DSA:3.20.20.80 79 196 1.4E-8 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS19290 cdf60a9ba9fce279da790fd254a5b10d 494 SUPERFAMILY SSF51445 81 241 1.73E-13 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS19290 cdf60a9ba9fce279da790fd254a5b10d 494 Pfam PF14488 Domain of unknown function (DUF4434) 23 191 3.9E-21 T 25-04-2016 IPR027849 Protein of unknown function DUF4434 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 309 1.6E-33 T 25-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 Gene3D G3DSA:3.20.20.70 2 285 5.4E-69 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 326 36.776 T 25-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 PANTHER PTHR22960 4 281 4.4E-110 T 25-04-2016 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 SMART SM00729 13 216 2.4E-4 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 1.4E-99 T 25-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 25-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 Pfam PF04055 Radical SAM superfamily 18 177 4.2E-26 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 Pfam PF13353 4Fe-4S single cluster domain 20 103 2.3E-5 T 25-04-2016 SMD_RS12770 e5127404028153a58f15ed889c018a23 326 SUPERFAMILY SSF102114 4 275 2.09E-69 T 25-04-2016 SMD_RS21455 aece4343af2eff4c005a290a3a167638 404 Gene3D G3DSA:3.40.50.2000 1 244 7.7E-57 T 25-04-2016 SMD_RS21455 aece4343af2eff4c005a290a3a167638 404 SUPERFAMILY SSF53756 1 402 2.94E-86 T 25-04-2016 SMD_RS21455 aece4343af2eff4c005a290a3a167638 404 PANTHER PTHR11926:SF394 1 399 9.1E-60 T 25-04-2016 SMD_RS21455 aece4343af2eff4c005a290a3a167638 404 PANTHER PTHR11926 1 399 9.1E-60 T 25-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 SMD_RS21455 aece4343af2eff4c005a290a3a167638 404 Gene3D G3DSA:3.40.50.2000 245 378 7.1E-12 T 25-04-2016 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 131 290 3.0E-63 T 25-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 269 277 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 Gene3D G3DSA:3.40.50.720 148 273 1.1E-45 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PANTHER PTHR10025 1 289 6.6E-156 T 25-04-2016 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 41 63 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 117 138 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 248 264 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 265 283 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 162 182 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 82 109 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 213 242 3.5E-82 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 SUPERFAMILY SSF53223 10 129 1.15E-36 T 25-04-2016 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 SUPERFAMILY SSF51735 130 289 6.17E-46 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 Hamap MF_01576 Bifunctional protein FolD [folD]. 10 292 36.866 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 12 128 5.8E-35 T 25-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 Gene3D G3DSA:3.40.192.10 14 147 4.4E-45 T 25-04-2016 SMD_RS09805 f6808ff236af4ecbc04946a93b74bc07 292 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 83 108 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 SMART SM00382 634 923 0.0025 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 22.576 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:1.20.1580.10 695 821 8.8E-54 T 25-04-2016 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:1.20.1580.10 409 479 9.3E-52 T 25-04-2016 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:1.20.1580.10 93 131 9.3E-52 T 25-04-2016 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:1.20.1580.10 253 286 9.3E-52 T 25-04-2016 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 PANTHER PTHR32282:SF2 2 963 0.0 T 25-04-2016 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:3.30.1490.20 202 243 1.5E-24 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:3.30.1490.20 132 155 1.5E-24 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:3.40.50.300 822 942 4.1E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:3.40.50.300 604 681 4.1E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:3.40.50.300 480 598 1.9E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:3.40.50.300 6 53 1.9E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 SUPERFAMILY SSF52540 616 915 7.61E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 Gene3D G3DSA:1.10.8.280 289 408 1.6E-42 T 25-04-2016 SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 SUPERFAMILY SSF52540 3 206 3.36E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 SUPERFAMILY SSF52540 432 571 3.36E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06230 2fc08db6e8f788fd1555f915c4855683 997 PANTHER PTHR32282 2 963 0.0 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Pfam PF00593 TonB dependent receptor 641 989 2.6E-23 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 PANTHER PTHR30069:SF7 41 320 4.1E-74 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 PANTHER PTHR30069:SF7 355 893 4.1E-74 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 SUPERFAMILY SSF56935 43 245 3.11E-83 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 SUPERFAMILY SSF56935 351 670 3.11E-83 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 SUPERFAMILY SSF56935 810 992 3.11E-83 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 SUPERFAMILY SSF56935 725 774 3.11E-83 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 59 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.40.170.20 433 474 7.0E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.40.170.20 192 260 7.0E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.40.170.20 716 773 7.0E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.40.170.20 806 992 7.0E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.40.170.20 350 393 7.0E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.40.170.20 526 674 7.0E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 185 7.5E-21 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 Gene3D G3DSA:2.170.130.10 45 191 1.9E-30 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 PANTHER PTHR30069 41 320 4.1E-74 T 25-04-2016 SMD_RS15730 fd69c32328270b2145739a05d78e71eb 992 PANTHER PTHR30069 355 893 4.1E-74 T 25-04-2016 SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 Gene3D G3DSA:2.60.300.12 2 96 2.9E-28 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 PANTHER PTHR10072 1 111 4.3E-41 T 25-04-2016 SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 SUPERFAMILY SSF89360 1 96 3.53E-26 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 PANTHER PTHR10072:SF48 1 111 4.3E-41 T 25-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 6.4E-16 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 25-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SMD_RS14255 ca22f398367009d8fcc85fe599759203 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 1.1E-31 T 25-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 SUPERFAMILY SSF56935 378 582 1.61E-77 T 25-04-2016 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 SUPERFAMILY SSF56935 626 974 1.61E-77 T 25-04-2016 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 SUPERFAMILY SSF56935 122 333 1.61E-77 T 25-04-2016 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 Gene3D G3DSA:2.40.170.20 256 487 3.6E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 Gene3D G3DSA:2.40.170.20 519 974 3.6E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 Pfam PF00593 TonB dependent receptor 702 974 7.9E-25 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 252 1.3E-9 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 Gene3D G3DSA:2.170.130.10 144 255 9.7E-13 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 SMART SM00965 55 105 4.4E-7 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS08930 cacbac8e40e26d021c2c9c6b1e07f585 977 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 130 973 3.3E-115 T 25-04-2016 IPR010104 Bacterial TonB-dependent receptor SMD_RS16740 6cdcbe7987a4cbecb68a7b38c45d6b63 187 PANTHER PTHR11839 8 184 7.3E-82 T 25-04-2016 SMD_RS16740 6cdcbe7987a4cbecb68a7b38c45d6b63 187 Gene3D G3DSA:3.90.79.10 24 185 2.1E-36 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS16740 6cdcbe7987a4cbecb68a7b38c45d6b63 187 ProSitePatterns PS00893 Nudix box signature. 83 104 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS16740 6cdcbe7987a4cbecb68a7b38c45d6b63 187 Pfam PF00293 NUDIX domain 49 167 3.6E-17 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS16740 6cdcbe7987a4cbecb68a7b38c45d6b63 187 SUPERFAMILY SSF55811 11 185 4.06E-36 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS16740 6cdcbe7987a4cbecb68a7b38c45d6b63 187 PANTHER PTHR11839:SF12 8 184 7.3E-82 T 25-04-2016 SMD_RS06060 32b974be689097c84dbf9882bcce2fc3 148 Gene3D G3DSA:3.40.630.30 1 139 4.8E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06060 32b974be689097c84dbf9882bcce2fc3 148 Pfam PF13673 Acetyltransferase (GNAT) domain 29 139 2.3E-14 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS06060 32b974be689097c84dbf9882bcce2fc3 148 SUPERFAMILY SSF55729 1 137 2.7E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06060 32b974be689097c84dbf9882bcce2fc3 148 PANTHER PTHR23091 1 135 2.0E-12 T 25-04-2016 SMD_RS14710 81bd7ffef19c24950c0bccfd28a75ad5 295 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 51 282 1.9E-26 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS14710 81bd7ffef19c24950c0bccfd28a75ad5 295 SUPERFAMILY SSF56219 46 289 2.09E-39 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS14710 81bd7ffef19c24950c0bccfd28a75ad5 295 Gene3D G3DSA:3.60.10.10 47 289 2.5E-23 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS14710 81bd7ffef19c24950c0bccfd28a75ad5 295 PANTHER PTHR14859 47 292 5.2E-45 T 25-04-2016 IPR027317 PGAP2-interacting protein SMD_RS09975 7443ee22abd34ee354680f34d64f902f 144 SMART SM01034 2 94 6.3E-18 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS09975 7443ee22abd34ee354680f34d64f902f 144 SUPERFAMILY SSF54975 1 115 1.18E-23 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS09975 7443ee22abd34ee354680f34d64f902f 144 Pfam PF04940 Sensors of blue-light using FAD 2 92 2.5E-21 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 Gene3D G3DSA:3.40.50.300 25 193 9.7E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 PIRSF PIRSF002849 2 327 4.9E-123 T 25-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 PANTHER PTHR11603 1 324 1.0E-136 T 25-04-2016 SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 43 177 7.2E-63 T 25-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 SUPERFAMILY SSF52540 8 299 1.42E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 PANTHER PTHR11603:SF156 1 324 1.0E-136 T 25-04-2016 SMD_RS00555 63cb0fba475bbaf04d3a344b65312858 327 Gene3D G3DSA:1.10.8.300 207 323 4.5E-35 T 25-04-2016 SMD_RS12360 92e6a47a2b13c36c456274ad32c2a731 177 Pfam PF10986 Protein of unknown function (DUF2796) 25 170 5.9E-23 T 25-04-2016 IPR021253 Protein of unknown function DUF2796 SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 Gene3D G3DSA:3.90.550.10 4 230 2.3E-65 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 SUPERFAMILY SSF53448 5 228 5.85E-54 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 PANTHER PTHR32125 5 230 1.5E-71 T 25-04-2016 SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 230 29.241 T 25-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 228 1.4E-63 T 25-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 PANTHER PTHR32125:SF4 5 230 1.5E-71 T 25-04-2016 SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 25-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS08775 a3a64599eaba78d71b317ca27c0efd6f 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 227 3.0E-71 T 25-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMD_RS11430 c5c7c7c82a1015c797eef62a2bddef61 430 Gene3D G3DSA:3.40.50.300 1 196 1.5E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11430 c5c7c7c82a1015c797eef62a2bddef61 430 Pfam PF05707 Zonular occludens toxin (Zot) 1 200 6.0E-31 T 25-04-2016 IPR008900 Zona occludens toxin SMD_RS13555 6fc64fc2b6e82afecc19be9589499aa7 138 Pfam PF13673 Acetyltransferase (GNAT) domain 41 129 6.9E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS13555 6fc64fc2b6e82afecc19be9589499aa7 138 SUPERFAMILY SSF55729 16 129 1.08E-17 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS13555 6fc64fc2b6e82afecc19be9589499aa7 138 PANTHER PTHR13355:SF5 55 138 1.5E-13 T 25-04-2016 SMD_RS13555 6fc64fc2b6e82afecc19be9589499aa7 138 PANTHER PTHR13355 55 138 1.5E-13 T 25-04-2016 SMD_RS13555 6fc64fc2b6e82afecc19be9589499aa7 138 Gene3D G3DSA:3.40.630.30 15 134 8.3E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06515 1f07b88ef813bb51d9b39530bdc0e7c9 122 Pfam PF05433 Glycine zipper 2TM domain 60 101 3.2E-10 T 25-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SMD_RS06515 1f07b88ef813bb51d9b39530bdc0e7c9 122 PANTHER PTHR35603:SF2 2 121 2.7E-38 T 25-04-2016 SMD_RS06515 1f07b88ef813bb51d9b39530bdc0e7c9 122 PANTHER PTHR35603 2 121 2.7E-38 T 25-04-2016 SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 PANTHER PTHR11746:SF102 121 185 7.7E-26 T 25-04-2016 SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 Hamap MF_00528 Septum formation protein Maf [maf]. 2 188 28.492 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 Pfam PF02545 Maf-like protein 3 183 7.1E-43 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 2.7E-46 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 SUPERFAMILY SSF52972 2 182 3.34E-55 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 Gene3D G3DSA:3.90.950.10 2 186 2.1E-54 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 PIRSF PIRSF006305 1 188 6.2E-40 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 SMD_RS05135 865e88f2c705b6dbc52dd7b2b3330f30 189 PANTHER PTHR11746 121 185 7.7E-26 T 25-04-2016 SMD_RS05970 eeb592f803450b7019a66165940e9721 181 Pfam PF08534 Redoxin 54 174 2.8E-12 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMD_RS05970 eeb592f803450b7019a66165940e9721 181 PANTHER PTHR13833:SF38 55 180 1.7E-27 T 25-04-2016 SMD_RS05970 eeb592f803450b7019a66165940e9721 181 Gene3D G3DSA:3.40.30.10 9 180 1.6E-43 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS05970 eeb592f803450b7019a66165940e9721 181 PANTHER PTHR13833 55 180 1.7E-27 T 25-04-2016 SMD_RS05970 eeb592f803450b7019a66165940e9721 181 SUPERFAMILY SSF52833 49 178 4.03E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS17755 090c842bcaa3d4471c4f92052d6f06bf 334 Pfam PF00092 von Willebrand factor type A domain 101 290 4.3E-27 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17755 090c842bcaa3d4471c4f92052d6f06bf 334 Gene3D G3DSA:3.40.50.410 95 292 3.7E-29 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17755 090c842bcaa3d4471c4f92052d6f06bf 334 SUPERFAMILY SSF53300 95 293 2.23E-39 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17755 090c842bcaa3d4471c4f92052d6f06bf 334 PANTHER PTHR22550:SF12 13 334 2.5E-130 T 25-04-2016 SMD_RS17755 090c842bcaa3d4471c4f92052d6f06bf 334 PANTHER PTHR22550 13 334 2.5E-130 T 25-04-2016 SMD_RS17755 090c842bcaa3d4471c4f92052d6f06bf 334 SMART SM00327 98 297 6.5E-28 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.174 T 25-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 PIRSF PIRSF001259 1 366 1.4E-117 T 25-04-2016 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 PANTHER PTHR21327 1 366 1.9E-141 T 25-04-2016 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 Pfam PF00925 GTP cyclohydrolase II 207 364 4.8E-29 T 25-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 Gene3D G3DSA:3.90.870.10 1 211 6.9E-99 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 2.4E-83 T 25-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 9.0E-72 T 25-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 PANTHER PTHR21327:SF6 1 366 1.9E-141 T 25-04-2016 SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 SUPERFAMILY SSF55821 2 202 6.41E-84 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMD_RS03330 c77b94728b4b1a0dd088c0b25046c3a2 366 SUPERFAMILY SSF142695 204 365 2.09E-40 T 25-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 1.5E-35 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 8.0E-34 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 4.7E-11 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 4.7E-11 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 4.7E-11 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 Gene3D G3DSA:3.40.50.1370 159 321 1.1E-48 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PANTHER PTHR11405:SF1 1 333 8.0E-95 T 25-04-2016 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 Gene3D G3DSA:3.40.50.1370 3 158 6.0E-50 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 SUPERFAMILY SSF53671 2 335 6.29E-73 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PANTHER PTHR11405 1 333 8.0E-95 T 25-04-2016 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 1.1E-12 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 1.1E-12 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS14960 7a6f9282805ad7d1f96ed14025d51ac8 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 1.1E-12 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 PANTHER PTHR10168 11 90 1.4E-27 T 25-04-2016 SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 SUPERFAMILY SSF52833 8 93 9.41E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 PRINTS PR00160 Glutaredoxin signature 54 67 2.1E-12 T 25-04-2016 IPR014025 Glutaredoxin subgroup SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 PRINTS PR00160 Glutaredoxin signature 12 30 2.1E-12 T 25-04-2016 IPR014025 Glutaredoxin subgroup SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 PRINTS PR00160 Glutaredoxin signature 68 81 2.1E-12 T 25-04-2016 IPR014025 Glutaredoxin subgroup SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 Pfam PF00462 Glutaredoxin 12 71 6.0E-18 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 ProSitePatterns PS00195 Glutaredoxin active site. 14 30 - T 25-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 12 90 3.0E-34 T 25-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 SMD_RS04515 d4343ad4046b1d83f1a924c585df2a7f 96 Gene3D G3DSA:3.40.30.10 11 92 6.6E-27 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS21655 9b84100cf51dc073efc12d99c9f48a2c 75 PANTHER PTHR33162 1 72 1.1E-17 T 25-04-2016 SMD_RS21655 9b84100cf51dc073efc12d99c9f48a2c 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.6E-22 T 25-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SMD_RS21655 9b84100cf51dc073efc12d99c9f48a2c 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 21.629 T 25-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SMD_RS21655 9b84100cf51dc073efc12d99c9f48a2c 75 Pfam PF02416 mttA/Hcf106 family 5 51 5.0E-15 T 25-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 Pfam PF00294 pfkB family carbohydrate kinase 10 297 1.2E-47 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 Gene3D G3DSA:2.20.150.10 12 38 3.5E-16 T 25-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 PANTHER PTHR10584:SF170 1 304 4.3E-99 T 25-04-2016 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 PIRSF PIRSF000535 2 317 3.2E-94 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 PANTHER PTHR10584 1 304 4.3E-99 T 25-04-2016 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 6 314 1.5E-88 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 Gene3D G3DSA:3.40.1190.20 39 316 2.5E-72 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS11700 d4ef568974b32a2093d77a510079b6e0 318 SUPERFAMILY SSF53613 6 294 2.49E-57 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS08030 d8a02907bef132b0f3d9ca1f69ca56bc 245 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 45 242 7.0E-86 T 25-04-2016 IPR022293 Integrating conjugative element protein, PFL4693 SMD_RS21780 3f1df291b836d663d8b8a106957f17dc 1126 Gene3D G3DSA:3.40.1140.10 22 244 7.1E-26 T 25-04-2016 SMD_RS21780 3f1df291b836d663d8b8a106957f17dc 1126 SUPERFAMILY SSF52540 922 1071 6.24E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21780 3f1df291b836d663d8b8a106957f17dc 1126 SUPERFAMILY SSF52540 29 74 6.24E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21780 3f1df291b836d663d8b8a106957f17dc 1126 Pfam PF13558 Putative exonuclease SbcCD, C subunit 971 1058 2.4E-20 T 25-04-2016 SMD_RS21780 3f1df291b836d663d8b8a106957f17dc 1126 Pfam PF13555 P-loop containing region of AAA domain 25 84 5.0E-22 T 25-04-2016 SMD_RS21780 3f1df291b836d663d8b8a106957f17dc 1126 Gene3D G3DSA:3.40.50.300 945 1058 1.3E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06545 3a6928760fb7ab175db340b7f70a78a1 204 PANTHER PTHR30086 1 202 1.2E-77 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS06545 3a6928760fb7ab175db340b7f70a78a1 204 PANTHER PTHR30086:SF0 1 202 1.2E-77 T 25-04-2016 SMD_RS06545 3a6928760fb7ab175db340b7f70a78a1 204 Pfam PF01810 LysE type translocator 16 201 7.0E-37 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS19665 d5424e8f07a3c4bda3809cbe22a47272 254 Pfam PF00114 Pilin (bacterial filament) 148 253 1.2E-13 T 25-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 SMD_RS19665 d5424e8f07a3c4bda3809cbe22a47272 254 Gene3D G3DSA:3.30.700.10 125 254 1.4E-24 T 25-04-2016 SMD_RS19665 d5424e8f07a3c4bda3809cbe22a47272 254 SUPERFAMILY SSF54523 141 253 3.98E-20 T 25-04-2016 SMD_RS19665 d5424e8f07a3c4bda3809cbe22a47272 254 Pfam PF14237 Domain of unknown function (DUF4339) 4 47 2.5E-15 T 25-04-2016 IPR025640 Domain of unknown function DUF4339 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-94 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82714 183 272 2.22E-21 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82693 38 130 3.66E-21 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82866 829 1020 2.09E-44 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PANTHER PTHR32063:SF13 1 1022 0.0 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Gene3D G3DSA:3.30.70.1430 38 139 8.6E-26 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Gene3D G3DSA:3.30.2090.10 181 275 1.8E-25 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Gene3D G3DSA:3.30.2090.10 719 806 8.7E-19 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82693 668 717 3.03E-21 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82693 804 852 3.03E-21 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82714 720 802 6.02E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82693 274 329 1.2E-22 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82693 135 182 1.2E-22 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82693 565 665 4.24E-22 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 SUPERFAMILY SSF82866 296 498 6.41E-48 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 PANTHER PTHR32063 1 1022 0.0 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Gene3D G3DSA:3.30.70.1430 567 666 5.6E-25 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Gene3D G3DSA:1.10.3850.10 810 1022 5.1E-57 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 Gene3D G3DSA:1.10.3850.10 279 499 2.2E-59 T 25-04-2016 SMD_RS10445 bc526bf58a9536cbc667c94a1136417c 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1023 0.0 T 25-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SMD_RS10735 4e0c04e68e00aeead2ba3800e115d34b 246 PANTHER PTHR30433 2 245 1.6E-103 T 25-04-2016 SMD_RS10735 4e0c04e68e00aeead2ba3800e115d34b 246 PANTHER PTHR30433:SF3 2 245 1.6E-103 T 25-04-2016 IPR022522 Flagellar motor stator, MotA SMD_RS10735 4e0c04e68e00aeead2ba3800e115d34b 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 7.8E-26 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 5.9E-20 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.5E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.5E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 SUPERFAMILY SSF46785 2 73 6.1E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 Gene3D G3DSA:1.20.120.530 96 236 6.6E-31 T 25-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 SMART SM00345 10 69 2.5E-20 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 Gene3D G3DSA:1.10.10.10 2 72 2.9E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 PANTHER PTHR11751 94 116 6.7E-33 T 25-04-2016 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 PANTHER PTHR11751 1 72 6.7E-33 T 25-04-2016 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 Pfam PF07729 FCD domain 100 227 6.0E-26 T 25-04-2016 IPR011711 GntR, C-terminal SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 PANTHER PTHR11751:SF382 94 116 6.7E-33 T 25-04-2016 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 PANTHER PTHR11751:SF382 1 72 6.7E-33 T 25-04-2016 SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 SMART SM00895 100 228 2.4E-22 T 25-04-2016 IPR011711 GntR, C-terminal SMD_RS13330 1ef7735e19f7037f127e2ba00066311a 254 SUPERFAMILY SSF48008 97 234 6.28E-30 T 25-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SMD_RS04075 6596eedd5ede3b6b188a48252bf989dc 338 Pfam PF01112 Asparaginase 25 327 5.1E-116 T 25-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SMD_RS04075 6596eedd5ede3b6b188a48252bf989dc 338 SUPERFAMILY SSF56235 25 327 6.69E-94 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS04075 6596eedd5ede3b6b188a48252bf989dc 338 PANTHER PTHR10188 25 328 2.3E-126 T 25-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SMD_RS04075 6596eedd5ede3b6b188a48252bf989dc 338 PANTHER PTHR10188:SF24 25 328 2.3E-126 T 25-04-2016 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SUPERFAMILY SSF55785 287 411 6.44E-20 T 25-04-2016 IPR000014 PAS domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Gene3D G3DSA:3.30.450.20 169 287 6.7E-16 T 25-04-2016 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 562 1.8E-24 T 25-04-2016 IPR000160 GGDEF domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SMART SM00091 302 368 5.2E-10 T 25-04-2016 IPR000014 PAS domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 298 420 8.0E-18 T 25-04-2016 IPR000014 PAS domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Pfam PF13426 PAS domain 237 289 0.63 T 25-04-2016 IPR000014 PAS domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 PANTHER PTHR24423:SF439 1 423 8.3E-39 T 25-04-2016 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 561 3.6E-23 T 25-04-2016 IPR000160 GGDEF domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SMART SM00267 413 568 3.8E-17 T 25-04-2016 IPR000160 GGDEF domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Gene3D G3DSA:3.30.450.20 288 411 8.4E-22 T 25-04-2016 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SUPERFAMILY SSF55781 21 156 9.16E-23 T 25-04-2016 IPR029016 GAF domain-like SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SUPERFAMILY SSF55785 164 288 1.62E-12 T 25-04-2016 IPR000014 PAS domain SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Gene3D G3DSA:3.30.450.40 6 158 2.0E-13 T 25-04-2016 IPR029016 GAF domain-like SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SMART SM00065 19 163 5.3E-5 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 SUPERFAMILY SSF55073 429 560 7.85E-26 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Gene3D G3DSA:3.30.70.270 426 562 1.1E-26 T 25-04-2016 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Pfam PF08448 PAS fold 315 414 5.3E-8 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 PANTHER PTHR24423 1 423 8.3E-39 T 25-04-2016 SMD_RS12105 52cde212cd49703da65135a3a0f41ba4 572 Pfam PF13185 GAF domain 20 153 8.0E-7 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 Pfam PF00270 DEAD/DEAH box helicase 199 361 1.7E-14 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 TIGRFAM TIGR00595 priA: primosomal protein N' 218 721 1.5E-172 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 724 23.731 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 PANTHER PTHR30580 1 725 7.8E-253 T 25-04-2016 SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 SUPERFAMILY SSF52540 384 610 4.37E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 Pfam PF00271 Helicase conserved C-terminal domain 494 584 2.2E-7 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 SMART SM00490 489 585 1.6E-10 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 Gene3D G3DSA:3.40.50.300 196 378 2.0E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 SUPERFAMILY SSF52540 193 371 2.13E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 Gene3D G3DSA:3.40.50.300 404 425 3.7E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 Gene3D G3DSA:3.40.50.300 486 629 3.7E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19725 eca68808536fdf6326e9a114482c2e4f 725 SMART SM00487 193 389 8.3E-23 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 SUPERFAMILY SSF46689 3 74 1.06E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 PANTHER PTHR30514 4 258 8.0E-41 T 25-04-2016 SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 75 3.5E-21 T 25-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 PANTHER PTHR30514:SF1 4 258 8.0E-41 T 25-04-2016 SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 SUPERFAMILY SSF53697 106 264 4.25E-23 T 25-04-2016 SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 Pfam PF01380 SIS domain 130 256 4.5E-15 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 Gene3D G3DSA:1.10.10.10 4 76 2.9E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02165 e7be18fc8005b93a3dece2a55ce25a62 282 Gene3D G3DSA:3.40.50.10490 104 272 6.8E-24 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82693 665 715 3.66E-27 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.6E-100 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Gene3D G3DSA:3.30.2090.10 181 275 6.1E-27 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Gene3D G3DSA:3.30.2090.10 716 812 7.1E-19 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Gene3D G3DSA:1.10.3850.10 280 499 9.0E-61 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Gene3D G3DSA:1.10.3850.10 815 1029 7.8E-55 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PANTHER PTHR32063:SF13 1 1057 0.0 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82693 809 858 3.66E-27 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Gene3D G3DSA:3.30.70.1430 38 139 2.9E-35 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 PANTHER PTHR32063 1 1057 0.0 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Gene3D G3DSA:3.30.70.1430 565 664 1.9E-29 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82866 832 1028 8.24E-46 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82866 296 497 1.22E-48 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82693 135 182 6.98E-23 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82693 274 330 6.98E-23 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82714 182 271 3.14E-22 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 25-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82693 38 132 1.6E-28 T 25-04-2016 SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82714 716 807 2.75E-13 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS14345 39260656f90c55227ff4af72a39ab5f8 1057 SUPERFAMILY SSF82693 563 664 3.35E-27 T 25-04-2016 SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 PANTHER PTHR30353:SF5 1 306 1.3E-116 T 25-04-2016 SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 PANTHER PTHR30353:SF5 353 455 1.3E-116 T 25-04-2016 SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 Pfam PF14067 LssY C-terminus 499 619 4.4E-12 T 25-04-2016 IPR025902 LssY-like C-terminal domain SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 Pfam PF01569 PAP2 superfamily 358 436 2.7E-10 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 PANTHER PTHR30353 1 306 1.3E-116 T 25-04-2016 IPR032818 DedA family SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 PANTHER PTHR30353 353 455 1.3E-116 T 25-04-2016 IPR032818 DedA family SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 Gene3D G3DSA:1.20.144.10 266 432 1.4E-15 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 Pfam PF09335 SNARE associated Golgi protein 40 163 4.0E-18 T 25-04-2016 IPR032816 SNARE associated Golgi protein SMD_RS18090 628d0b89249422189ac93c9760b091d5 665 SUPERFAMILY SSF48317 245 441 1.44E-24 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 60 256 1.8E-76 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 233 245 - T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PANTHER PTHR30587:SF0 37 258 2.7E-120 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 185 200 - T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PANTHER PTHR30587 37 258 2.7E-120 T 25-04-2016 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 230 255 6.6E-61 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 58 77 6.6E-61 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 97 116 6.6E-61 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 206 227 6.6E-61 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 77 97 6.6E-61 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 185 205 6.6E-61 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 156 168 5.9E-16 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 56 65 5.9E-16 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 5.9E-16 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 246 256 5.9E-16 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 128 5.9E-16 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 128 142 5.9E-16 T 25-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMD_RS10795 81e169eaec94b3099d6ba1eb0cd39294 259 Pfam PF00813 FliP family 60 252 8.6E-73 T 25-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 SUPERFAMILY SSF48498 78 185 1.09E-21 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 Gene3D G3DSA:1.10.10.60 3 54 2.8E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 PANTHER PTHR30055 1 190 4.5E-13 T 25-04-2016 SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 Gene3D G3DSA:1.10.357.10 55 187 1.2E-10 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 186 1.3E-7 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 SUPERFAMILY SSF46689 9 75 1.85E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS14095 9938431a4864fd04fed955bb6833bc9b 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 4.5E-9 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18165 7f480569f61b0b34c72b1f35dd145cf5 311 PANTHER PTHR30273 9 311 7.6E-39 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS18165 7f480569f61b0b34c72b1f35dd145cf5 311 Pfam PF16220 Domain of unknown function (DUF4880) 17 56 7.7E-8 T 25-04-2016 IPR032623 FecR, N-terminal SMD_RS18165 7f480569f61b0b34c72b1f35dd145cf5 311 Pfam PF04773 FecR protein 110 196 9.4E-18 T 25-04-2016 IPR006860 FecR protein SMD_RS18165 7f480569f61b0b34c72b1f35dd145cf5 311 PIRSF PIRSF018266 6 311 4.0E-58 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS18165 7f480569f61b0b34c72b1f35dd145cf5 311 PANTHER PTHR30273:SF2 9 311 7.6E-39 T 25-04-2016 SMD_RS02400 50824f857b1bc0c9ce7d3f1e495ed846 280 SUPERFAMILY SSF53335 67 268 2.0E-22 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02400 50824f857b1bc0c9ce7d3f1e495ed846 280 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 180 243 2.0E-5 T 25-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 SMD_RS02400 50824f857b1bc0c9ce7d3f1e495ed846 280 Gene3D G3DSA:3.40.50.150 126 196 1.7E-6 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02400 50824f857b1bc0c9ce7d3f1e495ed846 280 Gene3D G3DSA:3.40.50.150 197 269 1.3E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 63 4.3E-19 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 PIRSF PIRSF002211 1 63 4.5E-24 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 SUPERFAMILY SSF55129 7 63 3.79E-17 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 18.84 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 Gene3D G3DSA:3.30.1390.20 7 63 1.0E-23 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 Pfam PF00327 Ribosomal protein L30p/L7e 10 59 2.6E-13 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SMD_RS04260 38ce3a8bc9165f12da64d0877704b5ea 63 PANTHER PTHR15892 7 63 3.7E-18 T 25-04-2016 SMD_RS07045 d6f0879850bd10ed38948d8e15335d53 249 PANTHER PTHR30251:SF4 32 247 4.3E-48 T 25-04-2016 SMD_RS07045 d6f0879850bd10ed38948d8e15335d53 249 Gene3D G3DSA:2.60.40.360 35 152 2.0E-18 T 25-04-2016 IPR008962 PapD-like SMD_RS07045 d6f0879850bd10ed38948d8e15335d53 249 SUPERFAMILY SSF49354 32 152 4.71E-23 T 25-04-2016 IPR008962 PapD-like SMD_RS07045 d6f0879850bd10ed38948d8e15335d53 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 35 153 1.7E-21 T 25-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 SMD_RS07045 d6f0879850bd10ed38948d8e15335d53 249 PANTHER PTHR30251 32 247 4.3E-48 T 25-04-2016 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 6.0E-20 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 SUPERFAMILY SSF46894 141 210 6.46E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 PANTHER PTHR26402 8 213 8.4E-71 T 25-04-2016 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 PANTHER PTHR26402:SF151 8 213 8.4E-71 T 25-04-2016 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 Pfam PF00072 Response regulator receiver domain 10 121 5.7E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 SMART SM00448 8 121 9.4E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 SUPERFAMILY SSF52172 7 129 1.37E-34 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 SMART SM00421 146 203 4.7E-21 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 Gene3D G3DSA:3.40.50.2300 7 152 8.2E-41 T 25-04-2016 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.5E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.5E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.5E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS13245 a49ae2048ab6ecd6f3eaeef822fe8d62 217 Gene3D G3DSA:1.10.10.10 153 208 1.8E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Gene3D G3DSA:3.30.830.10 278 453 1.4E-18 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Gene3D G3DSA:3.30.830.10 734 922 3.7E-21 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 SUPERFAMILY SSF63411 734 926 5.0E-28 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 PANTHER PTHR11851:SF136 15 884 4.3E-220 T 25-04-2016 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 SUPERFAMILY SSF63411 503 714 1.31E-43 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Gene3D G3DSA:3.30.830.10 37 257 1.8E-51 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Gene3D G3DSA:3.30.830.10 508 724 1.6E-39 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 PANTHER PTHR11851 15 884 4.3E-220 T 25-04-2016 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Pfam PF05193 Peptidase M16 inactive domain 211 385 4.6E-33 T 25-04-2016 IPR007863 Peptidase M16, C-terminal SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Pfam PF05193 Peptidase M16 inactive domain 675 854 6.3E-27 T 25-04-2016 IPR007863 Peptidase M16, C-terminal SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 SUPERFAMILY SSF63411 41 256 7.16E-54 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Pfam PF00675 Insulinase (Peptidase family M16) 53 181 4.6E-15 T 25-04-2016 IPR011765 Peptidase M16, N-terminal SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 Pfam PF00675 Insulinase (Peptidase family M16) 520 637 1.2E-6 T 25-04-2016 IPR011765 Peptidase M16, N-terminal SMD_RS01060 346b174dd22d294a9e572da4d14adeef 949 SUPERFAMILY SSF63411 274 454 1.23E-28 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 Gene3D G3DSA:3.30.1060.10 10 202 4.4E-76 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 Pfam PF01625 Peptide methionine sulfoxide reductase 49 202 2.0E-64 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 46 208 38.361 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 PANTHER PTHR10173:SF36 8 206 1.5E-102 T 25-04-2016 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 48 202 1.1E-65 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 PANTHER PTHR10173 8 206 1.5E-102 T 25-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SMD_RS03830 cbf68806c63cf69fcb814662b52b9df1 221 SUPERFAMILY SSF55068 16 212 6.67E-79 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS02675 115c87acb6353c8d4ce5332a284a8110 188 Pfam PF11454 Protein of unknown function (DUF3016) 40 177 1.3E-48 T 25-04-2016 IPR021557 Protein of unknown function DUF3016 SMD_RS09835 0f138c56d12268fc03b81bac0e17ac84 540 SUPERFAMILY SSF116734 4 188 7.36E-35 T 25-04-2016 SMD_RS09835 0f138c56d12268fc03b81bac0e17ac84 540 PANTHER PTHR30408 5 355 1.9E-25 T 25-04-2016 SMD_RS09835 0f138c56d12268fc03b81bac0e17ac84 540 Pfam PF01420 Type I restriction modification DNA specificity domain 6 170 3.6E-16 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMD_RS09835 0f138c56d12268fc03b81bac0e17ac84 540 Pfam PF01420 Type I restriction modification DNA specificity domain 191 354 2.0E-10 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMD_RS09835 0f138c56d12268fc03b81bac0e17ac84 540 SUPERFAMILY SSF116734 174 386 1.21E-29 T 25-04-2016 SMD_RS09835 0f138c56d12268fc03b81bac0e17ac84 540 PANTHER PTHR30408:SF2 5 355 1.9E-25 T 25-04-2016 SMD_RS06925 337a319d7c9971aa15ec394b1d5f1a59 196 Gene3D G3DSA:3.40.50.150 3 177 1.5E-14 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS06925 337a319d7c9971aa15ec394b1d5f1a59 196 Pfam PF13489 Methyltransferase domain 38 162 1.5E-9 T 25-04-2016 SMD_RS06925 337a319d7c9971aa15ec394b1d5f1a59 196 SUPERFAMILY SSF53335 11 183 8.44E-19 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11130 fa4b4528507a82252a88e47ddfe79ab0 348 Gene3D G3DSA:3.40.50.1980 234 342 3.0E-17 T 25-04-2016 SMD_RS11130 fa4b4528507a82252a88e47ddfe79ab0 348 Pfam PF01497 Periplasmic binding protein 91 321 1.7E-17 T 25-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SMD_RS11130 fa4b4528507a82252a88e47ddfe79ab0 348 Gene3D G3DSA:3.40.50.1980 89 204 6.5E-6 T 25-04-2016 SMD_RS11130 fa4b4528507a82252a88e47ddfe79ab0 348 PANTHER PTHR30535 63 324 2.8E-29 T 25-04-2016 SMD_RS11130 fa4b4528507a82252a88e47ddfe79ab0 348 SUPERFAMILY SSF53807 90 342 2.2E-30 T 25-04-2016 SMD_RS11130 fa4b4528507a82252a88e47ddfe79ab0 348 PANTHER PTHR30535:SF4 63 324 2.8E-29 T 25-04-2016 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 PANTHER PTHR23083 86 387 3.3E-22 T 25-04-2016 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 Gene3D G3DSA:1.25.40.10 114 192 2.3E-5 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 SMART SM00028 179 212 15.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 SMART SM00028 320 353 13.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 SMART SM00028 354 386 56.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 Pfam PF14559 Tetratricopeptide repeat 226 280 1.6E-5 T 25-04-2016 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 PANTHER PTHR23083:SF195 86 387 3.3E-22 T 25-04-2016 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 Gene3D G3DSA:1.25.40.10 193 278 2.1E-18 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 Gene3D G3DSA:1.25.40.10 318 381 2.1E-18 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 SUPERFAMILY SSF48452 320 382 2.4E-14 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 SUPERFAMILY SSF48452 179 281 2.4E-14 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00145 655e719916ae28d05dccbd1dba4e52d7 397 SUPERFAMILY SSF48452 114 207 3.29E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 Pfam PF13629 Pilus formation protein N terminal region 32 103 9.1E-19 T 25-04-2016 IPR032789 Pilus formation protein, N-terminal SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 PANTHER PTHR30332 167 429 5.7E-69 T 25-04-2016 SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 PRINTS PR00811 Bacterial general secretion pathway protein D signature 375 393 7.4E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 PRINTS PR00811 Bacterial general secretion pathway protein D signature 398 412 7.4E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 PRINTS PR00811 Bacterial general secretion pathway protein D signature 246 270 7.4E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 Pfam PF00263 Bacterial type II and III secretion system protein 250 411 2.6E-45 T 25-04-2016 IPR004846 Type II/III secretion system GO:0009306 SMD_RS13150 b48e0dba8984c48cc1a534ca5a6ea236 448 PANTHER PTHR30332:SF1 167 429 5.7E-69 T 25-04-2016 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 40 55 4.9E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 55 71 4.9E-5 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 PANTHER PTHR11019:SF98 4 73 5.0E-12 T 25-04-2016 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 SMART SM00342 1 71 4.8E-5 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 PANTHER PTHR11019 4 73 5.0E-12 T 25-04-2016 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 SUPERFAMILY SSF46689 27 75 1.93E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 Pfam PF12833 Helix-turn-helix domain 1 72 6.6E-16 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS19380 12c38b081bc2b7a86145a7a3eb4b6445 77 Gene3D G3DSA:1.10.10.60 28 75 4.1E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS15705 62dbb1dc1497d39b23f090b75d37448c 140 PIRSF PIRSF000714 3 139 4.6E-46 T 25-04-2016 IPR026026 Histidine triad hydrolase, Hint-type SMD_RS15705 62dbb1dc1497d39b23f090b75d37448c 140 Pfam PF01230 HIT domain 12 100 1.6E-11 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS15705 62dbb1dc1497d39b23f090b75d37448c 140 PANTHER PTHR23089:SF13 16 119 5.5E-14 T 25-04-2016 SMD_RS15705 62dbb1dc1497d39b23f090b75d37448c 140 Gene3D G3DSA:3.30.428.10 3 134 2.6E-30 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMD_RS15705 62dbb1dc1497d39b23f090b75d37448c 140 PANTHER PTHR23089 16 119 5.5E-14 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS15705 62dbb1dc1497d39b23f090b75d37448c 140 SUPERFAMILY SSF54197 4 134 5.1E-33 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 PIRSF PIRSF000157 1 935 0.0 T 25-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 Gene3D G3DSA:3.40.50.970 598 797 2.6E-23 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 Pfam PF02779 Transketolase, pyrimidine binding domain 596 789 6.2E-63 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 PANTHER PTHR23152:SF4 6 941 0.0 T 25-04-2016 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 Pfam PF00676 Dehydrogenase E1 component 209 514 2.9E-51 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 Gene3D G3DSA:3.40.50.970 157 530 7.2E-72 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 933 0.0 T 25-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 1.4E-15 T 25-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 SUPERFAMILY SSF52518 578 795 6.9E-50 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 SMART SM00861 595 788 3.0E-54 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 SUPERFAMILY SSF52518 118 516 1.91E-86 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 793 933 5.7E-51 T 25-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SMD_RS14465 4974e4e3bcdefe2cda7a089e0fb36e5a 943 PANTHER PTHR23152 6 941 0.0 T 25-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 PANTHER PTHR30069:SF7 13 274 5.8E-132 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 PANTHER PTHR30069:SF7 697 815 5.8E-132 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 PANTHER PTHR30069:SF7 297 677 5.8E-132 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Gene3D G3DSA:2.170.130.10 25 164 1.2E-32 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 161 7.4E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 SUPERFAMILY SSF56935 370 432 9.46E-94 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 SUPERFAMILY SSF56935 34 226 9.46E-94 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 SUPERFAMILY SSF56935 294 342 9.46E-94 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 SUPERFAMILY SSF56935 494 643 9.46E-94 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 SUPERFAMILY SSF56935 687 958 9.46E-94 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Pfam PF00593 TonB dependent receptor 601 954 1.1E-28 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 PANTHER PTHR30069 13 274 5.8E-132 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 PANTHER PTHR30069 697 815 5.8E-132 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 PANTHER PTHR30069 297 677 5.8E-132 T 25-04-2016 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Gene3D G3DSA:2.40.170.20 677 958 1.6E-86 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Gene3D G3DSA:2.40.170.20 496 631 1.6E-86 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Gene3D G3DSA:2.40.170.20 293 333 1.6E-86 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Gene3D G3DSA:2.40.170.20 165 233 1.6E-86 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS16650 cfe8ef65cf953843b9950ba5a81d06eb 958 Gene3D G3DSA:2.40.170.20 370 433 1.6E-86 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS03060 5dd451e94df72e8b838f3d9222a36aec 125 Pfam PF13511 Domain of unknown function (DUF4124) 10 63 3.8E-16 T 25-04-2016 IPR025392 Domain of unknown function DUF4124 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PANTHER PTHR11451:SF3 398 566 1.5E-143 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PANTHER PTHR11451:SF3 4 244 1.5E-143 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 SUPERFAMILY SSF55826 220 390 6.67E-36 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Pfam PF04073 Aminoacyl-tRNA editing domain 256 379 6.0E-31 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Gene3D G3DSA:3.30.930.10 11 234 1.2E-99 T 25-04-2016 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Gene3D G3DSA:3.30.930.10 389 471 1.2E-99 T 25-04-2016 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 SUPERFAMILY SSF55681 10 237 2.58E-98 T 25-04-2016 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 SUPERFAMILY SSF55681 406 477 2.58E-98 T 25-04-2016 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PANTHER PTHR11451 398 566 1.5E-143 T 25-04-2016 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 PANTHER PTHR11451 4 244 1.5E-143 T 25-04-2016 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Gene3D G3DSA:3.40.50.800 472 566 1.5E-22 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 39.337 T 25-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 SUPERFAMILY SSF52954 463 566 2.57E-25 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Pfam PF03129 Anticodon binding domain 474 566 5.6E-15 T 25-04-2016 IPR004154 Anticodon-binding SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 458 1.8E-42 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 5.5E-218 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMD_RS03055 75f89e99132a02a5fd3b8644521a026d 567 Gene3D G3DSA:3.90.960.10 252 388 1.8E-32 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PRINTS PR00604 Class IA and IB cytochrome C signature 56 71 2.4E-16 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PRINTS PR00604 Class IA and IB cytochrome C signature 43 50 2.4E-16 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PRINTS PR00604 Class IA and IB cytochrome C signature 72 82 2.4E-16 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PRINTS PR00604 Class IA and IB cytochrome C signature 121 129 2.4E-16 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PRINTS PR00604 Class IA and IB cytochrome C signature 86 102 2.4E-16 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PRINTS PR00604 Class IA and IB cytochrome C signature 105 115 2.4E-16 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 Pfam PF00034 Cytochrome c 39 130 3.9E-5 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PANTHER PTHR11961 9 128 5.1E-24 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 PANTHER PTHR11961:SF13 9 128 5.1E-24 T 25-04-2016 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 Gene3D G3DSA:1.10.760.10 36 131 2.8E-29 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS01030 da5f47fba8dddf92dd44841f601eb2b2 133 SUPERFAMILY SSF46626 39 131 1.6E-26 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 Pfam PF14760 Rnk N-terminus 9 48 4.4E-14 T 25-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 Gene3D G3DSA:3.10.50.30 51 130 2.0E-25 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 55 130 4.7E-21 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 PANTHER PTHR30437:SF5 8 130 4.3E-48 T 25-04-2016 SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 SUPERFAMILY SSF54534 54 129 7.32E-17 T 25-04-2016 SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 PANTHER PTHR30437 8 130 4.3E-48 T 25-04-2016 SMD_RS03840 c8576d517bd2ea1bed4fdfbd66340e2a 134 Gene3D G3DSA:1.10.286.20 9 48 2.6E-12 T 25-04-2016 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 25-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 Gene3D G3DSA:3.40.1500.10 5 298 8.6E-128 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 SUPERFAMILY SSF102886 4 298 1.7E-130 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 88 112 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 160 189 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 29 45 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 259 285 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 231 258 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 123 145 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PRINTS PR00073 Coprogen oxidase signature 46 67 2.9E-82 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PIRSF PIRSF000166 2 298 2.6E-121 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 PANTHER PTHR10755 1 298 3.4E-171 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 57.257 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS21380 d988771cef9d23913e2608a87d1cfd1a 298 Pfam PF01218 Coproporphyrinogen III oxidase 7 298 3.5E-128 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 9.3E-38 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 Pfam PF00210 Ferritin-like domain 9 144 1.6E-35 T 25-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 SUPERFAMILY SSF47240 1 156 4.07E-43 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PANTHER PTHR30295:SF9 1 155 6.1E-91 T 25-04-2016 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-35 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-35 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-35 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PRINTS PR00601 Bacterioferritin signature 85 105 1.1E-35 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PRINTS PR00601 Bacterioferritin signature 106 126 1.1E-35 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-35 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PANTHER PTHR30295 1 155 6.1E-91 T 25-04-2016 SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 Gene3D G3DSA:1.20.1260.10 1 155 8.5E-53 T 25-04-2016 IPR012347 Ferritin-related SMD_RS07105 8c0fcf2f263b0a7b75eaf9c03aad16ff 162 PIRSF PIRSF002560 1 157 1.0E-57 T 25-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 PANTHER PTHR30097:SF4 72 388 1.4E-63 T 25-04-2016 SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 PANTHER PTHR30097 72 388 1.4E-63 T 25-04-2016 SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 Gene3D G3DSA:2.40.50.100 187 217 3.0E-10 T 25-04-2016 SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 Gene3D G3DSA:2.40.50.100 81 116 3.0E-10 T 25-04-2016 SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 SUPERFAMILY SSF111369 74 303 4.71E-25 T 25-04-2016 SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 298 6.3E-32 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS12430 5a534b7fd3c21d2f5151b419e1a13177 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 367 4.9E-47 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 PANTHER PTHR11807 7 422 2.3E-75 T 25-04-2016 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 28 209 7.1E-48 T 25-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 PANTHER PTHR11807:SF2 7 422 2.3E-75 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 SUPERFAMILY SSF52402 27 237 4.57E-59 T 25-04-2016 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 Pfam PF09179 TilS substrate binding domain 254 321 4.6E-9 T 25-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 SUPERFAMILY SSF82829 242 325 1.2E-15 T 25-04-2016 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 SUPERFAMILY SSF56037 331 439 5.23E-21 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 Pfam PF11734 TilS substrate C-terminal domain 364 437 4.1E-17 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 SMART SM00977 364 437 1.1E-15 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 Gene3D G3DSA:3.40.50.620 28 185 3.2E-11 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 11 313 21.32 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 Pfam PF01171 PP-loop family 28 204 3.7E-52 T 25-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SMD_RS15815 0fc4c67510ad4efb7156f9eecfc7b6fc 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 409 3.3E-11 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMD_RS19960 a0db80a98907802cda0dae80d2a01e25 209 Gene3D G3DSA:3.40.1130.10 35 182 8.4E-10 T 25-04-2016 SMD_RS19960 a0db80a98907802cda0dae80d2a01e25 209 SUPERFAMILY SSF69593 17 199 2.48E-28 T 25-04-2016 SMD_RS19960 a0db80a98907802cda0dae80d2a01e25 209 Pfam PF01553 Acyltransferase 31 153 6.1E-13 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS19960 a0db80a98907802cda0dae80d2a01e25 209 SMART SM00563 34 156 9.0E-12 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS19960 a0db80a98907802cda0dae80d2a01e25 209 PANTHER PTHR10434 1 199 2.5E-40 T 25-04-2016 SMD_RS19960 a0db80a98907802cda0dae80d2a01e25 209 PANTHER PTHR10434:SF21 1 199 2.5E-40 T 25-04-2016 SMD_RS03585 1106d2f4ed3e6a2811811098d1c03461 168 PANTHER PTHR11049 9 158 2.7E-68 T 25-04-2016 SMD_RS03585 1106d2f4ed3e6a2811811098d1c03461 168 Gene3D G3DSA:3.10.129.10 6 157 1.6E-55 T 25-04-2016 IPR029069 HotDog domain SMD_RS03585 1106d2f4ed3e6a2811811098d1c03461 168 Pfam PF03061 Thioesterase superfamily 25 97 1.7E-16 T 25-04-2016 IPR006683 Thioesterase domain SMD_RS03585 1106d2f4ed3e6a2811811098d1c03461 168 SUPERFAMILY SSF54637 6 152 6.15E-46 T 25-04-2016 IPR029069 HotDog domain SMD_RS17070 7b29451fd65d0208a348c6e741c5f019 954 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 195 544 9.1E-76 T 25-04-2016 IPR010090 Phage tail tape measure protein SMD_RS17070 7b29451fd65d0208a348c6e741c5f019 954 Pfam PF10145 Phage-related minor tail protein 233 435 4.1E-38 T 25-04-2016 IPR010090 Phage tail tape measure protein SMD_RS17070 7b29451fd65d0208a348c6e741c5f019 954 PANTHER PTHR37813 5 954 4.7E-87 T 25-04-2016 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Gene3D G3DSA:3.40.50.300 258 345 5.4E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Gene3D G3DSA:3.40.50.300 11 117 5.4E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Gene3D G3DSA:1.10.8.60 349 457 3.3E-36 T 25-04-2016 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Pfam PF07724 AAA domain (Cdc48 subfamily) 196 343 2.1E-39 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 SMART SM01086 349 448 2.2E-25 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 11 457 7.5E-203 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 349 418 7.7E-7 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 SUPERFAMILY SSF52540 11 455 8.5E-89 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 PANTHER PTHR11262 231 457 9.5E-203 T 25-04-2016 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 PANTHER PTHR11262 5 112 9.5E-203 T 25-04-2016 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 PANTHER PTHR11262:SF3 231 457 9.5E-203 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 PANTHER PTHR11262:SF3 5 112 9.5E-203 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 8 457 43.474 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 60 111 1.1E-6 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Gene3D G3DSA:1.10.8.10 226 256 1.8E-28 T 25-04-2016 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 Gene3D G3DSA:1.10.8.10 118 190 1.8E-28 T 25-04-2016 SMD_RS18955 2bbdd80c786edd0130b673f84b16f2ad 457 SMART SM00382 56 346 2.2E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 Pfam PF00083 Sugar (and other) transporter 24 238 1.4E-29 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 Gene3D G3DSA:1.20.1250.20 250 338 1.1E-21 T 25-04-2016 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 Gene3D G3DSA:1.20.1250.20 20 227 3.6E-25 T 25-04-2016 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 Gene3D G3DSA:1.20.1250.20 453 548 1.1E-21 T 25-04-2016 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 PANTHER PTHR23508 14 340 8.1E-220 T 25-04-2016 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 PANTHER PTHR23508 455 552 8.1E-220 T 25-04-2016 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 SUPERFAMILY SSF103473 457 550 5.49E-59 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 SUPERFAMILY SSF103473 19 339 5.49E-59 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 PANTHER PTHR23508:SF7 14 340 8.1E-220 T 25-04-2016 SMD_RS21555 d641ac54381dca30f56f7d4a7d918a42 554 PANTHER PTHR23508:SF7 455 552 8.1E-220 T 25-04-2016 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 10 459 47.307 T 25-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 Gene3D G3DSA:3.40.640.10 74 354 1.5E-92 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 SUPERFAMILY SSF53383 17 457 6.05E-126 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 PANTHER PTHR11986:SF8 4 458 1.8E-202 T 25-04-2016 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 Pfam PF00202 Aminotransferase class-III 38 451 1.3E-115 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 Gene3D G3DSA:3.90.1150.10 13 73 5.5E-53 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 Gene3D G3DSA:3.90.1150.10 356 459 5.5E-53 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 PANTHER PTHR11986 4 458 1.8E-202 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 22 456 6.4E-165 T 25-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SMD_RS16745 7c2f491d822da5ee3a98c3660c9933f1 463 PIRSF PIRSF000521 31 429 2.2E-27 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 Gene3D G3DSA:2.40.170.20 173 795 2.9E-105 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 SUPERFAMILY SSF56935 36 794 1.62E-115 T 25-04-2016 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 Gene3D G3DSA:2.170.130.10 50 172 1.7E-31 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 6.4E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 PANTHER PTHR30069:SF4 5 794 7.0E-123 T 25-04-2016 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 Pfam PF00593 TonB dependent receptor 483 778 6.1E-33 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS17290 db1669100b33c82bc454cf2a554cac59 795 PANTHER PTHR30069 5 794 7.0E-123 T 25-04-2016 SMD_RS09895 553fa18a17f37c9866e686c257bc3d34 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 20 70 1.2E-16 T 25-04-2016 IPR007136 Protein of unknown function DUF347 SMD_RS09895 553fa18a17f37c9866e686c257bc3d34 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 139 183 1.5E-12 T 25-04-2016 IPR007136 Protein of unknown function DUF347 SMD_RS09895 553fa18a17f37c9866e686c257bc3d34 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 194 249 5.4E-13 T 25-04-2016 IPR007136 Protein of unknown function DUF347 SMD_RS09895 553fa18a17f37c9866e686c257bc3d34 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 74 124 9.1E-15 T 25-04-2016 IPR007136 Protein of unknown function DUF347 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 Gene3D G3DSA:2.40.128.130 497 803 4.8E-53 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 Pfam PF03212 Pertactin 357 458 1.4E-10 T 25-04-2016 IPR004899 Pertactin, central region SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 SMART SM00869 536 792 4.2E-25 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 Pfam PF03797 Autotransporter beta-domain 540 788 9.9E-33 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 Gene3D G3DSA:2.160.20.20 54 479 3.2E-62 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 SUPERFAMILY SSF103515 508 803 1.1E-35 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 356 803 9.7E-83 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PANTHER PTHR12338 501 803 6.3E-45 T 25-04-2016 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PANTHER PTHR12338 265 481 6.3E-45 T 25-04-2016 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 SUPERFAMILY SSF51126 52 213 7.85E-44 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 SUPERFAMILY SSF51126 246 459 7.85E-44 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PRINTS PR01482 Pertactin signature 75 89 2.1E-5 T 25-04-2016 IPR003992 Pertactin GO:0007155 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PRINTS PR01482 Pertactin signature 389 406 2.1E-5 T 25-04-2016 IPR003992 Pertactin GO:0007155 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PRINTS PR01482 Pertactin signature 322 346 2.1E-5 T 25-04-2016 IPR003992 Pertactin GO:0007155 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PANTHER PTHR12338:SF5 501 803 6.3E-45 T 25-04-2016 SMD_RS03365 d4c6a6fd861661f6d124ec3f03a62bac 803 PANTHER PTHR12338:SF5 265 481 6.3E-45 T 25-04-2016 SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 Pfam PF13406 Transglycosylase SLT domain 31 326 9.8E-106 T 25-04-2016 IPR031304 Transglycosylase SLT domain 2 SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 PANTHER PTHR30163:SF4 29 411 2.0E-218 T 25-04-2016 SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 Gene3D G3DSA:1.10.101.10 342 406 1.7E-9 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 Gene3D G3DSA:1.10.530.10 74 131 3.9E-57 T 25-04-2016 SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 Gene3D G3DSA:1.10.530.10 212 331 3.9E-57 T 25-04-2016 SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 SUPERFAMILY SSF53955 19 332 3.94E-95 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 30 329 3.2E-109 T 25-04-2016 IPR011970 Lytic murein transglycosylase SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 SUPERFAMILY SSF47090 334 407 6.02E-14 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 PANTHER PTHR30163 29 411 2.0E-218 T 25-04-2016 IPR011757 Lytic transglycosylase MltB SMD_RS21750 08f1330d822a05a82abd5ad698baa022 415 Pfam PF01471 Putative peptidoglycan binding domain 348 403 5.5E-8 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 SMART SM00636 29 375 8.2E-92 T 25-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 ProSitePatterns PS01095 Chitinases family 18 active site. 134 142 - T 25-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 SUPERFAMILY SSF54556 282 346 1.11E-12 T 25-04-2016 IPR029070 Chitinase insertion domain SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 Pfam PF00704 Glycosyl hydrolases family 18 33 375 1.3E-66 T 25-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 PANTHER PTHR11177 6 380 7.0E-101 T 25-04-2016 SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 Gene3D G3DSA:3.20.20.80 352 385 6.4E-77 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 Gene3D G3DSA:3.20.20.80 8 283 6.4E-77 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 SUPERFAMILY SSF51445 20 282 1.78E-74 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 SUPERFAMILY SSF51445 347 381 1.78E-74 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS15365 dfba42bb96622684158ceed8d008bb2e 396 Gene3D G3DSA:3.10.50.10 284 346 9.1E-14 T 25-04-2016 IPR029070 Chitinase insertion domain SMD_RS03770 14389ea729e921ee16705d6e69409793 312 Pfam PF00850 Histone deacetylase domain 18 302 5.6E-76 T 25-04-2016 IPR023801 Histone deacetylase domain SMD_RS03770 14389ea729e921ee16705d6e69409793 312 Gene3D G3DSA:3.40.800.20 2 303 8.0E-97 T 25-04-2016 IPR023801 Histone deacetylase domain SMD_RS03770 14389ea729e921ee16705d6e69409793 312 PANTHER PTHR10625:SF104 18 307 2.0E-90 T 25-04-2016 SMD_RS03770 14389ea729e921ee16705d6e69409793 312 PRINTS PR01270 Histone deacetylase superfamily signature 118 141 1.0E-16 T 25-04-2016 IPR000286 Histone deacetylase superfamily SMD_RS03770 14389ea729e921ee16705d6e69409793 312 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 1.0E-16 T 25-04-2016 IPR000286 Histone deacetylase superfamily SMD_RS03770 14389ea729e921ee16705d6e69409793 312 PRINTS PR01270 Histone deacetylase superfamily signature 152 167 1.0E-16 T 25-04-2016 IPR000286 Histone deacetylase superfamily SMD_RS03770 14389ea729e921ee16705d6e69409793 312 PANTHER PTHR10625 18 307 2.0E-90 T 25-04-2016 IPR000286 Histone deacetylase superfamily SMD_RS03770 14389ea729e921ee16705d6e69409793 312 SUPERFAMILY SSF52768 1 306 7.19E-98 T 25-04-2016 SMD_RS17960 ee903926015a5a368a2972c47e920692 124 Pfam PF07238 PilZ domain 9 112 1.2E-8 T 25-04-2016 IPR009875 PilZ domain GO:0035438 SMD_RS17960 ee903926015a5a368a2972c47e920692 124 Gene3D G3DSA:2.40.10.220 27 112 3.6E-4 T 25-04-2016 SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 Pfam PF00593 TonB dependent receptor 481 746 1.4E-29 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 Gene3D G3DSA:2.40.170.20 165 747 3.4E-88 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 Gene3D G3DSA:2.170.130.10 52 164 3.4E-10 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 150 3.5E-9 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 SUPERFAMILY SSF56935 33 747 1.28E-90 T 25-04-2016 SMD_RS14495 242ed8d487cc71831fe7c0088f410861 747 PANTHER PTHR32552 7 747 1.2E-32 T 25-04-2016 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 PANTHER PTHR32552 483 681 2.7E-102 T 25-04-2016 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 PANTHER PTHR32552 12 461 2.7E-102 T 25-04-2016 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 Gene3D G3DSA:2.40.170.20 177 681 1.5E-105 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 SUPERFAMILY SSF56935 45 681 3.4E-135 T 25-04-2016 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 Pfam PF00593 TonB dependent receptor 427 679 3.0E-38 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 54 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 PANTHER PTHR32552:SF15 483 681 2.7E-102 T 25-04-2016 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 PANTHER PTHR32552:SF15 12 461 2.7E-102 T 25-04-2016 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 Gene3D G3DSA:2.170.130.10 39 176 5.5E-43 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS19260 14fe32a0a0501dc2e892104a21f72bc7 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 172 8.8E-31 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS01760 37b5b20ad23cca03a0aa7b234a085b41 119 PIRSF PIRSF007028 1 117 2.0E-51 T 25-04-2016 IPR009874 Protein of unknown function DUF1428 SMD_RS01760 37b5b20ad23cca03a0aa7b234a085b41 119 SUPERFAMILY SSF54909 1 116 3.32E-52 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS01760 37b5b20ad23cca03a0aa7b234a085b41 119 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 7.6E-46 T 25-04-2016 IPR009874 Protein of unknown function DUF1428 SMD_RS01760 37b5b20ad23cca03a0aa7b234a085b41 119 Gene3D G3DSA:3.30.70.900 1 116 6.1E-55 T 25-04-2016 SMD_RS02180 b9f0636631726164c5b21883247a6c36 490 Pfam PF01841 Transglutaminase-like superfamily 306 409 1.2E-15 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS02180 b9f0636631726164c5b21883247a6c36 490 PANTHER PTHR38339 23 476 1.5E-25 T 25-04-2016 SMD_RS02180 b9f0636631726164c5b21883247a6c36 490 SUPERFAMILY SSF54001 292 426 1.68E-17 T 25-04-2016 SMD_RS02180 b9f0636631726164c5b21883247a6c36 490 SMART SM00460 348 412 1.1E-12 T 25-04-2016 IPR002931 Transglutaminase-like SMD_RS17060 453c0c3caea227fef5fa4cfdb27893d0 169 PANTHER PTHR35861:SF2 1 169 2.9E-77 T 25-04-2016 SMD_RS17060 453c0c3caea227fef5fa4cfdb27893d0 169 PANTHER PTHR35861 1 169 2.9E-77 T 25-04-2016 SMD_RS17060 453c0c3caea227fef5fa4cfdb27893d0 169 Pfam PF04985 Phage tail tube protein FII 4 168 1.6E-65 T 25-04-2016 IPR006498 Tail tube protein SMD_RS17060 453c0c3caea227fef5fa4cfdb27893d0 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 168 7.1E-62 T 25-04-2016 IPR006498 Tail tube protein SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 SUPERFAMILY SSF46785 3 112 2.5E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 Pfam PF03466 LysR substrate binding domain 89 288 2.3E-40 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 Gene3D G3DSA:1.10.10.10 3 85 4.1E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 SUPERFAMILY SSF53850 89 290 7.42E-45 T 25-04-2016 SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.4E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 Gene3D G3DSA:3.40.190.10 92 176 5.0E-25 T 25-04-2016 SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 Gene3D G3DSA:3.40.190.10 177 256 5.4E-22 T 25-04-2016 SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 PANTHER PTHR30537:SF5 1 291 7.0E-107 T 25-04-2016 SMD_RS05320 3c230ea2cd9b5ae00da4d166cd6e4bd4 291 PANTHER PTHR30537 1 291 7.0E-107 T 25-04-2016 SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.8E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.8E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 5.8E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.8E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.8E-22 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 SUPERFAMILY SSF51735 6 254 9.87E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PANTHER PTHR24319 1 253 6.5E-58 T 25-04-2016 SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 Gene3D G3DSA:3.40.50.720 4 254 6.8E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 PANTHER PTHR24319:SF23 1 253 6.5E-58 T 25-04-2016 SMD_RS20865 21871c2da64c4b53938e6ae91b3615f0 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 7.6E-39 T 25-04-2016 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 PANTHER PTHR10209 2 308 2.9E-111 T 25-04-2016 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 PANTHER PTHR10209:SF146 2 308 2.9E-111 T 25-04-2016 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 PRINTS PR00682 Isopenicillin N synthase signature 23 40 9.7E-9 T 25-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 PRINTS PR00682 Isopenicillin N synthase signature 190 211 9.7E-9 T 25-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 PRINTS PR00682 Isopenicillin N synthase signature 226 252 9.7E-9 T 25-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 172 270 1.3E-15 T 25-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 SUPERFAMILY SSF51197 2 307 2.2E-87 T 25-04-2016 SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 4 121 1.7E-32 T 25-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain SMD_RS15500 9d703fd623034e3c2945862e3de4d13d 311 Gene3D G3DSA:2.60.120.330 2 307 1.2E-89 T 25-04-2016 IPR027443 Isopenicillin N synthase-like SMD_RS12565 8018321118c637d3def5389e8a355a01 538 Gene3D G3DSA:2.40.160.50 152 537 2.6E-62 T 25-04-2016 SMD_RS12565 8018321118c637d3def5389e8a355a01 538 Gene3D G3DSA:3.10.20.310 37 113 6.5E-9 T 25-04-2016 SMD_RS12565 8018321118c637d3def5389e8a355a01 538 Pfam PF01103 Surface antigen 218 537 2.6E-10 T 25-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SMD_RS12565 8018321118c637d3def5389e8a355a01 538 Pfam PF08479 POTRA domain, ShlB-type 41 112 4.6E-14 T 25-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type SMD_RS12565 8018321118c637d3def5389e8a355a01 538 PANTHER PTHR34597:SF1 28 538 1.5E-93 T 25-04-2016 SMD_RS12565 8018321118c637d3def5389e8a355a01 538 PANTHER PTHR34597 28 538 1.5E-93 T 25-04-2016 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 207 3.6E-29 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 Gene3D G3DSA:1.10.10.10 151 208 2.4E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 Gene3D G3DSA:1.10.1740.10 30 123 6.5E-28 T 25-04-2016 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 PANTHER PTHR30173 21 211 7.8E-41 T 25-04-2016 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 SUPERFAMILY SSF88659 143 208 1.12E-13 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 SUPERFAMILY SSF88946 31 130 2.67E-24 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 Pfam PF04542 Sigma-70 region 2 50 116 2.4E-13 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS21340 f72519c42bc441b8b7fc706f13237bdd 217 Pfam PF08281 Sigma-70, region 4 152 201 1.3E-12 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Gene3D G3DSA:4.10.860.10 620 671 2.8E-17 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 SUPERFAMILY SSF52540 4 415 3.7E-131 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Pfam PF04851 Type III restriction enzyme, res subunit 16 97 9.7E-9 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 SMART SM00487 9 426 1.4E-25 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 SMART SM00490 460 546 1.1E-20 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Pfam PF12344 Ultra-violet resistance protein B 552 593 4.9E-22 T 25-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 SUPERFAMILY SSF52540 459 584 1.89E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 SUPERFAMILY SSF52540 37 82 1.89E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Gene3D G3DSA:3.30.2060.10 161 233 1.5E-10 T 25-04-2016 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Gene3D G3DSA:3.40.50.300 419 582 1.8E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 PANTHER PTHR24029 1 671 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Pfam PF02151 UvrB/uvrC motif 638 670 1.6E-9 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Gene3D G3DSA:3.40.50.300 278 338 4.3E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Gene3D G3DSA:3.40.50.300 5 89 4.3E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Gene3D G3DSA:3.40.50.300 388 407 4.3E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Pfam PF00271 Helicase conserved C-terminal domain 442 545 5.6E-19 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.797 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMD_RS07610 b35456a6227a292348ab21dea24c2e21 674 SUPERFAMILY SSF46600 625 671 4.45E-11 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMD_RS08040 cf257467eaf93d80cc4b0d39b8b99c5b 199 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 61 164 1.0E-41 T 25-04-2016 IPR022260 Integrating conjugative element protein PilL, PFGI-1 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.1E-57 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 PIRSF PIRSF006293 1 221 9.4E-78 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 PANTHER PTHR11587 1 221 2.8E-107 T 25-04-2016 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 PANTHER PTHR11587:SF3 1 221 2.8E-107 T 25-04-2016 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 SUPERFAMILY SSF52402 1 220 1.04E-61 T 25-04-2016 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.6E-76 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 Gene3D G3DSA:3.40.50.620 1 221 4.2E-76 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS17170 c5956d1a8ae64cefe68a109600f724ea 221 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 54.816 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMD_RS13145 a652a338cc6225bf12d3f94da123c459 344 SMART SM00858 47 107 2.9E-8 T 25-04-2016 IPR013974 SAF domain SMD_RS13145 a652a338cc6225bf12d3f94da123c459 344 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 109 249 2.6E-27 T 25-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain SMD_RS13145 a652a338cc6225bf12d3f94da123c459 344 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 12 338 1.1E-46 T 25-04-2016 IPR017592 Pilus assembly, Flp-type CpaB SMD_RS13145 a652a338cc6225bf12d3f94da123c459 344 Pfam PF08666 SAF domain 48 106 3.2E-8 T 25-04-2016 IPR013974 SAF domain SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 SUPERFAMILY SSF56935 672 941 6.96E-99 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 SUPERFAMILY SSF56935 368 430 6.96E-99 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 SUPERFAMILY SSF56935 480 629 6.96E-99 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 SUPERFAMILY SSF56935 37 229 6.96E-99 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 SUPERFAMILY SSF56935 291 339 6.96E-99 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Gene3D G3DSA:2.170.130.10 52 167 1.0E-33 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Gene3D G3DSA:2.40.170.20 482 617 5.6E-92 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Gene3D G3DSA:2.40.170.20 290 330 5.6E-92 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Gene3D G3DSA:2.40.170.20 370 433 5.6E-92 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Gene3D G3DSA:2.40.170.20 168 236 5.6E-92 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Gene3D G3DSA:2.40.170.20 667 941 5.6E-92 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 1.8E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 PANTHER PTHR30069:SF7 10 658 4.1E-125 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 PANTHER PTHR30069:SF7 874 914 4.1E-125 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 PANTHER PTHR30069:SF7 682 855 4.1E-125 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 PANTHER PTHR30069 10 658 4.1E-125 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 PANTHER PTHR30069 874 914 4.1E-125 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 PANTHER PTHR30069 682 855 4.1E-125 T 25-04-2016 SMD_RS01660 4f223feb59c9d11236b3b2444b47fee2 941 Pfam PF00593 TonB dependent receptor 587 937 1.7E-31 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12580 4ec432756e419adeec78e8150d673b78 148 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 6 146 2.9E-30 T 25-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 SMD_RS12580 4ec432756e419adeec78e8150d673b78 148 Pfam PF13633 Prokaryotic N-terminal methylation site 6 26 8.9E-9 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12580 4ec432756e419adeec78e8150d673b78 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 7.7E-9 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12580 4ec432756e419adeec78e8150d673b78 148 Gene3D G3DSA:3.55.40.10 39 101 5.4E-10 T 25-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SMD_RS12580 4ec432756e419adeec78e8150d673b78 148 Pfam PF12019 Type II transport protein GspH 44 136 8.0E-7 T 25-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SMD_RS12580 4ec432756e419adeec78e8150d673b78 148 SUPERFAMILY SSF54523 8 139 2.59E-13 T 25-04-2016 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 Gene3D G3DSA:3.30.590.10 129 450 3.1E-96 T 25-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 SUPERFAMILY SSF55931 125 462 9.51E-109 T 25-04-2016 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 Pfam PF00120 Glutamine synthetase, catalytic domain 126 459 1.9E-106 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 Gene3D G3DSA:3.10.20.70 20 128 6.0E-21 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 PANTHER PTHR20852:SF63 21 465 1.3E-197 T 25-04-2016 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 PANTHER PTHR20852 21 465 1.3E-197 T 25-04-2016 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 25-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 SMART SM01230 125 384 2.4E-108 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS07385 b83f5261008aa284df9c8e829e4a164a 465 SUPERFAMILY SSF54368 20 124 3.53E-23 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 Pfam PF03466 LysR substrate binding domain 96 298 4.5E-40 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 7.8E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 7.8E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 7.8E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 PANTHER PTHR30537 3 298 2.8E-85 T 25-04-2016 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 Gene3D G3DSA:3.40.190.10 183 266 5.2E-16 T 25-04-2016 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 Gene3D G3DSA:3.40.190.10 99 182 7.8E-21 T 25-04-2016 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 SUPERFAMILY SSF46785 10 117 5.0E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 SUPERFAMILY SSF53850 97 301 1.72E-41 T 25-04-2016 SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 Gene3D G3DSA:1.10.10.10 10 91 1.1E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13255 5f1c3a9b305947fbaa09d2de14299164 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 8.1E-21 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 4.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.1E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 PANTHER PTHR24322 5 132 1.2E-17 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 PANTHER PTHR24322 149 181 1.2E-17 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 SUPERFAMILY SSF51735 4 217 5.37E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 Pfam PF00106 short chain dehydrogenase 4 185 6.4E-21 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10055 638ea7643ab2291a75feaede99c3d281 238 Gene3D G3DSA:3.40.50.720 1 221 5.7E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14930 07697644dc9be20869908571c4543f13 431 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMD_RS14930 07697644dc9be20869908571c4543f13 431 Gene3D G3DSA:1.10.275.10 18 109 2.2E-25 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMD_RS14930 07697644dc9be20869908571c4543f13 431 PANTHER PTHR11444 29 389 1.2E-106 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14930 07697644dc9be20869908571c4543f13 431 SUPERFAMILY SSF48557 22 400 2.98E-85 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMD_RS14930 07697644dc9be20869908571c4543f13 431 Pfam PF00206 Lyase 34 301 2.3E-45 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal SMD_RS14930 07697644dc9be20869908571c4543f13 431 Gene3D G3DSA:1.20.200.10 110 388 3.3E-59 T 25-04-2016 SMD_RS14930 07697644dc9be20869908571c4543f13 431 TIGRFAM TIGR00838 argH: argininosuccinate lyase 24 390 5.7E-85 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 3.7E-32 T 25-04-2016 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 3.7E-32 T 25-04-2016 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.7E-32 T 25-04-2016 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 3.7E-32 T 25-04-2016 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 3.7E-32 T 25-04-2016 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PANTHER PTHR11444:SF3 29 389 1.2E-106 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14930 07697644dc9be20869908571c4543f13 431 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 30.004 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 1.4E-13 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 1.4E-13 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS14930 07697644dc9be20869908571c4543f13 431 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 1.4E-13 T 25-04-2016 IPR000362 Fumarate lyase family SMD_RS02825 2733a7462f9800a332021e92f0b47a4d 120 Gene3D G3DSA:3.30.479.10 1 117 3.6E-40 T 25-04-2016 SMD_RS02825 2733a7462f9800a332021e92f0b47a4d 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 2.8E-36 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMD_RS02825 2733a7462f9800a332021e92f0b47a4d 120 SUPERFAMILY SSF55620 1 117 6.67E-40 T 25-04-2016 SMD_RS02825 2733a7462f9800a332021e92f0b47a4d 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 1.8E-32 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMD_RS02825 2733a7462f9800a332021e92f0b47a4d 120 PANTHER PTHR12589 1 118 5.5E-51 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMD_RS02825 2733a7462f9800a332021e92f0b47a4d 120 PIRSF PIRSF006113 1 118 2.2E-48 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 SUPERFAMILY SSF56935 395 879 3.97E-104 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 SUPERFAMILY SSF56935 39 237 3.97E-104 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 SUPERFAMILY SSF56935 308 356 3.97E-104 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 PANTHER PTHR30069:SF7 10 295 9.2E-110 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 PANTHER PTHR30069:SF7 311 750 9.2E-110 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 Gene3D G3DSA:2.170.130.10 51 172 1.9E-34 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 169 3.3E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 PANTHER PTHR30069 10 295 9.2E-110 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 PANTHER PTHR30069 311 750 9.2E-110 T 25-04-2016 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 Gene3D G3DSA:2.40.170.20 173 235 2.9E-101 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 Gene3D G3DSA:2.40.170.20 290 879 2.9E-101 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02830 71b70c00ed30bab77ff243a0ad889643 879 Pfam PF00593 TonB dependent receptor 576 878 3.0E-34 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18885 839ae0fb7b19c0465b3f4b09a723ec26 312 PANTHER PTHR10584:SF15 1 306 2.7E-137 T 25-04-2016 SMD_RS18885 839ae0fb7b19c0465b3f4b09a723ec26 312 PANTHER PTHR10584 1 306 2.7E-137 T 25-04-2016 SMD_RS18885 839ae0fb7b19c0465b3f4b09a723ec26 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMD_RS18885 839ae0fb7b19c0465b3f4b09a723ec26 312 Gene3D G3DSA:3.40.1190.20 2 304 1.9E-56 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS18885 839ae0fb7b19c0465b3f4b09a723ec26 312 SUPERFAMILY SSF53613 2 297 2.34E-65 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS18885 839ae0fb7b19c0465b3f4b09a723ec26 312 Pfam PF00294 pfkB family carbohydrate kinase 36 290 5.4E-35 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMD_RS13060 27c5ab7cd623063d389b44d6d16ca27f 126 PANTHER PTHR35006 1 125 7.3E-54 T 25-04-2016 SMD_RS13060 27c5ab7cd623063d389b44d6d16ca27f 126 SUPERFAMILY SSF54593 2 124 1.11E-18 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS13060 27c5ab7cd623063d389b44d6d16ca27f 126 PANTHER PTHR35006:SF1 1 125 7.3E-54 T 25-04-2016 SMD_RS13060 27c5ab7cd623063d389b44d6d16ca27f 126 Gene3D G3DSA:3.10.180.10 1 122 1.0E-17 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 PANTHER PTHR11731 42 82 0.0 T 25-04-2016 SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 PANTHER PTHR11731 105 838 0.0 T 25-04-2016 SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 Pfam PF00326 Prolyl oligopeptidase family 669 827 1.1E-22 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 Gene3D G3DSA:2.120.10.30 113 226 2.5E-14 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 Gene3D G3DSA:2.120.10.30 308 507 2.5E-14 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 Gene3D G3DSA:3.40.50.1820 567 827 6.7E-49 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 SUPERFAMILY SSF82171 245 554 6.02E-22 T 25-04-2016 SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 SUPERFAMILY SSF82171 112 205 6.02E-22 T 25-04-2016 SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 SUPERFAMILY SSF53474 568 826 2.8E-45 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 PANTHER PTHR11731:SF117 42 82 0.0 T 25-04-2016 SMD_RS03575 6590a5f95e22985004b3aa079ef79e05 838 PANTHER PTHR11731:SF117 105 838 0.0 T 25-04-2016 SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 7.7E-22 T 25-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 7.7E-22 T 25-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 7.7E-22 T 25-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 7.7E-22 T 25-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.8E-24 T 25-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 3.8E-34 T 25-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PANTHER PTHR30487:SF0 1 35 1.2E-113 T 25-04-2016 SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PANTHER PTHR30487:SF0 56 281 1.2E-113 T 25-04-2016 SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PANTHER PTHR30487 1 35 1.2E-113 T 25-04-2016 SMD_RS17460 289a63ae37ca27e8862fb9e45c6b46d3 287 PANTHER PTHR30487 56 281 1.2E-113 T 25-04-2016 SMD_RS15845 55a14349f2c78a926db0a55d7862d87f 481 SUPERFAMILY SSF111283 24 479 9.94E-136 T 25-04-2016 SMD_RS15845 55a14349f2c78a926db0a55d7862d87f 481 PANTHER PTHR30624 9 481 3.9E-231 T 25-04-2016 SMD_RS15845 55a14349f2c78a926db0a55d7862d87f 481 PANTHER PTHR30624:SF4 9 481 3.9E-231 T 25-04-2016 SMD_RS15845 55a14349f2c78a926db0a55d7862d87f 481 Pfam PF01523 Putative modulator of DNA gyrase 40 331 2.2E-67 T 25-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS15845 55a14349f2c78a926db0a55d7862d87f 481 PIRSF PIRSF004919 20 480 1.9E-141 T 25-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS21745 df985c07bc14e68a92fdf8ea0e49ff99 296 PANTHER PTHR11122 14 290 9.2E-58 T 25-04-2016 SMD_RS21745 df985c07bc14e68a92fdf8ea0e49ff99 296 Gene3D G3DSA:2.70.98.10 12 283 2.7E-73 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMD_RS21745 df985c07bc14e68a92fdf8ea0e49ff99 296 Pfam PF01263 Aldose 1-epimerase 18 282 1.8E-37 T 25-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SMD_RS21745 df985c07bc14e68a92fdf8ea0e49ff99 296 SUPERFAMILY SSF74650 6 282 1.19E-57 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMD_RS21745 df985c07bc14e68a92fdf8ea0e49ff99 296 PIRSF PIRSF016020 16 290 2.8E-42 T 25-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 SMD_RS08550 1b59a10f15b7421579be7d2257b48103 601 SUPERFAMILY SSF69279 280 428 1.98E-6 T 25-04-2016 SMD_RS02510 39fd0910c97b4f15313a0b9c54182304 118 SUPERFAMILY SSF54909 1 117 1.61E-44 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS02510 39fd0910c97b4f15313a0b9c54182304 118 Gene3D G3DSA:3.30.70.900 1 117 3.4E-47 T 25-04-2016 SMD_RS02510 39fd0910c97b4f15313a0b9c54182304 118 PIRSF PIRSF007028 1 118 2.0E-48 T 25-04-2016 IPR009874 Protein of unknown function DUF1428 SMD_RS02510 39fd0910c97b4f15313a0b9c54182304 118 Pfam PF07237 Protein of unknown function (DUF1428) 3 103 2.7E-40 T 25-04-2016 IPR009874 Protein of unknown function DUF1428 SMD_RS18430 4074128ab88d0e82e4d16a87ff738987 424 Gene3D G3DSA:3.90.1150.10 248 406 8.9E-34 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS18430 4074128ab88d0e82e4d16a87ff738987 424 Pfam PF00155 Aminotransferase class I and II 39 389 2.1E-49 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS18430 4074128ab88d0e82e4d16a87ff738987 424 Gene3D G3DSA:3.40.640.10 57 247 6.0E-61 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS18430 4074128ab88d0e82e4d16a87ff738987 424 PANTHER PTHR11751 14 410 2.9E-158 T 25-04-2016 SMD_RS18430 4074128ab88d0e82e4d16a87ff738987 424 PANTHER PTHR11751:SF303 14 410 2.9E-158 T 25-04-2016 SMD_RS18430 4074128ab88d0e82e4d16a87ff738987 424 SUPERFAMILY SSF53383 9 405 9.34E-92 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 Pfam PF00561 alpha/beta hydrolase fold 36 296 7.0E-27 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 4.8E-119 T 25-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PANTHER PTHR10992:SF860 1 176 1.5E-112 T 25-04-2016 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PANTHER PTHR10992:SF860 214 311 1.5E-112 T 25-04-2016 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.7E-12 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.7E-12 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.7E-12 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 SUPERFAMILY SSF53474 2 298 1.35E-58 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PIRSF PIRSF006431 1 315 4.9E-126 T 25-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 4.6E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 4.6E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 4.6E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 Gene3D G3DSA:3.40.50.1820 8 306 2.1E-63 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PANTHER PTHR10992 1 176 1.5E-112 T 25-04-2016 SMD_RS12195 1c7b87499aac139521b7ed84c1aef97b 315 PANTHER PTHR10992 214 311 1.5E-112 T 25-04-2016 SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 SMART SM00869 828 1091 8.7E-26 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 PANTHER PTHR12338:SF5 784 1102 1.1E-51 T 25-04-2016 SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 PANTHER PTHR12338:SF5 609 717 1.1E-51 T 25-04-2016 SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 Pfam PF03212 Pertactin 597 714 1.2E-10 T 25-04-2016 IPR004899 Pertactin, central region SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 PANTHER PTHR12338 784 1102 1.1E-51 T 25-04-2016 SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 PANTHER PTHR12338 609 717 1.1E-51 T 25-04-2016 SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 Pfam PF03797 Autotransporter beta-domain 844 1085 1.0E-33 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 SUPERFAMILY SSF51126 280 721 7.85E-41 T 25-04-2016 IPR011050 Pectin lyase fold/virulence factor SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 Gene3D G3DSA:2.160.20.20 463 737 6.4E-74 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 Gene3D G3DSA:2.160.20.20 246 430 6.4E-74 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 Gene3D G3DSA:2.160.20.20 43 219 6.2E-4 T 25-04-2016 IPR012332 P22 tailspike C-terminal domain-like SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 Gene3D G3DSA:2.40.128.130 790 1102 1.3E-60 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 SUPERFAMILY SSF103515 798 1102 2.75E-38 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04040 744ed5287d543e4362644ee322fce4f2 1102 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 608 1102 7.6E-93 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 Gene3D G3DSA:3.10.290.10 24 75 2.7E-16 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 SUPERFAMILY SSF55120 83 256 4.32E-36 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 Pfam PF00849 RNA pseudouridylate synthase 87 222 2.0E-15 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 SUPERFAMILY SSF55174 21 110 2.8E-17 T 25-04-2016 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 PANTHER PTHR21600:SF2 12 333 3.8E-85 T 25-04-2016 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 SMART SM00363 24 82 7.6E-10 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 91 253 1.9E-49 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 PANTHER PTHR21600 12 333 3.8E-85 T 25-04-2016 SMD_RS14770 3c498116d6a26f32d0653907c5714073 545 Pfam PF01479 S4 domain 24 69 3.7E-11 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS17605 d49d4e7ea557fb2b67c8e45c2132621b 198 Gene3D G3DSA:3.40.630.30 23 194 3.7E-45 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS17605 d49d4e7ea557fb2b67c8e45c2132621b 198 SUPERFAMILY SSF55729 24 193 3.29E-39 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS17605 d49d4e7ea557fb2b67c8e45c2132621b 198 Pfam PF13302 Acetyltransferase (GNAT) domain 33 169 2.0E-22 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS17605 d49d4e7ea557fb2b67c8e45c2132621b 198 PANTHER PTHR23091 3 182 7.8E-35 T 25-04-2016 SMD_RS17605 d49d4e7ea557fb2b67c8e45c2132621b 198 PANTHER PTHR23091:SF190 3 182 7.8E-35 T 25-04-2016 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 372 380 - T 25-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PIRSF PIRSF038928 31 521 2.8E-216 T 25-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PANTHER PTHR11465 45 537 7.6E-282 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 SMART SM01060 46 430 3.2E-274 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PRINTS PR00067 Catalase signature 122 140 1.3E-66 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PRINTS PR00067 Catalase signature 59 82 1.3E-66 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PRINTS PR00067 Catalase signature 143 160 1.3E-66 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PRINTS PR00067 Catalase signature 162 180 1.3E-66 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PRINTS PR00067 Catalase signature 327 354 1.3E-66 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 PRINTS PR00067 Catalase signature 359 385 1.3E-66 T 25-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 Gene3D G3DSA:2.40.180.10 27 395 6.5E-170 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 Pfam PF00199 Catalase 46 427 1.9E-181 T 25-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 Pfam PF06628 Catalase-related immune-responsive 453 515 5.4E-22 T 25-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS06475 80807c24bbe4981a371fc543a956ee5a 547 SUPERFAMILY SSF56634 23 522 5.23E-205 T 25-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SMD_RS00605 44027d5d6e9c3dec7b648ac10538d12a 158 Gene3D G3DSA:3.40.50.1240 1 158 5.8E-47 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS00605 44027d5d6e9c3dec7b648ac10538d12a 158 PANTHER PTHR20935 1 101 1.7E-22 T 25-04-2016 SMD_RS00605 44027d5d6e9c3dec7b648ac10538d12a 158 SUPERFAMILY SSF53254 1 143 1.3E-27 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS00605 44027d5d6e9c3dec7b648ac10538d12a 158 SMART SM00855 3 114 6.9E-9 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS00605 44027d5d6e9c3dec7b648ac10538d12a 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 92 3.7E-13 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS09005 2e9abbc400f1b491c3a80764e92a0cda 269 SUPERFAMILY SSF53613 9 260 4.83E-75 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS09005 2e9abbc400f1b491c3a80764e92a0cda 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 255 1.2E-86 T 25-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SMD_RS09005 2e9abbc400f1b491c3a80764e92a0cda 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 254 2.8E-88 T 25-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SMD_RS09005 2e9abbc400f1b491c3a80764e92a0cda 269 PANTHER PTHR20858:SF17 1 263 3.4E-109 T 25-04-2016 SMD_RS09005 2e9abbc400f1b491c3a80764e92a0cda 269 Gene3D G3DSA:3.40.1190.20 9 258 1.3E-96 T 25-04-2016 IPR029056 Ribokinase-like SMD_RS09005 2e9abbc400f1b491c3a80764e92a0cda 269 PANTHER PTHR20858 1 263 3.4E-109 T 25-04-2016 SMD_RS03270 56927ba670ad15d53d2e518e9bdb6ce3 438 PIRSF PIRSF005353 1 438 6.9E-166 T 25-04-2016 IPR026033 Purine permease PbuG-like SMD_RS03270 56927ba670ad15d53d2e518e9bdb6ce3 438 PANTHER PTHR11119:SF9 2 427 8.5E-168 T 25-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SMD_RS03270 56927ba670ad15d53d2e518e9bdb6ce3 438 PANTHER PTHR11119 2 427 8.5E-168 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMD_RS03270 56927ba670ad15d53d2e518e9bdb6ce3 438 Pfam PF00860 Permease family 20 398 7.0E-46 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 145 5.3E-29 T 25-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PRINTS PR00481 Cytosol aminopeptidase signature 366 381 2.7E-50 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 2.7E-50 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 2.7E-50 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 2.7E-50 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 2.7E-50 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PANTHER PTHR11963 12 491 7.6E-207 T 25-04-2016 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 SUPERFAMILY SSF52949 3 179 4.71E-41 T 25-04-2016 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 35.35 T 25-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 SUPERFAMILY SSF53187 174 488 4.08E-118 T 25-04-2016 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 Gene3D G3DSA:3.40.630.10 167 488 1.0E-131 T 25-04-2016 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 342 349 - T 25-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 181 481 2.7E-114 T 25-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 PANTHER PTHR11963:SF13 12 491 7.6E-207 T 25-04-2016 SMD_RS03100 031517aeccc3942873a403c23ce903e7 492 Gene3D G3DSA:3.40.220.10 3 161 1.0E-48 T 25-04-2016 SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 ProSitePatterns PS00194 Thioredoxin family active site. 82 100 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 Gene3D G3DSA:3.40.30.10 23 189 1.2E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 Pfam PF08534 Redoxin 54 181 5.9E-16 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 PANTHER PTHR10681:SF107 22 191 1.4E-50 T 25-04-2016 SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 25 189 8.1E-52 T 25-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 PANTHER PTHR10681 22 191 1.4E-50 T 25-04-2016 SMD_RS14830 58bec33924d4d62eef5648559fb99ed9 205 SUPERFAMILY SSF52833 57 189 8.62E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 PANTHER PTHR10617:SF103 1 304 5.1E-56 T 25-04-2016 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 PANTHER PTHR10617:SF103 345 412 5.1E-56 T 25-04-2016 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 SUPERFAMILY SSF160996 204 305 7.59E-6 T 25-04-2016 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 Pfam PF03486 HI0933-like protein 11 406 3.9E-98 T 25-04-2016 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 32 412 2.5E-166 T 25-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 SUPERFAMILY SSF51905 10 198 8.46E-42 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 SUPERFAMILY SSF51905 352 410 8.46E-42 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 12 405 3.2E-85 T 25-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 PANTHER PTHR10617 1 304 5.1E-56 T 25-04-2016 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 PANTHER PTHR10617 345 412 5.1E-56 T 25-04-2016 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 Gene3D G3DSA:3.50.50.60 354 409 9.2E-37 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08675 1484d29f8e5fe91ed1763dcb54cc646e 415 Gene3D G3DSA:3.50.50.60 11 196 9.2E-37 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 12 335 2.2E-76 T 25-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 Gene3D G3DSA:3.20.20.70 9 365 5.1E-114 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 Gene3D G3DSA:3.50.50.60 366 470 4.7E-29 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 Gene3D G3DSA:3.50.50.60 476 629 4.7E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PANTHER PTHR22893:SF56 1 423 1.4E-249 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 SUPERFAMILY SSF51905 473 631 2.84E-20 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PANTHER PTHR22893 1 423 1.4E-249 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 SUPERFAMILY SSF51971 339 525 9.06E-43 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 381 655 1.4E-22 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 SUPERFAMILY SSF51395 9 366 8.38E-105 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 623 637 3.5E-6 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 404 3.5E-6 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 503 521 5.2E-11 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 383 402 5.2E-11 T 25-04-2016 SMD_RS04375 09bfca4a0b3dc943c41bac7e6a82b72d 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 622 638 5.2E-11 T 25-04-2016 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 PIRSF PIRSF005963 1 335 3.1E-137 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 332 1.8E-132 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 Gene3D G3DSA:3.20.20.70 67 327 1.7E-68 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 Pfam PF04055 Radical SAM superfamily 103 267 5.6E-16 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 Hamap MF_00206 Lipoyl synthase [lipA]. 50 336 149.391 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 PANTHER PTHR10949 34 327 1.0E-173 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 48 86 1.3E-8 T 25-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 SUPERFAMILY SSF102114 66 330 1.96E-65 T 25-04-2016 SMD_RS18820 937eb0b9e7fa64dffb5093b20067b3c7 336 SMART SM00729 97 305 1.4E-16 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS12000 50078e60498f81b0e679ffdaf0284d39 234 Gene3D G3DSA:3.90.70.10 62 187 6.4E-8 T 25-04-2016 SMD_RS12000 50078e60498f81b0e679ffdaf0284d39 234 Pfam PF03412 Peptidase C39 family 53 187 1.0E-17 T 25-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SMD_RS13640 e5b98b9886dd9b0b8e059bf04d155422 453 PANTHER PTHR11206:SF107 13 449 1.1E-95 T 25-04-2016 SMD_RS13640 e5b98b9886dd9b0b8e059bf04d155422 453 Pfam PF01554 MatE 254 414 1.7E-18 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS13640 e5b98b9886dd9b0b8e059bf04d155422 453 Pfam PF01554 MatE 25 184 6.9E-27 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS13640 e5b98b9886dd9b0b8e059bf04d155422 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 426 9.4E-55 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS13640 e5b98b9886dd9b0b8e059bf04d155422 453 PIRSF PIRSF006603 11 452 1.4E-83 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS13640 e5b98b9886dd9b0b8e059bf04d155422 453 PANTHER PTHR11206 13 449 1.1E-95 T 25-04-2016 SMD_RS17125 cb2a1991806f489cfca2f53e8b55a0c2 896 Pfam PF13155 Toprim-like 180 273 1.7E-11 T 25-04-2016 SMD_RS17125 cb2a1991806f489cfca2f53e8b55a0c2 896 Gene3D G3DSA:3.40.1360.10 170 280 2.2E-5 T 25-04-2016 SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 SUPERFAMILY SSF54197 1 110 9.78E-33 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 PRINTS PR00332 Histidine triad family signature 96 106 1.8E-19 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 PRINTS PR00332 Histidine triad family signature 6 22 1.8E-19 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 PRINTS PR00332 Histidine triad family signature 27 45 1.8E-19 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 PANTHER PTHR23089:SF2 3 119 6.5E-46 T 25-04-2016 SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 PANTHER PTHR23089 3 119 6.5E-46 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 25-04-2016 IPR019808 Histidine triad, conserved site SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 Gene3D G3DSA:3.30.428.10 2 110 8.2E-35 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMD_RS05105 2c227dab5555988cce133e1de490fa63 119 Pfam PF01230 HIT domain 12 108 3.6E-24 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PANTHER PTHR32472 1 457 2.3E-209 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 352 433 3.1E-10 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 SUPERFAMILY SSF52540 72 293 3.07E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 Gene3D G3DSA:3.30.230.10 290 458 2.0E-34 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 2.7E-192 T 25-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 SMART SM00382 94 247 5.1E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 Pfam PF13481 AAA domain 77 225 3.2E-15 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 SUPERFAMILY SSF54211 258 272 2.88E-41 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 SUPERFAMILY SSF54211 306 457 2.88E-41 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 177 201 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 86 114 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 216 244 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 251 277 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 325 348 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 10 34 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 PRINTS PR01874 DNA repair protein radA signature 127 144 8.8E-93 T 25-04-2016 SMD_RS06380 a0ff8b85cf6d0d32819c86eec41fdab0 458 Gene3D G3DSA:3.40.50.300 61 280 5.1E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 SUPERFAMILY SSF57716 218 269 2.65E-15 T 25-04-2016 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 PANTHER PTHR22993:SF15 1 270 1.5E-126 T 25-04-2016 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 SUPERFAMILY SSF46946 131 222 4.97E-30 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 25-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 Gene3D G3DSA:1.10.8.50 131 270 1.5E-50 T 25-04-2016 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 2.7E-8 T 25-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 PANTHER PTHR22993 1 270 1.5E-126 T 25-04-2016 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 4.5E-24 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.2E-33 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 Gene3D G3DSA:3.20.190.10 2 130 4.8E-39 T 25-04-2016 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 SMART SM00898 2 116 1.6E-53 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 SMART SM01232 130 222 4.7E-48 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 SUPERFAMILY SSF81624 2 135 6.54E-41 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 44.185 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SMD_RS00330 8baa52834f9e9d972c76bc845aa9897d 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.4E-87 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 SUPERFAMILY SSF64005 11 235 3.66E-84 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 Gene3D G3DSA:3.40.1180.10 11 246 5.7E-95 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 4.2E-76 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 25-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 40.31 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 6.2E-85 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMD_RS06995 ca356363168a43f6995d2afa75c4a5f8 255 PANTHER PTHR10291 12 252 3.3E-117 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 25-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 SUPERFAMILY SSF52540 5 165 2.5E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.723 T 25-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 Pfam PF01202 Shikimate kinase 13 166 7.2E-47 T 25-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PRINTS PR01100 Shikimate kinase family signature 59 67 3.9E-21 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PRINTS PR01100 Shikimate kinase family signature 31 44 3.9E-21 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PRINTS PR01100 Shikimate kinase family signature 7 22 3.9E-21 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PRINTS PR01100 Shikimate kinase family signature 77 86 3.9E-21 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PRINTS PR01100 Shikimate kinase family signature 98 115 3.9E-21 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PANTHER PTHR21087:SF0 6 178 3.8E-54 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 PANTHER PTHR21087 6 178 3.8E-54 T 25-04-2016 SMD_RS16525 d045447ffd23a384506aa7778bfef554 180 Gene3D G3DSA:3.40.50.300 4 169 5.6E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02005 49355983c967a8a57d53668c36a568b7 199 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 13 188 5.3E-22 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SMD_RS02005 49355983c967a8a57d53668c36a568b7 199 PANTHER PTHR36122:SF1 10 199 6.2E-35 T 25-04-2016 SMD_RS02005 49355983c967a8a57d53668c36a568b7 199 Pfam PF04973 Nicotinamide mononucleotide transporter 10 185 1.3E-48 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SMD_RS02005 49355983c967a8a57d53668c36a568b7 199 PANTHER PTHR36122 10 199 6.2E-35 T 25-04-2016 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 PANTHER PTHR11786 1 277 2.0E-50 T 25-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 SUPERFAMILY SSF54001 1 260 1.24E-72 T 25-04-2016 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 Gene3D G3DSA:3.30.2140.10 1 86 1.4E-41 T 25-04-2016 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 Gene3D G3DSA:3.30.2140.10 186 262 1.4E-41 T 25-04-2016 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 3.3E-12 T 25-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 103 128 3.3E-12 T 25-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 70 92 3.3E-12 T 25-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 3.3E-12 T 25-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SMD_RS19855 2a630fb367c8e5146da6b63854843111 279 Pfam PF00797 N-acetyltransferase 22 258 1.0E-59 T 25-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SMD_RS11650 6d0468e1a5eefc4df2f60e56e233d33a 313 SUPERFAMILY SSF56645 31 160 1.69E-9 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS11650 6d0468e1a5eefc4df2f60e56e233d33a 313 Gene3D G3DSA:2.40.110.10 97 158 5.3E-4 T 25-04-2016 SMD_RS01995 d233a46ebf308882b2610bd112860a6e 230 PANTHER PTHR22936 57 230 2.5E-39 T 25-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SMD_RS01995 d233a46ebf308882b2610bd112860a6e 230 Gene3D G3DSA:1.20.1540.10 14 217 3.4E-38 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS01995 d233a46ebf308882b2610bd112860a6e 230 SUPERFAMILY SSF144091 13 220 6.54E-35 T 25-04-2016 SMD_RS01995 d233a46ebf308882b2610bd112860a6e 230 Pfam PF01694 Rhomboid family 63 218 9.6E-36 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 PRINTS PR01755 Bacterial translocase SecF protein signature 244 259 2.4E-28 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 PRINTS PR01755 Bacterial translocase SecF protein signature 165 179 2.4E-28 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 2.4E-28 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 PRINTS PR01755 Bacterial translocase SecF protein signature 213 231 2.4E-28 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 111 293 5.7E-45 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 306 28.517 T 25-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 Pfam PF02355 Protein export membrane protein 122 301 6.1E-48 T 25-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 PANTHER PTHR30081 8 300 1.7E-65 T 25-04-2016 SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 296 3.2E-62 T 25-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 Gene3D G3DSA:1.20.1640.10 113 302 1.6E-16 T 25-04-2016 SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 SUPERFAMILY SSF82866 81 302 1.28E-30 T 25-04-2016 SMD_RS09575 b33f34f3e08750bc436e1c8564040f84 326 Pfam PF07549 SecD/SecF GG Motif 38 64 1.5E-9 T 25-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 SUPERFAMILY SSF55874 319 448 7.6E-31 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 448 4.6E-15 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 SMART SM00387 341 450 2.7E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 PANTHER PTHR24423:SF450 237 449 6.9E-33 T 25-04-2016 SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 SUPERFAMILY SSF47384 233 307 2.55E-5 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 Gene3D G3DSA:3.30.565.10 322 449 5.0E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 PANTHER PTHR24423 237 449 6.9E-33 T 25-04-2016 SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 8.0E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS19110 99215392b92f277f48fb09c2ae4d8669 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 8.0E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 PANTHER PTHR26402:SF571 13 204 7.2E-75 T 25-04-2016 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 Gene3D G3DSA:3.40.50.2300 15 151 1.4E-30 T 25-04-2016 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.0E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.0E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.0E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 Gene3D G3DSA:1.10.10.10 152 207 1.1E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 SUPERFAMILY SSF52172 15 153 7.12E-32 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 PANTHER PTHR26402 13 204 7.2E-75 T 25-04-2016 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 SMART SM00448 13 124 6.9E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 204 7.0E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 SMART SM00421 148 205 1.5E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 Pfam PF00072 Response regulator receiver domain 15 124 3.5E-25 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12245 5204908945ab7b3edbf4691897c4d92d 213 SUPERFAMILY SSF46894 139 208 1.5E-14 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 SUPERFAMILY SSF52540 4 224 1.73E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 Pfam PF00005 ABC transporter 24 172 2.5E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 SMART SM00382 33 221 4.1E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 PANTHER PTHR24220 6 224 2.3E-133 T 25-04-2016 SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 Gene3D G3DSA:3.40.50.300 4 223 2.1E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01680 d7a4c8313e93a13977235f489869fbeb 229 PANTHER PTHR24220:SF452 6 224 2.3E-133 T 25-04-2016 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PANTHER PTHR22939:SF101 37 409 9.1E-179 T 25-04-2016 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 Gene3D G3DSA:2.30.42.10 408 471 3.4E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 Pfam PF13365 Trypsin-like peptidase domain 108 243 8.4E-33 T 25-04-2016 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 SUPERFAMILY SSF50156 267 375 6.18E-21 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 Gene3D G3DSA:2.40.10.10 49 173 5.3E-33 T 25-04-2016 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 SUPERFAMILY SSF50156 402 468 5.65E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 469 2.3E-130 T 25-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 SUPERFAMILY SSF50494 57 282 3.95E-63 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PANTHER PTHR22939 37 409 9.1E-179 T 25-04-2016 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PRINTS PR00834 HtrA/DegQ protease family signature 139 159 8.0E-52 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 8.0E-52 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PRINTS PR00834 HtrA/DegQ protease family signature 118 130 8.0E-52 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 8.0E-52 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 8.0E-52 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 PRINTS PR00834 HtrA/DegQ protease family signature 179 203 8.0E-52 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 SMART SM00228 391 467 0.39 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 SMART SM00228 285 367 1.1E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 Gene3D G3DSA:2.40.10.10 174 286 6.2E-45 T 25-04-2016 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 Gene3D G3DSA:2.30.42.10 287 380 9.6E-26 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS01745 c51146aceb001d3d1fa3742e7d464f52 477 Pfam PF13180 PDZ domain 286 375 1.9E-11 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS00510 7aa5b95857528e5d31012d0ab23d06b8 104 Pfam PF11720 Peptidase inhibitor I78 family 43 104 1.6E-11 T 25-04-2016 IPR021719 Proteinase inhibitor I78 SMD_RS00510 7aa5b95857528e5d31012d0ab23d06b8 104 Gene3D G3DSA:3.30.10.10 49 98 1.7E-7 T 25-04-2016 SMD_RS16600 9ee46676714467aaf827154922b381b8 343 SUPERFAMILY SSF53474 38 332 1.64E-48 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16600 9ee46676714467aaf827154922b381b8 343 PANTHER PTHR32268 44 333 2.3E-24 T 25-04-2016 SMD_RS16600 9ee46676714467aaf827154922b381b8 343 PIRSF PIRSF000443 20 343 3.9E-63 T 25-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMD_RS16600 9ee46676714467aaf827154922b381b8 343 Gene3D G3DSA:3.40.50.1820 45 334 8.2E-28 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16600 9ee46676714467aaf827154922b381b8 343 Pfam PF00561 alpha/beta hydrolase fold 59 324 7.1E-16 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS16015 b6c9bfb8a518e91e948605d24988e0c9 448 SUPERFAMILY SSF53474 249 443 5.24E-24 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16015 b6c9bfb8a518e91e948605d24988e0c9 448 Pfam PF06057 Bacterial virulence protein (VirJ) 261 445 3.8E-76 T 25-04-2016 IPR010333 Bacterial virulence SMD_RS16015 b6c9bfb8a518e91e948605d24988e0c9 448 SUPERFAMILY SSF53474 38 191 6.07E-6 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16015 b6c9bfb8a518e91e948605d24988e0c9 448 Gene3D G3DSA:3.40.50.1820 259 408 2.6E-9 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16015 b6c9bfb8a518e91e948605d24988e0c9 448 PIRSF PIRSF029063 1 447 3.9E-143 T 25-04-2016 IPR011225 Type IV secretory pathway, VirJ component SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 PANTHER PTHR11731 95 657 5.2E-132 T 25-04-2016 SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 Pfam PF00326 Prolyl oligopeptidase family 439 646 9.0E-45 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 PANTHER PTHR11731:SF119 95 657 5.2E-132 T 25-04-2016 SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 Gene3D G3DSA:3.40.50.1820 334 646 1.5E-71 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 SUPERFAMILY SSF82171 32 292 2.94E-10 T 25-04-2016 SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 SUPERFAMILY SSF82171 337 383 2.94E-10 T 25-04-2016 SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 SUPERFAMILY SSF53474 392 646 3.24E-65 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 Gene3D G3DSA:2.120.10.30 193 286 1.2E-4 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS06075 46d1cf328ee84c132fb9bbd40ac3734b 662 Gene3D G3DSA:2.120.10.30 34 129 1.2E-4 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 15 256 3.5E-48 T 25-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 SUPERFAMILY SSF48452 64 227 3.22E-20 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 SMART SM00028 53 86 410.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 SMART SM00028 157 190 4.7 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 SMART SM00028 87 120 380.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 SMART SM00028 121 154 460.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 SMART SM00028 191 224 55.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 PANTHER PTHR23083 64 259 2.6E-20 T 25-04-2016 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 Pfam PF13432 Tetratricopeptide repeat 167 222 9.6E-4 T 25-04-2016 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 Pfam PF13432 Tetratricopeptide repeat 58 119 6.2E-6 T 25-04-2016 SMD_RS09770 edb912d8213f42faa5611645cfc92d24 261 Gene3D G3DSA:1.25.40.10 53 259 1.4E-30 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS13025 25ef97154ec0a24ab18ff06de9bdcffe 108 SUPERFAMILY SSF52833 5 105 3.38E-18 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13025 25ef97154ec0a24ab18ff06de9bdcffe 108 PANTHER PTHR10438 2 108 2.4E-12 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS13025 25ef97154ec0a24ab18ff06de9bdcffe 108 Gene3D G3DSA:3.40.30.10 5 105 5.3E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS13025 25ef97154ec0a24ab18ff06de9bdcffe 108 Pfam PF00085 Thioredoxin 6 105 1.1E-11 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMD_RS04300 8cc57af033df0ee6b6bec89fd91ee02c 168 SUPERFAMILY SSF158442 12 160 1.15E-41 T 25-04-2016 SMD_RS04300 8cc57af033df0ee6b6bec89fd91ee02c 168 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 22.564 T 25-04-2016 IPR022920 Disulphide bond formation protein DsbB SMD_RS04300 8cc57af033df0ee6b6bec89fd91ee02c 168 PANTHER PTHR36570 6 164 1.7E-51 T 25-04-2016 SMD_RS04300 8cc57af033df0ee6b6bec89fd91ee02c 168 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 1.4E-38 T 25-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SMD_RS04300 8cc57af033df0ee6b6bec89fd91ee02c 168 Gene3D G3DSA:1.20.1550.10 8 167 1.4E-48 T 25-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain SMD_RS04300 8cc57af033df0ee6b6bec89fd91ee02c 168 PANTHER PTHR36570:SF1 6 164 1.7E-51 T 25-04-2016 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 SUPERFAMILY SSF51366 1 217 1.55E-73 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 PIRSF PIRSF001461 1 224 9.9E-103 T 25-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 PANTHER PTHR11749:SF7 2 223 1.4E-129 T 25-04-2016 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 217 4.6E-96 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.1E-92 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 PANTHER PTHR11749 2 223 1.4E-129 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMD_RS20295 f1cd58fe8f39168080960fbbf40c2bae 225 Gene3D G3DSA:3.20.20.70 2 223 2.8E-94 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 SUPERFAMILY SSF56784 19 249 1.53E-39 T 25-04-2016 IPR023214 HAD-like domain SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 20 209 4.7E-19 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 Gene3D G3DSA:3.40.50.1000 18 93 1.4E-37 T 25-04-2016 IPR023214 HAD-like domain SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 Gene3D G3DSA:3.40.50.1000 171 249 1.4E-37 T 25-04-2016 IPR023214 HAD-like domain SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 Pfam PF02358 Trehalose-phosphatase 21 236 1.7E-37 T 25-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 248 6.4E-37 T 25-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SMD_RS17375 8e15862818e45f91cccee5c25f434f9e 252 PANTHER PTHR10788 19 249 2.9E-27 T 25-04-2016 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 PANTHER PTHR30069:SF4 41 726 3.3E-81 T 25-04-2016 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 PANTHER PTHR30069 41 726 3.3E-81 T 25-04-2016 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 Pfam PF00593 TonB dependent receptor 527 829 5.2E-23 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 SUPERFAMILY SSF56935 661 858 6.72E-97 T 25-04-2016 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 SUPERFAMILY SSF56935 49 261 6.72E-97 T 25-04-2016 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 SUPERFAMILY SSF56935 298 622 6.72E-97 T 25-04-2016 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 Gene3D G3DSA:2.170.130.10 62 187 4.9E-30 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 185 1.5E-21 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 Gene3D G3DSA:2.40.170.20 188 637 3.1E-77 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS09985 87f86b2c0e5c3f343524feb4331d6916 858 Gene3D G3DSA:2.40.170.20 673 858 3.1E-77 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 PANTHER PTHR30346 1 291 2.2E-88 T 25-04-2016 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-22 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 PANTHER PTHR30346:SF6 1 291 2.2E-88 T 25-04-2016 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 Gene3D G3DSA:3.40.190.10 89 175 3.5E-21 T 25-04-2016 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 SUPERFAMILY SSF46785 1 85 1.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 Pfam PF03466 LysR substrate binding domain 87 291 1.1E-34 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 Gene3D G3DSA:3.40.190.10 176 262 1.1E-17 T 25-04-2016 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-11 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-11 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-11 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 SUPERFAMILY SSF53850 88 292 2.04E-34 T 25-04-2016 SMD_RS07760 aa41cc16e7472487a292eeabb60871e4 296 Gene3D G3DSA:1.10.10.10 1 86 9.3E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19475 13658a7d9127f07803424f84b0be1c6f 148 SUPERFAMILY SSF55298 13 146 3.61E-22 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS19475 13658a7d9127f07803424f84b0be1c6f 148 Gene3D G3DSA:3.30.1330.40 6 146 1.0E-28 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS19475 13658a7d9127f07803424f84b0be1c6f 148 Pfam PF01042 Endoribonuclease L-PSP 18 145 9.6E-16 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS19475 13658a7d9127f07803424f84b0be1c6f 148 PANTHER PTHR11803 22 146 9.0E-15 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.0E-13 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 SUPERFAMILY SSF46689 9 81 9.48E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 Gene3D G3DSA:1.10.357.10 6 201 3.9E-36 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 6.5E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 6.5E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 SUPERFAMILY SSF48498 89 201 1.98E-12 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 PANTHER PTHR30055:SF27 4 201 1.4E-32 T 25-04-2016 SMD_RS01245 d862032ca90936d7c4f520a51360cabe 205 PANTHER PTHR30055 4 201 1.4E-32 T 25-04-2016 SMD_RS01270 103449ef0e16411f887f50a81fe872e6 366 PANTHER PTHR12169:SF11 1 365 9.2E-173 T 25-04-2016 SMD_RS01270 103449ef0e16411f887f50a81fe872e6 366 PANTHER PTHR12169 1 365 9.2E-173 T 25-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SMD_RS01270 103449ef0e16411f887f50a81fe872e6 366 Gene3D G3DSA:3.40.50.300 51 176 8.2E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01270 103449ef0e16411f887f50a81fe872e6 366 Hamap MF_01919 Cell division protein ZapE [zapE]. 6 366 48.044 T 25-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 SMD_RS01270 103449ef0e16411f887f50a81fe872e6 366 SUPERFAMILY SSF52540 53 185 9.65E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS01270 103449ef0e16411f887f50a81fe872e6 366 Pfam PF03969 AFG1-like ATPase 7 361 1.7E-122 T 25-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SMD_RS00810 7c55dc2da646fe5452756db768352514 167 PANTHER PTHR11717 4 156 1.5E-29 T 25-04-2016 SMD_RS00810 7c55dc2da646fe5452756db768352514 167 SUPERFAMILY SSF52788 4 138 1.96E-36 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS00810 7c55dc2da646fe5452756db768352514 167 Gene3D G3DSA:3.40.50.270 2 120 4.8E-35 T 25-04-2016 SMD_RS00810 7c55dc2da646fe5452756db768352514 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 114 2.1E-16 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS00810 7c55dc2da646fe5452756db768352514 167 PANTHER PTHR11717:SF18 4 156 1.5E-29 T 25-04-2016 SMD_RS00810 7c55dc2da646fe5452756db768352514 167 SMART SM00226 3 139 1.3E-24 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS00600 f3cc4922f0a4cce4c104d28b1a88d224 209 SUPERFAMILY SSF52540 1 207 4.23E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00600 f3cc4922f0a4cce4c104d28b1a88d224 209 PIRSF PIRSF009320 1 207 1.3E-28 T 25-04-2016 SMD_RS00600 f3cc4922f0a4cce4c104d28b1a88d224 209 PANTHER PTHR13696 1 208 2.3E-23 T 25-04-2016 SMD_RS00600 f3cc4922f0a4cce4c104d28b1a88d224 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 155 2.9E-20 T 25-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMD_RS00600 f3cc4922f0a4cce4c104d28b1a88d224 209 Gene3D G3DSA:3.40.50.300 2 205 2.9E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17980 382c79827a7ff663d8029d50969c715c 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 4.0E-29 T 25-04-2016 IPR012662 Conserved hypothetical protein CHP02449 SMD_RS17900 4520233228393111390d87fe16609849 215 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 9 207 1.4E-57 T 25-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SMD_RS17900 4520233228393111390d87fe16609849 215 PANTHER PTHR30074 8 214 5.9E-58 T 25-04-2016 SMD_RS17900 4520233228393111390d87fe16609849 215 SUPERFAMILY SSF81342 7 210 2.35E-52 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMD_RS17900 4520233228393111390d87fe16609849 215 Gene3D G3DSA:1.20.950.20 7 212 3.5E-64 T 25-04-2016 SMD_RS17900 4520233228393111390d87fe16609849 215 Pfam PF01292 Prokaryotic cytochrome b561 12 188 3.1E-25 T 25-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 SUPERFAMILY SSF55031 222 328 3.27E-28 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 PANTHER PTHR11014 38 435 1.8E-142 T 25-04-2016 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 SUPERFAMILY SSF53187 340 432 3.14E-80 T 25-04-2016 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 SUPERFAMILY SSF53187 28 236 3.14E-80 T 25-04-2016 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 PANTHER PTHR11014:SF63 38 435 1.8E-142 T 25-04-2016 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 PIRSF PIRSF005962 25 435 2.5E-116 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 Gene3D G3DSA:3.30.70.360 220 339 8.9E-33 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 40 419 2.2E-100 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 Pfam PF01546 Peptidase family M20/M25/M40 97 423 3.3E-31 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 Pfam PF07687 Peptidase dimerisation domain 226 322 7.0E-9 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 Gene3D G3DSA:3.40.630.10 340 432 2.2E-97 T 25-04-2016 SMD_RS20105 94869bdee752ff21bdcfc6e64d330062 439 Gene3D G3DSA:3.40.630.10 23 217 2.2E-97 T 25-04-2016 SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 PANTHER PTHR10996 5 313 5.4E-122 T 25-04-2016 SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 Gene3D G3DSA:3.40.50.720 119 293 1.0E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 SUPERFAMILY SSF52283 5 140 1.53E-29 T 25-04-2016 SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 313 5.3E-20 T 25-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 SUPERFAMILY SSF51735 104 292 8.03E-61 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 PANTHER PTHR10996:SF118 5 313 5.4E-122 T 25-04-2016 SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 291 3.0E-61 T 25-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 Gene3D G3DSA:3.40.50.720 6 118 1.8E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS15600 cc51d4282c09f76784184bd38411f0e6 345 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 152 180 - T 25-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 PANTHER PTHR11699 6 453 9.5E-242 T 25-04-2016 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 PANTHER PTHR11699:SF28 6 453 9.5E-242 T 25-04-2016 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 Gene3D G3DSA:3.40.309.10 242 426 4.4E-58 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 Gene3D G3DSA:3.40.605.10 2 241 3.6E-75 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 Pfam PF00171 Aldehyde dehydrogenase family 2 451 4.3E-137 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS07410 bcfc98b378688f757275b570e61f701b 454 SUPERFAMILY SSF53720 2 453 3.14E-139 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS15770 9964ef9269f861cea36116a638aaaf81 306 SUPERFAMILY SSF103481 54 156 2.09E-13 T 25-04-2016 SMD_RS15770 9964ef9269f861cea36116a638aaaf81 306 SUPERFAMILY SSF103481 217 304 1.22E-13 T 25-04-2016 SMD_RS15770 9964ef9269f861cea36116a638aaaf81 306 PANTHER PTHR12715:SF5 14 303 6.3E-71 T 25-04-2016 SMD_RS15770 9964ef9269f861cea36116a638aaaf81 306 Pfam PF00892 EamA-like transporter family 167 302 1.5E-16 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS15770 9964ef9269f861cea36116a638aaaf81 306 Pfam PF00892 EamA-like transporter family 19 152 3.1E-14 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS15770 9964ef9269f861cea36116a638aaaf81 306 PANTHER PTHR12715 14 303 6.3E-71 T 25-04-2016 SMD_RS06600 1d0566cd918f0f0c04f4701a6c3bafea 278 PANTHER PTHR11614:SF89 6 267 5.4E-39 T 25-04-2016 SMD_RS06600 1d0566cd918f0f0c04f4701a6c3bafea 278 SUPERFAMILY SSF53474 10 263 4.63E-35 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06600 1d0566cd918f0f0c04f4701a6c3bafea 278 PANTHER PTHR11614 6 267 5.4E-39 T 25-04-2016 SMD_RS06600 1d0566cd918f0f0c04f4701a6c3bafea 278 Gene3D G3DSA:3.40.50.1820 8 266 4.4E-49 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06600 1d0566cd918f0f0c04f4701a6c3bafea 278 Pfam PF12146 Serine aminopeptidase, S33 16 251 9.7E-22 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS12720 faeff6e8569d38d346f8366594037746 222 PANTHER PTHR24220 31 220 4.9E-58 T 25-04-2016 SMD_RS12720 faeff6e8569d38d346f8366594037746 222 Gene3D G3DSA:3.40.50.300 14 220 6.6E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12720 faeff6e8569d38d346f8366594037746 222 Pfam PF00005 ABC transporter 22 168 1.3E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS12720 faeff6e8569d38d346f8366594037746 222 SMART SM00382 27 218 5.2E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS12720 faeff6e8569d38d346f8366594037746 222 SUPERFAMILY SSF52540 15 220 2.06E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 SUPERFAMILY SSF46626 192 308 2.61E-15 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 Pfam PF00034 Cytochrome c 192 301 7.1E-5 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 Pfam PF00034 Cytochrome c 46 143 5.6E-5 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 Pfam PF00034 Cytochrome c 330 414 1.2E-5 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 Gene3D G3DSA:1.10.760.10 330 435 2.5E-22 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 SUPERFAMILY SSF46626 38 169 8.42E-21 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 PIRSF PIRSF000018 13 446 7.3E-146 T 25-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 SUPERFAMILY SSF46626 331 432 6.04E-20 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 PANTHER PTHR35008 41 432 1.1E-160 T 25-04-2016 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 Gene3D G3DSA:1.10.760.10 42 143 2.5E-16 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 Gene3D G3DSA:1.10.760.10 192 301 2.2E-11 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS08955 6ef5ec81443f4bd0191345b04d029e7d 448 PANTHER PTHR35008:SF3 41 432 1.1E-160 T 25-04-2016 SMD_RS10000 38a6c79836d26a29d8f8ce27cf95d985 325 Pfam PF00296 Luciferase-like monooxygenase 18 290 7.9E-24 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10000 38a6c79836d26a29d8f8ce27cf95d985 325 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 317 1.4E-98 T 25-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 SMD_RS10000 38a6c79836d26a29d8f8ce27cf95d985 325 PANTHER PTHR30137:SF6 1 319 6.4E-71 T 25-04-2016 SMD_RS10000 38a6c79836d26a29d8f8ce27cf95d985 325 Gene3D G3DSA:3.20.20.30 4 317 1.6E-69 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10000 38a6c79836d26a29d8f8ce27cf95d985 325 PANTHER PTHR30137 1 319 6.4E-71 T 25-04-2016 SMD_RS10000 38a6c79836d26a29d8f8ce27cf95d985 325 SUPERFAMILY SSF51679 5 316 1.44E-60 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PIRSF PIRSF000724 1 391 3.2E-132 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 Gene3D G3DSA:3.40.50.1270 175 376 3.8E-84 T 25-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 Pfam PF00162 Phosphoglycerate kinase 6 378 5.7E-140 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PANTHER PTHR11406 1 391 8.1E-201 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 SUPERFAMILY SSF53748 3 387 2.24E-144 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 25-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.748 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.6E-80 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS17665 3d3e1ef406abcffadf905a896fce31a4 391 Gene3D G3DSA:3.40.50.1260 5 174 6.5E-62 T 25-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMD_RS03825 1c318624e9f01275c211e8db079173cc 87 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 1.1E-12 T 25-04-2016 IPR018551 Domain of unknown function DUF2007 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 Pfam PF13533 Biotin-lipoyl like 44 82 5.5E-8 T 25-04-2016 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 Pfam PF13437 HlyD family secretion protein 199 278 1.2E-10 T 25-04-2016 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 SUPERFAMILY SSF111369 37 104 2.22E-6 T 25-04-2016 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 PANTHER PTHR32347 17 318 3.7E-41 T 25-04-2016 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 47 67 4.3E-7 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 303 318 4.3E-7 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 PANTHER PTHR32347:SF12 17 318 3.7E-41 T 25-04-2016 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 Gene3D G3DSA:2.40.50.100 196 228 4.9E-12 T 25-04-2016 SMD_RS07450 c22f91dbdfd07b3b1f795966b642ac65 318 Gene3D G3DSA:2.40.50.100 40 69 4.9E-12 T 25-04-2016 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 Pfam PF14718 Soluble lytic murein transglycosylase L domain 405 463 5.5E-12 T 25-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 Gene3D G3DSA:1.10.530.10 475 631 1.1E-49 T 25-04-2016 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 SUPERFAMILY SSF53955 482 640 8.44E-47 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 Gene3D G3DSA:1.25.20.10 31 386 1.1E-85 T 25-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 Gene3D G3DSA:1.10.1240.20 405 461 1.4E-9 T 25-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 SUPERFAMILY SSF48435 31 477 6.15E-102 T 25-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 PANTHER PTHR21666 465 651 6.4E-43 T 25-04-2016 SMD_RS18670 7e4667b148058790a2aebddc9366bc6e 661 Pfam PF01464 Transglycosylase SLT domain 484 597 1.9E-25 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 Gene3D G3DSA:1.10.3080.10 21 442 9.9E-55 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 Pfam PF00654 Voltage gated chloride channel 105 422 2.0E-53 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 PANTHER PTHR11689 18 588 2.7E-63 T 25-04-2016 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 PRINTS PR00762 Chloride channel signature 337 357 9.9E-8 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 PRINTS PR00762 Chloride channel signature 372 388 9.9E-8 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 PRINTS PR00762 Chloride channel signature 174 193 9.9E-8 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 SUPERFAMILY SSF54631 453 578 2.63E-11 T 25-04-2016 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 PANTHER PTHR11689:SF14 18 588 2.7E-63 T 25-04-2016 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 SUPERFAMILY SSF81340 17 443 1.31E-78 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMD_RS13090 edeadb0e11459f6070c2729cfc4ea64c 590 Gene3D G3DSA:3.10.580.10 451 564 1.7E-9 T 25-04-2016 SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PANTHER PTHR24322 11 142 4.9E-59 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PANTHER PTHR24322 168 200 4.9E-59 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 169 0.0062 T 25-04-2016 SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 6.8E-32 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.8E-32 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 6.8E-32 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.8E-32 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.8E-32 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 SUPERFAMILY SSF51735 3 226 4.97E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 Gene3D G3DSA:3.40.50.720 3 245 9.2E-73 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 1.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS09325 c9275ca4356a909638e25957e06321ae 245 Pfam PF00106 short chain dehydrogenase 7 208 9.6E-55 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18530 4dac80c5e886c9ef498be934565fc9f8 276 SUPERFAMILY SSF53474 1 274 6.28E-91 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS18530 4dac80c5e886c9ef498be934565fc9f8 276 PANTHER PTHR10061 1 276 3.2E-173 T 25-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SMD_RS18530 4dac80c5e886c9ef498be934565fc9f8 276 Gene3D G3DSA:3.40.50.1820 2 274 8.3E-82 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS18530 4dac80c5e886c9ef498be934565fc9f8 276 Pfam PF00756 Putative esterase 21 265 8.1E-67 T 25-04-2016 IPR000801 Putative esterase SMD_RS18530 4dac80c5e886c9ef498be934565fc9f8 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 7.4E-128 T 25-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Pfam PF08245 Mur ligase middle domain 110 311 1.8E-46 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 486 33.717 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 PANTHER PTHR23135:SF4 10 500 1.5E-184 T 25-04-2016 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Gene3D G3DSA:3.40.1190.10 101 336 6.6E-81 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 PANTHER PTHR23135 10 500 1.5E-184 T 25-04-2016 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 416 1.5E-18 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 486 6.2E-147 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 SUPERFAMILY SSF53623 101 332 8.11E-75 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 SUPERFAMILY SSF63418 5 99 3.27E-19 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 SUPERFAMILY SSF53244 333 487 9.42E-46 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Pfam PF01225 Mur ligase family, catalytic domain 24 98 1.5E-9 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Gene3D G3DSA:3.90.190.20 337 479 3.0E-53 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS03440 4b73aa09dd767e5940f697a7464cfb65 502 Gene3D G3DSA:3.40.1390.10 6 99 2.6E-19 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 Gene3D G3DSA:2.140.10.30 46 508 6.2E-45 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 SUPERFAMILY SSF82171 211 506 2.62E-24 T 25-04-2016 SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 PANTHER PTHR11731 153 794 3.0E-96 T 25-04-2016 SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 149 485 1.8E-30 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 Pfam PF00326 Prolyl oligopeptidase family 579 783 1.1E-29 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 Gene3D G3DSA:3.40.50.1820 518 783 3.0E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 SUPERFAMILY SSF53474 518 782 5.13E-40 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01765 7c76e900daf09731ca7acc5a628970ca 800 PANTHER PTHR11731:SF118 153 794 3.0E-96 T 25-04-2016 SMD_RS17030 7cb9546868939076488a2e6ea805c3cf 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 8 149 4.4E-45 T 25-04-2016 IPR006521 Tail protein I SMD_RS17030 7cb9546868939076488a2e6ea805c3cf 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 8 146 2.0E-55 T 25-04-2016 IPR006521 Tail protein I SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 PANTHER PTHR11002:SF20 1 208 3.3E-116 T 25-04-2016 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 25-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 SMART SM00947 30 193 6.3E-71 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 Gene3D G3DSA:3.40.1050.10 2 205 2.8E-77 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 SUPERFAMILY SSF53056 2 209 1.57E-75 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 25-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 PANTHER PTHR11002 1 208 3.3E-116 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14280 e05b4d6441ec23cce29bd3b46b5cc348 220 Pfam PF00484 Carbonic anhydrase 37 189 1.5E-51 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMD_RS14030 8a2d2f0bad570806c5b207ab474d283e 334 Pfam PF04471 Restriction endonuclease 41 149 1.0E-9 T 25-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 SMD_RS14030 8a2d2f0bad570806c5b207ab474d283e 334 Gene3D G3DSA:3.40.1350.10 36 149 6.6E-8 T 25-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMD_RS07275 ff7bb02b68e7519a32caf869ec90fd38 260 PANTHER PTHR11941:SF54 6 257 2.6E-96 T 25-04-2016 SMD_RS07275 ff7bb02b68e7519a32caf869ec90fd38 260 PANTHER PTHR11941 6 257 2.6E-96 T 25-04-2016 SMD_RS07275 ff7bb02b68e7519a32caf869ec90fd38 260 SUPERFAMILY SSF52096 6 259 5.36E-88 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS07275 ff7bb02b68e7519a32caf869ec90fd38 260 Gene3D G3DSA:3.90.226.10 6 258 1.7E-89 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS07275 ff7bb02b68e7519a32caf869ec90fd38 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 1.1E-66 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS07275 ff7bb02b68e7519a32caf869ec90fd38 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 25-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 ProSitePatterns PS00202 Rubredoxin signature. 41 51 - T 25-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 PIRSF PIRSF000071 8 63 6.8E-25 T 25-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 PRINTS PR00163 Rubredoxin signature 11 27 2.1E-7 T 25-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 PRINTS PR00163 Rubredoxin signature 41 57 2.1E-7 T 25-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 Gene3D G3DSA:2.20.28.10 9 62 3.0E-25 T 25-04-2016 IPR004039 Rubredoxin-type fold SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 SUPERFAMILY SSF57802 8 62 1.33E-22 T 25-04-2016 SMD_RS18015 2c174fbc4292a41f8383af1ca4d7185b 63 Pfam PF00301 Rubredoxin 12 57 3.5E-22 T 25-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 Gene3D G3DSA:3.40.30.10 4 183 1.6E-58 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.3E-93 T 25-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 Pfam PF00578 AhpC/TSA family 5 132 3.3E-30 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 SUPERFAMILY SSF52833 2 186 4.16E-52 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 6.0E-6 T 25-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 PIRSF PIRSF000239 1 187 2.7E-45 T 25-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 PANTHER PTHR10681:SF121 1 187 9.0E-86 T 25-04-2016 SMD_RS03855 3a2ee3083db6ba3a221d40ffe140a537 187 PANTHER PTHR10681 1 187 9.0E-86 T 25-04-2016 SMD_RS07550 3bafb2fc23d06a72feaecaee5a36ee9c 106 SUPERFAMILY SSF52833 3 103 9.4E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07550 3bafb2fc23d06a72feaecaee5a36ee9c 106 Pfam PF00462 Glutaredoxin 17 81 1.7E-16 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SMD_RS07550 3bafb2fc23d06a72feaecaee5a36ee9c 106 PIRSF PIRSF005894 1 106 1.6E-44 T 25-04-2016 IPR014434 Monothiol glutaredoxin SMD_RS07550 3bafb2fc23d06a72feaecaee5a36ee9c 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 2.2E-40 T 25-04-2016 IPR004480 Monothiol glutaredoxin-related SMD_RS07550 3bafb2fc23d06a72feaecaee5a36ee9c 106 PANTHER PTHR10293 5 103 4.5E-46 T 25-04-2016 IPR004480 Monothiol glutaredoxin-related SMD_RS07550 3bafb2fc23d06a72feaecaee5a36ee9c 106 Gene3D G3DSA:3.40.30.10 7 102 1.1E-29 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS16285 1728edfbdd7805602b085f91974146ea 693 PANTHER PTHR30252:SF3 5 693 0.0 T 25-04-2016 SMD_RS16285 1728edfbdd7805602b085f91974146ea 693 PANTHER PTHR30252 5 693 0.0 T 25-04-2016 SMD_RS16285 1728edfbdd7805602b085f91974146ea 693 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 466 594 4.3E-36 T 25-04-2016 IPR025299 CstA, C-terminal domain SMD_RS16285 1728edfbdd7805602b085f91974146ea 693 Pfam PF02554 Carbon starvation protein CstA 31 408 6.9E-167 T 25-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 SMD_RS09600 bb1b5ed1a5c6559035dbd28d2a385dbe 289 SUPERFAMILY SSF55120 70 281 1.8E-51 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS09600 bb1b5ed1a5c6559035dbd28d2a385dbe 289 PANTHER PTHR11079:SF61 6 285 2.2E-91 T 25-04-2016 SMD_RS09600 bb1b5ed1a5c6559035dbd28d2a385dbe 289 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 125 139 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS09600 bb1b5ed1a5c6559035dbd28d2a385dbe 289 Pfam PF00849 RNA pseudouridylate synthase 86 232 1.3E-23 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS09600 bb1b5ed1a5c6559035dbd28d2a385dbe 289 PANTHER PTHR11079 6 285 2.2E-91 T 25-04-2016 SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 25-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 Gene3D G3DSA:3.30.1340.10 1 87 1.8E-29 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 25-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.1E-31 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 PANTHER PTHR33705:SF2 1 89 2.4E-40 T 25-04-2016 SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.2E-16 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.2E-16 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.2E-16 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 PANTHER PTHR33705 1 89 2.4E-40 T 25-04-2016 SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 SUPERFAMILY SSF55594 3 88 1.96E-26 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS05415 b548946d0980a627d02eb335c27420e6 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.4E-25 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMD_RS06400 c805df6d95916f5a7ca4ff7bd20f201a 264 PANTHER PTHR38034 1 261 2.6E-81 T 25-04-2016 SMD_RS06400 c805df6d95916f5a7ca4ff7bd20f201a 264 Pfam PF01578 Cytochrome C assembly protein 41 257 9.4E-32 T 25-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 PANTHER PTHR21091:SF2 9 360 1.7E-151 T 25-04-2016 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 26 35 - T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 PANTHER PTHR21091 9 360 1.7E-151 T 25-04-2016 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 356 3.0E-138 T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 10 358 49.985 T 25-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 13 355 1.1E-129 T 25-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 146 162 - T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 Gene3D G3DSA:3.20.20.210 6 358 4.7E-153 T 25-04-2016 SMD_RS16540 910e62d6a80478defccb960aef3c7ddd 360 SUPERFAMILY SSF51726 7 359 9.77E-120 T 25-04-2016 SMD_RS00460 5e5404fe6c106d2bc9d12d52cc50abc2 129 Pfam PF11720 Peptidase inhibitor I78 family 65 129 2.5E-19 T 25-04-2016 IPR021719 Proteinase inhibitor I78 SMD_RS00460 5e5404fe6c106d2bc9d12d52cc50abc2 129 PANTHER PTHR39600 1 129 1.2E-18 T 25-04-2016 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 SUPERFAMILY SSF46689 8 82 1.09E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 PANTHER PTHR30055:SF62 1 191 1.7E-55 T 25-04-2016 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 PANTHER PTHR30055 1 191 1.7E-55 T 25-04-2016 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 SUPERFAMILY SSF48498 79 190 2.86E-23 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 Gene3D G3DSA:1.10.357.10 9 190 1.9E-34 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 8.8E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 8.8E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS09960 d541d041cf8bbc3a5909ca8f65612d7f 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.4E-12 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 Gene3D G3DSA:3.40.50.850 1 209 4.6E-65 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 SUPERFAMILY SSF52499 1 210 2.35E-62 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PRINTS PR01398 Isochorismatase signature 112 134 9.9E-36 T 25-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PRINTS PR01398 Isochorismatase signature 63 80 9.9E-36 T 25-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PRINTS PR01398 Isochorismatase signature 186 203 9.9E-36 T 25-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PRINTS PR01398 Isochorismatase signature 168 186 9.9E-36 T 25-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PRINTS PR01398 Isochorismatase signature 80 99 9.9E-36 T 25-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PRINTS PR01398 Isochorismatase signature 2 14 9.9E-36 T 25-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 Pfam PF00857 Isochorismatase family 32 205 3.1E-39 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PANTHER PTHR11080:SF4 6 210 5.8E-82 T 25-04-2016 SMD_RS12935 ffea4fe6992e69ed05e01e17cee1c1a8 210 PANTHER PTHR11080 6 210 5.8E-82 T 25-04-2016 SMD_RS10665 b62e322b0892035af9c6ec0fe2ce250a 198 PANTHER PTHR35147:SF2 1 197 3.9E-104 T 25-04-2016 SMD_RS10665 b62e322b0892035af9c6ec0fe2ce250a 198 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 18 169 29.838 T 25-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SMD_RS10665 b62e322b0892035af9c6ec0fe2ce250a 198 PANTHER PTHR35147 1 197 3.9E-104 T 25-04-2016 SMD_RS10665 b62e322b0892035af9c6ec0fe2ce250a 198 Pfam PF03975 CheD chemotactic sensory transduction 65 165 2.1E-33 T 25-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SMD_RS10665 b62e322b0892035af9c6ec0fe2ce250a 198 SUPERFAMILY SSF64438 24 169 1.28E-50 T 25-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SMD_RS14615 244f3a42993960f73ecb43771835442e 159 PIRSF PIRSF000303 1 159 1.8E-62 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14615 244f3a42993960f73ecb43771835442e 159 PRINTS PR01011 Glutathione peroxidase family signature 123 132 9.0E-20 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14615 244f3a42993960f73ecb43771835442e 159 PRINTS PR01011 Glutathione peroxidase family signature 22 39 9.0E-20 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14615 244f3a42993960f73ecb43771835442e 159 PRINTS PR01011 Glutathione peroxidase family signature 57 73 9.0E-20 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14615 244f3a42993960f73ecb43771835442e 159 SUPERFAMILY SSF52833 2 159 3.31E-60 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14615 244f3a42993960f73ecb43771835442e 159 Gene3D G3DSA:3.40.30.10 3 159 5.8E-67 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14615 244f3a42993960f73ecb43771835442e 159 PANTHER PTHR11592 1 159 5.7E-82 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14615 244f3a42993960f73ecb43771835442e 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 25-04-2016 IPR029759 Glutathione peroxidase active site SMD_RS14615 244f3a42993960f73ecb43771835442e 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 25-04-2016 IPR029760 Glutathione peroxidase conserved site SMD_RS14615 244f3a42993960f73ecb43771835442e 159 Pfam PF00255 Glutathione peroxidase 5 110 4.9E-39 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 SUPERFAMILY SSF49452 31 106 1.59E-7 T 25-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 Gene3D G3DSA:2.40.170.20 728 1026 1.8E-40 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 Gene3D G3DSA:2.40.170.20 638 679 1.8E-40 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 Gene3D G3DSA:2.40.170.20 253 585 1.8E-40 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 Gene3D G3DSA:2.170.130.10 117 252 1.8E-5 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 Pfam PF13620 Carboxypeptidase regulatory-like domain 47 106 2.4E-7 T 25-04-2016 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 Gene3D G3DSA:2.60.40.10 48 98 3.9E-4 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 SUPERFAMILY SSF56935 118 595 1.72E-59 T 25-04-2016 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 SUPERFAMILY SSF56935 950 1026 1.72E-59 T 25-04-2016 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 SUPERFAMILY SSF56935 635 676 1.72E-59 T 25-04-2016 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 SUPERFAMILY SSF56935 738 781 1.72E-59 T 25-04-2016 SMD_RS14740 cf8d44af9c517f333cedb96d3709fdbf 1026 SUPERFAMILY SSF56935 816 922 1.72E-59 T 25-04-2016 SMD_RS12880 45ee6eb0be041c4e3e199021ef13a791 128 PANTHER PTHR34299 6 127 4.4E-31 T 25-04-2016 SMD_RS12880 45ee6eb0be041c4e3e199021ef13a791 128 Pfam PF01219 Prokaryotic diacylglycerol kinase 26 126 6.6E-30 T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SMD_RS12880 45ee6eb0be041c4e3e199021ef13a791 128 Gene3D G3DSA:1.10.3830.10 13 127 2.1E-38 T 25-04-2016 SMD_RS12880 45ee6eb0be041c4e3e199021ef13a791 128 PANTHER PTHR34299:SF1 6 127 4.4E-31 T 25-04-2016 SMD_RS12880 45ee6eb0be041c4e3e199021ef13a791 128 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 79 90 - T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 Gene3D G3DSA:3.40.50.300 10 177 7.8E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 SUPERFAMILY SSF52540 10 179 1.82E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 Pfam PF07664 Ferrous iron transport protein B C terminus 400 452 2.9E-14 T 25-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 PANTHER PTHR11649 204 616 1.6E-246 T 25-04-2016 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 PANTHER PTHR11649 10 158 1.6E-246 T 25-04-2016 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 PANTHER PTHR11649:SF37 204 616 1.6E-246 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 PANTHER PTHR11649:SF37 10 158 1.6E-246 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 33 51 5.1E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 5.1E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 Pfam PF02421 Ferrous iron transport protein B 11 169 3.7E-54 T 25-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 Pfam PF07670 Nucleoside recognition 457 590 2.7E-25 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMD_RS10490 ec68b9b1cb02cef8fc30b517567f84cb 621 Pfam PF07670 Nucleoside recognition 289 382 2.2E-13 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMD_RS03415 e1da498e411aa830ca74afc118835123 262 PANTHER PTHR17985 2 248 3.5E-63 T 25-04-2016 IPR008551 Transport and Golgi organisation protein 2 SMD_RS03415 e1da498e411aa830ca74afc118835123 262 Pfam PF05742 Transport and Golgi organisation 2 1 248 7.5E-58 T 25-04-2016 IPR008551 Transport and Golgi organisation protein 2 SMD_RS03415 e1da498e411aa830ca74afc118835123 262 PANTHER PTHR17985:SF8 2 248 3.5E-63 T 25-04-2016 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 Gene3D G3DSA:2.40.230.10 117 383 6.3E-99 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 SUPERFAMILY SSF56931 120 384 7.32E-91 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PANTHER PTHR40457 26 384 3.6E-140 T 25-04-2016 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 Pfam PF02253 Phospholipase A1 118 380 4.9E-106 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 192 208 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 331 348 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 245 259 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 295 313 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 260 278 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 215 234 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 187 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS14570 ab120db1b57fafc103da8f9f2a8d8890 384 PRINTS PR01486 Bacterial phospholipase A1 protein signature 353 373 2.2E-35 T 25-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 PANTHER PTHR11938:SF101 1 80 1.3E-43 T 25-04-2016 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 SUPERFAMILY SSF54862 2 100 5.24E-24 T 25-04-2016 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.1E-17 T 25-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.1E-17 T 25-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.1E-17 T 25-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 PANTHER PTHR11938 1 80 1.3E-43 T 25-04-2016 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 Gene3D G3DSA:3.30.70.20 3 96 1.0E-21 T 25-04-2016 SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 Pfam PF00037 4Fe-4S binding domain 34 55 1.1E-7 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS09045 f7095e22a88d839fbdee046dbe0a366b 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 9.3E-20 T 25-04-2016 IPR022569 Ferredoxin, C-terminal SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 PANTHER PTHR33154 1 101 1.4E-26 T 25-04-2016 SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 PANTHER PTHR33154:SF5 1 101 1.4E-26 T 25-04-2016 SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 Pfam PF12840 Helix-turn-helix domain 10 69 2.5E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 SMART SM00418 8 88 6.5E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 Gene3D G3DSA:1.10.10.10 2 98 1.5E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.0E-5 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.0E-5 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.0E-5 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS00815 63f2bdd905fe09b36c5533b8860e014b 109 SUPERFAMILY SSF46785 3 93 2.07E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10745 1b08a4b797ad32ef51236069fbaf31e6 201 SUPERFAMILY SSF75708 34 200 3.4E-37 T 25-04-2016 SMD_RS10745 1b08a4b797ad32ef51236069fbaf31e6 201 Gene3D G3DSA:1.10.287.500 64 112 1.2E-10 T 25-04-2016 SMD_RS10745 1b08a4b797ad32ef51236069fbaf31e6 201 Gene3D G3DSA:1.10.287.500 118 157 4.4E-11 T 25-04-2016 SMD_RS10745 1b08a4b797ad32ef51236069fbaf31e6 201 Pfam PF04344 Chemotaxis phosphatase, CheZ 44 110 1.6E-9 T 25-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SMD_RS10745 1b08a4b797ad32ef51236069fbaf31e6 201 Pfam PF04344 Chemotaxis phosphatase, CheZ 119 200 2.7E-14 T 25-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SMD_RS14665 a7a791f998643a3e210bd56c824a0bd7 150 Gene3D G3DSA:3.10.450.30 60 142 4.8E-38 T 25-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 SMD_RS14665 a7a791f998643a3e210bd56c824a0bd7 150 Pfam PF00545 ribonuclease 60 140 1.5E-28 T 25-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 SMD_RS14665 a7a791f998643a3e210bd56c824a0bd7 150 SUPERFAMILY SSF53933 57 142 5.67E-32 T 25-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 SMD_RS02925 ed9b8627d9c27f3ee98434e4a6c3728b 117 PANTHER PTHR38459 3 117 6.8E-14 T 25-04-2016 SMD_RS02925 ed9b8627d9c27f3ee98434e4a6c3728b 117 PIRSF PIRSF006298 1 115 3.4E-37 T 25-04-2016 IPR016480 Glucose translocase, bactoprenol-linked SMD_RS02925 ed9b8627d9c27f3ee98434e4a6c3728b 117 Pfam PF04138 GtrA-like protein 5 113 5.7E-15 T 25-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SMD_RS16005 e88252720e60a298e807366081fb87c7 115 PANTHER PTHR11803 1 115 1.3E-30 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS16005 e88252720e60a298e807366081fb87c7 115 Pfam PF01042 Endoribonuclease L-PSP 12 113 8.4E-24 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS16005 e88252720e60a298e807366081fb87c7 115 SUPERFAMILY SSF55298 4 115 1.24E-28 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS16005 e88252720e60a298e807366081fb87c7 115 Gene3D G3DSA:3.30.1330.40 10 115 4.3E-25 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS16005 e88252720e60a298e807366081fb87c7 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 25-04-2016 IPR019897 RidA, conserved site SMD_RS16005 e88252720e60a298e807366081fb87c7 115 PANTHER PTHR11803:SF11 1 115 1.3E-30 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 SUPERFAMILY SSF143865 6 272 1.09E-72 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 Gene3D G3DSA:3.30.460.20 7 148 2.0E-38 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 SUPERFAMILY SSF144083 276 337 7.19E-16 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 PANTHER PTHR21535 35 340 1.2E-56 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 Gene3D G3DSA:1.20.58.340 265 340 1.6E-20 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 Gene3D G3DSA:1.20.58.340 149 261 3.9E-39 T 25-04-2016 SMD_RS07415 2d5dae66dac2f03049d699c5d31f0993 340 Pfam PF01544 CorA-like Mg2+ transporter protein 49 336 3.5E-57 T 25-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624:SF67 552 769 0.0 T 25-04-2016 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624:SF67 362 534 0.0 T 25-04-2016 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624:SF67 75 293 0.0 T 25-04-2016 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624:SF67 788 872 0.0 T 25-04-2016 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 Gene3D G3DSA:3.40.50.970 58 467 3.4E-144 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 SUPERFAMILY SSF52518 58 466 2.5E-130 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 888 0.0 T 25-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 Gene3D G3DSA:3.40.50.970 471 703 1.3E-109 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 Gene3D G3DSA:3.40.50.920 706 888 1.4E-73 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 SUPERFAMILY SSF52922 700 888 2.92E-57 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 217 292 4.0E-7 T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 SUPERFAMILY SSF52518 472 699 5.15E-90 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PIRSF PIRSF000156 1 890 0.0 T 25-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624 552 769 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624 362 534 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624 75 293 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS08915 f7d3b957eec7c29f658a6336875a2fbb 891 PANTHER PTHR11624 788 872 0.0 T 25-04-2016 IPR033247 Transketolase family SMD_RS03105 a7ac15fe17259618ba8868b4aa021c2f 362 PANTHER PTHR33529 1 362 6.7E-98 T 25-04-2016 SMD_RS03105 a7ac15fe17259618ba8868b4aa021c2f 362 PANTHER PTHR33529:SF2 1 362 6.7E-98 T 25-04-2016 SMD_RS03105 a7ac15fe17259618ba8868b4aa021c2f 362 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 350 2.1E-72 T 25-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SMD_RS03105 a7ac15fe17259618ba8868b4aa021c2f 362 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 350 2.1E-107 T 25-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 SMD_RS21075 44dfe2f62694c66020b3b958414bdd88 248 SMART SM00382 30 221 4.4E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS21075 44dfe2f62694c66020b3b958414bdd88 248 PANTHER PTHR24220:SF432 3 244 5.6E-110 T 25-04-2016 SMD_RS21075 44dfe2f62694c66020b3b958414bdd88 248 Gene3D G3DSA:3.40.50.300 1 229 7.0E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21075 44dfe2f62694c66020b3b958414bdd88 248 PANTHER PTHR24220 3 244 5.6E-110 T 25-04-2016 SMD_RS21075 44dfe2f62694c66020b3b958414bdd88 248 Pfam PF00005 ABC transporter 22 165 1.3E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS21075 44dfe2f62694c66020b3b958414bdd88 248 SUPERFAMILY SSF52540 2 226 5.43E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SUPERFAMILY SSF48452 431 560 3.42E-11 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Pfam PF13283 Bacteriophage N adsorption protein A C-term 823 939 5.2E-22 T 25-04-2016 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Gene3D G3DSA:1.25.40.10 40 98 4.5E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Gene3D G3DSA:1.25.40.10 140 207 4.5E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SUPERFAMILY SSF48452 220 325 7.21E-10 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Gene3D G3DSA:1.25.40.10 490 559 7.5E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Gene3D G3DSA:1.25.40.10 241 324 2.0E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Gene3D G3DSA:1.25.40.10 365 373 2.0E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SMART SM00028 496 529 67.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SMART SM00028 144 177 160.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SMART SM00028 261 294 19.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SMART SM00028 426 459 61.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SMART SM00028 35 68 180.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 Gene3D G3DSA:1.25.40.10 431 489 4.7E-6 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SUPERFAMILY SSF48452 37 107 4.43E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03260 ead4d0d68ba0a382cd46ff8c0d7a8c94 944 SUPERFAMILY SSF48452 146 236 4.43E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02010 a6f5a5d58ca0e8a505e797bc9445447c 357 Gene3D G3DSA:3.40.50.620 8 188 5.7E-16 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS02010 a6f5a5d58ca0e8a505e797bc9445447c 357 SUPERFAMILY SSF52374 9 71 1.05E-6 T 25-04-2016 SMD_RS02010 a6f5a5d58ca0e8a505e797bc9445447c 357 PANTHER PTHR37512 5 354 1.1E-35 T 25-04-2016 SMD_RS02010 a6f5a5d58ca0e8a505e797bc9445447c 357 Gene3D G3DSA:3.40.50.300 189 339 3.4E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02010 a6f5a5d58ca0e8a505e797bc9445447c 357 Pfam PF13521 AAA domain 182 335 4.1E-33 T 25-04-2016 SMD_RS02010 a6f5a5d58ca0e8a505e797bc9445447c 357 SUPERFAMILY SSF52540 181 319 1.94E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 Gene3D G3DSA:3.20.20.70 1 262 1.7E-109 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 5.0E-98 T 25-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 PANTHER PTHR22854 1 261 1.4E-117 T 25-04-2016 SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.867 T 25-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 25-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 SUPERFAMILY SSF51366 12 262 7.06E-92 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS20260 f60cb7c7fdb9583c7ec92da51ab676ac 264 PANTHER PTHR22854:SF2 1 261 1.4E-117 T 25-04-2016 SMD_RS05225 5365db3c584ffa7a7dd8bedfeb704b5b 365 PANTHER PTHR35243 1 254 8.3E-82 T 25-04-2016 SMD_RS05225 5365db3c584ffa7a7dd8bedfeb704b5b 365 PANTHER PTHR35243:SF10 1 254 8.3E-82 T 25-04-2016 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 1.5E-16 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 PANTHER PTHR30154 1 156 2.8E-47 T 25-04-2016 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 SUPERFAMILY SSF54909 68 150 9.79E-15 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 Gene3D G3DSA:1.10.10.10 8 58 2.4E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 SUPERFAMILY SSF46785 6 66 7.1E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.6E-9 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.6E-9 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.6E-9 T 25-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 SMART SM00344 7 116 1.2E-32 T 25-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 146 5.4E-16 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 PANTHER PTHR30154:SF28 1 156 2.8E-47 T 25-04-2016 SMD_RS18640 42a269e663739ddad8f9dc6046d5ca79 160 Gene3D G3DSA:3.30.70.920 60 156 3.7E-20 T 25-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SMD_RS10975 b58cd2e9d6b6824a784de786c3ba3a0a 218 PANTHER PTHR36307 68 218 6.8E-30 T 25-04-2016 SMD_RS10975 b58cd2e9d6b6824a784de786c3ba3a0a 218 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 81 216 2.2E-38 T 25-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SMD_RS10975 b58cd2e9d6b6824a784de786c3ba3a0a 218 SMART SM00858 93 155 1.7E-11 T 25-04-2016 IPR013974 SAF domain SMD_RS10975 b58cd2e9d6b6824a784de786c3ba3a0a 218 Pfam PF13144 Chaperone for flagella basal body P-ring formation 52 216 2.0E-40 T 25-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 4.4E-86 T 25-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 SUPERFAMILY SSF64484 16 945 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 SUPERFAMILY SSF64484 1134 1363 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 6.2E-78 T 25-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.512 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Gene3D G3DSA:2.40.50.100 1157 1209 3.6E-7 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376:SF32 570 944 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376:SF32 1177 1262 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376:SF32 1303 1407 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376:SF32 4 551 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376:SF32 964 1158 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 SMART SM00663 235 514 2.1E-183 T 25-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376 570 944 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376 1177 1262 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376 1303 1407 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376 4 551 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 PANTHER PTHR19376 964 1158 0.0 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 9.1E-19 T 25-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 3.0E-27 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 9.4E-8 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Gene3D G3DSA:2.40.40.20 349 376 4.5E-37 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Gene3D G3DSA:2.40.40.20 417 489 4.5E-37 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.239 T 25-04-2016 SMD_RS04140 b9d68e4e384a591533ca16d81924a4be 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 7.8E-29 T 25-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS10370 9b85f13150f0e512c4930b92735e05d1 408 Gene3D G3DSA:1.50.10.10 3 407 1.8E-132 T 25-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMD_RS10370 9b85f13150f0e512c4930b92735e05d1 408 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 34 399 7.7E-119 T 25-04-2016 SMD_RS10370 9b85f13150f0e512c4930b92735e05d1 408 SUPERFAMILY SSF48208 6 407 2.78E-119 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS10370 9b85f13150f0e512c4930b92735e05d1 408 PANTHER PTHR15108 1 408 3.8E-89 T 25-04-2016 SMD_RS15065 1b6313f577fe9a7551490b9e3e6c141d 177 Pfam PF05233 PHB accumulation regulatory domain 70 109 1.9E-18 T 25-04-2016 IPR007897 PHB accumulation regulatory SMD_RS15065 1b6313f577fe9a7551490b9e3e6c141d 177 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 8.8E-30 T 25-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal SMD_RS15065 1b6313f577fe9a7551490b9e3e6c141d 177 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 111 1.1E-53 T 25-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR SMD_RS18000 a463be471089451b5b524c508fcd297d 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 209 3.3E-69 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 Gene3D G3DSA:3.40.50.1360 3 137 5.5E-58 T 25-04-2016 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 Gene3D G3DSA:3.30.70.260 138 195 1.5E-28 T 25-04-2016 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 33.385 T 25-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 PANTHER PTHR11934:SF11 1 210 4.6E-129 T 25-04-2016 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 2.6E-58 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 SUPERFAMILY SSF75445 125 197 7.33E-23 T 25-04-2016 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 PANTHER PTHR11934 1 210 4.6E-129 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMD_RS18000 a463be471089451b5b524c508fcd297d 215 SUPERFAMILY SSF100950 2 145 8.94E-47 T 25-04-2016 SMD_RS04730 c6661904796ff51fe13446cdedc657b1 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 115 5.1E-44 T 25-04-2016 IPR021341 Protein of unknown function DUF2958 SMD_RS20255 8a2a0b9c8e1b4d8bac7f39afdf45e537 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 196 5.4E-28 T 25-04-2016 SMD_RS20255 8a2a0b9c8e1b4d8bac7f39afdf45e537 238 SUPERFAMILY SSF56784 13 209 9.74E-21 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20255 8a2a0b9c8e1b4d8bac7f39afdf45e537 238 Gene3D G3DSA:3.40.50.1000 100 231 3.3E-21 T 25-04-2016 IPR023214 HAD-like domain SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 Pfam PF04055 Radical SAM superfamily 119 238 1.8E-7 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 Gene3D G3DSA:3.20.20.70 110 317 1.7E-10 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 PIRSF PIRSF004911 6 338 5.7E-104 T 25-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 PANTHER PTHR30538:SF1 18 338 2.6E-116 T 25-04-2016 SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 SUPERFAMILY SSF102114 109 327 4.97E-19 T 25-04-2016 SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 PANTHER PTHR30538 18 338 2.6E-116 T 25-04-2016 SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 Pfam PF13394 4Fe-4S single cluster domain 118 187 8.0E-6 T 25-04-2016 SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 18 331 9.4E-92 T 25-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SMD_RS15025 fd47982b9c0dc30a8ecf3c8306c6f20d 338 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 18 337 1.4E-134 T 25-04-2016 IPR022462 Lysine-2,3-aminomutase-like SMD_RS10785 8481f74474a673d6a083899434222631 263 PANTHER PTHR30065 7 257 2.6E-73 T 25-04-2016 SMD_RS10785 8481f74474a673d6a083899434222631 263 PANTHER PTHR30065:SF1 7 257 2.6E-73 T 25-04-2016 SMD_RS10785 8481f74474a673d6a083899434222631 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 20 258 1.1E-58 T 25-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SMD_RS10785 8481f74474a673d6a083899434222631 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 1.1E-21 T 25-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMD_RS10785 8481f74474a673d6a083899434222631 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 1.1E-21 T 25-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMD_RS10785 8481f74474a673d6a083899434222631 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 1.1E-21 T 25-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMD_RS10785 8481f74474a673d6a083899434222631 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 86 105 1.1E-21 T 25-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMD_RS10785 8481f74474a673d6a083899434222631 263 Pfam PF01311 Bacterial export proteins, family 1 20 253 2.2E-58 T 25-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 Gene3D G3DSA:3.30.1060.10 58 214 5.7E-63 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 61 221 34.164 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 PANTHER PTHR10173 31 208 3.7E-73 T 25-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 Pfam PF01625 Peptide methionine sulfoxide reductase 64 215 5.7E-56 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 SUPERFAMILY SSF55068 59 225 5.1E-63 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 PANTHER PTHR10173:SF29 31 208 3.7E-73 T 25-04-2016 SMD_RS02780 7b3ad75d85a6118a183178d996c06259 245 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 64 212 1.9E-51 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMD_RS04710 437bc00d15b2e0cf89fad9ce64d2c8b3 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 1.3E-35 T 25-04-2016 IPR007948 Protein of unknown function DUF736 SMD_RS12350 27167c1b0a27fbd7dc13f0a1f49664d6 417 PANTHER PTHR30489 1 201 1.0E-69 T 25-04-2016 SMD_RS12350 27167c1b0a27fbd7dc13f0a1f49664d6 417 PANTHER PTHR30489 224 416 1.0E-69 T 25-04-2016 SMD_RS12350 27167c1b0a27fbd7dc13f0a1f49664d6 417 Pfam PF02687 FtsX-like permease family 290 407 2.6E-13 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS12350 27167c1b0a27fbd7dc13f0a1f49664d6 417 PANTHER PTHR30489:SF2 1 201 1.0E-69 T 25-04-2016 SMD_RS12350 27167c1b0a27fbd7dc13f0a1f49664d6 417 PANTHER PTHR30489:SF2 224 416 1.0E-69 T 25-04-2016 SMD_RS12350 27167c1b0a27fbd7dc13f0a1f49664d6 417 Pfam PF12704 MacB-like periplasmic core domain 18 211 6.3E-11 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS12125 2dcdd1fcde48e5b8987ddb8d94feefd4 127 Gene3D G3DSA:2.60.290.11 4 126 6.1E-54 T 25-04-2016 IPR009794 Protein of unknown function DUF1362 SMD_RS12125 2dcdd1fcde48e5b8987ddb8d94feefd4 127 PIRSF PIRSF008711 4 126 3.3E-57 T 25-04-2016 IPR009794 Protein of unknown function DUF1362 SMD_RS12125 2dcdd1fcde48e5b8987ddb8d94feefd4 127 Pfam PF07100 Anabaena sensory rhodopsin transducer 8 126 1.8E-55 T 25-04-2016 IPR009794 Protein of unknown function DUF1362 SMD_RS12125 2dcdd1fcde48e5b8987ddb8d94feefd4 127 SUPERFAMILY SSF89232 7 125 2.09E-46 T 25-04-2016 IPR009794 Protein of unknown function DUF1362 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 381 3.9E-47 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 6.2E-25 T 25-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 Gene3D G3DSA:1.10.540.10 4 122 2.6E-36 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 120 1.6E-28 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 PANTHER PTHR10909 5 388 1.7E-190 T 25-04-2016 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 Gene3D G3DSA:1.20.140.10 221 385 3.5E-69 T 25-04-2016 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 PANTHER PTHR10909:SF305 5 388 1.7E-190 T 25-04-2016 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 SUPERFAMILY SSF56645 6 244 6.28E-77 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 Gene3D G3DSA:2.40.110.10 125 220 5.2E-40 T 25-04-2016 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS01355 717797340cd4bd37ab7ad02821690d71 388 SUPERFAMILY SSF47203 229 383 3.87E-59 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS09445 6643d4f1f82acfb557311d44e433c169 85 SUPERFAMILY SSF54285 1 71 3.18E-14 T 25-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SMD_RS09445 6643d4f1f82acfb557311d44e433c169 85 Gene3D G3DSA:3.10.20.280 1 81 6.3E-22 T 25-04-2016 IPR005346 RnfH protein SMD_RS09445 6643d4f1f82acfb557311d44e433c169 85 PANTHER PTHR37483 1 82 3.2E-21 T 25-04-2016 SMD_RS09445 6643d4f1f82acfb557311d44e433c169 85 Pfam PF03658 RnfH family Ubiquitin 2 79 5.5E-18 T 25-04-2016 IPR005346 RnfH protein SMD_RS09445 6643d4f1f82acfb557311d44e433c169 85 Hamap MF_00460 Protein RnfH [rnfH]. 2 84 17.619 T 25-04-2016 IPR005346 RnfH protein SMD_RS09445 6643d4f1f82acfb557311d44e433c169 85 PANTHER PTHR37483:SF1 1 82 3.2E-21 T 25-04-2016 SMD_RS16980 b9ed4ad33f13274bb953ca6a77b1f9e0 235 Pfam PF05944 Phage small terminase subunit 39 167 3.2E-43 T 25-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 SMD_RS00765 266c300fdc4d263d91218ad8a94049b2 155 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 16 152 6.2E-42 T 25-04-2016 IPR012660 Thioesterase, putative SMD_RS00765 266c300fdc4d263d91218ad8a94049b2 155 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 20 152 1.3E-43 T 25-04-2016 IPR012660 Thioesterase, putative SMD_RS00765 266c300fdc4d263d91218ad8a94049b2 155 SUPERFAMILY SSF54637 14 151 3.13E-30 T 25-04-2016 IPR029069 HotDog domain SMD_RS00765 266c300fdc4d263d91218ad8a94049b2 155 Gene3D G3DSA:3.10.129.10 9 153 5.2E-44 T 25-04-2016 IPR029069 HotDog domain SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 Gene3D G3DSA:3.30.420.40 165 191 6.1E-35 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 Gene3D G3DSA:3.30.420.40 268 322 6.1E-35 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 Gene3D G3DSA:3.30.420.40 9 164 6.6E-46 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PANTHER PTHR19375 9 331 1.2E-182 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 SUPERFAMILY SSF53067 9 153 1.04E-37 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 Gene3D G3DSA:3.90.640.10 192 264 3.1E-29 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PANTHER PTHR19375:SF117 9 331 1.2E-182 T 25-04-2016 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 SMART SM00268 10 345 0.004 T 25-04-2016 IPR004000 Actin family SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 8.3E-62 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 8.3E-62 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 8.3E-62 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 8.3E-62 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 8.3E-62 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.7E-158 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-149 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMD_RS18880 799157e17f85cb28363a712ceb5f24ba 348 SUPERFAMILY SSF53067 155 340 4.92E-49 T 25-04-2016 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 SMART SM01390 3 97 2.3E-46 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 34.591 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 25-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 SMART SM00363 98 162 1.3E-15 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 SUPERFAMILY SSF55174 3 209 5.63E-65 T 25-04-2016 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.4E-30 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 209 2.8E-76 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 Gene3D G3DSA:3.10.290.10 104 193 1.8E-29 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 Gene3D G3DSA:1.10.1050.10 1 103 7.0E-42 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 PANTHER PTHR11831 1 209 1.2E-88 T 25-04-2016 IPR022801 Ribosomal protein S4/S9 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 PANTHER PTHR11831:SF4 1 209 1.2E-88 T 25-04-2016 SMD_RS04285 5eb2fd3165072850f41942594d5c702a 209 Pfam PF01479 S4 domain 99 145 6.7E-19 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 Gene3D G3DSA:3.40.640.10 28 205 7.1E-37 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 44 195 4.2E-34 T 25-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 Gene3D G3DSA:3.90.1150.10 290 399 9.8E-6 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 PANTHER PTHR11751:SF119 43 205 9.5E-19 T 25-04-2016 SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 PANTHER PTHR11751 43 205 9.5E-19 T 25-04-2016 SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 SUPERFAMILY SSF53383 28 209 2.15E-45 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS06585 da53851ff2682b780de728fe85e39eae 402 SUPERFAMILY SSF53383 262 399 2.15E-45 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS09285 278c28f76d13ee9ed6d00ddee59fe33b 204 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 44 203 31.175 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS09285 278c28f76d13ee9ed6d00ddee59fe33b 204 Gene3D G3DSA:3.90.80.10 40 203 6.5E-52 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS09285 278c28f76d13ee9ed6d00ddee59fe33b 204 SUPERFAMILY SSF50324 40 204 1.18E-54 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS09285 278c28f76d13ee9ed6d00ddee59fe33b 204 PANTHER PTHR10286 42 204 2.5E-55 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS09285 278c28f76d13ee9ed6d00ddee59fe33b 204 Pfam PF00719 Inorganic pyrophosphatase 49 203 4.9E-47 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS09285 278c28f76d13ee9ed6d00ddee59fe33b 204 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 94 100 - T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 161 173 - T 25-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 388 2.4E-62 T 25-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 72 96 - T 25-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 Pfam PF00854 POT family 84 332 9.7E-36 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 Pfam PF00854 POT family 407 529 3.6E-16 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 PANTHER PTHR11654:SF119 401 561 6.0E-110 T 25-04-2016 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 PANTHER PTHR11654:SF119 7 239 6.0E-110 T 25-04-2016 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 PANTHER PTHR11654:SF119 288 339 6.0E-110 T 25-04-2016 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 PANTHER PTHR11654 401 561 6.0E-110 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 PANTHER PTHR11654 7 239 6.0E-110 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 PANTHER PTHR11654 288 339 6.0E-110 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 SUPERFAMILY SSF103473 14 218 6.8E-18 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 SUPERFAMILY SSF103473 288 393 6.8E-18 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06080 d22f8d4d7b0d38bb93f8ceef099936f7 584 Gene3D G3DSA:1.20.1250.20 18 217 3.6E-16 T 25-04-2016 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 Gene3D G3DSA:3.40.190.10 173 259 6.7E-21 T 25-04-2016 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 SUPERFAMILY SSF46785 4 108 8.27E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05280 39dea44a53473fa343768c007b87554e 307 Gene3D G3DSA:3.40.190.10 83 172 1.8E-9 T 25-04-2016 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 SUPERFAMILY SSF53850 90 293 2.48E-45 T 25-04-2016 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 PANTHER PTHR30537:SF5 1 298 6.4E-103 T 25-04-2016 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 Gene3D G3DSA:1.10.10.10 3 82 2.1E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05280 39dea44a53473fa343768c007b87554e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.4E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 PANTHER PTHR30537 1 298 6.4E-103 T 25-04-2016 SMD_RS05280 39dea44a53473fa343768c007b87554e 307 Pfam PF03466 LysR substrate binding domain 89 292 1.0E-44 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS07480 d17c2e2aec06af026578ec733d6149a0 301 PANTHER PTHR21666 155 295 3.3E-41 T 25-04-2016 SMD_RS07480 d17c2e2aec06af026578ec733d6149a0 301 SUPERFAMILY SSF53955 169 295 3.64E-44 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS07480 d17c2e2aec06af026578ec733d6149a0 301 Gene3D G3DSA:1.10.530.10 167 295 1.4E-45 T 25-04-2016 SMD_RS07480 d17c2e2aec06af026578ec733d6149a0 301 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 193 221 - T 25-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SMD_RS07480 d17c2e2aec06af026578ec733d6149a0 301 Pfam PF01464 Transglycosylase SLT domain 177 272 1.2E-25 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 596 629 - T 25-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 Pfam PF07660 Secretin and TonB N terminus short domain 214 260 1.9E-9 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 Pfam PF00263 Bacterial type II and III secretion system protein 486 651 3.1E-49 T 25-04-2016 IPR004846 Type II/III secretion system GO:0009306 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 615 633 4.5E-17 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 506 4.5E-17 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 638 652 4.5E-17 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 372 382 4.5E-17 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 SMART SM00965 213 261 1.2E-10 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PANTHER PTHR30604 51 305 1.2E-119 T 25-04-2016 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PANTHER PTHR30604 324 458 1.2E-119 T 25-04-2016 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 PANTHER PTHR30604 479 656 1.2E-119 T 25-04-2016 SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 Pfam PF03958 Bacterial type II/III secretion system short domain 288 372 5.7E-15 T 25-04-2016 IPR005644 NolW-like SMD_RS17775 a8d323b15dfb797403e5c3ec3a80867c 656 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 188 650 4.7E-160 T 25-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 SMD_RS12545 6c1c14e4b1a436ec3794c4d187616266 583 SUPERFAMILY SSF56935 179 300 4.94E-6 T 25-04-2016 SMD_RS12545 6c1c14e4b1a436ec3794c4d187616266 583 SUPERFAMILY SSF56935 422 553 4.94E-6 T 25-04-2016 SMD_RS12545 6c1c14e4b1a436ec3794c4d187616266 583 SUPERFAMILY SSF56935 327 374 4.94E-6 T 25-04-2016 SMD_RS12545 6c1c14e4b1a436ec3794c4d187616266 583 Pfam PF16930 Putative porin 41 583 4.3E-211 T 25-04-2016 IPR032638 Putative bacterial porin SMD_RS03910 4b6d362f43cb180e1f31ff4cfd3d40c0 150 Pfam PF11304 Protein of unknown function (DUF3106) 40 138 1.4E-26 T 25-04-2016 IPR021455 Protein of unknown function DUF3106 SMD_RS16995 6a36dc3d1634b945893ac0bef673920b 117 Pfam PF16931 Putative phage holin 1 114 6.6E-36 T 25-04-2016 IPR032637 Putative phage holin-like SMD_RS15780 1d489431f780bd325634541ce84860fc 414 PANTHER PTHR30590:SF2 15 413 2.9E-120 T 25-04-2016 SMD_RS15780 1d489431f780bd325634541ce84860fc 414 PANTHER PTHR30590 15 413 2.9E-120 T 25-04-2016 SMD_RS15780 1d489431f780bd325634541ce84860fc 414 Pfam PF04235 Protein of unknown function (DUF418) 248 402 3.7E-37 T 25-04-2016 IPR007349 Domain of unknown function DUF418 SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.5E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 Gene3D G3DSA:3.40.190.10 178 263 2.1E-17 T 25-04-2016 SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 SUPERFAMILY SSF46785 3 87 2.04E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 PANTHER PTHR30537:SF25 1 312 1.3E-180 T 25-04-2016 SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 Gene3D G3DSA:1.10.10.10 2 86 3.6E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 SUPERFAMILY SSF53850 89 298 1.21E-39 T 25-04-2016 SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 Pfam PF03466 LysR substrate binding domain 88 295 1.4E-39 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 Gene3D G3DSA:3.40.190.10 93 177 3.7E-19 T 25-04-2016 SMD_RS13970 cac480d9743c81c8cdbf5804e4b739ed 330 PANTHER PTHR30537 1 312 1.3E-180 T 25-04-2016 SMD_RS15075 b308df07da116a4182e0bcb7e7b70636 309 PANTHER PTHR41913:SF1 3 306 4.1E-59 T 25-04-2016 SMD_RS15075 b308df07da116a4182e0bcb7e7b70636 309 PANTHER PTHR41913 3 306 4.1E-59 T 25-04-2016 SMD_RS15075 b308df07da116a4182e0bcb7e7b70636 309 Pfam PF07920 Protein of unknown function (DUF1684) 164 300 1.0E-41 T 25-04-2016 IPR012467 Protein of unknown function DUF1684 SMD_RS02695 87599abb033c1f5c48b6e380c4ab1e05 354 PANTHER PTHR18895 90 341 3.2E-43 T 25-04-2016 SMD_RS02695 87599abb033c1f5c48b6e380c4ab1e05 354 SUPERFAMILY SSF53335 172 345 3.96E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02695 87599abb033c1f5c48b6e380c4ab1e05 354 Pfam PF05175 Methyltransferase small domain 178 346 9.9E-49 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMD_RS02695 87599abb033c1f5c48b6e380c4ab1e05 354 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 278 284 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMD_RS02695 87599abb033c1f5c48b6e380c4ab1e05 354 Gene3D G3DSA:3.40.50.150 175 350 3.3E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS02695 87599abb033c1f5c48b6e380c4ab1e05 354 PANTHER PTHR18895:SF70 90 341 3.2E-43 T 25-04-2016 SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 SMART SM00267 283 456 1.1E-62 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 456 1.5E-52 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 SUPERFAMILY SSF46458 35 155 2.49E-17 T 25-04-2016 IPR009050 Globin-like SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 SUPERFAMILY SSF55073 300 457 9.42E-49 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 Pfam PF11563 Protoglobin 29 165 7.8E-12 T 25-04-2016 SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 452 1.6E-45 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 Gene3D G3DSA:1.10.490.10 31 154 4.5E-19 T 25-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 PANTHER PTHR10799 328 463 5.5E-24 T 25-04-2016 SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 PANTHER PTHR10799 148 158 5.5E-24 T 25-04-2016 SMD_RS06630 79b26513b450ad12eaed0e48a4185ac3 471 Gene3D G3DSA:3.30.70.270 298 461 9.3E-55 T 25-04-2016 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 PANTHER PTHR11075:SF6 11 306 1.1E-142 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 Pfam PF03462 PCRF domain 10 154 6.3E-48 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 9 297 1.9E-140 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 Gene3D G3DSA:3.30.160.20 162 240 9.0E-38 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 Pfam PF00472 RF-1 domain 163 271 4.4E-40 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 179 195 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 PANTHER PTHR11075 11 306 1.1E-142 T 25-04-2016 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 Gene3D G3DSA:1.20.58.410 7 50 9.2E-6 T 25-04-2016 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 SUPERFAMILY SSF75620 7 297 4.19E-121 T 25-04-2016 SMD_RS10570 f5a45f47b00cc95a52e9710d34a2c85a 308 SMART SM00937 16 129 5.2E-55 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMD_RS19055 60cab2f1ef740816150a8f2569525dc8 370 Gene3D G3DSA:3.40.50.1100 47 142 1.5E-22 T 25-04-2016 SMD_RS19055 60cab2f1ef740816150a8f2569525dc8 370 SUPERFAMILY SSF53686 3 338 1.19E-63 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS19055 60cab2f1ef740816150a8f2569525dc8 370 PANTHER PTHR10314 1 344 1.9E-189 T 25-04-2016 SMD_RS19055 60cab2f1ef740816150a8f2569525dc8 370 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 321 5.1E-43 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS19055 60cab2f1ef740816150a8f2569525dc8 370 Gene3D G3DSA:3.40.50.1100 143 339 8.9E-33 T 25-04-2016 SMD_RS19055 60cab2f1ef740816150a8f2569525dc8 370 PANTHER PTHR10314:SF126 1 344 1.9E-189 T 25-04-2016 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 212 1.8E-74 T 25-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 SUPERFAMILY SSF51569 7 213 1.19E-61 T 25-04-2016 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 PANTHER PTHR30246:SF0 1 219 9.8E-99 T 25-04-2016 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 25-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 Gene3D G3DSA:3.20.20.70 7 217 2.6E-68 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 PANTHER PTHR30246 1 219 9.8E-99 T 25-04-2016 SMD_RS09115 fcf4473fe14e2e970074ea6581224ef7 219 Pfam PF01081 KDPG and KHG aldolase 12 203 1.5E-60 T 25-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SMD_RS05345 e3cd886df35d67374e45d4274fdf457b 327 Pfam PF00248 Aldo/keto reductase family 16 307 5.2E-74 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS05345 e3cd886df35d67374e45d4274fdf457b 327 SUPERFAMILY SSF51430 1 309 4.71E-101 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS05345 e3cd886df35d67374e45d4274fdf457b 327 Gene3D G3DSA:3.20.20.100 1 320 8.5E-114 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS05345 e3cd886df35d67374e45d4274fdf457b 327 PANTHER PTHR11732 1 322 2.0E-183 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS05345 e3cd886df35d67374e45d4274fdf457b 327 PANTHER PTHR11732:SF269 1 322 2.0E-183 T 25-04-2016 SMD_RS14815 351b80f62a1f10f39245ec515217fca0 62 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 2 44 1.3E-6 T 25-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SMD_RS14815 351b80f62a1f10f39245ec515217fca0 62 Pfam PF04995 Heme exporter protein D (CcmD) 1 44 3.8E-10 T 25-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SMD_RS06745 372e1a0e96be2ef2e41d7e144d3e9f42 59 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 2.6E-12 T 25-04-2016 IPR030826 30S ribosomal protein GO:0005840 SMD_RS06745 372e1a0e96be2ef2e41d7e144d3e9f42 59 Pfam PF17067 Ribosomal protein S31e 2 38 7.3E-9 T 25-04-2016 SMD_RS06625 25b848290008d27795dacc40fb01ae38 420 PANTHER PTHR23501 22 399 4.0E-96 T 25-04-2016 SMD_RS06625 25b848290008d27795dacc40fb01ae38 420 SUPERFAMILY SSF103473 25 402 4.71E-44 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06625 25b848290008d27795dacc40fb01ae38 420 Pfam PF07690 Major Facilitator Superfamily 37 288 1.7E-22 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS06625 25b848290008d27795dacc40fb01ae38 420 Gene3D G3DSA:1.20.1250.20 34 206 4.6E-19 T 25-04-2016 SMD_RS06625 25b848290008d27795dacc40fb01ae38 420 Gene3D G3DSA:1.20.1250.20 237 400 9.0E-11 T 25-04-2016 SMD_RS06625 25b848290008d27795dacc40fb01ae38 420 PANTHER PTHR23501:SF79 22 399 4.0E-96 T 25-04-2016 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 PANTHER PTHR11079:SF70 10 71 7.6E-18 T 25-04-2016 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 Pfam PF01479 S4 domain 11 56 1.1E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 SUPERFAMILY SSF55174 10 102 3.14E-25 T 25-04-2016 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 PIRSF PIRSF016821 8 134 1.2E-35 T 25-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 Gene3D G3DSA:3.10.290.10 10 105 7.7E-33 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 PANTHER PTHR11079 10 71 7.6E-18 T 25-04-2016 SMD_RS06465 e191598bdaef800cac11df1d5de47a07 135 SMART SM00363 11 72 6.6E-7 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 Gene3D G3DSA:3.40.50.300 1 241 1.7E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 SMART SM00382 26 230 5.0E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 PANTHER PTHR24220:SF85 3 251 2.9E-128 T 25-04-2016 SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 SUPERFAMILY SSF52540 2 231 1.39E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 243 3.4E-109 T 25-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 PANTHER PTHR24220 3 251 2.9E-128 T 25-04-2016 SMD_RS05660 cb8330b9ae148799bbaa399fcf891728 254 Pfam PF00005 ABC transporter 17 172 5.0E-22 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 64 1.1E-26 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 156 1.7E-35 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 SUPERFAMILY SSF54364 2 66 9.81E-26 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 158 5.4E-62 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 158 27.809 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 25-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 Gene3D G3DSA:3.10.20.80 2 66 8.3E-31 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 SUPERFAMILY SSF55200 71 158 1.7E-30 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 PANTHER PTHR10938 1 158 1.8E-60 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMD_RS15335 811deffc1610f3c73f1bdb843a993139 159 Gene3D G3DSA:3.30.110.10 67 158 5.7E-37 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PANTHER PTHR32305 1160 1425 9.8E-106 T 25-04-2016 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PANTHER PTHR32305 703 1135 9.8E-106 T 25-04-2016 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PANTHER PTHR32305 327 530 9.8E-106 T 25-04-2016 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PRINTS PR00394 RHS protein signature 1384 1403 6.4E-8 T 25-04-2016 IPR001826 RHS protein SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PRINTS PR00394 RHS protein signature 1361 1381 6.4E-8 T 25-04-2016 IPR001826 RHS protein SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1338 1417 3.4E-15 T 25-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PANTHER PTHR32305:SF6 1160 1425 9.8E-106 T 25-04-2016 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PANTHER PTHR32305:SF6 703 1135 9.8E-106 T 25-04-2016 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 PANTHER PTHR32305:SF6 327 530 9.8E-106 T 25-04-2016 SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 1146 1184 3.2E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 756 793 4.8E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 690 723 9.0E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 890 924 8.8E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 709 742 1.5E-8 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 933 966 3.9E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 824 858 1.7E-5 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 Pfam PF05593 RHS Repeat 845 882 8.2E-6 T 25-04-2016 IPR031325 RHS repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 760 796 5.6E-5 T 25-04-2016 IPR006530 YD repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 890 931 6.7E-7 T 25-04-2016 IPR006530 YD repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 825 863 1.2E-6 T 25-04-2016 IPR006530 YD repeat SMD_RS20770 24825ebc57e4c419ceccaf96166b9005 1565 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 709 744 4.4E-6 T 25-04-2016 IPR006530 YD repeat SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 SUPERFAMILY SSF55120 8 222 1.01E-69 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 PANTHER PTHR13767:SF2 1 300 7.7E-103 T 25-04-2016 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 239 3.5E-18 T 25-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 300 17.326 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 Gene3D G3DSA:2.30.130.10 244 299 6.9E-12 T 25-04-2016 IPR015947 PUA-like domain SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 298 1.2E-8 T 25-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 179 7.6E-49 T 25-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 PANTHER PTHR13767 1 300 7.7E-103 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 2.6E-66 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS15380 e7d3ed41516b062cd6be89389c003397 302 SUPERFAMILY SSF88697 244 301 4.22E-6 T 25-04-2016 IPR015947 PUA-like domain SMD_RS17640 5425fc1e86c9706119aa782a196b4007 199 SMART SM00506 2 137 2.7E-50 T 25-04-2016 IPR002589 Macro domain SMD_RS17640 5425fc1e86c9706119aa782a196b4007 199 SUPERFAMILY SSF52949 1 171 1.68E-61 T 25-04-2016 SMD_RS17640 5425fc1e86c9706119aa782a196b4007 199 Gene3D G3DSA:3.40.220.10 1 173 2.2E-67 T 25-04-2016 SMD_RS17640 5425fc1e86c9706119aa782a196b4007 199 Pfam PF01661 Macro domain 19 137 2.2E-41 T 25-04-2016 IPR002589 Macro domain SMD_RS17640 5425fc1e86c9706119aa782a196b4007 199 PANTHER PTHR11106 2 172 1.2E-83 T 25-04-2016 SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 Gene3D G3DSA:3.90.1200.10 267 360 1.3E-8 T 25-04-2016 SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 SUPERFAMILY SSF56112 205 436 4.08E-25 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 SUPERFAMILY SSF56112 101 164 4.08E-25 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 PANTHER PTHR10566:SF10 9 452 1.1E-153 T 25-04-2016 SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 12 446 2.0E-150 T 25-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 Pfam PF03109 ABC1 family 119 237 1.5E-33 T 25-04-2016 IPR004147 UbiB domain SMD_RS08870 cd6322e6a63eeb56baf35602d4ba6f0d 560 PANTHER PTHR10566 9 452 1.1E-153 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 SUPERFAMILY SSF53474 532 776 8.72E-59 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 PANTHER PTHR11731 102 147 4.8E-203 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 PANTHER PTHR11731 237 788 4.8E-203 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 PANTHER PTHR11731:SF145 102 147 4.8E-203 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 PANTHER PTHR11731:SF145 237 788 4.8E-203 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 342 502 1.5E-16 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 Pfam PF00326 Prolyl oligopeptidase family 594 787 1.3E-42 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 SUPERFAMILY SSF82171 96 162 5.62E-35 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 SUPERFAMILY SSF82171 234 253 5.62E-35 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 SUPERFAMILY SSF82171 286 308 5.62E-35 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 SUPERFAMILY SSF82171 339 533 5.62E-35 T 25-04-2016 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 Gene3D G3DSA:3.40.50.1820 533 785 4.7E-67 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 Gene3D G3DSA:2.140.10.30 66 151 4.4E-34 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS21355 3b2a2cb3113b9b9c0a1c76601f8dbb38 788 Gene3D G3DSA:2.140.10.30 234 520 4.4E-34 T 25-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SMD_RS21470 505fc8664d3f0a9382a7c500ff16f9eb 129 Gene3D G3DSA:3.30.1330.40 11 129 1.1E-40 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS21470 505fc8664d3f0a9382a7c500ff16f9eb 129 Pfam PF01042 Endoribonuclease L-PSP 13 127 5.2E-26 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS21470 505fc8664d3f0a9382a7c500ff16f9eb 129 PANTHER PTHR11803:SF6 12 129 6.2E-68 T 25-04-2016 SMD_RS21470 505fc8664d3f0a9382a7c500ff16f9eb 129 SUPERFAMILY SSF55298 8 129 7.38E-35 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMD_RS21470 505fc8664d3f0a9382a7c500ff16f9eb 129 PANTHER PTHR11803 12 129 6.2E-68 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMD_RS11910 c67aff5a2a19e825b7148cbd100f8f89 484 Pfam PF03572 Peptidase family S41 239 304 6.2E-5 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS11910 c67aff5a2a19e825b7148cbd100f8f89 484 SUPERFAMILY SSF52096 60 125 2.82E-9 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS11910 c67aff5a2a19e825b7148cbd100f8f89 484 SUPERFAMILY SSF52096 229 322 2.82E-9 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS11910 c67aff5a2a19e825b7148cbd100f8f89 484 SUPERFAMILY SSF52096 384 453 2.82E-9 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS11910 c67aff5a2a19e825b7148cbd100f8f89 484 Gene3D G3DSA:3.90.226.10 232 322 1.7E-6 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS11910 c67aff5a2a19e825b7148cbd100f8f89 484 Gene3D G3DSA:3.90.226.10 382 421 1.7E-6 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS10060 49aebfde9c2aa2ca8530abcc2fdf215e 242 Pfam PF08445 FR47-like protein 161 221 3.1E-6 T 25-04-2016 IPR013653 FR47-like GO:0016747 SMD_RS10060 49aebfde9c2aa2ca8530abcc2fdf215e 242 Gene3D G3DSA:3.40.630.30 113 222 8.5E-13 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10060 49aebfde9c2aa2ca8530abcc2fdf215e 242 SUPERFAMILY SSF55729 68 221 6.88E-15 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 PANTHER PTHR11564:SF16 132 434 1.1E-129 T 25-04-2016 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 Gene3D G3DSA:3.40.50.300 244 432 4.1E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 Pfam PF02881 SRP54-type protein, helical bundle domain 149 213 2.4E-11 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 SMART SM00963 138 217 6.8E-19 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 406 419 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 160 433 62.34 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 SUPERFAMILY SSF52540 183 431 3.1E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 SMART SM00382 231 409 3.5E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 Pfam PF00448 SRP54-type protein, GTPase domain 232 432 8.0E-72 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 SMART SM00962 232 433 3.2E-110 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 PANTHER PTHR11564 132 434 1.1E-129 T 25-04-2016 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 160 432 1.3E-100 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SMD_RS09205 2516136aa9fa1e43fa667e5ec15168d1 438 Gene3D G3DSA:1.20.120.140 162 243 4.8E-28 T 25-04-2016 SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 SUPERFAMILY SSF52518 3 178 1.7E-49 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 2.0E-51 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 321 2.1E-27 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 SUPERFAMILY SSF52467 153 331 1.03E-36 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 523 6.2E-38 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 PANTHER PTHR18968 3 541 4.6E-263 T 25-04-2016 SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 SUPERFAMILY SSF52518 354 535 3.75E-56 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 Gene3D G3DSA:3.40.50.1220 180 327 8.4E-35 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 Gene3D G3DSA:3.40.50.970 3 176 1.1E-63 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 Gene3D G3DSA:3.40.50.970 347 532 5.0E-55 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS10585 52c3d1d7d1a76ae5564cf2a2e336e99e 546 PANTHER PTHR18968:SF129 3 541 4.6E-263 T 25-04-2016 SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 PANTHER PTHR33991 2 239 2.8E-45 T 25-04-2016 SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 154 8.0E-19 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 Pfam PF11967 Recombination protein O N terminal 2 78 5.7E-18 T 25-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 Pfam PF02565 Recombination protein O C terminal 85 230 1.6E-15 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 Hamap MF_00201 DNA repair protein RecO [recO]. 2 235 19.374 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 Gene3D G3DSA:2.40.50.140 1 83 2.8E-7 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS16215 792acf05072f8c16f8f4eca94f94395f 239 SUPERFAMILY SSF50249 1 78 3.77E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 Gene3D G3DSA:3.40.190.10 181 264 3.0E-18 T 25-04-2016 SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 PANTHER PTHR30537:SF28 1 294 4.1E-127 T 25-04-2016 SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 SUPERFAMILY SSF46785 5 89 3.61E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 Pfam PF03466 LysR substrate binding domain 90 294 1.4E-40 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 SUPERFAMILY SSF53850 92 294 2.79E-41 T 25-04-2016 SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 Gene3D G3DSA:3.40.190.10 94 180 1.0E-18 T 25-04-2016 SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.7E-20 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 Gene3D G3DSA:1.10.10.10 5 89 2.0E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18580 5c44296761a1a56f333bd1eb0821c633 294 PANTHER PTHR30537 1 294 4.1E-127 T 25-04-2016 SMD_RS06535 68d108db967e1f69a9d7ffcced5bf6c1 466 SUPERFAMILY SSF56954 7 449 7.59E-66 T 25-04-2016 SMD_RS06535 68d108db967e1f69a9d7ffcced5bf6c1 466 PANTHER PTHR30026 1 464 3.5E-67 T 25-04-2016 SMD_RS06535 68d108db967e1f69a9d7ffcced5bf6c1 466 Pfam PF02321 Outer membrane efflux protein 268 447 3.4E-27 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS06535 68d108db967e1f69a9d7ffcced5bf6c1 466 Pfam PF02321 Outer membrane efflux protein 41 243 1.2E-15 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS06535 68d108db967e1f69a9d7ffcced5bf6c1 466 PANTHER PTHR30026:SF5 1 464 3.5E-67 T 25-04-2016 SMD_RS06535 68d108db967e1f69a9d7ffcced5bf6c1 466 Gene3D G3DSA:1.20.1600.10 28 448 9.5E-51 T 25-04-2016 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 Pfam PF08281 Sigma-70, region 4 134 185 1.9E-18 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 PANTHER PTHR30173 1 191 4.0E-52 T 25-04-2016 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 188 2.2E-32 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 Gene3D G3DSA:1.10.10.10 127 192 6.7E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 Pfam PF04542 Sigma-70 region 2 29 96 2.8E-18 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 SUPERFAMILY SSF88659 127 188 1.74E-17 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 PANTHER PTHR30173:SF1 1 191 4.0E-52 T 25-04-2016 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 9.6E-104 T 25-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 SUPERFAMILY SSF88946 10 110 1.04E-29 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS16255 525e7af39ccd63ec0ab34c3562c7538c 206 Gene3D G3DSA:1.10.1740.10 8 112 3.9E-34 T 25-04-2016 SMD_RS13440 91c08a1ebe4689720c4729a19ee04245 233 SUPERFAMILY SSF52317 21 226 7.8E-42 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS13440 91c08a1ebe4689720c4729a19ee04245 233 PANTHER PTHR11922 42 205 2.3E-43 T 25-04-2016 SMD_RS13440 91c08a1ebe4689720c4729a19ee04245 233 PANTHER PTHR11922:SF11 42 205 2.3E-43 T 25-04-2016 SMD_RS13440 91c08a1ebe4689720c4729a19ee04245 233 Pfam PF00117 Glutamine amidotransferase class-I 28 181 1.5E-16 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS13440 91c08a1ebe4689720c4729a19ee04245 233 Gene3D G3DSA:3.40.50.880 2 225 3.1E-50 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS20425 e7f1592ac32dfda5d104394e60f69443 215 SUPERFAMILY SSF51735 5 207 1.63E-37 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20425 e7f1592ac32dfda5d104394e60f69443 215 Gene3D G3DSA:3.40.50.720 5 210 4.2E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20425 e7f1592ac32dfda5d104394e60f69443 215 PANTHER PTHR14097 5 201 1.7E-60 T 25-04-2016 SMD_RS02125 83cf15b729607d1572b297512a7f86b9 423 PANTHER PTHR30414:SF0 1 421 9.3E-146 T 25-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 SMD_RS02125 83cf15b729607d1572b297512a7f86b9 423 Gene3D G3DSA:2.30.30.60 207 257 4.2E-10 T 25-04-2016 SMD_RS02125 83cf15b729607d1572b297512a7f86b9 423 PANTHER PTHR30414 1 421 9.3E-146 T 25-04-2016 SMD_RS02125 83cf15b729607d1572b297512a7f86b9 423 SUPERFAMILY SSF50182 190 257 1.14E-10 T 25-04-2016 IPR010920 LSM domain SMD_RS02125 83cf15b729607d1572b297512a7f86b9 423 Pfam PF00924 Mechanosensitive ion channel 148 402 1.3E-46 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 Gene3D G3DSA:1.10.10.250 73 141 9.6E-30 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 PANTHER PTHR11661 1 142 6.2E-73 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 SUPERFAMILY SSF54747 3 72 5.63E-30 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 25-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.1E-23 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 SMART SM00649 9 141 3.8E-82 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.5E-64 T 25-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 2.0E-14 T 25-04-2016 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 Gene3D G3DSA:3.30.1550.10 2 72 1.8E-37 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.924 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMD_RS04115 53ec6f4257bf16ff203df2800f928d7f 142 SUPERFAMILY SSF46906 68 141 3.01E-24 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMD_RS00300 4b6ae453628aa97f19d0d886ab41b45b 292 Gene3D G3DSA:3.40.50.1820 29 270 1.8E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS00300 4b6ae453628aa97f19d0d886ab41b45b 292 SUPERFAMILY SSF53474 31 226 5.52E-13 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06740 21d9e061f9047694912fa7c75a4bdae1 137 Pfam PF03203 MerC mercury resistance protein 12 124 1.9E-26 T 25-04-2016 IPR004891 MerC mercury resistance protein SMD_RS11600 446d263270da982163e60875315c3d01 107 PANTHER PTHR36569:SF2 1 69 1.1E-32 T 25-04-2016 SMD_RS11600 446d263270da982163e60875315c3d01 107 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 14 35 1.4E-8 T 25-04-2016 IPR019626 Stress-induced protein, KGG, repeat SMD_RS11600 446d263270da982163e60875315c3d01 107 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 39 60 1.4E-5 T 25-04-2016 IPR019626 Stress-induced protein, KGG, repeat SMD_RS11600 446d263270da982163e60875315c3d01 107 PANTHER PTHR36569 1 69 1.1E-32 T 25-04-2016 SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 SUPERFAMILY SSF56436 352 627 2.24E-63 T 25-04-2016 IPR016187 C-type lectin fold SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 Pfam PF03781 Sulfatase-modifying factor enzyme 1 353 626 5.1E-67 T 25-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 PANTHER PTHR23150 34 40 8.7E-81 T 25-04-2016 SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 PANTHER PTHR23150 293 628 8.7E-81 T 25-04-2016 SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 PANTHER PTHR23150:SF19 34 40 8.7E-81 T 25-04-2016 SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 PANTHER PTHR23150:SF19 293 628 8.7E-81 T 25-04-2016 SMD_RS15115 96cdff2f915ee348e5d39a8402722435 628 Gene3D G3DSA:3.90.1580.10 348 627 2.7E-66 T 25-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMD_RS05545 2648453b43d94e4e11d9e6bff7bdc70f 341 PANTHER PTHR33540:SF1 17 330 3.6E-122 T 25-04-2016 SMD_RS05545 2648453b43d94e4e11d9e6bff7bdc70f 341 PANTHER PTHR33540 17 330 3.6E-122 T 25-04-2016 SMD_RS05545 2648453b43d94e4e11d9e6bff7bdc70f 341 Gene3D G3DSA:3.90.1200.10 101 330 2.5E-58 T 25-04-2016 SMD_RS05545 2648453b43d94e4e11d9e6bff7bdc70f 341 Gene3D G3DSA:3.30.200.20 9 97 9.4E-22 T 25-04-2016 SMD_RS05545 2648453b43d94e4e11d9e6bff7bdc70f 341 Pfam PF01636 Phosphotransferase enzyme family 30 251 1.2E-23 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase SMD_RS05545 2648453b43d94e4e11d9e6bff7bdc70f 341 SUPERFAMILY SSF56112 21 317 2.48E-37 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS10155 8674713c9b5ca341eb80f23dd36c06ae 119 Pfam PF00072 Response regulator receiver domain 8 115 6.3E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10155 8674713c9b5ca341eb80f23dd36c06ae 119 PANTHER PTHR26402 6 118 4.1E-20 T 25-04-2016 SMD_RS10155 8674713c9b5ca341eb80f23dd36c06ae 119 SMART SM00448 6 116 3.3E-17 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10155 8674713c9b5ca341eb80f23dd36c06ae 119 Gene3D G3DSA:3.40.50.2300 4 117 1.3E-26 T 25-04-2016 SMD_RS10155 8674713c9b5ca341eb80f23dd36c06ae 119 SUPERFAMILY SSF52172 5 117 2.99E-23 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 SUPERFAMILY SSF56219 7 261 7.85E-74 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 7 261 3.9E-67 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 PANTHER PTHR22748 6 262 5.4E-150 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 33 42 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 10 254 5.7E-21 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 7 260 1.2E-67 T 25-04-2016 SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 Gene3D G3DSA:3.60.10.10 6 262 1.4E-75 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS12110 d3cfa6cc81a92d6d54d6a7086b57ca7e 264 PANTHER PTHR22748:SF9 6 262 5.4E-150 T 25-04-2016 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.377 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 PANTHER PTHR10772 1 94 2.5E-38 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 7.7E-32 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 25-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 PRINTS PR00297 10kDa chaperonin signature 81 94 1.1E-32 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-32 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-32 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-32 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 Gene3D G3DSA:2.30.33.40 2 94 3.0E-34 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 SMART SM00883 2 94 1.1E-51 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMD_RS19820 75b47b00bccbe320b69bc22c120c4fe3 95 SUPERFAMILY SSF50129 1 94 3.7E-32 T 25-04-2016 IPR011032 GroES-like SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 Pfam PF13377 Periplasmic binding protein-like domain 173 339 3.6E-37 T 25-04-2016 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 PANTHER PTHR30146 2 348 1.4E-231 T 25-04-2016 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 SMART SM00354 3 73 6.4E-27 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 Gene3D G3DSA:1.10.260.40 4 55 1.5E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 Gene3D G3DSA:3.40.50.2300 56 174 8.9E-23 T 25-04-2016 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 5.0E-19 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 Gene3D G3DSA:3.40.50.2300 175 340 2.1E-55 T 25-04-2016 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.6E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.6E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 PANTHER PTHR30146:SF35 2 348 1.4E-231 T 25-04-2016 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 SUPERFAMILY SSF47413 2 61 9.38E-18 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS18725 7ba3bfc269d671f0e60cbb5b71a4b63d 355 SUPERFAMILY SSF53822 64 341 3.62E-64 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 SUPERFAMILY SSF51905 270 378 2.24E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 SUPERFAMILY SSF51905 6 168 2.24E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 Pfam PF01494 FAD binding domain 6 340 4.7E-25 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 PANTHER PTHR13789 5 422 3.3E-122 T 25-04-2016 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 PANTHER PTHR13789:SF202 5 422 3.3E-122 T 25-04-2016 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 2.4E-16 T 25-04-2016 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 2.4E-16 T 25-04-2016 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.4E-16 T 25-04-2016 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 2.4E-16 T 25-04-2016 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 Gene3D G3DSA:3.50.50.60 4 175 6.4E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS16170 981eccf7314eb3024a1fec9b71c9b2dd 422 Gene3D G3DSA:3.50.50.60 271 353 6.4E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 4.1E-22 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 SUPERFAMILY SSF46894 128 222 1.07E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 SUPERFAMILY SSF52172 4 163 8.68E-42 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 Gene3D G3DSA:3.40.50.2300 3 124 4.2E-40 T 25-04-2016 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 PANTHER PTHR26402:SF292 5 223 4.1E-78 T 25-04-2016 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 SMART SM00862 147 222 2.0E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 PANTHER PTHR26402 5 223 4.1E-78 T 25-04-2016 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 SMART SM00448 5 115 1.9E-42 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 Gene3D G3DSA:1.10.10.10 125 223 3.9E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04780 ab5ee6bf4a1cee7e6db0515a2ccd9799 229 Pfam PF00072 Response regulator receiver domain 7 115 2.2E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 SUPERFAMILY SSF111369 132 322 6.54E-12 T 25-04-2016 SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 Gene3D G3DSA:2.40.50.100 206 242 5.5E-10 T 25-04-2016 SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 Gene3D G3DSA:2.40.50.100 130 163 5.5E-10 T 25-04-2016 SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 391 7.0E-36 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 PANTHER PTHR30097:SF3 50 409 8.5E-64 T 25-04-2016 SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 114 317 6.5E-54 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS11185 4f3b7bfc94cc41ad3243e44a42914a89 498 PANTHER PTHR30097 50 409 8.5E-64 T 25-04-2016 SMD_RS06840 a6e58e2b5cd08a549c03cb4e029c24d8 520 Gene3D G3DSA:3.40.710.10 9 378 2.9E-84 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS06840 a6e58e2b5cd08a549c03cb4e029c24d8 520 PANTHER PTHR22935 24 421 3.7E-117 T 25-04-2016 SMD_RS06840 a6e58e2b5cd08a549c03cb4e029c24d8 520 Pfam PF11954 Domain of unknown function (DUF3471) 411 516 1.4E-33 T 25-04-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal SMD_RS06840 a6e58e2b5cd08a549c03cb4e029c24d8 520 SUPERFAMILY SSF56601 25 361 3.98E-84 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS06840 a6e58e2b5cd08a549c03cb4e029c24d8 520 PANTHER PTHR22935:SF68 24 421 3.7E-117 T 25-04-2016 SMD_RS06840 a6e58e2b5cd08a549c03cb4e029c24d8 520 Pfam PF00144 Beta-lactamase 29 365 1.1E-69 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS21225 9548842100ccdbfe745fe219029c71e2 86 Hamap MF_01866 Protein YcgL [ycgL]. 1 85 22.618 T 25-04-2016 IPR027354 YcgL domain SMD_RS21225 9548842100ccdbfe745fe219029c71e2 86 PANTHER PTHR38109 2 86 7.0E-27 T 25-04-2016 SMD_RS21225 9548842100ccdbfe745fe219029c71e2 86 SUPERFAMILY SSF160191 1 85 1.44E-28 T 25-04-2016 SMD_RS21225 9548842100ccdbfe745fe219029c71e2 86 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 74 3.0E-16 T 25-04-2016 IPR027354 YcgL domain SMD_RS21225 9548842100ccdbfe745fe219029c71e2 86 Pfam PF05166 YcgL domain 4 75 3.2E-27 T 25-04-2016 IPR027354 YcgL domain SMD_RS20630 95c06f5635111cd2d4088f1a2ed9515d 226 SUPERFAMILY SSF52833 44 199 1.72E-42 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS20630 95c06f5635111cd2d4088f1a2ed9515d 226 PANTHER PTHR12151:SF0 44 201 6.7E-45 T 25-04-2016 SMD_RS20630 95c06f5635111cd2d4088f1a2ed9515d 226 Gene3D G3DSA:3.40.30.10 16 199 3.0E-50 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS20630 95c06f5635111cd2d4088f1a2ed9515d 226 PANTHER PTHR12151 44 201 6.7E-45 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC SMD_RS20630 95c06f5635111cd2d4088f1a2ed9515d 226 Pfam PF02630 SCO1/SenC 40 178 3.1E-30 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 PANTHER PTHR12358 4 308 1.2E-53 T 25-04-2016 SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 SUPERFAMILY SSF111331 3 304 9.59E-66 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 8 301 2.7E-58 T 25-04-2016 IPR005218 Diacylglycerol/lipid kinase SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 SMART SM00046 5 130 1.1E-14 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 308 49.486 T 25-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 Gene3D G3DSA:3.40.50.10330 46 79 3.1E-4 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 130 7.4E-27 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMD_RS20285 aed3b1c6ef7355588ef138d8ad6f71ec 309 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 6 307 1.8E-129 T 25-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 PANTHER PTHR30055:SF47 7 188 1.2E-31 T 25-04-2016 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 PANTHER PTHR30055 7 188 1.2E-31 T 25-04-2016 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.6E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.6E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 SUPERFAMILY SSF46689 5 83 2.21E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 9.7E-14 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 Gene3D G3DSA:1.10.357.10 5 184 1.0E-32 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS11520 50bca78c859c54ef698c4c4af0b76438 189 SUPERFAMILY SSF48498 78 184 1.46E-22 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS00560 edaf972db41a1e25c1d1d4e686759181 235 Pfam PF13709 Domain of unknown function (DUF4159) 36 233 1.2E-53 T 25-04-2016 IPR025297 Domain of unknown function DUF4159 SMD_RS01835 ee20ad56a4a080c67e9679212c838414 157 Gene3D G3DSA:2.70.40.10 12 156 6.7E-50 T 25-04-2016 IPR029054 dUTPase-like SMD_RS01835 ee20ad56a4a080c67e9679212c838414 157 Pfam PF00692 dUTPase 22 155 3.2E-36 T 25-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SMD_RS01835 ee20ad56a4a080c67e9679212c838414 157 PANTHER PTHR11241 12 156 1.2E-49 T 25-04-2016 SMD_RS01835 ee20ad56a4a080c67e9679212c838414 157 TIGRFAM TIGR00576 dut: dUTP diphosphatase 18 155 5.3E-46 T 25-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SMD_RS01835 ee20ad56a4a080c67e9679212c838414 157 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 12 156 33.002 T 25-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SMD_RS01835 ee20ad56a4a080c67e9679212c838414 157 SUPERFAMILY SSF51283 11 156 1.7E-50 T 25-04-2016 IPR029054 dUTPase-like SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 Pfam PF05199 GMC oxidoreductase 425 548 4.6E-21 T 25-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 Gene3D G3DSA:3.50.50.60 228 336 2.0E-77 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 Gene3D G3DSA:3.50.50.60 3 156 2.0E-77 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 Gene3D G3DSA:3.50.50.60 487 555 2.0E-77 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 Gene3D G3DSA:3.50.50.60 435 448 2.0E-77 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 SUPERFAMILY SSF54373 349 497 2.47E-48 T 25-04-2016 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 SUPERFAMILY SSF51905 496 557 4.24E-65 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 SUPERFAMILY SSF51905 1 59 4.24E-65 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 SUPERFAMILY SSF51905 96 339 4.24E-65 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 PANTHER PTHR11552 7 560 5.8E-49 T 25-04-2016 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 PANTHER PTHR11552:SF139 7 560 5.8E-49 T 25-04-2016 SMD_RS05830 186fc59b6b8e80bdd9acf507b8c05623 561 Pfam PF00732 GMC oxidoreductase 93 312 8.0E-11 T 25-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 Gene3D G3DSA:2.170.130.10 35 172 3.0E-40 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552:SF15 256 374 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552:SF15 624 806 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552:SF15 420 605 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552:SF15 24 234 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552 256 374 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552 624 806 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552 420 605 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 PANTHER PTHR32552 24 234 2.6E-91 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 Gene3D G3DSA:2.40.170.20 173 806 1.7E-103 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 169 3.1E-28 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 SUPERFAMILY SSF56935 42 392 1.91E-126 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 SUPERFAMILY SSF56935 429 806 1.91E-126 T 25-04-2016 SMD_RS05605 b457bda6d30553417d45b7b875a9ac88 806 Pfam PF00593 TonB dependent receptor 518 805 1.4E-36 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 Pfam PF02779 Transketolase, pyrimidine binding domain 33 207 3.9E-43 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 Gene3D G3DSA:3.40.50.920 227 349 1.4E-46 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 SMART SM00861 33 208 1.9E-59 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 Pfam PF02780 Transketolase, C-terminal domain 227 344 1.3E-38 T 25-04-2016 IPR033248 Transketolase, C-terminal domain SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 PANTHER PTHR11624 26 353 1.3E-140 T 25-04-2016 IPR033247 Transketolase family SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 SUPERFAMILY SSF52922 219 351 5.37E-40 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 SUPERFAMILY SSF52518 32 220 5.4E-62 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 Gene3D G3DSA:3.40.50.970 31 223 1.3E-72 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMD_RS20400 c75f4fb3d571c060c91da1c7834eae36 355 PANTHER PTHR11624:SF79 26 353 1.3E-140 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 SUPERFAMILY SSF53067 17 137 1.07E-31 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 PANTHER PTHR30005 1 504 2.9E-198 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 PIRSF PIRSF001267 7 508 3.7E-194 T 25-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 3.8E-96 T 25-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 SUPERFAMILY SSF109604 319 494 3.61E-48 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 Gene3D G3DSA:3.30.420.150 141 314 3.0E-48 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 PANTHER PTHR30005:SF4 1 504 2.9E-198 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 Pfam PF02541 Ppx/GppA phosphatase family 30 313 6.5E-65 T 25-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 Gene3D G3DSA:3.30.420.40 10 135 1.7E-39 T 25-04-2016 SMD_RS04490 bc96fceea427ccf0136cfdd5027e14fb 508 SUPERFAMILY SSF53067 143 314 4.26E-42 T 25-04-2016 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 PANTHER PTHR11019:SF58 66 313 3.9E-74 T 25-04-2016 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 SUPERFAMILY SSF46689 258 308 3.58E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 Gene3D G3DSA:3.40.50.880 4 212 8.5E-43 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 Gene3D G3DSA:1.10.10.60 213 258 1.7E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 SUPERFAMILY SSF52317 1 188 7.94E-41 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 PANTHER PTHR11019 66 313 3.9E-74 T 25-04-2016 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 SMART SM00342 222 305 4.9E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 SUPERFAMILY SSF46689 205 252 3.18E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 Pfam PF01965 DJ-1/PfpI family 66 168 1.1E-12 T 25-04-2016 IPR002818 DJ-1/PfpI SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 Gene3D G3DSA:1.10.10.60 259 307 1.0E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS11535 f532a9433f6ab7e4a6f7005d69d4a8fe 313 Pfam PF12833 Helix-turn-helix domain 228 306 3.1E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 80 104 - T 25-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 15 484 2.5E-47 T 25-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 Gene3D G3DSA:1.20.1250.20 28 205 6.1E-15 T 25-04-2016 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 PANTHER PTHR11654:SF96 281 519 2.2E-159 T 25-04-2016 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 PANTHER PTHR11654:SF96 14 240 2.2E-159 T 25-04-2016 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 PANTHER PTHR11654 281 519 2.2E-159 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 PANTHER PTHR11654 14 240 2.2E-159 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 SUPERFAMILY SSF103473 61 216 3.66E-19 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 SUPERFAMILY SSF103473 291 513 3.66E-19 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS14650 b38f3692ddda3b28678300911dc7dd98 521 Pfam PF00854 POT family 91 462 1.6E-71 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS02485 79d8271f6a10a9c040c181bbd035ad81 693 PANTHER PTHR13833 71 203 3.7E-24 T 25-04-2016 SMD_RS02485 79d8271f6a10a9c040c181bbd035ad81 693 Gene3D G3DSA:2.120.10.30 67 345 7.2E-58 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS02485 79d8271f6a10a9c040c181bbd035ad81 693 SUPERFAMILY SSF101898 69 346 2.88E-44 T 25-04-2016 SMD_RS02485 79d8271f6a10a9c040c181bbd035ad81 693 Pfam PF01436 NHL repeat 123 148 5.6E-7 T 25-04-2016 IPR001258 NHL repeat GO:0005515 SMD_RS02485 79d8271f6a10a9c040c181bbd035ad81 693 Gene3D G3DSA:2.70.70.10 361 514 5.0E-7 T 25-04-2016 SMD_RS00900 b5d527c499c539210694212fa0f08759 444 SUPERFAMILY SSF103473 10 400 3.27E-35 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS00900 b5d527c499c539210694212fa0f08759 444 PANTHER PTHR23513 10 395 4.7E-36 T 25-04-2016 SMD_RS00900 b5d527c499c539210694212fa0f08759 444 Gene3D G3DSA:1.20.1250.20 210 399 1.4E-15 T 25-04-2016 SMD_RS00900 b5d527c499c539210694212fa0f08759 444 Pfam PF07690 Major Facilitator Superfamily 222 403 1.1E-14 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS00900 b5d527c499c539210694212fa0f08759 444 Gene3D G3DSA:1.20.1250.20 8 185 9.5E-16 T 25-04-2016 SMD_RS00900 b5d527c499c539210694212fa0f08759 444 PANTHER PTHR23513:SF4 10 395 4.7E-36 T 25-04-2016 SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 PIRSF PIRSF004950 12 625 6.4E-151 T 25-04-2016 IPR012159 Inner membrane protein YejM SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 SUPERFAMILY SSF53649 260 603 3.27E-57 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 PANTHER PTHR10342:SF235 234 565 2.0E-66 T 25-04-2016 SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 Pfam PF11893 Domain of unknown function (DUF3413) 19 255 2.7E-37 T 25-04-2016 IPR024588 Inner membrane protein YejM, N-terminal SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 Pfam PF00884 Sulfatase 261 541 1.5E-30 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 Gene3D G3DSA:3.40.720.10 261 558 7.6E-35 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMD_RS15505 9bef787896f343af0ad14e49abed3ef9 625 PANTHER PTHR10342 234 565 2.0E-66 T 25-04-2016 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PRINTS PR00969 Pili chaperone signature 131 146 4.5E-36 T 25-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PRINTS PR00969 Pili chaperone signature 166 181 4.5E-36 T 25-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PRINTS PR00969 Pili chaperone signature 103 120 4.5E-36 T 25-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PRINTS PR00969 Pili chaperone signature 26 35 4.5E-36 T 25-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PRINTS PR00969 Pili chaperone signature 75 96 4.5E-36 T 25-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 Gene3D G3DSA:2.60.40.1070 153 236 2.4E-22 T 25-04-2016 IPR016148 Pili assembly chaperone, C-terminal SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PANTHER PTHR30251 21 240 1.1E-84 T 25-04-2016 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 Gene3D G3DSA:2.60.40.360 25 150 9.8E-47 T 25-04-2016 IPR008962 PapD-like SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 150 2.7E-47 T 25-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 PANTHER PTHR30251:SF2 21 240 1.1E-84 T 25-04-2016 SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 25-04-2016 IPR018046 Pili assembly chaperone, conserved site SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 SUPERFAMILY SSF49354 20 149 9.68E-45 T 25-04-2016 IPR008962 PapD-like SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 231 3.9E-17 T 25-04-2016 IPR016148 Pili assembly chaperone, C-terminal SMD_RS03230 ef359f243ab6266ce1e0e085f62dbe02 242 SUPERFAMILY SSF49584 143 235 9.68E-20 T 25-04-2016 IPR016148 Pili assembly chaperone, C-terminal SMD_RS19245 7ea3eeb2ff58fae3606afe6ccbd1a8ac 338 Pfam PF06580 Histidine kinase 146 224 2.1E-21 T 25-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SMD_RS19245 7ea3eeb2ff58fae3606afe6ccbd1a8ac 338 PANTHER PTHR34220:SF3 43 338 1.2E-73 T 25-04-2016 SMD_RS19245 7ea3eeb2ff58fae3606afe6ccbd1a8ac 338 Gene3D G3DSA:3.30.565.10 207 282 2.9E-6 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS19245 7ea3eeb2ff58fae3606afe6ccbd1a8ac 338 PANTHER PTHR34220 43 338 1.2E-73 T 25-04-2016 SMD_RS19245 7ea3eeb2ff58fae3606afe6ccbd1a8ac 338 SUPERFAMILY SSF55874 202 284 1.56E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07970 2d0b0887733b2e6be77bfe28d61ded24 156 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 85 132 3.7E-18 T 25-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 SMD_RS07970 2d0b0887733b2e6be77bfe28d61ded24 156 Pfam PF12728 Helix-turn-helix domain 85 133 4.0E-10 T 25-04-2016 SMD_RS10825 19fc255f4d7f276351f0961f49d1361d 155 PANTHER PTHR38786 1 145 2.2E-35 T 25-04-2016 SMD_RS10825 19fc255f4d7f276351f0961f49d1361d 155 Pfam PF02050 Flagellar FliJ protein 19 137 4.0E-23 T 25-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SMD_RS10825 19fc255f4d7f276351f0961f49d1361d 155 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 139 1.6E-23 T 25-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SMD_RS04700 395f332edc48a16779f577470482d041 682 PANTHER PTHR33375 30 679 8.4E-78 T 25-04-2016 SMD_RS04700 395f332edc48a16779f577470482d041 682 PANTHER PTHR33375:SF2 30 679 8.4E-78 T 25-04-2016 SMD_RS04700 395f332edc48a16779f577470482d041 682 Pfam PF02195 ParB-like nuclease domain 30 124 1.9E-10 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS04700 395f332edc48a16779f577470482d041 682 Gene3D G3DSA:3.90.1530.10 22 130 3.5E-14 T 25-04-2016 SMD_RS04700 395f332edc48a16779f577470482d041 682 SMART SM00470 28 125 3.1E-12 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS04700 395f332edc48a16779f577470482d041 682 SUPERFAMILY SSF109709 119 221 2.09E-19 T 25-04-2016 SMD_RS04700 395f332edc48a16779f577470482d041 682 SUPERFAMILY SSF110849 27 146 2.09E-12 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 Pfam PF12146 Serine aminopeptidase, S33 66 281 3.1E-13 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 PIRSF PIRSF005211 1 329 6.7E-61 T 25-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 Gene3D G3DSA:3.40.50.1820 51 308 5.5E-26 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 SUPERFAMILY SSF53474 42 183 3.71E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 SUPERFAMILY SSF53474 258 325 3.71E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 PANTHER PTHR10794:SF49 9 327 5.2E-135 T 25-04-2016 SMD_RS00630 b8b734220d3df4b367df179111bf2006 329 PANTHER PTHR10794 9 327 5.2E-135 T 25-04-2016 SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 PANTHER PTHR23077 6 55 2.8E-108 T 25-04-2016 SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 PANTHER PTHR23077 202 492 2.8E-108 T 25-04-2016 SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 SMART SM00382 265 398 2.0E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 269 395 2.8E-28 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 Gene3D G3DSA:1.10.8.60 405 448 2.7E-5 T 25-04-2016 SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 Gene3D G3DSA:3.40.50.300 234 404 1.0E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 SUPERFAMILY SSF52540 232 455 7.71E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 PANTHER PTHR23077:SF75 6 55 2.8E-108 T 25-04-2016 SMD_RS00595 7beece267d4dab60e27b6b6805d57407 494 PANTHER PTHR23077:SF75 202 492 2.8E-108 T 25-04-2016 SMD_RS06715 82ebe2e87c47e6b9ec87466b8b843d3f 163 Gene3D G3DSA:1.10.10.10 29 95 1.3E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06715 82ebe2e87c47e6b9ec87466b8b843d3f 163 Pfam PF01475 Ferric uptake regulator family 32 154 7.8E-12 T 25-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SMD_RS06715 82ebe2e87c47e6b9ec87466b8b843d3f 163 PANTHER PTHR33202 8 162 1.9E-69 T 25-04-2016 SMD_RS06715 82ebe2e87c47e6b9ec87466b8b843d3f 163 PANTHER PTHR33202:SF6 8 162 1.9E-69 T 25-04-2016 SMD_RS06715 82ebe2e87c47e6b9ec87466b8b843d3f 163 SUPERFAMILY SSF46785 29 159 1.13E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05275 4b6fcf91b9a9b161cfad2f1202ab9fa3 287 SUPERFAMILY SSF103481 182 285 4.84E-10 T 25-04-2016 SMD_RS05275 4b6fcf91b9a9b161cfad2f1202ab9fa3 287 Pfam PF00892 EamA-like transporter family 6 132 2.7E-10 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS05275 4b6fcf91b9a9b161cfad2f1202ab9fa3 287 Pfam PF00892 EamA-like transporter family 149 280 9.5E-13 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS05275 4b6fcf91b9a9b161cfad2f1202ab9fa3 287 PANTHER PTHR12715:SF9 2 287 1.3E-119 T 25-04-2016 SMD_RS05275 4b6fcf91b9a9b161cfad2f1202ab9fa3 287 SUPERFAMILY SSF103481 43 140 1.06E-8 T 25-04-2016 SMD_RS05275 4b6fcf91b9a9b161cfad2f1202ab9fa3 287 PANTHER PTHR12715 2 287 1.3E-119 T 25-04-2016 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 SMART SM00304 178 230 4.0E-5 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 SUPERFAMILY SSF55874 297 436 1.44E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PANTHER PTHR24423:SF559 172 436 6.2E-42 T 25-04-2016 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PANTHER PTHR24423:SF559 1 20 6.2E-42 T 25-04-2016 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 436 4.5E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 SUPERFAMILY SSF47384 216 285 1.67E-7 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PANTHER PTHR24423 172 436 6.2E-42 T 25-04-2016 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PANTHER PTHR24423 1 20 6.2E-42 T 25-04-2016 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 Gene3D G3DSA:1.10.287.130 224 276 3.4E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 Pfam PF00672 HAMP domain 160 226 3.7E-10 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 SMART SM00387 329 437 2.6E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 SMART SM00388 231 289 0.0013 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 6.7E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 6.7E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 6.7E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS05980 12c04d55b6732be63d43b00b00dd07dd 437 Gene3D G3DSA:3.30.565.10 277 436 2.5E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS20840 9b607ae23cc5ed4411bb28ea00f8368e 66 SUPERFAMILY SSF56784 6 48 4.74E-6 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20840 9b607ae23cc5ed4411bb28ea00f8368e 66 Gene3D G3DSA:3.40.50.1000 9 48 7.4E-6 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20840 9b607ae23cc5ed4411bb28ea00f8368e 66 Pfam PF03031 NLI interacting factor-like phosphatase 13 49 7.9E-6 T 25-04-2016 IPR004274 FCP1 homology domain SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 PANTHER PTHR39323:SF1 6 211 5.2E-41 T 25-04-2016 SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 Gene3D G3DSA:3.60.21.10 30 146 1.5E-9 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 9 208 9.2E-55 T 25-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 SUPERFAMILY SSF56300 30 159 1.66E-11 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 PANTHER PTHR39323 6 211 5.2E-41 T 25-04-2016 SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 PIRSF PIRSF000887 7 209 4.8E-46 T 25-04-2016 IPR024173 Phosphoesterase, MJ0037 SMD_RS16160 8d92a356f8af3e7e555c394486a6e9ce 213 Pfam PF00149 Calcineurin-like phosphoesterase 30 121 1.2E-5 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS08460 3a9212227192045fafc3ca1cf02ca58f 641 Pfam PF05876 Phage terminase large subunit (GpA) 34 587 4.4E-168 T 25-04-2016 IPR008866 Bacteriophage lambda, GpA SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 14 198 31.843 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 Gene3D G3DSA:3.10.300.10 10 204 8.2E-67 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 SUPERFAMILY SSF50486 10 203 3.61E-62 T 25-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 PANTHER PTHR10429 11 209 2.8E-75 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 12 198 1.5E-55 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 PANTHER PTHR10429:SF0 11 209 2.8E-75 T 25-04-2016 SMD_RS12095 369fbe0f27571fb23c318713ec534f62 211 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 15 195 5.8E-62 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 Gene3D G3DSA:3.40.50.1360 82 218 2.2E-8 T 25-04-2016 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 SMART SM01134 77 237 1.5E-43 T 25-04-2016 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 Pfam PF00455 DeoR C terminal sensor domain 82 233 3.6E-34 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 2.0E-7 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 2.0E-7 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 SUPERFAMILY SSF100950 83 238 1.78E-21 T 25-04-2016 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 Pfam PF08220 DeoR-like helix-turn-helix domain 12 65 4.7E-15 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 PANTHER PTHR30363:SF14 8 257 2.4E-57 T 25-04-2016 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 Gene3D G3DSA:1.10.10.10 13 64 5.1E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 SMART SM00420 12 64 1.7E-11 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 SUPERFAMILY SSF46785 11 66 3.28E-10 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05255 a387ca28a22757b319fdc4b041836681 258 PANTHER PTHR30363 8 257 2.4E-57 T 25-04-2016 SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 SUPERFAMILY SSF53850 91 292 9.41E-28 T 25-04-2016 SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 Gene3D G3DSA:3.40.190.10 86 180 4.4E-8 T 25-04-2016 SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 Gene3D G3DSA:1.10.10.10 4 85 2.9E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 SUPERFAMILY SSF46785 5 89 7.18E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 Pfam PF03466 LysR substrate binding domain 91 292 4.0E-24 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 PANTHER PTHR30126:SF4 3 296 5.6E-134 T 25-04-2016 SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.8E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 PANTHER PTHR30126 3 296 5.6E-134 T 25-04-2016 SMD_RS08980 222c76c6749441e5adaf58f247c8e8cd 306 Gene3D G3DSA:3.40.190.10 181 257 1.8E-6 T 25-04-2016 SMD_RS12905 c9f81ccd2083050a47dd6ef07d926983 212 Pfam PF00691 OmpA family 92 196 1.2E-17 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS12905 c9f81ccd2083050a47dd6ef07d926983 212 PANTHER PTHR30128 84 211 3.9E-27 T 25-04-2016 SMD_RS12905 c9f81ccd2083050a47dd6ef07d926983 212 Gene3D G3DSA:3.30.1330.60 82 200 5.0E-30 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS12905 c9f81ccd2083050a47dd6ef07d926983 212 SUPERFAMILY SSF103088 82 201 3.53E-27 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 285 4.1E-60 T 25-04-2016 SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PANTHER PTHR24322:SF105 49 178 3.0E-59 T 25-04-2016 SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PANTHER PTHR24322:SF105 194 226 3.0E-59 T 25-04-2016 SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 SUPERFAMILY SSF51735 43 285 1.72E-80 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 Gene3D G3DSA:3.40.50.720 41 285 2.1E-81 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 1.9E-34 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 1.9E-34 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 1.9E-34 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 1.9E-34 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 1.9E-34 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 1.9E-34 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PANTHER PTHR24322 49 178 3.0E-59 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PANTHER PTHR24322 194 226 3.0E-59 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 9.1E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 9.1E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12130 eef63bf72395888b1f1622eb78e8642c 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 9.1E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS16975 ffa5f856632ce329092b1304ac7a726a 338 Pfam PF05125 Phage major capsid protein, P2 family 9 334 1.8E-142 T 25-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 SMD_RS16975 ffa5f856632ce329092b1304ac7a726a 338 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 335 2.8E-115 T 25-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 SUPERFAMILY SSF52540 166 227 1.31E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 SUPERFAMILY SSF52540 5 47 1.31E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 300 2.0E-91 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 Pfam PF01715 IPP transferase 43 292 1.1E-83 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 30.227 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 Gene3D G3DSA:3.40.50.300 8 176 7.6E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 PANTHER PTHR11088 3 303 7.3E-113 T 25-04-2016 SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 Gene3D G3DSA:1.10.287.890 205 291 9.7E-30 T 25-04-2016 SMD_RS08850 9904b9481d5d65383c3d341166be1534 317 SUPERFAMILY SSF52540 10 155 5.55E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 SUPERFAMILY SSF53474 435 690 2.73E-68 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 PANTHER PTHR11731:SF129 25 691 0.0 T 25-04-2016 SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 Gene3D G3DSA:2.120.10.60 190 372 5.7E-48 T 25-04-2016 SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 Gene3D G3DSA:2.120.10.60 27 148 5.7E-48 T 25-04-2016 SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 Gene3D G3DSA:3.40.50.1820 435 691 8.0E-70 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 Pfam PF00326 Prolyl oligopeptidase family 482 691 2.8E-58 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 Pfam PF07676 WD40-like Beta Propeller Repeat 90 113 0.024 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 Pfam PF07676 WD40-like Beta Propeller Repeat 280 299 0.031 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 PANTHER PTHR11731 25 691 0.0 T 25-04-2016 SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 SUPERFAMILY SSF69304 37 137 8.24E-31 T 25-04-2016 SMD_RS06095 c2860f9adfbda2879e97be4378b4db20 692 SUPERFAMILY SSF69304 231 397 8.24E-31 T 25-04-2016 SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 Pfam PF12840 Helix-turn-helix domain 2 61 4.1E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 Gene3D G3DSA:1.10.10.10 1 84 5.6E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 SUPERFAMILY SSF46785 1 73 3.04E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 SMART SM00418 3 82 6.1E-21 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 35 5.9E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 5.9E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 5.9E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 5.9E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS05910 94065605f2b206b0ea8f7393096790e1 103 PANTHER PTHR33154 1 94 8.1E-20 T 25-04-2016 SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 PANTHER PTHR11603:SF148 19 341 3.9E-143 T 25-04-2016 SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 186 4.3E-62 T 25-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 PANTHER PTHR11603 19 341 3.9E-143 T 25-04-2016 SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 Gene3D G3DSA:1.10.8.300 225 338 4.9E-37 T 25-04-2016 SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 Gene3D G3DSA:3.40.50.300 38 203 4.5E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 SUPERFAMILY SSF52540 26 313 6.6E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 PIRSF PIRSF002849 4 341 2.7E-123 T 25-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SMD_RS17770 3e60d5cbae892b13ddd3394f44fb7db6 341 SMART SM00382 53 194 1.0E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 PIRSF PIRSF003128 1 553 5.5E-146 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 3.6E-20 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 PANTHER PTHR11059 2 552 9.5E-158 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.3E-147 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 Gene3D G3DSA:3.40.50.300 1 204 6.2E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 Gene3D G3DSA:3.40.50.300 400 495 3.1E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 SUPERFAMILY SSF52540 1 198 5.09E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 SUPERFAMILY SSF52540 286 338 5.09E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09470 d63593f3b32c41392c4e511e359702c5 553 SUPERFAMILY SSF52540 367 507 5.09E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 SUPERFAMILY SSF69864 175 396 6.02E-55 T 25-04-2016 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 Gene3D G3DSA:3.40.50.620 1 176 2.7E-40 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 SUPERFAMILY SSF52402 3 185 5.29E-35 T 25-04-2016 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 Gene3D G3DSA:3.90.1260.10 177 397 5.6E-54 T 25-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 PANTHER PTHR11587:SF2 1 397 7.5E-131 T 25-04-2016 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 397 39.014 T 25-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 25-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 PANTHER PTHR11587 1 397 7.5E-131 T 25-04-2016 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 25-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS14955 51060524ab37752d2e619d54a7c443be 398 Pfam PF00764 Arginosuccinate synthase 7 392 1.2E-81 T 25-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMD_RS16090 4986e1a523853c434cb1bb83851e4c02 185 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 6 185 5.9E-53 T 25-04-2016 IPR018636 Protein of unknown function DUF2058 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 322 4.1E-100 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PIRSF PIRSF003161 1 328 2.5E-114 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 Pfam PF14841 FliG middle domain 111 184 2.7E-25 T 25-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 Pfam PF14842 FliG N-terminal domain 1 101 7.4E-33 T 25-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 Pfam PF01706 FliG C-terminal domain 215 320 3.3E-37 T 25-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 16 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PRINTS PR00954 Flagellar motor switch protein FliG signature 110 133 2.2E-65 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 SUPERFAMILY SSF48029 3 117 4.45E-24 T 25-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 Gene3D G3DSA:1.10.220.30 191 325 7.3E-37 T 25-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 SUPERFAMILY SSF48029 110 321 1.23E-65 T 25-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PANTHER PTHR30534 1 328 5.5E-108 T 25-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 Gene3D G3DSA:1.10.220.30 3 69 1.1E-16 T 25-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 Gene3D G3DSA:1.10.220.30 100 187 9.9E-30 T 25-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMD_RS10840 1af3a83e4851de4c572fd95d04a8f5b5 328 PANTHER PTHR30534:SF0 1 328 5.5E-108 T 25-04-2016 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 Gene3D G3DSA:3.40.50.2300 1 121 3.1E-31 T 25-04-2016 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 Gene3D G3DSA:1.10.10.10 122 218 3.0E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 PANTHER PTHR26402 1 219 1.6E-80 T 25-04-2016 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 SMART SM00862 145 216 1.1E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 SMART SM00448 1 112 6.0E-35 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 Pfam PF00072 Response regulator receiver domain 3 112 2.6E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.0E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 PANTHER PTHR26402:SF316 1 219 1.6E-80 T 25-04-2016 SMD_RS20485 b66251435e11b75494bd63e57ded4768 219 SUPERFAMILY SSF52172 1 179 1.57E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS06455 7fbcd2778c0e726f2e942722ca9546bb 486 PANTHER PTHR11206 7 473 2.6E-162 T 25-04-2016 SMD_RS06455 7fbcd2778c0e726f2e942722ca9546bb 486 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 425 2.5E-71 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS06455 7fbcd2778c0e726f2e942722ca9546bb 486 Pfam PF01554 MatE 23 184 4.9E-30 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS06455 7fbcd2778c0e726f2e942722ca9546bb 486 Pfam PF01554 MatE 252 412 1.1E-25 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS06455 7fbcd2778c0e726f2e942722ca9546bb 486 PANTHER PTHR11206:SF107 7 473 2.6E-162 T 25-04-2016 SMD_RS06455 7fbcd2778c0e726f2e942722ca9546bb 486 PIRSF PIRSF006603 1 460 9.8E-117 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS07170 62fdbfbf6b4aa33eeb55b43f6cc99582 160 PANTHER PTHR33337 3 130 5.7E-45 T 25-04-2016 SMD_RS07170 62fdbfbf6b4aa33eeb55b43f6cc99582 160 PANTHER PTHR33337:SF4 3 130 5.7E-45 T 25-04-2016 SMD_RS07170 62fdbfbf6b4aa33eeb55b43f6cc99582 160 SUPERFAMILY SSF51316 5 129 1.36E-40 T 25-04-2016 IPR011057 Mss4-like SMD_RS07170 62fdbfbf6b4aa33eeb55b43f6cc99582 160 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 109 1.0E-18 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS07170 62fdbfbf6b4aa33eeb55b43f6cc99582 160 Gene3D G3DSA:3.90.1590.10 4 158 9.5E-44 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 SMART SM00829 11 327 6.4E-30 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 1.6E-9 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 SUPERFAMILY SSF50129 3 151 4.87E-36 T 25-04-2016 IPR011032 GroES-like SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 PANTHER PTHR11695:SF605 16 329 9.1E-88 T 25-04-2016 SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 Pfam PF00107 Zinc-binding dehydrogenase 158 273 7.9E-24 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 Gene3D G3DSA:3.40.50.720 152 267 2.2E-26 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 PANTHER PTHR11695 16 329 9.1E-88 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 Gene3D G3DSA:3.90.180.10 3 151 7.8E-41 T 25-04-2016 IPR011032 GroES-like SMD_RS14170 fb01fd7c8c71126a3eddd9f0b76c299d 329 SUPERFAMILY SSF51735 118 275 3.37E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 Gene3D G3DSA:2.70.98.10 43 356 8.0E-77 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 Gene3D G3DSA:3.30.2080.10 659 803 1.2E-48 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 38 795 5.4E-148 T 25-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 Gene3D G3DSA:1.20.1050.60 381 470 1.1E-23 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 Pfam PF07971 Glycosyl hydrolase family 92 270 792 3.0E-140 T 25-04-2016 IPR012939 Glycosyl hydrolase family 92 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143 421 469 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143 487 812 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143 129 405 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143 18 113 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143:SF22 421 469 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143:SF22 487 812 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143:SF22 129 405 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 PANTHER PTHR12143:SF22 18 113 5.2E-100 T 25-04-2016 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 SUPERFAMILY SSF48208 307 749 3.51E-18 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS10350 27000a2fc0008f7c1adf08033018a7c2 821 Gene3D G3DSA:1.20.1610.10 479 658 3.2E-46 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 Gene3D G3DSA:3.40.50.2300 19 137 6.0E-9 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 SMART SM00448 19 132 0.015 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 SMART SM00448 141 255 1.2E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 Gene3D G3DSA:3.30.70.270 274 432 6.0E-50 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 432 1.6E-50 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 Pfam PF00072 Response regulator receiver domain 144 252 1.4E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 429 4.1E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 SUPERFAMILY SSF52172 19 140 1.08E-11 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 SMART SM00267 261 433 3.0E-53 T 25-04-2016 IPR000160 GGDEF domain SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 SUPERFAMILY SSF55073 277 432 2.51E-46 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 PANTHER PTHR10799 20 109 5.5E-28 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 PANTHER PTHR10799 305 430 5.5E-28 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 PANTHER PTHR10799:SF750 20 109 5.5E-28 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 PANTHER PTHR10799:SF750 305 430 5.5E-28 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 Gene3D G3DSA:3.40.50.2300 138 260 1.2E-29 T 25-04-2016 SMD_RS07355 5df00c688ebfb04255a32c5ee5b20d5c 447 SUPERFAMILY SSF52172 142 271 1.57E-30 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 111 544 1.7E-82 T 25-04-2016 IPR005181 Sialate O-acetylesterase domain SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 Gene3D G3DSA:2.60.120.260 286 370 7.7E-11 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 PANTHER PTHR22901 390 657 1.3E-148 T 25-04-2016 SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 PANTHER PTHR22901 9 230 1.3E-148 T 25-04-2016 SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 SUPERFAMILY SSF49785 268 375 3.4E-14 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 PANTHER PTHR22901:SF1 390 657 1.3E-148 T 25-04-2016 SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 PANTHER PTHR22901:SF1 9 230 1.3E-148 T 25-04-2016 SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 SUPERFAMILY SSF52266 421 603 2.11E-64 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS11740 074e45cf489c12cda3cca84d9ae6a9e6 662 SUPERFAMILY SSF52266 110 214 2.11E-64 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.3E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.3E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.3E-7 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 2.2E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 SMART SM00421 150 207 1.2E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 Gene3D G3DSA:3.40.50.2300 2 123 1.7E-27 T 25-04-2016 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 Gene3D G3DSA:1.10.10.10 124 208 2.2E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 PANTHER PTHR26402:SF458 3 206 3.3E-47 T 25-04-2016 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 SUPERFAMILY SSF52172 2 134 2.13E-26 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 Pfam PF00072 Response regulator receiver domain 5 120 4.7E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 PANTHER PTHR26402 3 206 3.3E-47 T 25-04-2016 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 SMART SM00448 3 119 1.3E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01020 88b4d08281f34cb4da5a0ed8899f2924 212 SUPERFAMILY SSF46894 150 208 4.76E-15 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 1.0E-35 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 SUPERFAMILY SSF46604 87 136 1.86E-10 T 25-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 3.6E-43 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 9.6E-28 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 Gene3D G3DSA:2.60.15.10 3 90 1.8E-29 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 1.2E-8 T 25-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 Gene3D G3DSA:1.20.5.440 91 133 1.5E-6 T 25-04-2016 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 20.023 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 SUPERFAMILY SSF51344 3 85 5.49E-23 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19135 df9d29210ed22ff0c80de2f454bbac9a 140 PANTHER PTHR13822 1 139 4.0E-40 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS02445 e71d9530c421121488e21a977afe553d 535 Gene3D G3DSA:3.40.50.300 355 515 2.5E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02445 e71d9530c421121488e21a977afe553d 535 SUPERFAMILY SSF52540 355 515 7.43E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02445 e71d9530c421121488e21a977afe553d 535 SUPERFAMILY SSF52540 5 83 2.75E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02445 e71d9530c421121488e21a977afe553d 535 SUPERFAMILY SSF52540 112 232 2.75E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02445 e71d9530c421121488e21a977afe553d 535 Gene3D G3DSA:3.40.50.300 8 264 6.1E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02445 e71d9530c421121488e21a977afe553d 535 PANTHER PTHR19211:SF6 5 527 2.1E-137 T 25-04-2016 SMD_RS02445 e71d9530c421121488e21a977afe553d 535 PANTHER PTHR19211 5 527 2.1E-137 T 25-04-2016 SMD_RS02445 e71d9530c421121488e21a977afe553d 535 SMART SM00382 361 525 1.7E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02445 e71d9530c421121488e21a977afe553d 535 SMART SM00382 30 216 1.4E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS02445 e71d9530c421121488e21a977afe553d 535 Pfam PF00005 ABC transporter 33 171 6.5E-14 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS02445 e71d9530c421121488e21a977afe553d 535 Pfam PF00005 ABC transporter 355 481 4.2E-18 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS20275 3e1e52cadc9afad1ad457da28f9c54bd 259 Pfam PF04402 Protein of unknown function (DUF541) 35 253 1.1E-29 T 25-04-2016 IPR007497 Protein of unknown function DUF541 SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 SUPERFAMILY SSF52540 419 520 9.21E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 SUPERFAMILY SSF52540 305 357 9.21E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 SUPERFAMILY SSF52540 44 110 9.21E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 Gene3D G3DSA:3.40.50.300 1 59 4.6E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 Gene3D G3DSA:3.40.50.300 298 314 2.0E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 Gene3D G3DSA:3.40.50.300 60 117 2.0E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 Gene3D G3DSA:3.40.50.300 389 520 2.0E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 TIGRFAM TIGR04435 restrict_AAA_1: restriction system-associated AAA family ATPase 1 602 7.2E-242 T 25-04-2016 IPR030974 Restriction system-associated AAA family ATPase SMD_RS09840 a41cea9e260c1b7e3fee2efb81539161 612 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 400 506 1.2E-11 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS18215 57c9b689b131faf54190a71a48a61395 223 Pfam PF07885 Ion channel 135 215 8.9E-9 T 25-04-2016 IPR013099 Potassium channel domain SMD_RS18215 57c9b689b131faf54190a71a48a61395 223 Gene3D G3DSA:1.10.287.70 124 215 2.7E-7 T 25-04-2016 SMD_RS18215 57c9b689b131faf54190a71a48a61395 223 SUPERFAMILY SSF81324 125 217 2.62E-10 T 25-04-2016 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 Gene3D G3DSA:1.20.1080.10 3 235 4.8E-64 T 25-04-2016 IPR023271 Aquaporin-like SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PANTHER PTHR19139:SF103 9 235 2.3E-66 T 25-04-2016 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 Hamap MF_01146 Aquaporin Z [aqpZ]. 4 239 33.383 T 25-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 TIGRFAM TIGR00861 MIP: MIP family channel proteins 9 232 6.6E-56 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PRINTS PR00783 Major intrinsic protein family signature 86 105 7.5E-49 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PRINTS PR00783 Major intrinsic protein family signature 5 24 7.5E-49 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PRINTS PR00783 Major intrinsic protein family signature 215 235 7.5E-49 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PRINTS PR00783 Major intrinsic protein family signature 176 198 7.5E-49 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PRINTS PR00783 Major intrinsic protein family signature 146 164 7.5E-49 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PRINTS PR00783 Major intrinsic protein family signature 49 73 7.5E-49 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 PANTHER PTHR19139 9 235 2.3E-66 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 ProSitePatterns PS00221 MIP family signature. 67 75 - T 25-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 SUPERFAMILY SSF81338 5 235 1.02E-63 T 25-04-2016 IPR023271 Aquaporin-like SMD_RS16270 edd72ab08c47245b4dc129bff3ffd882 239 Pfam PF00230 Major intrinsic protein 5 232 9.8E-47 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 SUPERFAMILY SSF52833 1 78 3.66E-18 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 PANTHER PTHR11260:SF154 1 197 1.3E-35 T 25-04-2016 SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 SUPERFAMILY SSF47616 83 201 3.48E-22 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 5.9E-11 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 Gene3D G3DSA:1.20.1050.10 88 189 2.1E-26 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 PANTHER PTHR11260 1 197 1.3E-35 T 25-04-2016 SMD_RS04365 d14e4448c5634a11a19e2d90f3e1ea0a 203 Gene3D G3DSA:3.40.30.10 1 87 6.9E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 SUPERFAMILY SSF54523 41 143 2.56E-35 T 25-04-2016 SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 1.2E-8 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 Pfam PF08334 Type II secretion system (T2SS), protein G 37 143 4.3E-40 T 25-04-2016 IPR013545 Type II secretion system protein G SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 PANTHER PTHR30093:SF9 8 144 4.2E-59 T 25-04-2016 SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 Pfam PF13633 Prokaryotic N-terminal methylation site 12 36 2.5E-9 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 Gene3D G3DSA:3.30.700.10 15 80 7.7E-11 T 25-04-2016 SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 PANTHER PTHR30093 8 144 4.2E-59 T 25-04-2016 SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 1.1E-17 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 1.1E-17 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12635 cea7edc7ad712bc7453a2172eae4ee5c 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 144 3.4E-52 T 25-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SMD_RS13765 932d8fc7f8e9529bbac99989dac353bc 88 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 1 67 1.7E-14 T 25-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB SMD_RS17995 8cb397498780801fa6e1c250b496e1c2 159 Gene3D G3DSA:3.10.590.10 6 154 1.5E-30 T 25-04-2016 IPR002740 EVE domain SMD_RS17995 8cb397498780801fa6e1c250b496e1c2 159 SUPERFAMILY SSF88697 5 157 3.89E-60 T 25-04-2016 IPR015947 PUA-like domain SMD_RS17995 8cb397498780801fa6e1c250b496e1c2 159 Pfam PF01878 EVE domain 6 154 4.7E-56 T 25-04-2016 IPR002740 EVE domain SMD_RS17995 8cb397498780801fa6e1c250b496e1c2 159 PANTHER PTHR14087 1 158 5.6E-83 T 25-04-2016 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.51 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.8E-54 T 25-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 Pfam PF00411 Ribosomal protein S11 19 128 5.0E-50 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 Gene3D G3DSA:3.30.420.80 7 129 3.1E-52 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 PANTHER PTHR11759 11 129 8.9E-68 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 25-04-2016 IPR018102 Ribosomal S11, conserved site SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 PIRSF PIRSF002131 1 129 3.6E-52 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMD_RS04280 976f1710a7a6d1c5d4ebd742298383de 129 SUPERFAMILY SSF53137 16 129 6.54E-46 T 25-04-2016 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 Pfam PF00672 HAMP domain 64 134 2.9E-16 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 SUPERFAMILY SSF55874 192 357 1.19E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 Gene3D G3DSA:3.30.565.10 204 357 2.2E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 SUPERFAMILY SSF158472 84 135 7.98E-7 T 25-04-2016 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 Gene3D G3DSA:1.10.287.130 128 196 1.4E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 SMART SM00387 248 358 6.0E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PANTHER PTHR24423 5 11 2.7E-76 T 25-04-2016 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PANTHER PTHR24423 77 356 2.7E-76 T 25-04-2016 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 201 6.1E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 SUPERFAMILY SSF47384 121 200 2.55E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 SMART SM00304 83 137 1.5E-10 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 SMART SM00388 138 202 1.5E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 357 1.8E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 356 2.0E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 2.0E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 337 2.0E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 2.0E-16 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PANTHER PTHR24423:SF508 5 11 2.7E-76 T 25-04-2016 SMD_RS10430 4af8010353d11ad1723792d5637e41d7 358 PANTHER PTHR24423:SF508 77 356 2.7E-76 T 25-04-2016 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 SUPERFAMILY SSF46955 8 130 1.98E-28 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 5 62 4.0E-22 T 25-04-2016 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 PANTHER PTHR30204 1 117 3.8E-25 T 25-04-2016 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 PANTHER PTHR30204:SF18 1 117 3.8E-25 T 25-04-2016 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 7.8E-50 T 25-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF09278 MerR, DNA binding 51 113 2.9E-18 T 25-04-2016 IPR015358 Transcription regulator MerR, DNA binding SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 1.2E-22 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 1.2E-22 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 1.2E-22 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 SMART SM00422 8 77 3.1E-29 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 63 133 5.0E-25 T 25-04-2016 SMD_RS08135 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF00376 MerR family regulatory protein 9 46 3.0E-11 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS13340 373dcce13e264bcb406661af15af41db 150 PRINTS PR01837 MgtC/SapB protein signature 101 125 1.88E-30 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13340 373dcce13e264bcb406661af15af41db 150 PRINTS PR01837 MgtC/SapB protein signature 16 35 1.88E-30 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13340 373dcce13e264bcb406661af15af41db 150 PRINTS PR01837 MgtC/SapB protein signature 35 53 1.88E-30 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13340 373dcce13e264bcb406661af15af41db 150 PRINTS PR01837 MgtC/SapB protein signature 72 94 1.88E-30 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13340 373dcce13e264bcb406661af15af41db 150 Pfam PF02308 MgtC family 14 147 1.3E-31 T 25-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SMD_RS13340 373dcce13e264bcb406661af15af41db 150 PANTHER PTHR33778 1 149 1.4E-32 T 25-04-2016 SMD_RS18005 61140ae496f070cdf55ae8adbeacfe8d 148 PANTHER PTHR37953 26 148 9.5E-40 T 25-04-2016 SMD_RS18005 61140ae496f070cdf55ae8adbeacfe8d 148 PANTHER PTHR37953:SF1 26 148 9.5E-40 T 25-04-2016 SMD_RS18005 61140ae496f070cdf55ae8adbeacfe8d 148 Pfam PF02643 Uncharacterized ACR, COG1430 35 141 3.2E-32 T 25-04-2016 IPR003795 Protein of unknown function DUF192 SMD_RS13675 5fb9470c818eda46f0c234cc1d3e09d7 371 PANTHER PTHR22893:SF24 1 369 7.4E-214 T 25-04-2016 SMD_RS13675 5fb9470c818eda46f0c234cc1d3e09d7 371 Gene3D G3DSA:3.20.20.70 2 364 1.2E-129 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS13675 5fb9470c818eda46f0c234cc1d3e09d7 371 SUPERFAMILY SSF51395 2 367 2.32E-122 T 25-04-2016 SMD_RS13675 5fb9470c818eda46f0c234cc1d3e09d7 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 344 7.6E-83 T 25-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMD_RS13675 5fb9470c818eda46f0c234cc1d3e09d7 371 PANTHER PTHR22893 1 369 7.4E-214 T 25-04-2016 SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 SUPERFAMILY SSF53774 1 156 1.57E-31 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 PIRSF PIRSF001220 1 161 2.5E-19 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 Gene3D G3DSA:3.40.50.1170 2 158 2.5E-28 T 25-04-2016 IPR027474 L-asparaginase, N-terminal SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 3.0E-5 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.0E-5 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 Pfam PF00710 Asparaginase, N-terminal 4 155 1.8E-21 T 25-04-2016 IPR027474 L-asparaginase, N-terminal SMD_RS03955 c0b886a46b0890be3fb470f655a62a4e 161 PIRSF PIRSF500176 1 160 6.8E-21 T 25-04-2016 SMD_RS11625 15ed12a0ce587ac2fde7779225d91b92 115 SUPERFAMILY SSF54975 4 85 1.05E-22 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS11625 15ed12a0ce587ac2fde7779225d91b92 115 Pfam PF04940 Sensors of blue-light using FAD 4 77 1.5E-20 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS11625 15ed12a0ce587ac2fde7779225d91b92 115 SMART SM01034 1 78 3.4E-11 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 94 1651 0.0 T 25-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 Gene3D G3DSA:3.40.50.720 1153 1233 2.8E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 Gene3D G3DSA:3.40.50.720 993 1104 2.8E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606 728 1150 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606 1175 1420 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606 228 576 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606 29 168 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PIRSF PIRSF036761 25 1658 0.0 T 25-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 Pfam PF12466 Glutamate dehydrogenase N terminal 5 90 1.5E-34 T 25-04-2016 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606:SF1 728 1150 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606:SF1 1175 1420 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606:SF1 228 576 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 PANTHER PTHR11606:SF1 29 168 0.0 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 SUPERFAMILY SSF53223 806 992 6.23E-20 T 25-04-2016 SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 SUPERFAMILY SSF51735 1136 1268 5.05E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14330 a18ef3aaaabda443435b61fe3c4dd76a 1658 SUPERFAMILY SSF51735 996 1098 5.05E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS20555 1a721158dd005e24101a30da19b52655 200 Pfam PF06197 Protein of unknown function (DUF998) 17 184 2.2E-17 T 25-04-2016 IPR009339 Protein of unknown function DUF998 SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 PANTHER PTHR13903 1 287 6.0E-132 T 25-04-2016 IPR012093 Pirin SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 SUPERFAMILY SSF51182 3 284 3.64E-80 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 Pfam PF02678 Pirin 16 120 1.2E-34 T 25-04-2016 IPR003829 Pirin, N-terminal domain SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 Pfam PF05726 Pirin C-terminal cupin domain 174 272 1.4E-25 T 25-04-2016 IPR008778 Pirin, C-terminal domain SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 PANTHER PTHR13903:SF4 1 287 6.0E-132 T 25-04-2016 SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 PIRSF PIRSF006232 1 280 4.9E-90 T 25-04-2016 IPR012093 Pirin SMD_RS16265 2b1375c9e7716db199d4d77c60b3245e 287 Gene3D G3DSA:2.60.120.10 6 244 4.9E-67 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS06900 57bacb6e7cc310ae7e778dd498d26635 290 Pfam PF00892 EamA-like transporter family 20 144 2.8E-23 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS06900 57bacb6e7cc310ae7e778dd498d26635 290 Pfam PF00892 EamA-like transporter family 156 286 2.3E-18 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS06900 57bacb6e7cc310ae7e778dd498d26635 290 SUPERFAMILY SSF103481 192 287 2.22E-16 T 25-04-2016 SMD_RS06900 57bacb6e7cc310ae7e778dd498d26635 290 PANTHER PTHR12715:SF17 1 288 1.7E-93 T 25-04-2016 SMD_RS06900 57bacb6e7cc310ae7e778dd498d26635 290 SUPERFAMILY SSF103481 48 146 3.53E-18 T 25-04-2016 SMD_RS06900 57bacb6e7cc310ae7e778dd498d26635 290 PANTHER PTHR12715 1 288 1.7E-93 T 25-04-2016 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 SUPERFAMILY SSF56235 32 565 4.63E-168 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PANTHER PTHR11686 1 564 4.7E-201 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PANTHER PTHR11686:SF9 1 564 4.7E-201 T 25-04-2016 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 Pfam PF01019 Gamma-glutamyltranspeptidase 49 565 3.0E-165 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 36 564 4.8E-141 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 461 478 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 167 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 415 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS09240 3cf7484eec30728317613b5b821d9224 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 438 453 5.2E-67 T 25-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 PANTHER PTHR34040 1 89 1.3E-30 T 25-04-2016 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 Pfam PF01313 Bacterial export proteins, family 3 10 77 3.1E-19 T 25-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.7E-13 T 25-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.7E-13 T 25-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.7E-13 T 25-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 PANTHER PTHR34040:SF2 1 89 1.3E-30 T 25-04-2016 SMD_RS10790 2793e5d38a8b24733885cca94d2dacd8 89 PIRSF PIRSF004669 1 89 2.9E-22 T 25-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 2.4E-113 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PANTHER PTHR11735 1 340 3.8E-155 T 25-04-2016 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 SUPERFAMILY SSF53067 105 313 7.45E-42 T 25-04-2016 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 SUPERFAMILY SSF53067 3 127 1.42E-30 T 25-04-2016 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 Pfam PF00814 Glycoprotease family 29 311 5.5E-100 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 4.8E-52 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 4.8E-52 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 4.8E-52 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 4.8E-52 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 4.8E-52 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.8E-52 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 PANTHER PTHR11735:SF6 1 340 3.8E-155 T 25-04-2016 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 9.8E-130 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 Gene3D G3DSA:3.30.420.40 1 163 3.7E-48 T 25-04-2016 SMD_RS02110 29c226fee81d73721a9fdb9f96078586 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.465 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMD_RS02580 5a2f5bd11d9e0d9855509f7c28c6db27 390 PANTHER PTHR23501:SF4 13 390 1.9E-97 T 25-04-2016 SMD_RS02580 5a2f5bd11d9e0d9855509f7c28c6db27 390 Gene3D G3DSA:1.20.1250.20 216 389 2.3E-12 T 25-04-2016 SMD_RS02580 5a2f5bd11d9e0d9855509f7c28c6db27 390 PANTHER PTHR23501 13 390 1.9E-97 T 25-04-2016 SMD_RS02580 5a2f5bd11d9e0d9855509f7c28c6db27 390 Pfam PF07690 Major Facilitator Superfamily 25 355 1.1E-35 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS02580 5a2f5bd11d9e0d9855509f7c28c6db27 390 SUPERFAMILY SSF103473 9 389 2.09E-55 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS02580 5a2f5bd11d9e0d9855509f7c28c6db27 390 Gene3D G3DSA:1.20.1250.20 17 197 1.8E-25 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SMART SM00387 805 923 1.2E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 862 1.3E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 883 901 1.3E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 876 1.3E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 907 920 1.3E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF00512 His Kinase A (phospho-acceptor) domain 693 758 1.3E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF52172 948 1072 1.27E-32 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF55785 590 674 8.58E-7 T 25-04-2016 IPR000014 PAS domain SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 288 505 2.0E-19 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 263 1.4E-22 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.30.450.20 550 671 4.9E-13 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:1.20.120.160 1102 1196 2.3E-9 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF01627 Hpt domain 1110 1192 2.4E-5 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PANTHER PTHR24423:SF382 632 1107 2.9E-147 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PANTHER PTHR24423:SF382 76 106 2.9E-147 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.40.190.10 369 452 2.8E-10 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF53850 288 508 3.39E-29 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF47384 678 758 1.26E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PANTHER PTHR24423 632 1107 2.9E-147 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 PANTHER PTHR24423 76 106 2.9E-147 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF55874 747 920 2.23E-43 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.40.190.10 287 368 1.0E-5 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.40.190.10 226 264 3.4E-15 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.40.190.10 43 131 3.4E-15 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.40.190.10 467 507 1.0E-5 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF53850 46 267 4.12E-35 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.40.50.2300 946 1073 1.2E-33 T 25-04-2016 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 806 920 1.5E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF08447 PAS fold 589 662 1.8E-6 T 25-04-2016 IPR013655 PAS fold-3 GO:0005515 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Pfam PF00072 Response regulator receiver domain 951 1065 5.3E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SMART SM00062 287 507 1.6E-13 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SMART SM00062 45 266 3.6E-10 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SMART SM00388 693 758 4.5E-23 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:1.10.287.130 686 754 4.1E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SMART SM00448 949 1065 3.2E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF47226 1048 1061 7.07E-11 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 SUPERFAMILY SSF47226 1091 1189 7.07E-11 T 25-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMD_RS01025 d974bf8241fd95ae1584624ab5b23070 1199 Gene3D G3DSA:3.30.565.10 760 923 4.6E-42 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PRINTS PR01008 Flagellar L-ring protein signature 169 185 2.5E-24 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PRINTS PR01008 Flagellar L-ring protein signature 206 220 2.5E-24 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PRINTS PR01008 Flagellar L-ring protein signature 70 82 2.5E-24 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PRINTS PR01008 Flagellar L-ring protein signature 190 204 2.5E-24 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PRINTS PR01008 Flagellar L-ring protein signature 143 158 2.5E-24 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 Pfam PF02107 Flagellar L-ring protein 48 227 2.3E-58 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PANTHER PTHR34933 15 230 8.0E-88 T 25-04-2016 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 PANTHER PTHR34933:SF2 15 230 8.0E-88 T 25-04-2016 SMD_RS10935 df42cf3f2ecaf14d75ae3b092ce55389 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 4 227 25.757 T 25-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMD_RS05195 13c06c9615ab9120dd68cc368b91d5c0 318 Pfam PF13177 DNA polymerase III, delta subunit 8 168 1.7E-34 T 25-04-2016 SMD_RS05195 13c06c9615ab9120dd68cc368b91d5c0 318 Gene3D G3DSA:1.10.8.10 163 209 9.2E-4 T 25-04-2016 SMD_RS05195 13c06c9615ab9120dd68cc368b91d5c0 318 PANTHER PTHR11669 8 210 3.0E-55 T 25-04-2016 SMD_RS05195 13c06c9615ab9120dd68cc368b91d5c0 318 PANTHER PTHR11669:SF8 8 210 3.0E-55 T 25-04-2016 SMD_RS05195 13c06c9615ab9120dd68cc368b91d5c0 318 Gene3D G3DSA:3.40.50.300 6 162 1.3E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05195 13c06c9615ab9120dd68cc368b91d5c0 318 SUPERFAMILY SSF52540 6 208 5.33E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 Pfam PF00364 Biotin-requiring enzyme 85 158 8.7E-22 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 PANTHER PTHR23151 1 158 1.2E-45 T 25-04-2016 SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 Gene3D G3DSA:2.40.50.100 83 158 4.2E-30 T 25-04-2016 SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 158 1.6E-51 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 SUPERFAMILY SSF51230 84 158 3.14E-23 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 115 132 - T 25-04-2016 IPR001882 Biotin-binding site SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 88 101 3.0E-14 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 120 133 3.0E-14 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMD_RS19920 49bfd18126c3d79e166ba1d8f8877b03 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 105 119 3.0E-14 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 SMART SM00388 228 284 5.2E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 Pfam PF00672 HAMP domain 156 224 2.7E-16 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 SUPERFAMILY SSF47384 212 282 6.67E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 Gene3D G3DSA:1.10.287.130 218 269 1.9E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 SUPERFAMILY SSF55874 289 430 1.01E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 PANTHER PTHR24423 1 7 1.6E-58 T 25-04-2016 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 PANTHER PTHR24423 169 435 1.6E-58 T 25-04-2016 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 SMART SM00387 323 432 1.4E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 3.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 3.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 Gene3D G3DSA:3.30.565.10 295 432 5.5E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 SUPERFAMILY SSF158472 175 224 1.03E-6 T 25-04-2016 SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 430 1.1E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS04830 bd931aca3615bf72759cda1ff34a88d8 435 SMART SM00304 175 227 2.3E-11 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS16565 0b87f50d7869fca63082b01508501b79 190 Pfam PF01292 Prokaryotic cytochrome b561 10 180 3.2E-30 T 25-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMD_RS16565 0b87f50d7869fca63082b01508501b79 190 PANTHER PTHR30529:SF5 2 184 8.2E-75 T 25-04-2016 SMD_RS16565 0b87f50d7869fca63082b01508501b79 190 SUPERFAMILY SSF81342 4 183 3.92E-37 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMD_RS16565 0b87f50d7869fca63082b01508501b79 190 PANTHER PTHR30529 2 184 8.2E-75 T 25-04-2016 SMD_RS13710 dfdc97b2df0eb2cf117d43f84cc43766 168 PANTHER PTHR23091 4 164 1.5E-30 T 25-04-2016 SMD_RS13710 dfdc97b2df0eb2cf117d43f84cc43766 168 SUPERFAMILY SSF55729 4 146 4.73E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS13710 dfdc97b2df0eb2cf117d43f84cc43766 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 9.1E-13 T 25-04-2016 SMD_RS13710 dfdc97b2df0eb2cf117d43f84cc43766 168 Gene3D G3DSA:3.40.630.30 3 130 5.8E-25 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS13710 dfdc97b2df0eb2cf117d43f84cc43766 168 PANTHER PTHR23091:SF237 4 164 1.5E-30 T 25-04-2016 SMD_RS15635 4919bf9458aa1ccd8ee7d3bd02072d61 501 PANTHER PTHR30121:SF3 4 442 1.1E-179 T 25-04-2016 SMD_RS15635 4919bf9458aa1ccd8ee7d3bd02072d61 501 Pfam PF05872 Bacterial protein of unknown function (DUF853) 14 501 1.2E-218 T 25-04-2016 IPR033186 Helicase HerA-like C-terminal SMD_RS15635 4919bf9458aa1ccd8ee7d3bd02072d61 501 PANTHER PTHR30121 4 442 1.1E-179 T 25-04-2016 SMD_RS15635 4919bf9458aa1ccd8ee7d3bd02072d61 501 SUPERFAMILY SSF52540 3 385 1.78E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15635 4919bf9458aa1ccd8ee7d3bd02072d61 501 Gene3D G3DSA:3.40.50.300 205 381 2.8E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15635 4919bf9458aa1ccd8ee7d3bd02072d61 501 Gene3D G3DSA:3.40.50.300 2 109 2.8E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS18185 dd424455ea844cb3905efb53b439fae9 178 Pfam PF00719 Inorganic pyrophosphatase 18 172 6.6E-52 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS18185 dd424455ea844cb3905efb53b439fae9 178 SUPERFAMILY SSF50324 6 173 2.22E-66 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS18185 dd424455ea844cb3905efb53b439fae9 178 Gene3D G3DSA:3.90.80.10 6 173 3.0E-61 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS18185 dd424455ea844cb3905efb53b439fae9 178 PANTHER PTHR10286 6 172 1.5E-73 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS18185 dd424455ea844cb3905efb53b439fae9 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.597 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 Gene3D G3DSA:3.40.190.10 96 197 1.5E-14 T 25-04-2016 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 Gene3D G3DSA:1.10.10.10 13 94 4.6E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 Gene3D G3DSA:3.40.190.10 198 247 3.1E-11 T 25-04-2016 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 SUPERFAMILY SSF46785 7 119 1.26E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 SUPERFAMILY SSF53850 101 291 9.0E-27 T 25-04-2016 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 Pfam PF03466 LysR substrate binding domain 100 286 2.9E-29 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 PANTHER PTHR30579:SF0 7 291 3.3E-95 T 25-04-2016 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 PANTHER PTHR30579 7 291 3.3E-95 T 25-04-2016 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.5E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.5E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.5E-6 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13270 2151f075d9e3e3be7a49e1a405814e67 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 1.1E-19 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS04380 53e4d83013864e630d5963b19f475008 209 PANTHER PTHR40078:SF1 5 192 5.6E-40 T 25-04-2016 SMD_RS04380 53e4d83013864e630d5963b19f475008 209 PANTHER PTHR40078 5 192 5.6E-40 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 Gene3D G3DSA:3.60.21.10 168 423 2.7E-5 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 SUPERFAMILY SSF56300 155 496 2.04E-27 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 PANTHER PTHR22953:SF28 216 325 9.3E-97 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 PANTHER PTHR22953:SF28 346 409 9.3E-97 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 PANTHER PTHR22953:SF28 39 195 9.3E-97 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 49 145 2.1E-30 T 25-04-2016 IPR032093 Phospholipase D, N-terminal SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 PANTHER PTHR22953 216 325 9.3E-97 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 PANTHER PTHR22953 346 409 9.3E-97 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 PANTHER PTHR22953 39 195 9.3E-97 T 25-04-2016 SMD_RS14490 4f54edfcc6612ee84172f6971fb2e5b7 530 Pfam PF09423 PhoD-like phosphatase 158 497 3.1E-95 T 25-04-2016 IPR018946 Alkaline phosphatase D-related SMD_RS09275 891264c0789555cdbe829aa05b0d2120 371 Gene3D G3DSA:2.120.10.20 45 368 6.7E-46 T 25-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 SMD_RS09275 891264c0789555cdbe829aa05b0d2120 371 Pfam PF01436 NHL repeat 109 134 1.2E-5 T 25-04-2016 IPR001258 NHL repeat GO:0005515 SMD_RS09275 891264c0789555cdbe829aa05b0d2120 371 SUPERFAMILY SSF50956 55 370 2.09E-34 T 25-04-2016 SMD_RS17765 d26e654ff5b87280208c756787a3187c 309 PANTHER PTHR33608:SF6 18 301 5.0E-93 T 25-04-2016 SMD_RS17765 d26e654ff5b87280208c756787a3187c 309 Pfam PF01882 Protein of unknown function DUF58 57 141 2.5E-20 T 25-04-2016 IPR002881 Domain of unknown function DUF58 SMD_RS17765 d26e654ff5b87280208c756787a3187c 309 PANTHER PTHR33608 18 301 5.0E-93 T 25-04-2016 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 Pfam PF00347 Ribosomal protein L6 14 79 1.8E-11 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 Pfam PF00347 Ribosomal protein L6 87 161 1.0E-19 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 PIRSF PIRSF002162 4 174 1.7E-39 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 173 35.068 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 PANTHER PTHR11655 1 174 3.5E-76 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 SUPERFAMILY SSF56053 80 173 6.04E-36 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 PANTHER PTHR11655:SF14 1 174 3.5E-76 T 25-04-2016 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 SUPERFAMILY SSF56053 1 79 1.44E-14 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 Gene3D G3DSA:3.90.930.12 2 79 4.9E-17 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 PRINTS PR00059 Ribosomal protein L6 signature 138 159 3.0E-34 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 PRINTS PR00059 Ribosomal protein L6 signature 68 93 3.0E-34 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 PRINTS PR00059 Ribosomal protein L6 signature 96 112 3.0E-34 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 173 8.8E-67 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 Gene3D G3DSA:3.90.930.12 80 173 9.5E-41 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMD_RS04245 660a867809fb67fcbbe622869947c027 174 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 151 159 - T 25-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 Gene3D G3DSA:1.10.10.60 266 312 4.1E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 SUPERFAMILY SSF46689 264 312 1.94E-9 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 PANTHER PTHR11019:SF61 37 310 3.0E-29 T 25-04-2016 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 SUPERFAMILY SSF46689 210 261 3.31E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 Gene3D G3DSA:1.10.10.60 209 265 3.5E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 SMART SM00342 227 310 9.7E-25 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 Pfam PF12833 Helix-turn-helix domain 233 311 8.6E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS13350 e241fc7485affe6e4f0cb9b9640cc021 317 PANTHER PTHR11019 37 310 3.0E-29 T 25-04-2016 SMD_RS17545 534b970dcbcb94c8e56814dc88a941d6 264 Gene3D G3DSA:3.20.20.70 10 260 3.4E-57 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS17545 534b970dcbcb94c8e56814dc88a941d6 264 SUPERFAMILY SSF110399 8 250 8.24E-90 T 25-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SMD_RS17545 534b970dcbcb94c8e56814dc88a941d6 264 PANTHER PTHR34266 4 263 6.2E-157 T 25-04-2016 SMD_RS17545 534b970dcbcb94c8e56814dc88a941d6 264 PANTHER PTHR34266:SF2 4 263 6.2E-157 T 25-04-2016 SMD_RS17545 534b970dcbcb94c8e56814dc88a941d6 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 2.9E-112 T 25-04-2016 SMD_RS17545 534b970dcbcb94c8e56814dc88a941d6 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 43.113 T 25-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 SUPERFAMILY SSF100950 5 190 1.53E-47 T 25-04-2016 SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 Gene3D G3DSA:3.40.50.10420 5 188 1.8E-45 T 25-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 PANTHER PTHR23407 1 188 1.7E-45 T 25-04-2016 SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 184 4.8E-46 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 PANTHER PTHR23407:SF1 1 188 1.7E-45 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 PIRSF PIRSF006806 1 187 7.4E-29 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMD_RS17990 e115e21a62cad52716a0a4139c76f74d 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 184 2.2E-29 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMD_RS05260 bbf07b8e96db986309a185a941b37dfa 215 SUPERFAMILY SSF141571 25 213 4.12E-37 T 25-04-2016 SMD_RS05260 bbf07b8e96db986309a185a941b37dfa 215 PANTHER PTHR14136 53 198 1.6E-15 T 25-04-2016 SMD_RS05260 bbf07b8e96db986309a185a941b37dfa 215 Pfam PF13599 Pentapeptide repeats (9 copies) 95 172 1.2E-16 T 25-04-2016 IPR001646 Pentapeptide repeat SMD_RS05260 bbf07b8e96db986309a185a941b37dfa 215 Pfam PF13576 Pentapeptide repeats (9 copies) 26 70 1.5E-6 T 25-04-2016 IPR001646 Pentapeptide repeat SMD_RS09375 ab499a1ed996acd512f0e0b22e237036 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 5.0E-7 T 25-04-2016 SMD_RS09375 ab499a1ed996acd512f0e0b22e237036 153 Pfam PF04191 Phospholipid methyltransferase 40 140 1.8E-12 T 25-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 SMD_RS09375 ab499a1ed996acd512f0e0b22e237036 153 PANTHER PTHR12714 3 153 3.6E-20 T 25-04-2016 SMD_RS09740 5cfa312714bb5e1e9d3240b889c1b798 292 Pfam PF00483 Nucleotidyl transferase 12 268 4.3E-31 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMD_RS09740 5cfa312714bb5e1e9d3240b889c1b798 292 PANTHER PTHR22572 7 272 1.5E-98 T 25-04-2016 SMD_RS09740 5cfa312714bb5e1e9d3240b889c1b798 292 SUPERFAMILY SSF53448 5 276 1.67E-63 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS09740 5cfa312714bb5e1e9d3240b889c1b798 292 Gene3D G3DSA:3.90.550.10 6 277 2.6E-68 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS09740 5cfa312714bb5e1e9d3240b889c1b798 292 PANTHER PTHR22572:SF14 7 272 1.5E-98 T 25-04-2016 SMD_RS09740 5cfa312714bb5e1e9d3240b889c1b798 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 2.6E-108 T 25-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 SMART SM01232 114 194 8.7E-11 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 93 1.5E-9 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 Gene3D G3DSA:1.10.8.50 114 239 4.2E-24 T 25-04-2016 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 SMART SM00898 2 97 1.5E-9 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 PANTHER PTHR22993 1 242 1.0E-33 T 25-04-2016 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 Gene3D G3DSA:3.20.190.10 2 93 9.4E-11 T 25-04-2016 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 SUPERFAMILY SSF81624 2 99 4.58E-14 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 SUPERFAMILY SSF46946 114 213 6.92E-19 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMD_RS11585 b593c2d03f5fb8622e7a67ea7f34a74a 244 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 137 186 2.0E-12 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Pfam PF00310 Glutamine amidotransferases class-II 19 431 5.5E-151 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Pfam PF01493 GXGXG motif 1241 1424 1.4E-75 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Gene3D G3DSA:3.60.20.10 19 440 4.5E-145 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 SUPERFAMILY SSF69336 1215 1470 2.88E-86 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Gene3D G3DSA:2.160.20.60 1218 1470 3.5E-91 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 SUPERFAMILY SSF56235 19 434 4.14E-128 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Gene3D G3DSA:3.20.20.70 446 784 1.4E-89 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 PANTHER PTHR11938:SF1 8 1478 0.0 T 25-04-2016 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Gene3D G3DSA:3.20.20.70 822 1182 6.9E-163 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Pfam PF04898 Glutamate synthase central domain 463 744 4.7E-99 T 25-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 PANTHER PTHR11938 8 1478 0.0 T 25-04-2016 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 SUPERFAMILY SSF51395 450 1195 7.79E-247 T 25-04-2016 SMD_RS00455 d15b02bc55ddb33b821f8fb10536b8fe 1484 Pfam PF01645 Conserved region in glutamate synthase 800 1163 7.1E-148 T 25-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMD_RS09025 6ecb9a8ecae166f2774a52c4163f5c4a 159 PIRSF PIRSF000239 8 159 1.2E-24 T 25-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SMD_RS09025 6ecb9a8ecae166f2774a52c4163f5c4a 159 SUPERFAMILY SSF52833 20 157 9.31E-45 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS09025 6ecb9a8ecae166f2774a52c4163f5c4a 159 PANTHER PTHR10681 25 157 2.9E-39 T 25-04-2016 SMD_RS09025 6ecb9a8ecae166f2774a52c4163f5c4a 159 Gene3D G3DSA:3.40.30.10 21 157 1.4E-42 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS09025 6ecb9a8ecae166f2774a52c4163f5c4a 159 Pfam PF00578 AhpC/TSA family 19 135 2.3E-29 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.7E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.7E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 PANTHER PTHR30055 1 151 2.8E-31 T 25-04-2016 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 SUPERFAMILY SSF46689 9 77 2.77E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 9.1E-12 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 PANTHER PTHR30055:SF71 1 151 2.8E-31 T 25-04-2016 SMD_RS19885 514f745bc6aac62021159622784bc4a5 197 Gene3D G3DSA:1.10.357.10 2 156 8.8E-22 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 SUPERFAMILY SSF103473 21 409 4.05E-63 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 Pfam PF07690 Major Facilitator Superfamily 38 340 3.2E-33 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 PANTHER PTHR23501:SF11 24 411 1.4E-134 T 25-04-2016 SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 PANTHER PTHR23501 24 411 1.4E-134 T 25-04-2016 SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 88 104 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 Gene3D G3DSA:1.20.1250.20 237 413 3.0E-12 T 25-04-2016 SMD_RS01185 20e71e96ae7856d8e845c2990e04c414 418 Gene3D G3DSA:1.20.1250.20 32 218 3.5E-33 T 25-04-2016 SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 8 454 1.1E-200 T 25-04-2016 IPR010252 Formiminoglutamate deiminase SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 Gene3D G3DSA:3.20.20.140 59 398 9.3E-69 T 25-04-2016 SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 PANTHER PTHR11271:SF4 21 456 1.1E-178 T 25-04-2016 IPR010252 Formiminoglutamate deiminase SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 SUPERFAMILY SSF51556 55 378 5.83E-71 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 PANTHER PTHR11271 21 456 1.1E-178 T 25-04-2016 SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 SUPERFAMILY SSF51338 352 438 1.64E-7 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS14045 b5d1a8800f0ff1281f28be3ea69cedef 456 Pfam PF01979 Amidohydrolase family 52 430 6.7E-28 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 PANTHER PTHR11699 1 509 4.3E-297 T 25-04-2016 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 SUPERFAMILY SSF53720 19 498 1.19E-133 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 Pfam PF00171 Aldehyde dehydrogenase family 25 491 6.9E-130 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 Gene3D G3DSA:3.40.309.10 279 457 3.9E-54 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 Gene3D G3DSA:3.40.605.10 21 278 2.8E-72 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS10125 54f6707715207e977ca0445b56c18797 510 PANTHER PTHR11699:SF144 1 509 4.3E-297 T 25-04-2016 SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 3 321 5.5E-73 T 25-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 PANTHER PTHR37689:SF1 1 327 1.3E-50 T 25-04-2016 SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 Pfam PF04216 Protein involved in formate dehydrogenase formation 18 322 4.0E-97 T 25-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 PANTHER PTHR37689 1 327 1.3E-50 T 25-04-2016 SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 PIRSF PIRSF018296 1 327 2.1E-85 T 25-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 Gene3D G3DSA:3.90.1670.10 22 324 1.2E-83 T 25-04-2016 IPR024064 FdhE-like SMD_RS17905 176c001536327f400e11eb9b2557efb1 327 SUPERFAMILY SSF144020 23 323 1.19E-71 T 25-04-2016 IPR024064 FdhE-like SMD_RS18565 1d8fc417af035aa377ddd2db2bb81021 138 Gene3D G3DSA:3.10.180.10 10 127 6.8E-22 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS18565 1d8fc417af035aa377ddd2db2bb81021 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 124 2.3E-5 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS18565 1d8fc417af035aa377ddd2db2bb81021 138 SUPERFAMILY SSF54593 10 129 1.06E-23 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19065 9bee651969ebe79ba54f6d021732b49c 142 PANTHER PTHR35006 9 138 1.2E-36 T 25-04-2016 SMD_RS19065 9bee651969ebe79ba54f6d021732b49c 142 Gene3D G3DSA:3.10.180.10 2 128 3.4E-31 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19065 9bee651969ebe79ba54f6d021732b49c 142 SUPERFAMILY SSF54593 12 130 4.3E-24 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19065 9bee651969ebe79ba54f6d021732b49c 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 125 2.6E-12 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS17100 0a7fa6625082cb3012a9a6fe67f64b03 114 Pfam PF04606 Ogr/Delta-like zinc finger 12 53 4.6E-7 T 25-04-2016 IPR007684 Zinc finger, Ogr/Delta-type SMD_RS06750 f66e8505aa1fd01cc8eace41ee73735c 416 PANTHER PTHR10151 26 416 9.3E-152 T 25-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family SMD_RS06750 f66e8505aa1fd01cc8eace41ee73735c 416 Gene3D G3DSA:3.40.720.10 8 323 3.5E-82 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMD_RS06750 f66e8505aa1fd01cc8eace41ee73735c 416 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 41 358 5.4E-84 T 25-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 SMD_RS06750 f66e8505aa1fd01cc8eace41ee73735c 416 SUPERFAMILY SSF53649 28 397 4.07E-96 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 Gene3D G3DSA:2.40.170.20 173 235 2.7E-101 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 Gene3D G3DSA:2.40.170.20 288 339 2.7E-101 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 Gene3D G3DSA:2.40.170.20 374 875 2.7E-101 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 PANTHER PTHR30069 7 803 7.2E-116 T 25-04-2016 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 SUPERFAMILY SSF56935 391 875 3.37E-106 T 25-04-2016 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 SUPERFAMILY SSF56935 39 237 3.37E-106 T 25-04-2016 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 SUPERFAMILY SSF56935 306 354 3.37E-106 T 25-04-2016 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 Pfam PF00593 TonB dependent receptor 570 874 5.3E-35 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 Gene3D G3DSA:2.170.130.10 54 172 5.9E-34 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 PANTHER PTHR30069:SF7 7 803 7.2E-116 T 25-04-2016 SMD_RS13050 b200b3776e1ff0cef695858fcd95c2b4 875 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 169 3.1E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS07715 c1f2b0bf5432d5510882fbc4596ce30a 411 Pfam PF02321 Outer membrane efflux protein 238 409 2.8E-9 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS07715 c1f2b0bf5432d5510882fbc4596ce30a 411 Pfam PF02321 Outer membrane efflux protein 30 213 5.1E-12 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS07715 c1f2b0bf5432d5510882fbc4596ce30a 411 Gene3D G3DSA:1.20.1600.10 24 398 1.5E-23 T 25-04-2016 SMD_RS07715 c1f2b0bf5432d5510882fbc4596ce30a 411 SUPERFAMILY SSF56954 2 407 1.7E-41 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 690 7.8E-61 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 SMART SM00283 444 691 2.1E-92 T 25-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 PANTHER PTHR32089:SF63 159 244 1.1E-147 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 PANTHER PTHR32089:SF63 426 694 1.1E-147 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 Gene3D G3DSA:1.10.287.950 459 663 7.9E-60 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 PANTHER PTHR32089 159 244 1.1E-147 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 PANTHER PTHR32089 426 694 1.1E-147 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 SUPERFAMILY SSF158472 210 260 1.57E-8 T 25-04-2016 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 Pfam PF00672 HAMP domain 192 258 1.7E-14 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 SMART SM00304 210 262 9.1E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 SMART SM00304 391 443 13.0 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS21185 3648bef69c7e2461e25e2300f58f4d18 706 SUPERFAMILY SSF58104 414 692 5.36E-69 T 25-04-2016 SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 PANTHER PTHR22835:SF222 8 438 1.1E-70 T 25-04-2016 SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 SUPERFAMILY SSF52266 32 244 3.05E-19 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 SUPERFAMILY SSF52266 283 312 3.05E-19 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 Pfam PF03797 Autotransporter beta-domain 348 600 1.1E-37 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 Gene3D G3DSA:3.40.50.1110 18 313 1.1E-69 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 SUPERFAMILY SSF103515 342 586 1.96E-30 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 33 44 - T 25-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 PANTHER PTHR22835 8 438 1.1E-70 T 25-04-2016 SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 Gene3D G3DSA:2.40.128.130 341 612 3.5E-39 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 SMART SM00869 346 607 1.5E-28 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 PIRSF PIRSF037375 3 617 1.7E-168 T 25-04-2016 IPR017186 Lipase, autotransporter EstA SMD_RS17535 b882c8caa4d883637000a81d517823bf 617 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 35 302 3.3E-10 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 PANTHER PTHR30097:SF4 30 401 1.8E-46 T 25-04-2016 SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 SUPERFAMILY SSF111369 97 242 7.85E-16 T 25-04-2016 SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 PANTHER PTHR30097 30 401 1.8E-46 T 25-04-2016 SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 94 286 1.0E-12 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 Gene3D G3DSA:2.40.50.100 109 141 3.8E-13 T 25-04-2016 SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 Gene3D G3DSA:2.40.50.100 214 245 3.8E-13 T 25-04-2016 SMD_RS21485 eb3c9600c6d648db2ca044e8ffcbd4df 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 84 389 3.8E-35 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 Gene3D G3DSA:3.10.50.30 85 165 8.2E-27 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 164 28.788 T 25-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 2.6E-25 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 PANTHER PTHR30437:SF6 1 167 3.9E-88 T 25-04-2016 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 SUPERFAMILY SSF46557 13 87 8.89E-25 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 Gene3D G3DSA:1.10.287.180 12 84 5.3E-25 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 166 1.3E-61 T 25-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 PANTHER PTHR30437 1 167 3.9E-88 T 25-04-2016 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 SUPERFAMILY SSF54534 93 165 2.09E-21 T 25-04-2016 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 166 50.272 T 25-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 PIRSF PIRSF006092 8 167 1.2E-50 T 25-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SMD_RS15640 f852b94cd81110ef38a9e611c1d79bb0 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 94 165 4.5E-25 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 SUPERFAMILY SSF52540 42 353 3.61E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Gene3D G3DSA:1.10.260.30 328 432 8.1E-38 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 295 3.4E-72 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 33.64 T 25-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.5E-20 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 SMART SM00962 100 296 4.3E-113 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 SUPERFAMILY SSF47446 328 431 9.32E-35 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Pfam PF02978 Signal peptide binding domain 328 428 1.3E-31 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 3.0E-175 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Gene3D G3DSA:1.20.120.140 2 89 1.5E-32 T 25-04-2016 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 Gene3D G3DSA:3.40.50.300 94 297 1.0E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 PANTHER PTHR11564:SF7 1 436 2.7E-254 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 SMART SM00963 1 86 1.1E-34 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 SMART SM00382 99 301 2.9E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS06405 8a425ae9bf952c19f55c3fa1537aed41 458 PANTHER PTHR11564 1 436 2.7E-254 T 25-04-2016 SMD_RS21535 1444ee46993a5b9da57cb81b1e2b96a4 199 SUPERFAMILY SSF56214 87 197 9.59E-26 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMD_RS21535 1444ee46993a5b9da57cb81b1e2b96a4 199 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 185 5.0E-19 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMD_RS21535 1444ee46993a5b9da57cb81b1e2b96a4 199 SUPERFAMILY SSF56214 32 79 1.27E-5 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMD_RS21535 1444ee46993a5b9da57cb81b1e2b96a4 199 PANTHER PTHR12215 34 170 2.3E-25 T 25-04-2016 SMD_RS21535 1444ee46993a5b9da57cb81b1e2b96a4 199 Gene3D G3DSA:3.90.470.20 34 99 1.8E-10 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMD_RS21535 1444ee46993a5b9da57cb81b1e2b96a4 199 Gene3D G3DSA:3.90.470.20 100 196 2.1E-22 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMD_RS02290 8679d47da5463d6565c32a900296c1d7 186 Gene3D G3DSA:1.10.10.10 21 115 8.9E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02290 8679d47da5463d6565c32a900296c1d7 186 SUPERFAMILY SSF46785 18 111 2.86E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02290 8679d47da5463d6565c32a900296c1d7 186 PANTHER PTHR33169:SF11 17 123 5.4E-24 T 25-04-2016 SMD_RS02290 8679d47da5463d6565c32a900296c1d7 186 PANTHER PTHR33169 17 123 5.4E-24 T 25-04-2016 SMD_RS02290 8679d47da5463d6565c32a900296c1d7 186 Pfam PF03551 Transcriptional regulator PadR-like family 35 103 5.7E-16 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal SMD_RS16475 cf2d84f5573e434448c958109096730d 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 7.5E-10 T 25-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PRINTS PR00045 Sigma-54 factor signature 182 199 5.5E-26 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PRINTS PR00045 Sigma-54 factor signature 446 464 5.5E-26 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PRINTS PR00045 Sigma-54 factor signature 388 399 5.5E-26 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PRINTS PR00045 Sigma-54 factor signature 372 384 5.5E-26 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 451 458 - T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PANTHER PTHR32248 1 473 8.6E-150 T 25-04-2016 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 Pfam PF04552 Sigma-54, DNA binding domain 314 471 1.1E-62 T 25-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 360 379 - T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 Pfam PF04963 Sigma-54 factor, core binding domain 107 300 5.2E-49 T 25-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PIRSF PIRSF000774 1 473 7.8E-131 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 8.4E-17 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 PANTHER PTHR32248:SF4 1 473 8.6E-150 T 25-04-2016 SMD_RS05445 bde01db8f9a60619cf9478fdc2c092fd 473 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 469 1.4E-140 T 25-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 SUPERFAMILY SSF51679 1 318 7.51E-51 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 PANTHER PTHR30011:SF27 3 318 7.1E-67 T 25-04-2016 SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 Gene3D G3DSA:3.20.20.30 1 320 9.5E-61 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 PANTHER PTHR30011 3 318 7.1E-67 T 25-04-2016 SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 Pfam PF00296 Luciferase-like monooxygenase 3 291 1.6E-43 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 3 318 4.8E-82 T 25-04-2016 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related SMD_RS12120 280c2f8391408862a2983cf8a207b93c 328 TIGRFAM TIGR03885 flavin_revert: probable non-F420 flavinoid oxidoreductase 3 317 1.8E-150 T 25-04-2016 IPR023907 Non-F420 flavinoid oxidoreductase SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 4.8E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 4.8E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 4.8E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 4.8E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 Pfam PF12802 MarR family 48 106 1.6E-11 T 25-04-2016 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 SMART SM00347 42 142 5.8E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 Gene3D G3DSA:1.10.10.10 16 153 7.3E-35 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 PANTHER PTHR35790 10 164 2.6E-28 T 25-04-2016 SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 SUPERFAMILY SSF46785 16 153 4.48E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20370 c5fae1aab98c68d3a1f4a09db5b0bdc0 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 115 - T 25-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 Gene3D G3DSA:2.40.170.20 169 749 9.8E-113 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 PANTHER PTHR30069 339 644 5.4E-214 T 25-04-2016 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 PANTHER PTHR30069 11 278 5.4E-214 T 25-04-2016 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 Pfam PF00593 TonB dependent receptor 464 747 4.6E-35 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 SUPERFAMILY SSF56935 35 749 3.14E-127 T 25-04-2016 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 166 3.0E-28 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 732 749 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 PANTHER PTHR30069:SF5 339 644 5.4E-214 T 25-04-2016 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 PANTHER PTHR30069:SF5 11 278 5.4E-214 T 25-04-2016 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 Gene3D G3DSA:2.170.130.10 50 168 1.4E-38 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06635 09ef879cfea93fd34659e6a2437d7854 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 749 7.5E-73 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 210 224 2.5E-6 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 99 107 2.5E-6 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 130 141 2.5E-6 T 25-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 Gene3D G3DSA:3.40.50.1820 368 466 1.3E-51 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 Gene3D G3DSA:3.40.50.1820 61 146 1.3E-51 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 Gene3D G3DSA:3.40.50.1820 184 295 1.3E-51 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 Pfam PF00561 alpha/beta hydrolase fold 98 462 9.2E-20 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 SUPERFAMILY SSF53474 80 147 1.01E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 SUPERFAMILY SSF53474 321 464 1.01E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 SUPERFAMILY SSF53474 186 240 1.01E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PANTHER PTHR10992:SF874 183 284 1.3E-104 T 25-04-2016 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PANTHER PTHR10992:SF874 77 145 1.3E-104 T 25-04-2016 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PANTHER PTHR10992:SF874 366 482 1.3E-104 T 25-04-2016 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PANTHER PTHR10992 183 284 1.3E-104 T 25-04-2016 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PANTHER PTHR10992 77 145 1.3E-104 T 25-04-2016 SMD_RS21080 00ee6e563cb20bf40b0f182d0cc6db3d 508 PANTHER PTHR10992 366 482 1.3E-104 T 25-04-2016 SMD_RS10110 452216e1eba4bd807f36cde8ff65dffc 256 PANTHER PTHR10108:SF849 8 184 1.3E-56 T 25-04-2016 SMD_RS10110 452216e1eba4bd807f36cde8ff65dffc 256 Pfam PF08241 Methyltransferase domain 46 138 1.1E-14 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS10110 452216e1eba4bd807f36cde8ff65dffc 256 Gene3D G3DSA:3.40.50.150 21 183 3.8E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS10110 452216e1eba4bd807f36cde8ff65dffc 256 PANTHER PTHR10108 8 184 1.3E-56 T 25-04-2016 SMD_RS10110 452216e1eba4bd807f36cde8ff65dffc 256 SUPERFAMILY SSF53335 13 188 9.85E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS17660 15764f04c075e6051715f41f141c21b2 217 PANTHER PTHR18901:SF23 1 216 2.1E-74 T 25-04-2016 SMD_RS17660 15764f04c075e6051715f41f141c21b2 217 PANTHER PTHR18901 1 216 2.1E-74 T 25-04-2016 SMD_RS17660 15764f04c075e6051715f41f141c21b2 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 187 3.0E-31 T 25-04-2016 IPR023214 HAD-like domain SMD_RS17660 15764f04c075e6051715f41f141c21b2 217 Gene3D G3DSA:1.10.150.240 21 78 2.7E-20 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMD_RS17660 15764f04c075e6051715f41f141c21b2 217 SUPERFAMILY SSF56784 8 216 2.16E-47 T 25-04-2016 IPR023214 HAD-like domain SMD_RS17660 15764f04c075e6051715f41f141c21b2 217 Gene3D G3DSA:3.40.50.1000 79 216 9.0E-41 T 25-04-2016 IPR023214 HAD-like domain SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 14 231 3.3E-88 T 25-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 Pfam PF13489 Methyltransferase domain 52 206 7.1E-29 T 25-04-2016 SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 SUPERFAMILY SSF53335 16 232 1.07E-52 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 12 237 39.409 T 25-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 Gene3D G3DSA:3.40.50.150 25 221 6.3E-51 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 PANTHER PTHR10108:SF910 1 231 1.1E-92 T 25-04-2016 SMD_RS15010 dea7734b319cabaf2230e7ece9769397 238 PANTHER PTHR10108 1 231 1.1E-92 T 25-04-2016 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 141 2.0E-40 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 Pfam PF01220 Dehydroquinase class II 3 140 2.5E-57 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 PIRSF PIRSF001399 1 147 3.4E-55 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 SUPERFAMILY SSF52304 3 143 1.02E-58 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 71.329 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 25-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 PANTHER PTHR21272 1 149 4.1E-81 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 140 1.9E-53 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS19910 6a60dc3759df30c861c7d6a7fb9a7927 149 Gene3D G3DSA:3.40.50.9100 3 145 2.5E-63 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS17245 f6a55d067ec457f2006dbfdca1563d9e 173 PANTHER PTHR23091 1 168 1.2E-48 T 25-04-2016 SMD_RS17245 f6a55d067ec457f2006dbfdca1563d9e 173 PANTHER PTHR23091:SF258 1 168 1.2E-48 T 25-04-2016 SMD_RS17245 f6a55d067ec457f2006dbfdca1563d9e 173 Gene3D G3DSA:3.40.630.30 1 160 2.0E-36 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS17245 f6a55d067ec457f2006dbfdca1563d9e 173 SUPERFAMILY SSF55729 1 159 3.77E-33 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS17245 f6a55d067ec457f2006dbfdca1563d9e 173 Pfam PF00583 Acetyltransferase (GNAT) family 64 147 7.4E-12 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82693 40 135 7.85E-19 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:3.30.70.1430 41 140 3.6E-21 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82714 694 777 1.44E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 3.0E-35 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 3.0E-35 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.0E-35 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.0E-35 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 3.0E-35 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.0E-35 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:3.30.2090.10 694 778 8.0E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:3.30.2090.10 184 261 1.2E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82866 776 1004 5.75E-46 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:3.30.70.1320 147 178 1.8E-9 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:3.30.70.1320 266 293 1.8E-9 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82866 295 487 7.98E-31 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Pfam PF00873 AcrB/AcrD/AcrF family 4 1001 1.0E-203 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82693 145 181 2.3E-10 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82693 264 306 2.3E-10 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 SUPERFAMILY SSF82714 183 260 8.89E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PANTHER PTHR32063 1 1023 3.2E-288 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:1.20.1640.10 294 491 4.3E-40 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 PANTHER PTHR32063:SF0 1 1023 3.2E-288 T 25-04-2016 SMD_RS09670 7bbadd4170db214ba8b1caa12a025934 1028 Gene3D G3DSA:1.10.3850.10 784 1002 1.6E-52 T 25-04-2016 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 260 271 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 Gene3D G3DSA:3.40.605.10 9 247 8.2E-69 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 Gene3D G3DSA:3.40.309.10 248 432 3.6E-61 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 Pfam PF00171 Aldehyde dehydrogenase family 7 456 1.3E-136 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 PANTHER PTHR11699:SF28 10 460 8.3E-223 T 25-04-2016 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 PANTHER PTHR11699 10 460 8.3E-223 T 25-04-2016 SMD_RS10580 223ef4dce8dd8df1d3f5073662e36143 461 SUPERFAMILY SSF53720 7 459 1.23E-139 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS06140 3116b46bc8928f4b7096fd16da5cfd16 357 SUPERFAMILY SSF55961 26 178 1.81E-12 T 25-04-2016 SMD_RS06140 3116b46bc8928f4b7096fd16da5cfd16 357 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 29 175 1.5E-9 T 25-04-2016 IPR019587 Polyketide cyclase/dehydrase SMD_RS06140 3116b46bc8928f4b7096fd16da5cfd16 357 Gene3D G3DSA:3.30.530.20 29 138 3.3E-5 T 25-04-2016 IPR023393 START-like domain SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 PANTHER PTHR24221 4 590 1.7E-236 T 25-04-2016 SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 SUPERFAMILY SSF90123 21 336 2.49E-72 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 Gene3D G3DSA:1.20.1560.10 22 330 1.5E-73 T 25-04-2016 SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 SMART SM00382 377 563 2.0E-20 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 SUPERFAMILY SSF52540 340 588 2.15E-90 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 Pfam PF00005 ABC transporter 368 517 2.9E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 Gene3D G3DSA:3.40.50.300 350 581 1.9E-86 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 Pfam PF00664 ABC transporter transmembrane region 36 297 2.8E-48 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS09520 7884d2d957f4f7841eefb1e6e777fce3 590 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 16 588 3.4E-269 T 25-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein SMD_RS14840 21190a5d03542d35c4af1a3a67184dc1 329 Gene3D G3DSA:1.25.40.10 69 123 2.9E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS14840 21190a5d03542d35c4af1a3a67184dc1 329 Gene3D G3DSA:1.25.40.10 124 205 6.1E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS14840 21190a5d03542d35c4af1a3a67184dc1 329 SUPERFAMILY SSF48452 70 181 1.22E-12 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02575 2db1589216cccbfb4114165d9ef93352 404 SUPERFAMILY SSF103473 11 392 1.24E-31 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS02575 2db1589216cccbfb4114165d9ef93352 404 Gene3D G3DSA:1.20.1250.20 28 193 4.5E-7 T 25-04-2016 SMD_RS02575 2db1589216cccbfb4114165d9ef93352 404 Gene3D G3DSA:1.20.1250.20 211 391 1.1E-15 T 25-04-2016 SMD_RS02575 2db1589216cccbfb4114165d9ef93352 404 PANTHER PTHR23542 2 391 4.7E-104 T 25-04-2016 SMD_RS02575 2db1589216cccbfb4114165d9ef93352 404 Pfam PF07690 Major Facilitator Superfamily 31 228 2.2E-14 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS02575 2db1589216cccbfb4114165d9ef93352 404 PANTHER PTHR23542:SF1 2 391 4.7E-104 T 25-04-2016 SMD_RS03495 96fc9f55875d2c77cba079b4613b49f9 149 Pfam PF05258 Protein of unknown function (DUF721) 26 93 1.2E-9 T 25-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 SMD_RS08500 1b385d923d134c96480259635813ea6d 163 ProDom PD033200 ENDOPEPTIDASE GENE LYSIS PROBABLE PHAGE PROTEASE 3.4.-.- HYDROLASE BACTERIOPHAGE CELL 55 152 2.0E-4 T 25-04-2016 IPR016417 Bacteriophage lysis endopeptidase, predicted SMD_RS16810 3b1e2799a85f749184be747a1ae4fddc 178 SUPERFAMILY SSF48452 68 165 1.06E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS16810 3b1e2799a85f749184be747a1ae4fddc 178 Gene3D G3DSA:1.25.40.10 76 162 7.9E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02985 0f39e963fe9b150a310acb72ed18add8 295 PANTHER PTHR22572 5 270 1.3E-166 T 25-04-2016 SMD_RS02985 0f39e963fe9b150a310acb72ed18add8 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 4.1E-155 T 25-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMD_RS02985 0f39e963fe9b150a310acb72ed18add8 295 SUPERFAMILY SSF53448 4 288 1.01E-91 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS02985 0f39e963fe9b150a310acb72ed18add8 295 PANTHER PTHR22572:SF105 5 270 1.3E-166 T 25-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMD_RS02985 0f39e963fe9b150a310acb72ed18add8 295 Gene3D G3DSA:3.90.550.10 4 267 1.2E-68 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS02985 0f39e963fe9b150a310acb72ed18add8 295 Pfam PF00483 Nucleotidyl transferase 5 241 1.1E-72 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMD_RS04190 346a13d222056d035062f97551298c61 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 25-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SMD_RS04190 346a13d222056d035062f97551298c61 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 2.6E-42 T 25-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMD_RS04190 346a13d222056d035062f97551298c61 89 PIRSF PIRSF002144 1 89 6.5E-32 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 SUPERFAMILY SSF54570 3 82 6.8E-34 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 25.286 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 2.5E-22 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 2.5E-22 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 2.5E-22 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 Gene3D G3DSA:3.30.860.10 1 87 1.6E-39 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 PANTHER PTHR11880 1 86 2.4E-49 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS04190 346a13d222056d035062f97551298c61 89 Pfam PF00203 Ribosomal protein S19 3 81 1.4E-36 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 Pfam PF00717 Peptidase S24-like 69 157 2.7E-19 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 133 145 5.1E-23 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 205 224 5.1E-23 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 5.1E-23 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 ProSitePatterns PS00760 Signal peptidases I lysine active site. 135 147 - T 25-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 PANTHER PTHR12383 1 243 3.7E-92 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 ProSitePatterns PS00761 Signal peptidases I signature 3. 210 223 - T 25-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 244 1.1E-44 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 PANTHER PTHR12383:SF27 1 243 3.7E-92 T 25-04-2016 SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 Gene3D G3DSA:2.10.109.10 205 247 2.4E-48 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 Gene3D G3DSA:2.10.109.10 59 143 2.4E-48 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS16235 a9575c1325eb5aee9c8be2114cc5c25d 264 SUPERFAMILY SSF51306 61 248 9.16E-59 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMD_RS01650 e29ce967b537bef63d7363265e9bc60c 301 PANTHER PTHR32322 6 299 2.7E-106 T 25-04-2016 SMD_RS01650 e29ce967b537bef63d7363265e9bc60c 301 Pfam PF00892 EamA-like transporter family 160 294 6.3E-21 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS01650 e29ce967b537bef63d7363265e9bc60c 301 Pfam PF00892 EamA-like transporter family 18 150 4.6E-14 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS01650 e29ce967b537bef63d7363265e9bc60c 301 PANTHER PTHR32322:SF8 6 299 2.7E-106 T 25-04-2016 SMD_RS01650 e29ce967b537bef63d7363265e9bc60c 301 SUPERFAMILY SSF103481 53 153 1.83E-11 T 25-04-2016 SMD_RS01650 e29ce967b537bef63d7363265e9bc60c 301 SUPERFAMILY SSF103481 197 298 8.76E-16 T 25-04-2016 SMD_RS02505 5bdcb5aab88957f0e5b4d545ad64ca78 136 Gene3D G3DSA:3.10.180.10 5 132 2.6E-25 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS02505 5bdcb5aab88957f0e5b4d545ad64ca78 136 PANTHER PTHR36503 5 132 8.0E-55 T 25-04-2016 SMD_RS02505 5bdcb5aab88957f0e5b4d545ad64ca78 136 PANTHER PTHR36503:SF2 5 132 8.0E-55 T 25-04-2016 SMD_RS02505 5bdcb5aab88957f0e5b4d545ad64ca78 136 SUPERFAMILY SSF54593 6 131 2.6E-20 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS02250 c83ed024157ee2bd681193e47c9e0388 283 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 58 258 1.3E-72 T 25-04-2016 IPR014547 Uncharacterised conserved protein UCP028477 SMD_RS02250 c83ed024157ee2bd681193e47c9e0388 283 PIRSF PIRSF028477 3 283 9.6E-103 T 25-04-2016 IPR014547 Uncharacterised conserved protein UCP028477 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 44 59 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 284 297 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 128 142 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 503 519 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 79 92 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 436 450 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 751 767 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 541 553 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR00418 DNA topoisomerase II family signature 521 538 6.1E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 11 819 98.05 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 SMART SM00433 44 812 8.2E-258 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 187 2.3E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 236 258 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 772 784 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 14 24 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 486 495 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 196 211 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 328 344 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 211 224 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 376 390 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 788 804 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PRINTS PR01159 DNA gyrase subunit B signature 390 410 8.4E-74 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Pfam PF00204 DNA gyrase B 237 406 5.6E-59 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 14 819 1.9E-294 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Gene3D G3DSA:3.30.230.10 236 408 6.0E-74 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 ProSitePatterns PS00177 DNA topoisomerase II signature. 438 446 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PANTHER PTHR10169 739 819 2.3E-304 T 25-04-2016 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 PANTHER PTHR10169 1 569 2.3E-304 T 25-04-2016 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 SUPERFAMILY SSF54211 237 407 2.28E-58 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Gene3D G3DSA:3.30.565.10 14 228 1.6E-86 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Pfam PF01751 Toprim domain 435 542 1.1E-17 T 25-04-2016 IPR006171 Toprim domain SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Gene3D G3DSA:3.40.50.670 420 566 9.2E-98 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Gene3D G3DSA:3.40.50.670 733 801 9.2E-98 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 SMART SM00387 40 190 2.8E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 SUPERFAMILY SSF56719 410 576 5.23E-84 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 SUPERFAMILY SSF56719 745 810 5.23E-84 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 748 808 2.1E-29 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMD_RS00130 3ed43e45e6ec8d2bbf7782955ba8c6e9 819 SUPERFAMILY SSF55874 13 234 9.56E-67 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS09260 7d4ca3fbb347d7fbd2a02d77ed7e4817 159 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 156 7.0E-32 T 25-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 SMD_RS09260 7d4ca3fbb347d7fbd2a02d77ed7e4817 159 SUPERFAMILY SSF55961 8 158 6.25E-48 T 25-04-2016 SMD_RS09260 7d4ca3fbb347d7fbd2a02d77ed7e4817 159 Gene3D G3DSA:3.30.530.20 8 157 5.0E-52 T 25-04-2016 IPR023393 START-like domain SMD_RS09260 7d4ca3fbb347d7fbd2a02d77ed7e4817 159 PANTHER PTHR36929:SF1 10 159 4.4E-32 T 25-04-2016 SMD_RS09260 7d4ca3fbb347d7fbd2a02d77ed7e4817 159 PANTHER PTHR36929 10 159 4.4E-32 T 25-04-2016 SMD_RS09690 cd0ee5ca16849fe76e05994a88bae50f 345 PANTHER PTHR31377 1 345 1.6E-119 T 25-04-2016 SMD_RS09690 cd0ee5ca16849fe76e05994a88bae50f 345 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 339 1.5E-105 T 25-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SMD_RS09690 cd0ee5ca16849fe76e05994a88bae50f 345 Gene3D G3DSA:3.75.10.10 2 342 7.3E-121 T 25-04-2016 SMD_RS09690 cd0ee5ca16849fe76e05994a88bae50f 345 SUPERFAMILY SSF55909 3 340 3.39E-113 T 25-04-2016 SMD_RS09690 cd0ee5ca16849fe76e05994a88bae50f 345 PANTHER PTHR31377:SF0 1 345 1.6E-119 T 25-04-2016 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 PANTHER PTHR30537 1 293 3.4E-106 T 25-04-2016 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 Gene3D G3DSA:1.10.10.10 2 86 2.5E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 PANTHER PTHR30537:SF23 1 293 3.4E-106 T 25-04-2016 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 SUPERFAMILY SSF46785 2 111 1.33E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.5E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.5E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.5E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.6E-19 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 SUPERFAMILY SSF53850 89 297 6.36E-36 T 25-04-2016 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 Pfam PF03466 LysR substrate binding domain 88 296 1.4E-37 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 Gene3D G3DSA:3.40.190.10 92 174 1.5E-22 T 25-04-2016 SMD_RS13370 2b9856e9099bf9bc40742e2c9f200da9 298 Gene3D G3DSA:3.40.190.10 175 262 5.2E-11 T 25-04-2016 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 SMART SM00091 6 74 9.1E-5 T 25-04-2016 IPR000014 PAS domain SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 SUPERFAMILY SSF46689 181 230 3.9E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 SMART SM00342 145 227 1.0E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 Pfam PF08448 PAS fold 12 120 4.9E-21 T 25-04-2016 IPR013656 PAS fold-4 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 SUPERFAMILY SSF55785 8 117 1.03E-13 T 25-04-2016 IPR000014 PAS domain SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 Gene3D G3DSA:1.10.10.60 126 182 7.1E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 PANTHER PTHR11019 78 227 3.3E-41 T 25-04-2016 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 SUPERFAMILY SSF46689 128 178 6.27E-6 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 Gene3D G3DSA:3.30.450.20 7 117 2.1E-14 T 25-04-2016 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 PANTHER PTHR11019:SF113 78 227 3.3E-41 T 25-04-2016 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 Pfam PF12833 Helix-turn-helix domain 153 229 1.2E-20 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 182 223 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 130 174 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS16365 a2f8baa6de9c9c30ae44a3410b823d20 240 Gene3D G3DSA:1.10.10.60 183 229 1.7E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS21360 9ebf8b02dfee30d2fdeca5a4f973dc3f 139 Pfam PF00293 NUDIX domain 9 113 4.1E-15 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS21360 9ebf8b02dfee30d2fdeca5a4f973dc3f 139 Gene3D G3DSA:3.90.79.10 8 124 1.1E-21 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS21360 9ebf8b02dfee30d2fdeca5a4f973dc3f 139 PANTHER PTHR22769 8 123 8.1E-22 T 25-04-2016 SMD_RS21360 9ebf8b02dfee30d2fdeca5a4f973dc3f 139 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS21360 9ebf8b02dfee30d2fdeca5a4f973dc3f 139 SUPERFAMILY SSF55811 7 126 1.07E-22 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS21360 9ebf8b02dfee30d2fdeca5a4f973dc3f 139 PANTHER PTHR22769:SF5 8 123 8.1E-22 T 25-04-2016 SMD_RS21320 39262aee3382d495fadebfb046d975a5 247 SUPERFAMILY SSF53901 36 160 3.81E-5 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS21320 39262aee3382d495fadebfb046d975a5 247 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 22 243 1.0E-70 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMD_RS13220 5a9d9d636bf37dccdbc9d1c5dc9e6e22 141 PANTHER PTHR33452 8 135 6.8E-25 T 25-04-2016 SMD_RS13220 5a9d9d636bf37dccdbc9d1c5dc9e6e22 141 Pfam PF07681 DoxX 10 96 2.8E-12 T 25-04-2016 IPR032808 DoxX family SMD_RS13220 5a9d9d636bf37dccdbc9d1c5dc9e6e22 141 PANTHER PTHR33452:SF1 8 135 6.8E-25 T 25-04-2016 SMD_RS05120 e1bc7de079db7fdba5bfcbabed0c87d0 307 PANTHER PTHR34351:SF1 1 307 3.3E-61 T 25-04-2016 SMD_RS05120 e1bc7de079db7fdba5bfcbabed0c87d0 307 Pfam PF01882 Protein of unknown function DUF58 200 276 1.6E-15 T 25-04-2016 IPR002881 Domain of unknown function DUF58 SMD_RS05120 e1bc7de079db7fdba5bfcbabed0c87d0 307 PANTHER PTHR34351 1 307 3.3E-61 T 25-04-2016 SMD_RS16400 34b7372975c426fcceb37d19d82aeb5b 225 PANTHER PTHR21666:SF204 39 207 2.7E-32 T 25-04-2016 SMD_RS16400 34b7372975c426fcceb37d19d82aeb5b 225 SUPERFAMILY SSF51261 29 209 9.94E-32 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS16400 34b7372975c426fcceb37d19d82aeb5b 225 PANTHER PTHR21666 39 207 2.7E-32 T 25-04-2016 SMD_RS16400 34b7372975c426fcceb37d19d82aeb5b 225 Gene3D G3DSA:2.70.70.10 56 210 2.1E-33 T 25-04-2016 SMD_RS16400 34b7372975c426fcceb37d19d82aeb5b 225 Pfam PF01551 Peptidase family M23 98 205 9.9E-22 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS07300 18b57e4b6cdc5c72806c4fa58b1dc71a 175 Gene3D G3DSA:3.40.50.1820 3 174 3.7E-34 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS07300 18b57e4b6cdc5c72806c4fa58b1dc71a 175 SUPERFAMILY SSF53474 4 172 2.63E-22 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13930 1b11fd2b20cdc30c3223f75c8b565242 441 PANTHER PTHR35243 8 440 8.3E-229 T 25-04-2016 SMD_RS13930 1b11fd2b20cdc30c3223f75c8b565242 441 PANTHER PTHR35243:SF12 8 440 8.3E-229 T 25-04-2016 SMD_RS00185 627ee6e060060bf20ea701862a10fbbe 363 PANTHER PTHR11228:SF26 13 315 4.1E-105 T 25-04-2016 SMD_RS00185 627ee6e060060bf20ea701862a10fbbe 363 PANTHER PTHR11228 13 315 4.1E-105 T 25-04-2016 SMD_RS00185 627ee6e060060bf20ea701862a10fbbe 363 SMART SM00729 66 291 5.2E-4 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMD_RS00185 627ee6e060060bf20ea701862a10fbbe 363 SUPERFAMILY SSF102114 41 279 3.4E-10 T 25-04-2016 SMD_RS00185 627ee6e060060bf20ea701862a10fbbe 363 Gene3D G3DSA:3.20.20.70 167 256 7.5E-6 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS00185 627ee6e060060bf20ea701862a10fbbe 363 Pfam PF04055 Radical SAM superfamily 70 248 4.2E-13 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 Pfam PF03958 Bacterial type II/III secretion system short domain 268 392 2.1E-15 T 25-04-2016 IPR005644 NolW-like SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 Pfam PF03958 Bacterial type II/III secretion system short domain 195 261 3.7E-11 T 25-04-2016 IPR005644 NolW-like SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 Pfam PF03958 Bacterial type II/III secretion system short domain 131 190 1.4E-11 T 25-04-2016 IPR005644 NolW-like SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PANTHER PTHR30332 26 686 3.0E-213 T 25-04-2016 SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR01032 Gene IV protein signature 499 522 1.5E-12 T 25-04-2016 SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR01032 Gene IV protein signature 572 600 1.5E-12 T 25-04-2016 SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR00811 Bacterial general secretion pathway protein D signature 392 402 1.8E-29 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR00811 Bacterial general secretion pathway protein D signature 609 627 1.8E-29 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR00811 Bacterial general secretion pathway protein D signature 632 646 1.8E-29 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR00811 Bacterial general secretion pathway protein D signature 509 519 1.8E-29 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PRINTS PR00811 Bacterial general secretion pathway protein D signature 474 498 1.8E-29 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 38 654 3.1E-189 T 25-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 Pfam PF00263 Bacterial type II and III secretion system protein 478 645 8.0E-50 T 25-04-2016 IPR004846 Type II/III secretion system GO:0009306 SMD_RS12615 e490062f61036f857cbf838400bb05a4 793 PANTHER PTHR30332:SF8 26 686 3.0E-213 T 25-04-2016 SMD_RS10220 f13d9fb8409b97b6554665865f14181e 316 SUPERFAMILY SSF103481 48 144 1.44E-7 T 25-04-2016 SMD_RS10220 f13d9fb8409b97b6554665865f14181e 316 SUPERFAMILY SSF103481 207 304 1.18E-5 T 25-04-2016 SMD_RS10220 f13d9fb8409b97b6554665865f14181e 316 PANTHER PTHR12715 1 301 6.0E-89 T 25-04-2016 SMD_RS10220 f13d9fb8409b97b6554665865f14181e 316 PANTHER PTHR12715:SF21 1 301 6.0E-89 T 25-04-2016 SMD_RS10220 f13d9fb8409b97b6554665865f14181e 316 Pfam PF00892 EamA-like transporter family 160 300 6.9E-7 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS10220 f13d9fb8409b97b6554665865f14181e 316 Pfam PF00892 EamA-like transporter family 8 141 1.1E-10 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 Gene3D G3DSA:2.40.110.10 121 218 1.4E-34 T 25-04-2016 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 SUPERFAMILY SSF47203 228 381 3.38E-58 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.2E-32 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 3.1E-49 T 25-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 SUPERFAMILY SSF56645 2 242 9.56E-76 T 25-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 PANTHER PTHR10909:SF305 2 377 2.8E-157 T 25-04-2016 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.3E-26 T 25-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 25-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 PANTHER PTHR10909 2 377 2.8E-157 T 25-04-2016 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 Gene3D G3DSA:1.20.140.10 219 380 1.1E-68 T 25-04-2016 SMD_RS14355 dcf6c8f6c1f40caa95063f609b528e02 382 Gene3D G3DSA:1.10.540.10 2 118 1.6E-38 T 25-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMD_RS11300 ce5ade6eac254e9020c5674c93def52c 181 Pfam PF11086 Protein of unknown function (DUF2878) 5 159 1.9E-36 T 25-04-2016 IPR021306 Protein of unknown function DUF2878 SMD_RS19025 43d081b4abcdbff1663848423b5241d9 298 SUPERFAMILY SSF103481 185 285 3.14E-10 T 25-04-2016 SMD_RS19025 43d081b4abcdbff1663848423b5241d9 298 PANTHER PTHR22911:SF66 4 296 1.5E-119 T 25-04-2016 SMD_RS19025 43d081b4abcdbff1663848423b5241d9 298 PANTHER PTHR22911 4 296 1.5E-119 T 25-04-2016 SMD_RS19025 43d081b4abcdbff1663848423b5241d9 298 Pfam PF00892 EamA-like transporter family 10 141 2.8E-17 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS19025 43d081b4abcdbff1663848423b5241d9 298 Pfam PF00892 EamA-like transporter family 154 279 1.5E-7 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS19025 43d081b4abcdbff1663848423b5241d9 298 SUPERFAMILY SSF103481 46 144 8.24E-16 T 25-04-2016 SMD_RS11180 fb7a10589873cce2d502de6365fd0f1d 415 Gene3D G3DSA:1.20.1600.10 6 409 1.9E-35 T 25-04-2016 SMD_RS11180 fb7a10589873cce2d502de6365fd0f1d 415 SUPERFAMILY SSF56954 10 409 1.96E-47 T 25-04-2016 SMD_RS11180 fb7a10589873cce2d502de6365fd0f1d 415 Pfam PF02321 Outer membrane efflux protein 20 205 2.5E-11 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS11180 fb7a10589873cce2d502de6365fd0f1d 415 Pfam PF02321 Outer membrane efflux protein 246 409 3.5E-15 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS10320 c1435a6e3f37c2c4a4d4889c18dd301a 243 Pfam PF03932 CutC family 6 205 1.8E-74 T 25-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SMD_RS10320 c1435a6e3f37c2c4a4d4889c18dd301a 243 PANTHER PTHR12598 1 217 4.9E-87 T 25-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SMD_RS10320 c1435a6e3f37c2c4a4d4889c18dd301a 243 Gene3D G3DSA:3.20.20.380 5 242 3.9E-83 T 25-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SMD_RS10320 c1435a6e3f37c2c4a4d4889c18dd301a 243 SUPERFAMILY SSF110395 6 242 2.75E-69 T 25-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SMD_RS10320 c1435a6e3f37c2c4a4d4889c18dd301a 243 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 5 242 36.432 T 25-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SMD_RS10320 c1435a6e3f37c2c4a4d4889c18dd301a 243 PANTHER PTHR12598:SF0 1 217 4.9E-87 T 25-04-2016 SMD_RS09705 ee78ce2326ef943bdf0f62a998c4d445 225 PANTHER PTHR21299 6 220 1.7E-69 T 25-04-2016 SMD_RS09705 ee78ce2326ef943bdf0f62a998c4d445 225 Pfam PF02224 Cytidylate kinase 9 219 2.3E-70 T 25-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SMD_RS09705 ee78ce2326ef943bdf0f62a998c4d445 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 217 5.2E-72 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SMD_RS09705 ee78ce2326ef943bdf0f62a998c4d445 225 SUPERFAMILY SSF52540 6 220 5.69E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09705 ee78ce2326ef943bdf0f62a998c4d445 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.216 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SMD_RS09705 ee78ce2326ef943bdf0f62a998c4d445 225 Gene3D G3DSA:3.40.50.300 6 220 3.6E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031:SF122 587 607 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031:SF122 25 222 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031:SF122 800 815 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031:SF122 246 378 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 Gene3D G3DSA:3.40.50.300 10 203 7.7E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 Pfam PF00270 DEAD/DEAH box helicase 23 199 2.4E-22 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PIRSF PIRSF037307 3 815 1.2E-130 T 25-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 SMART SM00487 17 239 2.8E-20 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031 587 607 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031 25 222 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031 800 815 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 PANTHER PTHR24031 246 378 5.4E-42 T 25-04-2016 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 9 814 0.0 T 25-04-2016 IPR026362 DEXH box helicase, DNA ligase-associated SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 Pfam PF00271 Helicase conserved C-terminal domain 258 355 1.2E-12 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 Pfam PF08494 DEAD/H associated 598 784 1.6E-43 T 25-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 SUPERFAMILY SSF52540 231 365 9.21E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 SUPERFAMILY SSF52540 30 201 9.21E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 SMART SM00490 278 360 6.8E-17 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS16155 bbbccb88ef13744b367bad226a4e5d77 819 Gene3D G3DSA:3.40.50.300 250 388 1.1E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 PANTHER PTHR30055 12 187 6.2E-28 T 25-04-2016 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.8E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 Gene3D G3DSA:1.10.357.10 11 201 4.4E-42 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 PANTHER PTHR30055:SF66 12 187 6.2E-28 T 25-04-2016 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 SUPERFAMILY SSF46689 11 81 2.99E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 6.8E-11 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS14335 8b1f1ef2ef7f7b68dd2d9494e747067f 218 SUPERFAMILY SSF48498 80 165 1.41E-8 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 Pfam PF03099 Biotin/lipoate A/B protein ligase family 79 175 5.7E-8 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 91 144 1.0E-19 T 25-04-2016 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 87 102 - T 25-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 PANTHER PTHR10993 25 221 3.4E-78 T 25-04-2016 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 PIRSF PIRSF016262 18 234 2.8E-58 T 25-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 43 218 6.4E-62 T 25-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 SUPERFAMILY SSF55681 18 222 2.65E-70 T 25-04-2016 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 Hamap MF_00013 Octanoyltransferase [lipB]. 21 222 38.101 T 25-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SMD_RS18825 21e376c21fabc9611e03b652fac5bdeb 236 Gene3D G3DSA:3.90.1550.10 21 220 2.4E-74 T 25-04-2016 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 26 423 2.0E-89 T 25-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 Pfam PF07690 Major Facilitator Superfamily 32 372 3.3E-19 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 105 422 2.3E-107 T 25-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 Gene3D G3DSA:1.20.1250.20 25 228 2.8E-16 T 25-04-2016 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 SUPERFAMILY SSF103473 23 426 4.19E-38 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 PANTHER PTHR23514 201 425 5.3E-131 T 25-04-2016 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 PANTHER PTHR23514 24 183 5.3E-131 T 25-04-2016 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 PANTHER PTHR23514:SF7 201 425 5.3E-131 T 25-04-2016 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 PANTHER PTHR23514:SF7 24 183 5.3E-131 T 25-04-2016 SMD_RS10360 8df9f1ca9e236108bb380a8cef19d880 437 Gene3D G3DSA:1.20.1250.20 247 419 2.1E-9 T 25-04-2016 SMD_RS02765 5c94e26040877f33c9309cc006592f3c 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 25-04-2016 IPR000614 Free Met sulfoxide reductase conserved site SMD_RS02765 5c94e26040877f33c9309cc006592f3c 160 Pfam PF13185 GAF domain 53 155 1.4E-10 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMD_RS02765 5c94e26040877f33c9309cc006592f3c 160 SUPERFAMILY SSF55781 12 159 2.62E-42 T 25-04-2016 IPR029016 GAF domain-like SMD_RS02765 5c94e26040877f33c9309cc006592f3c 160 Gene3D G3DSA:3.30.450.40 11 159 9.8E-51 T 25-04-2016 IPR029016 GAF domain-like SMD_RS02765 5c94e26040877f33c9309cc006592f3c 160 PANTHER PTHR21021 7 153 2.4E-55 T 25-04-2016 SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 Gene3D G3DSA:3.40.50.300 445 661 6.5E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 Gene3D G3DSA:3.40.50.300 167 268 6.5E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 657 0.0 T 25-04-2016 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 SUPERFAMILY SSF52540 399 659 2.1E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 SUPERFAMILY SSF52540 146 344 2.1E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 657 3.0E-266 T 25-04-2016 IPR022458 Conjugative coupling factor TraG/TraD SMD_RS08015 eb37efa62db6b01cb60c9f531efb66e6 730 Pfam PF12696 TraM recognition site of TraD and TraG 509 636 3.7E-10 T 25-04-2016 IPR032689 TraD/TraG, TraM recognition site SMD_RS08670 8efe16f6934e092da4e3c0ca41fadb97 153 PANTHER PTHR23091 1 134 3.8E-15 T 25-04-2016 SMD_RS08670 8efe16f6934e092da4e3c0ca41fadb97 153 Pfam PF13673 Acetyltransferase (GNAT) domain 56 134 4.4E-15 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS08670 8efe16f6934e092da4e3c0ca41fadb97 153 Gene3D G3DSA:3.40.630.30 1 152 5.7E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS08670 8efe16f6934e092da4e3c0ca41fadb97 153 SUPERFAMILY SSF55729 1 150 7.62E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS21255 c2494b750efa391e595f58cd9d865840 185 Pfam PF11659 Protein of unknown function (DUF3261) 14 154 4.2E-35 T 25-04-2016 IPR021675 Protein of unknown function DUF3261 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 PANTHER PTHR13847:SF5 5 357 4.6E-60 T 25-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 SUPERFAMILY SSF101790 274 361 5.4E-22 T 25-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 SUPERFAMILY SSF103025 3 281 4.08E-93 T 25-04-2016 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Gene3D G3DSA:3.30.70.1400 54 137 8.4E-32 T 25-04-2016 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 45.215 T 25-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 3.2E-89 T 25-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Gene3D G3DSA:2.40.30.110 283 362 4.1E-24 T 25-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 PANTHER PTHR13847 5 357 4.6E-60 T 25-04-2016 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Gene3D G3DSA:3.30.1360.120 3 53 1.3E-50 T 25-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Gene3D G3DSA:3.30.1360.120 144 236 1.3E-50 T 25-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 5.9E-130 T 25-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 PIRSF PIRSF006487 1 365 2.6E-86 T 25-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS16715 e54c3f99800549fe9ce478c3c4e22a97 370 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 353 1.3E-19 T 25-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 6.8E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 6.8E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 6.8E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 SMART SM00421 169 226 2.6E-20 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 Pfam PF03472 Autoinducer binding domain 23 156 1.1E-12 T 25-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 PANTHER PTHR26402 172 230 1.3E-12 T 25-04-2016 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 SUPERFAMILY SSF46894 158 232 3.4E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 Gene3D G3DSA:3.30.450.80 9 174 5.4E-10 T 25-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 171 226 4.0E-17 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 SUPERFAMILY SSF75516 10 162 3.53E-11 T 25-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 3 232 2.3E-92 T 25-04-2016 IPR019941 Transcription regulator LuxR, chaperone HchA-associated SMD_RS09355 4bff56c9560d4cba6bbf8553173fccca 234 Gene3D G3DSA:1.10.10.10 175 230 6.7E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20235 1ace39aa4cdd6c65f5c9dff3b36a03a7 106 SUPERFAMILY SSF103481 4 103 1.31E-20 T 25-04-2016 SMD_RS20235 1ace39aa4cdd6c65f5c9dff3b36a03a7 106 PANTHER PTHR30561 1 104 1.5E-49 T 25-04-2016 SMD_RS20235 1ace39aa4cdd6c65f5c9dff3b36a03a7 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.5E-28 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMD_RS20235 1ace39aa4cdd6c65f5c9dff3b36a03a7 106 PANTHER PTHR30561:SF0 1 104 1.5E-49 T 25-04-2016 SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 TIGRFAM TIGR00260 thrC: threonine synthase 72 395 1.3E-73 T 25-04-2016 IPR004450 Threonine synthase-like SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 Gene3D G3DSA:3.40.50.1100 193 403 3.7E-63 T 25-04-2016 SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 376 2.1E-21 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 PANTHER PTHR10314:SF1 25 428 7.5E-107 T 25-04-2016 SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 SUPERFAMILY SSF53686 1 427 8.37E-118 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 Gene3D G3DSA:3.90.1380.10 1 80 4.2E-16 T 25-04-2016 IPR029144 Threonine synthase, N-terminal SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 Pfam PF14821 Threonine synthase N terminus 2 76 4.3E-11 T 25-04-2016 IPR029144 Threonine synthase, N-terminal SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 Gene3D G3DSA:3.40.50.1100 102 192 6.4E-13 T 25-04-2016 SMD_RS10235 7a9621bee9d8003715a2c24db96fd156 428 PANTHER PTHR10314 25 428 7.5E-107 T 25-04-2016 SMD_RS21660 44101bbdcc9e70f05d640d0d7ee52d5e 297 PANTHER PTHR15629 26 204 3.4E-53 T 25-04-2016 SMD_RS21660 44101bbdcc9e70f05d640d0d7ee52d5e 297 Pfam PF04366 Las17-binding protein actin regulator 99 206 1.3E-28 T 25-04-2016 IPR007461 Ysc84 actin-binding domain SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 PANTHER PTHR30332 225 468 1.7E-48 T 25-04-2016 SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 Pfam PF13629 Pilus formation protein N terminal region 94 155 4.9E-13 T 25-04-2016 IPR032789 Pilus formation protein, N-terminal SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 429 447 1.7E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 466 1.7E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 1.7E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 304 328 1.7E-11 T 25-04-2016 IPR001775 GspD/PilQ family SMD_RS05035 50773e2050db50016684d0a9cd8d91c3 498 Pfam PF00263 Bacterial type II and III secretion system protein 309 464 1.3E-40 T 25-04-2016 IPR004846 Type II/III secretion system GO:0009306 SMD_RS19220 40873a9b841d5b29092dda7703215ef0 323 SUPERFAMILY SSF46785 2 47 3.69E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19220 40873a9b841d5b29092dda7703215ef0 323 PANTHER PTHR34580:SF3 1 322 1.2E-100 T 25-04-2016 SMD_RS19220 40873a9b841d5b29092dda7703215ef0 323 Gene3D G3DSA:1.10.10.10 1 64 5.2E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19220 40873a9b841d5b29092dda7703215ef0 323 Pfam PF08279 HTH domain 6 61 6.9E-13 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMD_RS19220 40873a9b841d5b29092dda7703215ef0 323 PANTHER PTHR34580 1 322 1.2E-100 T 25-04-2016 SMD_RS19220 40873a9b841d5b29092dda7703215ef0 323 Pfam PF13280 WYL domain 145 315 3.3E-38 T 25-04-2016 IPR026881 WYL domain SMD_RS02270 3bb9be03408f603afa196336f778e109 177 PANTHER PTHR34406 8 171 1.9E-53 T 25-04-2016 SMD_RS02270 3bb9be03408f603afa196336f778e109 177 SMART SM00867 7 171 8.5E-68 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS02270 3bb9be03408f603afa196336f778e109 177 SUPERFAMILY SSF101874 6 172 1.7E-51 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS02270 3bb9be03408f603afa196336f778e109 177 Gene3D G3DSA:2.40.128.110 6 173 2.6E-56 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS02270 3bb9be03408f603afa196336f778e109 177 PANTHER PTHR34406:SF1 8 171 1.9E-53 T 25-04-2016 SMD_RS02270 3bb9be03408f603afa196336f778e109 177 Pfam PF04264 YceI-like domain 8 170 9.1E-43 T 25-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PANTHER PTHR11732 1 267 1.5E-163 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PANTHER PTHR11732:SF100 1 267 1.5E-163 T 25-04-2016 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 SUPERFAMILY SSF51430 2 259 3.8E-81 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 Pfam PF00248 Aldo/keto reductase family 8 250 3.0E-46 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PIRSF PIRSF000097 1 264 5.3E-66 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 Gene3D G3DSA:3.20.20.100 1 260 1.3E-88 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 2.9E-44 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.9E-44 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.9E-44 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 2.9E-44 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS12375 4c3dbb22168f751d2561b4507e4ab940 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 2.9E-44 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMD_RS11925 032922a82f39208ddb58bfd252fcff94 246 SUPERFAMILY SSF54060 20 221 1.71E-41 T 25-04-2016 SMD_RS11925 032922a82f39208ddb58bfd252fcff94 246 SMART SM00477 28 226 6.4E-11 T 25-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SMD_RS11925 032922a82f39208ddb58bfd252fcff94 246 Gene3D G3DSA:3.40.570.10 22 236 3.7E-40 T 25-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SMD_RS11925 032922a82f39208ddb58bfd252fcff94 246 PANTHER PTHR13966 25 239 7.9E-31 T 25-04-2016 SMD_RS11925 032922a82f39208ddb58bfd252fcff94 246 Pfam PF01223 DNA/RNA non-specific endonuclease 22 219 3.0E-36 T 25-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SMD_RS11925 032922a82f39208ddb58bfd252fcff94 246 SMART SM00892 27 226 4.1E-30 T 25-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SMD_RS15855 47e138899e92694689eea6af2085e20a 495 Gene3D G3DSA:2.40.50.140 33 132 7.3E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15855 47e138899e92694689eea6af2085e20a 495 PANTHER PTHR30001 1 495 1.4E-208 T 25-04-2016 SMD_RS15855 47e138899e92694689eea6af2085e20a 495 Pfam PF10150 Ribonuclease E/G family 128 399 5.0E-103 T 25-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SMD_RS15855 47e138899e92694689eea6af2085e20a 495 SUPERFAMILY SSF50249 39 132 1.33E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS15855 47e138899e92694689eea6af2085e20a 495 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 432 7.4E-157 T 25-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SMD_RS15855 47e138899e92694689eea6af2085e20a 495 SMART SM00316 37 126 3.4E-4 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 Gene3D G3DSA:3.40.50.1000 488 629 4.6E-54 T 25-04-2016 IPR023214 HAD-like domain SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 Gene3D G3DSA:3.40.50.1000 332 376 4.6E-54 T 25-04-2016 IPR023214 HAD-like domain SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 Gene3D G3DSA:2.70.150.10 92 259 3.2E-29 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PANTHER PTHR24093:SF50 16 673 4.4E-220 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PANTHER PTHR24093 16 673 4.4E-220 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 SUPERFAMILY SSF81665 260 355 1.44E-12 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 SUPERFAMILY SSF81665 128 162 1.44E-12 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 SUPERFAMILY SSF81665 609 624 1.44E-12 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 SUPERFAMILY SSF56784 359 379 4.78E-55 T 25-04-2016 IPR023214 HAD-like domain SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 SUPERFAMILY SSF56784 457 667 4.78E-55 T 25-04-2016 IPR023214 HAD-like domain SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 71 90 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 282 296 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 148 166 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 537 554 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 344 359 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 633 647 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00943 Copper-transporting ATPase signature 128 147 1.2E-15 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 496 1.2E-29 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 595 1.2E-29 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 517 1.2E-29 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 579 1.2E-29 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 209 223 1.2E-29 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.2E-29 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 Pfam PF00122 E1-E2 ATPase 129 352 3.1E-66 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 67 670 2.3E-173 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 Pfam PF00702 haloacid dehalogenase-like hydrolase 357 574 2.2E-39 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 86 669 9.5E-183 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 363 369 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 130 638 2.5E-88 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 SUPERFAMILY SSF81653 162 259 3.53E-26 T 25-04-2016 SMD_RS07780 66e2af3fe3b13f6429a96eaa5d099548 674 Gene3D G3DSA:3.40.1110.10 377 487 9.9E-21 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMD_RS14310 e40a22b93cf673fd5c5beeccefe861e5 326 SUPERFAMILY SSF51430 6 316 2.88E-59 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS14310 e40a22b93cf673fd5c5beeccefe861e5 326 Pfam PF00248 Aldo/keto reductase family 19 309 7.8E-37 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS14310 e40a22b93cf673fd5c5beeccefe861e5 326 Gene3D G3DSA:3.20.20.100 6 321 5.5E-57 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS14310 e40a22b93cf673fd5c5beeccefe861e5 326 PANTHER PTHR11732 5 313 9.5E-60 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS06310 07a484e49dc82a50ab4ce72d6e43d636 137 SUPERFAMILY SSF88659 50 126 3.27E-16 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06310 07a484e49dc82a50ab4ce72d6e43d636 137 Gene3D G3DSA:1.10.10.10 63 126 5.2E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06310 07a484e49dc82a50ab4ce72d6e43d636 137 Pfam PF08281 Sigma-70, region 4 70 119 1.6E-15 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06310 07a484e49dc82a50ab4ce72d6e43d636 137 PANTHER PTHR30173 19 126 7.7E-19 T 25-04-2016 SMD_RS06310 07a484e49dc82a50ab4ce72d6e43d636 137 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 125 2.5E-17 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS06310 07a484e49dc82a50ab4ce72d6e43d636 137 PANTHER PTHR30173:SF30 19 126 7.7E-19 T 25-04-2016 SMD_RS17710 172eaa81ae8e9d374255a406246c6d3f 121 PANTHER PTHR34134 1 119 4.1E-35 T 25-04-2016 SMD_RS17710 172eaa81ae8e9d374255a406246c6d3f 121 Gene3D G3DSA:1.10.10.10 1 76 3.5E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17710 172eaa81ae8e9d374255a406246c6d3f 121 PANTHER PTHR34134:SF1 1 119 4.1E-35 T 25-04-2016 SMD_RS17710 172eaa81ae8e9d374255a406246c6d3f 121 PIRSF PIRSF019455 1 121 1.4E-37 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMD_RS17710 172eaa81ae8e9d374255a406246c6d3f 121 SUPERFAMILY SSF46785 2 118 1.64E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS17710 172eaa81ae8e9d374255a406246c6d3f 121 Pfam PF03965 Penicillinase repressor 4 117 2.1E-35 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 166 377 7.9E-73 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 PANTHER PTHR15184 19 460 1.7E-219 T 25-04-2016 SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 PANTHER PTHR15184:SF9 19 460 1.7E-219 T 25-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 Gene3D G3DSA:3.40.50.300 114 379 4.4E-89 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 SUPERFAMILY SSF52540 114 381 2.55E-93 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 SMART SM00382 178 362 7.1E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS10830 b08de851ec0023346842797921b3a9cc 461 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 37 457 3.3E-166 T 25-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMD_RS12970 a0515b379101d256c38a5cd1a934bf3e 506 SUPERFAMILY SSF52833 39 148 9.05E-24 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS12970 a0515b379101d256c38a5cd1a934bf3e 506 Gene3D G3DSA:3.40.30.10 7 60 9.8E-6 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS12970 a0515b379101d256c38a5cd1a934bf3e 506 Gene3D G3DSA:3.40.30.10 61 147 2.0E-22 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS12970 a0515b379101d256c38a5cd1a934bf3e 506 Pfam PF13899 Thioredoxin-like 42 125 2.3E-14 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 1.4E-26 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 PANTHER PTHR24095 10 644 0.0 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 PANTHER PTHR24095:SF178 10 644 0.0 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 0.0 T 25-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 4.3E-19 T 25-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Pfam PF00501 AMP-binding enzyme 81 521 5.5E-92 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Gene3D G3DSA:3.40.50.980 77 265 1.7E-42 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Gene3D G3DSA:3.40.50.980 266 423 8.4E-30 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 SUPERFAMILY SSF56801 13 638 4.19E-187 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 52.543 T 25-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Gene3D G3DSA:2.30.38.10 439 514 2.8E-7 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 Gene3D G3DSA:3.30.300.30 517 637 6.2E-29 T 25-04-2016 SMD_RS21565 965d671ece996beef27aca1e52e30b72 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 PANTHER PTHR10443:SF22 19 281 3.4E-166 T 25-04-2016 SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 PANTHER PTHR10443:SF22 326 409 3.4E-166 T 25-04-2016 SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 SUPERFAMILY SSF51556 326 407 1.86E-82 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 SUPERFAMILY SSF51556 32 281 1.86E-82 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 37 403 1.7E-97 T 25-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 Gene3D G3DSA:3.20.20.140 32 410 8.1E-109 T 25-04-2016 SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 PANTHER PTHR10443 19 281 3.4E-166 T 25-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SMD_RS21930 842c9e9ebadbc5ac04dd9fb42309f6d8 413 PANTHER PTHR10443 326 409 3.4E-166 T 25-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SMD_RS03475 b22386431030863b5d01f14bcde5b96c 249 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 23.51 T 25-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 SMD_RS03475 b22386431030863b5d01f14bcde5b96c 249 Pfam PF08478 POTRA domain, FtsQ-type 35 103 1.5E-18 T 25-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SMD_RS03475 b22386431030863b5d01f14bcde5b96c 249 Pfam PF03799 Cell division protein FtsQ 107 219 9.0E-23 T 25-04-2016 IPR005548 Cell division protein FtsQ/DivIB SMD_RS03475 b22386431030863b5d01f14bcde5b96c 249 PANTHER PTHR35851:SF1 1 244 1.3E-64 T 25-04-2016 SMD_RS03475 b22386431030863b5d01f14bcde5b96c 249 PANTHER PTHR35851 1 244 1.3E-64 T 25-04-2016 SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 SMART SM00116 13 60 3.6E-7 T 25-04-2016 IPR000644 CBS domain SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 SMART SM00116 78 125 7.2E-6 T 25-04-2016 IPR000644 CBS domain SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 Gene3D G3DSA:3.10.580.10 1 126 2.0E-27 T 25-04-2016 SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 Pfam PF00571 CBS domain 13 60 8.5E-10 T 25-04-2016 IPR000644 CBS domain SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 Pfam PF00571 CBS domain 74 125 1.8E-8 T 25-04-2016 IPR000644 CBS domain SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 PANTHER PTHR11911 1 131 3.2E-20 T 25-04-2016 SMD_RS19070 93acd6e02357dede7be1cb0c54515de5 143 SUPERFAMILY SSF54631 1 139 1.1E-25 T 25-04-2016 SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 376 1.1E-46 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 SUPERFAMILY SSF111369 46 232 5.23E-20 T 25-04-2016 SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 Gene3D G3DSA:2.40.50.100 180 212 3.1E-14 T 25-04-2016 SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 Gene3D G3DSA:2.40.50.100 59 91 3.1E-14 T 25-04-2016 SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 261 1.6E-13 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 PANTHER PTHR30572:SF3 3 376 1.8E-84 T 25-04-2016 SMD_RS12145 021152259bf696fe66f39e1a0b0c81ff 393 PANTHER PTHR30572 3 376 1.8E-84 T 25-04-2016 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 PIRSF PIRSF000505 6 435 1.1E-119 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 Gene3D G3DSA:3.65.10.10 235 431 6.6E-53 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 425 6.0E-121 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 423 9.4E-118 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 Gene3D G3DSA:3.65.10.10 25 234 2.9E-60 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 433 32.027 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 SUPERFAMILY SSF55205 7 432 6.7E-128 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 ProSitePatterns PS00885 EPSP synthase signature 2. 344 362 - T 25-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 PANTHER PTHR21090:SF5 10 434 5.7E-177 T 25-04-2016 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 PANTHER PTHR21090 10 434 5.7E-177 T 25-04-2016 SMD_RS14000 d2d89fa478f011808f5c18268f17c933 435 ProSitePatterns PS00104 EPSP synthase signature 1. 92 106 - T 25-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 PANTHER PTHR38779 1 120 2.2E-14 T 25-04-2016 SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 SUPERFAMILY SSF54523 8 64 1.57E-6 T 25-04-2016 SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 7 77 3.8E-19 T 25-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 PANTHER PTHR38779:SF1 1 120 2.2E-14 T 25-04-2016 SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 Pfam PF02501 Type II secretion system (T2SS), protein I 41 113 3.1E-9 T 25-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 Pfam PF13633 Prokaryotic N-terminal methylation site 7 31 1.1E-10 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12585 522b66db02b09d0b3a616b5e3917a492 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 8.1E-8 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 7.2E-25 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 SUPERFAMILY SSF53901 213 400 3.17E-59 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 SMART SM00825 Beta-ketoacyl synthase 4 402 2.3E-11 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 PANTHER PTHR11712 1 399 3.4E-161 T 25-04-2016 SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 SUPERFAMILY SSF53901 1 251 4.39E-64 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 Gene3D G3DSA:3.40.47.10 6 257 2.5E-62 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 Gene3D G3DSA:3.40.47.10 261 401 6.0E-47 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS02710 7ecb4a77d1b08bbd044f3ec92cc19632 402 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 9.3E-47 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Gene3D G3DSA:2.60.40.10 34 121 2.4E-7 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Gene3D G3DSA:2.60.40.10 133 235 6.7E-35 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 SUPERFAMILY SSF81296 34 123 8.05E-9 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 SUPERFAMILY SSF51445 184 632 1.39E-106 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 PANTHER PTHR10357 68 742 0.0 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 PANTHER PTHR10357:SF158 68 742 0.0 T 25-04-2016 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 SMART SM00642 265 605 2.8E-7 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 137 740 2.8E-259 T 25-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 SUPERFAMILY SSF51011 639 742 2.64E-33 T 25-04-2016 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 742 3.1E-23 T 25-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Gene3D G3DSA:2.60.40.1180 639 741 1.0E-35 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Gene3D G3DSA:3.20.20.80 260 623 1.7E-89 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 PIRSF PIRSF000463 26 744 1.8E-267 T 25-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 139 222 7.0E-23 T 25-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 116 743 42.062 T 25-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SMD_RS12700 2e13fb86b46c3364a387f81cf1cb5a51 744 Pfam PF00128 Alpha amylase, catalytic domain 281 360 1.4E-6 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS20535 d486b6fab3e10d5deafc127c7bb63e66 83 PANTHER PTHR38040 2 79 4.5E-30 T 25-04-2016 SMD_RS20535 d486b6fab3e10d5deafc127c7bb63e66 83 PANTHER PTHR38040:SF1 2 79 4.5E-30 T 25-04-2016 SMD_RS20535 d486b6fab3e10d5deafc127c7bb63e66 83 Pfam PF04380 Membrane fusogenic activity 1 77 5.3E-25 T 25-04-2016 IPR007475 Membrane fusogenic activity SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 Pfam PF00571 CBS domain 12 61 2.6E-9 T 25-04-2016 IPR000644 CBS domain SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 Pfam PF00571 CBS domain 72 124 3.4E-11 T 25-04-2016 IPR000644 CBS domain SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 Gene3D G3DSA:3.10.580.10 12 126 4.9E-32 T 25-04-2016 SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 SMART SM00116 14 61 1.1E-5 T 25-04-2016 IPR000644 CBS domain SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 SMART SM00116 79 126 8.3E-9 T 25-04-2016 IPR000644 CBS domain SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 SUPERFAMILY SSF54631 12 141 2.15E-32 T 25-04-2016 SMD_RS16625 d2f1d1049ba95ee391ba710d6b815980 143 PANTHER PTHR11911 12 140 2.4E-36 T 25-04-2016 SMD_RS02210 60cedceeafdc9148634db01e385fe2e1 250 SUPERFAMILY SSF56784 11 222 1.8E-27 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02210 60cedceeafdc9148634db01e385fe2e1 250 Gene3D G3DSA:3.40.50.1000 97 243 3.8E-44 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02210 60cedceeafdc9148634db01e385fe2e1 250 Gene3D G3DSA:1.10.150.240 27 96 1.2E-28 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMD_RS02210 60cedceeafdc9148634db01e385fe2e1 250 PANTHER PTHR12725:SF59 1 246 2.4E-94 T 25-04-2016 SMD_RS02210 60cedceeafdc9148634db01e385fe2e1 250 PANTHER PTHR12725 1 246 2.4E-94 T 25-04-2016 SMD_RS02210 60cedceeafdc9148634db01e385fe2e1 250 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 193 3.8E-8 T 25-04-2016 IPR023214 HAD-like domain SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 PANTHER PTHR11700 1 102 7.8E-53 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.2E-35 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.7E-18 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.7E-18 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.7E-18 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 Gene3D G3DSA:3.30.70.600 4 102 9.5E-44 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.046 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.0E-46 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 SMART SM01403 7 101 3.0E-56 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 25-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04165 88bc7ba949b6285ed9df192d3e73e89c 103 SUPERFAMILY SSF54999 5 102 2.62E-37 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 PANTHER PTHR30582 16 320 1.5E-97 T 25-04-2016 SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 Gene3D G3DSA:2.40.440.10 184 318 5.4E-29 T 25-04-2016 SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 PANTHER PTHR30582:SF1 16 320 1.5E-97 T 25-04-2016 SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 SUPERFAMILY SSF47090 47 99 8.95E-13 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 Gene3D G3DSA:1.10.101.10 49 99 5.0E-12 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 Pfam PF03734 L,D-transpeptidase catalytic domain 188 317 2.5E-18 T 25-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 Pfam PF01471 Putative peptidoglycan binding domain 49 98 1.0E-10 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS16395 eaf930741f0a8f9e668bc114356b9c0a 320 SUPERFAMILY SSF141523 187 317 1.44E-26 T 25-04-2016 SMD_RS13760 ba96d42a787df205b85aec5c47efe311 813 Gene3D G3DSA:3.40.50.300 437 512 5.4E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13760 ba96d42a787df205b85aec5c47efe311 813 Gene3D G3DSA:3.40.50.300 591 709 5.4E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13760 ba96d42a787df205b85aec5c47efe311 813 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 171 376 8.2E-51 T 25-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 SMD_RS13760 ba96d42a787df205b85aec5c47efe311 813 SUPERFAMILY SSF52540 385 711 5.97E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13760 ba96d42a787df205b85aec5c47efe311 813 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 6 798 1.0E-224 T 25-04-2016 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 SMD_RS02260 4d5ffc8e5bd80e82eb8839e94c597cd3 319 PANTHER PTHR33986:SF1 60 316 1.2E-77 T 25-04-2016 SMD_RS02260 4d5ffc8e5bd80e82eb8839e94c597cd3 319 Pfam PF06258 Mitochondrial fission ELM1 16 316 6.4E-84 T 25-04-2016 IPR009367 Mitochondrial fission protein ELM1-like SMD_RS02260 4d5ffc8e5bd80e82eb8839e94c597cd3 319 PANTHER PTHR33986 60 316 1.2E-77 T 25-04-2016 SMD_RS14760 e7ebaab0fb6d68ad88fcd510ed53e837 302 PANTHER PTHR33969 31 296 1.3E-99 T 25-04-2016 SMD_RS14760 e7ebaab0fb6d68ad88fcd510ed53e837 302 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 21.816 T 25-04-2016 IPR003768 Segregation and condensation protein A SMD_RS14760 e7ebaab0fb6d68ad88fcd510ed53e837 302 PANTHER PTHR33969:SF2 31 296 1.3E-99 T 25-04-2016 SMD_RS14760 e7ebaab0fb6d68ad88fcd510ed53e837 302 Pfam PF02616 Segregation and condensation protein ScpA 64 274 1.1E-27 T 25-04-2016 IPR003768 Segregation and condensation protein A SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 PANTHER PTHR34216 1 114 8.9E-60 T 25-04-2016 SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 PANTHER PTHR34216 134 263 8.9E-60 T 25-04-2016 SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 Gene3D G3DSA:3.20.20.370 139 228 7.5E-29 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 Gene3D G3DSA:3.20.20.370 32 100 7.5E-29 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 Pfam PF01522 Polysaccharide deacetylase 56 223 1.9E-35 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 SUPERFAMILY SSF88713 20 100 4.2E-42 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS15515 d9025b8875d35f04ed5eb08375dd551a 285 SUPERFAMILY SSF88713 139 249 4.2E-42 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS11265 c4a401961091bc57db9ae1a499c1cf7d 994 Pfam PF13700 Domain of unknown function (DUF4158) 3 168 1.9E-28 T 25-04-2016 IPR025296 Domain of unknown function DUF4158 SMD_RS11265 c4a401961091bc57db9ae1a499c1cf7d 994 Pfam PF01526 Tn3 transposase DDE domain 588 974 1.7E-150 T 25-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 41 1.6E-9 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 SUPERFAMILY SSF54523 21 149 6.28E-20 T 25-04-2016 SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 Pfam PF00114 Pilin (bacterial filament) 49 150 6.4E-16 T 25-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 Pfam PF13633 Prokaryotic N-terminal methylation site 18 42 3.5E-10 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 PANTHER PTHR30093 16 68 3.0E-14 T 25-04-2016 SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 Gene3D G3DSA:3.30.700.10 21 149 7.4E-20 T 25-04-2016 SMD_RS15225 3907c6f111da36ac2b6647b6325f1acc 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS12490 6eda83e04bce2e136de0e933d6121d00 134 Gene3D G3DSA:3.40.50.2300 12 126 3.8E-14 T 25-04-2016 SMD_RS12490 6eda83e04bce2e136de0e933d6121d00 134 SMART SM00448 14 120 2.2E-7 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS12490 6eda83e04bce2e136de0e933d6121d00 134 SUPERFAMILY SSF52172 12 125 2.7E-17 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS12490 6eda83e04bce2e136de0e933d6121d00 134 Pfam PF00072 Response regulator receiver domain 16 95 3.0E-7 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 PANTHER PTHR24567:SF27 19 226 7.1E-116 T 25-04-2016 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 Pfam PF00325 Bacterial regulatory proteins, crp family 185 216 2.3E-13 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 2.3E-18 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 ProSitePatterns PS00042 Crp-type HTH domain signature. 187 210 - T 25-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 Gene3D G3DSA:2.60.120.10 20 162 2.1E-27 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 SUPERFAMILY SSF51206 26 154 9.95E-24 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 1.8E-6 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 1.8E-6 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 SMART SM00100 17 141 7.5E-20 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 SUPERFAMILY SSF46785 158 226 2.92E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 Gene3D G3DSA:1.10.10.10 163 226 2.3E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 SMART SM00419 179 227 6.4E-12 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS20245 085c33ed63626f4b21e9d77cd613c0ee 229 PANTHER PTHR24567 19 226 7.1E-116 T 25-04-2016 SMD_RS17985 16e0ef67096cd48d570e1cf3630077c5 98 PANTHER PTHR34981 2 94 5.4E-25 T 25-04-2016 SMD_RS17985 16e0ef67096cd48d570e1cf3630077c5 98 SUPERFAMILY SSF102829 6 94 8.24E-23 T 25-04-2016 IPR007838 Cell division protein ZapA-like SMD_RS17985 16e0ef67096cd48d570e1cf3630077c5 98 PANTHER PTHR34981:SF1 2 94 5.4E-25 T 25-04-2016 SMD_RS17985 16e0ef67096cd48d570e1cf3630077c5 98 Pfam PF05164 Cell division protein ZapA 6 90 5.9E-20 T 25-04-2016 IPR007838 Cell division protein ZapA-like SMD_RS10575 c878d29bec9103f4e24c66e85f2ec438 260 PANTHER PTHR35010:SF2 1 259 3.7E-86 T 25-04-2016 SMD_RS10575 c878d29bec9103f4e24c66e85f2ec438 260 SUPERFAMILY SSF47413 33 84 5.33E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS10575 c878d29bec9103f4e24c66e85f2ec438 260 PANTHER PTHR35010 1 259 3.7E-86 T 25-04-2016 SMD_RS10575 c878d29bec9103f4e24c66e85f2ec438 260 Gene3D G3DSA:1.10.260.40 5 84 4.2E-18 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS10575 c878d29bec9103f4e24c66e85f2ec438 260 Pfam PF13560 Helix-turn-helix domain 10 87 2.5E-19 T 25-04-2016 SMD_RS10575 c878d29bec9103f4e24c66e85f2ec438 260 SMART SM00530 14 85 3.4E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.3E-40 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 Gene3D G3DSA:1.20.1330.10 296 350 4.1E-58 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 Gene3D G3DSA:1.20.1330.10 56 172 4.1E-58 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 Pfam PF00700 Bacterial flagellin C-terminal helical region 308 393 4.2E-28 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 SUPERFAMILY SSF64518 1 394 2.88E-100 T 25-04-2016 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PRINTS PR00207 Flagellin signature 76 95 1.3E-26 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PRINTS PR00207 Flagellin signature 37 54 1.3E-26 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PRINTS PR00207 Flagellin signature 111 134 1.3E-26 T 25-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PANTHER PTHR30244:SF1 2 190 1.7E-127 T 25-04-2016 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PANTHER PTHR30244:SF1 238 394 1.7E-127 T 25-04-2016 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PANTHER PTHR30244 2 190 1.7E-127 T 25-04-2016 SMD_RS10905 c9fd09fa45865d49e8c2664f9d1265c6 394 PANTHER PTHR30244 238 394 1.7E-127 T 25-04-2016 SMD_RS01380 51f3f09c7506785765078f77b4fd6cae 318 Pfam PF01545 Cation efflux family 18 227 4.7E-31 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS01380 51f3f09c7506785765078f77b4fd6cae 318 Gene3D G3DSA:1.20.1510.10 16 224 1.5E-16 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMD_RS01380 51f3f09c7506785765078f77b4fd6cae 318 SUPERFAMILY SSF161111 12 226 4.05E-24 T 25-04-2016 SMD_RS09125 359a92abdbe0c4e85f32e1ee89c42e05 241 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 18 230 2.4E-41 T 25-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SMD_RS09125 359a92abdbe0c4e85f32e1ee89c42e05 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 227 2.4E-47 T 25-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SMD_RS09125 359a92abdbe0c4e85f32e1ee89c42e05 241 PANTHER PTHR11054 6 239 6.7E-33 T 25-04-2016 SMD_RS09125 359a92abdbe0c4e85f32e1ee89c42e05 241 Gene3D G3DSA:3.40.50.1360 7 224 4.4E-41 T 25-04-2016 SMD_RS09125 359a92abdbe0c4e85f32e1ee89c42e05 241 SUPERFAMILY SSF100950 12 225 1.38E-43 T 25-04-2016 SMD_RS06920 8071ad46cbff196c46bac5a84da88efb 435 Gene3D G3DSA:3.40.50.1820 108 412 1.1E-13 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06920 8071ad46cbff196c46bac5a84da88efb 435 SUPERFAMILY SSF53474 108 409 1.4E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS06920 8071ad46cbff196c46bac5a84da88efb 435 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 4.8E-189 T 25-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase SMD_RS06920 8071ad46cbff196c46bac5a84da88efb 435 Pfam PF06850 PHB de-polymerase C-terminus 211 411 6.6E-96 T 25-04-2016 IPR009656 PHB de-polymerase, C-terminal SMD_RS06920 8071ad46cbff196c46bac5a84da88efb 435 PIRSF PIRSF020818 1 425 1.2E-193 T 25-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 Gene3D G3DSA:1.10.3810.10 70 238 8.0E-57 T 25-04-2016 SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 Pfam PF00912 Transglycosylase 69 232 1.2E-46 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 PANTHER PTHR30400:SF0 1 246 4.1E-104 T 25-04-2016 SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 16 240 43.308 T 25-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 PANTHER PTHR30400 1 246 4.1E-104 T 25-04-2016 SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 29 237 2.0E-80 T 25-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SMD_RS16635 593c7432e66115b6562fa557d530d67a 246 SUPERFAMILY SSF53955 47 238 4.22E-59 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS18630 e556690478f8286a355600af97dc9367 255 SUPERFAMILY SSF56219 4 251 2.62E-32 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS18630 e556690478f8286a355600af97dc9367 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 5.8E-21 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS18630 e556690478f8286a355600af97dc9367 255 PANTHER PTHR14859 43 252 1.8E-40 T 25-04-2016 IPR027317 PGAP2-interacting protein SMD_RS18630 e556690478f8286a355600af97dc9367 255 Gene3D G3DSA:3.60.10.10 7 247 6.7E-7 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 PANTHER PTHR11098:SF16 2 390 7.0E-189 T 25-04-2016 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 SUPERFAMILY SSF51690 119 388 3.53E-88 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 164 390 2.1E-75 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 391 47.698 T 25-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 3 390 4.4E-139 T 25-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 SUPERFAMILY SSF54675 2 138 4.51E-45 T 25-04-2016 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 Gene3D G3DSA:3.20.140.10 2 373 2.7E-140 T 25-04-2016 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 PIRSF PIRSF000484 1 383 2.1E-69 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS03215 62797b79ad7b00811a6e136e180268e3 393 PANTHER PTHR11098 2 390 7.0E-189 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMD_RS00995 b9cfd817d8627c9251208a2d20016e2c 374 SUPERFAMILY SSF56112 44 333 3.21E-38 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS00995 b9cfd817d8627c9251208a2d20016e2c 374 Pfam PF01636 Phosphotransferase enzyme family 58 281 6.6E-24 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase SMD_RS00995 b9cfd817d8627c9251208a2d20016e2c 374 Gene3D G3DSA:3.90.1200.10 141 335 2.6E-27 T 25-04-2016 SMD_RS00995 b9cfd817d8627c9251208a2d20016e2c 374 Gene3D G3DSA:3.30.200.20 58 121 2.5E-4 T 25-04-2016 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 476 4.5E-76 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 SUPERFAMILY SSF56954 2 39 9.02E-90 T 25-04-2016 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 SUPERFAMILY SSF56954 75 476 9.02E-90 T 25-04-2016 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 Gene3D G3DSA:1.20.1600.10 75 476 2.8E-87 T 25-04-2016 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 Pfam PF02321 Outer membrane efflux protein 84 268 8.4E-24 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 Pfam PF02321 Outer membrane efflux protein 301 474 9.2E-19 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 PANTHER PTHR30203:SF13 1 476 7.1E-94 T 25-04-2016 SMD_RS07180 449963987f7be69a0af076ffcfa1aea5 479 PANTHER PTHR30203 1 476 7.1E-94 T 25-04-2016 SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 PANTHER PTHR13090:SF3 5 282 1.3E-114 T 25-04-2016 SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 8.2E-73 T 25-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 Gene3D G3DSA:3.40.50.150 39 266 1.7E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 PANTHER PTHR13090 5 282 1.3E-114 T 25-04-2016 SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 Pfam PF08241 Methyltransferase domain 51 147 2.0E-22 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 31.724 T 25-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 SMD_RS20870 2980030fe09889fec9863aeae8582e34 294 SUPERFAMILY SSF53335 10 260 5.52E-43 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS19650 35a79d4d1d0315238c5d1ca94bee2357 376 Pfam PF01476 LysM domain 33 78 2.3E-13 T 25-04-2016 IPR018392 LysM domain SMD_RS19650 35a79d4d1d0315238c5d1ca94bee2357 376 PANTHER PTHR34700 9 338 5.9E-61 T 25-04-2016 SMD_RS19650 35a79d4d1d0315238c5d1ca94bee2357 376 SMART SM00257 32 80 1.6E-7 T 25-04-2016 IPR018392 LysM domain SMD_RS19650 35a79d4d1d0315238c5d1ca94bee2357 376 PANTHER PTHR34700:SF2 9 338 5.9E-61 T 25-04-2016 SMD_RS19650 35a79d4d1d0315238c5d1ca94bee2357 376 Gene3D G3DSA:3.10.350.10 31 79 7.2E-10 T 25-04-2016 IPR018392 LysM domain SMD_RS19650 35a79d4d1d0315238c5d1ca94bee2357 376 SUPERFAMILY SSF54106 31 79 3.79E-8 T 25-04-2016 IPR018392 LysM domain SMD_RS12135 015e2abbe0e2f385ff20b5bab886e2b2 197 PANTHER PTHR30221 1 178 7.1E-42 T 25-04-2016 SMD_RS12135 015e2abbe0e2f385ff20b5bab886e2b2 197 SUPERFAMILY SSF50182 104 177 3.6E-9 T 25-04-2016 IPR010920 LSM domain SMD_RS12135 015e2abbe0e2f385ff20b5bab886e2b2 197 PANTHER PTHR30221:SF8 1 178 7.1E-42 T 25-04-2016 SMD_RS12135 015e2abbe0e2f385ff20b5bab886e2b2 197 Gene3D G3DSA:2.30.30.60 119 173 2.0E-7 T 25-04-2016 SMD_RS12135 015e2abbe0e2f385ff20b5bab886e2b2 197 Pfam PF00924 Mechanosensitive ion channel 62 172 1.7E-12 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMD_RS00490 e4efd81bf670eb2b8ec58361ba806ee3 373 SUPERFAMILY SSF56601 17 339 1.93E-77 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS00490 e4efd81bf670eb2b8ec58361ba806ee3 373 Gene3D G3DSA:3.40.710.10 5 343 2.1E-76 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS00490 e4efd81bf670eb2b8ec58361ba806ee3 373 Pfam PF00144 Beta-lactamase 23 337 1.0E-66 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS00490 e4efd81bf670eb2b8ec58361ba806ee3 373 PANTHER PTHR22935 1 349 1.5E-66 T 25-04-2016 SMD_RS05450 992688997a39aeee9333f3704d663a61 239 PANTHER PTHR24220 3 236 3.0E-138 T 25-04-2016 SMD_RS05450 992688997a39aeee9333f3704d663a61 239 Gene3D G3DSA:3.40.50.300 1 232 8.0E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05450 992688997a39aeee9333f3704d663a61 239 Pfam PF00005 ABC transporter 18 164 1.7E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS05450 992688997a39aeee9333f3704d663a61 239 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 239 9.1E-116 T 25-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SMD_RS05450 992688997a39aeee9333f3704d663a61 239 SUPERFAMILY SSF52540 2 234 1.59E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05450 992688997a39aeee9333f3704d663a61 239 PANTHER PTHR24220:SF497 3 236 3.0E-138 T 25-04-2016 SMD_RS05450 992688997a39aeee9333f3704d663a61 239 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 2.1E-6 T 25-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SMD_RS05450 992688997a39aeee9333f3704d663a61 239 SMART SM00382 26 214 2.4E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS21925 57c90510da9ccffaf5e11570b59fc8ad 475 PIRSF PIRSF006060 7 473 1.9E-81 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS21925 57c90510da9ccffaf5e11570b59fc8ad 475 PANTHER PTHR11785 3 136 7.0E-127 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS21925 57c90510da9ccffaf5e11570b59fc8ad 475 PANTHER PTHR11785 153 470 7.0E-127 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS21925 57c90510da9ccffaf5e11570b59fc8ad 475 Pfam PF13520 Amino acid permease 25 443 1.2E-55 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS21925 57c90510da9ccffaf5e11570b59fc8ad 475 PANTHER PTHR11785:SF328 3 136 7.0E-127 T 25-04-2016 SMD_RS21925 57c90510da9ccffaf5e11570b59fc8ad 475 PANTHER PTHR11785:SF328 153 470 7.0E-127 T 25-04-2016 SMD_RS14655 21d36dc6aa46713ed2341ad9f58f1812 282 Gene3D G3DSA:3.60.10.10 55 203 5.0E-9 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS14655 21d36dc6aa46713ed2341ad9f58f1812 282 SUPERFAMILY SSF56219 56 203 1.34E-12 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS14655 21d36dc6aa46713ed2341ad9f58f1812 282 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 53 198 3.6E-5 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS15875 f924550246c73781a27d76245c0f1650 931 PANTHER PTHR30069:SF7 28 295 9.8E-87 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 PANTHER PTHR30069 28 295 9.8E-87 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 PANTHER PTHR30069 319 789 9.8E-87 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 Gene3D G3DSA:2.170.130.10 40 183 9.1E-37 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 181 1.5E-27 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 SUPERFAMILY SSF56935 419 479 9.52E-104 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 SUPERFAMILY SSF56935 50 249 9.52E-104 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 SUPERFAMILY SSF56935 506 930 9.52E-104 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 SUPERFAMILY SSF56935 333 381 9.52E-104 T 25-04-2016 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 Gene3D G3DSA:2.40.170.20 184 247 4.3E-91 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 Gene3D G3DSA:2.40.170.20 314 930 4.3E-91 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 Pfam PF00593 TonB dependent receptor 605 929 1.2E-33 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15875 f924550246c73781a27d76245c0f1650 931 PANTHER PTHR30069:SF7 319 789 9.8E-87 T 25-04-2016 SMD_RS13185 b9e034ffd3bfd5e7b5edcdf80115033e 716 Pfam PF09977 Putative Tad-like Flp pilus-assembly 56 145 1.6E-10 T 25-04-2016 IPR018705 Domain of unknown function DUF2134, membrane SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432:SF18 310 336 7.0E-159 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432:SF18 359 589 7.0E-159 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432:SF18 25 65 7.0E-159 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432:SF18 96 276 7.0E-159 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432 310 336 7.0E-159 T 25-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432 359 589 7.0E-159 T 25-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432 25 65 7.0E-159 T 25-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 PANTHER PTHR21432 96 276 7.0E-159 T 25-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 Gene3D G3DSA:3.40.810.20 415 511 1.5E-4 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 SUPERFAMILY SSF100950 302 545 7.18E-40 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 SUPERFAMILY SSF100950 225 269 7.18E-40 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 367 531 3.1E-37 T 25-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 Gene3D G3DSA:3.30.750.70 225 270 9.3E-33 T 25-04-2016 SMD_RS17720 fe9fb3c8288e6205a5190cdc73255393 650 Gene3D G3DSA:3.30.750.70 305 383 9.3E-33 T 25-04-2016 SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 SUPERFAMILY SSF102712 2 98 1.2E-20 T 25-04-2016 SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 Gene3D G3DSA:3.40.140.10 2 130 5.4E-25 T 25-04-2016 SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 Pfam PF00877 NlpC/P60 family 125 239 5.9E-18 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 99 5.9E-18 T 25-04-2016 IPR028090 JAB domain, prokaryotic SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 PANTHER PTHR34858:SF1 1 245 7.2E-54 T 25-04-2016 SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 SMART SM00232 1 124 0.0018 T 25-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 SUPERFAMILY SSF54001 118 242 2.26E-16 T 25-04-2016 SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 Gene3D G3DSA:3.90.1720.10 131 242 2.6E-17 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS01460 e18dfb3d8c17b2cf9d734097c81c188f 246 PANTHER PTHR34858 1 245 7.2E-54 T 25-04-2016 SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 Gene3D G3DSA:3.10.129.10 9 119 4.6E-47 T 25-04-2016 IPR029069 HotDog domain SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 Gene3D G3DSA:3.10.129.10 128 288 6.1E-57 T 25-04-2016 IPR029069 HotDog domain SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 Pfam PF13622 Thioesterase-like superfamily 31 286 1.0E-60 T 25-04-2016 SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 SUPERFAMILY SSF54637 8 117 1.04E-39 T 25-04-2016 IPR029069 HotDog domain SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 16 287 1.5E-93 T 25-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 PANTHER PTHR11066 2 302 7.9E-118 T 25-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 SUPERFAMILY SSF54637 120 287 4.71E-56 T 25-04-2016 IPR029069 HotDog domain SMD_RS06205 99080e9bdd555b41301c49e98415e96b 302 PANTHER PTHR11066:SF34 2 302 7.9E-118 T 25-04-2016 SMD_RS13975 e411bf180306f0f1f545c626a5b289fd 195 PANTHER PTHR10204 1 194 1.2E-76 T 25-04-2016 SMD_RS13975 e411bf180306f0f1f545c626a5b289fd 195 PANTHER PTHR10204:SF37 1 194 1.2E-76 T 25-04-2016 SMD_RS13975 e411bf180306f0f1f545c626a5b289fd 195 Pfam PF02525 Flavodoxin-like fold 1 184 4.3E-48 T 25-04-2016 IPR003680 Flavodoxin-like fold SMD_RS13975 e411bf180306f0f1f545c626a5b289fd 195 SUPERFAMILY SSF52218 1 185 6.2E-52 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS13975 e411bf180306f0f1f545c626a5b289fd 195 Gene3D G3DSA:3.40.50.360 1 184 1.4E-61 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS13975 e411bf180306f0f1f545c626a5b289fd 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 194 30.193 T 25-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 SMD_RS17020 0ab7808ca527f8186805e8abc8e7cc5e 153 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 150 1.5E-28 T 25-04-2016 IPR006522 Phage virion morphogensis protein SMD_RS17020 0ab7808ca527f8186805e8abc8e7cc5e 153 Pfam PF05069 Phage virion morphogenesis family 4 151 6.5E-38 T 25-04-2016 IPR006522 Phage virion morphogensis protein SMD_RS08485 746b04fcb4ffd3a9d3bee2267ca271b5 121 PIRSF PIRSF030771 1 115 9.2E-15 T 25-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 SMD_RS08485 746b04fcb4ffd3a9d3bee2267ca271b5 121 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 113 6.0E-23 T 25-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 SMD_RS16660 a859563e68aa60ce027920d5aea28ac4 305 Gene3D G3DSA:3.40.50.1820 18 283 4.7E-51 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16660 a859563e68aa60ce027920d5aea28ac4 305 PANTHER PTHR10992 14 284 2.2E-45 T 25-04-2016 SMD_RS16660 a859563e68aa60ce027920d5aea28ac4 305 Pfam PF12146 Serine aminopeptidase, S33 33 269 3.3E-19 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMD_RS16660 a859563e68aa60ce027920d5aea28ac4 305 PANTHER PTHR10992:SF107 14 284 2.2E-45 T 25-04-2016 SMD_RS16660 a859563e68aa60ce027920d5aea28ac4 305 SUPERFAMILY SSF53474 7 283 2.89E-40 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS14725 32d0639488f765e15d25b91ef2819161 293 SUPERFAMILY SSF161098 54 280 7.46E-64 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS14725 32d0639488f765e15d25b91ef2819161 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 286 2.0E-18 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS14725 32d0639488f765e15d25b91ef2819161 293 Gene3D G3DSA:1.10.3720.10 60 290 8.7E-69 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS14725 32d0639488f765e15d25b91ef2819161 293 PANTHER PTHR30193 1 291 2.8E-119 T 25-04-2016 SMD_RS14725 32d0639488f765e15d25b91ef2819161 293 PANTHER PTHR30193:SF6 1 291 2.8E-119 T 25-04-2016 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 SUPERFAMILY SSF51905 29 252 1.46E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 SUPERFAMILY SSF51905 344 416 1.46E-45 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 Gene3D G3DSA:3.50.50.60 17 119 5.3E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 Gene3D G3DSA:3.50.50.60 344 401 5.3E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 Gene3D G3DSA:3.50.50.60 172 251 5.3E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 PANTHER PTHR13847 5 422 1.4E-171 T 25-04-2016 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 Pfam PF01266 FAD dependent oxidoreductase 30 380 7.5E-52 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMD_RS07375 f457e3cf733e54cad5ff4b343779dc7a 425 PANTHER PTHR13847:SF210 5 422 1.4E-171 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 PANTHER PTHR30069:SF7 305 640 5.9E-134 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 PANTHER PTHR30069:SF7 667 844 5.9E-134 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 PANTHER PTHR30069:SF7 17 282 5.9E-134 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Gene3D G3DSA:2.170.130.10 53 168 1.2E-33 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Pfam PF00593 TonB dependent receptor 596 945 5.6E-36 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 4.6E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 PANTHER PTHR30069 305 640 5.9E-134 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 PANTHER PTHR30069 667 844 5.9E-134 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 PANTHER PTHR30069 17 282 5.9E-134 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Gene3D G3DSA:2.40.170.20 169 237 5.4E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Gene3D G3DSA:2.40.170.20 301 341 5.4E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Gene3D G3DSA:2.40.170.20 377 422 5.4E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Gene3D G3DSA:2.40.170.20 658 949 5.4E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 Gene3D G3DSA:2.40.170.20 491 626 5.4E-93 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 SUPERFAMILY SSF56935 489 638 2.56E-102 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 SUPERFAMILY SSF56935 678 949 2.56E-102 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 SUPERFAMILY SSF56935 302 350 2.56E-102 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 SUPERFAMILY SSF56935 36 230 2.56E-102 T 25-04-2016 SMD_RS18200 0d408d733522e61e4ce7278735276192 949 SUPERFAMILY SSF56935 377 439 2.56E-102 T 25-04-2016 SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 Gene3D G3DSA:3.40.50.300 9 236 1.1E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 216 5.8E-53 T 25-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 PANTHER PTHR13748 390 430 1.1E-182 T 25-04-2016 SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 PANTHER PTHR13748 1 341 1.1E-182 T 25-04-2016 SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 PANTHER PTHR13748:SF4 390 430 1.1E-182 T 25-04-2016 SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 PANTHER PTHR13748:SF4 1 341 1.1E-182 T 25-04-2016 SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 Gene3D G3DSA:3.30.1220.10 250 327 3.8E-15 T 25-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 Gene3D G3DSA:3.30.1220.10 390 416 3.8E-15 T 25-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 263 416 3.4E-24 T 25-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 SMART SM00833 263 416 5.1E-39 T 25-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SMD_RS02435 83c46bc1a6662ddd74d8a34f07edafe2 441 SUPERFAMILY SSF52540 6 315 1.42E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00930 910710a351b025141f759fc3949d20af 410 Gene3D G3DSA:2.40.50.100 178 248 3.6E-12 T 25-04-2016 SMD_RS00930 910710a351b025141f759fc3949d20af 410 PANTHER PTHR30097:SF4 6 410 4.8E-68 T 25-04-2016 SMD_RS00930 910710a351b025141f759fc3949d20af 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 220 324 8.4E-16 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS00930 910710a351b025141f759fc3949d20af 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 166 218 6.6E-8 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS00930 910710a351b025141f759fc3949d20af 410 PANTHER PTHR30097 6 410 4.8E-68 T 25-04-2016 SMD_RS00930 910710a351b025141f759fc3949d20af 410 SUPERFAMILY SSF51230 187 252 1.02E-8 T 25-04-2016 IPR011053 Single hybrid motif SMD_RS16325 c115968b0461662340a21e732c526c53 549 PANTHER PTHR30443:SF0 14 547 2.7E-219 T 25-04-2016 SMD_RS16325 c115968b0461662340a21e732c526c53 549 SUPERFAMILY SSF53649 242 535 1.12E-18 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMD_RS16325 c115968b0461662340a21e732c526c53 549 Pfam PF08019 Domain of unknown function (DUF1705) 69 212 1.2E-45 T 25-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 SMD_RS16325 c115968b0461662340a21e732c526c53 549 Pfam PF00884 Sulfatase 246 531 9.7E-48 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMD_RS16325 c115968b0461662340a21e732c526c53 549 PANTHER PTHR30443 14 547 2.7E-219 T 25-04-2016 SMD_RS16325 c115968b0461662340a21e732c526c53 549 Gene3D G3DSA:3.40.720.10 391 535 6.5E-11 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMD_RS18125 625dbbf04241e3a17569d52ab9c64021 675 PIRSF PIRSF001265 2 675 1.3E-264 T 25-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SMD_RS18125 625dbbf04241e3a17569d52ab9c64021 675 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 13 675 5.3E-267 T 25-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SMD_RS18125 625dbbf04241e3a17569d52ab9c64021 675 Pfam PF03030 Inorganic H+ pyrophosphatase 15 670 1.4E-270 T 25-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SMD_RS18125 625dbbf04241e3a17569d52ab9c64021 675 PANTHER PTHR31998 9 675 0.0 T 25-04-2016 SMD_RS18125 625dbbf04241e3a17569d52ab9c64021 675 PANTHER PTHR31998:SF0 9 675 0.0 T 25-04-2016 SMD_RS18125 625dbbf04241e3a17569d52ab9c64021 675 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 675 25.581 T 25-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SMD_RS07720 a3268ecb6232928ea670dc29f9d1cade 156 Pfam PF01609 Transposase DDE domain 1 152 2.3E-23 T 25-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SMD_RS07720 a3268ecb6232928ea670dc29f9d1cade 156 PANTHER PTHR30007:SF0 1 156 6.6E-29 T 25-04-2016 SMD_RS07720 a3268ecb6232928ea670dc29f9d1cade 156 PANTHER PTHR30007 1 156 6.6E-29 T 25-04-2016 SMD_RS01015 a3268ecb6232928ea670dc29f9d1cade 156 Pfam PF01609 Transposase DDE domain 1 152 2.3E-23 T 25-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SMD_RS01015 a3268ecb6232928ea670dc29f9d1cade 156 PANTHER PTHR30007:SF0 1 156 6.6E-29 T 25-04-2016 SMD_RS01015 a3268ecb6232928ea670dc29f9d1cade 156 PANTHER PTHR30007 1 156 6.6E-29 T 25-04-2016 SMD_RS08265 a3268ecb6232928ea670dc29f9d1cade 156 Pfam PF01609 Transposase DDE domain 1 152 2.3E-23 T 25-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SMD_RS08265 a3268ecb6232928ea670dc29f9d1cade 156 PANTHER PTHR30007:SF0 1 156 6.6E-29 T 25-04-2016 SMD_RS08265 a3268ecb6232928ea670dc29f9d1cade 156 PANTHER PTHR30007 1 156 6.6E-29 T 25-04-2016 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 SUPERFAMILY SSF100950 3 209 1.4E-71 T 25-04-2016 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 6.2E-100 T 25-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 25-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 SMART SM00882 6 202 3.5E-76 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 PANTHER PTHR13707 2 208 4.7E-134 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 Pfam PF01144 Coenzyme A transferase 7 198 2.1E-41 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SMD_RS03015 7565fb00871b06fa6d22806915b11320 210 Gene3D G3DSA:3.40.810.20 3 208 1.9E-92 T 25-04-2016 SMD_RS17570 c6c89fc7913293ebd5c6ca9ce62ccee7 238 PANTHER PTHR11820:SF87 28 237 3.1E-123 T 25-04-2016 SMD_RS17570 c6c89fc7913293ebd5c6ca9ce62ccee7 238 SUPERFAMILY SSF56529 24 230 6.8E-64 T 25-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMD_RS17570 c6c89fc7913293ebd5c6ca9ce62ccee7 238 Gene3D G3DSA:3.90.850.10 24 230 5.6E-72 T 25-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMD_RS17570 c6c89fc7913293ebd5c6ca9ce62ccee7 238 PANTHER PTHR11820 28 237 3.1E-123 T 25-04-2016 SMD_RS17570 c6c89fc7913293ebd5c6ca9ce62ccee7 238 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 231 1.9E-54 T 25-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMD_RS00640 2a99afedf4c267a386196a0252f755b6 203 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 195 2.0E-26 T 25-04-2016 IPR005247 YbhB/YbcL SMD_RS00640 2a99afedf4c267a386196a0252f755b6 203 SUPERFAMILY SSF49777 1 198 1.57E-41 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SMD_RS00640 2a99afedf4c267a386196a0252f755b6 203 PANTHER PTHR30289 1 202 1.9E-48 T 25-04-2016 SMD_RS00640 2a99afedf4c267a386196a0252f755b6 203 Gene3D G3DSA:3.90.280.10 1 202 1.4E-60 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SMD_RS00640 2a99afedf4c267a386196a0252f755b6 203 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 196 3.6E-39 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 Gene3D G3DSA:2.60.40.420 446 579 1.3E-29 T 25-04-2016 IPR008972 Cupredoxin SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 Gene3D G3DSA:2.60.40.420 5 120 8.8E-35 T 25-04-2016 IPR008972 Cupredoxin SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 SUPERFAMILY SSF49503 128 342 1.22E-52 T 25-04-2016 IPR008972 Cupredoxin SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 ProSitePatterns PS00079 Multicopper oxidases signature 1. 97 117 - T 25-04-2016 IPR033138 Multicopper oxidases, conserved site SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 Pfam PF07731 Multicopper oxidase 466 579 1.9E-22 T 25-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 Gene3D G3DSA:2.60.40.420 129 330 1.8E-48 T 25-04-2016 IPR008972 Cupredoxin SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 ProSitePatterns PS00079 Multicopper oxidases signature 1. 557 577 - T 25-04-2016 IPR033138 Multicopper oxidases, conserved site SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 PANTHER PTHR11709:SF33 7 166 1.1E-99 T 25-04-2016 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 PANTHER PTHR11709:SF33 207 319 1.1E-99 T 25-04-2016 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 PANTHER PTHR11709:SF33 430 579 1.1E-99 T 25-04-2016 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 SUPERFAMILY SSF49503 419 579 1.13E-33 T 25-04-2016 IPR008972 Cupredoxin SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 Pfam PF00394 Multicopper oxidase 132 309 2.5E-28 T 25-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 SUPERFAMILY SSF49503 6 143 1.03E-40 T 25-04-2016 IPR008972 Cupredoxin SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 Pfam PF07732 Multicopper oxidase 13 122 3.1E-40 T 25-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 1 579 1.6E-281 T 25-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 PANTHER PTHR11709 7 166 1.1E-99 T 25-04-2016 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 PANTHER PTHR11709 207 319 1.1E-99 T 25-04-2016 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 PANTHER PTHR11709 430 579 1.1E-99 T 25-04-2016 SMD_RS07800 15ec6da3354ef710b9492643181b4509 580 ProSitePatterns PS00080 Multicopper oxidases signature 2. 562 573 - T 25-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 SMD_RS14155 29387ed6bc6f013347beb811716698b1 476 Pfam PF00144 Beta-lactamase 160 461 2.9E-67 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS14155 29387ed6bc6f013347beb811716698b1 476 PANTHER PTHR22935 149 474 2.0E-73 T 25-04-2016 SMD_RS14155 29387ed6bc6f013347beb811716698b1 476 SUPERFAMILY SSF56601 148 472 5.81E-84 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS14155 29387ed6bc6f013347beb811716698b1 476 Gene3D G3DSA:3.40.710.10 166 470 5.2E-85 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 PANTHER PTHR41251 2 306 1.6E-103 T 25-04-2016 SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 SUPERFAMILY SSF100939 2 268 2.75E-48 T 25-04-2016 IPR016194 SPOC-like, C-terminal domain SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 266 1.5E-95 T 25-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 Gene3D G3DSA:2.40.290.10 7 157 3.1E-10 T 25-04-2016 IPR016194 SPOC-like, C-terminal domain SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 30.467 T 25-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 PIRSF PIRSF006493 1 302 6.1E-85 T 25-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 PANTHER PTHR41251:SF1 2 306 1.6E-103 T 25-04-2016 SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 178 2.9E-29 T 25-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 SMD_RS00235 37e53b6bfdf7897d62ac841e10532924 306 SMART SM00559 53 181 8.5E-23 T 25-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 SMD_RS10955 6305cf00aa83bf2ff81671323d671f00 227 PANTHER PTHR30435:SF15 19 227 1.9E-55 T 25-04-2016 SMD_RS10955 6305cf00aa83bf2ff81671323d671f00 227 Pfam PF13861 FlgD Tudor-like domain 90 223 4.9E-15 T 25-04-2016 IPR025963 FlgD Tudor-like domain SMD_RS10955 6305cf00aa83bf2ff81671323d671f00 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 81 2.3E-24 T 25-04-2016 IPR005648 Flagellar hook capping protein SMD_RS10955 6305cf00aa83bf2ff81671323d671f00 227 Pfam PF13860 FlgD Ig-like domain 114 180 2.3E-15 T 25-04-2016 IPR025965 FlgD Ig-like domain SMD_RS10955 6305cf00aa83bf2ff81671323d671f00 227 PANTHER PTHR30435 19 227 1.9E-55 T 25-04-2016 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 Gene3D G3DSA:3.50.50.60 22 118 1.3E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 Gene3D G3DSA:3.50.50.60 329 384 1.3E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 Gene3D G3DSA:3.50.50.60 167 244 1.3E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 PRINTS PR00162 Rieske 2Fe-2S subunit signature 447 458 1.6E-6 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 PRINTS PR00162 Rieske 2Fe-2S subunit signature 480 492 1.6E-6 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 PRINTS PR00162 Rieske 2Fe-2S subunit signature 468 480 1.6E-6 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 SUPERFAMILY SSF50022 418 494 2.62E-24 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 Gene3D G3DSA:2.102.10.10 414 494 1.3E-26 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 Pfam PF01266 FAD dependent oxidoreductase 30 366 5.3E-30 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 Pfam PF00355 Rieske [2Fe-2S] domain 419 491 7.0E-15 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 PANTHER PTHR13847 4 384 1.1E-20 T 25-04-2016 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 SUPERFAMILY SSF51905 29 245 1.3E-27 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS11560 257cf6ed70e78ad41244dd6dfb4452cc 497 SUPERFAMILY SSF51905 329 388 1.3E-27 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS15430 9885671541a5cd3be3f30336ab2af3fb 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.927 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMD_RS15430 9885671541a5cd3be3f30336ab2af3fb 101 PANTHER PTHR11434 3 101 8.1E-40 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMD_RS15430 9885671541a5cd3be3f30336ab2af3fb 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 2.4E-24 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMD_RS19800 132cb554f2d22fca22f166a5fc6bd597 309 SUPERFAMILY SSF50630 25 137 8.91E-6 T 25-04-2016 IPR021109 Aspartic peptidase domain SMD_RS19800 132cb554f2d22fca22f166a5fc6bd597 309 Pfam PF13650 Aspartyl protease 36 132 1.6E-10 T 25-04-2016 SMD_RS19800 132cb554f2d22fca22f166a5fc6bd597 309 Pfam PF13650 Aspartyl protease 194 285 2.4E-7 T 25-04-2016 SMD_RS04915 0c4b6ebfab885a78449f51d119d89af6 233 SUPERFAMILY SSF54427 92 225 2.06E-29 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS04915 0c4b6ebfab885a78449f51d119d89af6 233 Pfam PF04335 VirB8 protein 23 224 1.1E-67 T 25-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 SMD_RS12530 01323e108d10824a3267090de1e9772a 226 Pfam PF00857 Isochorismatase family 20 172 3.8E-19 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS12530 01323e108d10824a3267090de1e9772a 226 PANTHER PTHR14119 14 209 5.9E-137 T 25-04-2016 SMD_RS12530 01323e108d10824a3267090de1e9772a 226 PANTHER PTHR14119:SF10 14 209 5.9E-137 T 25-04-2016 SMD_RS12530 01323e108d10824a3267090de1e9772a 226 Gene3D G3DSA:3.40.50.850 13 211 8.7E-44 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS12530 01323e108d10824a3267090de1e9772a 226 SUPERFAMILY SSF52499 12 210 1.7E-46 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS15560 1206b3efdd695545426893c90c7dc495 1795 SUPERFAMILY SSF52540 1293 1443 1.0E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15560 1206b3efdd695545426893c90c7dc495 1795 SUPERFAMILY SSF52540 1238 1256 1.0E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15560 1206b3efdd695545426893c90c7dc495 1795 Pfam PF07728 AAA domain (dynein-related subfamily) 1298 1424 1.3E-5 T 25-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SMD_RS15560 1206b3efdd695545426893c90c7dc495 1795 Gene3D G3DSA:3.40.50.300 1287 1439 1.3E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15560 1206b3efdd695545426893c90c7dc495 1795 Pfam PF12458 ATPase involved in DNA repair 44 491 3.7E-190 T 25-04-2016 IPR020958 DUF3686 SMD_RS16360 37e2e1159fe1fa95cca40388b33f56cc 455 Pfam PF00324 Amino acid permease 22 420 4.0E-93 T 25-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SMD_RS16360 37e2e1159fe1fa95cca40388b33f56cc 455 PANTHER PTHR11785:SF386 13 455 1.1E-226 T 25-04-2016 SMD_RS16360 37e2e1159fe1fa95cca40388b33f56cc 455 PANTHER PTHR11785 13 455 1.1E-226 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS16360 37e2e1159fe1fa95cca40388b33f56cc 455 PIRSF PIRSF006060 7 449 1.2E-71 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS16360 37e2e1159fe1fa95cca40388b33f56cc 455 ProSitePatterns PS00218 Amino acid permeases signature. 46 76 - T 25-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SMD_RS15975 72021aaefb8bc26e32fbba77879f9d51 356 Gene3D G3DSA:3.40.710.10 41 353 1.7E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS15975 72021aaefb8bc26e32fbba77879f9d51 356 Pfam PF00144 Beta-lactamase 33 341 6.2E-74 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS15975 72021aaefb8bc26e32fbba77879f9d51 356 SUPERFAMILY SSF56601 32 354 7.22E-93 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS15975 72021aaefb8bc26e32fbba77879f9d51 356 PANTHER PTHR22935 29 355 1.9E-79 T 25-04-2016 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 SMART SM00354 1 71 5.6E-26 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 Gene3D G3DSA:3.40.50.2300 176 310 2.2E-51 T 25-04-2016 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 SUPERFAMILY SSF47413 1 59 1.69E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 Gene3D G3DSA:3.40.50.2300 52 175 1.7E-42 T 25-04-2016 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 Gene3D G3DSA:1.10.260.40 1 51 1.1E-22 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 PANTHER PTHR30146 1 332 6.8E-114 T 25-04-2016 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.6E-15 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 SUPERFAMILY SSF53822 62 332 1.56E-74 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS05870 70f5c0ecf6fa2d0061f84d79e6839b10 335 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.5E-39 T 25-04-2016 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 SUPERFAMILY SSF55205 1 422 6.67E-142 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 421 5.9E-178 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 412 4.6E-112 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 PANTHER PTHR21090 1 423 1.4E-206 T 25-04-2016 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 Gene3D G3DSA:3.65.10.10 21 225 1.2E-63 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 422 47.095 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS05480 0868552e5711708b3e565d72a8e6f4a5 423 Gene3D G3DSA:3.65.10.10 226 421 5.3E-62 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMD_RS10385 aec402617c09cff2e6dbb3850d5e28bb 185 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.885 T 25-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 SMD_RS10385 aec402617c09cff2e6dbb3850d5e28bb 185 Gene3D G3DSA:2.60.120.10 4 179 3.4E-57 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS10385 aec402617c09cff2e6dbb3850d5e28bb 185 SUPERFAMILY SSF51182 3 179 7.59E-42 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS10385 aec402617c09cff2e6dbb3850d5e28bb 185 PANTHER PTHR23418 24 179 1.2E-37 T 25-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 SMD_RS10385 aec402617c09cff2e6dbb3850d5e28bb 185 Pfam PF03079 ARD/ARD' family 3 164 2.7E-33 T 25-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 SMD_RS03715 f8766fa0556a2acf57051a8c7bf6c7cb 164 PANTHER PTHR30373 1 164 1.4E-51 T 25-04-2016 SMD_RS03715 f8766fa0556a2acf57051a8c7bf6c7cb 164 PANTHER PTHR30373:SF3 1 164 1.4E-51 T 25-04-2016 SMD_RS03715 f8766fa0556a2acf57051a8c7bf6c7cb 164 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 18 138 3.4E-10 T 25-04-2016 IPR007621 TPM domain SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 Gene3D G3DSA:1.20.1330.10 276 326 3.4E-18 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 Gene3D G3DSA:1.20.1330.10 58 177 3.4E-18 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 397 5.6E-5 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 PANTHER PTHR30244 3 188 3.5E-77 T 25-04-2016 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 PANTHER PTHR30244 225 397 3.5E-77 T 25-04-2016 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.4E-99 T 25-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.2E-20 T 25-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 SUPERFAMILY SSF64518 1 400 9.29E-72 T 25-04-2016 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 PANTHER PTHR30244:SF5 3 188 3.5E-77 T 25-04-2016 SMD_RS10915 6cc54554af116ce5e14f47c97cdd8afe 400 PANTHER PTHR30244:SF5 225 397 3.5E-77 T 25-04-2016 SMD_RS18300 e7e12ec270b70dfa3a79cbaccf25bb89 376 SUPERFAMILY SSF111369 47 259 3.53E-25 T 25-04-2016 SMD_RS18300 e7e12ec270b70dfa3a79cbaccf25bb89 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 259 1.5E-20 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS18300 e7e12ec270b70dfa3a79cbaccf25bb89 376 Gene3D G3DSA:2.40.50.100 61 90 1.7E-17 T 25-04-2016 SMD_RS18300 e7e12ec270b70dfa3a79cbaccf25bb89 376 Gene3D G3DSA:2.40.50.100 165 196 1.7E-17 T 25-04-2016 SMD_RS18300 e7e12ec270b70dfa3a79cbaccf25bb89 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 352 1.7E-69 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS18300 e7e12ec270b70dfa3a79cbaccf25bb89 376 PANTHER PTHR30469 3 365 1.4E-72 T 25-04-2016 SMD_RS15915 80f3bcc50d8eabebed95b639cfcfec3e 191 PANTHER PTHR38098 1 188 1.9E-43 T 25-04-2016 SMD_RS15915 80f3bcc50d8eabebed95b639cfcfec3e 191 Pfam PF04390 Lipopolysaccharide-assembly 8 158 5.5E-14 T 25-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SMD_RS15915 80f3bcc50d8eabebed95b639cfcfec3e 191 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 2 163 22.752 T 25-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SMD_RS15915 80f3bcc50d8eabebed95b639cfcfec3e 191 PANTHER PTHR38098:SF1 1 188 1.9E-43 T 25-04-2016 SMD_RS15915 80f3bcc50d8eabebed95b639cfcfec3e 191 Gene3D G3DSA:3.30.160.150 17 168 2.5E-38 T 25-04-2016 SMD_RS09990 3e07caae5cf05ab47fb9ff14f08ffa35 193 Gene3D G3DSA:3.40.50.360 2 175 4.8E-31 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS09990 3e07caae5cf05ab47fb9ff14f08ffa35 193 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 179 1.6E-67 T 25-04-2016 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 SMD_RS09990 3e07caae5cf05ab47fb9ff14f08ffa35 193 Pfam PF03358 NADPH-dependent FMN reductase 6 152 1.3E-28 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMD_RS09990 3e07caae5cf05ab47fb9ff14f08ffa35 193 PANTHER PTHR30543 1 175 2.5E-65 T 25-04-2016 SMD_RS09990 3e07caae5cf05ab47fb9ff14f08ffa35 193 SUPERFAMILY SSF52218 1 178 5.24E-29 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS09990 3e07caae5cf05ab47fb9ff14f08ffa35 193 PANTHER PTHR30543:SF8 1 175 2.5E-65 T 25-04-2016 SMD_RS08060 53fb3c1fc3461073bfed17ea50a786aa 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMD_RS08060 53fb3c1fc3461073bfed17ea50a786aa 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 1.3E-8 T 25-04-2016 SMD_RS08060 53fb3c1fc3461073bfed17ea50a786aa 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 1.3E-8 T 25-04-2016 SMD_RS08060 53fb3c1fc3461073bfed17ea50a786aa 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 1.3E-8 T 25-04-2016 SMD_RS08060 53fb3c1fc3461073bfed17ea50a786aa 369 Gene3D G3DSA:3.40.50.150 21 172 1.8E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08060 53fb3c1fc3461073bfed17ea50a786aa 369 SUPERFAMILY SSF53335 18 191 2.11E-22 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS16880 0008059097c6b4ebac439e0a98261bea 255 Pfam PF02517 CAAX protease self-immunity 114 211 5.4E-8 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SMD_RS10145 ff567b39ecbf3a9998b2ae876d6274b2 186 PANTHER PTHR13256 1 186 2.6E-25 T 25-04-2016 SMD_RS10145 ff567b39ecbf3a9998b2ae876d6274b2 186 Gene3D G3DSA:3.40.630.30 2 178 1.4E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10145 ff567b39ecbf3a9998b2ae876d6274b2 186 SUPERFAMILY SSF55729 1 155 4.58E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10145 ff567b39ecbf3a9998b2ae876d6274b2 186 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 5.2E-24 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS19035 16095724bd735e902d37d12174ef0580 188 Pfam PF07209 Protein of unknown function (DUF1415) 12 179 7.0E-69 T 25-04-2016 IPR009858 Protein of unknown function DUF1415 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 Pfam PF00970 Oxidoreductase FAD-binding domain 52 132 7.9E-10 T 25-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 PRINTS PR00406 Cytochrome B5 reductase signature 84 91 7.3E-7 T 25-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 PRINTS PR00406 Cytochrome B5 reductase signature 63 74 7.3E-7 T 25-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 PRINTS PR00406 Cytochrome B5 reductase signature 230 238 7.3E-7 T 25-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 PRINTS PR00406 Cytochrome B5 reductase signature 140 159 7.3E-7 T 25-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 Gene3D G3DSA:3.10.20.30 259 355 4.7E-20 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 Gene3D G3DSA:3.40.50.80 136 258 3.5E-27 T 25-04-2016 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 279 349 3.2E-7 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 SUPERFAMILY SSF52343 131 260 1.83E-27 T 25-04-2016 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 Gene3D G3DSA:2.40.30.10 39 128 1.2E-13 T 25-04-2016 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 SUPERFAMILY SSF63380 30 133 2.92E-16 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 Pfam PF00175 Oxidoreductase NAD-binding domain 141 244 1.2E-12 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 SUPERFAMILY SSF54292 254 356 4.33E-20 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMD_RS12995 b4e114ea64b0db4837c930ba5c33ab61 356 PANTHER PTHR19370 28 247 7.0E-38 T 25-04-2016 SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 47 277 7.1E-42 T 25-04-2016 IPR005519 Acid phosphatase, class B-like SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 SUPERFAMILY SSF56784 76 285 5.47E-31 T 25-04-2016 IPR023214 HAD-like domain SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 PANTHER PTHR31284 263 279 8.0E-83 T 25-04-2016 SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 PANTHER PTHR31284 48 245 8.0E-83 T 25-04-2016 SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 PANTHER PTHR31284:SF10 263 279 8.0E-83 T 25-04-2016 SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 PANTHER PTHR31284:SF10 48 245 8.0E-83 T 25-04-2016 SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 Gene3D G3DSA:3.40.50.1000 60 287 8.6E-45 T 25-04-2016 IPR023214 HAD-like domain SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 PIRSF PIRSF019271 3 306 1.1E-94 T 25-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SMD_RS00395 f7b98d6c019a6d00e9e1b5675f7bb614 307 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 15 303 7.6E-66 T 25-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SMD_RS14755 d26ed06bffe17362cd984c7208358d5c 99 Pfam PF03795 YCII-related domain 2 95 2.0E-23 T 25-04-2016 IPR005545 YCII-related SMD_RS14755 d26ed06bffe17362cd984c7208358d5c 99 PANTHER PTHR33606 1 98 2.0E-28 T 25-04-2016 SMD_RS14755 d26ed06bffe17362cd984c7208358d5c 99 SUPERFAMILY SSF54909 2 97 1.5E-29 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS14755 d26ed06bffe17362cd984c7208358d5c 99 Gene3D G3DSA:3.30.70.1060 2 98 1.5E-33 T 25-04-2016 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.5E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.5E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.5E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 Gene3D G3DSA:1.10.1660.10 55 130 2.9E-32 T 25-04-2016 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 PANTHER PTHR30204:SF16 1 126 3.5E-55 T 25-04-2016 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 SUPERFAMILY SSF46955 1 126 5.13E-40 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 PANTHER PTHR30204 1 126 3.5E-55 T 25-04-2016 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 5.6E-52 T 25-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 Pfam PF09278 MerR, DNA binding 45 108 4.4E-20 T 25-04-2016 IPR015358 Transcription regulator MerR, DNA binding SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 Pfam PF00376 MerR family regulatory protein 2 39 5.5E-17 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 Gene3D G3DSA:1.10.1660.10 1 54 5.7E-27 T 25-04-2016 SMD_RS10335 7b49a75fc960feb728a8a38d35e8b7bf 151 SMART SM00422 1 70 6.1E-34 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS01790 9b6599aa155e89acee3aa3cfa0560b59 413 Pfam PF07690 Major Facilitator Superfamily 35 310 2.9E-25 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS01790 9b6599aa155e89acee3aa3cfa0560b59 413 SUPERFAMILY SSF103473 19 403 4.05E-49 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS01790 9b6599aa155e89acee3aa3cfa0560b59 413 PANTHER PTHR23501 22 412 4.4E-150 T 25-04-2016 SMD_RS01790 9b6599aa155e89acee3aa3cfa0560b59 413 Gene3D G3DSA:1.20.1250.20 26 200 5.0E-20 T 25-04-2016 SMD_RS01790 9b6599aa155e89acee3aa3cfa0560b59 413 Gene3D G3DSA:1.20.1250.20 235 400 3.8E-11 T 25-04-2016 SMD_RS01790 9b6599aa155e89acee3aa3cfa0560b59 413 PANTHER PTHR23501:SF79 22 412 4.4E-150 T 25-04-2016 SMD_RS07745 79683677dd89a77de3efe77c44053bae 107 PANTHER PTHR33215:SF3 1 106 2.5E-22 T 25-04-2016 SMD_RS07745 79683677dd89a77de3efe77c44053bae 107 Gene3D G3DSA:1.10.10.60 8 94 7.9E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS07745 79683677dd89a77de3efe77c44053bae 107 Pfam PF01527 Transposase 1 86 1.4E-7 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMD_RS07745 79683677dd89a77de3efe77c44053bae 107 PANTHER PTHR33215 1 106 2.5E-22 T 25-04-2016 SMD_RS07745 79683677dd89a77de3efe77c44053bae 107 SUPERFAMILY SSF46689 4 98 2.87E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12950 a79f0f491db44c46341287726433d44c 398 Pfam PF07690 Major Facilitator Superfamily 17 248 2.1E-20 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS12950 a79f0f491db44c46341287726433d44c 398 PANTHER PTHR23546:SF1 10 385 1.1E-57 T 25-04-2016 SMD_RS12950 a79f0f491db44c46341287726433d44c 398 PANTHER PTHR23546 10 385 1.1E-57 T 25-04-2016 SMD_RS12950 a79f0f491db44c46341287726433d44c 398 Gene3D G3DSA:1.20.1250.20 215 392 5.8E-17 T 25-04-2016 SMD_RS12950 a79f0f491db44c46341287726433d44c 398 Gene3D G3DSA:1.20.1250.20 12 198 2.9E-26 T 25-04-2016 SMD_RS12950 a79f0f491db44c46341287726433d44c 398 SUPERFAMILY SSF103473 11 396 2.75E-49 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS17380 465a030cb02c0bb96eb10a33f13891b8 593 Gene3D G3DSA:1.50.10.10 218 589 1.3E-87 T 25-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMD_RS17380 465a030cb02c0bb96eb10a33f13891b8 593 PANTHER PTHR31616:SF2 5 591 7.9E-160 T 25-04-2016 SMD_RS17380 465a030cb02c0bb96eb10a33f13891b8 593 SUPERFAMILY SSF48208 205 590 2.95E-94 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS17380 465a030cb02c0bb96eb10a33f13891b8 593 Pfam PF00723 Glycosyl hydrolases family 15 221 582 8.4E-29 T 25-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 SMD_RS17380 465a030cb02c0bb96eb10a33f13891b8 593 PANTHER PTHR31616 5 591 7.9E-160 T 25-04-2016 SMD_RS09155 7f67cad9761fca63457732c21f2db5d4 128 Gene3D G3DSA:1.20.1300.10 11 120 5.9E-27 T 25-04-2016 SMD_RS09155 7f67cad9761fca63457732c21f2db5d4 128 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 17 120 2.2E-27 T 25-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SMD_RS09155 7f67cad9761fca63457732c21f2db5d4 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 116 1.9E-15 T 25-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SMD_RS09155 7f67cad9761fca63457732c21f2db5d4 128 SUPERFAMILY SSF81343 12 122 3.27E-25 T 25-04-2016 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 SUPERFAMILY SSF51206 27 162 1.57E-24 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 Pfam PF13545 Crp-like helix-turn-helix domain 169 243 6.8E-19 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 Pfam PF00027 Cyclic nucleotide-binding domain 53 133 1.3E-10 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 PANTHER PTHR24567:SF28 27 247 4.8E-74 T 25-04-2016 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 PANTHER PTHR24567 27 247 4.8E-74 T 25-04-2016 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 210 225 3.1E-11 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 210 3.1E-11 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 SUPERFAMILY SSF46785 168 246 9.27E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 SMART SM00100 34 152 8.8E-11 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 SMART SM00419 188 237 2.6E-14 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 Gene3D G3DSA:2.60.120.10 24 172 3.0E-21 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS10240 890f8ac488bceed0293595fb7b708828 250 Gene3D G3DSA:1.10.10.10 173 246 1.5E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 PANTHER PTHR22935 39 237 9.0E-67 T 25-04-2016 SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 PANTHER PTHR22935:SF67 39 237 9.0E-67 T 25-04-2016 SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 Pfam PF01427 D-ala-D-ala dipeptidase 35 226 4.0E-37 T 25-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 Gene3D G3DSA:3.30.1380.10 36 236 1.0E-68 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 37 235 30.335 T 25-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 SUPERFAMILY SSF55166 36 235 5.89E-59 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMD_RS02195 714402f78af2891a64b153de09a79fa6 237 PIRSF PIRSF026671 6 237 3.6E-68 T 25-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 SMD_RS12280 da9c47d1339a8d05834e0381b4d6a552 392 PANTHER PTHR36840:SF1 9 379 4.2E-52 T 25-04-2016 SMD_RS12280 da9c47d1339a8d05834e0381b4d6a552 392 PANTHER PTHR36840 9 379 4.2E-52 T 25-04-2016 SMD_RS12280 da9c47d1339a8d05834e0381b4d6a552 392 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 19 376 2.6E-104 T 25-04-2016 IPR010640 Low temperature requirement A SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 SUPERFAMILY SSF56059 3 385 1.29E-102 T 25-04-2016 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 SUPERFAMILY SSF51621 462 789 7.33E-97 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 8.7E-112 T 25-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Gene3D G3DSA:3.30.470.20 199 352 8.5E-56 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 25-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 789 0.0 T 25-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 PANTHER PTHR22931:SF7 2 791 0.0 T 25-04-2016 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 SUPERFAMILY SSF52009 351 464 1.31E-32 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 788 4.6E-62 T 25-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 8.5E-6 T 25-04-2016 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 8.5E-6 T 25-04-2016 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 8.5E-6 T 25-04-2016 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Gene3D G3DSA:3.30.1490.20 3 194 1.3E-66 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Gene3D G3DSA:3.20.20.60 481 789 1.5E-105 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Gene3D G3DSA:3.50.30.10 373 469 4.0E-34 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 PANTHER PTHR22931 2 791 0.0 T 25-04-2016 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 PIRSF PIRSF000854 1 792 0.0 T 25-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 5.8E-25 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMD_RS13665 c7e1a181810c7f13ee3d06e2147db1ff 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 25-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SMD_RS04070 4b943e5130223554b677e301c76e0616 337 Gene3D G3DSA:3.40.50.880 55 288 3.2E-22 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS04070 4b943e5130223554b677e301c76e0616 337 Pfam PF03575 Peptidase family S51 119 174 1.2E-10 T 25-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 SMD_RS04070 4b943e5130223554b677e301c76e0616 337 PANTHER PTHR36175 21 312 1.4E-25 T 25-04-2016 SMD_RS04070 4b943e5130223554b677e301c76e0616 337 SUPERFAMILY SSF52317 57 279 7.01E-20 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 2.4E-5 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 109 134 2.4E-5 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 2.4E-5 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 PANTHER PTHR30413:SF2 10 263 4.7E-149 T 25-04-2016 SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 PANTHER PTHR30413 10 263 4.7E-149 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 PIRSF PIRSF006648 1 260 1.4E-26 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS21110 4e0f3a58c9a24a5c16768df7a4178056 263 Pfam PF01061 ABC-2 type transporter 16 225 3.5E-35 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SMD_RS01155 4339938095e2704fcdf17d5811baff68 143 Gene3D G3DSA:3.30.160.200 8 112 3.5E-32 T 25-04-2016 SMD_RS01155 4339938095e2704fcdf17d5811baff68 143 SUPERFAMILY SSF110916 9 99 5.62E-12 T 25-04-2016 SMD_RS01155 4339938095e2704fcdf17d5811baff68 143 Pfam PF00472 RF-1 domain 10 137 2.7E-23 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMD_RS01155 4339938095e2704fcdf17d5811baff68 143 PANTHER PTHR11075 9 141 7.0E-42 T 25-04-2016 SMD_RS01155 4339938095e2704fcdf17d5811baff68 143 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMD_RS18435 12e02cbceac5767221ad4bc5456fc810 205 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 188 4.4E-23 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS18435 12e02cbceac5767221ad4bc5456fc810 205 Gene3D G3DSA:3.40.50.1110 4 196 7.2E-27 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS18435 12e02cbceac5767221ad4bc5456fc810 205 SUPERFAMILY SSF52266 4 195 1.53E-28 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS05145 255c777f191a1c449e1af05fb18f4272 64 SUPERFAMILY SSF57829 2 55 1.1E-18 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMD_RS05145 255c777f191a1c449e1af05fb18f4272 64 Pfam PF01783 Ribosomal L32p protein family 2 55 3.6E-21 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMD_RS05145 255c777f191a1c449e1af05fb18f4272 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.02 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMD_RS05145 255c777f191a1c449e1af05fb18f4272 64 PANTHER PTHR35534 1 60 7.2E-28 T 25-04-2016 SMD_RS05145 255c777f191a1c449e1af05fb18f4272 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.4E-19 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 PANTHER PTHR26402:SF548 2 223 2.9E-96 T 25-04-2016 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 PANTHER PTHR26402 2 223 2.9E-96 T 25-04-2016 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 SMART SM00448 2 112 4.0E-35 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 Gene3D G3DSA:1.10.10.10 126 225 5.4E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 223 3.0E-22 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 SMART SM00862 147 223 8.3E-24 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 Gene3D G3DSA:3.40.50.2300 1 125 9.8E-34 T 25-04-2016 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 SUPERFAMILY SSF46894 121 223 9.64E-28 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS02810 b8810fdfd0719bd49e6a07c0f90ff3d1 229 SUPERFAMILY SSF52172 2 124 1.57E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04650 de74dcefe36c9937ebf7da9328c2860d 120 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 108 8.6E-21 T 25-04-2016 IPR009241 Toxin HigB-like SMD_RS10175 ef7e3169a2a67265af68a559550af488 191 SUPERFAMILY SSF52738 8 189 1.7E-52 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10175 ef7e3169a2a67265af68a559550af488 191 PANTHER PTHR24421:SF16 5 187 9.4E-42 T 25-04-2016 SMD_RS10175 ef7e3169a2a67265af68a559550af488 191 Pfam PF01339 CheB methylesterase 11 185 2.7E-53 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS10175 ef7e3169a2a67265af68a559550af488 191 PANTHER PTHR24421 5 187 9.4E-42 T 25-04-2016 SMD_RS10175 ef7e3169a2a67265af68a559550af488 191 Gene3D G3DSA:3.40.50.180 7 190 1.6E-61 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS03795 f9b30569db267a60536f77c04b32dda3 132 SUPERFAMILY SSF47473 77 130 3.43E-7 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS03795 f9b30569db267a60536f77c04b32dda3 132 Gene3D G3DSA:1.10.238.10 72 128 3.6E-7 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS03795 f9b30569db267a60536f77c04b32dda3 132 Pfam PF13202 EF hand 84 100 4.0E-6 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 SUPERFAMILY SSF55174 331 400 6.02E-15 T 25-04-2016 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 9.5E-71 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 Gene3D G3DSA:3.40.50.620 10 227 1.7E-83 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 PANTHER PTHR11766:SF1 4 402 7.4E-216 T 25-04-2016 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 SUPERFAMILY SSF52374 4 315 1.19E-89 T 25-04-2016 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 Gene3D G3DSA:1.10.240.10 228 324 1.4E-27 T 25-04-2016 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 PANTHER PTHR11766 4 402 7.4E-216 T 25-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 45.684 T 25-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.7E-25 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.7E-25 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.7E-25 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.7E-25 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 Gene3D G3DSA:3.10.290.10 333 400 3.7E-20 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS01915 aa5a1e38e98f82e1bc549a1588fdd131 403 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 399 4.0E-111 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 Pfam PF02321 Outer membrane efflux protein 61 249 5.7E-25 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 Pfam PF02321 Outer membrane efflux protein 279 458 5.6E-22 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 PANTHER PTHR30203 1 459 7.2E-137 T 25-04-2016 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 Gene3D G3DSA:1.20.1600.10 48 461 2.7E-107 T 25-04-2016 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 PANTHER PTHR30203:SF13 1 459 7.2E-137 T 25-04-2016 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 SUPERFAMILY SSF56954 2 461 1.29E-99 T 25-04-2016 SMD_RS09330 e23489f36812a955faf8d9f75c6ae904 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 459 2.8E-103 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS07750 1bfff5af02ab88307f0d79c22782e026 303 PANTHER PTHR32552 4 293 2.3E-68 T 25-04-2016 SMD_RS07750 1bfff5af02ab88307f0d79c22782e026 303 Pfam PF13276 HTH-like domain 47 103 2.6E-16 T 25-04-2016 IPR025948 HTH-like domain SMD_RS07750 1bfff5af02ab88307f0d79c22782e026 303 Pfam PF00665 Integrase core domain 128 244 9.3E-29 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS07750 1bfff5af02ab88307f0d79c22782e026 303 SUPERFAMILY SSF53098 122 286 1.46E-38 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS07750 1bfff5af02ab88307f0d79c22782e026 303 Gene3D G3DSA:3.30.420.10 122 284 2.1E-37 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS15435 f214e4579e3519259cf94450354e6cc5 218 PANTHER PTHR33269:SF1 1 198 3.0E-71 T 25-04-2016 SMD_RS15435 f214e4579e3519259cf94450354e6cc5 218 PANTHER PTHR33269 1 198 3.0E-71 T 25-04-2016 SMD_RS15435 f214e4579e3519259cf94450354e6cc5 218 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 167 1.8E-36 T 25-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 392 1.1E-132 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 197 211 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 PIRSF PIRSF001434 1 396 4.4E-131 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 12 394 1.2E-176 T 25-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 Gene3D G3DSA:3.90.1150.10 254 394 1.5E-47 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 PANTHER PTHR11808 14 397 5.4E-174 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 SUPERFAMILY SSF53383 18 394 2.58E-113 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 Gene3D G3DSA:3.40.640.10 13 253 3.3E-86 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS16595 9d081a3accbd36190b0c85bada3f19ea 411 PANTHER PTHR11808:SF15 14 397 5.4E-174 T 25-04-2016 SMD_RS13000 e68d60f3cb0592e968f7d43013220630 218 PANTHER PTHR30055:SF39 10 211 6.6E-72 T 25-04-2016 SMD_RS13000 e68d60f3cb0592e968f7d43013220630 218 SUPERFAMILY SSF46689 22 82 7.83E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS13000 e68d60f3cb0592e968f7d43013220630 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 73 1.5E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS13000 e68d60f3cb0592e968f7d43013220630 218 PANTHER PTHR30055 10 211 6.6E-72 T 25-04-2016 SMD_RS13000 e68d60f3cb0592e968f7d43013220630 218 Gene3D G3DSA:1.10.357.10 16 207 3.4E-24 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS15295 15ce2dff89ad2737b6c6a9b2c4c5dbd1 113 PIRSF PIRSF029416 1 109 4.2E-41 T 25-04-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 SMD_RS15295 15ce2dff89ad2737b6c6a9b2c4c5dbd1 113 SUPERFAMILY SSF52788 1 109 3.4E-21 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS15295 15ce2dff89ad2737b6c6a9b2c4c5dbd1 113 Gene3D G3DSA:3.40.50.270 1 37 1.3E-7 T 25-04-2016 SMD_RS15295 15ce2dff89ad2737b6c6a9b2c4c5dbd1 113 SMART SM00226 2 96 0.0018 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS15295 15ce2dff89ad2737b6c6a9b2c4c5dbd1 113 Gene3D G3DSA:3.40.50.270 38 87 1.2E-4 T 25-04-2016 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 SUPERFAMILY SSF46785 1 148 9.69E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 3.895081E-9 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 3.895081E-9 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 3.895081E-9 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 3.895081E-9 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 PANTHER PTHR33164:SF16 24 150 2.2E-31 T 25-04-2016 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 Gene3D G3DSA:1.10.10.10 4 146 1.4E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 SMART SM00347 32 133 4.1E-14 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 PANTHER PTHR33164 24 150 2.2E-31 T 25-04-2016 SMD_RS21800 bbbb5eaf92af418f0175f0cd0c437f03 151 Pfam PF12802 MarR family 39 97 2.7E-8 T 25-04-2016 SMD_RS06180 c460ee9fef3d5c5979074fda59b79c86 404 Gene3D G3DSA:3.60.10.10 241 302 2.1E-5 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS06180 c460ee9fef3d5c5979074fda59b79c86 404 Gene3D G3DSA:3.60.10.10 146 181 2.1E-5 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS06180 c460ee9fef3d5c5979074fda59b79c86 404 Gene3D G3DSA:3.60.10.10 28 99 2.1E-5 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS06180 c460ee9fef3d5c5979074fda59b79c86 404 SUPERFAMILY SSF56219 142 403 4.75E-22 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS06180 c460ee9fef3d5c5979074fda59b79c86 404 SUPERFAMILY SSF56219 38 109 4.75E-22 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS06180 c460ee9fef3d5c5979074fda59b79c86 404 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 41 396 6.0E-36 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS06880 6b711635c53fb9b15230203c1c3b9bb9 118 PANTHER PTHR28620:SF2 1 116 3.1E-28 T 25-04-2016 SMD_RS06880 6b711635c53fb9b15230203c1c3b9bb9 118 PANTHER PTHR28620 1 116 3.1E-28 T 25-04-2016 SMD_RS06880 6b711635c53fb9b15230203c1c3b9bb9 118 SUPERFAMILY SSF51316 1 111 4.81E-25 T 25-04-2016 IPR011057 Mss4-like SMD_RS06880 6b711635c53fb9b15230203c1c3b9bb9 118 Gene3D G3DSA:3.90.1590.10 1 104 3.5E-19 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS06880 6b711635c53fb9b15230203c1c3b9bb9 118 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 97 2.9E-7 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMD_RS16970 7b64f9e3294b567504e7fbf579907aa9 286 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 9 286 6.1E-97 T 25-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 SMD_RS20730 137b79e2b0b0598748b64759add90336 463 PANTHER PTHR41983 2 451 4.2E-256 T 25-04-2016 SMD_RS20730 137b79e2b0b0598748b64759add90336 463 Pfam PF02667 Short chain fatty acid transporter 6 448 2.2E-88 T 25-04-2016 IPR006160 Short chain fatty acid transporter AtoE SMD_RS20730 137b79e2b0b0598748b64759add90336 463 PANTHER PTHR41983:SF1 2 451 4.2E-256 T 25-04-2016 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.6E-132 T 25-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 3.3E-65 T 25-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 SUPERFAMILY SSF51735 3 168 2.9E-65 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 Gene3D G3DSA:3.40.50.720 3 160 5.0E-78 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PIRSF PIRSF000149 1 334 1.5E-129 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 6.1E-47 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 6.1E-47 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 6.1E-47 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 6.1E-47 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 6.1E-47 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PANTHER PTHR10836 1 334 3.6E-225 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 SUPERFAMILY SSF55347 151 314 1.82E-74 T 25-04-2016 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 SMART SM00846 3 152 7.8E-96 T 25-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 PANTHER PTHR10836:SF31 1 334 3.6E-225 T 25-04-2016 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 1.5E-59 T 25-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 Gene3D G3DSA:3.30.360.10 161 316 1.9E-81 T 25-04-2016 SMD_RS17680 3db7b849d3bd739acb67f28fa1205cfc 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 25-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SMD_RS15460 2b66d8ce7c8e87e99969f3c7253a4c07 175 SUPERFAMILY SSF52833 20 174 4.03E-47 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15460 2b66d8ce7c8e87e99969f3c7253a4c07 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 1.3E-47 T 25-04-2016 SMD_RS15460 2b66d8ce7c8e87e99969f3c7253a4c07 175 PIRSF PIRSF000216 3 175 2.7E-54 T 25-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SMD_RS15460 2b66d8ce7c8e87e99969f3c7253a4c07 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 1.7E-60 T 25-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SMD_RS15460 2b66d8ce7c8e87e99969f3c7253a4c07 175 Gene3D G3DSA:3.40.30.10 94 172 9.6E-8 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15460 2b66d8ce7c8e87e99969f3c7253a4c07 175 PANTHER PTHR10371 19 175 4.0E-70 T 25-04-2016 SMD_RS00580 8d84c5b1edf66c550a7c52f9a34aae10 204 Gene3D G3DSA:3.40.50.150 12 186 6.0E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS00580 8d84c5b1edf66c550a7c52f9a34aae10 204 Pfam PF06080 Protein of unknown function (DUF938) 4 202 1.0E-72 T 25-04-2016 IPR010342 Protein of unknown function DUF938 SMD_RS00580 8d84c5b1edf66c550a7c52f9a34aae10 204 PANTHER PTHR20974:SF0 1 204 1.5E-77 T 25-04-2016 SMD_RS00580 8d84c5b1edf66c550a7c52f9a34aae10 204 SUPERFAMILY SSF53335 12 202 3.1E-22 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS00580 8d84c5b1edf66c550a7c52f9a34aae10 204 PANTHER PTHR20974 1 204 1.5E-77 T 25-04-2016 IPR010342 Protein of unknown function DUF938 SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PANTHER PTHR24322 153 185 1.3E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PANTHER PTHR24322 8 137 1.3E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 Gene3D G3DSA:3.40.50.720 4 245 4.9E-71 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 1.5E-52 T 25-04-2016 SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.5E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.5E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.5E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.5E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.5E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.5E-37 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 8.0E-4 T 25-04-2016 SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 SUPERFAMILY SSF51735 4 245 2.94E-68 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.3E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.3E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.3E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PANTHER PTHR24322:SF328 153 185 1.3E-41 T 25-04-2016 SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 PANTHER PTHR24322:SF328 8 137 1.3E-41 T 25-04-2016 SMD_RS18410 d88b085051bf5db48373f2b937d4e3dd 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 6.0E-98 T 25-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 SMD_RS18230 4a8e7b7d7c8bf8d7a0db277e4b4d4351 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 2 484 4.0E-184 T 25-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SMD_RS18230 4a8e7b7d7c8bf8d7a0db277e4b4d4351 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 40 485 5.0E-152 T 25-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SMD_RS18230 4a8e7b7d7c8bf8d7a0db277e4b4d4351 525 ProSitePatterns PS01303 BCCT family of transporters signature. 303 312 - T 25-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 SMD_RS18230 4a8e7b7d7c8bf8d7a0db277e4b4d4351 525 PANTHER PTHR30047:SF2 1 521 6.7E-202 T 25-04-2016 SMD_RS18230 4a8e7b7d7c8bf8d7a0db277e4b4d4351 525 PANTHER PTHR30047 1 521 6.7E-202 T 25-04-2016 SMD_RS02140 00ca67ae56e1fa584fab628aa6e4f649 388 Gene3D G3DSA:2.120.10.30 35 387 1.3E-105 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS02140 00ca67ae56e1fa584fab628aa6e4f649 388 SUPERFAMILY SSF50952 48 373 2.09E-42 T 25-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SMD_RS02140 00ca67ae56e1fa584fab628aa6e4f649 388 Pfam PF07995 Glucose / Sorbosone dehydrogenase 54 383 2.4E-131 T 25-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 SMD_RS02140 00ca67ae56e1fa584fab628aa6e4f649 388 PANTHER PTHR19328 46 377 1.2E-74 T 25-04-2016 SMD_RS07075 7172afcc74d1ed9d73617c21d587bb25 121 PANTHER PTHR30041 1 116 1.5E-34 T 25-04-2016 SMD_RS07075 7172afcc74d1ed9d73617c21d587bb25 121 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 111 1.1E-28 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SMD_RS07075 7172afcc74d1ed9d73617c21d587bb25 121 Pfam PF03960 ArsC family 7 114 7.4E-13 T 25-04-2016 IPR006660 Arsenate reductase-like SMD_RS07075 7172afcc74d1ed9d73617c21d587bb25 121 SUPERFAMILY SSF52833 3 115 5.18E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07075 7172afcc74d1ed9d73617c21d587bb25 121 Gene3D G3DSA:3.40.30.10 3 115 2.9E-35 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07075 7172afcc74d1ed9d73617c21d587bb25 121 PANTHER PTHR30041:SF3 1 116 1.5E-34 T 25-04-2016 SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 SUPERFAMILY SSF51430 1 321 4.85E-93 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 263 275 7.5E-9 T 25-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 7.5E-9 T 25-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 276 289 7.5E-9 T 25-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 7.5E-9 T 25-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 237 249 7.5E-9 T 25-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PANTHER PTHR11732 1 229 2.3E-127 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 PANTHER PTHR11732 246 306 2.3E-127 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 Pfam PF00248 Aldo/keto reductase family 16 306 1.3E-68 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS03635 62f2ae70f0dd90570c57815e5cf2d1a6 323 Gene3D G3DSA:3.20.20.100 1 321 2.7E-97 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS01555 7eb0a4476525f5791ec02993676d49a3 347 PANTHER PTHR35243 1 347 3.7E-134 T 25-04-2016 SMD_RS01555 7eb0a4476525f5791ec02993676d49a3 347 PANTHER PTHR35243:SF15 1 347 3.7E-134 T 25-04-2016 SMD_RS15760 33cf71cfdce02b049448ba7a12e3fbcc 223 Gene3D G3DSA:1.20.1540.10 5 200 1.8E-43 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS15760 33cf71cfdce02b049448ba7a12e3fbcc 223 SUPERFAMILY SSF144091 4 207 1.11E-44 T 25-04-2016 SMD_RS15760 33cf71cfdce02b049448ba7a12e3fbcc 223 Pfam PF01694 Rhomboid family 53 202 2.6E-38 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS15760 33cf71cfdce02b049448ba7a12e3fbcc 223 PANTHER PTHR22936 8 200 1.1E-35 T 25-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 Gene3D G3DSA:1.20.1600.10 19 428 4.2E-89 T 25-04-2016 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 441 6.1E-122 T 25-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 PIRSF PIRSF001892 3 435 7.4E-60 T 25-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 PANTHER PTHR30026:SF3 6 448 1.1E-114 T 25-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 PANTHER PTHR30026 6 448 1.1E-114 T 25-04-2016 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 Pfam PF02321 Outer membrane efflux protein 24 212 9.4E-23 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 Pfam PF02321 Outer membrane efflux protein 237 426 2.2E-35 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS18315 608a0db76f4ad4413b36d2820bff3300 452 SUPERFAMILY SSF56954 1 428 3.79E-92 T 25-04-2016 SMD_RS19195 b4911ba617988be23478189767b71c12 171 Pfam PF03167 Uracil DNA glycosylase superfamily 13 163 1.8E-11 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS19195 b4911ba617988be23478189767b71c12 171 Gene3D G3DSA:3.40.470.10 10 169 7.8E-33 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS19195 b4911ba617988be23478189767b71c12 171 SUPERFAMILY SSF52141 10 167 5.04E-34 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS19195 b4911ba617988be23478189767b71c12 171 SMART SM00987 11 167 4.6E-7 T 25-04-2016 SMD_RS19195 b4911ba617988be23478189767b71c12 171 SMART SM00986 11 167 4.6E-7 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMD_RS19195 b4911ba617988be23478189767b71c12 171 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 10 162 5.6E-38 T 25-04-2016 IPR026353 Hypoxanthine-DNA glycosylase SMD_RS00955 4bc9a13785bba676a1df0ceb9f101268 596 Gene3D G3DSA:3.40.50.300 1 360 6.1E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00955 4bc9a13785bba676a1df0ceb9f101268 596 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 203 355 7.5E-15 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMD_RS00955 4bc9a13785bba676a1df0ceb9f101268 596 Pfam PF13175 AAA ATPase domain 1 45 7.2E-13 T 25-04-2016 SMD_RS00955 4bc9a13785bba676a1df0ceb9f101268 596 SUPERFAMILY SSF52540 182 227 1.35E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00955 4bc9a13785bba676a1df0ceb9f101268 596 SUPERFAMILY SSF52540 276 360 1.35E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS00955 4bc9a13785bba676a1df0ceb9f101268 596 SUPERFAMILY SSF52540 1 144 1.35E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS12750 cffe7320fcfec70e68baec0d0b3518cd 166 PANTHER PTHR23404:SF2 17 143 3.9E-29 T 25-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12750 cffe7320fcfec70e68baec0d0b3518cd 166 Gene3D G3DSA:3.90.1170.40 7 143 3.1E-38 T 25-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12750 cffe7320fcfec70e68baec0d0b3518cd 166 PANTHER PTHR23404 17 143 3.9E-29 T 25-04-2016 SMD_RS12750 cffe7320fcfec70e68baec0d0b3518cd 166 Pfam PF02391 MoaE protein 15 125 3.4E-28 T 25-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS12750 cffe7320fcfec70e68baec0d0b3518cd 166 SUPERFAMILY SSF54690 15 149 4.97E-36 T 25-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 SMART SM00388 244 309 2.9E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PANTHER PTHR24423:SF556 77 132 1.7E-72 T 25-04-2016 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PANTHER PTHR24423:SF556 186 462 1.7E-72 T 25-04-2016 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 460 1.8E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 302 6.1E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 Gene3D G3DSA:1.10.287.130 235 302 2.4E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 1.1E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.1E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.1E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.1E-13 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 SUPERFAMILY SSF55874 299 460 4.85E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 Pfam PF08521 Two-component sensor kinase N-terminal 26 168 1.0E-39 T 25-04-2016 IPR013727 Two-component sensor kinase, N-terminal SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 SMART SM00387 354 462 1.4E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 Gene3D G3DSA:3.30.565.10 316 461 3.5E-37 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PANTHER PTHR24423 77 132 1.7E-72 T 25-04-2016 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 PANTHER PTHR24423 186 462 1.7E-72 T 25-04-2016 SMD_RS18390 26c21d9f570457594707fae1427ce1fb 463 SUPERFAMILY SSF47384 227 302 6.47E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 8.3E-22 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 8.3E-22 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 8.3E-22 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 8.3E-22 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 PANTHER PTHR11236:SF9 6 489 2.3E-229 T 25-04-2016 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 Pfam PF00425 chorismate binding enzyme 223 476 6.3E-99 T 25-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 6.2E-26 T 25-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 5.2E-166 T 25-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 SUPERFAMILY SSF56322 16 484 2.62E-155 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 PANTHER PTHR11236 6 489 2.3E-229 T 25-04-2016 SMD_RS20280 3d77c28ea554d4b69bff2e1810d7bd2e 491 Gene3D G3DSA:3.60.120.10 14 487 6.0E-171 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 PANTHER PTHR33909:SF1 3 114 6.9E-34 T 25-04-2016 SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 25 105 4.4E-29 T 25-04-2016 IPR003849 Preprotein translocase YajC SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 PANTHER PTHR33909 3 114 6.9E-34 T 25-04-2016 SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 Pfam PF02699 Preprotein translocase subunit 27 102 2.0E-30 T 25-04-2016 IPR003849 Preprotein translocase YajC SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 SMART SM01323 23 105 1.2E-45 T 25-04-2016 IPR003849 Preprotein translocase YajC SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 PRINTS PR01853 Bacterial YajC preprotein translocase signature 63 81 2.9E-14 T 25-04-2016 IPR003849 Preprotein translocase YajC SMD_RS09565 4752298bc0e86f210fb0a2ec0d163286 114 PRINTS PR01853 Bacterial YajC preprotein translocase signature 25 45 2.9E-14 T 25-04-2016 IPR003849 Preprotein translocase YajC SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 PANTHER PTHR30270 1 319 1.1E-111 T 25-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 PANTHER PTHR30270:SF0 1 319 1.1E-111 T 25-04-2016 SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 PIRSF PIRSF005303 1 319 2.4E-88 T 25-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 Gene3D G3DSA:3.30.1330.10 3 139 1.8E-46 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 8.7E-24 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 316 30.208 T 25-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 Gene3D G3DSA:3.90.650.10 144 319 1.8E-44 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 SUPERFAMILY SSF55326 4 137 1.17E-34 T 25-04-2016 SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 Pfam PF02769 AIR synthase related protein, C-terminal domain 204 306 1.2E-6 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 5 319 2.6E-106 T 25-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SMD_RS03345 794f51efcc32aaf4851b33ea156f3343 320 SUPERFAMILY SSF56042 142 309 3.59E-35 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMD_RS03405 4d8008a9898912bc4ab1693e9708bf62 304 PANTHER PTHR33055 1 292 4.2E-45 T 25-04-2016 SMD_RS03405 4d8008a9898912bc4ab1693e9708bf62 304 PANTHER PTHR33055:SF3 1 292 4.2E-45 T 25-04-2016 SMD_RS03405 4d8008a9898912bc4ab1693e9708bf62 304 Pfam PF02371 Transposase IS116/IS110/IS902 family 186 266 2.9E-19 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SMD_RS03405 4d8008a9898912bc4ab1693e9708bf62 304 Pfam PF01548 Transposase 4 147 2.0E-20 T 25-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SMD_RS02405 4d8008a9898912bc4ab1693e9708bf62 304 PANTHER PTHR33055 1 292 4.2E-45 T 25-04-2016 SMD_RS02405 4d8008a9898912bc4ab1693e9708bf62 304 PANTHER PTHR33055:SF3 1 292 4.2E-45 T 25-04-2016 SMD_RS02405 4d8008a9898912bc4ab1693e9708bf62 304 Pfam PF02371 Transposase IS116/IS110/IS902 family 186 266 2.9E-19 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SMD_RS02405 4d8008a9898912bc4ab1693e9708bf62 304 Pfam PF01548 Transposase 4 147 2.0E-20 T 25-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SMD_RS02440 4d8008a9898912bc4ab1693e9708bf62 304 PANTHER PTHR33055 1 292 4.2E-45 T 25-04-2016 SMD_RS02440 4d8008a9898912bc4ab1693e9708bf62 304 PANTHER PTHR33055:SF3 1 292 4.2E-45 T 25-04-2016 SMD_RS02440 4d8008a9898912bc4ab1693e9708bf62 304 Pfam PF02371 Transposase IS116/IS110/IS902 family 186 266 2.9E-19 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SMD_RS02440 4d8008a9898912bc4ab1693e9708bf62 304 Pfam PF01548 Transposase 4 147 2.0E-20 T 25-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SMD_RS16320 0b54f234f778532cf9e55e1066434e5d 255 SUPERFAMILY SSF48317 24 242 2.03E-14 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS16320 0b54f234f778532cf9e55e1066434e5d 255 Pfam PF01569 PAP2 superfamily 108 236 2.5E-10 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS16320 0b54f234f778532cf9e55e1066434e5d 255 Gene3D G3DSA:1.20.144.10 68 231 6.2E-7 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS08580 9b1c36adbc54eeedaac5819c5cd9494a 312 Pfam PF06114 Domain of unknown function (DUF955) 69 189 3.2E-17 T 25-04-2016 IPR010359 HTH domain, IrrE-type SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 SUPERFAMILY SSF53335 224 317 2.52E-41 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 SUPERFAMILY SSF53335 19 124 2.52E-41 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 PANTHER PTHR11265 17 320 6.3E-137 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 17 317 2.0E-102 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 PANTHER PTHR11265:SF0 17 320 6.3E-137 T 25-04-2016 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 Pfam PF01795 MraW methylase family 18 318 8.3E-103 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 19 318 38.144 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 Gene3D G3DSA:3.40.50.150 19 121 1.2E-48 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 Gene3D G3DSA:3.40.50.150 227 317 1.2E-48 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 Gene3D G3DSA:1.10.150.170 123 226 1.0E-38 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 SUPERFAMILY SSF81799 125 224 4.84E-36 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS03425 f5cad90c4fe2c2affbc55ce7b4e39526 322 PIRSF PIRSF004486 13 319 6.6E-100 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMD_RS14820 9fff00774dd3985e2094b4efe70b8ef6 153 PANTHER PTHR34128:SF1 1 144 8.5E-52 T 25-04-2016 SMD_RS14820 9fff00774dd3985e2094b4efe70b8ef6 153 PANTHER PTHR34128 1 144 8.5E-52 T 25-04-2016 SMD_RS14820 9fff00774dd3985e2094b4efe70b8ef6 153 Gene3D G3DSA:2.40.50.140 27 124 5.0E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14820 9fff00774dd3985e2094b4efe70b8ef6 153 SUPERFAMILY SSF82093 30 136 2.22E-32 T 25-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SMD_RS14820 9fff00774dd3985e2094b4efe70b8ef6 153 Pfam PF03100 CcmE 5 130 6.5E-38 T 25-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SMD_RS14820 9fff00774dd3985e2094b4efe70b8ef6 153 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 28.958 T 25-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 74 491 3.4E-20 T 25-04-2016 IPR005674 CocE/Serine esterase GO:0016787 SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 SUPERFAMILY SSF49785 389 522 5.1E-9 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 SMART SM00939 291 519 1.4E-12 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 PANTHER PTHR11731 29 171 1.2E-21 T 25-04-2016 SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 Gene3D G3DSA:3.40.50.1820 4 166 1.8E-48 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 Gene3D G3DSA:3.40.50.1820 219 322 1.8E-48 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 Gene3D G3DSA:2.60.120.260 394 521 2.6E-9 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 415 501 4.1E-6 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 SUPERFAMILY SSF53474 23 326 2.54E-48 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS11915 c670764b6b15e52bdd8b75b1dbae5b97 524 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 34 272 6.7E-28 T 25-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 PANTHER PTHR11993:SF10 207 430 1.6E-236 T 25-04-2016 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 PANTHER PTHR11993:SF10 13 182 1.6E-236 T 25-04-2016 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 435 48.385 T 25-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 Gene3D G3DSA:1.10.645.10 276 424 2.3E-18 T 25-04-2016 IPR029014 NiFe hydrogenase-like SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 Gene3D G3DSA:1.10.645.10 20 274 6.6E-47 T 25-04-2016 IPR029014 NiFe hydrogenase-like SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 PANTHER PTHR11993 207 430 1.6E-236 T 25-04-2016 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 PANTHER PTHR11993 13 182 1.6E-236 T 25-04-2016 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 2.2E-179 T 25-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 4.0E-120 T 25-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 SUPERFAMILY SSF56762 34 435 1.57E-132 T 25-04-2016 IPR029014 NiFe hydrogenase-like SMD_RS15465 1baec4df3c3a96d331c44be6d5e6267b 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 25-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 SMD_RS00345 4f2e0c09a471c16f4e7d3f28ec74b7a8 242 SUPERFAMILY SSF81901 53 113 6.02E-8 T 25-04-2016 SMD_RS00345 4f2e0c09a471c16f4e7d3f28ec74b7a8 242 Gene3D G3DSA:1.25.40.10 61 117 3.8E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 689 768 1.8E-13 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 SUPERFAMILY SSF53738 471 571 6.67E-32 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Gene3D G3DSA:3.40.120.10 488 565 4.3E-32 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 472 569 8.8E-29 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Gene3D G3DSA:3.40.120.10 325 458 7.7E-35 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 SUPERFAMILY SSF55957 683 779 2.88E-20 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 SUPERFAMILY SSF53738 575 681 4.32E-31 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 SUPERFAMILY SSF53738 325 459 3.57E-38 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 325 451 7.2E-35 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 413 427 3.9E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 486 505 3.9E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 520 533 3.9E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 549 564 3.9E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Gene3D G3DSA:3.40.120.10 568 683 1.0E-42 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 PANTHER PTHR22573 303 781 2.7E-209 T 25-04-2016 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Gene3D G3DSA:3.30.310.50 686 773 4.9E-25 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 PANTHER PTHR22573:SF28 303 781 2.7E-209 T 25-04-2016 SMD_RS01840 a4f4faa1471f553416ea0715958556bf 782 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 575 683 1.8E-21 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 Pfam PF04542 Sigma-70 region 2 19 79 1.8E-9 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 PANTHER PTHR30173:SF30 10 175 9.1E-28 T 25-04-2016 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 Pfam PF08281 Sigma-70, region 4 117 159 4.3E-9 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 Gene3D G3DSA:1.10.10.10 112 167 1.8E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 Gene3D G3DSA:1.10.1740.10 12 99 1.8E-11 T 25-04-2016 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 SUPERFAMILY SSF88659 95 168 1.2E-10 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 PANTHER PTHR30173 10 175 9.1E-28 T 25-04-2016 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 SUPERFAMILY SSF88946 19 98 1.18E-12 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS12655 c1db23106503c011951be2a6f6422c86 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 165 3.8E-20 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS11070 6571c657420b895b110be239cc58a20f 246 PANTHER PTHR30098 7 231 1.1E-75 T 25-04-2016 SMD_RS11070 6571c657420b895b110be239cc58a20f 246 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 246 95.315 T 25-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMD_RS11070 6571c657420b895b110be239cc58a20f 246 SUPERFAMILY SSF55729 10 232 1.06E-87 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS11070 6571c657420b895b110be239cc58a20f 246 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 222 1.6E-59 T 25-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMD_RS11070 6571c657420b895b110be239cc58a20f 246 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 209 1.6E-69 T 25-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 PANTHER PTHR10072 2 130 5.9E-50 T 25-04-2016 SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 26 129 6.8E-39 T 25-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 SUPERFAMILY SSF89360 25 119 1.96E-31 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 130 35.866 T 25-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 Pfam PF01521 Iron-sulphur cluster biosynthesis 25 125 1.3E-20 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 111 128 - T 25-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SMD_RS20165 e683a079d8aa7f4f2fa6b74299a1cea4 130 Gene3D G3DSA:2.60.300.12 23 116 1.7E-32 T 25-04-2016 IPR000361 FeS cluster biogenesis SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 Pfam PF00067 Cytochrome P450 228 394 1.2E-36 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PANTHER PTHR24286:SF77 214 397 5.0E-28 T 25-04-2016 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00385 P450 superfamily signature 346 355 4.3E-5 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00385 P450 superfamily signature 272 283 4.3E-5 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00385 P450 superfamily signature 355 366 4.3E-5 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00385 P450 superfamily signature 239 252 4.3E-5 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 SUPERFAMILY SSF48264 16 389 1.18E-45 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00465 E-class P450 group IV signature 339 355 2.0E-12 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00465 E-class P450 group IV signature 355 373 2.0E-12 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00465 E-class P450 group IV signature 267 283 2.0E-12 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PRINTS PR00465 E-class P450 group IV signature 316 334 2.0E-12 T 25-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 PANTHER PTHR24286 214 397 5.0E-28 T 25-04-2016 SMD_RS09350 2dbbbc8848bd87b1fcb5cfa6754a098b 408 Gene3D G3DSA:1.10.630.10 17 396 1.3E-44 T 25-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 Pfam PF02254 TrkA-N domain 407 520 4.8E-18 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 SUPERFAMILY SSF51735 406 534 5.05E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 PANTHER PTHR16254:SF22 1 561 0.0 T 25-04-2016 SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 290 3.2E-78 T 25-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 PANTHER PTHR16254 1 561 0.0 T 25-04-2016 SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 Gene3D G3DSA:3.40.50.720 403 535 3.2E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09800 dc84397b93184e32b8b3a4cec830c315 610 Pfam PF00999 Sodium/hydrogen exchanger family 16 379 2.7E-66 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMD_RS12980 21ce7fafa3b772625a8b123bc23d0db8 192 PANTHER PTHR30466 23 179 1.2E-34 T 25-04-2016 SMD_RS12980 21ce7fafa3b772625a8b123bc23d0db8 192 Pfam PF01613 Flavin reductase like domain 37 180 1.8E-33 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SMD_RS12980 21ce7fafa3b772625a8b123bc23d0db8 192 Gene3D G3DSA:2.30.110.10 27 180 1.1E-47 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS12980 21ce7fafa3b772625a8b123bc23d0db8 192 SMART SM00903 36 181 8.3E-46 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SMD_RS12980 21ce7fafa3b772625a8b123bc23d0db8 192 SUPERFAMILY SSF50475 27 179 3.58E-39 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMD_RS12980 21ce7fafa3b772625a8b123bc23d0db8 192 PANTHER PTHR30466:SF1 23 179 1.2E-34 T 25-04-2016 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 Gene3D G3DSA:3.40.630.10 407 468 2.5E-47 T 25-04-2016 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 Gene3D G3DSA:3.40.630.10 12 219 2.5E-47 T 25-04-2016 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 PANTHER PTHR11014 1 474 9.5E-214 T 25-04-2016 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 Pfam PF01546 Peptidase family M20/M25/M40 95 466 7.1E-22 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 Gene3D G3DSA:3.30.70.360 220 375 1.5E-29 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 Pfam PF07687 Peptidase dimerisation domain 207 367 9.5E-13 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 SUPERFAMILY SSF53187 383 468 1.09E-49 T 25-04-2016 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 SUPERFAMILY SSF53187 12 209 1.09E-49 T 25-04-2016 SMD_RS05555 7ec6b9521565035ff12800d1ae9ebf62 497 PANTHER PTHR11014:SF88 1 474 9.5E-214 T 25-04-2016 SMD_RS05220 4b25bbee52bc1454a05101b0c3f3f023 126 Gene3D G3DSA:3.30.429.10 4 125 5.0E-42 T 25-04-2016 SMD_RS05220 4b25bbee52bc1454a05101b0c3f3f023 126 Pfam PF14552 Tautomerase enzyme 37 118 1.7E-33 T 25-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SMD_RS05220 4b25bbee52bc1454a05101b0c3f3f023 126 PANTHER PTHR38460 2 125 3.8E-36 T 25-04-2016 SMD_RS05220 4b25bbee52bc1454a05101b0c3f3f023 126 SUPERFAMILY SSF55331 2 125 7.23E-40 T 25-04-2016 IPR014347 Tautomerase/MIF superfamily SMD_RS05220 4b25bbee52bc1454a05101b0c3f3f023 126 PANTHER PTHR38460:SF1 2 125 3.8E-36 T 25-04-2016 SMD_RS03640 7c8883c0eb59efce263f1f77d7a2ce42 64 Gene3D G3DSA:2.10.70.10 24 64 5.5E-20 T 25-04-2016 SMD_RS03640 7c8883c0eb59efce263f1f77d7a2ce42 64 Pfam PF10636 Hemin uptake protein hemP 28 64 1.3E-18 T 25-04-2016 IPR019600 Hemin uptake protein HemP SMD_RS11780 afbc4c168bc81fbcd91e6f08164a36c1 340 PANTHER PTHR12461 4 317 3.8E-106 T 25-04-2016 SMD_RS11780 afbc4c168bc81fbcd91e6f08164a36c1 340 SMART SM00558 120 278 2.4E-4 T 25-04-2016 IPR003347 JmjC domain SMD_RS11780 afbc4c168bc81fbcd91e6f08164a36c1 340 Gene3D G3DSA:2.60.120.650 24 262 8.7E-37 T 25-04-2016 SMD_RS11780 afbc4c168bc81fbcd91e6f08164a36c1 340 Pfam PF13621 Cupin-like domain 21 263 2.3E-50 T 25-04-2016 SMD_RS11780 afbc4c168bc81fbcd91e6f08164a36c1 340 PANTHER PTHR12461:SF39 4 317 3.8E-106 T 25-04-2016 SMD_RS11780 afbc4c168bc81fbcd91e6f08164a36c1 340 SUPERFAMILY SSF51197 24 328 1.25E-51 T 25-04-2016 SMD_RS17075 6cc7243176fada3f447ccd9899d7f7d8 132 Pfam PF06995 Phage P2 GpU 6 124 6.8E-42 T 25-04-2016 IPR009734 Myoviridae, GpU SMD_RS17075 6cc7243176fada3f447ccd9899d7f7d8 132 PIRSF PIRSF029208 1 132 3.7E-44 T 25-04-2016 IPR016912 Bacteriophage P2, GpU SMD_RS14220 52c3b837d33ade84f64467309d2c55e0 374 PANTHER PTHR11751 28 369 8.5E-52 T 25-04-2016 SMD_RS14220 52c3b837d33ade84f64467309d2c55e0 374 Gene3D G3DSA:3.40.640.10 57 269 2.8E-50 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS14220 52c3b837d33ade84f64467309d2c55e0 374 SUPERFAMILY SSF53383 40 368 1.28E-60 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS14220 52c3b837d33ade84f64467309d2c55e0 374 Pfam PF00155 Aminotransferase class I and II 46 361 2.7E-37 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS14220 52c3b837d33ade84f64467309d2c55e0 374 Gene3D G3DSA:3.90.1150.10 270 369 2.0E-16 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS14220 52c3b837d33ade84f64467309d2c55e0 374 PANTHER PTHR11751:SF347 28 369 8.5E-52 T 25-04-2016 SMD_RS16480 67230f2dabe1f2c20c072a00d93d0f15 85 PANTHER PTHR36582 1 85 2.5E-23 T 25-04-2016 SMD_RS16480 67230f2dabe1f2c20c072a00d93d0f15 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 70 1.7E-4 T 25-04-2016 IPR022789 Antitoxin ParD SMD_RS16480 67230f2dabe1f2c20c072a00d93d0f15 85 PANTHER PTHR36582:SF1 1 85 2.5E-23 T 25-04-2016 SMD_RS16480 67230f2dabe1f2c20c072a00d93d0f15 85 Gene3D G3DSA:1.10.1220.10 4 39 1.2E-6 T 25-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SMD_RS16480 67230f2dabe1f2c20c072a00d93d0f15 85 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 66 3.9E-16 T 25-04-2016 IPR022789 Antitoxin ParD SMD_RS16480 67230f2dabe1f2c20c072a00d93d0f15 85 SUPERFAMILY SSF47598 1 41 8.89E-11 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SMD_RS18095 a695d8ed45336f5d0557818d37514475 192 SUPERFAMILY SSF88697 7 191 7.7E-44 T 25-04-2016 IPR015947 PUA-like domain SMD_RS18095 a695d8ed45336f5d0557818d37514475 192 PANTHER PTHR23327 7 137 8.3E-33 T 25-04-2016 SMD_RS18095 a695d8ed45336f5d0557818d37514475 192 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 191 1.2E-16 T 25-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SMD_RS18095 a695d8ed45336f5d0557818d37514475 192 PANTHER PTHR23327:SF0 7 137 8.3E-33 T 25-04-2016 SMD_RS18095 a695d8ed45336f5d0557818d37514475 192 SMART SM00464 6 191 7.1E-6 T 25-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SMD_RS01255 84f7f9deecf95d7c807fa1f9159b760e 481 Gene3D G3DSA:3.60.10.10 181 478 4.5E-23 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS01255 84f7f9deecf95d7c807fa1f9159b760e 481 PANTHER PTHR11371:SF31 44 480 2.5E-125 T 25-04-2016 SMD_RS01255 84f7f9deecf95d7c807fa1f9159b760e 481 SUPERFAMILY SSF56219 178 480 2.22E-31 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS01255 84f7f9deecf95d7c807fa1f9159b760e 481 PANTHER PTHR11371 44 480 2.5E-125 T 25-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 SMD_RS01255 84f7f9deecf95d7c807fa1f9159b760e 481 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 215 456 1.0E-8 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMD_RS01860 9f6af6877413eadeec12c31e8ab3f352 216 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 27 212 32.273 T 25-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SMD_RS01860 9f6af6877413eadeec12c31e8ab3f352 216 PANTHER PTHR30042:SF2 24 210 1.2E-71 T 25-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SMD_RS01860 9f6af6877413eadeec12c31e8ab3f352 216 PANTHER PTHR30042 24 210 1.2E-71 T 25-04-2016 SMD_RS01860 9f6af6877413eadeec12c31e8ab3f352 216 Pfam PF02669 K+-transporting ATPase, c chain 31 210 3.2E-63 T 25-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SMD_RS01860 9f6af6877413eadeec12c31e8ab3f352 216 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 31 211 1.6E-57 T 25-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SMD_RS01860 9f6af6877413eadeec12c31e8ab3f352 216 PIRSF PIRSF001296 27 215 3.7E-65 T 25-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SMD_RS05550 7ef115ffaaf6fa055e3530b29f2b8d54 89 Pfam PF04226 Transglycosylase associated protein 40 86 6.7E-12 T 25-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SMD_RS05550 7ef115ffaaf6fa055e3530b29f2b8d54 89 PANTHER PTHR33884:SF1 2 89 1.8E-35 T 25-04-2016 SMD_RS05550 7ef115ffaaf6fa055e3530b29f2b8d54 89 PANTHER PTHR33884 2 89 1.8E-35 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Gene3D G3DSA:2.20.200.10 109 132 5.2E-18 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Gene3D G3DSA:2.20.200.10 306 341 5.2E-18 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Gene3D G3DSA:1.20.1600.10 343 457 2.6E-96 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Gene3D G3DSA:1.20.1600.10 53 89 2.6E-96 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Gene3D G3DSA:1.20.1600.10 133 305 2.6E-96 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 456 9.5E-111 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 PANTHER PTHR30203 1 459 1.8E-149 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 SUPERFAMILY SSF56954 4 458 1.44E-104 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 PANTHER PTHR30203:SF15 1 459 1.8E-149 T 25-04-2016 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Pfam PF02321 Outer membrane efflux protein 63 245 2.6E-25 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS18930 86db0b0f1266284389a8957a5a04b3bb 461 Pfam PF02321 Outer membrane efflux protein 275 454 4.9E-29 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS11870 0eddea7705fab505a3adc5bdb4377827 194 SUPERFAMILY SSF52218 1 180 3.71E-33 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS11870 0eddea7705fab505a3adc5bdb4377827 194 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 177 7.8E-78 T 25-04-2016 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 SMD_RS11870 0eddea7705fab505a3adc5bdb4377827 194 Gene3D G3DSA:3.40.50.360 2 176 1.9E-32 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS11870 0eddea7705fab505a3adc5bdb4377827 194 PANTHER PTHR30543:SF8 1 191 6.6E-93 T 25-04-2016 SMD_RS11870 0eddea7705fab505a3adc5bdb4377827 194 Pfam PF03358 NADPH-dependent FMN reductase 6 149 2.3E-29 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMD_RS11870 0eddea7705fab505a3adc5bdb4377827 194 PANTHER PTHR30543 1 191 6.6E-93 T 25-04-2016 SMD_RS15090 027da48df5222cc0cfc815ac7a3812b1 160 Gene3D G3DSA:3.40.50.300 2 148 4.4E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15090 027da48df5222cc0cfc815ac7a3812b1 160 SUPERFAMILY SSF52540 25 147 5.24E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15090 027da48df5222cc0cfc815ac7a3812b1 160 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 128 5.4E-29 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SMD_RS15090 027da48df5222cc0cfc815ac7a3812b1 160 PANTHER PTHR33540:SF2 3 148 1.0E-37 T 25-04-2016 SMD_RS15090 027da48df5222cc0cfc815ac7a3812b1 160 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 136 1.0E-29 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SMD_RS15090 027da48df5222cc0cfc815ac7a3812b1 160 PANTHER PTHR33540 3 148 1.0E-37 T 25-04-2016 SMD_RS21605 cb7fda886623a8d25065de1f03445bc2 415 Gene3D G3DSA:1.10.287.110 6 47 6.1E-5 T 25-04-2016 IPR001623 DnaJ domain SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 PIRSF PIRSF000370 22 233 9.8E-70 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 24 233 1.3E-109 T 25-04-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 PANTHER PTHR11228:SF6 9 227 1.1E-65 T 25-04-2016 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 PANTHER PTHR11228 9 227 1.1E-65 T 25-04-2016 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 Pfam PF04055 Radical SAM superfamily 47 124 1.1E-13 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 Gene3D G3DSA:3.20.20.70 50 123 4.3E-14 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 SUPERFAMILY SSF102114 47 170 4.05E-15 T 25-04-2016 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 24 230 36.109 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SMD_RS17175 d3bb7eebd5bd4cd442a340a19ef1f303 233 Pfam PF13394 4Fe-4S single cluster domain 45 127 5.1E-10 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 Gene3D G3DSA:2.40.170.20 412 623 1.5E-74 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 Gene3D G3DSA:2.40.170.20 343 373 1.5E-74 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 Gene3D G3DSA:2.40.170.20 745 1038 1.5E-74 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 SUPERFAMILY SSF56935 338 382 3.48E-70 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 SUPERFAMILY SSF56935 416 622 3.48E-70 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 SUPERFAMILY SSF56935 757 1038 3.48E-70 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 SUPERFAMILY SSF56935 165 292 3.48E-70 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 PANTHER PTHR30442 1 276 5.0E-21 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 PANTHER PTHR30442 308 630 5.0E-21 T 25-04-2016 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 Pfam PF00593 TonB dependent receptor 760 1035 2.2E-24 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 SMART SM00965 65 116 1.5E-11 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 Gene3D G3DSA:2.170.130.10 162 276 1.8E-22 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS12505 f242bc9e7f4052bfb8498cde10acce48 1038 Pfam PF07715 TonB-dependent Receptor Plug Domain 164 262 2.0E-8 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS17080 3f0dce87fdc744e97791d129877abd01 331 Pfam PF05954 Phage late control gene D protein (GPD) 83 316 1.4E-24 T 25-04-2016 SMD_RS17080 3f0dce87fdc744e97791d129877abd01 331 SUPERFAMILY SSF69279 9 182 3.57E-26 T 25-04-2016 SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 SUPERFAMILY SSF111369 175 266 2.35E-8 T 25-04-2016 SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 PANTHER PTHR30438:SF1 21 331 2.9E-82 T 25-04-2016 SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 SUPERFAMILY SSF111369 51 112 1.83E-6 T 25-04-2016 SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 296 4.6E-16 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 PANTHER PTHR30438 21 331 2.9E-82 T 25-04-2016 SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 Gene3D G3DSA:2.40.50.100 213 246 7.9E-14 T 25-04-2016 SMD_RS06530 69f80961cf7d769dcba0eca3078b41fd 337 Gene3D G3DSA:2.40.50.100 53 86 7.9E-14 T 25-04-2016 SMD_RS20205 52c9029ac8e70db3f4548547454df7c1 206 Pfam PF00293 NUDIX domain 7 129 1.1E-24 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS20205 52c9029ac8e70db3f4548547454df7c1 206 PANTHER PTHR23114 1 152 2.9E-50 T 25-04-2016 SMD_RS20205 52c9029ac8e70db3f4548547454df7c1 206 Gene3D G3DSA:3.90.79.10 4 149 4.9E-30 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS20205 52c9029ac8e70db3f4548547454df7c1 206 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.619 T 25-04-2016 IPR022927 RNA pyrophosphohydrolase RppH SMD_RS20205 52c9029ac8e70db3f4548547454df7c1 206 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS20205 52c9029ac8e70db3f4548547454df7c1 206 SUPERFAMILY SSF55811 6 151 4.2E-30 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS19595 18f94df2ac71f0a1762c56782f64c702 306 PIRSF PIRSF026649 1 297 9.3E-73 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMD_RS19595 18f94df2ac71f0a1762c56782f64c702 306 PANTHER PTHR30606 8 285 2.3E-52 T 25-04-2016 SMD_RS19595 18f94df2ac71f0a1762c56782f64c702 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 286 3.7E-37 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 SUPERFAMILY SSF53474 3 271 2.34E-65 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 PANTHER PTHR10992:SF859 4 274 9.6E-124 T 25-04-2016 SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 2.8E-10 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 2.8E-10 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 2.8E-10 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 Gene3D G3DSA:3.40.50.1820 4 271 5.5E-70 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 PANTHER PTHR10992 4 274 9.6E-124 T 25-04-2016 SMD_RS13200 c27ce85a93c537e37fe405799a795f43 274 Pfam PF00561 alpha/beta hydrolase fold 23 256 4.7E-25 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 PANTHER PTHR10799 305 541 4.2E-23 T 25-04-2016 SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 Gene3D G3DSA:3.30.70.270 386 542 1.6E-52 T 25-04-2016 SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 SMART SM00267 373 545 1.7E-51 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 SUPERFAMILY SSF55073 389 543 7.85E-46 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 541 4.2E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 543 1.2E-45 T 25-04-2016 IPR000160 GGDEF domain SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 PANTHER PTHR10799:SF710 305 541 4.2E-23 T 25-04-2016 SMD_RS06800 0892867f0c7d77b5e03d636ca02e9fb1 554 Pfam PF07695 7TM diverse intracellular signalling 166 368 4.2E-11 T 25-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 PANTHER PTHR11695:SF280 17 341 2.3E-135 T 25-04-2016 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 135 2.6E-33 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 Gene3D G3DSA:3.40.50.720 173 288 7.3E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 PANTHER PTHR11695 17 341 2.3E-135 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 SMART SM00829 14 338 4.2E-6 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 Gene3D G3DSA:3.90.180.10 2 172 2.3E-68 T 25-04-2016 IPR011032 GroES-like SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 Pfam PF00107 Zinc-binding dehydrogenase 179 304 3.7E-27 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 SUPERFAMILY SSF50129 2 184 7.61E-56 T 25-04-2016 IPR011032 GroES-like SMD_RS00250 017a55cbe219e81840c5a1be5f43da23 342 SUPERFAMILY SSF51735 143 308 4.15E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 PANTHER PTHR11695:SF285 13 340 2.8E-145 T 25-04-2016 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 SUPERFAMILY SSF50129 1 173 8.07E-56 T 25-04-2016 IPR011032 GroES-like SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 339 58.238 T 25-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 4.2E-29 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 SUPERFAMILY SSF51735 141 304 9.32E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 Gene3D G3DSA:3.40.50.720 173 286 3.4E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 Gene3D G3DSA:3.90.180.10 1 172 1.7E-51 T 25-04-2016 IPR011032 GroES-like SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 PANTHER PTHR11695 13 340 2.8E-145 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 339 6.4E-146 T 25-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 SMART SM00829 12 337 0.002 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 2.6E-33 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMD_RS04420 18c231d89162133b886583c3b1b05f4b 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 25-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SMD_RS13635 882349c07c7d8197db8ac2c07ce7fe51 204 PANTHER PTHR15362:SF2 3 147 3.1E-42 T 25-04-2016 SMD_RS13635 882349c07c7d8197db8ac2c07ce7fe51 204 PANTHER PTHR15362 3 147 3.1E-42 T 25-04-2016 SMD_RS13635 882349c07c7d8197db8ac2c07ce7fe51 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS13635 882349c07c7d8197db8ac2c07ce7fe51 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 13 83 1.4E-13 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS08790 34a63c0540c656c27bfee4d556126f86 179 SUPERFAMILY SSF160443 94 176 1.57E-16 T 25-04-2016 IPR002625 Smr domain SMD_RS08790 34a63c0540c656c27bfee4d556126f86 179 PANTHER PTHR35562 1 179 8.2E-68 T 25-04-2016 SMD_RS08790 34a63c0540c656c27bfee4d556126f86 179 Pfam PF01713 Smr domain 96 176 4.2E-22 T 25-04-2016 IPR002625 Smr domain SMD_RS08790 34a63c0540c656c27bfee4d556126f86 179 PANTHER PTHR35562:SF2 1 179 8.2E-68 T 25-04-2016 SMD_RS08790 34a63c0540c656c27bfee4d556126f86 179 SMART SM00463 93 177 4.7E-13 T 25-04-2016 IPR002625 Smr domain SMD_RS20070 a58ec3dccab6fdbf9c434a070225e605 138 Gene3D G3DSA:3.30.450.30 14 133 2.6E-15 T 25-04-2016 SMD_RS20070 a58ec3dccab6fdbf9c434a070225e605 138 SMART SM00960 19 107 7.5E-9 T 25-04-2016 IPR004942 Roadblock/LAMTOR2 domain SMD_RS20070 a58ec3dccab6fdbf9c434a070225e605 138 SUPERFAMILY SSF103196 13 135 4.71E-20 T 25-04-2016 SMD_RS20070 a58ec3dccab6fdbf9c434a070225e605 138 Pfam PF03259 Roadblock/LC7 domain 21 97 8.8E-13 T 25-04-2016 IPR004942 Roadblock/LAMTOR2 domain SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 SUPERFAMILY SSF53756 264 555 5.1E-7 T 25-04-2016 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 SMART SM00028 21 54 9.2 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 SMART SM00028 55 88 4.4 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 SMART SM00028 89 122 260.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 Gene3D G3DSA:1.25.40.10 8 121 1.0E-18 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 Pfam PF13428 Tetratricopeptide repeat 23 63 4.3E-5 T 25-04-2016 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 Pfam PF13844 Glycosyl transferase family 41 364 556 1.1E-43 T 25-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 Pfam PF13844 Glycosyl transferase family 41 204 355 8.6E-26 T 25-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 SUPERFAMILY SSF48452 8 151 3.25E-18 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03985 d37f9631cf0ab5b0f19c4a12207c4659 568 PANTHER PTHR23083 7 154 9.0E-15 T 25-04-2016 SMD_RS18605 003548f790090c0dcb5ae190d9661575 323 Gene3D G3DSA:3.60.15.10 32 320 6.5E-54 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS18605 003548f790090c0dcb5ae190d9661575 323 PANTHER PTHR23200 3 297 2.5E-60 T 25-04-2016 SMD_RS18605 003548f790090c0dcb5ae190d9661575 323 Pfam PF00753 Metallo-beta-lactamase superfamily 91 295 1.7E-18 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS18605 003548f790090c0dcb5ae190d9661575 323 SMART SM00849 91 297 1.4E-21 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS18605 003548f790090c0dcb5ae190d9661575 323 PANTHER PTHR23200:SF46 3 297 2.5E-60 T 25-04-2016 SMD_RS18605 003548f790090c0dcb5ae190d9661575 323 SUPERFAMILY SSF56281 32 319 5.5E-48 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS02930 e8cdb8bb6a7d764602229e9c3aaf3f62 311 SUPERFAMILY SSF53448 2 221 5.71E-36 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS02930 e8cdb8bb6a7d764602229e9c3aaf3f62 311 Gene3D G3DSA:3.90.550.10 2 172 2.6E-23 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS02930 e8cdb8bb6a7d764602229e9c3aaf3f62 311 PANTHER PTHR10859 2 310 2.5E-153 T 25-04-2016 SMD_RS02930 e8cdb8bb6a7d764602229e9c3aaf3f62 311 PANTHER PTHR10859:SF81 2 310 2.5E-153 T 25-04-2016 SMD_RS02930 e8cdb8bb6a7d764602229e9c3aaf3f62 311 Pfam PF00535 Glycosyl transferase family 2 4 165 6.0E-29 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS19860 26baf281721e561bc724f0362cbcdcf9 123 Gene3D G3DSA:3.10.180.10 4 119 7.2E-20 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19860 26baf281721e561bc724f0362cbcdcf9 123 SUPERFAMILY SSF54593 4 120 2.82E-19 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19860 26baf281721e561bc724f0362cbcdcf9 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 6.1E-5 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS19860 26baf281721e561bc724f0362cbcdcf9 123 PANTHER PTHR33993:SF4 1 120 1.4E-33 T 25-04-2016 SMD_RS19860 26baf281721e561bc724f0362cbcdcf9 123 PANTHER PTHR33993 1 120 1.4E-33 T 25-04-2016 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 PIRSF PIRSF000446 3 312 3.9E-102 T 25-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 304 1.2E-41 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 PANTHER PTHR10982 4 310 1.1E-137 T 25-04-2016 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 SUPERFAMILY SSF52151 6 124 9.16E-77 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 SUPERFAMILY SSF52151 192 312 9.16E-77 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 Gene3D G3DSA:3.30.70.250 127 198 3.4E-26 T 25-04-2016 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 Pfam PF00698 Acyl transferase domain 8 279 6.7E-37 T 25-04-2016 IPR014043 Acyl transferase SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 SUPERFAMILY SSF55048 132 199 1.7E-16 T 25-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 Gene3D G3DSA:3.40.366.10 5 124 5.7E-70 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 Gene3D G3DSA:3.40.366.10 199 302 5.7E-70 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMD_RS05160 7e5d4ff1e3c31723cbbedbd333d4104a 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 292 6.7E-101 T 25-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SMD_RS06365 97b1cfae0c9e8c049f293aab6a50f13b 212 Gene3D G3DSA:1.20.120.80 32 209 1.9E-51 T 25-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SMD_RS06365 97b1cfae0c9e8c049f293aab6a50f13b 212 Pfam PF00510 Cytochrome c oxidase subunit III 33 210 4.5E-14 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS06365 97b1cfae0c9e8c049f293aab6a50f13b 212 SUPERFAMILY SSF81452 28 210 5.36E-57 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS06365 97b1cfae0c9e8c049f293aab6a50f13b 212 PANTHER PTHR11403 21 212 1.8E-105 T 25-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SMD_RS06365 97b1cfae0c9e8c049f293aab6a50f13b 212 PANTHER PTHR11403:SF2 21 212 1.8E-105 T 25-04-2016 SMD_RS06365 97b1cfae0c9e8c049f293aab6a50f13b 212 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 33 212 6.8E-82 T 25-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 Pfam PF07514 Putative helicase 26 339 1.6E-125 T 25-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 SUPERFAMILY SSF109604 67 165 5.14E-5 T 25-04-2016 SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 SUPERFAMILY SSF46785 487 613 2.18E-43 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 Gene3D G3DSA:2.40.10.200 563 613 1.7E-7 T 25-04-2016 SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 Gene3D G3DSA:2.40.10.200 507 528 1.7E-7 T 25-04-2016 SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 25 242 2.8E-91 T 25-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class SMD_RS07870 f810433e6a2bd2c3e747000359b449e1 615 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 490 613 1.5E-48 T 25-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal SMD_RS16820 520afacba817fdb9498ac37724521e60 699 Pfam PF13692 Glycosyl transferases group 1 527 665 5.0E-25 T 25-04-2016 SMD_RS16820 520afacba817fdb9498ac37724521e60 699 PANTHER PTHR22916 22 304 9.1E-82 T 25-04-2016 SMD_RS16820 520afacba817fdb9498ac37724521e60 699 SUPERFAMILY SSF53756 355 695 1.13E-24 T 25-04-2016 SMD_RS16820 520afacba817fdb9498ac37724521e60 699 Pfam PF00535 Glycosyl transferase family 2 75 241 1.8E-24 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS16820 520afacba817fdb9498ac37724521e60 699 SUPERFAMILY SSF53448 64 315 1.69E-52 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS16820 520afacba817fdb9498ac37724521e60 699 PANTHER PTHR22916:SF26 22 304 9.1E-82 T 25-04-2016 SMD_RS16820 520afacba817fdb9498ac37724521e60 699 Gene3D G3DSA:3.90.550.10 72 313 1.7E-54 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 PANTHER PTHR38687:SF1 177 341 5.1E-40 T 25-04-2016 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 PANTHER PTHR38687:SF1 2 100 5.1E-40 T 25-04-2016 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 Pfam PF05036 Sporulation related domain 96 172 3.3E-13 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 Pfam PF05036 Sporulation related domain 266 339 3.5E-17 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 Gene3D G3DSA:3.30.70.1070 93 162 4.7E-12 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 Gene3D G3DSA:3.30.70.1070 261 339 3.2E-19 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 PANTHER PTHR38687 177 341 5.1E-40 T 25-04-2016 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 PANTHER PTHR38687 2 100 5.1E-40 T 25-04-2016 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 SUPERFAMILY SSF110997 98 159 2.62E-9 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS04440 6f35ae30f9fac2f34a2b9df3c0aeb2ae 342 SUPERFAMILY SSF110997 265 339 2.48E-16 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 PANTHER PTHR20881:SF3 8 270 1.4E-155 T 25-04-2016 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.788 T 25-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 264 1.8E-101 T 25-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 SUPERFAMILY SSF51621 10 269 5.1E-97 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 PIRSF PIRSF000388 1 271 4.1E-93 T 25-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 269 1.7E-95 T 25-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 PANTHER PTHR20881 8 270 1.4E-155 T 25-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMD_RS09070 0389eec10f66a4a6e81bfa251f8ed6c0 271 Gene3D G3DSA:3.20.20.60 8 269 7.4E-105 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 Gene3D G3DSA:1.25.40.10 149 255 7.8E-12 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 Pfam PF16331 TolA binding protein trimerisation 27 100 2.4E-18 T 25-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 Gene3D G3DSA:1.20.58.340 27 80 6.4E-4 T 25-04-2016 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 Pfam PF13525 Outer membrane lipoprotein 145 266 1.3E-11 T 25-04-2016 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 262 2.6E-38 T 25-04-2016 IPR014162 Tol-Pal system, YbgF SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 SUPERFAMILY SSF48452 148 258 7.79E-13 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 PANTHER PTHR26312:SF74 156 272 1.2E-15 T 25-04-2016 SMD_RS17180 33c21f4d67a89ee507aeb6445eb19f47 272 PANTHER PTHR26312 156 272 1.2E-15 T 25-04-2016 SMD_RS00165 2b47f054b692c91f67c2c39d48ed7305 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 135 1.8E-25 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS00165 2b47f054b692c91f67c2c39d48ed7305 137 PANTHER PTHR30558:SF3 9 135 9.0E-30 T 25-04-2016 SMD_RS00165 2b47f054b692c91f67c2c39d48ed7305 137 PANTHER PTHR30558 9 135 9.0E-30 T 25-04-2016 SMD_RS20720 5fdb8e9ddbb0ff766d9ce855ba4b3643 208 SUPERFAMILY SSF54001 25 204 1.03E-32 T 25-04-2016 SMD_RS20720 5fdb8e9ddbb0ff766d9ce855ba4b3643 208 Gene3D G3DSA:2.30.30.330 25 204 2.0E-37 T 25-04-2016 SMD_RS20720 5fdb8e9ddbb0ff766d9ce855ba4b3643 208 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 25 204 4.2E-34 T 25-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 20 281 55.898 T 25-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 Pfam PF01171 PP-loop family 51 215 9.3E-17 T 25-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 Gene3D G3DSA:3.40.50.620 33 216 2.7E-23 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 SUPERFAMILY SSF52402 28 246 4.79E-56 T 25-04-2016 SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 PANTHER PTHR11807:SF16 22 275 3.3E-109 T 25-04-2016 SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 PIRSF PIRSF004976 12 282 7.6E-72 T 25-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SMD_RS00425 a2aed7f7d400807157949665db40d83a 306 PANTHER PTHR11807 22 275 3.3E-109 T 25-04-2016 SMD_RS06695 86e5f95ea7eab66c4b773092beb0e212 439 PANTHER PTHR30092 1 437 8.0E-154 T 25-04-2016 SMD_RS06695 86e5f95ea7eab66c4b773092beb0e212 439 Pfam PF06123 Inner membrane protein CreD 6 432 2.1E-149 T 25-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD SMD_RS06695 86e5f95ea7eab66c4b773092beb0e212 439 PIRSF PIRSF004548 1 438 2.7E-149 T 25-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD SMD_RS14320 49d4dbe3909ddf31242b6a5b738f387c 314 Pfam PF06189 5'-nucleotidase 38 312 2.4E-108 T 25-04-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 SMD_RS14320 49d4dbe3909ddf31242b6a5b738f387c 314 PANTHER PTHR31367 1 313 1.6E-150 T 25-04-2016 SMD_RS14320 49d4dbe3909ddf31242b6a5b738f387c 314 PANTHER PTHR31367:SF5 1 313 1.6E-150 T 25-04-2016 SMD_RS15585 0146cabe5e756feabc9bd5e4e06bd70d 120 PANTHER PTHR33993 1 117 2.6E-53 T 25-04-2016 SMD_RS15585 0146cabe5e756feabc9bd5e4e06bd70d 120 SUPERFAMILY SSF54593 5 118 5.91E-20 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS15585 0146cabe5e756feabc9bd5e4e06bd70d 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 2.0E-5 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS15585 0146cabe5e756feabc9bd5e4e06bd70d 120 Gene3D G3DSA:3.10.180.10 7 116 5.5E-20 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS15585 0146cabe5e756feabc9bd5e4e06bd70d 120 PANTHER PTHR33993:SF1 1 117 2.6E-53 T 25-04-2016 SMD_RS07315 22f19fb593d6bb0f28a15294a5366260 545 PANTHER PTHR34219 1 514 2.5E-229 T 25-04-2016 SMD_RS07315 22f19fb593d6bb0f28a15294a5366260 545 PANTHER PTHR34219:SF4 1 514 2.5E-229 T 25-04-2016 SMD_RS07315 22f19fb593d6bb0f28a15294a5366260 545 Pfam PF03929 PepSY-associated TM region 10 370 1.0E-52 T 25-04-2016 IPR005625 PepSY-associated TM protein SMD_RS14835 5c428858519618563b7456932df09e05 149 Pfam PF03918 Cytochrome C biogenesis protein 9 137 8.4E-48 T 25-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family SMD_RS14835 5c428858519618563b7456932df09e05 149 PANTHER PTHR30009:SF7 1 135 4.3E-28 T 25-04-2016 SMD_RS14835 5c428858519618563b7456932df09e05 149 PANTHER PTHR30009 1 135 4.3E-28 T 25-04-2016 SMD_RS11285 bec6967178d72ffd856e0c294a81f7b0 177 PIRSF PIRSF036893 1 177 2.6E-38 T 25-04-2016 IPR022271 Lipocalin, ApoD type SMD_RS11285 bec6967178d72ffd856e0c294a81f7b0 177 SUPERFAMILY SSF50814 9 174 2.06E-31 T 25-04-2016 IPR011038 Calycin-like SMD_RS11285 bec6967178d72ffd856e0c294a81f7b0 177 PANTHER PTHR10612:SF7 3 175 1.5E-17 T 25-04-2016 SMD_RS11285 bec6967178d72ffd856e0c294a81f7b0 177 PANTHER PTHR10612 3 175 1.5E-17 T 25-04-2016 SMD_RS11285 bec6967178d72ffd856e0c294a81f7b0 177 Gene3D G3DSA:2.40.128.20 6 175 1.3E-34 T 25-04-2016 IPR012674 Calycin SMD_RS11285 bec6967178d72ffd856e0c294a81f7b0 177 Pfam PF08212 Lipocalin-like domain 33 174 3.3E-42 T 25-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SMD_RS14285 7b8d61eb80ab28ef1ce492fda201b425 173 Gene3D G3DSA:2.60.120.10 4 110 4.1E-21 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMD_RS14285 7b8d61eb80ab28ef1ce492fda201b425 173 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 6 163 2.0E-73 T 25-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 SMD_RS14285 7b8d61eb80ab28ef1ce492fda201b425 173 PANTHER PTHR15497 2 170 6.5E-86 T 25-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 SMD_RS14285 7b8d61eb80ab28ef1ce492fda201b425 173 SUPERFAMILY SSF51182 1 167 2.67E-56 T 25-04-2016 IPR011051 RmlC-like cupin domain SMD_RS14285 7b8d61eb80ab28ef1ce492fda201b425 173 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 2 168 35.823 T 25-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 SMD_RS14285 7b8d61eb80ab28ef1ce492fda201b425 173 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 3 149 5.1E-67 T 25-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 SMD_RS04265 668c0efb6ad9c52bb22e233bcfbf76ed 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 8.4E-44 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04265 668c0efb6ad9c52bb22e233bcfbf76ed 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 17.005 T 25-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SMD_RS04265 668c0efb6ad9c52bb22e233bcfbf76ed 147 PANTHER PTHR12934 3 147 3.8E-58 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMD_RS04265 668c0efb6ad9c52bb22e233bcfbf76ed 147 Gene3D G3DSA:3.100.10.10 34 146 1.7E-19 T 25-04-2016 SMD_RS04265 668c0efb6ad9c52bb22e233bcfbf76ed 147 SUPERFAMILY SSF52080 6 146 4.19E-40 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P SMD_RS04265 668c0efb6ad9c52bb22e233bcfbf76ed 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 146 6.1E-27 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 246 18.438 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 ProSitePatterns PS01218 TatC family signature. 156 175 - T 25-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 223 4.4E-66 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 PANTHER PTHR30371:SF0 2 239 1.1E-96 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 11 228 6.2E-68 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 PANTHER PTHR30371 2 239 1.1E-96 T 25-04-2016 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 87 105 9.3E-45 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 156 184 9.3E-45 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 10 37 9.3E-45 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS21645 4df2d3b047dd6d0185ab57a2db3a9a20 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 105 131 9.3E-45 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMD_RS01895 85835c5e2e328a1b3419f3947314521e 434 Gene3D G3DSA:1.20.1250.20 25 215 1.5E-13 T 25-04-2016 SMD_RS01895 85835c5e2e328a1b3419f3947314521e 434 Gene3D G3DSA:1.20.1250.20 246 424 1.2E-11 T 25-04-2016 SMD_RS01895 85835c5e2e328a1b3419f3947314521e 434 SUPERFAMILY SSF103473 26 428 3.92E-34 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS01895 85835c5e2e328a1b3419f3947314521e 434 PANTHER PTHR12778 26 421 6.3E-91 T 25-04-2016 SMD_RS01895 85835c5e2e328a1b3419f3947314521e 434 Pfam PF07690 Major Facilitator Superfamily 28 383 1.7E-22 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS13770 7fb8e12b40ac527f971600239a5eadce 134 Pfam PF04956 TrbC/VIRB2 family 9 109 2.0E-15 T 25-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 450 1.2E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 SMART SM00388 236 302 7.4E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 SMART SM00304 182 235 7.9E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PANTHER PTHR24423 3 11 2.1E-92 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PANTHER PTHR24423 176 450 2.1E-92 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PANTHER PTHR24423 66 134 2.1E-92 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 SUPERFAMILY SSF47384 219 302 1.77E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 Gene3D G3DSA:1.10.287.130 226 297 1.3E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 450 1.9E-124 T 25-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 SMART SM00387 345 453 2.4E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 5.7E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PANTHER PTHR24423:SF354 3 11 2.1E-92 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PANTHER PTHR24423:SF354 176 450 2.1E-92 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PANTHER PTHR24423:SF354 66 134 2.1E-92 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 SUPERFAMILY SSF158472 182 232 6.8E-7 T 25-04-2016 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 Gene3D G3DSA:3.30.565.10 307 452 5.1E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 2.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 2.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 2.3E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 Pfam PF00672 HAMP domain 163 232 7.5E-14 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS12410 d8be9bc766eb0905aa1cbd207ce96a0f 455 SUPERFAMILY SSF55874 292 450 1.57E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 SUPERFAMILY SSF53639 15 210 2.16E-43 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 SMART SM01007 18 206 1.5E-48 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 Gene3D G3DSA:3.40.225.10 15 211 1.7E-43 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 213 109.778 T 25-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 20 211 3.4E-71 T 25-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 205 4.3E-39 T 25-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMD_RS10390 58e21200fd62d607375b1a59a74821fb 213 PANTHER PTHR10640 15 211 1.1E-56 T 25-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 SMD_RS10095 467819c2154a00668e92d73ba931bf04 295 PANTHER PTHR22911 1 295 2.0E-126 T 25-04-2016 SMD_RS10095 467819c2154a00668e92d73ba931bf04 295 SUPERFAMILY SSF103481 36 137 1.12E-16 T 25-04-2016 SMD_RS10095 467819c2154a00668e92d73ba931bf04 295 PANTHER PTHR22911:SF56 1 295 2.0E-126 T 25-04-2016 SMD_RS10095 467819c2154a00668e92d73ba931bf04 295 Pfam PF00892 EamA-like transporter family 2 133 2.1E-19 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS10095 467819c2154a00668e92d73ba931bf04 295 Pfam PF00892 EamA-like transporter family 143 270 3.5E-14 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS10095 467819c2154a00668e92d73ba931bf04 295 SUPERFAMILY SSF103481 177 274 2.88E-16 T 25-04-2016 SMD_RS18645 06f7a2f27d6d6c496301e582c7d97867 183 Gene3D G3DSA:2.70.70.10 46 183 7.8E-31 T 25-04-2016 SMD_RS18645 06f7a2f27d6d6c496301e582c7d97867 183 Pfam PF01551 Peptidase family M23 80 177 3.7E-18 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS18645 06f7a2f27d6d6c496301e582c7d97867 183 SUPERFAMILY SSF51261 59 182 6.8E-28 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS18645 06f7a2f27d6d6c496301e582c7d97867 183 PANTHER PTHR21666 16 183 1.3E-21 T 25-04-2016 SMD_RS13175 0b2b213b00543f34b929e2e646eff1e9 296 Gene3D G3DSA:1.25.40.10 46 220 1.1E-15 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS13175 0b2b213b00543f34b929e2e646eff1e9 296 SUPERFAMILY SSF48452 80 204 4.0E-14 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS13175 0b2b213b00543f34b929e2e646eff1e9 296 SMART SM00028 147 180 0.11 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS13175 0b2b213b00543f34b929e2e646eff1e9 296 SMART SM00028 113 146 200.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 Gene3D G3DSA:1.20.1250.20 47 213 1.2E-23 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 Gene3D G3DSA:1.20.1250.20 292 470 1.9E-13 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 156 9.8E-8 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 423 442 9.8E-8 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 191 215 9.8E-8 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 166 190 9.8E-8 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PANTHER PTHR23501 18 260 3.7E-78 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PANTHER PTHR23501 276 472 3.7E-78 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 SUPERFAMILY SSF103473 18 223 2.75E-44 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 SUPERFAMILY SSF103473 270 471 2.75E-44 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 Pfam PF07690 Major Facilitator Superfamily 51 428 4.6E-34 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PANTHER PTHR23501:SF91 18 260 3.7E-78 T 25-04-2016 SMD_RS05305 8b25b4d9d53cfc1e492920fc36e7b19b 473 PANTHER PTHR23501:SF91 276 472 3.7E-78 T 25-04-2016 SMD_RS07510 5803aa915ff9ff9db8fd9c2bac5fa6fc 116 Pfam PF11743 Protein of unknown function (DUF3301) 4 97 3.3E-30 T 25-04-2016 IPR021732 Protein of unknown function DUF3301 SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 Gene3D G3DSA:3.40.50.300 30 274 4.5E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 SUPERFAMILY SSF52540 184 221 3.89E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 SUPERFAMILY SSF52540 18 157 3.89E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 PANTHER PTHR10285 193 244 1.3E-46 T 25-04-2016 SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 PANTHER PTHR10285 34 159 1.3E-46 T 25-04-2016 SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 PANTHER PTHR10285:SF78 193 244 1.3E-46 T 25-04-2016 SMD_RS16515 e910fdece18b3a86cbae70892a3c52a9 275 PANTHER PTHR10285:SF78 34 159 1.3E-46 T 25-04-2016 SMD_RS01110 e727f8445f8ee62083a4bd5cc8ed761f 211 Pfam PF02036 SCP-2 sterol transfer family 21 122 3.6E-15 T 25-04-2016 IPR003033 SCP2 sterol-binding domain SMD_RS01110 e727f8445f8ee62083a4bd5cc8ed761f 211 PANTHER PTHR38693:SF1 2 208 9.9E-53 T 25-04-2016 SMD_RS01110 e727f8445f8ee62083a4bd5cc8ed761f 211 PANTHER PTHR38693 2 208 9.9E-53 T 25-04-2016 SMD_RS04725 ae17653758f1032baa7d9362e6ade6d6 110 Pfam PF01381 Helix-turn-helix 24 73 3.5E-7 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS04725 ae17653758f1032baa7d9362e6ade6d6 110 SUPERFAMILY SSF47413 19 79 1.6E-10 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS04725 ae17653758f1032baa7d9362e6ade6d6 110 Gene3D G3DSA:1.10.260.40 16 80 7.5E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS04725 ae17653758f1032baa7d9362e6ade6d6 110 SMART SM00530 23 76 3.1E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMD_RS08025 d855c479f53ce35f46744f9fac99925f 196 SUPERFAMILY SSF53955 103 176 4.13E-16 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS08025 d855c479f53ce35f46744f9fac99925f 196 SUPERFAMILY SSF53955 33 75 4.13E-16 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS08025 d855c479f53ce35f46744f9fac99925f 196 Pfam PF01464 Transglycosylase SLT domain 36 157 1.6E-6 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS08025 d855c479f53ce35f46744f9fac99925f 196 Gene3D G3DSA:1.10.530.10 34 157 1.3E-11 T 25-04-2016 SMD_RS06775 9df457ccd9cf1773406d0fafdb7ab36b 129 SUPERFAMILY SSF161084 3 129 5.62E-30 T 25-04-2016 SMD_RS06775 9df457ccd9cf1773406d0fafdb7ab36b 129 Pfam PF01124 MAPEG family 8 128 6.1E-25 T 25-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein SMD_RS06775 9df457ccd9cf1773406d0fafdb7ab36b 129 Gene3D G3DSA:1.20.120.550 7 128 6.5E-19 T 25-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain SMD_RS16630 7c57c00e0f94dadfd35581feb56394c8 339 PANTHER PTHR10859 9 306 1.6E-132 T 25-04-2016 SMD_RS16630 7c57c00e0f94dadfd35581feb56394c8 339 SUPERFAMILY SSF53448 7 260 2.01E-29 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS16630 7c57c00e0f94dadfd35581feb56394c8 339 Pfam PF00535 Glycosyl transferase family 2 8 158 8.4E-22 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS16630 7c57c00e0f94dadfd35581feb56394c8 339 PANTHER PTHR10859:SF86 9 306 1.6E-132 T 25-04-2016 SMD_RS16630 7c57c00e0f94dadfd35581feb56394c8 339 Gene3D G3DSA:3.90.550.10 4 138 1.1E-13 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 239 257 2.3E-46 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 316 337 2.3E-46 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 424 442 2.3E-46 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 442 456 2.3E-46 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 469 2.3E-46 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 134 153 2.3E-46 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 SUPERFAMILY SSF53697 3 488 2.22E-159 T 25-04-2016 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 Gene3D G3DSA:1.10.1390.10 466 503 1.3E-11 T 25-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 Pfam PF00342 Phosphoglucose isomerase 47 495 1.4E-150 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 Gene3D G3DSA:3.40.50.10490 122 269 2.7E-49 T 25-04-2016 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 456 473 - T 25-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 40 483 37.979 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 PANTHER PTHR11469 1 504 4.1E-201 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 Gene3D G3DSA:3.40.50.10490 271 465 8.1E-105 T 25-04-2016 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 Gene3D G3DSA:3.40.50.10490 7 92 8.1E-105 T 25-04-2016 SMD_RS09085 60046dca6ad72f709689afd6f34a5ee5 504 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 243 256 - T 25-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS02845 18a2bf53f4bb0146d356988873c75815 329 SUPERFAMILY SSF56529 77 323 1.31E-52 T 25-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMD_RS02845 18a2bf53f4bb0146d356988873c75815 329 Gene3D G3DSA:3.90.850.10 67 307 2.3E-35 T 25-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMD_RS02845 18a2bf53f4bb0146d356988873c75815 329 PANTHER PTHR11820:SF85 8 328 1.0E-149 T 25-04-2016 SMD_RS02845 18a2bf53f4bb0146d356988873c75815 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 2.9E-33 T 25-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMD_RS02845 18a2bf53f4bb0146d356988873c75815 329 PANTHER PTHR11820 8 328 1.0E-149 T 25-04-2016 SMD_RS03610 a1fce1f4e8c4ce19229669090aaa73ad 275 PANTHER PTHR10108 19 261 1.9E-28 T 25-04-2016 SMD_RS03610 a1fce1f4e8c4ce19229669090aaa73ad 275 Pfam PF08241 Methyltransferase domain 46 142 2.1E-21 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS03610 a1fce1f4e8c4ce19229669090aaa73ad 275 Gene3D G3DSA:3.40.50.150 38 236 2.4E-35 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03610 a1fce1f4e8c4ce19229669090aaa73ad 275 SUPERFAMILY SSF53335 28 229 1.53E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 SMART SM01097 3 133 9.2E-89 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 1.0E-144 T 25-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 48.125 T 25-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PANTHER PTHR11405 3 375 1.5E-234 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 241 3.5E-10 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 345 358 3.5E-10 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 260 271 3.5E-10 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 7.7E-38 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 276 7.7E-38 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 243 7.7E-38 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 294 7.7E-38 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 313 7.7E-38 T 25-04-2016 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 Gene3D G3DSA:3.40.50.880 153 374 5.5E-80 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 SUPERFAMILY SSF52317 153 372 1.19E-59 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 Pfam PF00117 Glutamine amidotransferase class-I 193 367 1.1E-44 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 Gene3D G3DSA:3.50.30.20 4 145 4.5E-61 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 4.5E-53 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS10525 274e869203dde260d654ee8c6e49a854 375 SUPERFAMILY SSF52021 4 149 8.24E-57 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMD_RS18710 2df8e9833757b1fd09b15638a1f087d0 355 Pfam PF07786 Protein of unknown function (DUF1624) 8 154 7.7E-12 T 25-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 SMD_RS18710 2df8e9833757b1fd09b15638a1f087d0 355 PANTHER PTHR31061 6 355 2.8E-57 T 25-04-2016 SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 Pfam PF00515 Tetratricopeptide repeat 398 427 2.5E-9 T 25-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 SUPERFAMILY SSF53300 100 275 1.48E-17 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 Gene3D G3DSA:1.25.40.10 370 445 7.2E-13 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 Gene3D G3DSA:3.40.50.410 102 269 3.0E-7 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 PANTHER PTHR22550:SF5 11 525 3.0E-61 T 25-04-2016 SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 SMART SM00028 396 429 4.1E-6 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 SMART SM00327 99 288 1.7E-9 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 Pfam PF13519 von Willebrand factor type A domain 102 208 5.0E-11 T 25-04-2016 IPR002035 von Willebrand factor, type A SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 PANTHER PTHR22550 11 525 3.0E-61 T 25-04-2016 SMD_RS17750 0b47ec09b243a8c80f608ddc1fad39dd 612 SUPERFAMILY SSF48452 371 442 3.37E-11 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS20290 9fca8c954ee59f907af1081b8cf33fb2 160 SUPERFAMILY SSF55729 5 152 1.22E-35 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS20290 9fca8c954ee59f907af1081b8cf33fb2 160 Pfam PF00583 Acetyltransferase (GNAT) family 58 138 1.2E-14 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS20290 9fca8c954ee59f907af1081b8cf33fb2 160 PANTHER PTHR10545 6 159 2.4E-61 T 25-04-2016 SMD_RS20290 9fca8c954ee59f907af1081b8cf33fb2 160 Gene3D G3DSA:3.40.630.30 4 158 9.0E-59 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS17165 dd61aa188174b260b97588d5814bcb60 318 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 187 289 4.5E-6 T 25-04-2016 IPR018728 Domain of unknown function DUF2268 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 1.8E-41 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 1.8E-41 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 1.8E-41 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 1.8E-41 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 1.8E-41 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PANTHER PTHR22855:SF17 1 290 4.3E-162 T 25-04-2016 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 Pfam PF01039 Carboxyl transferase domain 102 243 7.1E-17 T 25-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 PANTHER PTHR22855 1 290 4.3E-162 T 25-04-2016 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 37.989 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 SUPERFAMILY SSF52096 28 286 1.36E-84 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 2.4E-126 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMD_RS15525 78b22613a4dfdc20ac0f5b73898b102d 291 Gene3D G3DSA:3.90.226.10 21 287 3.7E-74 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PANTHER PTHR22773 1 544 4.2E-231 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 Pfam PF00361 Proton-conducting membrane transporter 128 409 4.4E-63 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 115 4.1E-10 T 25-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SMD_RS20315 e20100598041d1771039a137a3fb724e 942 Pfam PF13244 Domain of unknown function (DUF4040) 612 675 1.2E-17 T 25-04-2016 IPR025383 Domain of unknown function DUF4040 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PANTHER PTHR22773:SF46 1 544 4.2E-231 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 4.0E-36 T 25-04-2016 SMD_RS20315 e20100598041d1771039a137a3fb724e 942 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 907 2.9E-30 T 25-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein SMD_RS18790 1ed5d880af4c381c328d724127841e4d 127 PANTHER PTHR34606 48 124 5.9E-24 T 25-04-2016 SMD_RS18790 1ed5d880af4c381c328d724127841e4d 127 SMART SM00749 59 122 2.2E-7 T 25-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SMD_RS18790 1ed5d880af4c381c328d724127841e4d 127 Pfam PF04972 BON domain 54 121 2.5E-18 T 25-04-2016 IPR007055 BON domain SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 SUPERFAMILY SSF51905 269 375 5.44E-47 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 SUPERFAMILY SSF51905 5 179 5.44E-47 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 Gene3D G3DSA:3.50.50.60 270 354 2.6E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 Gene3D G3DSA:3.50.50.60 4 184 2.6E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.2E-17 T 25-04-2016 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 3.2E-17 T 25-04-2016 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 3.2E-17 T 25-04-2016 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 3.2E-17 T 25-04-2016 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 2.1E-100 T 25-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 Pfam PF01494 FAD binding domain 5 347 7.8E-30 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 388 9.3E-120 T 25-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 PANTHER PTHR13789 3 389 7.8E-137 T 25-04-2016 SMD_RS03785 fd70c447c8e36f1c1bf4e478dc72247f 402 PANTHER PTHR13789:SF214 3 389 7.8E-137 T 25-04-2016 SMD_RS15050 6f30c3f63a6a3ac1524429fdb2f3e768 288 Hamap MF_00188 Protease HtpX [htpX]. 2 285 25.547 T 25-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SMD_RS15050 6f30c3f63a6a3ac1524429fdb2f3e768 288 Gene3D G3DSA:3.30.2010.10 69 157 2.5E-33 T 25-04-2016 SMD_RS15050 6f30c3f63a6a3ac1524429fdb2f3e768 288 Pfam PF01435 Peptidase family M48 74 284 9.6E-42 T 25-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SMD_RS15050 6f30c3f63a6a3ac1524429fdb2f3e768 288 PANTHER PTHR10120 1 285 3.6E-98 T 25-04-2016 SMD_RS15050 6f30c3f63a6a3ac1524429fdb2f3e768 288 PANTHER PTHR10120:SF19 1 285 3.6E-98 T 25-04-2016 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 SUPERFAMILY SSF54719 88 201 1.96E-44 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 SUPERFAMILY SSF46609 1 90 1.7E-37 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PIRSF PIRSF000349 1 203 2.5E-81 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 3.5E-39 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 9.1E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.1E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 9.1E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 9.1E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.1E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-33 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 25-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 PANTHER PTHR11404 1 203 7.7E-112 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMD_RS14660 05eb826f9ed08bdd8b54072262b14e43 203 Gene3D G3DSA:1.10.287.990 20 89 7.9E-31 T 25-04-2016 SMD_RS02475 19e2a4facdfb17b603094e6961be48c3 258 SUPERFAMILY SSF53955 119 247 1.22E-44 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS02475 19e2a4facdfb17b603094e6961be48c3 258 Gene3D G3DSA:1.10.530.10 116 247 1.4E-43 T 25-04-2016 SMD_RS02475 19e2a4facdfb17b603094e6961be48c3 258 Pfam PF01464 Transglycosylase SLT domain 127 224 1.9E-25 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS02475 19e2a4facdfb17b603094e6961be48c3 258 PANTHER PTHR21666 120 252 2.3E-36 T 25-04-2016 SMD_RS02475 19e2a4facdfb17b603094e6961be48c3 258 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 144 172 - T 25-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SMD_RS18405 2f6feabb9809bed5b607432ce352368a 442 PANTHER PTHR10283:SF87 9 438 1.2E-196 T 25-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 SMD_RS18405 2f6feabb9809bed5b607432ce352368a 442 TIGRFAM TIGR00784 citMHS: citrate transporter 1 437 2.1E-189 T 25-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 SMD_RS18405 2f6feabb9809bed5b607432ce352368a 442 PANTHER PTHR10283 9 438 1.2E-196 T 25-04-2016 SMD_RS18405 2f6feabb9809bed5b607432ce352368a 442 Pfam PF03600 Citrate transporter 13 386 1.9E-57 T 25-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SMD_RS10015 c5a09c4534c59d770464b6c1a549df92 183 SUPERFAMILY SSF55729 13 164 2.06E-20 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10015 c5a09c4534c59d770464b6c1a549df92 183 Gene3D G3DSA:3.40.630.30 43 144 4.3E-20 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS10015 c5a09c4534c59d770464b6c1a549df92 183 Pfam PF00583 Acetyltransferase (GNAT) family 73 143 3.7E-11 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS10015 c5a09c4534c59d770464b6c1a549df92 183 PANTHER PTHR13947 75 176 5.3E-17 T 25-04-2016 SMD_RS05585 d2e357157d7f79fa6ae84308cdc3724e 323 Pfam PF02424 ApbE family 16 296 5.4E-81 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMD_RS05585 d2e357157d7f79fa6ae84308cdc3724e 323 PANTHER PTHR30040:SF3 7 322 4.6E-117 T 25-04-2016 SMD_RS05585 d2e357157d7f79fa6ae84308cdc3724e 323 SUPERFAMILY SSF143631 10 317 4.71E-90 T 25-04-2016 IPR003374 ApbE-like domain SMD_RS05585 d2e357157d7f79fa6ae84308cdc3724e 323 PIRSF PIRSF006268 2 316 3.4E-79 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMD_RS05585 d2e357157d7f79fa6ae84308cdc3724e 323 PANTHER PTHR30040 7 322 4.6E-117 T 25-04-2016 SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 Pfam PF04337 Protein of unknown function, DUF480 13 157 2.6E-54 T 25-04-2016 IPR007432 Protein of unknown function DUF480 SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 13 216 29.928 T 25-04-2016 IPR007432 Protein of unknown function DUF480 SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 Gene3D G3DSA:1.10.10.10 3 95 3.9E-37 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 Gene3D G3DSA:1.10.10.10 97 171 2.5E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 PANTHER PTHR38768:SF1 1 216 1.4E-77 T 25-04-2016 SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 SUPERFAMILY SSF46785 94 171 7.04E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 SUPERFAMILY SSF46785 9 90 3.72E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00390 2e826455ab88d7af64c89777aafc5331 216 PANTHER PTHR38768 1 216 1.4E-77 T 25-04-2016 SMD_RS17200 c55acd48504db53facf06e59a242a931 142 PANTHER PTHR30558:SF7 7 141 4.6E-49 T 25-04-2016 SMD_RS17200 c55acd48504db53facf06e59a242a931 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 140 1.3E-27 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS17200 c55acd48504db53facf06e59a242a931 142 PANTHER PTHR30558 7 141 4.6E-49 T 25-04-2016 SMD_RS17200 c55acd48504db53facf06e59a242a931 142 TIGRFAM TIGR02801 tolR: protein TolR 14 140 3.2E-42 T 25-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 Pfam PF00271 Helicase conserved C-terminal domain 235 343 2.8E-27 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 PANTHER PTHR24031 499 514 3.9E-246 T 25-04-2016 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 PANTHER PTHR24031 539 644 3.9E-246 T 25-04-2016 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 PANTHER PTHR24031 1 474 3.9E-246 T 25-04-2016 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 PANTHER PTHR24031:SF261 499 514 3.9E-246 T 25-04-2016 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 PANTHER PTHR24031:SF261 539 644 3.9E-246 T 25-04-2016 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 PANTHER PTHR24031:SF261 1 474 3.9E-246 T 25-04-2016 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 SMART SM00487 28 226 5.7E-64 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 Pfam PF03880 DbpA RNA binding domain 511 581 3.1E-23 T 25-04-2016 IPR005580 DbpA, RNA-binding domain SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 SMART SM00490 262 343 1.5E-32 T 25-04-2016 IPR001650 Helicase, C-terminal SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 25-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 Pfam PF00270 DEAD/DEAH box helicase 34 198 5.4E-52 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 583 47.13 T 25-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 SUPERFAMILY SSF52540 78 364 4.39E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 Gene3D G3DSA:3.40.50.300 210 377 6.6E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS06790 eaa8fe63693b0df12f4e1506da08992e 645 Gene3D G3DSA:3.40.50.300 5 209 3.3E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02340 9cc4f1d3e21de442ee424b185430be13 308 PANTHER PTHR35243:SF9 204 297 1.7E-29 T 25-04-2016 SMD_RS02340 9cc4f1d3e21de442ee424b185430be13 308 PANTHER PTHR35243 204 297 1.7E-29 T 25-04-2016 SMD_RS19455 4657d6b59065fdf0f501e7f21c81fa45 75 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 64 8.3E-8 T 25-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) SMD_RS15445 87986b4b0ce2ead60a6f547c47e74fd0 364 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 358 24.124 T 25-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMD_RS15445 87986b4b0ce2ead60a6f547c47e74fd0 364 PANTHER PTHR11432 14 363 3.7E-159 T 25-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMD_RS15445 87986b4b0ce2ead60a6f547c47e74fd0 364 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 25-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SMD_RS15445 87986b4b0ce2ead60a6f547c47e74fd0 364 PANTHER PTHR11432:SF3 14 363 3.7E-159 T 25-04-2016 SMD_RS15445 87986b4b0ce2ead60a6f547c47e74fd0 364 Pfam PF00146 NADH dehydrogenase 31 352 8.2E-118 T 25-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMD_RS18830 05e668dd869c1c237e02f12304ac419f 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 6.5E-19 T 25-04-2016 IPR007454 Uncharacterised protein family UPF0250 SMD_RS18830 05e668dd869c1c237e02f12304ac419f 92 SUPERFAMILY SSF117991 6 92 1.44E-18 T 25-04-2016 IPR027471 YbeD-like domain SMD_RS18830 05e668dd869c1c237e02f12304ac419f 92 Gene3D G3DSA:3.30.70.1460 9 92 1.5E-14 T 25-04-2016 IPR027471 YbeD-like domain SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 Pfam PF00072 Response regulator receiver domain 14 125 3.4E-9 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 SUPERFAMILY SSF46894 135 203 3.74E-15 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 SMART SM00421 145 202 8.4E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 PANTHER PTHR26402 10 204 2.2E-27 T 25-04-2016 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 Gene3D G3DSA:3.40.50.2300 8 149 6.7E-16 T 25-04-2016 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 200 9.8E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 SUPERFAMILY SSF52172 10 137 2.42E-11 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 Gene3D G3DSA:1.10.10.10 150 203 2.3E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 PANTHER PTHR26402:SF458 10 204 2.2E-27 T 25-04-2016 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.2E-6 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.2E-6 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.2E-6 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS11275 ba9f8aba1cdbe11867ef5c760fc12bb3 208 SMART SM00448 10 125 2.2E-4 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS07320 ea2cf7331d674e69db8bfcb033475796 104 Pfam PF12365 Protein of unknown function (DUF3649) 73 97 2.1E-7 T 25-04-2016 IPR022109 Protein of unknown function DUF3649 SMD_RS18595 a65a69c0e457c6aa494f960bd96ed8c4 234 PANTHER PTHR31851 9 229 4.5E-65 T 25-04-2016 SMD_RS18595 a65a69c0e457c6aa494f960bd96ed8c4 234 Pfam PF01988 VIT family 19 227 2.7E-57 T 25-04-2016 IPR008217 Ccc1 family SMD_RS07655 a947caa93b95dcdf5f4805217f23df20 220 PANTHER PTHR30625:SF0 1 218 7.7E-54 T 25-04-2016 SMD_RS07655 a947caa93b95dcdf5f4805217f23df20 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 188 1.3E-32 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS07655 a947caa93b95dcdf5f4805217f23df20 220 PANTHER PTHR30625 1 218 7.7E-54 T 25-04-2016 SMD_RS09450 735fb8c0a99acf38a909974918a1f615 130 PANTHER PTHR37482:SF1 1 127 1.5E-40 T 25-04-2016 SMD_RS09450 735fb8c0a99acf38a909974918a1f615 130 PANTHER PTHR37482 1 127 1.5E-40 T 25-04-2016 SMD_RS09450 735fb8c0a99acf38a909974918a1f615 130 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 110 30.214 T 25-04-2016 IPR026592 Outer membrane protein assembly factor BamE SMD_RS09450 735fb8c0a99acf38a909974918a1f615 130 Pfam PF04355 SmpA / OmlA family 28 98 1.9E-20 T 25-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 SMD_RS09550 6f3f9d7acff914d96bdac447811c19bb 498 SUPERFAMILY SSF53383 73 487 8.61E-53 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS09550 6f3f9d7acff914d96bdac447811c19bb 498 Gene3D G3DSA:3.40.640.10 121 374 2.9E-33 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS09550 6f3f9d7acff914d96bdac447811c19bb 498 Gene3D G3DSA:3.90.1150.10 375 488 2.4E-11 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS09550 6f3f9d7acff914d96bdac447811c19bb 498 PANTHER PTHR11986:SF17 1 494 4.2E-80 T 25-04-2016 SMD_RS09550 6f3f9d7acff914d96bdac447811c19bb 498 Pfam PF00202 Aminotransferase class-III 84 486 1.6E-36 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS09550 6f3f9d7acff914d96bdac447811c19bb 498 PANTHER PTHR11986 1 494 4.2E-80 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMD_RS20995 bb5935f9c1291660f1c9dc55e0c8833d 287 Pfam PF07676 WD40-like Beta Propeller Repeat 87 114 0.01 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS20995 bb5935f9c1291660f1c9dc55e0c8833d 287 Pfam PF07676 WD40-like Beta Propeller Repeat 130 167 1.5E-5 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS20995 bb5935f9c1291660f1c9dc55e0c8833d 287 Pfam PF07676 WD40-like Beta Propeller Repeat 34 66 1.3E-4 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS20995 bb5935f9c1291660f1c9dc55e0c8833d 287 SUPERFAMILY SSF82171 43 208 3.92E-13 T 25-04-2016 SMD_RS20995 bb5935f9c1291660f1c9dc55e0c8833d 287 Gene3D G3DSA:2.120.10.30 36 217 3.4E-17 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 PANTHER PTHR11113:SF7 319 414 2.3E-26 T 25-04-2016 SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 SUPERFAMILY SSF51556 135 367 2.92E-6 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 Pfam PF01979 Amidohydrolase family 290 383 2.0E-11 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 Gene3D G3DSA:2.30.40.10 303 399 1.1E-18 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 PANTHER PTHR11113 319 414 2.3E-26 T 25-04-2016 SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 Gene3D G3DSA:2.30.40.10 23 112 1.4E-17 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 SUPERFAMILY SSF51338 366 412 1.75E-23 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18475 fb167c4b73be9179672b840ef7b1ad4d 420 SUPERFAMILY SSF51338 23 85 1.75E-23 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS17685 8f86c4871634f5fd874641ca7ae00c9e 209 SUPERFAMILY SSF56925 27 209 3.66E-26 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS17685 8f86c4871634f5fd874641ca7ae00c9e 209 PANTHER PTHR36920:SF1 2 209 1.1E-67 T 25-04-2016 SMD_RS17685 8f86c4871634f5fd874641ca7ae00c9e 209 PANTHER PTHR36920 2 209 1.1E-67 T 25-04-2016 SMD_RS17685 8f86c4871634f5fd874641ca7ae00c9e 209 Pfam PF03922 OmpW family 28 209 1.8E-46 T 25-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 SMD_RS17685 8f86c4871634f5fd874641ca7ae00c9e 209 Gene3D G3DSA:2.40.160.20 26 209 2.6E-55 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS09105 e462f4d522e0e05a634ba30537d0585d 249 PANTHER PTHR14969 58 228 7.9E-34 T 25-04-2016 SMD_RS09105 e462f4d522e0e05a634ba30537d0585d 249 SUPERFAMILY SSF48317 42 234 2.09E-39 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS09105 e462f4d522e0e05a634ba30537d0585d 249 Gene3D G3DSA:1.20.144.10 56 223 1.2E-35 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS09105 e462f4d522e0e05a634ba30537d0585d 249 SMART SM00014 112 221 2.8E-18 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS09105 e462f4d522e0e05a634ba30537d0585d 249 Pfam PF01569 PAP2 superfamily 113 226 6.8E-22 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMD_RS04480 0e56190d739cbf69964270404e413c77 381 Pfam PF00534 Glycosyl transferases group 1 190 346 1.4E-25 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMD_RS04480 0e56190d739cbf69964270404e413c77 381 PANTHER PTHR12526:SF363 1 373 1.4E-108 T 25-04-2016 SMD_RS04480 0e56190d739cbf69964270404e413c77 381 SUPERFAMILY SSF53756 2 370 1.6E-73 T 25-04-2016 SMD_RS04480 0e56190d739cbf69964270404e413c77 381 PANTHER PTHR12526 1 373 1.4E-108 T 25-04-2016 SMD_RS04480 0e56190d739cbf69964270404e413c77 381 Pfam PF13439 Glycosyltransferase Family 4 14 179 1.2E-23 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMD_RS04480 0e56190d739cbf69964270404e413c77 381 Gene3D G3DSA:3.40.50.2000 175 346 1.6E-24 T 25-04-2016 SMD_RS14530 2ae2d8d1235ca380a80f763f78f4a4ca 281 Pfam PF05433 Glycine zipper 2TM domain 127 167 4.6E-11 T 25-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SMD_RS14530 2ae2d8d1235ca380a80f763f78f4a4ca 281 PANTHER PTHR35603:SF2 66 246 8.3E-70 T 25-04-2016 SMD_RS14530 2ae2d8d1235ca380a80f763f78f4a4ca 281 PANTHER PTHR35603 66 246 8.3E-70 T 25-04-2016 SMD_RS00715 006aebbbf84d011111be8b1e2d4eec9f 270 SUPERFAMILY SSF56935 21 269 4.95E-45 T 25-04-2016 SMD_RS00715 006aebbbf84d011111be8b1e2d4eec9f 270 Gene3D G3DSA:2.40.170.20 24 269 3.8E-50 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS00715 006aebbbf84d011111be8b1e2d4eec9f 270 PANTHER PTHR32552 66 270 1.1E-23 T 25-04-2016 SMD_RS00715 006aebbbf84d011111be8b1e2d4eec9f 270 Pfam PF00593 TonB dependent receptor 37 269 2.3E-28 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 PANTHER PTHR22911 1 298 7.3E-137 T 25-04-2016 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 Pfam PF00892 EamA-like transporter family 11 146 2.1E-12 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 Pfam PF00892 EamA-like transporter family 155 287 2.1E-8 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 PANTHER PTHR22911:SF41 1 298 7.3E-137 T 25-04-2016 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 TIGRFAM TIGR00688 rarD: protein RarD 10 263 8.0E-65 T 25-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 SUPERFAMILY SSF103481 58 147 4.58E-11 T 25-04-2016 SMD_RS01655 99ca850350650ef46c5a2f167111abe1 298 SUPERFAMILY SSF103481 206 289 2.09E-11 T 25-04-2016 SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 SUPERFAMILY SSF52540 10 215 7.97E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 PANTHER PTHR21343 9 225 2.8E-96 T 25-04-2016 SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 8 217 28.058 T 25-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 Gene3D G3DSA:3.40.50.300 9 221 3.2E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 Pfam PF13500 AAA domain 10 216 9.5E-40 T 25-04-2016 SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 PANTHER PTHR21343:SF13 9 225 2.8E-96 T 25-04-2016 SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 PIRSF PIRSF006755 8 226 1.1E-72 T 25-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS02770 d8ac17c26356acdf21bb10b67e689d1d 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 12 182 3.2E-47 T 25-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SMD_RS17975 ccb1a40b7f67b2445e4bdb50b4b5f807 182 SUPERFAMILY SSF101327 5 169 5.75E-29 T 25-04-2016 IPR011978 Uncharacterised protein family UPF0149 SMD_RS17975 ccb1a40b7f67b2445e4bdb50b4b5f807 182 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 168 8.3E-24 T 25-04-2016 IPR011978 Uncharacterised protein family UPF0149 SMD_RS17975 ccb1a40b7f67b2445e4bdb50b4b5f807 182 PANTHER PTHR37528 1 182 2.2E-24 T 25-04-2016 SMD_RS16785 205ed70cda4800b5fe40f2cdd9a2c273 133 Pfam PF00072 Response regulator receiver domain 16 127 3.9E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16785 205ed70cda4800b5fe40f2cdd9a2c273 133 PANTHER PTHR26402:SF568 14 132 1.9E-94 T 25-04-2016 SMD_RS16785 205ed70cda4800b5fe40f2cdd9a2c273 133 SMART SM00448 14 127 1.9E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS16785 205ed70cda4800b5fe40f2cdd9a2c273 133 PANTHER PTHR26402 14 132 1.9E-94 T 25-04-2016 SMD_RS16785 205ed70cda4800b5fe40f2cdd9a2c273 133 Gene3D G3DSA:3.40.50.2300 13 132 2.2E-36 T 25-04-2016 SMD_RS16785 205ed70cda4800b5fe40f2cdd9a2c273 133 SUPERFAMILY SSF52172 13 132 4.84E-36 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS10075 6298d7c68739da710309d99e5cbfd2d1 267 Gene3D G3DSA:3.90.1200.10 99 267 2.5E-46 T 25-04-2016 SMD_RS10075 6298d7c68739da710309d99e5cbfd2d1 267 Gene3D G3DSA:3.30.200.20 12 97 1.1E-26 T 25-04-2016 SMD_RS10075 6298d7c68739da710309d99e5cbfd2d1 267 PIRSF PIRSF000706 7 267 4.5E-91 T 25-04-2016 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 SMD_RS10075 6298d7c68739da710309d99e5cbfd2d1 267 SUPERFAMILY SSF56112 14 267 4.23E-53 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS10075 6298d7c68739da710309d99e5cbfd2d1 267 Pfam PF01636 Phosphotransferase enzyme family 48 260 1.9E-33 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 Gene3D G3DSA:1.10.10.640 184 210 6.7E-11 T 25-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 Gene3D G3DSA:1.10.10.640 85 124 6.7E-11 T 25-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 Gene3D G3DSA:3.10.450.50 39 83 3.7E-21 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 Gene3D G3DSA:3.10.450.50 128 183 3.7E-21 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 PIRSF PIRSF004649 1 221 7.6E-53 T 25-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 Pfam PF05494 MlaC protein 47 209 1.6E-42 T 25-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SMD_RS21860 3b5bdfbdb2980b73d6e9314eeb589516 222 PANTHER PTHR36573 3 222 3.3E-59 T 25-04-2016 SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 PANTHER PTHR11472:SF32 9 697 5.7E-262 T 25-04-2016 SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 Gene3D G3DSA:3.40.50.300 526 677 3.1E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 Gene3D G3DSA:3.40.50.300 224 270 2.0E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 Gene3D G3DSA:3.40.50.300 39 136 2.0E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 Pfam PF13307 Helicase C-terminal domain 539 694 4.2E-30 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 PANTHER PTHR11472 9 697 5.7E-262 T 25-04-2016 SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 SUPERFAMILY SSF52540 49 104 4.39E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 SUPERFAMILY SSF52540 503 676 4.39E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 SUPERFAMILY SSF52540 461 475 4.39E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 SUPERFAMILY SSF52540 207 287 4.39E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20980 d8d66cc3488f14a86d20343e8ff96dd8 700 SMART SM00491 550 681 2.5E-26 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SMD_RS18010 e317186048c8e4e2fcb0601d9fbd1644 281 Gene3D G3DSA:1.25.40.10 194 268 3.8E-10 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS18010 e317186048c8e4e2fcb0601d9fbd1644 281 Pfam PF13371 Tetratricopeptide repeat 199 270 4.5E-15 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS18010 e317186048c8e4e2fcb0601d9fbd1644 281 PANTHER PTHR31350:SF1 11 263 1.2E-53 T 25-04-2016 SMD_RS18010 e317186048c8e4e2fcb0601d9fbd1644 281 SUPERFAMILY SSF48452 195 266 2.23E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS18010 e317186048c8e4e2fcb0601d9fbd1644 281 Pfam PF13369 Transglutaminase-like superfamily 45 197 2.6E-46 T 25-04-2016 IPR032698 Protein SirB1, N-terminal SMD_RS18010 e317186048c8e4e2fcb0601d9fbd1644 281 PANTHER PTHR31350 11 263 1.2E-53 T 25-04-2016 SMD_RS17415 cc22a0c7941940568abc64954dd958d6 400 PIRSF PIRSF029171 20 386 7.9E-78 T 25-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 SMD_RS17415 cc22a0c7941940568abc64954dd958d6 400 SUPERFAMILY SSF53474 70 218 8.75E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS17415 cc22a0c7941940568abc64954dd958d6 400 SUPERFAMILY SSF53474 317 378 8.75E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS17415 cc22a0c7941940568abc64954dd958d6 400 Gene3D G3DSA:3.40.50.1820 302 376 1.2E-17 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS17415 cc22a0c7941940568abc64954dd958d6 400 Gene3D G3DSA:3.40.50.1820 73 242 1.2E-17 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS17415 cc22a0c7941940568abc64954dd958d6 400 Pfam PF03583 Secretory lipase 120 306 4.4E-9 T 25-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 SMD_RS07420 de37e17b80da60aaca987b8f4bcbdcc5 419 Pfam PF13387 Domain of unknown function (DUF4105) 54 185 8.1E-16 T 25-04-2016 IPR025178 Domain of unknown function DUF4105 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 TIGRFAM TIGR04510 mod_pep_cyc: putative peptide modification system cyclase 11 821 0.0 T 25-04-2016 IPR030966 Putative peptide modification system cyclase SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 SMART SM00028 407 440 1.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 SMART SM00028 545 578 170.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 SMART SM00028 441 474 66.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 Gene3D G3DSA:1.25.40.10 506 573 6.4E-13 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 Gene3D G3DSA:1.25.40.10 411 470 6.4E-13 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 SUPERFAMILY SSF55073 5 195 1.73E-20 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 SUPERFAMILY SSF48452 409 571 2.49E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS01215 875e5732e82f27cbea592df137d8ef00 829 Gene3D G3DSA:3.30.70.1230 14 194 4.0E-8 T 25-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMD_RS09460 853c30279ec783ca365c55dcef15e4d7 435 SUPERFAMILY SSF52266 192 402 2.44E-48 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS09460 853c30279ec783ca365c55dcef15e4d7 435 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 197 393 3.2E-25 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS09460 853c30279ec783ca365c55dcef15e4d7 435 PANTHER PTHR30383:SF3 50 403 2.7E-96 T 25-04-2016 SMD_RS09460 853c30279ec783ca365c55dcef15e4d7 435 Gene3D G3DSA:3.40.50.1110 194 402 1.8E-31 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS09460 853c30279ec783ca365c55dcef15e4d7 435 PANTHER PTHR30383 50 403 2.7E-96 T 25-04-2016 SMD_RS21405 dad670cefca5227576f792903781cfdf 148 SUPERFAMILY SSF52402 2 148 5.69E-35 T 25-04-2016 SMD_RS21405 dad670cefca5227576f792903781cfdf 148 PANTHER PTHR31964 1 148 1.1E-36 T 25-04-2016 SMD_RS21405 dad670cefca5227576f792903781cfdf 148 Gene3D G3DSA:3.40.50.620 1 148 1.9E-35 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS21405 dad670cefca5227576f792903781cfdf 148 PANTHER PTHR31964:SF45 1 148 1.1E-36 T 25-04-2016 SMD_RS21405 dad670cefca5227576f792903781cfdf 148 Pfam PF00582 Universal stress protein family 1 148 3.3E-33 T 25-04-2016 IPR006016 UspA GO:0006950 SMD_RS21405 dad670cefca5227576f792903781cfdf 148 PRINTS PR01438 Universal stress protein signature 108 120 5.7E-18 T 25-04-2016 IPR006015 Universal stress protein A SMD_RS21405 dad670cefca5227576f792903781cfdf 148 PRINTS PR01438 Universal stress protein signature 126 148 5.7E-18 T 25-04-2016 IPR006015 Universal stress protein A SMD_RS21405 dad670cefca5227576f792903781cfdf 148 PRINTS PR01438 Universal stress protein signature 2 20 5.7E-18 T 25-04-2016 IPR006015 Universal stress protein A SMD_RS11855 2623175602c32f1434baf12638a175b2 383 Gene3D G3DSA:3.40.710.10 44 351 4.7E-77 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS11855 2623175602c32f1434baf12638a175b2 383 SUPERFAMILY SSF56601 42 347 1.14E-75 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS11855 2623175602c32f1434baf12638a175b2 383 PANTHER PTHR22935 41 357 4.3E-66 T 25-04-2016 SMD_RS11855 2623175602c32f1434baf12638a175b2 383 Pfam PF00144 Beta-lactamase 44 347 3.0E-61 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS21125 13b3548b671da5814593af6ccdc27539 294 Gene3D G3DSA:3.90.25.10 188 293 3.3E-4 T 25-04-2016 SMD_RS21125 13b3548b671da5814593af6ccdc27539 294 PANTHER PTHR10366:SF430 13 294 4.4E-54 T 25-04-2016 SMD_RS21125 13b3548b671da5814593af6ccdc27539 294 Gene3D G3DSA:3.40.50.720 111 187 2.1E-6 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21125 13b3548b671da5814593af6ccdc27539 294 Gene3D G3DSA:3.40.50.720 13 110 6.6E-8 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21125 13b3548b671da5814593af6ccdc27539 294 SUPERFAMILY SSF51735 13 293 1.74E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21125 13b3548b671da5814593af6ccdc27539 294 PANTHER PTHR10366 13 294 4.4E-54 T 25-04-2016 SMD_RS01250 7e40f67e508a5b723bb2cf2f4e2ef1f1 172 SUPERFAMILY SSF46626 65 169 8.13E-17 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS01250 7e40f67e508a5b723bb2cf2f4e2ef1f1 172 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 90 167 3.5E-11 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS01250 7e40f67e508a5b723bb2cf2f4e2ef1f1 172 Gene3D G3DSA:1.10.760.10 89 169 3.3E-23 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS01250 7e40f67e508a5b723bb2cf2f4e2ef1f1 172 PANTHER PTHR40942 17 172 3.8E-72 T 25-04-2016 SMD_RS01250 7e40f67e508a5b723bb2cf2f4e2ef1f1 172 PANTHER PTHR40942:SF1 17 172 3.8E-72 T 25-04-2016 SMD_RS05850 ecd9e69eca025ba9304bc48145cb724b 287 SUPERFAMILY SSF51658 32 277 1.18E-36 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05850 ecd9e69eca025ba9304bc48145cb724b 287 Gene3D G3DSA:3.20.20.150 29 277 2.7E-47 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05850 ecd9e69eca025ba9304bc48145cb724b 287 Pfam PF01261 Xylose isomerase-like TIM barrel 49 234 2.8E-12 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05850 ecd9e69eca025ba9304bc48145cb724b 287 PANTHER PTHR40117 1 282 5.5E-35 T 25-04-2016 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 PANTHER PTHR30002 5 356 1.0E-176 T 25-04-2016 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 10 319 49.386 T 25-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 SUPERFAMILY SSF54862 174 324 1.09E-20 T 25-04-2016 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 Gene3D G3DSA:3.30.70.20 194 269 1.7E-7 T 25-04-2016 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 Pfam PF13484 4Fe-4S double cluster binding domain 196 260 1.0E-21 T 25-04-2016 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 PANTHER PTHR30002:SF4 5 356 1.0E-176 T 25-04-2016 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 Pfam PF08331 Domain of unknown function (DUF1730) 65 144 4.5E-24 T 25-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS15100 c8645e46969a00ad188929a2e8343dff 356 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 353 2.5E-150 T 25-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 Pfam PF00909 Ammonium Transporter Family 78 474 5.4E-122 T 25-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 ProSitePatterns PS01219 Ammonium transporters signature. 232 257 - T 25-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 PANTHER PTHR11730 48 475 6.4E-186 T 25-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 TIGRFAM TIGR00836 amt: ammonium transporter 76 474 8.5E-137 T 25-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 Gene3D G3DSA:1.10.3430.10 71 455 7.0E-138 T 25-04-2016 IPR029020 Ammonium/urea transporter SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 SUPERFAMILY SSF111352 72 455 1.44E-126 T 25-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 PRINTS PR00342 Rhesus blood group protein signature 176 192 1.4E-8 T 25-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 PRINTS PR00342 Rhesus blood group protein signature 357 375 1.4E-8 T 25-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 PRINTS PR00342 Rhesus blood group protein signature 302 324 1.4E-8 T 25-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 PRINTS PR00342 Rhesus blood group protein signature 271 289 1.4E-8 T 25-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMD_RS00670 7a7f9d0b12e9f326f57492d12a38ea39 476 PANTHER PTHR11730:SF17 48 475 6.4E-186 T 25-04-2016 SMD_RS14525 f23631606a9717301ff7c8c8341800e7 180 PANTHER PTHR13256 5 180 1.0E-22 T 25-04-2016 SMD_RS14525 f23631606a9717301ff7c8c8341800e7 180 SUPERFAMILY SSF55729 6 151 5.54E-33 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14525 f23631606a9717301ff7c8c8341800e7 180 Gene3D G3DSA:3.40.630.30 5 177 3.7E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14525 f23631606a9717301ff7c8c8341800e7 180 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 1.4E-27 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 PANTHER PTHR18919 30 325 1.9E-133 T 25-04-2016 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 Gene3D G3DSA:3.40.47.10 165 324 2.1E-53 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 325 73.323 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 Gene3D G3DSA:3.40.47.10 6 164 8.9E-73 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 PANTHER PTHR18919:SF109 30 325 1.9E-133 T 25-04-2016 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 SUPERFAMILY SSF53901 7 325 2.88E-75 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 2.6E-36 T 25-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 5.0E-35 T 25-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMD_RS05150 d38b3f054f1f7984fea6a1ea17983f46 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 7.1E-141 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMD_RS01500 85b9a578b1d390f08379186058f42a9c 804 Pfam PF01471 Putative peptidoglycan binding domain 262 323 9.2E-18 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01500 85b9a578b1d390f08379186058f42a9c 804 Pfam PF01471 Putative peptidoglycan binding domain 588 648 4.9E-15 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01500 85b9a578b1d390f08379186058f42a9c 804 Gene3D G3DSA:1.10.101.10 579 649 2.8E-18 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01500 85b9a578b1d390f08379186058f42a9c 804 Gene3D G3DSA:1.10.101.10 253 329 3.9E-20 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01500 85b9a578b1d390f08379186058f42a9c 804 SUPERFAMILY SSF47090 578 649 1.71E-16 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS01500 85b9a578b1d390f08379186058f42a9c 804 SUPERFAMILY SSF47090 253 329 2.28E-18 T 25-04-2016 IPR002477 Peptidoglycan binding-like SMD_RS13795 4626f9660e9d5b0077109f320e911663 346 SUPERFAMILY SSF54427 94 240 1.36E-30 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS13795 4626f9660e9d5b0077109f320e911663 346 Pfam PF04335 VirB8 protein 20 240 2.6E-55 T 25-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 Pfam PF13632 Glycosyl transferase family group 2 238 432 1.3E-12 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 PANTHER PTHR10587:SF63 40 313 1.3E-119 T 25-04-2016 SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 PANTHER PTHR10587:SF63 363 632 1.3E-119 T 25-04-2016 SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 PANTHER PTHR10587 40 313 1.3E-119 T 25-04-2016 SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 PANTHER PTHR10587 363 632 1.3E-119 T 25-04-2016 SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 641 45.779 T 25-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 SMD_RS19255 f47ecf6a20f6ef1b1399516a971cea7d 641 SUPERFAMILY SSF53448 138 432 4.59E-23 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 Gene3D G3DSA:3.20.20.360 80 421 3.7E-118 T 25-04-2016 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 PIRSF PIRSF001363 12 540 1.2E-225 T 25-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 Gene3D G3DSA:1.20.1220.12 422 533 1.9E-25 T 25-04-2016 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 32 539 2.1E-211 T 25-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 PANTHER PTHR21631:SF1 5 539 2.0E-254 T 25-04-2016 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 PANTHER PTHR21631 5 539 2.0E-254 T 25-04-2016 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 Pfam PF01274 Malate synthase 28 539 3.3E-187 T 25-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SMD_RS01200 a52ae99c1383558d352ff6f77d58fc82 540 SUPERFAMILY SSF51645 31 538 1.22E-179 T 25-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 PANTHER PTHR30050 1 233 4.9E-75 T 25-04-2016 SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 Gene3D G3DSA:1.10.8.60 165 229 4.7E-22 T 25-04-2016 SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 Pfam PF00308 Bacterial dnaA protein 97 200 2.3E-5 T 25-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 PANTHER PTHR30050:SF5 1 233 4.9E-75 T 25-04-2016 SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 Gene3D G3DSA:3.40.50.300 4 161 6.4E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 1.7E-65 T 25-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 SMD_RS05535 5a0cd69f952873f435456fb814a3e450 235 SUPERFAMILY SSF52540 13 207 2.14E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 Gene3D G3DSA:3.20.20.70 4 255 6.8E-79 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 PANTHER PTHR21235:SF2 1 258 1.3E-101 T 25-04-2016 SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 43.282 T 25-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 Pfam PF00977 Histidine biosynthesis protein 5 238 4.2E-71 T 25-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 PANTHER PTHR21235 1 258 1.3E-101 T 25-04-2016 SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 7.6E-99 T 25-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SMD_RS10290 6335d6b648a3e00c769e8d323d68d6c4 258 SUPERFAMILY SSF51366 1 255 7.61E-68 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMD_RS17955 a9361da6a081571278362a82266dca79 759 Pfam PF07793 Protein of unknown function (DUF1631) 20 746 1.4E-181 T 25-04-2016 IPR012434 Protein of unknown function DUF1631 SMD_RS04770 70c4c3e91e7dcda912140981351252f4 660 Pfam PF11843 Protein of unknown function (DUF3363) 286 655 6.3E-143 T 25-04-2016 IPR021795 Protein of unknown function DUF3363 SMD_RS00960 66c42545866e054236b2ec85cbfe7628 191 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 7 191 2.7E-99 T 25-04-2016 IPR026364 Ax21 family SMD_RS00960 66c42545866e054236b2ec85cbfe7628 191 Gene3D G3DSA:2.40.160.10 29 126 1.7E-10 T 25-04-2016 IPR023614 Porin domain SMD_RS00960 66c42545866e054236b2ec85cbfe7628 191 SUPERFAMILY SSF56935 21 126 4.19E-10 T 25-04-2016 SMD_RS00960 66c42545866e054236b2ec85cbfe7628 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 178 1.6E-8 T 25-04-2016 IPR027385 Outer membrane protein beta-barrel SMD_RS19200 b431477aede39fd7ff76ba45f513fe03 211 Pfam PF03922 OmpW family 60 211 4.9E-38 T 25-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 SMD_RS19200 b431477aede39fd7ff76ba45f513fe03 211 PANTHER PTHR36920:SF1 2 211 9.7E-64 T 25-04-2016 SMD_RS19200 b431477aede39fd7ff76ba45f513fe03 211 PANTHER PTHR36920 2 211 9.7E-64 T 25-04-2016 SMD_RS19200 b431477aede39fd7ff76ba45f513fe03 211 SUPERFAMILY SSF56925 59 211 5.76E-20 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS19200 b431477aede39fd7ff76ba45f513fe03 211 Gene3D G3DSA:2.40.160.20 37 211 5.2E-40 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS07325 6cb9557fd7c31712af796ba0bbeeb365 428 PANTHER PTHR38442 2 428 5.6E-143 T 25-04-2016 SMD_RS07325 6cb9557fd7c31712af796ba0bbeeb365 428 Gene3D G3DSA:1.10.357.10 238 345 2.8E-4 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS07325 6cb9557fd7c31712af796ba0bbeeb365 428 Pfam PF04286 Protein of unknown function (DUF445) 49 424 1.4E-105 T 25-04-2016 IPR007383 Protein of unknown function DUF445 SMD_RS21515 49994000fff74850c3d7c6b7901b7904 244 Pfam PF05076 Suppressor of fused protein (SUFU) 60 233 1.1E-44 T 25-04-2016 IPR020941 Suppressor of fused-like domain SMD_RS21515 49994000fff74850c3d7c6b7901b7904 244 SUPERFAMILY SSF103359 68 225 2.09E-5 T 25-04-2016 SMD_RS10395 8bf44434ccb95aed382ff183f9beaad0 475 PANTHER PTHR11785:SF342 16 138 2.0E-153 T 25-04-2016 SMD_RS10395 8bf44434ccb95aed382ff183f9beaad0 475 PANTHER PTHR11785:SF342 156 473 2.0E-153 T 25-04-2016 SMD_RS10395 8bf44434ccb95aed382ff183f9beaad0 475 Pfam PF13520 Amino acid permease 27 440 6.1E-62 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS10395 8bf44434ccb95aed382ff183f9beaad0 475 PANTHER PTHR11785 16 138 2.0E-153 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS10395 8bf44434ccb95aed382ff183f9beaad0 475 PANTHER PTHR11785 156 473 2.0E-153 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS10395 8bf44434ccb95aed382ff183f9beaad0 475 PIRSF PIRSF006060 10 473 2.8E-96 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS21390 8e067ce841215f1a4e2114197aa1dddd 159 Pfam PF04239 Protein of unknown function (DUF421) 95 157 3.9E-12 T 25-04-2016 IPR007353 Protein of unknown function DUF421 SMD_RS21390 8e067ce841215f1a4e2114197aa1dddd 159 Gene3D G3DSA:3.30.240.20 86 157 8.9E-19 T 25-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain SMD_RS21390 8e067ce841215f1a4e2114197aa1dddd 159 PANTHER PTHR34582 1 158 3.2E-32 T 25-04-2016 SMD_RS19425 369aa7891babdce2461e7e04f0f36d71 189 Pfam PF02698 DUF218 domain 38 150 2.9E-13 T 25-04-2016 IPR003848 Domain of unknown function DUF218 SMD_RS19425 369aa7891babdce2461e7e04f0f36d71 189 PANTHER PTHR30336 1 185 3.4E-16 T 25-04-2016 SMD_RS19425 369aa7891babdce2461e7e04f0f36d71 189 Gene3D G3DSA:3.40.50.620 32 147 4.6E-14 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS10925 39f3434d76242bceff781462ece30d79 399 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 230 362 5.5E-20 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMD_RS10925 39f3434d76242bceff781462ece30d79 399 PANTHER PTHR33308:SF3 224 363 1.4E-28 T 25-04-2016 SMD_RS10925 39f3434d76242bceff781462ece30d79 399 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 201 363 2.6E-59 T 25-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SMD_RS10925 39f3434d76242bceff781462ece30d79 399 PANTHER PTHR33308 224 363 1.4E-28 T 25-04-2016 SMD_RS10925 39f3434d76242bceff781462ece30d79 399 Pfam PF10135 Rod binding protein 37 83 7.0E-14 T 25-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal SMD_RS10925 39f3434d76242bceff781462ece30d79 399 SMART SM00047 213 368 1.6E-33 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMD_RS10925 39f3434d76242bceff781462ece30d79 399 PRINTS PR01002 Flagellar protein FlgJ signature 15 38 1.8E-12 T 25-04-2016 SMD_RS10925 39f3434d76242bceff781462ece30d79 399 PRINTS PR01002 Flagellar protein FlgJ signature 60 82 1.8E-12 T 25-04-2016 SMD_RS07835 125a42b4a04b156ebdbe7cfa910c5c13 140 Gene3D G3DSA:3.40.30.10 1 140 6.6E-60 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07835 125a42b4a04b156ebdbe7cfa910c5c13 140 Pfam PF03960 ArsC family 7 115 1.5E-18 T 25-04-2016 IPR006660 Arsenate reductase-like SMD_RS07835 125a42b4a04b156ebdbe7cfa910c5c13 140 SUPERFAMILY SSF52833 3 138 8.81E-40 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07835 125a42b4a04b156ebdbe7cfa910c5c13 140 PANTHER PTHR30041 1 136 1.5E-49 T 25-04-2016 SMD_RS07835 125a42b4a04b156ebdbe7cfa910c5c13 140 PANTHER PTHR30041:SF0 1 136 1.5E-49 T 25-04-2016 SMD_RS07835 125a42b4a04b156ebdbe7cfa910c5c13 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 9.8E-41 T 25-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SMD_RS03030 9794bba6811e13a14016461358e80af5 308 Pfam PF02470 MlaD protein 39 115 6.7E-14 T 25-04-2016 IPR003399 Mce/MlaD SMD_RS03030 9794bba6811e13a14016461358e80af5 308 PANTHER PTHR36698 2 307 3.0E-113 T 25-04-2016 SMD_RS03030 9794bba6811e13a14016461358e80af5 308 PANTHER PTHR36698:SF2 2 307 3.0E-113 T 25-04-2016 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.2E-14 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 SUPERFAMILY SSF48498 92 199 5.56E-7 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 PANTHER PTHR30055:SF51 7 175 5.9E-49 T 25-04-2016 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 PANTHER PTHR30055 7 175 5.9E-49 T 25-04-2016 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 Gene3D G3DSA:1.10.357.10 4 197 1.3E-37 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.2E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.2E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS19305 e18c29cbfb13c2f836210e981b70b382 209 SUPERFAMILY SSF46689 8 83 2.36E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 36.174 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 Pfam PF00557 Metallopeptidase family M24 11 238 1.2E-49 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 Gene3D G3DSA:3.90.230.10 1 253 3.1E-87 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 SUPERFAMILY SSF55920 1 251 3.14E-82 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.5E-18 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.5E-18 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 2.5E-18 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.5E-18 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.2E-84 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 PANTHER PTHR10804:SF82 1 251 4.7E-97 T 25-04-2016 SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMD_RS06550 a28eb9bd8a796ba7809d2448aca42953 260 PANTHER PTHR10804 1 251 4.7E-97 T 25-04-2016 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 502 4.3E-239 T 25-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 Gene3D G3DSA:3.40.810.20 232 497 1.4E-73 T 25-04-2016 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 14 221 2.6E-32 T 25-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 327 469 1.6E-42 T 25-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 SUPERFAMILY SSF100950 4 228 2.2E-73 T 25-04-2016 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 SUPERFAMILY SSF100950 231 503 5.76E-82 T 25-04-2016 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 PANTHER PTHR21432 4 503 2.0E-276 T 25-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 PANTHER PTHR21432:SF10 4 503 2.0E-276 T 25-04-2016 SMD_RS02225 118625c41e26cb441ee30f5fb61a15e1 504 Gene3D G3DSA:3.40.1080.10 11 227 3.3E-48 T 25-04-2016 SMD_RS17540 cf127ffb0f5fa3c77927acc5c06d3b8b 66 PANTHER PTHR34472:SF1 1 66 8.1E-26 T 25-04-2016 SMD_RS17540 cf127ffb0f5fa3c77927acc5c06d3b8b 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.9E-22 T 25-04-2016 IPR010035 ThiS, thiamine-biosynthesis SMD_RS17540 cf127ffb0f5fa3c77927acc5c06d3b8b 66 SUPERFAMILY SSF54285 2 65 1.89E-18 T 25-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SMD_RS17540 cf127ffb0f5fa3c77927acc5c06d3b8b 66 Gene3D G3DSA:3.10.20.30 1 66 2.6E-27 T 25-04-2016 IPR012675 Beta-grasp domain SMD_RS17540 cf127ffb0f5fa3c77927acc5c06d3b8b 66 Pfam PF02597 ThiS family 3 66 9.3E-15 T 25-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SMD_RS17540 cf127ffb0f5fa3c77927acc5c06d3b8b 66 PANTHER PTHR34472 1 66 8.1E-26 T 25-04-2016 SMD_RS04430 fb27540c5009405719570fe90b81a143 214 SUPERFAMILY SSF53254 1 203 1.31E-53 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS04430 fb27540c5009405719570fe90b81a143 214 PANTHER PTHR23029:SF50 2 172 7.9E-50 T 25-04-2016 SMD_RS04430 fb27540c5009405719570fe90b81a143 214 PANTHER PTHR23029 2 172 7.9E-50 T 25-04-2016 SMD_RS04430 fb27540c5009405719570fe90b81a143 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 25-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SMD_RS04430 fb27540c5009405719570fe90b81a143 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 1.7E-56 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS04430 fb27540c5009405719570fe90b81a143 214 Gene3D G3DSA:3.40.50.1240 1 203 1.5E-57 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMD_RS04430 fb27540c5009405719570fe90b81a143 214 SMART SM00855 2 158 5.4E-24 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMD_RS13335 d2e3d0a5eabbbadff0d500058199e79d 552 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 545 7.7E-224 T 25-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SMD_RS13335 d2e3d0a5eabbbadff0d500058199e79d 552 PANTHER PTHR30003 2 552 0.0 T 25-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SMD_RS13335 d2e3d0a5eabbbadff0d500058199e79d 552 PANTHER PTHR30003:SF0 2 552 0.0 T 25-04-2016 SMD_RS13335 d2e3d0a5eabbbadff0d500058199e79d 552 Pfam PF02652 L-lactate permease 16 541 1.6E-214 T 25-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SMD_RS02395 0db7a0bc08a4db773b1f0dbd674ceea4 322 SUPERFAMILY SSF88713 218 273 6.67E-29 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS02395 0db7a0bc08a4db773b1f0dbd674ceea4 322 SUPERFAMILY SSF88713 23 181 6.67E-29 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMD_RS02395 0db7a0bc08a4db773b1f0dbd674ceea4 322 Pfam PF01522 Polysaccharide deacetylase 23 152 3.5E-12 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS02395 0db7a0bc08a4db773b1f0dbd674ceea4 322 Gene3D G3DSA:3.20.20.370 23 181 3.4E-23 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS02395 0db7a0bc08a4db773b1f0dbd674ceea4 322 Gene3D G3DSA:3.20.20.370 219 272 3.4E-23 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 Gene3D G3DSA:4.10.520.10 1 90 3.0E-39 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 SUPERFAMILY SSF47729 1 90 1.62E-33 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 SMART SM00411 1 90 1.1E-44 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.4E-19 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.4E-19 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.4E-19 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.2E-35 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 25-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SMD_RS04610 3346e56c125015143114d6b454d1aa76 90 PANTHER PTHR33175 1 90 9.0E-48 T 25-04-2016 SMD_RS20335 34bd8fe841473d77b409a1d996cbeb9a 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 6.4E-18 T 25-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SMD_RS20335 34bd8fe841473d77b409a1d996cbeb9a 94 PANTHER PTHR34702:SF1 1 94 4.3E-20 T 25-04-2016 SMD_RS20335 34bd8fe841473d77b409a1d996cbeb9a 94 PANTHER PTHR34702 1 94 4.3E-20 T 25-04-2016 SMD_RS20335 34bd8fe841473d77b409a1d996cbeb9a 94 PIRSF PIRSF028784 4 94 7.4E-26 T 25-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 SUPERFAMILY SSF53850 37 309 8.4E-45 T 25-04-2016 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 PANTHER PTHR30006 1 346 4.4E-86 T 25-04-2016 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 Pfam PF13531 Bacterial extracellular solute-binding protein 46 295 8.0E-20 T 25-04-2016 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 Gene3D G3DSA:3.40.190.10 134 274 3.2E-53 T 25-04-2016 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 Gene3D G3DSA:3.40.190.10 1 133 8.1E-54 T 25-04-2016 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 Gene3D G3DSA:3.40.190.10 275 343 8.1E-54 T 25-04-2016 SMD_RS18385 2422517788a002efa305985e244cbdd6 351 PANTHER PTHR30006:SF10 1 346 4.4E-86 T 25-04-2016 SMD_RS02715 dffd7a2bea715cb5091a72c7a46acbf3 171 Gene3D G3DSA:3.10.129.10 6 167 1.1E-55 T 25-04-2016 IPR029069 HotDog domain SMD_RS02715 dffd7a2bea715cb5091a72c7a46acbf3 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 5 170 1.4E-90 T 25-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS02715 dffd7a2bea715cb5091a72c7a46acbf3 171 Pfam PF07977 FabA-like domain 28 157 3.0E-50 T 25-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMD_RS02715 dffd7a2bea715cb5091a72c7a46acbf3 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 49.467 T 25-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMD_RS02715 dffd7a2bea715cb5091a72c7a46acbf3 171 SUPERFAMILY SSF54637 5 168 1.15E-55 T 25-04-2016 IPR029069 HotDog domain SMD_RS01390 d8081923666ddd33b95681a31de32f38 116 Pfam PF05521 Phage head-tail joining protein 7 107 7.2E-13 T 25-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 PANTHER PTHR30069 921 983 2.0E-283 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 PANTHER PTHR30069 5 896 2.0E-283 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Gene3D G3DSA:2.170.130.10 31 173 8.6E-35 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 PANTHER PTHR30069:SF7 921 983 2.0E-283 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 PANTHER PTHR30069:SF7 5 896 2.0E-283 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Gene3D G3DSA:2.40.170.20 491 861 2.2E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Gene3D G3DSA:2.40.170.20 320 452 2.2E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Gene3D G3DSA:2.40.170.20 907 985 2.2E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Gene3D G3DSA:2.40.170.20 174 242 2.2E-67 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 170 3.6E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 SUPERFAMILY SSF56935 321 629 1.43E-89 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 SUPERFAMILY SSF56935 674 718 1.43E-89 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 SUPERFAMILY SSF56935 766 863 1.43E-89 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 SUPERFAMILY SSF56935 917 977 1.43E-89 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 SUPERFAMILY SSF56935 30 230 1.43E-89 T 25-04-2016 SMD_RS10325 c0bc0932427fdc0a196ee1d5688d9149 985 Pfam PF00593 TonB dependent receptor 600 978 6.2E-28 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 Pfam PF00588 SpoU rRNA Methylase family 100 239 8.0E-41 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.484 T 25-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 SUPERFAMILY SSF75217 71 247 3.79E-48 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 SUPERFAMILY SSF55315 2 76 6.83E-15 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 6.5E-14 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 Gene3D G3DSA:3.30.1330.30 2 77 2.0E-17 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 Gene3D G3DSA:3.40.1280.10 96 246 4.2E-55 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 PANTHER PTHR12029 7 247 6.6E-75 T 25-04-2016 SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 SMART SM00967 7 83 3.5E-12 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMD_RS07175 ea44fb71017d63103b0aea8c42115bff 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 2.2E-73 T 25-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 SUPERFAMILY SSF46955 1 110 3.3E-24 T 25-04-2016 IPR009061 Putative DNA-binding domain SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 SMART SM00422 1 69 7.2E-19 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.8E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.8E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 3.8E-7 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 Gene3D G3DSA:1.10.1660.10 1 111 1.3E-28 T 25-04-2016 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 PANTHER PTHR30204 1 114 1.2E-18 T 25-04-2016 SMD_RS10510 0a95e8230ffc5a89c5291e3a7fcab27f 131 Pfam PF13411 MerR HTH family regulatory protein 1 65 8.7E-16 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMD_RS06875 56cecc8ce6a4bb6a4532c3c1f1f00478 602 Pfam PF05960 Bacterial protein of unknown function (DUF885) 60 595 2.9E-108 T 25-04-2016 IPR010281 Protein of unknown function DUF885 SMD_RS06875 56cecc8ce6a4bb6a4532c3c1f1f00478 602 PANTHER PTHR33361:SF5 1 596 1.1E-255 T 25-04-2016 SMD_RS06875 56cecc8ce6a4bb6a4532c3c1f1f00478 602 PANTHER PTHR33361 1 596 1.1E-255 T 25-04-2016 SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 Gene3D G3DSA:3.60.15.10 56 354 2.5E-99 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 PANTHER PTHR15032:SF4 74 356 3.8E-109 T 25-04-2016 SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 SUPERFAMILY SSF56281 195 343 2.3E-36 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 SUPERFAMILY SSF56281 94 168 2.3E-36 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 PANTHER PTHR15032 74 356 3.8E-109 T 25-04-2016 SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 Pfam PF12706 Beta-lactamase superfamily domain 111 303 4.9E-45 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS10040 c1fe9cae7426b234a46759aa3a5afb3a 358 PIRSF PIRSF038896 15 353 3.6E-89 T 25-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 Gene3D G3DSA:2.170.130.10 13 149 2.9E-40 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 PANTHER PTHR32552 1 718 5.2E-189 T 25-04-2016 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 146 3.3E-24 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 SUPERFAMILY SSF56935 14 718 7.33E-124 T 25-04-2016 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 Pfam PF00593 TonB dependent receptor 458 716 4.3E-38 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 23 718 4.0E-118 T 25-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 23 718 4.6E-137 T 25-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 Gene3D G3DSA:2.40.170.20 150 717 2.2E-107 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS03645 6b0ea92eae685a3e7c3fa73aa8f9d9ad 718 PANTHER PTHR32552:SF18 1 718 5.2E-189 T 25-04-2016 SMD_RS03960 646992be7ee9610e2b1d26c5fb6f78e7 111 Pfam PF09842 Predicted membrane protein (DUF2069) 8 100 2.0E-9 T 25-04-2016 IPR018643 Protein of unknown function DUF2069, membrane SMD_RS09440 e33dad83fd6bf24fe9a06286a553227d 141 PANTHER PTHR12901 1 140 1.1E-52 T 25-04-2016 SMD_RS09440 e33dad83fd6bf24fe9a06286a553227d 141 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 8.4E-29 T 25-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain SMD_RS09440 e33dad83fd6bf24fe9a06286a553227d 141 SUPERFAMILY SSF55961 1 140 3.17E-34 T 25-04-2016 SMD_RS09440 e33dad83fd6bf24fe9a06286a553227d 141 Gene3D G3DSA:3.30.530.20 1 139 2.6E-36 T 25-04-2016 IPR023393 START-like domain SMD_RS09440 e33dad83fd6bf24fe9a06286a553227d 141 PANTHER PTHR12901:SF7 1 140 1.1E-52 T 25-04-2016 SMD_RS03745 a66ec712472fe1fa23f594a0505cc183 127 PANTHER PTHR14289 3 124 8.4E-48 T 25-04-2016 SMD_RS03745 a66ec712472fe1fa23f594a0505cc183 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 32.123 T 25-04-2016 IPR023065 Uncharacterised protein family ApaG SMD_RS03745 a66ec712472fe1fa23f594a0505cc183 127 SUPERFAMILY SSF110069 8 127 6.67E-47 T 25-04-2016 IPR007474 ApaG domain SMD_RS03745 a66ec712472fe1fa23f594a0505cc183 127 Gene3D G3DSA:2.60.40.1470 8 127 3.0E-44 T 25-04-2016 IPR007474 ApaG domain SMD_RS03745 a66ec712472fe1fa23f594a0505cc183 127 Pfam PF04379 Protein of unknown function (DUF525) 20 104 7.1E-34 T 25-04-2016 IPR007474 ApaG domain SMD_RS15170 4bac70c8e0c8f80a4db95e6efb97ccd5 158 SUPERFAMILY SSF117070 10 130 4.32E-7 T 25-04-2016 SMD_RS15170 4bac70c8e0c8f80a4db95e6efb97ccd5 158 Pfam PF03168 Late embryogenesis abundant protein 50 142 8.9E-7 T 25-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 SMD_RS11260 f40881a30c8a6316d2eeb35e352e64a4 309 Pfam PF00589 Phage integrase family 135 296 2.3E-10 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS11260 f40881a30c8a6316d2eeb35e352e64a4 309 Gene3D G3DSA:1.10.150.130 7 98 5.7E-24 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMD_RS11260 f40881a30c8a6316d2eeb35e352e64a4 309 Gene3D G3DSA:1.10.443.10 99 299 1.3E-53 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMD_RS11260 f40881a30c8a6316d2eeb35e352e64a4 309 SUPERFAMILY SSF47823 7 95 3.84E-23 T 25-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SMD_RS11260 f40881a30c8a6316d2eeb35e352e64a4 309 SUPERFAMILY SSF56349 99 306 5.3E-37 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMD_RS08655 9354c2baa82effd8f9de807d08f012f1 144 SUPERFAMILY SSF54975 3 109 7.85E-31 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS08655 9354c2baa82effd8f9de807d08f012f1 144 SMART SM01034 3 95 9.4E-31 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS08655 9354c2baa82effd8f9de807d08f012f1 144 Pfam PF04940 Sensors of blue-light using FAD 3 94 2.4E-28 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS19605 cfcd9abf552bd34df1f636b6da0d921b 166 PANTHER PTHR34473:SF2 11 164 1.8E-30 T 25-04-2016 SMD_RS19605 cfcd9abf552bd34df1f636b6da0d921b 166 Pfam PF03703 Bacterial PH domain 78 155 3.5E-14 T 25-04-2016 IPR005182 Domain of unknown function DUF304 SMD_RS19605 cfcd9abf552bd34df1f636b6da0d921b 166 PANTHER PTHR34473 11 164 1.8E-30 T 25-04-2016 SMD_RS18750 f1f8b60491a932774008e8cb1a35c26e 130 PANTHER PTHR28008 8 127 2.3E-28 T 25-04-2016 SMD_RS18750 f1f8b60491a932774008e8cb1a35c26e 130 PANTHER PTHR28008:SF2 8 127 2.3E-28 T 25-04-2016 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 Gene3D G3DSA:1.20.1050.40 50 180 4.5E-20 T 25-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 PANTHER PTHR11804 40 717 0.0 T 25-04-2016 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 Pfam PF01432 Peptidase family M3 270 713 4.7E-131 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 SUPERFAMILY SSF55486 43 716 1.34E-178 T 25-04-2016 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 Gene3D G3DSA:1.10.1370.10 543 717 2.3E-112 T 25-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 Gene3D G3DSA:1.10.1370.10 184 390 2.3E-112 T 25-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 PANTHER PTHR11804:SF47 40 717 0.0 T 25-04-2016 SMD_RS01165 6ae52b02aec8cf8fdcc409b1375335e0 718 Gene3D G3DSA:3.40.390.10 400 542 1.2E-51 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.9E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.9E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.9E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 PANTHER PTHR26402 4 203 2.7E-71 T 25-04-2016 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 SUPERFAMILY SSF52172 4 130 8.82E-27 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 Pfam PF00072 Response regulator receiver domain 6 118 4.0E-21 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 SMART SM00421 146 203 2.0E-22 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 SUPERFAMILY SSF46894 131 204 1.09E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 Gene3D G3DSA:1.10.10.10 136 204 5.6E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 PANTHER PTHR26402:SF474 4 203 2.7E-71 T 25-04-2016 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 4.8E-19 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 SMART SM00448 4 118 1.7E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18380 0341b2abf2eafcc2cf7b8158ff6ae49c 216 Gene3D G3DSA:3.40.50.2300 2 125 3.7E-30 T 25-04-2016 SMD_RS05665 53c7ca99021838b157cb7397e8e473f2 491 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 27 482 5.6E-192 T 25-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 SMD_RS05665 53c7ca99021838b157cb7397e8e473f2 491 Pfam PF01458 Uncharacterized protein family (UPF0051) 229 462 4.2E-67 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SMD_RS05665 53c7ca99021838b157cb7397e8e473f2 491 PANTHER PTHR30508:SF1 13 491 0.0 T 25-04-2016 SMD_RS05665 53c7ca99021838b157cb7397e8e473f2 491 SUPERFAMILY SSF101960 47 488 2.09E-137 T 25-04-2016 SMD_RS05665 53c7ca99021838b157cb7397e8e473f2 491 PANTHER PTHR30508 13 491 0.0 T 25-04-2016 SMD_RS00495 c9a47b3cdd6f68a1487d267fb5d477f5 128 PANTHER PTHR34134 4 127 7.4E-43 T 25-04-2016 SMD_RS00495 c9a47b3cdd6f68a1487d267fb5d477f5 128 PANTHER PTHR34134:SF2 4 127 7.4E-43 T 25-04-2016 SMD_RS00495 c9a47b3cdd6f68a1487d267fb5d477f5 128 Gene3D G3DSA:1.10.10.10 4 77 1.7E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00495 c9a47b3cdd6f68a1487d267fb5d477f5 128 SUPERFAMILY SSF46785 4 121 1.27E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS00495 c9a47b3cdd6f68a1487d267fb5d477f5 128 PIRSF PIRSF019455 1 128 4.8E-23 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMD_RS00495 c9a47b3cdd6f68a1487d267fb5d477f5 128 Pfam PF03965 Penicillinase repressor 6 119 5.5E-26 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 PANTHER PTHR26402 3 208 2.1E-46 T 25-04-2016 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 SUPERFAMILY SSF46894 138 211 3.4E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 PANTHER PTHR26402:SF458 3 208 2.1E-46 T 25-04-2016 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.0E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.0E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.0E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 SMART SM00421 149 206 2.3E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 SMART SM00448 3 120 1.9E-15 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 Gene3D G3DSA:1.10.10.10 155 211 1.3E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 Gene3D G3DSA:3.40.50.2300 2 154 1.1E-25 T 25-04-2016 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 SUPERFAMILY SSF52172 2 133 1.34E-23 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 Pfam PF00072 Response regulator receiver domain 5 120 2.5E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS04045 97f12daadc26efc2692fb63cbaf7c6ce 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 6.1E-17 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS16865 e8f92d9c148f04f1c10a628f0dbcbc2c 331 Pfam PF05275 Copper resistance protein B precursor (CopB) 130 331 2.1E-83 T 25-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 SMD_RS16865 e8f92d9c148f04f1c10a628f0dbcbc2c 331 SUPERFAMILY SSF103515 156 327 3.53E-5 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS04875 8f7b99d3d8b0b2a3deea18606f735114 154 SUPERFAMILY SSF47598 4 42 3.06E-6 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SMD_RS04875 8f7b99d3d8b0b2a3deea18606f735114 154 Gene3D G3DSA:1.10.1220.10 6 38 7.0E-6 T 25-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SMD_RS04875 8f7b99d3d8b0b2a3deea18606f735114 154 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 2.3E-4 T 25-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SMD_RS09930 35e107fe8af439b5e64fde59a04e32d8 151 SUPERFAMILY SSF46785 9 147 2.94E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09930 35e107fe8af439b5e64fde59a04e32d8 151 Gene3D G3DSA:1.10.10.10 6 148 2.7E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09930 35e107fe8af439b5e64fde59a04e32d8 151 PANTHER PTHR33164 19 151 1.0E-13 T 25-04-2016 SMD_RS09930 35e107fe8af439b5e64fde59a04e32d8 151 SMART SM00347 31 132 5.0E-7 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS09930 35e107fe8af439b5e64fde59a04e32d8 151 Pfam PF12802 MarR family 37 93 1.7E-8 T 25-04-2016 SMD_RS13705 6d153d5ffebce3aac5c2edb6bc3ed984 145 Gene3D G3DSA:3.40.630.30 2 143 4.8E-28 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS13705 6d153d5ffebce3aac5c2edb6bc3ed984 145 Pfam PF13673 Acetyltransferase (GNAT) domain 47 126 6.7E-17 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS13705 6d153d5ffebce3aac5c2edb6bc3ed984 145 PANTHER PTHR23091:SF277 1 126 9.3E-34 T 25-04-2016 SMD_RS13705 6d153d5ffebce3aac5c2edb6bc3ed984 145 PANTHER PTHR23091 1 126 9.3E-34 T 25-04-2016 SMD_RS13705 6d153d5ffebce3aac5c2edb6bc3ed984 145 SUPERFAMILY SSF55729 2 142 4.97E-28 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS19710 5fa44fe956d7b8abab726144581fb165 454 PANTHER PTHR11206:SF153 7 443 2.3E-174 T 25-04-2016 SMD_RS19710 5fa44fe956d7b8abab726144581fb165 454 PANTHER PTHR11206 7 443 2.3E-174 T 25-04-2016 SMD_RS19710 5fa44fe956d7b8abab726144581fb165 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 423 3.5E-76 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS19710 5fa44fe956d7b8abab726144581fb165 454 Pfam PF01554 MatE 249 408 4.5E-28 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS19710 5fa44fe956d7b8abab726144581fb165 454 Pfam PF01554 MatE 23 182 8.6E-22 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 PANTHER PTHR30203 18 429 2.1E-70 T 25-04-2016 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 Pfam PF02321 Outer membrane efflux protein 243 422 5.9E-21 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 Pfam PF02321 Outer membrane efflux protein 27 216 5.5E-23 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 426 4.3E-91 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 Gene3D G3DSA:1.20.1600.10 18 429 6.5E-92 T 25-04-2016 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 PANTHER PTHR30203:SF3 18 429 2.1E-70 T 25-04-2016 SMD_RS04805 79435c4a525af02b2d7f97f0e84dae43 429 SUPERFAMILY SSF56954 18 428 7.72E-89 T 25-04-2016 SMD_RS08720 b60b0c1ab355b7066d8fa6b414a24ef9 373 PANTHER PTHR11101 1 370 1.6E-92 T 25-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMD_RS08720 b60b0c1ab355b7066d8fa6b414a24ef9 373 Pfam PF01384 Phosphate transporter family 19 359 9.2E-78 T 25-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMD_RS13160 6b3796c6706f031c1c7a4436c761e630 449 Gene3D G3DSA:3.30.450.90 99 196 2.0E-29 T 25-04-2016 SMD_RS13160 6b3796c6706f031c1c7a4436c761e630 449 SUPERFAMILY SSF52540 82 408 2.48E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13160 6b3796c6706f031c1c7a4436c761e630 449 Pfam PF00437 Type II/IV secretion system protein 103 378 8.3E-78 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS13160 6b3796c6706f031c1c7a4436c761e630 449 PANTHER PTHR30258 75 446 6.2E-115 T 25-04-2016 SMD_RS13160 6b3796c6706f031c1c7a4436c761e630 449 Gene3D G3DSA:3.40.50.300 199 411 5.0E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13160 6b3796c6706f031c1c7a4436c761e630 449 PANTHER PTHR30258:SF3 75 446 6.2E-115 T 25-04-2016 SMD_RS07635 e93a6a9d641ee6bc48f0503bf312597a 255 Pfam PF06629 MltA-interacting protein MipA 36 252 1.7E-38 T 25-04-2016 IPR010583 MltA-interacting MipA SMD_RS07635 e93a6a9d641ee6bc48f0503bf312597a 255 PANTHER PTHR38776 9 255 2.2E-30 T 25-04-2016 SMD_RS01735 f1b0ca5f4a179fb317b523d77f10aece 156 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 29 132 4.9E-7 T 25-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 SUPERFAMILY SSF82549 1 306 6.02E-54 T 25-04-2016 SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 305 3.0E-35 T 25-04-2016 IPR003797 DegV SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 PANTHER PTHR33434:SF2 1 313 4.5E-65 T 25-04-2016 SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 306 3.5E-68 T 25-04-2016 IPR003797 DegV SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 PANTHER PTHR33434 1 313 4.5E-65 T 25-04-2016 SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 Gene3D G3DSA:3.30.1180.10 171 307 2.1E-18 T 25-04-2016 SMD_RS18485 b15959cc46af529f69cfb954f51b94ef 313 Gene3D G3DSA:3.40.50.10170 1 167 1.0E-31 T 25-04-2016 SMD_RS10400 4fb80e20c22501f7c9445ca9d1fa33dd 491 PANTHER PTHR11785 174 486 7.0E-169 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS10400 4fb80e20c22501f7c9445ca9d1fa33dd 491 PANTHER PTHR11785 3 144 7.0E-169 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS10400 4fb80e20c22501f7c9445ca9d1fa33dd 491 PANTHER PTHR11785:SF342 174 486 7.0E-169 T 25-04-2016 SMD_RS10400 4fb80e20c22501f7c9445ca9d1fa33dd 491 PANTHER PTHR11785:SF342 3 144 7.0E-169 T 25-04-2016 SMD_RS10400 4fb80e20c22501f7c9445ca9d1fa33dd 491 Pfam PF13520 Amino acid permease 41 461 3.6E-57 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS10400 4fb80e20c22501f7c9445ca9d1fa33dd 491 PIRSF PIRSF006060 22 490 4.0E-92 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMD_RS17185 16de323a167cd127496351975b531eca 172 SUPERFAMILY SSF103088 65 169 2.49E-33 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS17185 16de323a167cd127496351975b531eca 172 PANTHER PTHR30128 1 172 6.0E-74 T 25-04-2016 SMD_RS17185 16de323a167cd127496351975b531eca 172 Gene3D G3DSA:3.30.1330.60 62 170 3.4E-33 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS17185 16de323a167cd127496351975b531eca 172 PANTHER PTHR30128:SF18 1 172 6.0E-74 T 25-04-2016 SMD_RS17185 16de323a167cd127496351975b531eca 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 169 7.7E-42 T 25-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 SMD_RS17185 16de323a167cd127496351975b531eca 172 Pfam PF00691 OmpA family 68 163 4.2E-18 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS17185 16de323a167cd127496351975b531eca 172 PRINTS PR01021 OMPA domain signature 114 130 3.0E-14 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS17185 16de323a167cd127496351975b531eca 172 PRINTS PR01021 OMPA domain signature 69 91 3.0E-14 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS17185 16de323a167cd127496351975b531eca 172 PRINTS PR01021 OMPA domain signature 99 114 3.0E-14 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 SUPERFAMILY SSF52540 13 197 5.07E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 SMART SM00072 13 195 1.1E-55 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 Gene3D G3DSA:3.30.63.10 44 95 8.9E-24 T 25-04-2016 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 Hamap MF_00328 Guanylate kinase [gmk]. 12 195 34.918 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 14 192 7.6E-70 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 ProSitePatterns PS00856 Guanylate kinase-like signature. 48 65 - T 25-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 PANTHER PTHR23117:SF13 13 209 4.7E-85 T 25-04-2016 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 Pfam PF00625 Guanylate kinase 15 192 1.0E-47 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 PANTHER PTHR23117 13 209 4.7E-85 T 25-04-2016 SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 Gene3D G3DSA:3.40.50.300 96 211 1.1E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS17880 76fa4bc3e8a8ab208c9e3bedf6af53b0 221 Gene3D G3DSA:3.40.50.300 8 36 1.1E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16010 e325500a8335065dae8416f6ac177041 854 PANTHER PTHR34697:SF2 7 853 2.4E-298 T 25-04-2016 SMD_RS16010 e325500a8335065dae8416f6ac177041 854 PANTHER PTHR34697 7 853 2.4E-298 T 25-04-2016 SMD_RS16010 e325500a8335065dae8416f6ac177041 854 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 542 829 1.8E-92 T 25-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal SMD_RS16010 e325500a8335065dae8416f6ac177041 854 SUPERFAMILY SSF55729 649 827 3.44E-13 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 PANTHER PTHR30572:SF3 10 320 2.3E-117 T 25-04-2016 SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 PANTHER PTHR30572 10 320 2.3E-117 T 25-04-2016 SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 Gene3D G3DSA:2.40.50.100 66 98 1.9E-17 T 25-04-2016 SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 Gene3D G3DSA:2.40.50.100 187 219 1.9E-17 T 25-04-2016 SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 SUPERFAMILY SSF111369 53 248 4.32E-24 T 25-04-2016 SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 268 2.9E-16 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS07190 9d2ddac72772afa12176778b5ac54a97 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 383 1.2E-51 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 SUPERFAMILY SSF56935 519 556 1.54E-82 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 SUPERFAMILY SSF56935 49 262 1.54E-82 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 SUPERFAMILY SSF56935 738 1024 1.54E-82 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 SUPERFAMILY SSF56935 302 350 1.54E-82 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 SUPERFAMILY SSF56935 417 478 1.54E-82 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 SUPERFAMILY SSF56935 615 676 1.54E-82 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.40.170.20 419 485 3.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.40.170.20 734 1024 3.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.40.170.20 301 336 3.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.40.170.20 521 585 3.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.40.170.20 642 672 3.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.40.170.20 179 258 3.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552 16 250 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552 723 775 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552 563 679 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552 800 1024 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552 299 408 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 48 1024 4.3E-218 T 25-04-2016 IPR010104 Bacterial TonB-dependent receptor SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Pfam PF00593 TonB dependent receptor 741 1023 1.2E-31 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552:SF16 16 250 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552:SF16 723 775 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552:SF16 563 679 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552:SF16 800 1024 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 PANTHER PTHR32552:SF16 299 408 7.6E-262 T 25-04-2016 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 175 3.4E-15 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS10345 b30202418cf6019ac255420cb919ee12 1024 Gene3D G3DSA:2.170.130.10 66 178 1.2E-19 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS11710 7d783ab665e09ca593b345187fdd7ba5 417 PANTHER PTHR37944 33 417 7.8E-139 T 25-04-2016 SMD_RS11710 7d783ab665e09ca593b345187fdd7ba5 417 PANTHER PTHR37944:SF1 33 417 7.8E-139 T 25-04-2016 SMD_RS11710 7d783ab665e09ca593b345187fdd7ba5 417 Pfam PF04966 Carbohydrate-selective porin, OprB family 51 416 1.7E-77 T 25-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 Pfam PF00593 TonB dependent receptor 485 727 2.8E-21 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 PANTHER PTHR32552:SF1 5 729 3.8E-163 T 25-04-2016 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 167 1.8E-11 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 Gene3D G3DSA:2.170.130.10 38 176 7.4E-21 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 PANTHER PTHR32552 5 729 3.8E-163 T 25-04-2016 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 727 3.3E-113 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 SUPERFAMILY SSF56935 68 727 1.86E-100 T 25-04-2016 SMD_RS00990 e112b06ffa3ee4d60f941edbde44bdb9 729 Gene3D G3DSA:2.40.170.20 181 727 8.1E-108 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS19900 739254d098751ed9399eef75d9ec5ba5 275 Gene3D G3DSA:3.20.20.60 8 233 1.2E-56 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS19900 739254d098751ed9399eef75d9ec5ba5 275 PANTHER PTHR21631 1 258 4.2E-67 T 25-04-2016 SMD_RS19900 739254d098751ed9399eef75d9ec5ba5 275 SUPERFAMILY SSF51621 9 264 6.8E-57 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMD_RS19900 739254d098751ed9399eef75d9ec5ba5 275 PANTHER PTHR21631:SF18 1 258 4.2E-67 T 25-04-2016 SMD_RS19900 739254d098751ed9399eef75d9ec5ba5 275 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 252 2.8E-62 T 25-04-2016 SMD_RS11400 adba73fe09bddcd0678723aa4b3668ce 100 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 4 90 0.003 T 25-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 SMD_RS11400 adba73fe09bddcd0678723aa4b3668ce 100 Pfam PF02303 Helix-destabilising protein 1 75 1.4E-7 T 25-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 SMD_RS11400 adba73fe09bddcd0678723aa4b3668ce 100 Gene3D G3DSA:2.40.50.140 2 86 9.4E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS11400 adba73fe09bddcd0678723aa4b3668ce 100 SUPERFAMILY SSF50249 2 87 7.54E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 PANTHER PTHR36251 10 994 0.0 T 25-04-2016 SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 Pfam PF09327 Domain of unknown function (DUF1983) 1007 1088 1.2E-27 T 25-04-2016 IPR015406 Domain of unknown function DUF1983 SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 Gene3D G3DSA:2.60.40.10 650 717 4.4E-5 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 PANTHER PTHR36251:SF2 10 994 0.0 T 25-04-2016 SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 SUPERFAMILY SSF49265 646 724 1.17E-6 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 Gene3D G3DSA:2.10.10.20 866 907 4.5E-4 T 25-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 SMD_RS01470 c0cc46605e358dcbc6f92c39f27b4804 1162 Pfam PF13550 Putative phage tail protein 354 513 7.3E-20 T 25-04-2016 IPR032876 Tip attachment protein J SMD_RS14565 3853fb5928d0918beba3a7b5729bc573 161 PANTHER PTHR39165 1 161 1.1E-42 T 25-04-2016 SMD_RS14565 3853fb5928d0918beba3a7b5729bc573 161 Pfam PF04306 Protein of unknown function (DUF456) 23 158 3.5E-38 T 25-04-2016 IPR007403 Protein of unknown function DUF456 SMD_RS14565 3853fb5928d0918beba3a7b5729bc573 161 PANTHER PTHR39165:SF1 1 161 1.1E-42 T 25-04-2016 SMD_RS16250 f654cf3993c5d17015305633a4fe0346 291 PANTHER PTHR38104 17 234 2.4E-28 T 25-04-2016 SMD_RS16250 f654cf3993c5d17015305633a4fe0346 291 SUPERFAMILY SSF89069 24 91 1.7E-14 T 25-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SMD_RS16250 f654cf3993c5d17015305633a4fe0346 291 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 25 98 6.5E-16 T 25-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 134 152 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 117 134 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 69 84 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 95 114 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 201 219 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 49 64 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 175 193 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 265 277 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PRINTS PR01010 Flagellar P-ring protein signature 34 49 1.4E-79 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 14 378 38.866 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PANTHER PTHR30381 1 378 2.5E-211 T 25-04-2016 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 Pfam PF02119 Flagellar P-ring protein 34 377 4.5E-137 T 25-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMD_RS10930 88f760a4a2a3a05ff36410068169a48e 378 PANTHER PTHR30381:SF1 1 378 2.5E-211 T 25-04-2016 SMD_RS08085 1aa69aaef97423234b04bce5b956a667 229 Pfam PF11679 Protein of unknown function (DUF3275) 14 222 6.1E-96 T 25-04-2016 IPR021693 Protein of unknown function DUF3275 SMD_RS07040 c75ed3b04e813a7d06701180f9c3c2da 789 PANTHER PTHR30451 36 758 3.6E-200 T 25-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SMD_RS07040 c75ed3b04e813a7d06701180f9c3c2da 789 PANTHER PTHR30451:SF5 36 758 3.6E-200 T 25-04-2016 SMD_RS07040 c75ed3b04e813a7d06701180f9c3c2da 789 Pfam PF13953 PapC C-terminal domain 707 762 2.7E-6 T 25-04-2016 IPR025949 PapC-like, C-terminal domain SMD_RS07040 c75ed3b04e813a7d06701180f9c3c2da 789 Pfam PF00577 Outer membrane usher protein 204 696 4.8E-23 T 25-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SMD_RS18680 0238863db7ac9fb4d5f119233af68fca 144 Pfam PF07179 SseB protein N-terminal domain 18 129 3.3E-14 T 25-04-2016 IPR009839 SseB protein N-terminal domain SMD_RS18250 dcac11713b965ced983f079c23f674ea 83 SUPERFAMILY SSF55021 1 74 3.05E-6 T 25-04-2016 SMD_RS18250 dcac11713b965ced983f079c23f674ea 83 Gene3D G3DSA:3.30.70.260 1 75 3.1E-11 T 25-04-2016 SMD_RS18250 dcac11713b965ced983f079c23f674ea 83 Pfam PF13710 ACT domain 12 73 7.4E-20 T 25-04-2016 SMD_RS18250 dcac11713b965ced983f079c23f674ea 83 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 73 7.0E-5 T 25-04-2016 SMD_RS08885 fdd1b8b6f351cb7ab69917994871f362 163 Pfam PF02631 RecX family 42 158 3.6E-28 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SMD_RS08885 fdd1b8b6f351cb7ab69917994871f362 163 Gene3D G3DSA:1.10.10.10 66 110 5.2E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08885 fdd1b8b6f351cb7ab69917994871f362 163 Gene3D G3DSA:1.10.10.10 112 163 3.2E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08885 fdd1b8b6f351cb7ab69917994871f362 163 Hamap MF_01114 Regulatory protein RecX [recX]. 10 163 13.937 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SMD_RS08885 fdd1b8b6f351cb7ab69917994871f362 163 Gene3D G3DSA:1.10.10.10 19 65 1.3E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS08885 fdd1b8b6f351cb7ab69917994871f362 163 PANTHER PTHR33602 3 163 3.2E-38 T 25-04-2016 SMD_RS13250 004566d8bf79738e457f4b4b64cf3fc0 396 Gene3D G3DSA:1.20.1250.20 20 194 3.1E-18 T 25-04-2016 SMD_RS13250 004566d8bf79738e457f4b4b64cf3fc0 396 PANTHER PTHR23501 19 385 3.1E-87 T 25-04-2016 SMD_RS13250 004566d8bf79738e457f4b4b64cf3fc0 396 Gene3D G3DSA:1.20.1250.20 223 393 2.8E-12 T 25-04-2016 SMD_RS13250 004566d8bf79738e457f4b4b64cf3fc0 396 Pfam PF07690 Major Facilitator Superfamily 27 301 1.1E-24 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS13250 004566d8bf79738e457f4b4b64cf3fc0 396 PANTHER PTHR23501:SF79 19 385 3.1E-87 T 25-04-2016 SMD_RS13250 004566d8bf79738e457f4b4b64cf3fc0 396 SUPERFAMILY SSF103473 16 393 1.7E-45 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS11455 c3b07322d5fa58d207bb47de6761908a 384 Pfam PF00069 Protein kinase domain 27 161 2.1E-16 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMD_RS11455 c3b07322d5fa58d207bb47de6761908a 384 Gene3D G3DSA:1.10.510.10 29 172 3.3E-22 T 25-04-2016 SMD_RS11455 c3b07322d5fa58d207bb47de6761908a 384 PANTHER PTHR24362 1 301 5.5E-18 T 25-04-2016 SMD_RS11455 c3b07322d5fa58d207bb47de6761908a 384 SUPERFAMILY SSF56112 2 162 7.15E-25 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS11455 c3b07322d5fa58d207bb47de6761908a 384 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 77 89 - T 25-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SMD_RS11455 c3b07322d5fa58d207bb47de6761908a 384 SMART SM00220 1 220 1.3E-4 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMD_RS15615 ab0d577eb400cba11a98e29cb8f5ca1d 216 SUPERFAMILY SSF52833 47 211 1.67E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15615 ab0d577eb400cba11a98e29cb8f5ca1d 216 PANTHER PTHR12151 8 215 5.8E-54 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC SMD_RS15615 ab0d577eb400cba11a98e29cb8f5ca1d 216 PANTHER PTHR12151:SF0 8 215 5.8E-54 T 25-04-2016 SMD_RS15615 ab0d577eb400cba11a98e29cb8f5ca1d 216 Pfam PF02630 SCO1/SenC 46 190 5.5E-23 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC SMD_RS15615 ab0d577eb400cba11a98e29cb8f5ca1d 216 Gene3D G3DSA:3.40.30.10 9 213 1.3E-44 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS14670 b9df0ed12f2b538cc313c0eec7dafb96 137 SUPERFAMILY SSF52038 40 130 8.24E-21 T 25-04-2016 IPR000468 Barstar (barnase inhibitor) SMD_RS14670 b9df0ed12f2b538cc313c0eec7dafb96 137 Pfam PF01337 Barstar (barnase inhibitor) 42 123 1.6E-21 T 25-04-2016 IPR000468 Barstar (barnase inhibitor) SMD_RS14670 b9df0ed12f2b538cc313c0eec7dafb96 137 Gene3D G3DSA:3.30.370.10 39 129 3.3E-19 T 25-04-2016 IPR000468 Barstar (barnase inhibitor) SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 SUPERFAMILY SSF46785 22 157 2.51E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 100 5.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 134 154 5.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 5.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 5.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 PANTHER PTHR33164 8 159 1.1E-22 T 25-04-2016 SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 Pfam PF01047 MarR family 50 108 3.2E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 Gene3D G3DSA:1.10.10.10 24 156 1.0E-33 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19785 261418572df483d71bde86e3f68e9f98 166 SMART SM00347 43 144 4.7E-24 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Gene3D G3DSA:3.30.1360.10 15 64 3.0E-10 T 25-04-2016 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Gene3D G3DSA:1.10.150.20 248 323 2.1E-35 T 25-04-2016 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.543 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 326 7.0E-35 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 307 1.1E-23 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 SUPERFAMILY SSF47789 250 323 9.03E-26 T 25-04-2016 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 SUPERFAMILY SSF55257 9 53 5.1E-31 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 SUPERFAMILY SSF55257 178 232 5.1E-31 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 SUPERFAMILY SSF56553 53 177 4.19E-42 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Gene3D G3DSA:2.170.120.12 65 176 1.7E-40 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 PANTHER PTHR32108:SF0 9 329 2.2E-151 T 25-04-2016 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 SMART SM00662 23 233 2.2E-106 T 25-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.6E-24 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 PANTHER PTHR32108 9 329 2.2E-151 T 25-04-2016 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 9.4E-25 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMD_RS04290 872f094d103af1a6617faae6bb8bb082 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 1.7E-109 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMD_RS06100 86b7db04d4025fff190dc8b06fb67d73 414 PANTHER PTHR34289:SF3 2 411 6.7E-111 T 25-04-2016 SMD_RS06100 86b7db04d4025fff190dc8b06fb67d73 414 Pfam PF05684 Protein of unknown function (DUF819) 15 409 7.3E-136 T 25-04-2016 IPR008537 Protein of unknown function DUF819 SMD_RS06100 86b7db04d4025fff190dc8b06fb67d73 414 PANTHER PTHR34289 2 411 6.7E-111 T 25-04-2016 SMD_RS17305 03aa87e18088eb757772726d13545c6e 565 Pfam PF00999 Sodium/hydrogen exchanger family 13 388 1.0E-75 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMD_RS17305 03aa87e18088eb757772726d13545c6e 565 SUPERFAMILY SSF51735 419 550 1.84E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17305 03aa87e18088eb757772726d13545c6e 565 PANTHER PTHR16254 1 552 2.4E-293 T 25-04-2016 SMD_RS17305 03aa87e18088eb757772726d13545c6e 565 PANTHER PTHR16254:SF17 1 552 2.4E-293 T 25-04-2016 SMD_RS17305 03aa87e18088eb757772726d13545c6e 565 Gene3D G3DSA:3.40.50.720 415 550 2.0E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS17305 03aa87e18088eb757772726d13545c6e 565 Pfam PF02254 TrkA-N domain 422 534 4.9E-23 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMD_RS20525 95230c91e95d9d3bc3a98f54eab7bd2c 204 Pfam PF01163 RIO1 family 39 167 1.9E-4 T 25-04-2016 SMD_RS20525 95230c91e95d9d3bc3a98f54eab7bd2c 204 Gene3D G3DSA:1.10.510.10 94 162 5.9E-9 T 25-04-2016 SMD_RS20525 95230c91e95d9d3bc3a98f54eab7bd2c 204 SUPERFAMILY SSF56112 17 164 1.64E-18 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS21495 d94f042b13d19e15b50f14e893dee6c7 590 PANTHER PTHR33361:SF6 5 588 6.2E-220 T 25-04-2016 SMD_RS21495 d94f042b13d19e15b50f14e893dee6c7 590 Pfam PF05960 Bacterial protein of unknown function (DUF885) 70 580 1.7E-157 T 25-04-2016 IPR010281 Protein of unknown function DUF885 SMD_RS21495 d94f042b13d19e15b50f14e893dee6c7 590 PANTHER PTHR33361 5 588 6.2E-220 T 25-04-2016 SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 2.7E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 91 2.7E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 2.7E-5 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 SUPERFAMILY SSF53474 21 270 4.93E-40 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 Pfam PF00561 alpha/beta hydrolase fold 51 150 1.6E-13 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 Gene3D G3DSA:3.40.50.1820 15 269 2.2E-45 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 PANTHER PTHR10992 24 279 2.4E-27 T 25-04-2016 SMD_RS09905 12874ec2f6e22e5e8ef0d34a37255ffd 288 PANTHER PTHR10992:SF771 24 279 2.4E-27 T 25-04-2016 SMD_RS02760 b39d0d960c4f769f7110218f1cf7d67b 120 PANTHER PTHR36121:SF1 5 94 1.7E-30 T 25-04-2016 SMD_RS02760 b39d0d960c4f769f7110218f1cf7d67b 120 PANTHER PTHR36121 5 94 1.7E-30 T 25-04-2016 SMD_RS02760 b39d0d960c4f769f7110218f1cf7d67b 120 Pfam PF04994 TfoX C-terminal domain 5 77 3.0E-24 T 25-04-2016 IPR007077 TfoX, C-terminal SMD_RS02760 b39d0d960c4f769f7110218f1cf7d67b 120 Gene3D G3DSA:1.10.150.20 5 82 2.1E-23 T 25-04-2016 SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 151 8.3E-36 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 25-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 PANTHER PTHR22881 14 160 4.2E-55 T 25-04-2016 SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 3.5E-37 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 SUPERFAMILY SSF55486 23 157 3.91E-44 T 25-04-2016 SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.912 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMD_RS07440 cb9a1ee7e30b764e8a4fe9f5a2784577 161 Gene3D G3DSA:3.40.390.30 26 158 1.3E-47 T 25-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 PANTHER PTHR23508:SF17 9 467 1.9E-273 T 25-04-2016 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 PANTHER PTHR23508 9 467 1.9E-273 T 25-04-2016 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 Pfam PF07690 Major Facilitator Superfamily 78 402 1.8E-35 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 SUPERFAMILY SSF103473 34 447 3.92E-71 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 ProSitePatterns PS00217 Sugar transport proteins signature 2. 146 171 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 Gene3D G3DSA:1.20.1250.20 263 447 1.3E-22 T 25-04-2016 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 Gene3D G3DSA:1.20.1250.20 34 247 2.4E-26 T 25-04-2016 SMD_RS12470 01ce9910671336adf9ce8aa740485782 496 ProSitePatterns PS00216 Sugar transport proteins signature 1. 319 335 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMD_RS04850 88a3bb883dc916d43b815395d76eded4 167 PIRSF PIRSF004982 1 167 6.1E-47 T 25-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SMD_RS04850 88a3bb883dc916d43b815395d76eded4 167 Pfam PF03843 Outer membrane lipoprotein Slp family 15 166 4.3E-45 T 25-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SMD_RS04850 88a3bb883dc916d43b815395d76eded4 167 PANTHER PTHR37530 1 167 1.5E-43 T 25-04-2016 SMD_RS07280 c4eb4a626e8d3063a3595d3bc5fc4d6d 233 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 18 135 1.5E-27 T 25-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMD_RS07280 c4eb4a626e8d3063a3595d3bc5fc4d6d 233 Gene3D G3DSA:3.10.50.40 118 233 9.8E-21 T 25-04-2016 SMD_RS07280 c4eb4a626e8d3063a3595d3bc5fc4d6d 233 SUPERFAMILY SSF54534 27 233 4.32E-35 T 25-04-2016 SMD_RS07280 c4eb4a626e8d3063a3595d3bc5fc4d6d 233 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 144 230 4.9E-8 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMD_RS07280 c4eb4a626e8d3063a3595d3bc5fc4d6d 233 Gene3D G3DSA:1.10.287.460 11 117 4.2E-27 T 25-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 SUPERFAMILY SSF51735 3 157 2.32E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 1.4E-28 T 25-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 PIRSF PIRSF000102 1 326 5.1E-62 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 55.21 T 25-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 Gene3D G3DSA:3.40.50.720 3 155 1.4E-55 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 Gene3D G3DSA:3.90.110.10 157 327 1.2E-68 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 SUPERFAMILY SSF56327 159 327 8.49E-56 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 PANTHER PTHR23382 1 328 3.0E-191 T 25-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 8.0E-140 T 25-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SMD_RS04340 fa287f3b666b5d034fa8ab8a2f7d3b27 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 1.1E-35 T 25-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 PANTHER PTHR30203:SF5 9 467 2.7E-110 T 25-04-2016 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 PANTHER PTHR30203 9 467 2.7E-110 T 25-04-2016 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 Pfam PF02321 Outer membrane efflux protein 69 255 1.6E-17 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 Pfam PF02321 Outer membrane efflux protein 285 461 1.3E-16 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 Gene3D G3DSA:1.20.1600.10 59 468 1.1E-82 T 25-04-2016 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 SUPERFAMILY SSF56954 7 29 1.27E-82 T 25-04-2016 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 SUPERFAMILY SSF56954 60 467 1.27E-82 T 25-04-2016 SMD_RS12840 aba9801da1ac2eae1fc65504cda45565 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 466 5.1E-80 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 Pfam PF00561 alpha/beta hydrolase fold 62 190 1.9E-21 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00412 Epoxide hydrolase signature 149 162 7.0E-5 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00412 Epoxide hydrolase signature 88 103 7.0E-5 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00412 Epoxide hydrolase signature 305 327 7.0E-5 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00412 Epoxide hydrolase signature 135 148 7.0E-5 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PANTHER PTHR10992 24 330 6.7E-78 T 25-04-2016 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PANTHER PTHR10992:SF771 24 330 6.7E-78 T 25-04-2016 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 Gene3D G3DSA:3.40.50.1820 26 329 2.9E-66 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 9.3E-11 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 103 9.3E-11 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 9.3E-11 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS16585 f8b55bc9d6fe6bb26adcc19a9dcfe0fd 331 SUPERFAMILY SSF53474 43 329 3.3E-56 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS07370 02bcc44c38fa061553bc8f074a862694 530 Pfam PF05231 MASE1 20 288 3.9E-17 T 25-04-2016 IPR007895 MASE1 SMD_RS02640 d6d1c029d2f7249fce5b77b8f859b918 284 PANTHER PTHR30433 1 284 3.8E-156 T 25-04-2016 SMD_RS02640 d6d1c029d2f7249fce5b77b8f859b918 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 25-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SMD_RS02640 d6d1c029d2f7249fce5b77b8f859b918 284 PANTHER PTHR30433:SF4 1 284 3.8E-156 T 25-04-2016 IPR022522 Flagellar motor stator, MotA SMD_RS02640 d6d1c029d2f7249fce5b77b8f859b918 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.4E-119 T 25-04-2016 IPR022522 Flagellar motor stator, MotA SMD_RS02640 d6d1c029d2f7249fce5b77b8f859b918 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 235 5.2E-8 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 SMART SM00448 1 112 5.0E-41 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 SUPERFAMILY SSF52172 1 170 2.05E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 PANTHER PTHR26402:SF600 1 220 1.5E-125 T 25-04-2016 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 Pfam PF00072 Response regulator receiver domain 3 113 3.3E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 Gene3D G3DSA:1.10.10.10 124 221 6.4E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 PANTHER PTHR26402 1 220 1.5E-125 T 25-04-2016 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.1E-24 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 SMART SM00862 145 220 1.9E-25 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS01515 8ea3485fb6ebceadebd003035503a023 227 Gene3D G3DSA:3.40.50.2300 1 123 4.0E-38 T 25-04-2016 SMD_RS09335 eb457150a1ea29c5b5b6665f072a931c 125 SUPERFAMILY SSF54593 19 119 2.17E-9 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS09335 eb457150a1ea29c5b5b6665f072a931c 125 Gene3D G3DSA:3.10.180.10 20 120 7.3E-7 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS09335 eb457150a1ea29c5b5b6665f072a931c 125 PANTHER PTHR35908 4 122 5.1E-13 T 25-04-2016 SMD_RS09335 eb457150a1ea29c5b5b6665f072a931c 125 PANTHER PTHR35908:SF1 4 122 5.1E-13 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 Pfam PF07690 Major Facilitator Superfamily 19 410 4.4E-50 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 417 2.0E-75 T 25-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 PANTHER PTHR23501:SF1 12 469 2.6E-233 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 PANTHER PTHR23501 12 469 2.6E-233 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 7.9E-9 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 7.9E-9 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 7.9E-9 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 7.9E-9 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 Gene3D G3DSA:1.20.1250.20 266 462 5.4E-17 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 Gene3D G3DSA:1.20.1250.20 11 196 1.7E-32 T 25-04-2016 SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 SUPERFAMILY SSF103473 9 203 3.53E-68 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS16545 d16c9938c8d823a7fa0f074f2fe96a1e 469 SUPERFAMILY SSF103473 249 459 3.53E-68 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS21500 5f4b29d23328128814c0f03c4d6bc409 115 SMART SM01259 28 101 4.0E-22 T 25-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMD_RS21500 5f4b29d23328128814c0f03c4d6bc409 115 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 23 106 3.0E-40 T 25-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMD_RS21500 5f4b29d23328128814c0f03c4d6bc409 115 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 28 99 6.9E-21 T 25-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMD_RS21500 5f4b29d23328128814c0f03c4d6bc409 115 PIRSF PIRSF028440 4 115 3.0E-47 T 25-04-2016 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis SMD_RS05395 1f6fd0652c808b0b5400937df6bd924c 262 SUPERFAMILY SSF53474 31 259 2.75E-35 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05395 1f6fd0652c808b0b5400937df6bd924c 262 PANTHER PTHR10655 20 260 8.1E-49 T 25-04-2016 SMD_RS05395 1f6fd0652c808b0b5400937df6bd924c 262 Pfam PF00326 Prolyl oligopeptidase family 116 244 2.0E-9 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SMD_RS05395 1f6fd0652c808b0b5400937df6bd924c 262 Gene3D G3DSA:3.40.50.1820 18 261 4.2E-39 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05395 1f6fd0652c808b0b5400937df6bd924c 262 PANTHER PTHR10655:SF24 20 260 8.1E-49 T 25-04-2016 SMD_RS04995 30b476a627d789414fd53d00095e257c 105 Pfam PF00893 Small Multidrug Resistance protein 1 92 7.4E-31 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMD_RS04995 30b476a627d789414fd53d00095e257c 105 PANTHER PTHR30561:SF0 1 104 1.6E-45 T 25-04-2016 SMD_RS04995 30b476a627d789414fd53d00095e257c 105 SUPERFAMILY SSF103481 4 104 3.66E-22 T 25-04-2016 SMD_RS04995 30b476a627d789414fd53d00095e257c 105 PANTHER PTHR30561 1 104 1.6E-45 T 25-04-2016 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 SUPERFAMILY SSF56935 39 764 4.12E-131 T 25-04-2016 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 PANTHER PTHR32552:SF8 8 641 2.1E-210 T 25-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 PANTHER PTHR32552:SF8 659 764 2.1E-210 T 25-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 PANTHER PTHR32552 8 641 2.1E-210 T 25-04-2016 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 PANTHER PTHR32552 659 764 2.1E-210 T 25-04-2016 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 166 4.3E-20 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 Gene3D G3DSA:2.170.130.10 39 176 4.7E-32 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 Pfam PF00593 TonB dependent receptor 511 763 2.3E-36 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS05625 aa36a628899fb8a953f4b33a3857da67 764 Gene3D G3DSA:2.40.170.20 181 764 5.2E-143 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS10890 3b70e76d3c527ebf7fd80c0b7124e842 138 SUPERFAMILY SSF101116 11 130 6.54E-35 T 25-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMD_RS10890 3b70e76d3c527ebf7fd80c0b7124e842 138 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 126 2.3E-25 T 25-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMD_RS10890 3b70e76d3c527ebf7fd80c0b7124e842 138 PANTHER PTHR34773 1 135 2.4E-42 T 25-04-2016 SMD_RS10890 3b70e76d3c527ebf7fd80c0b7124e842 138 Pfam PF02561 Flagellar protein FliS 10 126 3.4E-35 T 25-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMD_RS10890 3b70e76d3c527ebf7fd80c0b7124e842 138 PIRSF PIRSF039090 3 137 3.9E-47 T 25-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMD_RS10890 3b70e76d3c527ebf7fd80c0b7124e842 138 Gene3D G3DSA:1.20.120.340 10 132 2.6E-40 T 25-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMD_RS10560 2c8b8fde881e0ee0df0eb949f75ad5d0 399 PANTHER PTHR36927 1 399 1.3E-56 T 25-04-2016 SMD_RS10560 2c8b8fde881e0ee0df0eb949f75ad5d0 399 Pfam PF01757 Acyltransferase family 4 366 6.7E-22 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SMD_RS09245 c7f978acc1b89518c53e1d48e6014fce 295 PANTHER PTHR23200:SF41 4 292 7.7E-68 T 25-04-2016 SMD_RS09245 c7f978acc1b89518c53e1d48e6014fce 295 PANTHER PTHR23200 4 292 7.7E-68 T 25-04-2016 SMD_RS09245 c7f978acc1b89518c53e1d48e6014fce 295 SUPERFAMILY SSF56281 1 271 5.5E-29 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS09245 c7f978acc1b89518c53e1d48e6014fce 295 Pfam PF00753 Metallo-beta-lactamase superfamily 52 263 1.3E-11 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS09245 c7f978acc1b89518c53e1d48e6014fce 295 Gene3D G3DSA:3.60.15.10 1 269 2.9E-32 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS09245 c7f978acc1b89518c53e1d48e6014fce 295 SMART SM00849 42 263 3.1E-7 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 Pfam PF05230 MASE2 domain 20 107 3.2E-26 T 25-04-2016 IPR007894 MASE2 SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 Gene3D G3DSA:3.30.70.270 192 347 6.2E-48 T 25-04-2016 SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 345 2.4E-41 T 25-04-2016 IPR000160 GGDEF domain SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 SMART SM00267 179 349 8.5E-59 T 25-04-2016 IPR000160 GGDEF domain SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 SUPERFAMILY SSF55073 197 346 9.16E-44 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 PANTHER PTHR10799:SF774 39 189 3.8E-30 T 25-04-2016 SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 PANTHER PTHR10799:SF774 223 344 3.8E-30 T 25-04-2016 SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 PANTHER PTHR10799 39 189 3.8E-30 T 25-04-2016 SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 PANTHER PTHR10799 223 344 3.8E-30 T 25-04-2016 SMD_RS05875 616aec809ff252dbccddc2aa2baa2e72 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 347 6.2E-42 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13295 6598a9b2c377e4377feddb52686c5f70 211 SUPERFAMILY SSF55729 36 198 9.34E-8 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS13295 6598a9b2c377e4377feddb52686c5f70 211 Pfam PF13420 Acetyltransferase (GNAT) domain 43 194 3.0E-18 T 25-04-2016 SMD_RS13295 6598a9b2c377e4377feddb52686c5f70 211 Gene3D G3DSA:3.40.630.30 38 205 1.1E-11 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 SMART SM00671 110 143 5.5E-4 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 SMART SM00671 144 179 1.5E-6 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 SMART SM00671 72 107 1.9E-7 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 SMART SM00671 180 211 97.0 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 SMART SM00671 36 71 1.1E-6 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 SUPERFAMILY SSF81901 12 217 4.53E-45 T 25-04-2016 SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 Gene3D G3DSA:1.25.40.10 17 213 1.3E-44 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 PANTHER PTHR11102 17 212 9.0E-39 T 25-04-2016 SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 Pfam PF08238 Sel1 repeat 72 104 3.5E-5 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 Pfam PF08238 Sel1 repeat 37 70 7.5E-6 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 Pfam PF08238 Sel1 repeat 196 211 2.5 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 Pfam PF08238 Sel1 repeat 144 179 1.5E-7 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS05620 75301912c3e56b3c67b29282d129ab78 239 Pfam PF08238 Sel1 repeat 111 143 1.3E-4 T 25-04-2016 IPR006597 Sel1-like repeat SMD_RS19360 c0cc4d376f6486c64a7280b9c12d27cd 500 SUPERFAMILY SSF46689 6 75 9.32E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS19360 c0cc4d376f6486c64a7280b9c12d27cd 500 Pfam PF00665 Integrase core domain 124 249 4.4E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS19360 c0cc4d376f6486c64a7280b9c12d27cd 500 Gene3D G3DSA:1.10.10.10 13 38 3.1E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19360 c0cc4d376f6486c64a7280b9c12d27cd 500 PANTHER PTHR35004 1 440 8.6E-67 T 25-04-2016 SMD_RS19360 c0cc4d376f6486c64a7280b9c12d27cd 500 Pfam PF13384 Homeodomain-like domain 12 37 1.0E-5 T 25-04-2016 SMD_RS19360 c0cc4d376f6486c64a7280b9c12d27cd 500 PANTHER PTHR35004:SF2 1 440 8.6E-67 T 25-04-2016 SMD_RS04945 4f6146d38bb9122a0d1b3ecae728a8cc 214 Gene3D G3DSA:3.40.50.150 80 161 4.7E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS04945 4f6146d38bb9122a0d1b3ecae728a8cc 214 SUPERFAMILY SSF53335 80 167 5.69E-15 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS04945 4f6146d38bb9122a0d1b3ecae728a8cc 214 Pfam PF08241 Methyltransferase domain 83 121 1.4E-4 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 25-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PANTHER PTHR11458 1 328 1.7E-188 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 4.9E-140 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 SUPERFAMILY SSF51569 3 328 1.47E-143 T 25-04-2016 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 Gene3D G3DSA:3.20.20.70 2 328 9.2E-151 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 SMART SM01004 3 326 2.3E-242 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 1.2E-57 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 1.2E-57 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 1.2E-57 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 1.2E-57 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 1.2E-57 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 1.2E-57 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS21005 d98d732182cbeeedb7f0b657db064a39 329 PIRSF PIRSF001415 1 329 3.3E-150 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS02895 b7b4f7c1c837e18ed5b1031e5d3c81df 264 PANTHER PTHR30413:SF8 5 264 2.8E-54 T 25-04-2016 SMD_RS02895 b7b4f7c1c837e18ed5b1031e5d3c81df 264 PANTHER PTHR30413 5 264 2.8E-54 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS02895 b7b4f7c1c837e18ed5b1031e5d3c81df 264 Pfam PF01061 ABC-2 type transporter 14 224 1.5E-29 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SMD_RS02895 b7b4f7c1c837e18ed5b1031e5d3c81df 264 PIRSF PIRSF006648 4 258 2.7E-16 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMD_RS09650 3c6ba3c3a6cf9d7892ad59b19a65c638 153 SUPERFAMILY SSF46626 74 143 5.3E-20 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS09650 3c6ba3c3a6cf9d7892ad59b19a65c638 153 Gene3D G3DSA:1.10.760.10 55 141 3.8E-26 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS09650 3c6ba3c3a6cf9d7892ad59b19a65c638 153 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 72 138 8.6E-8 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMD_RS09650 3c6ba3c3a6cf9d7892ad59b19a65c638 153 PANTHER PTHR33751:SF3 67 139 4.6E-25 T 25-04-2016 SMD_RS09650 3c6ba3c3a6cf9d7892ad59b19a65c638 153 PANTHER PTHR33751 67 139 4.6E-25 T 25-04-2016 SMD_RS15795 206331d0a4e797b37352d47fced08178 257 SUPERFAMILY SSF54001 128 255 4.41E-40 T 25-04-2016 SMD_RS15795 206331d0a4e797b37352d47fced08178 257 PANTHER PTHR21666 109 255 1.5E-39 T 25-04-2016 SMD_RS15795 206331d0a4e797b37352d47fced08178 257 Gene3D G3DSA:3.90.1720.10 127 255 4.8E-44 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS15795 206331d0a4e797b37352d47fced08178 257 Pfam PF00877 NlpC/P60 family 145 254 5.3E-30 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS06110 8ee126d6ab693759634c6ac549161318 86 SUPERFAMILY SSF55229 32 81 4.84E-13 T 25-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SMD_RS06110 8ee126d6ab693759634c6ac549161318 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 17.005 T 25-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SMD_RS06110 8ee126d6ab693759634c6ac549161318 86 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 5.0E-21 T 25-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SMD_RS06110 8ee126d6ab693759634c6ac549161318 86 Gene3D G3DSA:3.30.1070.10 32 81 4.0E-17 T 25-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SMD_RS06110 8ee126d6ab693759634c6ac549161318 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 2.5E-26 T 25-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SMD_RS06110 8ee126d6ab693759634c6ac549161318 86 PANTHER PTHR33404 1 81 8.6E-23 T 25-04-2016 SMD_RS03970 73ee18e2af0347006927924cc37db5c5 424 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 280 2.5E-71 T 25-04-2016 IPR017039 Virulence factor BrkB SMD_RS03970 73ee18e2af0347006927924cc37db5c5 424 PANTHER PTHR30213 10 415 1.8E-125 T 25-04-2016 SMD_RS03970 73ee18e2af0347006927924cc37db5c5 424 Pfam PF03631 Virulence factor BrkB 33 279 2.3E-56 T 25-04-2016 IPR017039 Virulence factor BrkB SMD_RS03970 73ee18e2af0347006927924cc37db5c5 424 PANTHER PTHR30213:SF0 10 415 1.8E-125 T 25-04-2016 SMD_RS03970 73ee18e2af0347006927924cc37db5c5 424 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 21 309 21.567 T 25-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 220 6.0E-23 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 221 9.2E-26 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 PANTHER PTHR33446 38 221 1.2E-18 T 25-04-2016 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 SUPERFAMILY SSF74653 142 218 8.11E-22 T 25-04-2016 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 Gene3D G3DSA:3.30.1150.10 133 220 8.8E-17 T 25-04-2016 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 159 177 8.6E-8 T 25-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 159 8.6E-8 T 25-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 67 77 8.6E-8 T 25-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMD_RS00150 5560e1fc5edcd2d7419883376c4b336b 221 PANTHER PTHR33446:SF2 38 221 1.2E-18 T 25-04-2016 SMD_RS11875 72338a4a5e3818998b0d992be3226a28 325 Pfam PF08908 Domain of unknown function (DUF1852) 4 324 6.5E-182 T 25-04-2016 IPR015004 Protein of unknown function DUF1852 SMD_RS11875 72338a4a5e3818998b0d992be3226a28 325 PIRSF PIRSF034367 1 325 8.2E-185 T 25-04-2016 IPR015004 Protein of unknown function DUF1852 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 SUPERFAMILY SSF50044 62 114 1.71E-9 T 25-04-2016 IPR001452 SH3 domain GO:0005515 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 SMART SM00326 61 113 5.7E-5 T 25-04-2016 IPR001452 SH3 domain GO:0005515 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 SMART SM00326 1 59 1.2 T 25-04-2016 IPR001452 SH3 domain GO:0005515 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 Pfam PF07653 Variant SH3 domain 3 56 5.0E-9 T 25-04-2016 IPR011511 Variant SH3 domain SMD_RS20405 9f772066af03b40ed8994555e598e767 117 Gene3D G3DSA:2.30.30.40 3 59 4.8E-7 T 25-04-2016 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 Gene3D G3DSA:2.30.30.40 60 112 1.1E-9 T 25-04-2016 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 SUPERFAMILY SSF50044 2 60 2.72E-7 T 25-04-2016 IPR001452 SH3 domain GO:0005515 SMD_RS20405 9f772066af03b40ed8994555e598e767 117 PIRSF PIRSF034961 1 114 6.5E-41 T 25-04-2016 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 SMD_RS20155 6e55d297558938f51b6a1a0621ad41f4 295 Pfam PF03186 CobD/Cbib protein 9 248 2.3E-7 T 25-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SMD_RS20155 6e55d297558938f51b6a1a0621ad41f4 295 PANTHER PTHR38684 4 295 8.1E-68 T 25-04-2016 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 Gene3D G3DSA:2.40.170.20 176 734 5.7E-65 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 Gene3D G3DSA:2.170.130.10 40 166 4.4E-27 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 PANTHER PTHR30069 41 285 4.3E-53 T 25-04-2016 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 PANTHER PTHR30069 314 525 4.3E-53 T 25-04-2016 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 Pfam PF00593 TonB dependent receptor 466 733 1.6E-24 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 PANTHER PTHR30069:SF13 41 285 4.3E-53 T 25-04-2016 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 PANTHER PTHR30069:SF13 314 525 4.3E-53 T 25-04-2016 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 SUPERFAMILY SSF56935 45 736 1.76E-93 T 25-04-2016 SMD_RS06735 3b323bb106d76b429c0a79529d844345 736 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 161 2.0E-18 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 16 464 7.2E-191 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PANTHER PTHR22594 6 178 6.7E-237 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PANTHER PTHR22594 197 463 6.7E-237 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 Gene3D G3DSA:3.30.930.10 107 461 2.0E-109 T 25-04-2016 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 SUPERFAMILY SSF55681 104 463 5.18E-96 T 25-04-2016 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 222 235 9.2E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 218 9.2E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 419 433 9.2E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 379 395 9.2E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 Pfam PF01336 OB-fold nucleic acid binding domain 20 95 8.9E-10 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PANTHER PTHR22594:SF6 6 178 6.7E-237 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 PANTHER PTHR22594:SF6 197 463 6.7E-237 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 8.2E-82 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 464 45.239 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 Gene3D G3DSA:2.40.50.140 16 102 6.1E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS14260 3c62c4cb11ecadf0f13824b7be98d987 464 SUPERFAMILY SSF50249 16 100 6.43E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMD_RS13140 0bd289a78dde0cc7a38c9e2809fee94e 158 Pfam PF07811 TadE-like protein 11 54 4.6E-8 T 25-04-2016 IPR012495 TadE-like SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 Gene3D G3DSA:1.10.3860.10 8 429 3.2E-109 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 SUPERFAMILY SSF118215 13 425 1.06E-100 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 Pfam PF00375 Sodium:dicarboxylate symporter family 13 425 4.9E-109 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PANTHER PTHR11958 1 427 6.6E-140 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PRINTS PR00173 Glutamate-aspartate symporter signature 63 83 7.4E-34 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PRINTS PR00173 Glutamate-aspartate symporter signature 318 344 7.4E-34 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PRINTS PR00173 Glutamate-aspartate symporter signature 93 118 7.4E-34 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PRINTS PR00173 Glutamate-aspartate symporter signature 380 400 7.4E-34 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PRINTS PR00173 Glutamate-aspartate symporter signature 353 372 7.4E-34 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PRINTS PR00173 Glutamate-aspartate symporter signature 170 192 7.4E-34 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS17740 e84e3899964526fa4d9b252d0591b515 439 PANTHER PTHR11958:SF44 1 427 6.6E-140 T 25-04-2016 SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 373 4.0E-82 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 SUPERFAMILY SSF111369 51 296 6.8E-78 T 25-04-2016 SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 PANTHER PTHR30158:SF3 1 395 2.6E-140 T 25-04-2016 SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 290 6.1E-14 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 Gene3D G3DSA:2.40.50.100 64 96 8.9E-25 T 25-04-2016 SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 Gene3D G3DSA:2.40.50.100 171 205 8.9E-25 T 25-04-2016 SMD_RS20905 1549c59f582c476e962b131136d61ee7 398 PANTHER PTHR30158 1 395 2.6E-140 T 25-04-2016 SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 Pfam PF00535 Glycosyl transferase family 2 840 953 1.3E-20 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 PANTHER PTHR41244 31 463 2.2E-104 T 25-04-2016 SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 Pfam PF14307 Glycosyltransferase WbsX 124 460 2.8E-129 T 25-04-2016 IPR032719 Glycosyltransferase WbsX SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 Pfam PF00534 Glycosyl transferases group 1 646 813 6.0E-23 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 PANTHER PTHR41244:SF1 31 463 2.2E-104 T 25-04-2016 SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 SUPERFAMILY SSF53756 472 830 3.5E-46 T 25-04-2016 SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 Gene3D G3DSA:3.40.50.2000 639 813 4.6E-24 T 25-04-2016 SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 Gene3D G3DSA:3.90.550.10 837 1092 1.0E-39 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS02910 218b13b83f78c3b56d1ec766c70fc623 1122 SUPERFAMILY SSF53448 837 1074 3.09E-37 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS17400 afadd6dd06c74ae885c6cfc723055038 256 SUPERFAMILY SSF64438 6 254 4.21E-69 T 25-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SMD_RS17400 afadd6dd06c74ae885c6cfc723055038 256 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 37 254 1.3E-47 T 25-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SMD_RS17400 afadd6dd06c74ae885c6cfc723055038 256 PANTHER PTHR30616:SF3 7 256 1.3E-110 T 25-04-2016 SMD_RS17400 afadd6dd06c74ae885c6cfc723055038 256 Gene3D G3DSA:3.60.140.10 6 254 4.6E-84 T 25-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SMD_RS17400 afadd6dd06c74ae885c6cfc723055038 256 PANTHER PTHR30616 7 256 1.3E-110 T 25-04-2016 SMD_RS17400 afadd6dd06c74ae885c6cfc723055038 256 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 253 1.6E-64 T 25-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 PANTHER PTHR11835 4 353 7.5E-187 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 Gene3D G3DSA:3.40.718.10 2 352 9.7E-130 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 347 3.1E-148 T 25-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 SMART SM01329 4 348 1.9E-186 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 SUPERFAMILY SSF53659 4 352 9.54E-119 T 25-04-2016 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 PANTHER PTHR11835:SF35 4 353 7.5E-187 T 25-04-2016 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 348 5.9E-136 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS18280 2c625037496bcc3a3f1967dedc4dabeb 353 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 352 47.313 T 25-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 Pfam PF00593 TonB dependent receptor 528 821 4.9E-25 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 SUPERFAMILY SSF56935 158 622 5.49E-64 T 25-04-2016 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 SUPERFAMILY SSF56935 658 823 5.49E-64 T 25-04-2016 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 SMART SM00965 55 106 8.5E-7 T 25-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 Gene3D G3DSA:2.170.130.10 158 255 4.4E-23 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 PANTHER PTHR32552 649 823 2.9E-16 T 25-04-2016 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 PANTHER PTHR32552 158 623 2.9E-16 T 25-04-2016 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 Gene3D G3DSA:2.40.170.20 256 622 3.7E-52 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 Gene3D G3DSA:2.40.170.20 657 823 3.7E-52 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13465 15a05823c32124d5a7d27003e417d569 823 Pfam PF07715 TonB-dependent Receptor Plug Domain 152 250 1.7E-8 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 PIRSF PIRSF000337 3 441 8.8E-140 T 25-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 Gene3D G3DSA:3.20.20.30 346 430 3.2E-129 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 Gene3D G3DSA:3.20.20.30 3 305 3.2E-129 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 PANTHER PTHR30011:SF22 1 447 2.2E-191 T 25-04-2016 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 PANTHER PTHR30011 1 447 2.2E-191 T 25-04-2016 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 Pfam PF00296 Luciferase-like monooxygenase 20 383 6.8E-62 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 SUPERFAMILY SSF51679 5 431 4.06E-130 T 25-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SMD_RS10005 90af99b76348a323eaf1c20950ecde91 447 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 426 6.7E-156 T 25-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 SMD_RS11045 0ad24ff95f892637fcf92be136b1703a 108 PANTHER PTHR33473 21 108 1.3E-41 T 25-04-2016 SMD_RS11045 0ad24ff95f892637fcf92be136b1703a 108 Gene3D G3DSA:3.30.1390.10 11 108 1.2E-43 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMD_RS11045 0ad24ff95f892637fcf92be136b1703a 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 26 104 8.5E-34 T 25-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 SMD_RS11045 0ad24ff95f892637fcf92be136b1703a 108 SUPERFAMILY SSF54736 23 107 8.37E-33 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMD_RS11045 0ad24ff95f892637fcf92be136b1703a 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 5 103 29.059 T 25-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SMD_RS13205 40b322ff94533199503baaa97de0bdc8 548 PANTHER PTHR23513 5 435 5.0E-147 T 25-04-2016 SMD_RS13205 40b322ff94533199503baaa97de0bdc8 548 Gene3D G3DSA:1.20.1250.20 27 211 3.5E-20 T 25-04-2016 SMD_RS13205 40b322ff94533199503baaa97de0bdc8 548 SUPERFAMILY SSF103473 25 407 4.97E-48 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS13205 40b322ff94533199503baaa97de0bdc8 548 Gene3D G3DSA:1.20.1250.20 241 411 2.8E-16 T 25-04-2016 SMD_RS13205 40b322ff94533199503baaa97de0bdc8 548 PANTHER PTHR23513:SF7 5 435 5.0E-147 T 25-04-2016 SMD_RS13205 40b322ff94533199503baaa97de0bdc8 548 Pfam PF05977 Transmembrane secretion effector 15 531 3.4E-183 T 25-04-2016 IPR010290 Transmembrane secretion effector SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 2.6E-12 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 2.6E-12 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 2.6E-12 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 SUPERFAMILY SSF53474 4 270 4.29E-64 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PANTHER PTHR10992:SF806 6 270 2.7E-78 T 25-04-2016 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 Pfam PF00561 alpha/beta hydrolase fold 19 250 2.3E-27 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00412 Epoxide hydrolase signature 211 227 5.2E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00412 Epoxide hydrolase signature 245 267 5.2E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00412 Epoxide hydrolase signature 44 59 5.2E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PRINTS PR00412 Epoxide hydrolase signature 24 42 5.2E-8 T 25-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 Gene3D G3DSA:3.40.50.1820 5 269 1.3E-68 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS02380 b4f242c493b23d39ad57ee9cc61232a7 270 PANTHER PTHR10992 6 270 2.7E-78 T 25-04-2016 SMD_RS08475 118a7f616fe57e0033c25759b0f4f7c7 496 Pfam PF05136 Phage portal protein, lambda family 39 378 1.7E-83 T 25-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 SMD_RS08475 118a7f616fe57e0033c25759b0f4f7c7 496 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 51 470 3.1E-64 T 25-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 SMD_RS05140 6fee6e0a2da9c69223ac1d99d408fd9c 169 PANTHER PTHR38099 1 169 3.8E-65 T 25-04-2016 SMD_RS05140 6fee6e0a2da9c69223ac1d99d408fd9c 169 Pfam PF02620 Uncharacterized ACR, COG1399 61 167 2.3E-14 T 25-04-2016 IPR003772 Protein of unknown function DUF177 SMD_RS10835 0d82933cc66a7064567a5f26961d7d7c 213 PANTHER PTHR34982:SF1 45 211 1.2E-29 T 25-04-2016 SMD_RS10835 0d82933cc66a7064567a5f26961d7d7c 213 Pfam PF02108 Flagellar assembly protein FliH 80 199 3.0E-20 T 25-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SMD_RS10835 0d82933cc66a7064567a5f26961d7d7c 213 PANTHER PTHR34982 45 211 1.2E-29 T 25-04-2016 SMD_RS13475 52f13b3f17fb2772d36993465b150b9e 237 SUPERFAMILY SSF74653 156 234 1.23E-15 T 25-04-2016 SMD_RS13475 52f13b3f17fb2772d36993465b150b9e 237 Gene3D G3DSA:3.30.1150.10 126 235 2.9E-20 T 25-04-2016 SMD_RS13475 52f13b3f17fb2772d36993465b150b9e 237 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 236 7.3E-21 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS13475 52f13b3f17fb2772d36993465b150b9e 237 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 160 236 9.4E-19 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 SMART SM01103 5 88 8.6E-35 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 SUPERFAMILY SSF75471 4 98 3.01E-27 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 PANTHER PTHR31846 5 100 8.9E-28 T 25-04-2016 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 2.3E-26 T 25-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 1.8E-20 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 2.0E-40 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMD_RS08825 ab5f1a8d8ab1b051203d1db17a9c8842 101 Gene3D G3DSA:3.30.110.60 5 98 3.1E-29 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 Pfam PF13437 HlyD family secretion protein 156 237 1.4E-8 T 25-04-2016 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 PANTHER PTHR30367:SF5 9 291 1.0E-80 T 25-04-2016 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 SUPERFAMILY SSF111369 41 217 1.14E-15 T 25-04-2016 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 PANTHER PTHR30367 9 291 1.0E-80 T 25-04-2016 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 Pfam PF13533 Biotin-lipoyl like 47 94 2.5E-15 T 25-04-2016 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 Gene3D G3DSA:2.40.50.100 47 80 1.5E-14 T 25-04-2016 SMD_RS12835 1db2c3e121eee723fb870efa6bc59637 294 Gene3D G3DSA:2.40.50.100 153 186 1.5E-14 T 25-04-2016 SMD_RS12845 e8029217e0d888015f773f12e927a83b 115 Pfam PF11776 Nickel/cobalt transporter regulator 60 111 6.2E-18 T 25-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB SMD_RS12845 e8029217e0d888015f773f12e927a83b 115 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 57 112 1.0E-6 T 25-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB SMD_RS20415 e03c7430731be8aa7b49d1a47419fe6b 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 2.6E-7 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS20415 e03c7430731be8aa7b49d1a47419fe6b 128 SUPERFAMILY SSF54593 10 123 4.4E-21 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS20415 e03c7430731be8aa7b49d1a47419fe6b 128 PIRSF PIRSF039020 1 122 1.1E-41 T 25-04-2016 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase SMD_RS20415 e03c7430731be8aa7b49d1a47419fe6b 128 Gene3D G3DSA:3.10.180.10 10 123 6.7E-23 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS21615 f7ab78c718e885e1e16ae44ec88d6f3f 598 PANTHER PTHR12815:SF12 13 598 3.6E-204 T 25-04-2016 SMD_RS21615 f7ab78c718e885e1e16ae44ec88d6f3f 598 PANTHER PTHR12815 13 598 3.6E-204 T 25-04-2016 SMD_RS21615 f7ab78c718e885e1e16ae44ec88d6f3f 598 Pfam PF01103 Surface antigen 309 595 6.4E-33 T 25-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SMD_RS21615 f7ab78c718e885e1e16ae44ec88d6f3f 598 Pfam PF07244 Surface antigen variable number repeat 124 197 1.3E-5 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMD_RS21615 f7ab78c718e885e1e16ae44ec88d6f3f 598 Gene3D G3DSA:2.40.160.50 252 596 3.5E-19 T 25-04-2016 SMD_RS18780 c52424858026d123e48554c554aa470b 146 SUPERFAMILY SSF52172 6 142 8.25E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS18780 c52424858026d123e48554c554aa470b 146 SMART SM00448 5 129 2.2E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS18780 c52424858026d123e48554c554aa470b 146 Gene3D G3DSA:3.40.50.2300 5 137 7.1E-33 T 25-04-2016 SMD_RS18780 c52424858026d123e48554c554aa470b 146 PANTHER PTHR26402 5 132 1.4E-29 T 25-04-2016 SMD_RS18780 c52424858026d123e48554c554aa470b 146 Pfam PF00072 Response regulator receiver domain 7 129 1.3E-19 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS00975 2beb7a51283f8df7cd33eec6c8c9f8d0 324 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 20 317 1.5E-75 T 25-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- SMD_RS00975 2beb7a51283f8df7cd33eec6c8c9f8d0 324 Pfam PF04261 Dyp-type peroxidase family 20 317 2.6E-80 T 25-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- SMD_RS00975 2beb7a51283f8df7cd33eec6c8c9f8d0 324 PANTHER PTHR30521 45 322 3.4E-85 T 25-04-2016 SMD_RS00975 2beb7a51283f8df7cd33eec6c8c9f8d0 324 PANTHER PTHR30521:SF0 45 322 3.4E-85 T 25-04-2016 SMD_RS00975 2beb7a51283f8df7cd33eec6c8c9f8d0 324 SUPERFAMILY SSF54909 19 321 3.58E-93 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 Pfam PF00825 Ribonuclease P 2 79 8.3E-19 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 23 37 - T 25-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 1 72 7.0E-11 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 PANTHER PTHR33992 1 100 3.3E-22 T 25-04-2016 SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 SUPERFAMILY SSF54211 6 80 8.34E-18 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 Gene3D G3DSA:3.30.230.10 2 82 1.7E-21 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMD_RS21970 206b745a72349fab8b9044aa03d03647 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 80 7.6E-16 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMD_RS05935 cd89b2838094ab7986484b7f99db0624 378 Gene3D G3DSA:3.60.21.10 151 331 6.4E-25 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS05935 cd89b2838094ab7986484b7f99db0624 378 PANTHER PTHR31302 1 378 8.6E-61 T 25-04-2016 SMD_RS05935 cd89b2838094ab7986484b7f99db0624 378 Pfam PF00149 Calcineurin-like phosphoesterase 152 317 8.1E-12 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS05935 cd89b2838094ab7986484b7f99db0624 378 SUPERFAMILY SSF56300 148 377 2.67E-34 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS20140 a133e74250782cdd6d2d0ad893c24f73 95 PANTHER PTHR14948 14 68 1.8E-15 T 25-04-2016 SMD_RS20140 a133e74250782cdd6d2d0ad893c24f73 95 Pfam PF04505 Interferon-induced transmembrane protein 14 78 3.5E-23 T 25-04-2016 IPR007593 CD225/Dispanin family GO:0009607|GO:0016021 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PANTHER PTHR18901 1 221 3.8E-61 T 25-04-2016 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.7E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.7E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 1.7E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.7E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.7E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 SUPERFAMILY SSF56784 12 221 4.13E-53 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 193 7.0E-20 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 193 1.3E-30 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 Gene3D G3DSA:3.40.50.1000 97 221 1.7E-45 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 Gene3D G3DSA:3.40.50.1000 12 25 1.7E-45 T 25-04-2016 IPR023214 HAD-like domain SMD_RS02705 35a95c20ccdb257cc11c9c26f189d458 227 PANTHER PTHR18901:SF34 1 221 3.8E-61 T 25-04-2016 SMD_RS06225 38e95b6f3434ec25d1294c1a6b845db2 135 PANTHER PTHR31793 10 133 3.3E-32 T 25-04-2016 SMD_RS06225 38e95b6f3434ec25d1294c1a6b845db2 135 PANTHER PTHR31793:SF1 10 133 3.3E-32 T 25-04-2016 SMD_RS06225 38e95b6f3434ec25d1294c1a6b845db2 135 Pfam PF13279 Thioesterase-like superfamily 15 133 9.0E-22 T 25-04-2016 SMD_RS06225 38e95b6f3434ec25d1294c1a6b845db2 135 Gene3D G3DSA:3.10.129.10 9 133 3.4E-38 T 25-04-2016 IPR029069 HotDog domain SMD_RS06225 38e95b6f3434ec25d1294c1a6b845db2 135 SUPERFAMILY SSF54637 10 133 5.19E-34 T 25-04-2016 IPR029069 HotDog domain SMD_RS19625 7b1ed2375a89c2c589090992ab334e54 418 Pfam PF04932 O-Antigen ligase 184 339 8.6E-17 T 25-04-2016 IPR007016 O-antigen ligase-related SMD_RS19625 7b1ed2375a89c2c589090992ab334e54 418 PANTHER PTHR37422 20 404 2.0E-71 T 25-04-2016 SMD_RS19625 7b1ed2375a89c2c589090992ab334e54 418 PANTHER PTHR37422:SF2 20 404 2.0E-71 T 25-04-2016 SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 Gene3D G3DSA:1.10.530.10 261 376 6.1E-54 T 25-04-2016 SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 Gene3D G3DSA:1.10.530.10 111 153 6.1E-54 T 25-04-2016 SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 PANTHER PTHR30163:SF0 1 377 3.2E-163 T 25-04-2016 SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 Pfam PF13406 Transglycosylase SLT domain 70 371 4.9E-94 T 25-04-2016 IPR031304 Transglycosylase SLT domain 2 SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 PANTHER PTHR30163 1 377 3.2E-163 T 25-04-2016 IPR011757 Lytic transglycosylase MltB SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 72 373 2.1E-116 T 25-04-2016 IPR011757 Lytic transglycosylase MltB SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 SUPERFAMILY SSF53955 71 376 1.87E-83 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 Gene3D G3DSA:1.10.530.10 154 169 1.0E-4 T 25-04-2016 SMD_RS18850 dcb213f9c1deb468683b403f2564b2e1 381 Gene3D G3DSA:1.10.530.10 227 257 1.0E-4 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 477 5.3E-152 T 25-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Pfam PF02321 Outer membrane efflux protein 298 475 2.3E-28 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Pfam PF02321 Outer membrane efflux protein 76 266 7.3E-27 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 SUPERFAMILY SSF56954 6 37 1.16E-109 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 SUPERFAMILY SSF56954 67 480 1.16E-109 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Gene3D G3DSA:2.20.200.10 112 153 4.7E-16 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Gene3D G3DSA:2.20.200.10 327 362 4.7E-16 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 PANTHER PTHR30203:SF6 1 497 1.0E-190 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Gene3D G3DSA:1.20.1600.10 63 102 1.3E-98 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Gene3D G3DSA:1.20.1600.10 154 326 1.3E-98 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 Gene3D G3DSA:1.20.1600.10 364 477 1.3E-98 T 25-04-2016 SMD_RS07125 b55800ca1344a3135eee0ae494d35368 497 PANTHER PTHR30203 1 497 1.0E-190 T 25-04-2016 SMD_RS12890 2db1932c71d6403e2617261dedbc5286 306 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 178 1.4E-8 T 25-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SMD_RS12890 2db1932c71d6403e2617261dedbc5286 306 Gene3D G3DSA:3.40.630.10 249 302 3.4E-61 T 25-04-2016 SMD_RS12890 2db1932c71d6403e2617261dedbc5286 306 Gene3D G3DSA:3.40.630.10 13 212 3.4E-61 T 25-04-2016 SMD_RS12890 2db1932c71d6403e2617261dedbc5286 306 SUPERFAMILY SSF53187 35 265 1.12E-36 T 25-04-2016 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 209 284 8.2E-20 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 PANTHER PTHR33446 79 275 3.1E-15 T 25-04-2016 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 Gene3D G3DSA:3.30.1150.10 182 288 5.6E-21 T 25-04-2016 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 207 274 2.2E-17 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 PANTHER PTHR33446:SF2 79 275 3.1E-15 T 25-04-2016 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 SUPERFAMILY SSF74653 107 116 1.7E-19 T 25-04-2016 SMD_RS16795 d084ada34bd4111269e667ea4c0ee8a7 294 SUPERFAMILY SSF74653 181 290 1.7E-19 T 25-04-2016 SMD_RS05615 e607807fbbeedd95a4da580bec5fabdf 225 SUPERFAMILY SSF51197 3 177 3.57E-5 T 25-04-2016 SMD_RS05615 e607807fbbeedd95a4da580bec5fabdf 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 46.584 T 25-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 SMD_RS05615 e607807fbbeedd95a4da580bec5fabdf 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 5.5E-14 T 25-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SMD_RS05615 e607807fbbeedd95a4da580bec5fabdf 225 SMART SM00702 1 176 2.9E-28 T 25-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 SMD_RS05615 e607807fbbeedd95a4da580bec5fabdf 225 PANTHER PTHR41536:SF1 2 225 6.7E-117 T 25-04-2016 SMD_RS05615 e607807fbbeedd95a4da580bec5fabdf 225 PANTHER PTHR41536 2 225 6.7E-117 T 25-04-2016 SMD_RS11490 fbf14d823f1cd1bd7e09775c94bab9d3 353 PANTHER PTHR30388 40 348 2.0E-42 T 25-04-2016 SMD_RS11490 fbf14d823f1cd1bd7e09775c94bab9d3 353 PANTHER PTHR30388:SF4 40 348 2.0E-42 T 25-04-2016 SMD_RS11490 fbf14d823f1cd1bd7e09775c94bab9d3 353 Pfam PF13478 XdhC Rossmann domain 209 344 4.9E-25 T 25-04-2016 IPR027051 XdhC Rossmann domain SMD_RS11490 fbf14d823f1cd1bd7e09775c94bab9d3 353 Pfam PF02625 XdhC and CoxI family 50 108 5.6E-13 T 25-04-2016 IPR003777 XdhC- CoxI SMD_RS06315 5a2de7d20150900cf830fa83995ecef2 957 SMART SM00869 677 947 1.4E-29 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS06315 5a2de7d20150900cf830fa83995ecef2 957 Pfam PF03797 Autotransporter beta-domain 676 941 1.1E-33 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS06315 5a2de7d20150900cf830fa83995ecef2 957 SUPERFAMILY SSF103515 638 957 4.05E-41 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS06315 5a2de7d20150900cf830fa83995ecef2 957 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 658 957 1.5E-26 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SMD_RS06315 5a2de7d20150900cf830fa83995ecef2 957 Gene3D G3DSA:2.40.128.130 670 957 5.0E-40 T 25-04-2016 IPR005546 Autotransporter beta-domain SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 Gene3D G3DSA:3.90.1150.10 276 393 8.5E-29 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 Gene3D G3DSA:3.40.640.10 56 275 4.0E-61 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 Pfam PF00155 Aminotransferase class I and II 38 386 2.2E-52 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 PANTHER PTHR11751 13 393 1.2E-191 T 25-04-2016 SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 SUPERFAMILY SSF53383 11 392 5.45E-96 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS18995 b57edd41f12090fe3b1f32cd88fcd4b9 397 PANTHER PTHR11751:SF401 13 393 1.2E-191 T 25-04-2016 SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 Gene3D G3DSA:2.40.30.10 11 131 4.6E-37 T 25-04-2016 SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 Pfam PF04954 Siderophore-interacting protein 140 257 3.3E-35 T 25-04-2016 IPR007037 Siderophore-interacting protein SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 PANTHER PTHR30157 1 261 4.0E-106 T 25-04-2016 SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 Pfam PF08021 Siderophore-interacting FAD-binding domain 20 132 2.3E-37 T 25-04-2016 IPR013113 FAD-binding 9, siderophore-interacting SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 PANTHER PTHR30157:SF1 1 261 4.0E-106 T 25-04-2016 SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 SUPERFAMILY SSF63380 8 135 2.08E-14 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMD_RS02285 37a1fae1b941ac2dc5ed2c0fd1d2ed0f 265 Gene3D G3DSA:3.40.50.80 135 260 3.5E-38 T 25-04-2016 SMD_RS12205 381924785054d663170b09dbeaf96295 839 SUPERFAMILY SSF49464 750 808 3.02E-5 T 25-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SMD_RS12205 381924785054d663170b09dbeaf96295 839 Pfam PF15976 CS1-pili formation C-terminal 733 827 5.7E-15 T 25-04-2016 IPR031917 Pilus assembly protein, C-terminal domain SMD_RS12205 381924785054d663170b09dbeaf96295 839 Pfam PF16967 Fimbrial, FimD or usher-like 275 339 2.2E-22 T 25-04-2016 IPR032636 Pilus assembly protein domain SMD_RS03335 ad008f67c47cf253b75b4c6d3035d20c 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 151 5.6E-50 T 25-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03335 ad008f67c47cf253b75b4c6d3035d20c 155 PANTHER PTHR21058 1 154 4.6E-66 T 25-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03335 ad008f67c47cf253b75b4c6d3035d20c 155 SUPERFAMILY SSF52121 7 154 1.57E-52 T 25-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03335 ad008f67c47cf253b75b4c6d3035d20c 155 Gene3D G3DSA:3.40.50.960 6 154 9.5E-57 T 25-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03335 ad008f67c47cf253b75b4c6d3035d20c 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 1.3E-42 T 25-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS03335 ad008f67c47cf253b75b4c6d3035d20c 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 28.362 T 25-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMD_RS10300 660600db55fe0b2e54af1eafe65644e4 529 Pfam PF00149 Calcineurin-like phosphoesterase 176 328 2.5E-6 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS10300 660600db55fe0b2e54af1eafe65644e4 529 Gene3D G3DSA:3.60.21.10 133 400 1.0E-31 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS10300 660600db55fe0b2e54af1eafe65644e4 529 SUPERFAMILY SSF56300 134 399 1.06E-34 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS10300 660600db55fe0b2e54af1eafe65644e4 529 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 42 100 9.0E-11 T 25-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal SMD_RS10300 660600db55fe0b2e54af1eafe65644e4 529 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 348 516 6.3E-38 T 25-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal SMD_RS18860 a93f7d1fb4635cc972c6c91bf6e3d933 370 Pfam PF01098 Cell cycle protein 21 362 1.8E-95 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMD_RS18860 a93f7d1fb4635cc972c6c91bf6e3d933 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 363 4.4E-116 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SMD_RS18860 a93f7d1fb4635cc972c6c91bf6e3d933 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 25-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SMD_RS18860 a93f7d1fb4635cc972c6c91bf6e3d933 370 PANTHER PTHR30474 1 362 5.8E-143 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMD_RS18860 a93f7d1fb4635cc972c6c91bf6e3d933 370 PANTHER PTHR30474:SF1 1 362 5.8E-143 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 SUPERFAMILY SSF111369 48 288 2.75E-64 T 25-04-2016 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 Pfam PF00529 HlyD membrane-fusion protein of T1SS 10 349 1.1E-8 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 Gene3D G3DSA:2.40.50.100 167 202 1.9E-21 T 25-04-2016 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 Gene3D G3DSA:2.40.50.100 59 92 1.9E-21 T 25-04-2016 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 362 1.6E-72 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 PANTHER PTHR30158:SF3 1 380 3.9E-107 T 25-04-2016 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 PANTHER PTHR30158 1 380 3.9E-107 T 25-04-2016 SMD_RS10440 610e236e492eeb5fe5e32220a0872fcd 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 281 1.3E-14 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 SUPERFAMILY SSF46689 23 91 6.98E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 SUPERFAMILY SSF48498 105 184 7.31E-7 T 25-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 76 1.4E-13 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 6.8E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 6.8E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 Gene3D G3DSA:1.10.357.10 14 215 2.6E-55 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS18575 0cf0674d863b1f9880b8052b72a30fb9 220 PANTHER PTHR30055 16 213 1.0E-23 T 25-04-2016 SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 Gene3D G3DSA:1.10.530.10 190 348 3.4E-37 T 25-04-2016 SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 Pfam PF01476 LysM domain 488 531 1.2E-8 T 25-04-2016 IPR018392 LysM domain SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 SUPERFAMILY SSF53955 196 342 8.78E-34 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 PANTHER PTHR21666:SF224 488 531 3.9E-175 T 25-04-2016 SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 PANTHER PTHR21666:SF224 156 428 3.9E-175 T 25-04-2016 SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 Gene3D G3DSA:3.10.350.10 486 531 3.5E-10 T 25-04-2016 IPR018392 LysM domain SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 Pfam PF01464 Transglycosylase SLT domain 199 306 1.4E-21 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 SUPERFAMILY SSF54106 486 531 1.09E-6 T 25-04-2016 IPR018392 LysM domain SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 SMART SM00257 487 532 3.1E-8 T 25-04-2016 IPR018392 LysM domain SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 PANTHER PTHR21666 488 531 3.9E-175 T 25-04-2016 SMD_RS15630 d9aea5b40c38200d22ac559a8447845e 536 PANTHER PTHR21666 156 428 3.9E-175 T 25-04-2016 SMD_RS17220 d0588f3050bd943a4b5b642aaa0e841c 639 Pfam PF02705 K+ potassium transporter 28 560 1.0E-214 T 25-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 SMD_RS17220 d0588f3050bd943a4b5b642aaa0e841c 639 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 19 639 33.68 T 25-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup SMD_RS17220 d0588f3050bd943a4b5b642aaa0e841c 639 PANTHER PTHR30540 24 564 4.2E-251 T 25-04-2016 SMD_RS17220 d0588f3050bd943a4b5b642aaa0e841c 639 PANTHER PTHR30540:SF7 24 564 4.2E-251 T 25-04-2016 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 Gene3D G3DSA:1.10.10.10 138 236 1.1E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 PANTHER PTHR26402 13 237 2.9E-123 T 25-04-2016 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 SMART SM00448 13 123 1.7E-39 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 Gene3D G3DSA:3.40.50.2300 12 131 7.8E-40 T 25-04-2016 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 2.1E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 SMART SM00862 159 235 8.3E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 SUPERFAMILY SSF52172 13 192 2.99E-40 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 Pfam PF00072 Response regulator receiver domain 15 124 5.8E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS01850 717a96645d4ebd6eac84f5159ff6b139 237 PANTHER PTHR26402:SF516 13 237 2.9E-123 T 25-04-2016 SMD_RS05635 a732d407accbfef7630b04d6face7c54 110 SUPERFAMILY SSF50022 4 105 3.54E-27 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS05635 a732d407accbfef7630b04d6face7c54 110 Pfam PF00355 Rieske [2Fe-2S] domain 4 95 1.9E-18 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS05635 a732d407accbfef7630b04d6face7c54 110 PANTHER PTHR21496 5 109 4.3E-19 T 25-04-2016 SMD_RS05635 a732d407accbfef7630b04d6face7c54 110 Gene3D G3DSA:2.102.10.10 2 106 2.4E-31 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMD_RS21430 4818fa08f67521a18232056f67645545 473 PANTHER PTHR40254:SF1 1 472 6.4E-88 T 25-04-2016 SMD_RS21430 4818fa08f67521a18232056f67645545 473 Gene3D G3DSA:3.50.50.60 165 254 5.7E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21430 4818fa08f67521a18232056f67645545 473 SUPERFAMILY SSF51905 15 241 1.1E-18 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21430 4818fa08f67521a18232056f67645545 473 Gene3D G3DSA:3.50.50.60 105 164 5.6E-9 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21430 4818fa08f67521a18232056f67645545 473 Gene3D G3DSA:3.50.50.60 16 69 5.6E-9 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21430 4818fa08f67521a18232056f67645545 473 Pfam PF13454 FAD-NAD(P)-binding 19 170 1.7E-32 T 25-04-2016 SMD_RS21430 4818fa08f67521a18232056f67645545 473 PANTHER PTHR40254 1 472 6.4E-88 T 25-04-2016 SMD_RS21430 4818fa08f67521a18232056f67645545 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.2E-8 T 25-04-2016 SMD_RS21430 4818fa08f67521a18232056f67645545 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 205 223 1.2E-8 T 25-04-2016 SMD_RS21430 4818fa08f67521a18232056f67645545 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 1.2E-8 T 25-04-2016 SMD_RS13830 d82f43acf92aa689d64183f15cb74041 412 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 339 1.4E-50 T 25-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMD_RS13830 d82f43acf92aa689d64183f15cb74041 412 Gene3D G3DSA:3.20.20.70 2 340 1.4E-108 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS13830 d82f43acf92aa689d64183f15cb74041 412 PANTHER PTHR22893 1 349 7.3E-146 T 25-04-2016 SMD_RS13830 d82f43acf92aa689d64183f15cb74041 412 SUPERFAMILY SSF51395 3 340 7.94E-99 T 25-04-2016 SMD_RS13830 d82f43acf92aa689d64183f15cb74041 412 PANTHER PTHR22893:SF6 1 349 7.3E-146 T 25-04-2016 SMD_RS13165 8e0d356018d83e9fd83a061b7473bd65 318 Pfam PF00482 Type II secretion system (T2SS), protein F 151 275 4.1E-13 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS13165 8e0d356018d83e9fd83a061b7473bd65 318 PANTHER PTHR35007 143 314 1.6E-23 T 25-04-2016 SMD_RS13165 8e0d356018d83e9fd83a061b7473bd65 318 PANTHER PTHR35007:SF1 143 314 1.6E-23 T 25-04-2016 SMD_RS15210 4801bee62e0b44563c8adf305defe9cb 183 Pfam PF08477 Ras of Complex, Roc, domain of DAPkinase 7 122 1.4E-6 T 25-04-2016 IPR013684 Mitochondrial Rho-like GO:0005525|GO:0007264 SMD_RS15210 4801bee62e0b44563c8adf305defe9cb 183 PANTHER PTHR11711:SF117 7 122 1.9E-21 T 25-04-2016 SMD_RS15210 4801bee62e0b44563c8adf305defe9cb 183 PANTHER PTHR11711 7 122 1.9E-21 T 25-04-2016 SMD_RS15210 4801bee62e0b44563c8adf305defe9cb 183 Gene3D G3DSA:3.40.50.300 4 127 5.2E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS15210 4801bee62e0b44563c8adf305defe9cb 183 SUPERFAMILY SSF52540 4 153 2.81E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.3E-113 T 25-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 PANTHER PTHR30435:SF19 1 261 1.9E-131 T 25-04-2016 SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 SUPERFAMILY SSF117143 93 222 5.36E-36 T 25-04-2016 SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 5.2E-48 T 25-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 1.0E-33 T 25-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 PANTHER PTHR30435 1 261 1.9E-131 T 25-04-2016 SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 25-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 Pfam PF00460 Flagella basal body rod protein 5 35 2.4E-12 T 25-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMD_RS10940 623c4ae31063adb755fcdf46c6ae9ec1 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 1.0E-25 T 25-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMD_RS07215 7c84dcd1a844f9b8985f5320e6e6d66b 251 Pfam PF09836 Putative DNA-binding domain 11 96 4.1E-27 T 25-04-2016 IPR018640 Putative DNA-binding domain, bacteria SMD_RS05475 eda23105598c03861e067f5264809125 76 SUPERFAMILY SSF82657 3 74 1.28E-22 T 25-04-2016 IPR002634 BolA protein SMD_RS05475 eda23105598c03861e067f5264809125 76 PANTHER PTHR12735 26 74 8.3E-15 T 25-04-2016 SMD_RS05475 eda23105598c03861e067f5264809125 76 Gene3D G3DSA:3.30.300.90 3 74 6.2E-23 T 25-04-2016 IPR002634 BolA protein SMD_RS05475 eda23105598c03861e067f5264809125 76 Pfam PF01722 BolA-like protein 23 74 1.1E-17 T 25-04-2016 IPR002634 BolA protein SMD_RS05475 eda23105598c03861e067f5264809125 76 PIRSF PIRSF003113 2 76 1.1E-20 T 25-04-2016 IPR002634 BolA protein SMD_RS04895 6c0ae409cb1efa62a1d07b2ea8252fec 820 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 181 388 6.5E-15 T 25-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 SMD_RS04895 6c0ae409cb1efa62a1d07b2ea8252fec 820 Gene3D G3DSA:3.40.50.300 633 718 4.6E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04895 6c0ae409cb1efa62a1d07b2ea8252fec 820 Gene3D G3DSA:3.40.50.300 419 515 4.6E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04895 6c0ae409cb1efa62a1d07b2ea8252fec 820 Gene3D G3DSA:3.40.50.300 590 598 4.6E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04895 6c0ae409cb1efa62a1d07b2ea8252fec 820 SMART SM00382 440 704 5.3E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS04895 6c0ae409cb1efa62a1d07b2ea8252fec 820 SUPERFAMILY SSF52540 397 738 1.41E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS19615 6367841c559c4284afb473934315c6ec 352 SUPERFAMILY SSF53756 9 319 8.63E-29 T 25-04-2016 SMD_RS19615 6367841c559c4284afb473934315c6ec 352 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 129 256 8.8E-7 T 25-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 SMD_RS19615 6367841c559c4284afb473934315c6ec 352 PIRSF PIRSF028458 1 352 2.0E-160 T 25-04-2016 IPR016886 Predicted glycerophosphotransferase UCP028458 SMD_RS19615 6367841c559c4284afb473934315c6ec 352 Gene3D G3DSA:3.40.50.2000 224 314 8.8E-4 T 25-04-2016 SMD_RS05685 58fc1ebf80a5504a991b3424d08c663d 198 Pfam PF07273 Protein of unknown function (DUF1439) 39 161 6.8E-8 T 25-04-2016 IPR010835 Protein of unknown function DUF1439 SMD_RS06785 9aadb720fc7e8aa46730036d0d1d55d4 73 PANTHER PTHR32319 7 70 6.7E-24 T 25-04-2016 SMD_RS06785 9aadb720fc7e8aa46730036d0d1d55d4 73 SUPERFAMILY SSF55174 2 69 7.2E-21 T 25-04-2016 SMD_RS06785 9aadb720fc7e8aa46730036d0d1d55d4 73 Pfam PF13275 S4 domain 7 69 5.3E-27 T 25-04-2016 SMD_RS06785 9aadb720fc7e8aa46730036d0d1d55d4 73 Gene3D G3DSA:3.10.290.10 1 70 4.8E-30 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS06785 9aadb720fc7e8aa46730036d0d1d55d4 73 PANTHER PTHR32319:SF3 7 70 6.7E-24 T 25-04-2016 SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.6E-36 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.6E-36 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.6E-36 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.6E-36 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.6E-36 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.6E-36 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.1E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.1E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.1E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 Gene3D G3DSA:3.40.50.720 3 254 7.5E-90 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 SUPERFAMILY SSF51735 9 255 2.68E-83 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 8.0E-63 T 25-04-2016 SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PANTHER PTHR24322 161 193 3.2E-57 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS19695 c0b3f4f38879d5e711ec5cef01ec166c 258 PANTHER PTHR24322 15 145 3.2E-57 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01115 156abbfe23d8c3650f554ed1ac0c41c5 551 PANTHER PTHR10566 4 546 7.4E-232 T 25-04-2016 SMD_RS01115 156abbfe23d8c3650f554ed1ac0c41c5 551 PANTHER PTHR10566:SF79 4 546 7.4E-232 T 25-04-2016 SMD_RS01115 156abbfe23d8c3650f554ed1ac0c41c5 551 SUPERFAMILY SSF56112 92 155 3.88E-37 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS01115 156abbfe23d8c3650f554ed1ac0c41c5 551 SUPERFAMILY SSF56112 190 432 3.88E-37 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS01115 156abbfe23d8c3650f554ed1ac0c41c5 551 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 444 1.7E-182 T 25-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SMD_RS01115 156abbfe23d8c3650f554ed1ac0c41c5 551 Pfam PF03109 ABC1 family 110 227 6.4E-35 T 25-04-2016 IPR004147 UbiB domain SMD_RS10565 40c7befaef02db7267ed3454edde6538 286 Gene3D G3DSA:2.40.50.40 179 243 2.3E-11 T 25-04-2016 SMD_RS10565 40c7befaef02db7267ed3454edde6538 286 PIRSF PIRSF031767 2 286 1.6E-81 T 25-04-2016 IPR012379 LytTR MHYE transcriptional regulator, putative SMD_RS10565 40c7befaef02db7267ed3454edde6538 286 SMART SM00850 187 284 2.3E-30 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS10565 40c7befaef02db7267ed3454edde6538 286 PANTHER PTHR37299:SF1 2 284 4.4E-55 T 25-04-2016 SMD_RS10565 40c7befaef02db7267ed3454edde6538 286 Pfam PF04397 LytTr DNA-binding domain 189 283 2.1E-21 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMD_RS10565 40c7befaef02db7267ed3454edde6538 286 PANTHER PTHR37299 2 284 4.4E-55 T 25-04-2016 SMD_RS02865 4b56665206eb93a29744ca8b2b644a02 375 PANTHER PTHR30486 1 374 5.5E-166 T 25-04-2016 SMD_RS02865 4b56665206eb93a29744ca8b2b644a02 375 Pfam PF00437 Type II/IV secretion system protein 10 269 8.8E-37 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMD_RS02865 4b56665206eb93a29744ca8b2b644a02 375 SUPERFAMILY SSF52540 7 337 7.7E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02865 4b56665206eb93a29744ca8b2b644a02 375 Gene3D G3DSA:3.40.50.300 102 340 1.7E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS02865 4b56665206eb93a29744ca8b2b644a02 375 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 341 1.1E-132 T 25-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SMD_RS02865 4b56665206eb93a29744ca8b2b644a02 375 PANTHER PTHR30486:SF3 1 374 5.5E-166 T 25-04-2016 SMD_RS14975 90d7fe3fcf0c0c89811ef9869ebb17ef 150 SUPERFAMILY SSF82649 15 145 7.85E-42 T 25-04-2016 SMD_RS14975 90d7fe3fcf0c0c89811ef9869ebb17ef 150 PANTHER PTHR12735:SF26 1 146 5.9E-57 T 25-04-2016 SMD_RS14975 90d7fe3fcf0c0c89811ef9869ebb17ef 150 PANTHER PTHR12735 1 146 5.9E-57 T 25-04-2016 SMD_RS14975 90d7fe3fcf0c0c89811ef9869ebb17ef 150 Pfam PF02657 Fe-S metabolism associated domain 21 139 3.2E-42 T 25-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 SMD_RS14975 90d7fe3fcf0c0c89811ef9869ebb17ef 150 Gene3D G3DSA:3.90.1010.10 10 145 1.3E-49 T 25-04-2016 SMD_RS11825 cdadb168387fb9d28bec46ebc8c77c86 352 Pfam PF09084 NMT1/THI5 like 47 267 6.3E-22 T 25-04-2016 IPR015168 SsuA/THI5-like SMD_RS11825 cdadb168387fb9d28bec46ebc8c77c86 352 SUPERFAMILY SSF53850 38 279 1.38E-32 T 25-04-2016 SMD_RS11825 cdadb168387fb9d28bec46ebc8c77c86 352 Gene3D G3DSA:3.40.190.10 140 256 2.0E-11 T 25-04-2016 SMD_RS11825 cdadb168387fb9d28bec46ebc8c77c86 352 PANTHER PTHR30024:SF8 51 299 3.2E-33 T 25-04-2016 SMD_RS11825 cdadb168387fb9d28bec46ebc8c77c86 352 PANTHER PTHR30024 51 299 3.2E-33 T 25-04-2016 SMD_RS00940 95701494c5f7eeb8662bb299c16257f1 232 Pfam PF13795 HupE / UreJ protein 49 200 1.4E-53 T 25-04-2016 IPR032809 Putative HupE/UreJ protein SMD_RS20965 d3810309a457d9e65d6e6ea167c45ee8 392 SUPERFAMILY SSF56059 1 169 6.0E-79 T 25-04-2016 SMD_RS20965 d3810309a457d9e65d6e6ea167c45ee8 392 SUPERFAMILY SSF56059 266 380 6.0E-79 T 25-04-2016 SMD_RS20965 d3810309a457d9e65d6e6ea167c45ee8 392 PANTHER PTHR30094 16 386 2.8E-129 T 25-04-2016 SMD_RS20965 d3810309a457d9e65d6e6ea167c45ee8 392 PANTHER PTHR30094:SF5 16 386 2.8E-129 T 25-04-2016 SMD_RS20965 d3810309a457d9e65d6e6ea167c45ee8 392 SUPERFAMILY SSF52440 173 276 1.93E-32 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMD_RS20965 d3810309a457d9e65d6e6ea167c45ee8 392 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 382 4.3E-145 T 25-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SMD_RS04855 10c858cb37e905a6c56c4ad42b486c3b 111 Gene3D G3DSA:3.30.70.900 10 105 7.7E-18 T 25-04-2016 SMD_RS04855 10c858cb37e905a6c56c4ad42b486c3b 111 SUPERFAMILY SSF54909 21 107 4.95E-16 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS04855 10c858cb37e905a6c56c4ad42b486c3b 111 Pfam PF03992 Antibiotic biosynthesis monooxygenase 20 92 9.5E-13 T 25-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 PRINTS PR01650 Bacterial translocase SecE signature 77 97 2.9E-16 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 PRINTS PR01650 Bacterial translocase SecE signature 101 121 2.9E-16 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 PRINTS PR01650 Bacterial translocase SecE signature 56 77 2.9E-16 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 PANTHER PTHR33910 11 137 5.2E-21 T 25-04-2016 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 82 134 5.8E-19 T 25-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 83 111 - T 25-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 Gene3D G3DSA:1.20.5.1030 77 135 3.8E-23 T 25-04-2016 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 82 135 1.4E-20 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 PANTHER PTHR33910:SF1 11 137 5.2E-21 T 25-04-2016 SMD_RS04105 e389b0d4c0a76a71fdeff17b3bfb96ff 137 Hamap MF_00422 Protein translocase subunit SecE [secE]. 75 133 11.79 T 25-04-2016 IPR022943 Preprotein translocase subunit SecE SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 1.3E-13 T 25-04-2016 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 1.3E-13 T 25-04-2016 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 267 282 1.3E-13 T 25-04-2016 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 Gene3D G3DSA:3.50.50.60 26 165 4.2E-22 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 Gene3D G3DSA:3.30.9.10 166 301 1.1E-17 T 25-04-2016 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 SUPERFAMILY SSF51905 264 349 4.58E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 SUPERFAMILY SSF51905 9 170 4.58E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 PANTHER PTHR10617 9 318 4.1E-28 T 25-04-2016 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 61 1.4E-6 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 Gene3D G3DSA:3.50.50.60 302 320 4.6E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 Gene3D G3DSA:3.50.50.60 10 25 4.6E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS08260 488a2aff975c1850f5aa5fed97fabf17 368 Pfam PF01494 FAD binding domain 107 312 1.1E-9 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS20000 45e508f81dd173e1e0785daff2e159af 127 PIRSF PIRSF018634 2 125 1.1E-36 T 25-04-2016 IPR009387 Toxin HigB-2 SMD_RS20000 45e508f81dd173e1e0785daff2e159af 127 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 3 121 5.5E-40 T 25-04-2016 IPR009387 Toxin HigB-2 SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 SUPERFAMILY SSF53335 188 298 1.96E-14 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 Gene3D G3DSA:3.40.50.150 187 282 9.9E-16 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 PIRSF PIRSF028774 9 354 1.8E-150 T 25-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 8 354 74.566 T 25-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 Pfam PF01728 FtsJ-like methyltransferase 189 280 6.6E-7 T 25-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 PANTHER PTHR37524:SF2 11 351 2.5E-155 T 25-04-2016 SMD_RS03800 ac766c5ab8fed1319c4864cad69ac63f 355 PANTHER PTHR37524 11 351 2.5E-155 T 25-04-2016 SMD_RS03340 89a40e6ac5489a835b4c31cb2472d8a4 159 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 22 153 22.55 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMD_RS03340 89a40e6ac5489a835b4c31cb2472d8a4 159 SUPERFAMILY SSF48013 22 153 1.15E-39 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMD_RS03340 89a40e6ac5489a835b4c31cb2472d8a4 159 PANTHER PTHR11078 15 157 2.3E-45 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMD_RS03340 89a40e6ac5489a835b4c31cb2472d8a4 159 Gene3D G3DSA:1.10.940.10 24 154 1.6E-40 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMD_RS03340 89a40e6ac5489a835b4c31cb2472d8a4 159 Pfam PF01029 NusB family 26 149 3.1E-31 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMD_RS03340 89a40e6ac5489a835b4c31cb2472d8a4 159 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 24 150 7.7E-41 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMD_RS02455 e0ce747ada64815b5a3d9df4f0e84ff4 392 PANTHER PTHR22935 21 391 1.6E-71 T 25-04-2016 SMD_RS02455 e0ce747ada64815b5a3d9df4f0e84ff4 392 PANTHER PTHR22935:SF77 21 391 1.6E-71 T 25-04-2016 SMD_RS02455 e0ce747ada64815b5a3d9df4f0e84ff4 392 Pfam PF00144 Beta-lactamase 26 380 6.7E-63 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS02455 e0ce747ada64815b5a3d9df4f0e84ff4 392 Gene3D G3DSA:3.40.710.10 11 385 1.8E-78 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS02455 e0ce747ada64815b5a3d9df4f0e84ff4 392 SUPERFAMILY SSF56601 17 385 1.13E-82 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 Gene3D G3DSA:3.40.190.10 96 180 9.9E-27 T 25-04-2016 SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 Gene3D G3DSA:3.40.190.10 181 266 3.3E-19 T 25-04-2016 SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 PANTHER PTHR30537 1 296 5.7E-95 T 25-04-2016 SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 Pfam PF03466 LysR substrate binding domain 92 296 5.7E-45 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 SUPERFAMILY SSF53850 94 300 1.12E-46 T 25-04-2016 SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.7E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 SUPERFAMILY SSF46785 8 116 6.93E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS09855 1be0e485021d928c30ed8c42c719854c 307 Gene3D G3DSA:1.10.10.10 9 89 7.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19460 4338050c5b08fb45ed894a3579ac9b0b 74 Pfam PF13986 Domain of unknown function (DUF4224) 6 50 4.3E-16 T 25-04-2016 IPR025319 Domain of unknown function DUF4224 SMD_RS06485 44cf468b20cb77308b97ff2a9ce9c256 130 Pfam PF01337 Barstar (barnase inhibitor) 7 75 8.9E-5 T 25-04-2016 IPR000468 Barstar (barnase inhibitor) SMD_RS06485 44cf468b20cb77308b97ff2a9ce9c256 130 Gene3D G3DSA:3.30.370.10 5 75 1.4E-5 T 25-04-2016 IPR000468 Barstar (barnase inhibitor) SMD_RS18765 590827da901f74f77ceedde9f355a24a 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 1.4E-30 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS18765 590827da901f74f77ceedde9f355a24a 161 SUPERFAMILY SSF55083 1 150 3.53E-40 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS18765 590827da901f74f77ceedde9f355a24a 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 1.2E-26 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS18765 590827da901f74f77ceedde9f355a24a 161 PANTHER PTHR20941 1 154 3.0E-52 T 25-04-2016 SMD_RS18765 590827da901f74f77ceedde9f355a24a 161 Gene3D G3DSA:3.30.70.560 3 150 3.2E-42 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 PANTHER PTHR34039:SF1 10 130 2.0E-40 T 25-04-2016 SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 Gene3D G3DSA:3.40.1350.10 22 129 2.3E-35 T 25-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 PANTHER PTHR34039 10 130 2.0E-40 T 25-04-2016 SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 SUPERFAMILY SSF52980 16 115 1.61E-15 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 14 125 21.881 T 25-04-2016 IPR003509 Uncharacterised protein family UPF0102 SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 Pfam PF02021 Uncharacterised protein family UPF0102 22 111 1.0E-23 T 25-04-2016 IPR003509 Uncharacterised protein family UPF0102 SMD_RS03390 a34eefcadaf94d7175c8acb10524c4bd 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 15 126 7.5E-30 T 25-04-2016 IPR003509 Uncharacterised protein family UPF0102 SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 Hamap MF_00556 Bacteriohemerythrin. 3 125 23.288 T 25-04-2016 IPR023504 Bacteriohemerythrin-like protein SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 126 2.5E-37 T 25-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 25-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 123 1.6E-13 T 25-04-2016 IPR012312 Haemerythrin-like SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 SUPERFAMILY SSF47188 1 126 1.96E-34 T 25-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 Gene3D G3DSA:1.20.120.50 1 126 1.7E-36 T 25-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMD_RS07350 1b53d6aa2b3ff892509e224cd2de1c16 153 PANTHER PTHR37164 2 142 8.7E-47 T 25-04-2016 SMD_RS01485 cee5bbe960c3081c13d904e2ecc893fc 257 Pfam PF00916 Sulfate permease family 2 116 2.5E-18 T 25-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SMD_RS01485 cee5bbe960c3081c13d904e2ecc893fc 257 SUPERFAMILY SSF52091 161 251 3.34E-11 T 25-04-2016 IPR002645 STAS domain SMD_RS01485 cee5bbe960c3081c13d904e2ecc893fc 257 PANTHER PTHR11814:SF76 1 251 3.5E-116 T 25-04-2016 SMD_RS01485 cee5bbe960c3081c13d904e2ecc893fc 257 PANTHER PTHR11814 1 251 3.5E-116 T 25-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SMD_RS01485 cee5bbe960c3081c13d904e2ecc893fc 257 Gene3D G3DSA:3.30.750.24 163 251 5.9E-7 T 25-04-2016 IPR002645 STAS domain SMD_RS14690 015a401656dd1f82e28d45151887d937 138 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 41 118 5.1E-19 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS14690 015a401656dd1f82e28d45151887d937 138 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 43 119 2.2E-16 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS14690 015a401656dd1f82e28d45151887d937 138 Gene3D G3DSA:3.30.1150.10 35 119 6.5E-12 T 25-04-2016 SMD_RS14690 015a401656dd1f82e28d45151887d937 138 SUPERFAMILY SSF74653 37 117 1.7E-18 T 25-04-2016 SMD_RS14690 015a401656dd1f82e28d45151887d937 138 PANTHER PTHR33446 41 130 1.2E-17 T 25-04-2016 SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 PANTHER PTHR23501 1 499 2.0E-149 T 25-04-2016 SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 Pfam PF07690 Major Facilitator Superfamily 26 416 6.2E-51 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 Gene3D G3DSA:1.20.1250.20 16 205 2.9E-30 T 25-04-2016 SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 PANTHER PTHR23501:SF65 1 499 2.0E-149 T 25-04-2016 SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 SUPERFAMILY SSF103473 466 499 1.83E-65 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 SUPERFAMILY SSF103473 11 205 1.83E-65 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 SUPERFAMILY SSF103473 256 426 1.83E-65 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 Gene3D G3DSA:1.20.1250.20 264 427 2.3E-22 T 25-04-2016 SMD_RS12330 a24ff43730638df95057d0ef2afb4cad 510 Gene3D G3DSA:1.20.1250.20 472 498 2.3E-22 T 25-04-2016 SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 PANTHER PTHR30012 21 419 4.1E-166 T 25-04-2016 SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 179 207 - T 25-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 399 418 7.4E-17 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 397 7.4E-17 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 179 207 7.4E-17 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 80 92 7.4E-17 T 25-04-2016 IPR003004 GspF/PilC family SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 Pfam PF00482 Type II secretion system (T2SS), protein F 84 207 1.1E-30 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 Pfam PF00482 Type II secretion system (T2SS), protein F 288 410 7.6E-30 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS17455 bd77d3eba12291d5fa4940016787fb2d 419 PANTHER PTHR30012:SF0 21 419 4.1E-166 T 25-04-2016 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 SUPERFAMILY SSF51735 1 316 1.66E-91 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 PANTHER PTHR10366:SF77 2 318 2.1E-166 T 25-04-2016 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 4.2E-23 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 4.2E-23 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.2E-23 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 4.2E-23 T 25-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 PANTHER PTHR10366 2 318 2.1E-166 T 25-04-2016 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 Gene3D G3DSA:3.40.50.720 1 181 2.2E-54 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 1.9E-60 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMD_RS21510 52e614c3d95e2ad07f70541630478022 321 Gene3D G3DSA:3.90.25.10 182 316 9.9E-27 T 25-04-2016 SMD_RS21920 9e557ff110dc2102ab81319c75650af8 331 Gene3D G3DSA:3.20.20.100 1 322 4.7E-114 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21920 9e557ff110dc2102ab81319c75650af8 331 PANTHER PTHR11732:SF225 1 331 3.9E-165 T 25-04-2016 SMD_RS21920 9e557ff110dc2102ab81319c75650af8 331 Pfam PF00248 Aldo/keto reductase family 16 309 2.0E-74 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21920 9e557ff110dc2102ab81319c75650af8 331 SUPERFAMILY SSF51430 1 311 3.27E-99 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMD_RS21920 9e557ff110dc2102ab81319c75650af8 331 PANTHER PTHR11732 1 331 3.9E-165 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMD_RS15830 115129b4a34d50bd72fedc568d0873fb 123 Pfam PF09685 Domain of unknown function (DUF4870) 20 122 1.6E-33 T 25-04-2016 IPR019109 Protein of unknown function DUF4870 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 Gene3D G3DSA:1.10.260.40 11 63 7.7E-23 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 SMART SM00354 10 80 2.8E-26 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 PANTHER PTHR30146 10 338 5.6E-162 T 25-04-2016 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 2.2E-15 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 Gene3D G3DSA:3.40.50.2300 182 317 4.3E-50 T 25-04-2016 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 Gene3D G3DSA:3.40.50.2300 64 181 7.3E-38 T 25-04-2016 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 SUPERFAMILY SSF47413 11 69 2.65E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 SUPERFAMILY SSF53822 70 342 1.26E-70 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 2.6E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 2.6E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 Pfam PF13377 Periplasmic binding protein-like domain 177 339 1.1E-36 T 25-04-2016 SMD_RS14745 88628d971430844b367d9d4c4b2056bd 345 PANTHER PTHR30146:SF55 10 338 5.6E-162 T 25-04-2016 SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PANTHER PTHR24322 40 164 6.0E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PANTHER PTHR24322 180 215 6.0E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 3.3E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 37 54 3.3E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 170 3.3E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 122 3.3E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 3.3E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 239 259 3.3E-31 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 Gene3D G3DSA:3.40.50.720 30 277 4.7E-70 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 44 274 8.9E-50 T 25-04-2016 SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 167 195 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 3.3E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 3.3E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 3.3E-7 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PANTHER PTHR24322:SF559 40 164 6.0E-35 T 25-04-2016 SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 PANTHER PTHR24322:SF559 180 215 6.0E-35 T 25-04-2016 SMD_RS10120 f6e17615792383f0dfdfb9ec6eff51f7 279 SUPERFAMILY SSF51735 35 278 1.33E-69 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS04125 a01638116053bbe8d6dad0b74a6001e2 198 Pfam PF00466 Ribosomal protein L10 6 101 3.5E-21 T 25-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SMD_RS04125 a01638116053bbe8d6dad0b74a6001e2 198 PANTHER PTHR11560 1 160 3.1E-42 T 25-04-2016 SMD_RS04125 a01638116053bbe8d6dad0b74a6001e2 198 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.017 T 25-04-2016 IPR022973 Ribosomal protein L10 SMD_RS04125 a01638116053bbe8d6dad0b74a6001e2 198 SUPERFAMILY SSF160369 4 160 3.27E-42 T 25-04-2016 SMD_RS07695 b5df78273a26b11d6a3685996cbfb76a 208 PANTHER PTHR14269:SF13 3 190 3.7E-68 T 25-04-2016 SMD_RS07695 b5df78273a26b11d6a3685996cbfb76a 208 PANTHER PTHR14269 3 190 3.7E-68 T 25-04-2016 SMD_RS07695 b5df78273a26b11d6a3685996cbfb76a 208 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 2.7E-17 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS07695 b5df78273a26b11d6a3685996cbfb76a 208 PIRSF PIRSF000847 1 199 1.0E-43 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMD_RS07695 b5df78273a26b11d6a3685996cbfb76a 208 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 1.1E-53 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMD_RS07695 b5df78273a26b11d6a3685996cbfb76a 208 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS19015 fbfa666c5378ab67e7aca7f93d0d4273 229 SUPERFAMILY SSF161098 20 219 1.27E-41 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS19015 fbfa666c5378ab67e7aca7f93d0d4273 229 Gene3D G3DSA:1.10.3720.10 19 225 1.7E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS19015 fbfa666c5378ab67e7aca7f93d0d4273 229 PANTHER PTHR30450 3 229 1.9E-114 T 25-04-2016 SMD_RS19015 fbfa666c5378ab67e7aca7f93d0d4273 229 PANTHER PTHR30450:SF1 3 229 1.9E-114 T 25-04-2016 SMD_RS19015 fbfa666c5378ab67e7aca7f93d0d4273 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 225 6.4E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07590 c95d27f76dd4ac3942882966fa80fb2e 1250 Pfam PF05567 Neisseria PilC beta-propeller domain 717 1079 3.2E-36 T 25-04-2016 IPR008707 PilC beta-propeller domain SMD_RS19715 193a15acf28eb3081ad8d6a1cbaf145d 193 Pfam PF11304 Protein of unknown function (DUF3106) 50 104 4.2E-7 T 25-04-2016 IPR021455 Protein of unknown function DUF3106 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 PANTHER PTHR10617:SF113 9 399 4.0E-99 T 25-04-2016 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 PANTHER PTHR10617 9 399 4.0E-99 T 25-04-2016 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 SUPERFAMILY SSF51905 289 391 2.29E-44 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 SUPERFAMILY SSF51905 9 179 2.29E-44 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 Pfam PF01494 FAD binding domain 10 168 7.0E-20 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 Gene3D G3DSA:3.50.50.60 285 329 1.8E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 Gene3D G3DSA:3.50.50.60 10 187 1.8E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 252 266 2.9E-5 T 25-04-2016 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 2.9E-5 T 25-04-2016 SMD_RS21260 9b88536a9b5906397bfeb1171b926ff3 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.9E-5 T 25-04-2016 SMD_RS16990 f4356e35d7ce5ab5ca6c3bb59c252654 71 Pfam PF05489 Phage Tail Protein X 1 58 2.8E-22 T 25-04-2016 IPR008861 Phage Tail Protein X-like SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 SUPERFAMILY SSF46785 14 101 5.97E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 PANTHER PTHR33154:SF10 15 101 1.2E-23 T 25-04-2016 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 PANTHER PTHR33154 15 101 1.2E-23 T 25-04-2016 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 SMART SM00418 20 98 2.8E-17 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 7.5E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 2.7E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 2.7E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 2.7E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMD_RS10190 ad90c9cc2e12191c37953bb998092625 107 Gene3D G3DSA:1.10.10.10 9 102 8.3E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03500 9e368734258efb473bb95f106ce9acb9 318 Pfam PF01551 Peptidase family M23 206 300 3.3E-32 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS03500 9e368734258efb473bb95f106ce9acb9 318 SUPERFAMILY SSF51261 168 304 1.41E-55 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS03500 9e368734258efb473bb95f106ce9acb9 318 PANTHER PTHR21666 142 306 3.4E-50 T 25-04-2016 SMD_RS03500 9e368734258efb473bb95f106ce9acb9 318 PANTHER PTHR21666:SF214 142 306 3.4E-50 T 25-04-2016 SMD_RS03500 9e368734258efb473bb95f106ce9acb9 318 Gene3D G3DSA:2.70.70.10 169 305 5.1E-49 T 25-04-2016 SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 SMART SM00271 45 108 3.2E-16 T 25-04-2016 IPR001623 DnaJ domain SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 Pfam PF00226 DnaJ domain 46 109 1.1E-12 T 25-04-2016 IPR001623 DnaJ domain SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 SUPERFAMILY SSF46565 38 109 3.01E-21 T 25-04-2016 IPR001623 DnaJ domain SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 PRINTS PR00625 DnaJ domain signature 88 108 7.5E-11 T 25-04-2016 IPR001623 DnaJ domain SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 PRINTS PR00625 DnaJ domain signature 66 81 7.5E-11 T 25-04-2016 IPR001623 DnaJ domain SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 PRINTS PR00625 DnaJ domain signature 48 66 7.5E-11 T 25-04-2016 IPR001623 DnaJ domain SMD_RS20300 bd597871f385fa9fc8acc9e96d0628d8 109 Gene3D G3DSA:1.10.287.110 46 109 4.2E-17 T 25-04-2016 IPR001623 DnaJ domain SMD_RS18635 5389d911bb065445f57d3e941b122f27 289 SUPERFAMILY SSF103481 45 133 3.79E-6 T 25-04-2016 SMD_RS18635 5389d911bb065445f57d3e941b122f27 289 PANTHER PTHR22911:SF37 5 282 1.9E-71 T 25-04-2016 SMD_RS18635 5389d911bb065445f57d3e941b122f27 289 SUPERFAMILY SSF103481 185 276 8.5E-7 T 25-04-2016 SMD_RS18635 5389d911bb065445f57d3e941b122f27 289 PANTHER PTHR22911 5 282 1.9E-71 T 25-04-2016 SMD_RS18635 5389d911bb065445f57d3e941b122f27 289 Pfam PF00892 EamA-like transporter family 146 275 1.7E-17 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 320 2.2E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 SMART SM00388 256 322 2.1E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 SUPERFAMILY SSF55874 312 475 1.31E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PANTHER PTHR24423:SF354 1 15 7.7E-113 T 25-04-2016 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PANTHER PTHR24423:SF354 196 478 7.7E-113 T 25-04-2016 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 SUPERFAMILY SSF47384 239 322 8.04E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PANTHER PTHR24423 1 15 7.7E-113 T 25-04-2016 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PANTHER PTHR24423 196 478 7.7E-113 T 25-04-2016 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 474 8.9E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 2.1E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 2.1E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 2.1E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 SMART SM00387 366 477 2.6E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 16 474 2.2E-141 T 25-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 Gene3D G3DSA:1.10.287.130 246 309 1.6E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 Gene3D G3DSA:3.30.565.10 310 476 6.2E-38 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 Pfam PF00672 HAMP domain 182 251 1.5E-9 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS07810 90462af94f8c3e338acc65bfba14f5d3 478 SMART SM00304 202 255 6.1E-5 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 Gene3D G3DSA:1.10.10.60 228 273 2.6E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 PANTHER PTHR11019:SF119 180 274 8.5E-19 T 25-04-2016 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 PANTHER PTHR11019 180 274 8.5E-19 T 25-04-2016 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 SUPERFAMILY SSF46689 229 273 8.06E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 Pfam PF12833 Helix-turn-helix domain 201 273 1.3E-12 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS18600 5a2818d60ba914894bac18d82bf72898 274 SMART SM00342 193 274 5.2E-9 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS11310 4f6a3a9bdcf6d192ea33f4650aa5620b 255 PANTHER PTHR33973 1 248 2.6E-71 T 25-04-2016 SMD_RS11310 4f6a3a9bdcf6d192ea33f4650aa5620b 255 Pfam PF07103 Protein of unknown function (DUF1365) 6 249 1.8E-72 T 25-04-2016 IPR010775 Protein of unknown function DUF1365 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 Pfam PF00128 Alpha amylase, catalytic domain 84 416 2.4E-42 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 Gene3D G3DSA:3.20.20.80 33 459 4.1E-70 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 SMART SM00642 40 453 4.9E-29 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 PANTHER PTHR10357:SF163 7 54 4.6E-180 T 25-04-2016 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 PANTHER PTHR10357:SF163 81 558 4.6E-180 T 25-04-2016 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 PANTHER PTHR10357 7 54 4.6E-180 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 PANTHER PTHR10357 81 558 4.6E-180 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 Gene3D G3DSA:2.60.40.1180 460 541 9.0E-6 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMD_RS05785 65db7a1230c2ff0aa1508e1a40d04c6c 571 SUPERFAMILY SSF51445 30 462 3.55E-68 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMD_RS08725 cef4e846d7c83d1133b5a5b2ef2ef047 498 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 203 210 - T 25-04-2016 IPR018202 Serine carboxypeptidase, serine active site SMD_RS08725 cef4e846d7c83d1133b5a5b2ef2ef047 498 Gene3D G3DSA:3.40.50.1820 51 462 1.6E-55 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08725 cef4e846d7c83d1133b5a5b2ef2ef047 498 PANTHER PTHR11802 92 253 2.4E-20 T 25-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 SMD_RS08725 cef4e846d7c83d1133b5a5b2ef2ef047 498 SUPERFAMILY SSF53474 51 485 8.99E-72 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08725 cef4e846d7c83d1133b5a5b2ef2ef047 498 Pfam PF00450 Serine carboxypeptidase 91 461 9.8E-19 T 25-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 SMD_RS06725 d28f16bf8294047522aa83bffb74e5c6 557 SUPERFAMILY SSF103473 507 535 3.4E-16 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06725 d28f16bf8294047522aa83bffb74e5c6 557 SUPERFAMILY SSF103473 275 447 3.4E-16 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06725 d28f16bf8294047522aa83bffb74e5c6 557 SUPERFAMILY SSF103473 38 225 3.4E-16 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS06725 d28f16bf8294047522aa83bffb74e5c6 557 PANTHER PTHR23501 21 542 4.5E-16 T 25-04-2016 SMD_RS06725 d28f16bf8294047522aa83bffb74e5c6 557 Pfam PF07690 Major Facilitator Superfamily 43 434 2.4E-13 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS06725 d28f16bf8294047522aa83bffb74e5c6 557 Gene3D G3DSA:1.20.1250.20 33 211 2.9E-12 T 25-04-2016 SMD_RS18835 61faf4a1d9823481bbf80f66cd28e99a 357 Gene3D G3DSA:2.40.128.140 29 354 3.8E-106 T 25-04-2016 SMD_RS18835 61faf4a1d9823481bbf80f66cd28e99a 357 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 48 355 6.2E-92 T 25-04-2016 IPR018707 Protein of unknown function DUF2219 SMD_RS04540 2515a25b78702814b3bc889637eb432f 250 Pfam PF01925 Sulfite exporter TauE/SafE 9 237 8.4E-28 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMD_RS03355 b3e20e5f2600614481a3e1cf97c72048 123 PANTHER PTHR34980 11 116 3.8E-20 T 25-04-2016 SMD_RS03355 b3e20e5f2600614481a3e1cf97c72048 123 Pfam PF05656 Protein of unknown function (DUF805) 11 118 1.7E-32 T 25-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SMD_RS05540 a486f432742ed502f1c964be59f98076 236 PANTHER PTHR22572 2 115 1.7E-40 T 25-04-2016 SMD_RS05540 a486f432742ed502f1c964be59f98076 236 SUPERFAMILY SSF53448 1 232 1.69E-51 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS05540 a486f432742ed502f1c964be59f98076 236 Pfam PF00483 Nucleotidyl transferase 2 121 3.1E-16 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMD_RS05540 a486f432742ed502f1c964be59f98076 236 Gene3D G3DSA:3.90.550.10 1 233 7.1E-48 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS16470 67682376f91fed39a1321c53322670b8 392 PANTHER PTHR30349:SF21 1 379 3.1E-132 T 25-04-2016 SMD_RS16470 67682376f91fed39a1321c53322670b8 392 Pfam PF04303 PrpF protein 6 390 1.1E-173 T 25-04-2016 IPR007400 PrpF protein SMD_RS16470 67682376f91fed39a1321c53322670b8 392 PANTHER PTHR30349 1 379 3.1E-132 T 25-04-2016 SMD_RS16470 67682376f91fed39a1321c53322670b8 392 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 392 1.9E-224 T 25-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 SMD_RS16470 67682376f91fed39a1321c53322670b8 392 Gene3D G3DSA:3.10.310.10 3 195 5.0E-89 T 25-04-2016 SMD_RS16470 67682376f91fed39a1321c53322670b8 392 SUPERFAMILY SSF54506 188 391 1.41E-75 T 25-04-2016 SMD_RS16470 67682376f91fed39a1321c53322670b8 392 SUPERFAMILY SSF54506 2 181 2.2E-69 T 25-04-2016 SMD_RS16470 67682376f91fed39a1321c53322670b8 392 Gene3D G3DSA:3.10.310.10 196 373 1.2E-78 T 25-04-2016 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 202 221 3.9E-47 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 163 186 3.9E-47 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 98 118 3.9E-47 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 228 247 3.9E-47 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 3.9E-47 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 78 95 3.9E-47 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PANTHER PTHR24322 13 132 7.7E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 PANTHER PTHR24322 148 184 7.7E-41 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 SUPERFAMILY SSF51735 7 250 6.97E-67 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 6.8E-50 T 25-04-2016 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 181 6.2E-5 T 25-04-2016 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 250 1.4E-98 T 25-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SMD_RS12920 67071ab4b02adce7a1df4f6d1597f6aa 252 Gene3D G3DSA:3.40.50.720 5 250 1.2E-68 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS07955 72d4f758996b00d0b4fe222482d09b2d 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 16 119 1.1E-44 T 25-04-2016 IPR021356 Integrating conjugative element protein PFL4702 SMD_RS07955 72d4f758996b00d0b4fe222482d09b2d 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 1.5E-32 T 25-04-2016 IPR021356 Integrating conjugative element protein PFL4702 SMD_RS20055 758d5c913b3b0c0ac98599524c52b709 576 PIRSF PIRSF000719 6 576 6.5E-229 T 25-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SMD_RS20055 758d5c913b3b0c0ac98599524c52b709 576 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 6 576 37.608 T 25-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SMD_RS20055 758d5c913b3b0c0ac98599524c52b709 576 PANTHER PTHR39559 5 576 1.9E-178 T 25-04-2016 SMD_RS20055 758d5c913b3b0c0ac98599524c52b709 576 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 14 569 0.0 T 25-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SMD_RS20055 758d5c913b3b0c0ac98599524c52b709 576 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 14 571 7.8E-207 T 25-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SMD_RS19875 6e5becd1f1206f493a1404cee1ce5ff2 188 SMART SM00974 18 110 4.5E-8 T 25-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 PANTHER PTHR34653 7 121 8.4E-24 T 25-04-2016 SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 10 121 16.254 T 25-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 106 119 4.6E-11 T 25-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 85 101 4.6E-11 T 25-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 50 66 4.6E-11 T 25-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 120 2.8E-27 T 25-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMD_RS10850 ca5a97bcda0aef816408f103078fc439 121 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 49 119 1.1E-17 T 25-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMD_RS03190 2e7e5460e608dd9beac65273ded860e5 237 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 77 192 1.3E-30 T 25-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 SMD_RS12985 2017dbdc042bb60cd781ecfa38d25b4f 111 SUPERFAMILY SSF48452 7 105 4.07E-10 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS12985 2017dbdc042bb60cd781ecfa38d25b4f 111 Gene3D G3DSA:1.25.40.10 4 89 5.1E-11 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS12985 2017dbdc042bb60cd781ecfa38d25b4f 111 Pfam PF14559 Tetratricopeptide repeat 28 76 1.0E-5 T 25-04-2016 SMD_RS12985 2017dbdc042bb60cd781ecfa38d25b4f 111 SMART SM00028 17 50 52.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS12985 2017dbdc042bb60cd781ecfa38d25b4f 111 SMART SM00028 51 84 1.1 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMD_RS03095 d5b58cd920c5f2df69a1c85a30633b86 141 SUPERFAMILY SSF102400 1 140 3.79E-35 T 25-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SMD_RS03095 d5b58cd920c5f2df69a1c85a30633b86 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 3.0E-33 T 25-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SMD_RS03095 d5b58cd920c5f2df69a1c85a30633b86 141 Gene3D G3DSA:3.40.50.10110 1 140 4.9E-38 T 25-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SMD_RS03095 d5b58cd920c5f2df69a1c85a30633b86 141 PANTHER PTHR38767 2 141 2.9E-52 T 25-04-2016 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 SUPERFAMILY SSF54534 169 277 2.29E-26 T 25-04-2016 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 PANTHER PTHR10657 26 448 4.3E-219 T 25-04-2016 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 SUPERFAMILY SSF54534 292 392 2.03E-26 T 25-04-2016 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 Hamap MF_01183 Chaperone SurA [surA]. 8 436 31.23 T 25-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 PANTHER PTHR10657:SF16 26 448 4.3E-219 T 25-04-2016 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 Pfam PF09312 SurA N-terminal domain 32 149 4.1E-42 T 25-04-2016 IPR015391 SurA N-terminal SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 Pfam PF00639 PPIC-type PPIASE domain 182 276 7.1E-17 T 25-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 Pfam PF00639 PPIC-type PPIASE domain 298 389 9.6E-25 T 25-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 SUPERFAMILY SSF109998 32 204 3.85E-41 T 25-04-2016 IPR027304 Trigger factor/SurA domain SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 Gene3D G3DSA:3.10.50.40 291 414 8.7E-33 T 25-04-2016 SMD_RS03760 958f16f65615fcb7a36d4fd1e2d23c84 448 Gene3D G3DSA:3.10.50.40 169 283 1.6E-29 T 25-04-2016 SMD_RS16535 f03971425779296fd99d38ef53fc3e62 79 SUPERFAMILY SSF142921 3 73 2.22E-10 T 25-04-2016 IPR008893 WGR domain SMD_RS16535 f03971425779296fd99d38ef53fc3e62 79 Gene3D G3DSA:2.20.140.10 15 73 2.4E-5 T 25-04-2016 IPR008893 WGR domain SMD_RS16535 f03971425779296fd99d38ef53fc3e62 79 Pfam PF05406 WGR domain 3 73 3.9E-7 T 25-04-2016 IPR008893 WGR domain SMD_RS02835 a77d8dd81709e84e0f9fca7f784c871c 864 SUPERFAMILY SSF52317 660 853 9.04E-11 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMD_RS02835 a77d8dd81709e84e0f9fca7f784c871c 864 Pfam PF00246 Zinc carboxypeptidase 68 238 6.9E-19 T 25-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMD_RS02835 a77d8dd81709e84e0f9fca7f784c871c 864 SMART SM00631 61 346 1.8E-5 T 25-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMD_RS02835 a77d8dd81709e84e0f9fca7f784c871c 864 SUPERFAMILY SSF53187 130 344 4.3E-51 T 25-04-2016 SMD_RS02835 a77d8dd81709e84e0f9fca7f784c871c 864 SUPERFAMILY SSF53187 53 103 4.3E-51 T 25-04-2016 SMD_RS02835 a77d8dd81709e84e0f9fca7f784c871c 864 Gene3D G3DSA:3.40.630.10 55 323 1.1E-31 T 25-04-2016 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 Gene3D G3DSA:3.40.720.10 55 533 7.9E-155 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PANTHER PTHR11596:SF45 470 533 6.6E-202 T 25-04-2016 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PANTHER PTHR11596:SF45 45 452 6.6E-202 T 25-04-2016 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PANTHER PTHR11596 470 533 6.6E-202 T 25-04-2016 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PANTHER PTHR11596 45 452 6.6E-202 T 25-04-2016 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PRINTS PR00113 Alkaline phosphatase signature 68 88 2.8E-39 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PRINTS PR00113 Alkaline phosphatase signature 321 350 2.8E-39 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PRINTS PR00113 Alkaline phosphatase signature 233 243 2.8E-39 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PRINTS PR00113 Alkaline phosphatase signature 170 190 2.8E-39 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 PRINTS PR00113 Alkaline phosphatase signature 124 139 2.8E-39 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 SMART SM00098 69 536 8.4E-140 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 Pfam PF00245 Alkaline phosphatase 68 532 5.8E-120 T 25-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SMD_RS15805 3163d7bd637558cc5a5423b496dc4a06 568 SUPERFAMILY SSF53649 59 533 4.14E-140 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMD_RS03705 2c3e251b8a0b271906d762b8e862f64a 206 PANTHER PTHR34478 1 195 5.1E-96 T 25-04-2016 SMD_RS03705 2c3e251b8a0b271906d762b8e862f64a 206 Pfam PF04011 LemA family 10 192 3.2E-65 T 25-04-2016 IPR007156 LemA SMD_RS03705 2c3e251b8a0b271906d762b8e862f64a 206 PANTHER PTHR34478:SF2 1 195 5.1E-96 T 25-04-2016 SMD_RS03705 2c3e251b8a0b271906d762b8e862f64a 206 Gene3D G3DSA:1.20.1440.20 16 192 8.2E-63 T 25-04-2016 IPR023353 LemA-like domain SMD_RS03705 2c3e251b8a0b271906d762b8e862f64a 206 SUPERFAMILY SSF140478 26 179 3.92E-53 T 25-04-2016 IPR023353 LemA-like domain SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 25-04-2016 IPR033135 ClpP, histidine active site SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 2.6E-105 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 25-04-2016 IPR018215 ClpP, Ser active site SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 Pfam PF00574 Clp protease 19 199 3.3E-87 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 PANTHER PTHR10381 1 205 2.4E-136 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 Gene3D G3DSA:3.90.226.10 10 199 1.7E-88 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 SUPERFAMILY SSF52096 17 200 2.4E-73 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 5.7E-52 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 5.7E-52 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 5.7E-52 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 5.7E-52 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 5.7E-52 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS04595 f30947c35afb581376b565bd10f03b08 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.074 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMD_RS03180 6319cfc66e0823644c4c84125542245a 287 PIRSF PIRSF002786 1 286 2.7E-41 T 25-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SMD_RS03180 6319cfc66e0823644c4c84125542245a 287 Gene3D G3DSA:1.10.40.60 95 192 2.5E-22 T 25-04-2016 SMD_RS03180 6319cfc66e0823644c4c84125542245a 287 Pfam PF03934 Type II secretion system (T2SS), protein K 31 268 6.2E-43 T 25-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SMD_RS03180 6319cfc66e0823644c4c84125542245a 287 SUPERFAMILY SSF158544 95 191 3.14E-22 T 25-04-2016 SMD_RS03180 6319cfc66e0823644c4c84125542245a 287 PANTHER PTHR38831 1 284 5.6E-43 T 25-04-2016 SMD_RS03180 6319cfc66e0823644c4c84125542245a 287 PANTHER PTHR38831:SF1 1 284 5.6E-43 T 25-04-2016 SMD_RS08420 6ee26fcea34ba901c4fde84ef4b13096 108 Gene3D G3DSA:1.10.260.40 1 51 3.8E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS12600 ae3ef1f5757d84f2c744c3b5008a8fb6 391 PANTHER PTHR30570:SF0 10 390 2.6E-51 T 25-04-2016 SMD_RS12600 ae3ef1f5757d84f2c744c3b5008a8fb6 391 Gene3D G3DSA:3.40.190.10 122 320 2.3E-26 T 25-04-2016 SMD_RS12600 ae3ef1f5757d84f2c744c3b5008a8fb6 391 SUPERFAMILY SSF53850 26 390 9.23E-64 T 25-04-2016 SMD_RS12600 ae3ef1f5757d84f2c744c3b5008a8fb6 391 PANTHER PTHR30570 10 390 2.6E-51 T 25-04-2016 SMD_RS12600 ae3ef1f5757d84f2c744c3b5008a8fb6 391 Pfam PF12849 PBP superfamily domain 20 333 1.2E-25 T 25-04-2016 IPR024370 PBP domain SMD_RS01130 6f0cf22fcac815298c59e408b9dcbae7 379 PANTHER PTHR10859 18 343 2.7E-75 T 25-04-2016 SMD_RS01130 6f0cf22fcac815298c59e408b9dcbae7 379 PANTHER PTHR10859:SF95 18 343 2.7E-75 T 25-04-2016 SMD_RS01130 6f0cf22fcac815298c59e408b9dcbae7 379 Gene3D G3DSA:3.90.550.10 35 225 2.0E-29 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS01130 6f0cf22fcac815298c59e408b9dcbae7 379 Pfam PF00535 Glycosyl transferase family 2 34 201 2.5E-27 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS01130 6f0cf22fcac815298c59e408b9dcbae7 379 SUPERFAMILY SSF53448 27 286 2.82E-45 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS22000 26b12b622a463f3dcd9ddd91b62f7517 291 Pfam PF07007 Protein of unknown function (DUF1311) 196 284 1.6E-5 T 25-04-2016 IPR009739 Protein of unknown function DUF1311 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 PANTHER PTHR26402 2 209 1.3E-79 T 25-04-2016 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.1E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.1E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.1E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 SMART SM00448 2 115 9.0E-33 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 PANTHER PTHR26402:SF564 2 209 1.3E-79 T 25-04-2016 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 Pfam PF00072 Response regulator receiver domain 4 115 7.4E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 Gene3D G3DSA:3.40.50.2300 1 156 5.7E-41 T 25-04-2016 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 SUPERFAMILY SSF46894 145 212 3.74E-22 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 SMART SM00421 150 207 1.0E-25 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 Gene3D G3DSA:1.10.10.10 157 212 6.4E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 SUPERFAMILY SSF52172 1 133 1.14E-34 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS06135 06654a2607dd2624a703ea3d00d70306 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.6E-20 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS16900 e3619fcbff04ed076d982857db80e534 154 Pfam PF03245 Bacteriophage Rz lysis protein 33 152 9.1E-6 T 25-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 SMD_RS08215 b59c794265816c576dbae7887dd55ab9 263 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 225 1.1E-88 T 25-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 SMD_RS08215 b59c794265816c576dbae7887dd55ab9 263 Pfam PF08900 Domain of unknown function (DUF1845) 12 222 2.1E-79 T 25-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 SMART SM00387 259 371 3.5E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 Gene3D G3DSA:3.30.565.10 219 369 4.0E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 PANTHER PTHR24423 93 101 2.5E-39 T 25-04-2016 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 PANTHER PTHR24423 146 372 2.5E-39 T 25-04-2016 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 SUPERFAMILY SSF55874 217 370 3.67E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 152 212 2.8E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 SUPERFAMILY SSF47384 146 213 5.49E-13 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 SMART SM00388 150 215 4.9E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 369 2.4E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 Gene3D G3DSA:1.10.287.130 146 211 1.5E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMD_RS11380 72d9465fa30d68e36f7a23a91ef98629 372 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 3 110 2.3E-6 T 25-04-2016 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain SMD_RS05040 d03d7f0e3e78a64e891ee3dc596a3b4c 264 SMART SM00858 48 112 4.9E-9 T 25-04-2016 IPR013974 SAF domain SMD_RS05040 d03d7f0e3e78a64e891ee3dc596a3b4c 264 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 13 227 5.6E-47 T 25-04-2016 IPR017592 Pilus assembly, Flp-type CpaB SMD_RS05040 d03d7f0e3e78a64e891ee3dc596a3b4c 264 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 117 221 3.5E-24 T 25-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain SMD_RS05040 d03d7f0e3e78a64e891ee3dc596a3b4c 264 Pfam PF08666 SAF domain 49 111 5.6E-8 T 25-04-2016 IPR013974 SAF domain SMD_RS02050 c55aed332049cafd3f954417cb506711 72 Pfam PF11137 Protein of unknown function (DUF2909) 8 65 2.8E-20 T 25-04-2016 IPR021313 Protein of unknown function DUF2909 SMD_RS18970 fae118fb794be0b14aab4a7c36c1ce52 224 Pfam PF04340 Protein of unknown function, DUF484 4 223 1.7E-65 T 25-04-2016 IPR007435 Protein of unknown function DUF484 SMD_RS18970 fae118fb794be0b14aab4a7c36c1ce52 224 PANTHER PTHR38765 1 223 2.3E-69 T 25-04-2016 SMD_RS00805 1b233a2cbe14844b90dec344eb90582a 343 PIRSF PIRSF005508 1 343 5.5E-117 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMD_RS00805 1b233a2cbe14844b90dec344eb90582a 343 Pfam PF01758 Sodium Bile acid symporter family 47 242 4.3E-38 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SMD_RS00805 1b233a2cbe14844b90dec344eb90582a 343 PANTHER PTHR10361 1 343 3.8E-119 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SMD_RS00805 1b233a2cbe14844b90dec344eb90582a 343 PANTHER PTHR10361:SF31 1 343 3.8E-119 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMD_RS00805 1b233a2cbe14844b90dec344eb90582a 343 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 329 8.7E-115 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMD_RS21905 d734fc930bfe5bf012be474511457241 209 PANTHER PTHR30086:SF15 4 205 4.6E-44 T 25-04-2016 SMD_RS21905 d734fc930bfe5bf012be474511457241 209 PANTHER PTHR30086 4 205 4.6E-44 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS21905 d734fc930bfe5bf012be474511457241 209 Pfam PF01810 LysE type translocator 18 208 2.0E-37 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS21905 d734fc930bfe5bf012be474511457241 209 PIRSF PIRSF006324 3 209 2.4E-52 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS12885 4235d4a6d0eb854454ed2d2595dc3c2c 602 Pfam PF08019 Domain of unknown function (DUF1705) 57 208 4.6E-42 T 25-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 SMD_RS12885 4235d4a6d0eb854454ed2d2595dc3c2c 602 Gene3D G3DSA:3.40.720.10 384 529 2.4E-8 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMD_RS12885 4235d4a6d0eb854454ed2d2595dc3c2c 602 SUPERFAMILY SSF53649 232 531 2.13E-16 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMD_RS12885 4235d4a6d0eb854454ed2d2595dc3c2c 602 Pfam PF00884 Sulfatase 234 528 1.5E-46 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMD_RS12885 4235d4a6d0eb854454ed2d2595dc3c2c 602 PANTHER PTHR30443:SF0 2 574 4.4E-233 T 25-04-2016 SMD_RS12885 4235d4a6d0eb854454ed2d2595dc3c2c 602 PANTHER PTHR30443 2 574 4.4E-233 T 25-04-2016 SMD_RS19125 920d5c181f8643f75fc42949269f83f8 127 Pfam PF04138 GtrA-like protein 10 126 9.4E-16 T 25-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 SUPERFAMILY SSF56752 8 360 5.36E-114 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 50 363 2.1E-143 T 25-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 PIRSF PIRSF006468 7 364 4.1E-134 T 25-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 Gene3D G3DSA:3.20.10.10 181 350 9.8E-71 T 25-04-2016 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 PANTHER PTHR11825 16 362 1.8E-143 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 ProSitePatterns PS00770 Aminotransferases class-IV signature. 239 269 - T 25-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 Pfam PF01063 Amino-transferase class IV 76 319 3.5E-36 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 Gene3D G3DSA:3.30.470.10 20 180 4.5E-68 T 25-04-2016 SMD_RS03945 0153a63ddc6eab57c5306796101c6b33 364 PANTHER PTHR11825:SF2 16 362 1.8E-143 T 25-04-2016 SMD_RS03540 5eb915e7df8ea8ef912e5d760ea097ce 194 PANTHER PTHR38666:SF1 1 186 1.5E-114 T 25-04-2016 SMD_RS03540 5eb915e7df8ea8ef912e5d760ea097ce 194 PANTHER PTHR38666 1 186 1.5E-114 T 25-04-2016 SMD_RS03540 5eb915e7df8ea8ef912e5d760ea097ce 194 Pfam PF11539 Protein of unknown function (DUF3228) 3 183 1.0E-64 T 25-04-2016 IPR021610 Protein of unknown function DUF3228 SMD_RS00385 96bee16c48acd4b2562e75e00aa599fc 174 PANTHER PTHR13256:SF10 4 154 2.1E-28 T 25-04-2016 SMD_RS00385 96bee16c48acd4b2562e75e00aa599fc 174 PANTHER PTHR13256 4 154 2.1E-28 T 25-04-2016 SMD_RS00385 96bee16c48acd4b2562e75e00aa599fc 174 Gene3D G3DSA:3.40.630.30 3 167 7.0E-37 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS00385 96bee16c48acd4b2562e75e00aa599fc 174 SUPERFAMILY SSF55729 3 153 1.75E-30 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS00385 96bee16c48acd4b2562e75e00aa599fc 174 Pfam PF13302 Acetyltransferase (GNAT) domain 8 149 1.0E-19 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS20635 f483217f5043d79815a796fa29ddd421 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 3.1E-16 T 25-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SMD_RS20635 f483217f5043d79815a796fa29ddd421 110 PANTHER PTHR36835 1 110 1.2E-32 T 25-04-2016 SMD_RS20635 f483217f5043d79815a796fa29ddd421 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 3.2E-35 T 25-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 SUPERFAMILY SSF103473 235 494 3.4E-10 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 PANTHER PTHR11654:SF119 11 226 8.1E-144 T 25-04-2016 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 PANTHER PTHR11654:SF119 276 455 8.1E-144 T 25-04-2016 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 SUPERFAMILY SSF103473 8 214 1.07E-20 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 Gene3D G3DSA:1.20.1250.20 291 493 1.1E-6 T 25-04-2016 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 Gene3D G3DSA:1.20.1250.20 25 212 3.4E-15 T 25-04-2016 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 PANTHER PTHR11654 11 226 8.1E-144 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 PANTHER PTHR11654 276 455 8.1E-144 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 25-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 495 4.6E-103 T 25-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SMD_RS20385 db790cfaafc326ad3a026d462b85542d 499 Pfam PF00854 POT family 97 456 7.5E-59 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMD_RS02915 da11b2893a2c28ae7839933836bd3f45 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 230 2.3E-46 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMD_RS02915 da11b2893a2c28ae7839933836bd3f45 306 PANTHER PTHR10366 2 302 1.4E-81 T 25-04-2016 SMD_RS02915 da11b2893a2c28ae7839933836bd3f45 306 SUPERFAMILY SSF51735 1 302 7.52E-83 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS02915 da11b2893a2c28ae7839933836bd3f45 306 Gene3D G3DSA:3.40.50.720 1 294 8.5E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS21945 e209069f1a87e0a6789f8fe28f7dc610 256 Pfam PF01694 Rhomboid family 64 195 6.1E-14 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS21945 e209069f1a87e0a6789f8fe28f7dc610 256 SUPERFAMILY SSF144091 23 197 1.7E-21 T 25-04-2016 SMD_RS21945 e209069f1a87e0a6789f8fe28f7dc610 256 PANTHER PTHR22936 16 224 1.3E-77 T 25-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SMD_RS21945 e209069f1a87e0a6789f8fe28f7dc610 256 Gene3D G3DSA:1.20.1540.10 29 195 2.8E-11 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS21945 e209069f1a87e0a6789f8fe28f7dc610 256 PANTHER PTHR22936:SF11 16 224 1.3E-77 T 25-04-2016 SMD_RS18755 1a61a5a4611b21b84e76ae6552bb86e8 394 PANTHER PTHR12049 6 383 7.0E-65 T 25-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SMD_RS18755 1a61a5a4611b21b84e76ae6552bb86e8 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 79 321 4.9E-46 T 25-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SMD_RS18755 1a61a5a4611b21b84e76ae6552bb86e8 394 Gene3D G3DSA:3.40.50.150 80 163 1.0E-5 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18755 1a61a5a4611b21b84e76ae6552bb86e8 394 SUPERFAMILY SSF53335 21 379 3.66E-84 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS04795 43c8c544d14883e131a564aadd6b145f 462 Pfam PF08811 Protein of unknown function (DUF1800) 9 460 1.8E-131 T 25-04-2016 IPR014917 Protein of unknown function DUF1800 SMD_RS02495 5ec8cfdfe7ff88eab83c01526278a5a9 137 PANTHER PTHR35174 2 136 2.7E-49 T 25-04-2016 SMD_RS02495 5ec8cfdfe7ff88eab83c01526278a5a9 137 SUPERFAMILY SSF54909 1 115 3.22E-32 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMD_RS02495 5ec8cfdfe7ff88eab83c01526278a5a9 137 Pfam PF03795 YCII-related domain 1 111 1.4E-19 T 25-04-2016 IPR005545 YCII-related SMD_RS02495 5ec8cfdfe7ff88eab83c01526278a5a9 137 PANTHER PTHR35174:SF1 2 136 2.7E-49 T 25-04-2016 SMD_RS02495 5ec8cfdfe7ff88eab83c01526278a5a9 137 Gene3D G3DSA:3.30.70.1060 1 115 3.0E-34 T 25-04-2016 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 32 101 1.9E-24 T 25-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 SUPERFAMILY SSF101801 28 109 8.63E-25 T 25-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 28 103 5.4E-33 T 25-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 PANTHER PTHR22617 20 110 8.0E-30 T 25-04-2016 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 92 1.8E-25 T 25-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 31 47 1.8E-25 T 25-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 64 77 1.8E-25 T 25-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 48 64 1.8E-25 T 25-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMD_RS10805 5d18bb6123bcfdc960549754fa904277 111 Gene3D G3DSA:2.30.330.10 25 111 8.8E-36 T 25-04-2016 SMD_RS00775 cc6b6f40b2062226f2ee6f0931f2b2fc 145 SUPERFAMILY SSF52821 22 143 1.83E-28 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS00775 cc6b6f40b2062226f2ee6f0931f2b2fc 145 SMART SM00450 42 139 2.1E-21 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS00775 cc6b6f40b2062226f2ee6f0931f2b2fc 145 Pfam PF00581 Rhodanese-like domain 44 135 1.7E-17 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS00775 cc6b6f40b2062226f2ee6f0931f2b2fc 145 PANTHER PTHR12231:SF138 25 145 1.1E-34 T 25-04-2016 SMD_RS00775 cc6b6f40b2062226f2ee6f0931f2b2fc 145 Gene3D G3DSA:3.40.250.10 25 144 4.2E-29 T 25-04-2016 IPR001763 Rhodanese-like domain SMD_RS00775 cc6b6f40b2062226f2ee6f0931f2b2fc 145 PANTHER PTHR12231 25 145 1.1E-34 T 25-04-2016 SMD_RS21770 a0b78dcd8aa1b50620dd724cb8bed4b7 130 Gene3D G3DSA:3.10.450.50 8 129 2.6E-41 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS21770 a0b78dcd8aa1b50620dd724cb8bed4b7 130 PANTHER PTHR33747 1 78 4.7E-14 T 25-04-2016 SMD_RS21770 a0b78dcd8aa1b50620dd724cb8bed4b7 130 SUPERFAMILY SSF54427 28 129 2.47E-31 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS21770 a0b78dcd8aa1b50620dd724cb8bed4b7 130 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 130 28.489 T 25-04-2016 IPR023006 Uncharacterised protein family UPF0225 SMD_RS13775 12ea70d8c568446cc185e817bf3b0497 327 Gene3D G3DSA:1.10.530.10 11 145 3.4E-11 T 25-04-2016 SMD_RS13775 12ea70d8c568446cc185e817bf3b0497 327 SUPERFAMILY SSF53955 15 39 5.16E-14 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS13775 12ea70d8c568446cc185e817bf3b0497 327 SUPERFAMILY SSF53955 67 143 5.16E-14 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS13775 12ea70d8c568446cc185e817bf3b0497 327 Pfam PF01464 Transglycosylase SLT domain 16 138 1.5E-11 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMD_RS21010 bae09859c69f8cd6858e806067d424c0 305 PANTHER PTHR33281:SF3 1 300 1.3E-75 T 25-04-2016 SMD_RS21010 bae09859c69f8cd6858e806067d424c0 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 6.6E-67 T 25-04-2016 IPR021134 Bestrophin/UPF0187 SMD_RS21010 bae09859c69f8cd6858e806067d424c0 305 PANTHER PTHR33281 1 300 1.3E-75 T 25-04-2016 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 Gene3D G3DSA:2.30.42.10 95 185 1.1E-10 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 SUPERFAMILY SSF50156 220 310 5.59E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 PANTHER PTHR22939 222 451 3.2E-66 T 25-04-2016 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 SUPERFAMILY SSF50156 89 183 1.06E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 PANTHER PTHR22939:SF78 222 451 3.2E-66 T 25-04-2016 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 Gene3D G3DSA:2.30.42.10 222 293 9.5E-12 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 12 449 5.8E-94 T 25-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SMD_RS06980 0bef137674831d61efe661f041e045c0 452 Pfam PF02163 Peptidase family M50 11 436 2.2E-75 T 25-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SMD_RS01450 2c17bc49d7d8d9068153d0723723c9e0 378 Gene3D G3DSA:2.60.120.260 85 253 9.7E-7 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 SUPERFAMILY SSF111369 1 228 7.59E-60 T 25-04-2016 SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 PANTHER PTHR30158:SF2 1 314 3.5E-138 T 25-04-2016 SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 PANTHER PTHR30158 1 314 3.5E-138 T 25-04-2016 SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 Pfam PF13533 Biotin-lipoyl like 1 41 1.4E-12 T 25-04-2016 SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 1 305 2.5E-69 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 Gene3D G3DSA:2.40.50.100 102 134 1.3E-17 T 25-04-2016 SMD_RS07865 1e8a50dc45a00b06b9332bb8ed11577f 322 Gene3D G3DSA:2.40.50.100 1 27 1.3E-17 T 25-04-2016 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 PANTHER PTHR10010:SF14 5 227 2.7E-71 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 218 5.4E-60 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 Pfam PF01895 PhoU domain 126 209 9.6E-17 T 25-04-2016 IPR026022 PhoU domain SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 Pfam PF01895 PhoU domain 23 109 9.9E-20 T 25-04-2016 IPR026022 PhoU domain SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 PANTHER PTHR10010 5 227 2.7E-71 T 25-04-2016 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 Gene3D G3DSA:1.20.58.220 6 113 1.1E-29 T 25-04-2016 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 Gene3D G3DSA:1.20.58.220 125 219 1.1E-29 T 25-04-2016 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 SUPERFAMILY SSF109755 10 226 2.83E-65 T 25-04-2016 SMD_RS07230 a56ec6f0526f2ab9dd01006e75af2cbf 235 PIRSF PIRSF003107 5 221 1.0E-58 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMD_RS19405 8e548d79ca753ea26d7deea763060cb8 130 Pfam PF07681 DoxX 10 89 3.5E-18 T 25-04-2016 IPR032808 DoxX family SMD_RS19405 8e548d79ca753ea26d7deea763060cb8 130 PANTHER PTHR33452:SF8 11 124 5.3E-39 T 25-04-2016 SMD_RS19405 8e548d79ca753ea26d7deea763060cb8 130 PANTHER PTHR33452 11 124 5.3E-39 T 25-04-2016 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 Pfam PF04542 Sigma-70 region 2 15 80 2.6E-14 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 SUPERFAMILY SSF88946 11 95 1.18E-17 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 Gene3D G3DSA:1.10.1740.10 10 101 1.0E-17 T 25-04-2016 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 Pfam PF08281 Sigma-70, region 4 113 163 2.3E-12 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 165 4.6E-29 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 PANTHER PTHR30173 9 160 2.2E-32 T 25-04-2016 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 SUPERFAMILY SSF88659 94 165 1.08E-14 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 PANTHER PTHR30173:SF30 9 160 2.2E-32 T 25-04-2016 SMD_RS13455 eac5ab420a1e22a2c4349fa839064bab 169 Gene3D G3DSA:1.10.10.10 104 165 8.7E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS05330 0db0420e6d5323d736fde791566d6b32 225 Pfam PF01168 Alanine racemase, N-terminal domain 7 222 4.5E-32 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMD_RS05330 0db0420e6d5323d736fde791566d6b32 225 PANTHER PTHR10146 5 225 1.9E-87 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMD_RS05330 0db0420e6d5323d736fde791566d6b32 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 22 221 8.5E-68 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMD_RS05330 0db0420e6d5323d736fde791566d6b32 225 SUPERFAMILY SSF51419 4 219 1.44E-72 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS05330 0db0420e6d5323d736fde791566d6b32 225 PIRSF PIRSF004848 5 225 6.8E-73 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMD_RS05330 0db0420e6d5323d736fde791566d6b32 225 Gene3D G3DSA:3.20.20.10 3 222 8.3E-87 T 25-04-2016 IPR029066 PLP-binding barrel SMD_RS03805 4f7013d6fa1fdb57f5c50b7cd080b283 186 PANTHER PTHR11079 13 178 1.3E-89 T 25-04-2016 SMD_RS03805 4f7013d6fa1fdb57f5c50b7cd080b283 186 Gene3D G3DSA:3.40.140.10 25 178 1.3E-30 T 25-04-2016 SMD_RS03805 4f7013d6fa1fdb57f5c50b7cd080b283 186 SUPERFAMILY SSF53927 6 180 5.14E-31 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMD_RS03805 4f7013d6fa1fdb57f5c50b7cd080b283 186 PANTHER PTHR11079:SF77 13 178 1.3E-89 T 25-04-2016 SMD_RS03805 4f7013d6fa1fdb57f5c50b7cd080b283 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 32 130 3.5E-11 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMD_RS06215 1c7f2449614e8071aa2249961b4155a5 148 PANTHER PTHR36302 9 147 4.3E-20 T 25-04-2016 SMD_RS06215 1c7f2449614e8071aa2249961b4155a5 148 SUPERFAMILY SSF110087 2 147 5.23E-39 T 25-04-2016 IPR007410 DR1885-like metal-binding protein SMD_RS06215 1c7f2449614e8071aa2249961b4155a5 148 Pfam PF04314 Protein of unknown function (DUF461) 30 137 2.0E-28 T 25-04-2016 IPR007410 DR1885-like metal-binding protein SMD_RS06215 1c7f2449614e8071aa2249961b4155a5 148 PANTHER PTHR36302:SF1 9 147 4.3E-20 T 25-04-2016 SMD_RS10035 beaee0f89a9a0b37bb9649762c17bebd 1039 Gene3D G3DSA:2.60.120.260 41 161 6.4E-19 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS10035 beaee0f89a9a0b37bb9649762c17bebd 1039 Pfam PF00754 F5/8 type C domain 45 155 1.4E-13 T 25-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SMD_RS10035 beaee0f89a9a0b37bb9649762c17bebd 1039 SUPERFAMILY SSF49785 42 160 3.4E-21 T 25-04-2016 IPR008979 Galactose-binding domain-like SMD_RS10035 beaee0f89a9a0b37bb9649762c17bebd 1039 Gene3D G3DSA:1.50.10.10 610 794 2.9E-6 T 25-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMD_RS10035 beaee0f89a9a0b37bb9649762c17bebd 1039 SUPERFAMILY SSF48208 556 1003 9.59E-24 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS07540 50dc2a731f288b41911d3ded91b0b560 113 Gene3D G3DSA:1.20.1290.10 3 111 4.4E-38 T 25-04-2016 IPR029032 AhpD-like SMD_RS07540 50dc2a731f288b41911d3ded91b0b560 113 PANTHER PTHR33930 3 107 1.3E-28 T 25-04-2016 SMD_RS07540 50dc2a731f288b41911d3ded91b0b560 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 88 1.2E-18 T 25-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS07540 50dc2a731f288b41911d3ded91b0b560 113 PANTHER PTHR33930:SF2 3 107 1.3E-28 T 25-04-2016 SMD_RS07540 50dc2a731f288b41911d3ded91b0b560 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 105 7.1E-21 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMD_RS07540 50dc2a731f288b41911d3ded91b0b560 113 SUPERFAMILY SSF69118 9 107 2.22E-29 T 25-04-2016 IPR029032 AhpD-like SMD_RS18080 880af9ba381c463b008d8a4f0ba7c061 168 Pfam PF11066 Protein of unknown function (DUF2867) 21 158 4.3E-35 T 25-04-2016 IPR021295 Protein of unknown function DUF2867 SMD_RS17025 c31e09639b113dbb4c1aaa878d258958 296 PANTHER PTHR35862:SF1 1 296 1.4E-116 T 25-04-2016 SMD_RS17025 c31e09639b113dbb4c1aaa878d258958 296 PANTHER PTHR35862 1 296 1.4E-116 T 25-04-2016 SMD_RS17025 c31e09639b113dbb4c1aaa878d258958 296 PIRSF PIRSF020481 4 296 4.1E-108 T 25-04-2016 IPR014507 Baseplate assembly protein J, predicted SMD_RS17025 c31e09639b113dbb4c1aaa878d258958 296 Pfam PF04865 Baseplate J-like protein 113 255 2.5E-25 T 25-04-2016 IPR006949 Baseplate protein J-like SMD_RS19310 2e18a7b97bea39e893b2996a94799e6b 116 SUPERFAMILY SSF54593 8 112 9.4E-26 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19310 2e18a7b97bea39e893b2996a94799e6b 116 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 111 4.0E-9 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS19310 2e18a7b97bea39e893b2996a94799e6b 116 Gene3D G3DSA:3.10.180.10 14 115 1.4E-31 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS02335 baf056c12e498e33eccaaecd4a0c00dd 250 PANTHER PTHR35243 7 145 9.3E-16 T 25-04-2016 SMD_RS02335 baf056c12e498e33eccaaecd4a0c00dd 250 PANTHER PTHR35243:SF1 7 145 9.3E-16 T 25-04-2016 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 Gene3D G3DSA:2.40.170.20 394 791 1.0E-83 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 Gene3D G3DSA:2.40.170.20 170 333 1.0E-83 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 162 1.5E-12 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 SUPERFAMILY SSF56935 37 350 2.59E-85 T 25-04-2016 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 SUPERFAMILY SSF56935 393 791 2.59E-85 T 25-04-2016 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 Gene3D G3DSA:2.170.130.10 54 169 3.4E-17 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 Pfam PF00593 TonB dependent receptor 535 790 1.0E-27 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 PANTHER PTHR32552 9 232 2.3E-24 T 25-04-2016 SMD_RS08945 5d4b17f5dcd537ebe59ce76bd728e538 792 PANTHER PTHR32552 296 792 2.3E-24 T 25-04-2016 SMD_RS00840 cdddbc7841a6bd9424e3cc07a07da897 306 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 124 269 2.7E-6 T 25-04-2016 IPR018728 Domain of unknown function DUF2268 SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 Pfam PF00899 ThiF family 19 163 1.8E-37 T 25-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 PANTHER PTHR10953 194 258 1.3E-81 T 25-04-2016 SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 PANTHER PTHR10953 7 161 1.3E-81 T 25-04-2016 SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 PANTHER PTHR10953:SF159 194 258 1.3E-81 T 25-04-2016 SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 PANTHER PTHR10953:SF159 7 161 1.3E-81 T 25-04-2016 SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 Gene3D G3DSA:3.40.50.720 2 259 1.3E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS14545 66b024c6f6a33bcdd54b28822b97af7a 274 SUPERFAMILY SSF69572 7 261 2.75E-58 T 25-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 PANTHER PTHR30121 11 561 1.2E-42 T 25-04-2016 SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 SMART SM00382 179 536 0.0024 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 SUPERFAMILY SSF52540 164 282 1.24E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 SUPERFAMILY SSF52540 402 570 1.24E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 Gene3D G3DSA:3.40.50.300 173 242 2.1E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 Gene3D G3DSA:3.40.50.300 395 566 2.1E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS04680 033933fab75b222fed4555644e4bd99f 581 Pfam PF01935 Domain of unknown function DUF87 166 300 8.5E-18 T 25-04-2016 IPR002789 Helicase HerA, central domain SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 SUPERFAMILY SSF55120 66 230 3.45E-9 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 Gene3D G3DSA:3.10.290.10 2 61 2.0E-15 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 Pfam PF01479 S4 domain 5 50 1.3E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 PANTHER PTHR21600 2 232 3.5E-52 T 25-04-2016 SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 PANTHER PTHR21600:SF21 2 232 3.5E-52 T 25-04-2016 SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 SUPERFAMILY SSF55174 4 74 4.71E-11 T 25-04-2016 SMD_RS16100 f8b206c5b3dba26374f0a16a84c362dd 232 SMART SM00363 4 69 9.1E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 PANTHER PTHR22617:SF5 276 421 1.4E-32 T 25-04-2016 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 Gene3D G3DSA:2.40.50.180 325 359 3.4E-9 T 25-04-2016 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 SUPERFAMILY SSF50341 283 421 6.93E-29 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 PANTHER PTHR22617 276 421 1.4E-32 T 25-04-2016 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 Pfam PF01584 CheW-like domain 288 420 2.1E-28 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 Gene3D G3DSA:2.30.30.40 360 414 2.5E-6 T 25-04-2016 SMD_RS10720 016c0ad06fb1b2742cc5337c53728213 421 SMART SM00260 282 420 1.4E-21 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS05955 8c8c9ba144d42118542f857afde34cd5 158 SUPERFAMILY SSF47473 89 140 8.16E-10 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS05955 8c8c9ba144d42118542f857afde34cd5 158 Gene3D G3DSA:1.10.238.10 88 153 4.7E-10 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS05955 8c8c9ba144d42118542f857afde34cd5 158 Pfam PF13202 EF hand 90 109 0.0011 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS05955 8c8c9ba144d42118542f857afde34cd5 158 Pfam PF13202 EF hand 117 132 4.0E-4 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS05955 8c8c9ba144d42118542f857afde34cd5 158 ProSitePatterns PS00018 EF-hand calcium-binding domain. 94 106 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS15625 f5f4359d0414e45eac0a02d77fe9d9a6 115 SUPERFAMILY SSF89946 28 105 9.29E-6 T 25-04-2016 IPR009671 Regulator of ribonuclease activity B domain SMD_RS15625 f5f4359d0414e45eac0a02d77fe9d9a6 115 Gene3D G3DSA:3.30.70.970 4 105 3.0E-7 T 25-04-2016 IPR009671 Regulator of ribonuclease activity B domain SMD_RS15625 f5f4359d0414e45eac0a02d77fe9d9a6 115 Pfam PF06877 Regulator of ribonuclease activity B 4 108 2.2E-19 T 25-04-2016 IPR009671 Regulator of ribonuclease activity B domain SMD_RS05865 68585705edd6056e2728deef6a5e396c 350 SUPERFAMILY SSF51658 9 323 7.05E-63 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05865 68585705edd6056e2728deef6a5e396c 350 Gene3D G3DSA:3.20.20.150 9 324 1.1E-70 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05865 68585705edd6056e2728deef6a5e396c 350 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 1.2E-21 T 25-04-2016 IPR011418 AP endonuclease, family 2, C-terminal SMD_RS05865 68585705edd6056e2728deef6a5e396c 350 PANTHER PTHR12110 31 338 6.5E-30 T 25-04-2016 SMD_RS05865 68585705edd6056e2728deef6a5e396c 350 PANTHER PTHR12110:SF17 31 338 6.5E-30 T 25-04-2016 SMD_RS05865 68585705edd6056e2728deef6a5e396c 350 Pfam PF01261 Xylose isomerase-like TIM barrel 30 279 5.2E-41 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMD_RS05640 3357fdc0714f49199b1752f57fa00e1b 179 PANTHER PTHR23091:SF184 1 174 2.0E-82 T 25-04-2016 SMD_RS05640 3357fdc0714f49199b1752f57fa00e1b 179 PANTHER PTHR23091 1 174 2.0E-82 T 25-04-2016 SMD_RS05640 3357fdc0714f49199b1752f57fa00e1b 179 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 3.5E-14 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS05640 3357fdc0714f49199b1752f57fa00e1b 179 Gene3D G3DSA:3.40.630.30 2 155 1.2E-30 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS05640 3357fdc0714f49199b1752f57fa00e1b 179 SUPERFAMILY SSF55729 1 155 9.81E-30 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 PANTHER PTHR34990 1 255 2.6E-84 T 25-04-2016 SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 SUPERFAMILY SSF56300 189 254 9.34E-30 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 SUPERFAMILY SSF56300 12 133 9.34E-30 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 13 227 1.9E-8 T 25-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 Gene3D G3DSA:3.60.21.10 196 244 1.1E-25 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 Gene3D G3DSA:3.60.21.10 12 140 1.1E-25 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS03600 6dfe244c558db14c4fa668287b5e84fe 266 PANTHER PTHR34990:SF2 1 255 2.6E-84 T 25-04-2016 SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 SMART SM00382 349 527 1.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 SMART SM00382 32 237 2.3E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 Pfam PF12848 ABC transporter 231 306 1.2E-10 T 25-04-2016 IPR032781 ABC-transporter extension domain SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 SUPERFAMILY SSF52540 10 244 1.26E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 PANTHER PTHR19211:SF7 1 554 0.0 T 25-04-2016 SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 SUPERFAMILY SSF52540 303 523 8.89E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 Gene3D G3DSA:3.40.50.300 9 277 2.8E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 Gene3D G3DSA:3.40.50.300 323 537 1.4E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 Pfam PF00005 ABC transporter 341 474 1.7E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 Pfam PF00005 ABC transporter 24 192 1.1E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 PANTHER PTHR19211 1 554 0.0 T 25-04-2016 SMD_RS03275 8b5a707005e629ef41eaaea51dc9e683 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 2.5E-289 T 25-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 Pfam PF13307 Helicase C-terminal domain 480 636 2.6E-33 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 SMART SM00491 495 623 4.4E-39 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 Gene3D G3DSA:3.40.50.300 26 123 2.3E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 Gene3D G3DSA:3.40.50.300 195 243 2.3E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 PANTHER PTHR11472:SF37 25 641 1.2E-195 T 25-04-2016 SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 SUPERFAMILY SSF52540 192 258 3.77E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 SUPERFAMILY SSF52540 582 619 3.77E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 SUPERFAMILY SSF52540 24 115 3.77E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 Pfam PF00270 DEAD/DEAH box helicase 37 89 1.5E-5 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMD_RS16805 3dbf58adfc99fb780272cb3c242f2e5c 682 PANTHER PTHR11472 25 641 1.2E-195 T 25-04-2016 SMD_RS09900 0e50b29d1066f32e6e6cf1da3438c7a6 125 Pfam PF13788 Domain of unknown function (DUF4180) 11 118 3.7E-30 T 25-04-2016 IPR025438 Domain of unknown function DUF4180 SMD_RS13725 f2fc082f046dc47943c8b9060877f17f 442 PANTHER PTHR35243 252 436 2.2E-18 T 25-04-2016 SMD_RS13725 f2fc082f046dc47943c8b9060877f17f 442 SUPERFAMILY SSF53474 94 180 4.48E-5 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13725 f2fc082f046dc47943c8b9060877f17f 442 SUPERFAMILY SSF53474 219 331 4.48E-5 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13725 f2fc082f046dc47943c8b9060877f17f 442 Gene3D G3DSA:3.40.50.1820 8 198 4.3E-17 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS13725 f2fc082f046dc47943c8b9060877f17f 442 Pfam PF01764 Lipase (class 3) 121 149 1.5E-5 T 25-04-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: REACT_14797|Reactome: REACT_604 SMD_RS13725 f2fc082f046dc47943c8b9060877f17f 442 SUPERFAMILY SSF53474 37 185 8.89E-20 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01810 72713355b19b31ec3dc8c75356d1bac7 298 Gene3D G3DSA:3.30.70.1070 218 297 4.0E-20 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS01810 72713355b19b31ec3dc8c75356d1bac7 298 SUPERFAMILY SSF110997 221 296 8.5E-16 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS01810 72713355b19b31ec3dc8c75356d1bac7 298 Pfam PF05036 Sporulation related domain 223 295 9.3E-15 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMD_RS00655 2a2a61925e236d61d688475d2cddb3e8 264 Pfam PF02673 Bacitracin resistance protein BacA 7 254 1.4E-65 T 25-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SMD_RS00655 2a2a61925e236d61d688475d2cddb3e8 264 PANTHER PTHR30622:SF3 1 260 3.7E-100 T 25-04-2016 SMD_RS00655 2a2a61925e236d61d688475d2cddb3e8 264 PANTHER PTHR30622 1 260 3.7E-100 T 25-04-2016 SMD_RS00655 2a2a61925e236d61d688475d2cddb3e8 264 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 15.875 T 25-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 PANTHER PTHR34408 76 189 6.0E-12 T 25-04-2016 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 PANTHER PTHR34408 17 43 6.0E-12 T 25-04-2016 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 Gene3D G3DSA:1.10.530.10 135 185 5.2E-7 T 25-04-2016 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 Gene3D G3DSA:1.10.530.10 18 37 5.2E-7 T 25-04-2016 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 Pfam PF00182 Chitinase class I 100 151 7.3E-7 T 25-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 Gene3D G3DSA:3.30.20.10 98 134 1.2E-11 T 25-04-2016 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 SUPERFAMILY SSF53955 13 191 3.66E-34 T 25-04-2016 IPR023346 Lysozyme-like domain SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 PANTHER PTHR34408:SF1 76 189 6.0E-12 T 25-04-2016 SMD_RS13735 da7a3d965a4f274d828cfbd21b9d4ca9 335 PANTHER PTHR34408:SF1 17 43 6.0E-12 T 25-04-2016 SMD_RS21090 b9adfaadbfbd6d6e51b068d408c8edc7 389 Gene3D G3DSA:2.70.50.50 28 210 1.5E-55 T 25-04-2016 SMD_RS21090 b9adfaadbfbd6d6e51b068d408c8edc7 389 SUPERFAMILY SSF81296 28 210 1.82E-52 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS21090 b9adfaadbfbd6d6e51b068d408c8edc7 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 207 1.0E-44 T 25-04-2016 IPR004302 Chitin-binding protein, N-terminal SMD_RS21090 b9adfaadbfbd6d6e51b068d408c8edc7 389 PANTHER PTHR34823:SF2 1 386 3.1E-93 T 25-04-2016 SMD_RS21090 b9adfaadbfbd6d6e51b068d408c8edc7 389 PANTHER PTHR34823 1 386 3.1E-93 T 25-04-2016 SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 PANTHER PTHR30050 1 251 5.6E-72 T 25-04-2016 SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 Gene3D G3DSA:3.40.50.300 84 231 2.4E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 PANTHER PTHR30050:SF6 1 251 5.6E-72 T 25-04-2016 SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 SMART SM00382 97 230 2.6E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 PIRSF PIRSF003073 1 252 3.3E-73 T 25-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMD_RS07710 d2eca5ad8ef0646711e159e110bd098d 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.7E-61 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 25-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.0E-42 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 25-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 Gene3D G3DSA:3.30.70.120 1 112 7.0E-49 T 25-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PIRSF PIRSF039144 1 112 2.2E-52 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 SMART SM00938 4 105 1.7E-64 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 SUPERFAMILY SSF54913 1 112 3.11E-45 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PRINTS PR00340 P-II protein signature 23 41 7.1E-42 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PRINTS PR00340 P-II protein signature 2 17 7.1E-42 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PRINTS PR00340 P-II protein signature 52 75 7.1E-42 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PRINTS PR00340 P-II protein signature 83 103 7.1E-42 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PANTHER PTHR30115 1 112 6.8E-68 T 25-04-2016 SMD_RS20530 e7fcc7ef73f0dd8514f7b04a0714ffc4 112 PANTHER PTHR30115:SF15 1 112 6.8E-68 T 25-04-2016 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 PANTHER PTHR26402:SF518 14 199 7.3E-31 T 25-04-2016 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 Gene3D G3DSA:1.10.10.10 100 196 4.7E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 SUPERFAMILY SSF52172 16 94 1.99E-17 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 Pfam PF00072 Response regulator receiver domain 20 88 4.0E-8 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 SMART SM00862 121 194 1.8E-13 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 PANTHER PTHR26402 14 199 7.3E-31 T 25-04-2016 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 SUPERFAMILY SSF46894 100 196 5.39E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 Gene3D G3DSA:3.40.50.2300 15 99 1.4E-13 T 25-04-2016 SMD_RS19365 6b0dc5d25cbcd18ff540a5eb4acc491a 199 Pfam PF00486 Transcriptional regulatory protein, C terminal 122 194 3.1E-13 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMD_RS19890 eb44d76b4414c800582475b8f4235449 198 SUPERFAMILY SSF52218 1 194 1.77E-45 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS19890 eb44d76b4414c800582475b8f4235449 198 PANTHER PTHR10204:SF0 1 174 1.6E-54 T 25-04-2016 SMD_RS19890 eb44d76b4414c800582475b8f4235449 198 Pfam PF02525 Flavodoxin-like fold 1 187 6.8E-42 T 25-04-2016 IPR003680 Flavodoxin-like fold SMD_RS19890 eb44d76b4414c800582475b8f4235449 198 Gene3D G3DSA:3.40.50.360 1 193 1.9E-42 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS19890 eb44d76b4414c800582475b8f4235449 198 PANTHER PTHR10204 1 174 1.6E-54 T 25-04-2016 SMD_RS03210 c6e42eb23d1d9bf08351c3e8b631173b 279 Gene3D G3DSA:3.90.550.10 8 248 6.3E-41 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03210 c6e42eb23d1d9bf08351c3e8b631173b 279 PANTHER PTHR22916 158 279 6.2E-35 T 25-04-2016 SMD_RS03210 c6e42eb23d1d9bf08351c3e8b631173b 279 PANTHER PTHR22916 5 141 6.2E-35 T 25-04-2016 SMD_RS03210 c6e42eb23d1d9bf08351c3e8b631173b 279 SUPERFAMILY SSF53448 5 254 3.75E-46 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03210 c6e42eb23d1d9bf08351c3e8b631173b 279 Pfam PF00535 Glycosyl transferase family 2 7 178 9.7E-21 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS21245 5add925d7bb3b66cb0e4feb1d4c7859f 151 Gene3D G3DSA:3.10.129.10 5 135 9.7E-15 T 25-04-2016 IPR029069 HotDog domain SMD_RS21245 5add925d7bb3b66cb0e4feb1d4c7859f 151 PIRSF PIRSF020565 1 151 1.8E-46 T 25-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted SMD_RS21245 5add925d7bb3b66cb0e4feb1d4c7859f 151 SUPERFAMILY SSF54637 6 142 6.15E-24 T 25-04-2016 IPR029069 HotDog domain SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 Pfam PF03350 Uncharacterized protein family, UPF0114 15 131 5.1E-41 T 25-04-2016 IPR005134 Uncharacterised protein family UPF0114 SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 12 200 8.8E-57 T 25-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 200 87.732 T 25-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 PANTHER PTHR38596 14 133 5.0E-74 T 25-04-2016 SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 PANTHER PTHR38596 152 202 5.0E-74 T 25-04-2016 SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 PANTHER PTHR38596:SF1 14 133 5.0E-74 T 25-04-2016 SMD_RS21045 c86713825e2ba09890ceb555a2fc45fe 206 PANTHER PTHR38596:SF1 152 202 5.0E-74 T 25-04-2016 SMD_RS04920 332fd44aebd1fa5e231e00a71cf44b14 320 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 94 301 7.2E-90 T 25-04-2016 IPR014142 P-type conjugative transfer protein TrbG SMD_RS04920 332fd44aebd1fa5e231e00a71cf44b14 320 Pfam PF03524 Conjugal transfer protein 93 312 7.4E-65 T 25-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX SMD_RS02160 f44b5ec99b9adf3a62f4881b325e305a 253 PANTHER PTHR38589 25 243 1.6E-56 T 25-04-2016 SMD_RS02160 f44b5ec99b9adf3a62f4881b325e305a 253 PANTHER PTHR38589:SF1 25 243 1.6E-56 T 25-04-2016 SMD_RS02160 f44b5ec99b9adf3a62f4881b325e305a 253 Pfam PF03734 L,D-transpeptidase catalytic domain 45 223 5.7E-6 T 25-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SMD_RS02625 b0a9baf5cfe7b1d53da39dd2b5ac8851 91 Pfam PF13223 Protein of unknown function (DUF4031) 3 79 2.4E-31 T 25-04-2016 IPR025109 Domain of unknown function DUF4031 SMD_RS10185 a45ed3ee32ecca3c11d6ae3afbf23080 142 SMART SM01034 3 95 1.2E-25 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS10185 a45ed3ee32ecca3c11d6ae3afbf23080 142 Pfam PF04940 Sensors of blue-light using FAD 4 94 4.3E-26 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS10185 a45ed3ee32ecca3c11d6ae3afbf23080 142 SUPERFAMILY SSF54975 3 108 6.87E-29 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS18115 4c2f64a24d38bf4d44136f2ceabba9b5 129 Pfam PF04343 Protein of unknown function, DUF488 23 120 1.5E-16 T 25-04-2016 IPR007438 Protein of unknown function DUF488 SMD_RS12190 491de512c8a6d163bce4bc277f81f01f 221 Pfam PF05857 TraX protein 20 216 5.9E-40 T 25-04-2016 IPR008875 TraX SMD_RS20380 9a354581913edc5fcf750898cb309c5a 201 Pfam PF13899 Thioredoxin-like 79 164 3.0E-16 T 25-04-2016 SMD_RS20380 9a354581913edc5fcf750898cb309c5a 201 Gene3D G3DSA:3.40.30.10 77 195 1.9E-11 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS20380 9a354581913edc5fcf750898cb309c5a 201 SUPERFAMILY SSF52833 57 172 8.54E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 PANTHER PTHR34182 3 127 7.0E-31 T 25-04-2016 SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 Pfam PF03840 Preprotein translocase SecG subunit 5 72 5.5E-20 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 1.8E-23 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 6.4E-34 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 6.4E-34 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 6.4E-34 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMD_RS15490 f9e7015dd7652bb119f1e93eb556177c 145 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 6.4E-34 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMD_RS15665 888147d97d2bf17c3f9c4f4754726369 131 Gene3D G3DSA:3.90.1720.10 7 110 3.2E-6 T 25-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS15665 888147d97d2bf17c3f9c4f4754726369 131 SUPERFAMILY SSF54001 7 129 2.45E-5 T 25-04-2016 SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 461 1.5E-42 T 25-04-2016 IPR000160 GGDEF domain SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 PANTHER PTHR10799 70 467 8.6E-27 T 25-04-2016 SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 SUPERFAMILY SSF55073 311 464 2.82E-44 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 SMART SM00267 295 465 4.9E-63 T 25-04-2016 IPR000160 GGDEF domain SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 Gene3D G3DSA:3.30.70.270 308 466 4.0E-49 T 25-04-2016 SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 PANTHER PTHR10799:SF750 70 467 8.6E-27 T 25-04-2016 SMD_RS18525 14bfa78cd6c5e10871be27728f8f1b38 481 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 302 464 3.9E-48 T 25-04-2016 IPR000160 GGDEF domain SMD_RS08240 340c8f6b086e023c1d3558da05716833 291 SUPERFAMILY SSF52540 1 266 9.46E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08240 340c8f6b086e023c1d3558da05716833 291 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 194 2.2E-25 T 25-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMD_RS08240 340c8f6b086e023c1d3558da05716833 291 PANTHER PTHR13696 1 274 2.9E-35 T 25-04-2016 SMD_RS08240 340c8f6b086e023c1d3558da05716833 291 Gene3D G3DSA:3.40.50.300 1 268 1.8E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS09730 81d2dfef2507ca4335061b82f19d36e5 329 PANTHER PTHR22926:SF3 1 329 3.3E-61 T 25-04-2016 SMD_RS09730 81d2dfef2507ca4335061b82f19d36e5 329 Pfam PF00953 Glycosyl transferase family 4 77 214 3.0E-25 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS09730 81d2dfef2507ca4335061b82f19d36e5 329 PANTHER PTHR22926 1 329 3.3E-61 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMD_RS01985 14569fc83d6e36551988f7b8235495a7 433 Gene3D G3DSA:2.70.70.10 298 431 3.3E-35 T 25-04-2016 SMD_RS01985 14569fc83d6e36551988f7b8235495a7 433 PANTHER PTHR21666:SF213 23 433 1.6E-74 T 25-04-2016 SMD_RS01985 14569fc83d6e36551988f7b8235495a7 433 Pfam PF01551 Peptidase family M23 333 426 7.8E-26 T 25-04-2016 IPR016047 Peptidase M23 SMD_RS01985 14569fc83d6e36551988f7b8235495a7 433 SUPERFAMILY SSF51261 270 430 5.75E-42 T 25-04-2016 IPR011055 Duplicated hybrid motif SMD_RS01985 14569fc83d6e36551988f7b8235495a7 433 PANTHER PTHR21666 23 433 1.6E-74 T 25-04-2016 SMD_RS16050 34eaf3b4618019a7dec598a9477c0a8c 83 Pfam PF03692 Putative zinc- or iron-chelating domain 25 58 2.7E-6 T 25-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 SUPERFAMILY SSF89447 2 136 3.56E-36 T 25-04-2016 SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 PANTHER PTHR34701 2 145 2.1E-57 T 25-04-2016 SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 147 6.1E-29 T 25-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 4.2E-8 T 25-04-2016 IPR020603 MraZ domain SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 Pfam PF02381 MraZ protein, putative antitoxin-like 80 133 2.2E-12 T 25-04-2016 IPR020603 MraZ domain SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 1.0E-63 T 25-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SMD_RS03420 c346d814a088c2266f3e1b689a5972f4 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 41.807 T 25-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SMD_RS12170 8521bba26f0bd93c5d384c8641546704 362 PANTHER PTHR30528 2 362 2.8E-85 T 25-04-2016 SMD_RS12170 8521bba26f0bd93c5d384c8641546704 362 Pfam PF06224 Winged helix DNA-binding domain 29 361 5.9E-55 T 25-04-2016 IPR009351 Protein of unknown function DUF1006 SMD_RS02545 aba2a14b54b027d3a429d31a69d91909 419 SUPERFAMILY SSF55874 283 409 1.7E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02545 aba2a14b54b027d3a429d31a69d91909 419 Gene3D G3DSA:3.30.565.10 310 411 6.2E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02545 aba2a14b54b027d3a429d31a69d91909 419 PANTHER PTHR34220 184 416 6.6E-53 T 25-04-2016 SMD_RS02545 aba2a14b54b027d3a429d31a69d91909 419 PANTHER PTHR34220:SF3 184 416 6.6E-53 T 25-04-2016 SMD_RS02545 aba2a14b54b027d3a429d31a69d91909 419 SMART SM00387 316 412 3.5E-5 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMD_RS02545 aba2a14b54b027d3a429d31a69d91909 419 Pfam PF06580 Histidine kinase 222 301 1.5E-19 T 25-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 Gene3D G3DSA:3.40.309.10 229 421 1.6E-49 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 PIRSF PIRSF036492 1 469 4.6E-155 T 25-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 PANTHER PTHR11699:SF15 1 469 1.1E-163 T 25-04-2016 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 214 221 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 SUPERFAMILY SSF53720 4 438 1.57E-110 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 Pfam PF00171 Aldehyde dehydrogenase family 23 436 1.8E-87 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 Gene3D G3DSA:3.40.605.10 3 228 1.3E-57 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMD_RS21550 249f021b932beb9235c7f217efb28ef5 469 PANTHER PTHR11699 1 469 1.1E-163 T 25-04-2016 SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 Pfam PF13444 Acetyltransferase (GNAT) domain 326 427 5.6E-23 T 25-04-2016 SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 PANTHER PTHR37323:SF1 13 569 8.9E-73 T 25-04-2016 SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 SUPERFAMILY SSF69593 76 243 3.66E-9 T 25-04-2016 SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 SUPERFAMILY SSF55729 314 468 6.78E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 PANTHER PTHR37323 13 569 8.9E-73 T 25-04-2016 SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 Pfam PF01553 Acyltransferase 76 197 2.4E-8 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS03595 d407a21741ec321ddc1ea1684115862e 571 SMART SM00563 83 200 8.5E-10 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PANTHER PTHR24319 1 247 5.9E-43 T 25-04-2016 SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 248 9.5E-51 T 25-04-2016 SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 SUPERFAMILY SSF51735 1 249 1.09E-66 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 Gene3D G3DSA:3.40.50.720 2 248 2.9E-70 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PANTHER PTHR24319:SF23 1 247 5.9E-43 T 25-04-2016 SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.6E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.6E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 4.6E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.6E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.6E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS16695 bb383d4d53650ecdf37bbb476aea8bd5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.6E-33 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 455 1.3E-142 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 456 36.15 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 SUPERFAMILY SSF47323 317 455 3.79E-29 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 Pfam PF09190 DALR domain 340 398 2.3E-10 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 23 313 1.2E-110 T 25-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 Gene3D G3DSA:3.40.50.620 25 306 1.1E-93 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 SUPERFAMILY SSF52374 4 314 4.35E-86 T 25-04-2016 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 Gene3D G3DSA:1.20.120.640 310 376 1.4E-10 T 25-04-2016 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.5E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.5E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 3.5E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 3.5E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 SMART SM00840 339 398 8.5E-11 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SMD_RS14970 bac5fe696299553c964bf354c9707ebb 458 PANTHER PTHR10890 1 453 7.5E-204 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMD_RS02205 f8dc435f4d8b4ab366c03c30cf626336 136 SUPERFAMILY SSF47473 73 121 3.17E-9 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS02205 f8dc435f4d8b4ab366c03c30cf626336 136 Gene3D G3DSA:1.10.238.10 76 123 4.4E-9 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS02205 f8dc435f4d8b4ab366c03c30cf626336 136 Pfam PF13202 EF hand 78 90 0.019 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS02205 f8dc435f4d8b4ab366c03c30cf626336 136 Pfam PF13202 EF hand 98 119 3.7E-6 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS02205 f8dc435f4d8b4ab366c03c30cf626336 136 ProSitePatterns PS00018 EF-hand calcium-binding domain. 105 117 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS01260 165f73b036464e56b7a30ade510f7254 285 SUPERFAMILY SSF103481 184 285 4.32E-6 T 25-04-2016 SMD_RS21285 47dcac485c18a514564aaea8d5cd3f86 313 PANTHER PTHR30606 114 306 6.6E-21 T 25-04-2016 SMD_RS21285 47dcac485c18a514564aaea8d5cd3f86 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 120 306 1.4E-6 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMD_RS07795 7a617fb2d36cfed40d42dcfae0963c9b 251 Pfam PF05275 Copper resistance protein B precursor (CopB) 46 251 1.8E-87 T 25-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 SMD_RS03710 7d0eec35fb14eb5360a4169dd220ac3d 295 PANTHER PTHR30373:SF2 3 295 8.0E-76 T 25-04-2016 SMD_RS03710 7d0eec35fb14eb5360a4169dd220ac3d 295 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 33 154 5.3E-37 T 25-04-2016 IPR007621 TPM domain SMD_RS03710 7d0eec35fb14eb5360a4169dd220ac3d 295 PANTHER PTHR30373 3 295 8.0E-76 T 25-04-2016 SMD_RS14685 2d6e50012862e14b8f146a7e9fedf43d 116 Gene3D G3DSA:3.30.1360.20 18 113 1.3E-29 T 25-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SMD_RS14685 2d6e50012862e14b8f146a7e9fedf43d 116 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 23.736 T 25-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SMD_RS14685 2d6e50012862e14b8f146a7e9fedf43d 116 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 1.3E-27 T 25-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SMD_RS14685 2d6e50012862e14b8f146a7e9fedf43d 116 SUPERFAMILY SSF55248 21 114 1.22E-31 T 25-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SMD_RS14685 2d6e50012862e14b8f146a7e9fedf43d 116 PANTHER PTHR12599 7 108 3.1E-35 T 25-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SMD_RS02500 9a11d914a5770e35e354f987fd219806 140 SUPERFAMILY SSF54593 1 137 1.93E-33 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS02500 9a11d914a5770e35e354f987fd219806 140 PANTHER PTHR33990 1 139 6.2E-40 T 25-04-2016 SMD_RS02500 9a11d914a5770e35e354f987fd219806 140 PANTHER PTHR33990:SF1 1 139 6.2E-40 T 25-04-2016 SMD_RS02500 9a11d914a5770e35e354f987fd219806 140 Gene3D G3DSA:3.10.180.10 9 137 3.4E-40 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS02500 9a11d914a5770e35e354f987fd219806 140 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 134 6.8E-7 T 25-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 Gene3D G3DSA:1.10.238.10 25 71 3.5E-12 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 Pfam PF13202 EF hand 92 114 7.9E-4 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 SMART SM00054 89 117 0.0071 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 SMART SM00054 63 86 13.0 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 SMART SM00054 28 56 6.5 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 Pfam PF13499 EF-hand domain pair 31 83 1.6E-9 T 25-04-2016 IPR002048 EF-hand domain GO:0005509 SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 Gene3D G3DSA:1.10.238.10 72 116 2.0E-12 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 ProSitePatterns PS00018 EF-hand calcium-binding domain. 37 49 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 ProSitePatterns PS00018 EF-hand calcium-binding domain. 98 110 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS13915 0c09dc80ca850f451df5a8b0b7c30058 125 SUPERFAMILY SSF47473 23 115 8.23E-19 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.2E-108 T 25-04-2016 IPR005215 Trigger factor GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 SUPERFAMILY SSF102735 1 127 1.16E-29 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 SUPERFAMILY SSF109998 245 429 2.35E-38 T 25-04-2016 IPR027304 Trigger factor/SurA domain SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 PIRSF PIRSF003095 1 431 1.2E-104 T 25-04-2016 IPR005215 Trigger factor GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 Gene3D G3DSA:1.10.3120.10 200 389 6.1E-46 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 PANTHER PTHR30560 1 431 9.2E-110 T 25-04-2016 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 Gene3D G3DSA:3.30.70.1050 1 112 1.0E-29 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 PANTHER PTHR30560:SF3 1 431 9.2E-110 T 25-04-2016 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 Hamap MF_00303 Trigger factor [tig]. 1 424 17.976 T 25-04-2016 IPR005215 Trigger factor GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 2.4E-34 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 414 4.0E-35 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SMD_RS04590 6a62039ded2b6858de9346c0b29f4915 431 SUPERFAMILY SSF54534 129 241 8.55E-17 T 25-04-2016 SMD_RS11080 14c8dc450894ef3c9e4c339a68ed0667 492 Gene3D G3DSA:3.40.630.40 259 380 1.5E-22 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS11080 14c8dc450894ef3c9e4c339a68ed0667 492 Gene3D G3DSA:3.40.630.40 179 215 1.5E-22 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS11080 14c8dc450894ef3c9e4c339a68ed0667 492 SUPERFAMILY SSF53187 180 215 1.44E-18 T 25-04-2016 SMD_RS11080 14c8dc450894ef3c9e4c339a68ed0667 492 SUPERFAMILY SSF53187 259 381 1.44E-18 T 25-04-2016 SMD_RS11080 14c8dc450894ef3c9e4c339a68ed0667 492 SMART SM00646 264 382 8.2E-12 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS11080 14c8dc450894ef3c9e4c339a68ed0667 492 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 179 377 2.1E-15 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS05010 f7e5b7f20f30b36334aa09552f028096 228 Pfam PF07811 TadE-like protein 13 55 3.0E-9 T 25-04-2016 IPR012495 TadE-like SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 71 127 1.5E-24 T 25-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773 508 547 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773 1 209 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773 575 673 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773 232 486 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 274 300 1.8E-45 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 342 354 1.8E-45 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 1.8E-45 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 252 273 1.8E-45 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 451 470 1.8E-45 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 Pfam PF00361 Proton-conducting membrane transporter 139 432 6.6E-88 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 719 9.5E-233 T 25-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773:SF50 508 547 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773:SF50 1 209 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773:SF50 575 673 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PANTHER PTHR22773:SF50 232 486 1.2E-251 T 25-04-2016 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 385 407 4.4E-13 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 523 544 4.4E-13 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 4.4E-13 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 661 687 4.4E-13 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMD_RS15425 33242c6adaf0c11ec6701d8a28e393b6 724 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 4.4E-13 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 PANTHER PTHR10916:SF0 1 57 3.8E-21 T 25-04-2016 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 Gene3D G3DSA:1.10.287.310 1 58 2.9E-23 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 Pfam PF00831 Ribosomal L29 protein 4 57 4.2E-22 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.63 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 SUPERFAMILY SSF46561 1 59 4.71E-19 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 PANTHER PTHR10916 1 57 3.8E-21 T 25-04-2016 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 25-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS04210 73156137c7692a74880e7a9f747a491e 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 57 2.0E-22 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS05840 0e8d019ec7bb9fd31467e933cc097e57 252 Pfam PF06439 Domain of Unknown Function (DUF1080) 58 250 2.6E-38 T 25-04-2016 IPR010496 Domain of unknown function DUF1080 SMD_RS05840 0e8d019ec7bb9fd31467e933cc097e57 252 PANTHER PTHR33546 93 252 3.2E-25 T 25-04-2016 SMD_RS05840 0e8d019ec7bb9fd31467e933cc097e57 252 PANTHER PTHR33546:SF1 93 252 3.2E-25 T 25-04-2016 SMD_RS01395 eac8128e3df24bdf0e66b8572011c0fa 118 Pfam PF11367 Protein of unknown function (DUF3168) 10 87 1.8E-11 T 25-04-2016 IPR021508 Protein of unknown function DUF3168 SMD_RS06025 34b4e42a747f6a97a7dfa283dba7836a 213 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 7 199 1.6E-49 T 25-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 SMD_RS06025 34b4e42a747f6a97a7dfa283dba7836a 213 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 200 4.4E-54 T 25-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 SMD_RS21790 9a4f12416df08a526aef17dbf83067fd 489 Pfam PF11855 Protein of unknown function (DUF3375) 11 480 2.9E-152 T 25-04-2016 IPR021804 Protein of unknown function DUF3375 SMD_RS17650 359726af26a3c64699b823b6dfd8f658 334 SUPERFAMILY SSF51569 4 333 1.88E-133 T 25-04-2016 SMD_RS17650 359726af26a3c64699b823b6dfd8f658 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 25-04-2016 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SMD_RS17650 359726af26a3c64699b823b6dfd8f658 334 Gene3D G3DSA:3.20.20.70 4 333 1.7E-149 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMD_RS17650 359726af26a3c64699b823b6dfd8f658 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 4.8E-140 T 25-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMD_RS17650 359726af26a3c64699b823b6dfd8f658 334 PANTHER PTHR11627:SF20 4 334 1.2E-188 T 25-04-2016 SMD_RS17650 359726af26a3c64699b823b6dfd8f658 334 PANTHER PTHR11627 4 334 1.2E-188 T 25-04-2016 SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 PANTHER PTHR30469:SF16 1 355 9.2E-115 T 25-04-2016 SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 Gene3D G3DSA:2.40.50.100 63 96 2.0E-11 T 25-04-2016 SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 Gene3D G3DSA:2.40.50.100 157 188 2.0E-11 T 25-04-2016 SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 69 - T 25-04-2016 IPR010916 TonB box, conserved site SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 343 1.7E-74 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 SUPERFAMILY SSF111369 52 267 5.23E-40 T 25-04-2016 SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 262 7.2E-32 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS17615 2402038092bea4a5694b5f27e1916d88 368 PANTHER PTHR30469 1 355 9.2E-115 T 25-04-2016 SMD_RS07405 07c447dca9219829539474fbbc9a2c79 280 PANTHER PTHR30222:SF1 13 276 6.1E-80 T 25-04-2016 SMD_RS07405 07c447dca9219829539474fbbc9a2c79 280 SUPERFAMILY SSF161098 4 263 2.88E-49 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07405 07c447dca9219829539474fbbc9a2c79 280 PANTHER PTHR30222 13 276 6.1E-80 T 25-04-2016 SMD_RS07405 07c447dca9219829539474fbbc9a2c79 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 254 2.1E-12 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07405 07c447dca9219829539474fbbc9a2c79 280 Gene3D G3DSA:1.10.3720.10 12 268 7.6E-55 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07310 fd64f85b6c0a429fd7607858cffb85d7 109 Pfam PF11804 Protein of unknown function (DUF3325) 3 104 1.8E-30 T 25-04-2016 IPR021762 Protein of unknown function DUF3325 SMD_RS00620 2f429f42e20455543709de22595fffb4 144 Gene3D G3DSA:3.10.129.10 5 140 5.3E-49 T 25-04-2016 IPR029069 HotDog domain SMD_RS00620 2f429f42e20455543709de22595fffb4 144 Pfam PF03061 Thioesterase superfamily 52 130 1.2E-17 T 25-04-2016 IPR006683 Thioesterase domain SMD_RS00620 2f429f42e20455543709de22595fffb4 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 137 8.4E-40 T 25-04-2016 IPR003736 Phenylacetic acid degradation-related domain SMD_RS00620 2f429f42e20455543709de22595fffb4 144 SUPERFAMILY SSF54637 13 139 5.34E-31 T 25-04-2016 IPR029069 HotDog domain SMD_RS00620 2f429f42e20455543709de22595fffb4 144 PANTHER PTHR12418 1 139 9.2E-56 T 25-04-2016 SMD_RS00620 2f429f42e20455543709de22595fffb4 144 PANTHER PTHR12418:SF33 1 139 9.2E-56 T 25-04-2016 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 SUPERFAMILY SSF56935 668 712 1.88E-65 T 25-04-2016 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 SUPERFAMILY SSF56935 922 998 1.88E-65 T 25-04-2016 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 SUPERFAMILY SSF56935 114 615 1.88E-65 T 25-04-2016 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 SUPERFAMILY SSF56935 769 884 1.88E-65 T 25-04-2016 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Pfam PF13620 Carboxypeptidase regulatory-like domain 32 112 7.0E-16 T 25-04-2016 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.170.130.10 116 239 7.1E-10 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 SUPERFAMILY SSF49452 27 111 7.26E-12 T 25-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.60.40.1120 38 112 1.3E-9 T 25-04-2016 IPR014766 Carboxypeptidase, regulatory domain SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.40.170.20 240 248 6.1E-50 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.40.170.20 655 882 6.1E-50 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.40.170.20 281 501 6.1E-50 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.40.170.20 920 997 6.1E-50 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Gene3D G3DSA:2.40.170.20 536 618 6.1E-50 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS02185 0c54591eaa419159056a27beaca38047 999 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 236 2.9E-9 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15035 4530f034bd0b70bed546bfc52e1a39cc 310 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 42 290 4.9E-51 T 25-04-2016 SMD_RS15035 4530f034bd0b70bed546bfc52e1a39cc 310 PANTHER PTHR35841 29 310 5.6E-49 T 25-04-2016 SMD_RS15035 4530f034bd0b70bed546bfc52e1a39cc 310 Gene3D G3DSA:3.40.190.10 124 172 7.8E-7 T 25-04-2016 SMD_RS15035 4530f034bd0b70bed546bfc52e1a39cc 310 PANTHER PTHR35841:SF1 29 310 5.6E-49 T 25-04-2016 SMD_RS15035 4530f034bd0b70bed546bfc52e1a39cc 310 SUPERFAMILY SSF53850 35 283 1.85E-23 T 25-04-2016 SMD_RS03880 697c9f39667ed990eb2830fd3ddf5bdd 265 SUPERFAMILY SSF53187 13 261 2.04E-76 T 25-04-2016 SMD_RS03880 697c9f39667ed990eb2830fd3ddf5bdd 265 Gene3D G3DSA:3.40.630.40 22 260 7.8E-85 T 25-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMD_RS03880 697c9f39667ed990eb2830fd3ddf5bdd 265 Pfam PF05013 N-formylglutamate amidohydrolase 30 237 2.5E-45 T 25-04-2016 IPR007709 N-formylglutamate amidohydrolase SMD_RS03880 697c9f39667ed990eb2830fd3ddf5bdd 265 PIRSF PIRSF029730 10 264 1.2E-98 T 25-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 298 5.5E-19 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 PANTHER PTHR30469 1 391 1.5E-164 T 25-04-2016 SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 SUPERFAMILY SSF111369 67 303 5.49E-56 T 25-04-2016 SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 Gene3D G3DSA:2.40.50.100 77 111 1.8E-23 T 25-04-2016 SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 Gene3D G3DSA:2.40.50.100 186 218 1.8E-23 T 25-04-2016 SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 380 3.4E-80 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMD_RS20110 b04cd962a61b0dbb6b198f4719efe96d 414 PANTHER PTHR30469:SF12 1 391 1.5E-164 T 25-04-2016 IPR022824 Multidrug resistance protein MdtA SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 SUPERFAMILY SSF81901 44 278 3.14E-16 T 25-04-2016 SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 34.872 T 25-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 Gene3D G3DSA:1.25.40.10 190 315 8.8E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 Gene3D G3DSA:1.25.40.10 44 169 8.7E-16 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 PANTHER PTHR23083 33 319 8.6E-22 T 25-04-2016 SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 Pfam PF13432 Tetratricopeptide repeat 79 145 0.0035 T 25-04-2016 SMD_RS09725 b977d38db605251ad5afd45d2975fd39 392 Pfam PF13432 Tetratricopeptide repeat 226 284 3.2E-5 T 25-04-2016 SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 137 2.4E-44 T 25-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 PANTHER PTHR10849:SF20 2 162 4.7E-87 T 25-04-2016 SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 SUPERFAMILY SSF54862 36 145 4.02E-25 T 25-04-2016 SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 PANTHER PTHR10849 2 162 4.7E-87 T 25-04-2016 SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.625 T 25-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 6.0E-12 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMD_RS15440 840a8fb12ba5dd94da784a9a06d72e07 162 Gene3D G3DSA:1.10.1060.10 18 127 7.8E-21 T 25-04-2016 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 Gene3D G3DSA:3.40.1190.10 116 308 2.3E-51 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 Gene3D G3DSA:3.90.190.20 311 452 4.4E-30 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 Gene3D G3DSA:3.40.50.720 6 93 5.2E-7 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 PANTHER PTHR23135:SF2 2 453 2.3E-120 T 25-04-2016 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 456 27.075 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 PANTHER PTHR23135 2 453 2.3E-120 T 25-04-2016 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 SUPERFAMILY SSF53244 310 453 1.31E-26 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 SUPERFAMILY SSF53623 117 307 5.76E-45 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 Pfam PF08245 Mur ligase middle domain 120 289 1.2E-29 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 380 1.1E-5 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMD_RS05730 1ae9e01222384f103b32f38de3b47915 469 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 452 6.0E-89 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMD_RS05565 1c7cffb8d36e51634a75542411f32ce3 360 PANTHER PTHR30582:SF2 37 256 7.3E-55 T 25-04-2016 SMD_RS05565 1c7cffb8d36e51634a75542411f32ce3 360 PANTHER PTHR30582 37 256 7.3E-55 T 25-04-2016 SMD_RS05565 1c7cffb8d36e51634a75542411f32ce3 360 Gene3D G3DSA:2.40.440.10 61 172 9.7E-22 T 25-04-2016 SMD_RS05565 1c7cffb8d36e51634a75542411f32ce3 360 Pfam PF03734 L,D-transpeptidase catalytic domain 65 172 2.9E-22 T 25-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SMD_RS05565 1c7cffb8d36e51634a75542411f32ce3 360 SUPERFAMILY SSF141523 62 172 9.55E-32 T 25-04-2016 SMD_RS02725 c83be0f127167927db0d5353c72551ec 303 SMART SM00849 52 237 2.4E-24 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS02725 c83be0f127167927db0d5353c72551ec 303 Pfam PF00753 Metallo-beta-lactamase superfamily 52 237 2.3E-15 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS02725 c83be0f127167927db0d5353c72551ec 303 Gene3D G3DSA:3.60.15.10 40 264 9.9E-39 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS02725 c83be0f127167927db0d5353c72551ec 303 SUPERFAMILY SSF56281 37 260 1.96E-41 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS02725 c83be0f127167927db0d5353c72551ec 303 PANTHER PTHR11935 4 303 1.4E-82 T 25-04-2016 SMD_RS02725 c83be0f127167927db0d5353c72551ec 303 PANTHER PTHR11935:SF5 4 303 1.4E-82 T 25-04-2016 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 Gene3D G3DSA:1.10.287.70 36 244 9.7E-51 T 25-04-2016 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 SUPERFAMILY SSF81324 29 244 1.5E-52 T 25-04-2016 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 Pfam PF00520 Ion transport protein 35 250 5.1E-33 T 25-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PANTHER PTHR11537:SF137 7 260 5.6E-105 T 25-04-2016 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 131 157 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 218 244 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 27 55 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 69 92 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 160 183 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 189 211 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PRINTS PR00169 Potassium channel signature 95 115 3.2E-32 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18045 2dcfa783b649dd82facbde0f09b1d344 290 PANTHER PTHR11537 7 260 5.6E-105 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMD_RS18980 1c2ff015a864fcd073f78391676039c9 90 Pfam PF13627 Prokaryotic lipoprotein-attachment site 13 33 3.8E-7 T 25-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site SMD_RS03050 ccd303941b22293b61bb137a535cb376 127 SUPERFAMILY SSF81273 82 125 1.96E-12 T 25-04-2016 SMD_RS03050 ccd303941b22293b61bb137a535cb376 127 PANTHER PTHR38097 1 126 1.9E-26 T 25-04-2016 SMD_RS03050 ccd303941b22293b61bb137a535cb376 127 Pfam PF00816 H-NS histone family 12 116 1.3E-23 T 25-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SMD_RS03050 ccd303941b22293b61bb137a535cb376 127 SMART SM00528 78 124 2.3E-12 T 25-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SMD_RS03050 ccd303941b22293b61bb137a535cb376 127 Gene3D G3DSA:4.10.430.10 83 125 4.6E-16 T 25-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SMD_RS03300 5bcb3ce684119a672899c3de0e07e92b 173 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.5E-60 T 25-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SMD_RS03300 5bcb3ce684119a672899c3de0e07e92b 173 Pfam PF03477 ATP cone domain 51 136 2.0E-15 T 25-04-2016 IPR005144 ATP-cone domain SMD_RS03300 5bcb3ce684119a672899c3de0e07e92b 173 PANTHER PTHR30455:SF2 2 156 3.7E-67 T 25-04-2016 SMD_RS03300 5bcb3ce684119a672899c3de0e07e92b 173 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.047 T 25-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SMD_RS03300 5bcb3ce684119a672899c3de0e07e92b 173 PANTHER PTHR30455 2 156 3.7E-67 T 25-04-2016 SMD_RS19655 936f181552222b039fece6f3eeab2c8a 375 PANTHER PTHR32039:SF8 64 373 1.4E-96 T 25-04-2016 SMD_RS19655 936f181552222b039fece6f3eeab2c8a 375 Gene3D G3DSA:3.40.50.450 112 286 1.5E-13 T 25-04-2016 SMD_RS19655 936f181552222b039fece6f3eeab2c8a 375 SUPERFAMILY SSF102405 81 286 6.72E-42 T 25-04-2016 SMD_RS19655 936f181552222b039fece6f3eeab2c8a 375 PANTHER PTHR32039 64 373 1.4E-96 T 25-04-2016 SMD_RS19655 936f181552222b039fece6f3eeab2c8a 375 Pfam PF02481 DNA recombination-mediator protein A 71 277 4.3E-71 T 25-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SMD_RS19655 936f181552222b039fece6f3eeab2c8a 375 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 70 285 1.3E-68 T 25-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SMD_RS11385 eed9e9cbc00a6128c12f57aa798938a8 127 Pfam PF12472 Phage related protein 65 118 5.9E-8 T 25-04-2016 IPR021096 Vibrio phage VSK, Orf152 SMD_RS11385 eed9e9cbc00a6128c12f57aa798938a8 127 SUPERFAMILY SSF47413 2 59 7.51E-7 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS11385 eed9e9cbc00a6128c12f57aa798938a8 127 Gene3D G3DSA:1.10.260.40 3 58 3.5E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 SUPERFAMILY SSF55486 45 716 1.32E-175 T 25-04-2016 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 PANTHER PTHR11804:SF47 36 717 0.0 T 25-04-2016 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 Gene3D G3DSA:1.10.1370.10 542 717 4.6E-116 T 25-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 Gene3D G3DSA:1.10.1370.10 178 389 4.6E-116 T 25-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 Pfam PF01432 Peptidase family M3 264 716 5.2E-128 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 Gene3D G3DSA:3.40.390.10 399 541 1.5E-48 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 Gene3D G3DSA:1.20.1050.40 49 177 3.7E-15 T 25-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SMD_RS14620 4a22a339eb249bb550d675b447b85f54 722 PANTHER PTHR11804 36 717 0.0 T 25-04-2016 SMD_RS20330 b9579641f73cead5502e6b5c9b29c22d 168 PIRSF PIRSF019239 8 168 3.1E-41 T 25-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SMD_RS20330 b9579641f73cead5502e6b5c9b29c22d 168 Pfam PF01899 Na+/H+ ion antiporter subunit 19 166 2.7E-41 T 25-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SMD_RS20330 b9579641f73cead5502e6b5c9b29c22d 168 PANTHER PTHR34584:SF1 10 168 5.2E-36 T 25-04-2016 SMD_RS20330 b9579641f73cead5502e6b5c9b29c22d 168 PANTHER PTHR34584 10 168 5.2E-36 T 25-04-2016 SMD_RS14505 a2ba4916c93d124e5a07018fb9e5d998 186 Pfam PF03358 NADPH-dependent FMN reductase 5 149 4.3E-39 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMD_RS14505 a2ba4916c93d124e5a07018fb9e5d998 186 PANTHER PTHR30543:SF6 1 182 1.2E-61 T 25-04-2016 SMD_RS14505 a2ba4916c93d124e5a07018fb9e5d998 186 PANTHER PTHR30543 1 182 1.2E-61 T 25-04-2016 SMD_RS14505 a2ba4916c93d124e5a07018fb9e5d998 186 SUPERFAMILY SSF52218 4 175 6.37E-49 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS14505 a2ba4916c93d124e5a07018fb9e5d998 186 Gene3D G3DSA:3.40.50.360 3 180 1.6E-50 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 57 270 2.3E-62 T 25-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 35 117 1.3E-14 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 Gene3D G3DSA:1.10.287.90 36 123 2.2E-23 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 206 254 - T 25-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 SUPERFAMILY SSF49503 131 275 5.22E-55 T 25-04-2016 IPR008972 Cupredoxin SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PANTHER PTHR22888:SF2 1 280 7.8E-117 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 205 225 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 225 242 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 129 148 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 107 127 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 95 107 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 181 202 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 243 260 1.57E-43 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 133 261 8.2E-40 T 25-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 SUPERFAMILY SSF81464 28 127 6.7E-24 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 PANTHER PTHR22888 1 280 7.8E-117 T 25-04-2016 SMD_RS02025 645708b2a89ceae6e9a927ba51cd111a 317 Gene3D G3DSA:2.60.40.420 124 279 2.2E-57 T 25-04-2016 IPR008972 Cupredoxin SMD_RS14905 932a9d9eb55a3f24c6d88d97ce69a872 418 PANTHER PTHR10859:SF92 56 403 7.3E-113 T 25-04-2016 SMD_RS14905 932a9d9eb55a3f24c6d88d97ce69a872 418 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 10 416 9.8E-188 T 25-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- SMD_RS14905 932a9d9eb55a3f24c6d88d97ce69a872 418 Gene3D G3DSA:3.90.550.10 53 298 2.6E-43 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS14905 932a9d9eb55a3f24c6d88d97ce69a872 418 Pfam PF13641 Glycosyltransferase like family 2 53 276 2.0E-35 T 25-04-2016 SMD_RS14905 932a9d9eb55a3f24c6d88d97ce69a872 418 SUPERFAMILY SSF53448 40 327 1.25E-61 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS14905 932a9d9eb55a3f24c6d88d97ce69a872 418 PANTHER PTHR10859 56 403 7.3E-113 T 25-04-2016 SMD_RS18140 5704a37288fa6ee8ddceda0e50b5d49f 242 PANTHER PTHR30572 7 228 4.0E-53 T 25-04-2016 SMD_RS18140 5704a37288fa6ee8ddceda0e50b5d49f 242 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 205 7.4E-33 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS18140 5704a37288fa6ee8ddceda0e50b5d49f 242 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 16 224 1.7E-88 T 25-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 SMD_RS18140 5704a37288fa6ee8ddceda0e50b5d49f 242 PANTHER PTHR30572:SF11 7 228 4.0E-53 T 25-04-2016 SMD_RS16290 830ef67475fa6180df6490c9f9c2818c 74 PANTHER PTHR38453:SF1 2 74 1.2E-42 T 25-04-2016 SMD_RS16290 830ef67475fa6180df6490c9f9c2818c 74 PANTHER PTHR38453 2 74 1.2E-42 T 25-04-2016 SMD_RS16290 830ef67475fa6180df6490c9f9c2818c 74 Pfam PF04328 Protein of unknown function (DUF466) 14 74 1.6E-25 T 25-04-2016 IPR007423 Protein of unknown function DUF466 SMD_RS19100 c32fdc04c515edac00fa19e25a03eaa3 128 Pfam PF13180 PDZ domain 44 104 4.2E-7 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS19100 c32fdc04c515edac00fa19e25a03eaa3 128 Gene3D G3DSA:2.30.42.10 45 109 5.5E-10 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS19100 c32fdc04c515edac00fa19e25a03eaa3 128 SUPERFAMILY SSF50156 45 104 3.29E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMD_RS17365 7fdca409a1892121265a855e41fd5374 160 Pfam PF12098 Protein of unknown function (DUF3574) 51 160 4.4E-36 T 25-04-2016 IPR021957 Protein of unknown function DUF3574 SMD_RS19945 7f6d494a82443939a5878ddae6760462 255 Pfam PF11906 Protein of unknown function (DUF3426) 111 254 1.6E-32 T 25-04-2016 IPR021834 Protein of unknown function DUF3426 SMD_RS02355 6655ea157e02d6e98f26febe06f798b3 381 Gene3D G3DSA:2.130.10.10 46 256 5.1E-23 T 25-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMD_RS02355 6655ea157e02d6e98f26febe06f798b3 381 SUPERFAMILY SSF50974 98 362 2.88E-34 T 25-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SMD_RS02355 6655ea157e02d6e98f26febe06f798b3 381 Gene3D G3DSA:2.120.10.30 257 361 3.3E-11 T 25-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SMD_RS02355 6655ea157e02d6e98f26febe06f798b3 381 SUPERFAMILY SSF50974 5 134 9.15E-9 T 25-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SMD_RS00375 990147f85fbc281cfd51273f2693b725 1310 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1057 1134 6.3E-20 T 25-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SMD_RS00375 990147f85fbc281cfd51273f2693b725 1310 PANTHER PTHR11219 996 1186 2.5E-20 T 25-04-2016 SMD_RS00375 990147f85fbc281cfd51273f2693b725 1310 PANTHER PTHR11219:SF46 996 1186 2.5E-20 T 25-04-2016 SMD_RS07860 0afc73f4a79cb49290ce4beb7d14f798 133 SUPERFAMILY SSF82693 37 117 2.62E-23 T 25-04-2016 SMD_RS07860 0afc73f4a79cb49290ce4beb7d14f798 133 Pfam PF00873 AcrB/AcrD/AcrF family 4 119 4.0E-33 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMD_RS07860 0afc73f4a79cb49290ce4beb7d14f798 133 PANTHER PTHR32063:SF11 1 116 2.8E-59 T 25-04-2016 SMD_RS07860 0afc73f4a79cb49290ce4beb7d14f798 133 PANTHER PTHR32063 1 116 2.8E-59 T 25-04-2016 SMD_RS07860 0afc73f4a79cb49290ce4beb7d14f798 133 Gene3D G3DSA:3.30.70.1430 36 117 9.7E-27 T 25-04-2016 SMD_RS04370 57a1e39c184305f2f94ce4a15af64dc1 152 Pfam PF07486 Cell Wall Hydrolase 35 142 2.3E-17 T 25-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 ProSitePatterns PS00935 Glyoxalase I signature 2. 112 128 - T 25-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 168 7.8E-24 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 PANTHER PTHR10374:SF16 11 171 2.3E-89 T 25-04-2016 SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 Gene3D G3DSA:3.10.180.10 12 170 1.6E-59 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 17 170 1.1E-46 T 25-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 SUPERFAMILY SSF54593 22 170 1.88E-33 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS19060 956fa2005c3c879674b49b9fdbce0369 171 PANTHER PTHR10374 11 171 2.3E-89 T 25-04-2016 SMD_RS19970 5f2a04a9170b0c5c1fa3178aa789ce74 442 Pfam PF00782 Dual specificity phosphatase, catalytic domain 349 434 5.7E-7 T 25-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 SMD_RS19970 5f2a04a9170b0c5c1fa3178aa789ce74 442 SUPERFAMILY SSF52799 295 434 3.4E-15 T 25-04-2016 IPR029021 Protein-tyrosine phosphatase-like SMD_RS19970 5f2a04a9170b0c5c1fa3178aa789ce74 442 PANTHER PTHR10159 69 436 1.7E-26 T 25-04-2016 IPR024950 Dual specificity phosphatase SMD_RS19970 5f2a04a9170b0c5c1fa3178aa789ce74 442 SMART SM00195 309 440 6.2E-4 T 25-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 SMD_RS19970 5f2a04a9170b0c5c1fa3178aa789ce74 442 PANTHER PTHR10159:SF370 69 436 1.7E-26 T 25-04-2016 SMD_RS19970 5f2a04a9170b0c5c1fa3178aa789ce74 442 Gene3D G3DSA:3.90.190.10 299 433 3.5E-12 T 25-04-2016 IPR029021 Protein-tyrosine phosphatase-like SMD_RS00430 67f713823fc75077ea713352f3957158 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 38.455 T 25-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SMD_RS00430 67f713823fc75077ea713352f3957158 301 Pfam PF04381 Putative exonuclease, RdgC 1 296 2.8E-96 T 25-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 SUPERFAMILY SSF55486 53 697 1.65E-208 T 25-04-2016 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 Pfam PF05649 Peptidase family M13 63 439 8.6E-96 T 25-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 PANTHER PTHR11733 54 697 1.1E-214 T 25-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 8.2E-22 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 522 538 8.2E-22 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 513 8.2E-22 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 593 604 8.2E-22 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 PANTHER PTHR11733:SF65 54 697 1.1E-214 T 25-04-2016 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 Pfam PF01431 Peptidase family M13 491 694 2.7E-68 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 Gene3D G3DSA:3.40.390.10 482 697 6.7E-107 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS06660 6d91e24ad6870979152b8ba38c39e73f 697 Gene3D G3DSA:3.40.390.10 321 442 6.7E-107 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMD_RS14850 f0195078a992b737bae6fb0873cbec1b 114 PANTHER PTHR12962:SF1 24 112 3.9E-28 T 25-04-2016 SMD_RS14850 f0195078a992b737bae6fb0873cbec1b 114 PANTHER PTHR12962 24 112 3.9E-28 T 25-04-2016 SMD_RS14850 f0195078a992b737bae6fb0873cbec1b 114 Pfam PF06961 Protein of unknown function (DUF1294) 36 90 3.5E-25 T 25-04-2016 IPR010718 Protein of unknown function DUF1294 SMD_RS13300 46a3243296fb09d9ecb9727426cca57a 259 SUPERFAMILY SSF54197 28 247 1.0E-62 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMD_RS13300 46a3243296fb09d9ecb9727426cca57a 259 PIRSF PIRSF001273 3 252 3.6E-63 T 25-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 SMD_RS13300 46a3243296fb09d9ecb9727426cca57a 259 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 28 247 7.3E-71 T 25-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 SMD_RS13300 46a3243296fb09d9ecb9727426cca57a 259 Gene3D G3DSA:3.30.428.30 25 248 6.2E-66 T 25-04-2016 SMD_RS16760 1588bd9348ef22d1c006037288562081 445 SUPERFAMILY SSF52738 270 437 1.83E-19 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS16760 1588bd9348ef22d1c006037288562081 445 Gene3D G3DSA:3.40.50.180 269 437 2.1E-15 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS16760 1588bd9348ef22d1c006037288562081 445 Pfam PF01339 CheB methylesterase 270 421 9.9E-13 T 25-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMD_RS00985 8fa8afccfec96edbf971839f4821b16f 189 PANTHER PTHR36122 1 183 4.3E-50 T 25-04-2016 SMD_RS00985 8fa8afccfec96edbf971839f4821b16f 189 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 183 2.5E-21 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SMD_RS00985 8fa8afccfec96edbf971839f4821b16f 189 PANTHER PTHR36122:SF1 1 183 4.3E-50 T 25-04-2016 SMD_RS00985 8fa8afccfec96edbf971839f4821b16f 189 Pfam PF04973 Nicotinamide mononucleotide transporter 2 178 3.3E-47 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SMD_RS01670 4733e493d4546816a0f981c5bb4198a7 440 Pfam PF02687 FtsX-like permease family 313 431 1.4E-11 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS01670 4733e493d4546816a0f981c5bb4198a7 440 Pfam PF12704 MacB-like periplasmic core domain 74 279 7.7E-15 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS01670 4733e493d4546816a0f981c5bb4198a7 440 PANTHER PTHR30572:SF12 14 440 2.5E-185 T 25-04-2016 SMD_RS01670 4733e493d4546816a0f981c5bb4198a7 440 PANTHER PTHR30572 14 440 2.5E-185 T 25-04-2016 SMD_RS04525 683e11341e3eab9fcd3ae5625db12df9 334 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 327 2.8E-105 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS04525 683e11341e3eab9fcd3ae5625db12df9 334 SMART SM01329 4 330 1.3E-179 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS04525 683e11341e3eab9fcd3ae5625db12df9 334 SUPERFAMILY SSF53659 1 334 4.22E-126 T 25-04-2016 SMD_RS04525 683e11341e3eab9fcd3ae5625db12df9 334 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMD_RS04525 683e11341e3eab9fcd3ae5625db12df9 334 PANTHER PTHR11835 2 334 2.7E-174 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMD_RS04525 683e11341e3eab9fcd3ae5625db12df9 334 Gene3D G3DSA:3.40.718.10 1 334 2.6E-135 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMD_RS21480 e5599e98d8300dbbd1ac31b3c45e8e22 417 SUPERFAMILY SSF56954 7 410 1.74E-61 T 25-04-2016 SMD_RS21480 e5599e98d8300dbbd1ac31b3c45e8e22 417 Gene3D G3DSA:1.20.1600.10 47 409 9.3E-49 T 25-04-2016 SMD_RS21480 e5599e98d8300dbbd1ac31b3c45e8e22 417 Pfam PF02321 Outer membrane efflux protein 56 212 5.7E-18 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS21480 e5599e98d8300dbbd1ac31b3c45e8e22 417 Pfam PF02321 Outer membrane efflux protein 245 407 1.4E-22 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS21480 e5599e98d8300dbbd1ac31b3c45e8e22 417 PANTHER PTHR30203 7 409 1.1E-32 T 25-04-2016 SMD_RS12745 7abc7618fb1d7bad0247e2774c7c791f 188 Pfam PF12804 MobA-like NTP transferase domain 13 156 3.0E-24 T 25-04-2016 IPR025877 MobA-like NTP transferase SMD_RS12745 7abc7618fb1d7bad0247e2774c7c791f 188 PANTHER PTHR19136:SF81 1 186 1.2E-19 T 25-04-2016 SMD_RS12745 7abc7618fb1d7bad0247e2774c7c791f 188 SUPERFAMILY SSF53448 10 183 2.1E-24 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS12745 7abc7618fb1d7bad0247e2774c7c791f 188 Gene3D G3DSA:3.90.550.10 10 185 7.5E-31 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS12745 7abc7618fb1d7bad0247e2774c7c791f 188 PANTHER PTHR19136 1 186 1.2E-19 T 25-04-2016 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 SUPERFAMILY SSF51556 97 415 1.75E-30 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 PANTHER PTHR11271 13 451 2.6E-37 T 25-04-2016 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 Gene3D G3DSA:2.30.40.10 33 156 1.5E-38 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 Pfam PF01979 Amidohydrolase family 382 431 7.5E-11 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 SUPERFAMILY SSF51338 35 98 3.54E-27 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 SUPERFAMILY SSF51338 414 455 3.54E-27 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 PANTHER PTHR11271:SF39 13 451 2.6E-37 T 25-04-2016 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 Gene3D G3DSA:2.30.40.10 315 354 3.9E-25 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS18470 6a6700d9e396a2ee3198423b698edb5d 469 Gene3D G3DSA:2.30.40.10 390 451 3.9E-25 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMD_RS03075 7054fe1c76844ec6d7f986aeee356d5b 165 SUPERFAMILY SSF55729 10 153 5.57E-34 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS03075 7054fe1c76844ec6d7f986aeee356d5b 165 PANTHER PTHR23091 5 154 4.8E-33 T 25-04-2016 SMD_RS03075 7054fe1c76844ec6d7f986aeee356d5b 165 Gene3D G3DSA:3.40.630.30 5 140 9.5E-34 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS03075 7054fe1c76844ec6d7f986aeee356d5b 165 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 19 150 7.4E-39 T 25-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SMD_RS03075 7054fe1c76844ec6d7f986aeee356d5b 165 PANTHER PTHR23091:SF247 5 154 4.8E-33 T 25-04-2016 SMD_RS03075 7054fe1c76844ec6d7f986aeee356d5b 165 Pfam PF00583 Acetyltransferase (GNAT) family 54 128 4.0E-15 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS03265 2b60dd6ad19251fa1f8a0d832df00423 321 Pfam PF14488 Domain of unknown function (DUF4434) 30 196 3.1E-41 T 25-04-2016 IPR027849 Protein of unknown function DUF4434 SMD_RS04950 5fb1b71f2c8151a806f2a3d381df5216 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 36.834 T 25-04-2016 IPR022892 Ribonuclease H GO:0004523 SMD_RS04950 5fb1b71f2c8151a806f2a3d381df5216 150 PANTHER PTHR10642 3 148 3.7E-54 T 25-04-2016 SMD_RS04950 5fb1b71f2c8151a806f2a3d381df5216 150 Pfam PF00075 RNase H 4 140 6.8E-47 T 25-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SMD_RS04950 5fb1b71f2c8151a806f2a3d381df5216 150 SUPERFAMILY SSF53098 3 140 7.59E-55 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS04950 5fb1b71f2c8151a806f2a3d381df5216 150 Gene3D G3DSA:3.30.420.10 3 143 1.2E-56 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS00135 79d94cc5be8ebde46fe4c69aad469f45 282 Pfam PF02517 CAAX protease self-immunity 172 271 2.8E-20 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SMD_RS00135 79d94cc5be8ebde46fe4c69aad469f45 282 PANTHER PTHR36435:SF1 21 280 9.2E-31 T 25-04-2016 SMD_RS00135 79d94cc5be8ebde46fe4c69aad469f45 282 PANTHER PTHR36435 21 280 9.2E-31 T 25-04-2016 SMD_RS15620 db05940c3b0a74a313873c7dd5a91a7c 280 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 44.817 T 25-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMD_RS15620 db05940c3b0a74a313873c7dd5a91a7c 280 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 1.1E-53 T 25-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMD_RS15620 db05940c3b0a74a313873c7dd5a91a7c 280 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 2.7E-61 T 25-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMD_RS15620 db05940c3b0a74a313873c7dd5a91a7c 280 PANTHER PTHR10067 6 279 2.9E-91 T 25-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMD_RS12165 2e738b5930d9702fb12862698830d230 308 Pfam PF13748 ABC transporter transmembrane region 23 259 1.8E-95 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS12165 2e738b5930d9702fb12862698830d230 308 SUPERFAMILY SSF90123 23 295 1.44E-14 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMD_RS12165 2e738b5930d9702fb12862698830d230 308 Gene3D G3DSA:1.20.1560.10 23 288 3.9E-8 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 Gene3D G3DSA:2.170.130.10 27 170 4.6E-31 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 Pfam PF00593 TonB dependent receptor 582 927 8.6E-27 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 Gene3D G3DSA:2.40.170.20 462 929 1.4E-66 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 Gene3D G3DSA:2.40.170.20 171 233 1.4E-66 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 Gene3D G3DSA:2.40.170.20 280 423 1.4E-66 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 PANTHER PTHR30069:SF7 308 782 2.4E-107 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 PANTHER PTHR30069:SF7 1 280 2.4E-107 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 PANTHER PTHR30069 308 782 2.4E-107 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 PANTHER PTHR30069 1 280 2.4E-107 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 SUPERFAMILY SSF56935 382 442 1.98E-85 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 SUPERFAMILY SSF56935 481 696 1.98E-85 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 SUPERFAMILY SSF56935 37 235 1.98E-85 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 SUPERFAMILY SSF56935 727 929 1.98E-85 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 SUPERFAMILY SSF56935 305 353 1.98E-85 T 25-04-2016 SMD_RS15725 776afc7d3869b9ad8da8b00bde8f9fe2 929 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 168 2.4E-21 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS21730 c7bc2e8d8b5423bc861725a0b2612900 395 PANTHER PTHR30199 3 392 3.4E-172 T 25-04-2016 SMD_RS21730 c7bc2e8d8b5423bc861725a0b2612900 395 Pfam PF03594 Benzoate membrane transport protein 12 387 2.7E-144 T 25-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 SMD_RS21730 c7bc2e8d8b5423bc861725a0b2612900 395 TIGRFAM TIGR00843 benE: benzoate transporter 14 389 8.3E-135 T 25-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 SMD_RS21730 c7bc2e8d8b5423bc861725a0b2612900 395 PANTHER PTHR30199:SF0 3 392 3.4E-172 T 25-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 SMD_RS19915 c6d926c8803986860fd4c5fb180900f7 141 Pfam PF07007 Protein of unknown function (DUF1311) 33 134 4.9E-13 T 25-04-2016 IPR009739 Protein of unknown function DUF1311 SMD_RS14110 007b93bde611cff961090d880db76302 260 Gene3D G3DSA:3.40.50.1110 51 248 1.8E-52 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS14110 007b93bde611cff961090d880db76302 260 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 80 243 8.9E-33 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS14110 007b93bde611cff961090d880db76302 260 PANTHER PTHR30383 77 257 1.0E-28 T 25-04-2016 SMD_RS14110 007b93bde611cff961090d880db76302 260 SUPERFAMILY SSF52266 61 251 3.36E-51 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMD_RS13190 98242314b9583df0da67aa97ef4c1c59 236 SUPERFAMILY SSF57997 136 218 1.05E-5 T 25-04-2016 SMD_RS13190 98242314b9583df0da67aa97ef4c1c59 236 Pfam PF11180 Protein of unknown function (DUF2968) 39 211 3.2E-64 T 25-04-2016 IPR021350 Protein of unknown function DUF2968 SMD_RS13190 98242314b9583df0da67aa97ef4c1c59 236 Gene3D G3DSA:1.20.58.120 106 208 4.1E-4 T 25-04-2016 IPR003103 BAG domain GO:0051087 SMD_RS16875 5aeac50fa00d956951ae33ba2056908d 101 Pfam PF13453 Transcription factor zinc-finger 3 43 1.5E-21 T 25-04-2016 IPR027392 Transcription factor zinc-finger SMD_RS01170 db73fb7eb0a5c69dac176ae0024a3e34 148 SUPERFAMILY SSF52304 1 135 6.28E-14 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS01170 db73fb7eb0a5c69dac176ae0024a3e34 148 Gene3D G3DSA:3.40.50.9100 3 135 3.4E-11 T 25-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 Gene3D G3DSA:3.30.465.10 321 423 5.3E-28 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 SMART SM01091 343 425 5.4E-29 T 25-04-2016 IPR005170 Transporter-associated domain SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 Gene3D G3DSA:3.10.580.10 195 320 5.3E-20 T 25-04-2016 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 Pfam PF01595 Domain of unknown function DUF21 3 194 7.9E-47 T 25-04-2016 IPR002550 Domain of unknown function DUF21 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 SUPERFAMILY SSF54631 196 328 3.42E-27 T 25-04-2016 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 SUPERFAMILY SSF56176 338 423 9.0E-23 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 PANTHER PTHR22777:SF8 2 431 2.0E-184 T 25-04-2016 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 Pfam PF00571 CBS domain 278 327 4.1E-7 T 25-04-2016 IPR000644 CBS domain SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 Pfam PF00571 CBS domain 212 265 0.0032 T 25-04-2016 IPR000644 CBS domain SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 PANTHER PTHR22777 2 431 2.0E-184 T 25-04-2016 SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 SMART SM00116 279 327 0.016 T 25-04-2016 IPR000644 CBS domain SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 SMART SM00116 218 267 52.0 T 25-04-2016 IPR000644 CBS domain SMD_RS08710 c1a93e918e68044599dbae51a47c83cb 434 Pfam PF03471 Transporter associated domain 345 423 2.8E-20 T 25-04-2016 IPR005170 Transporter-associated domain SMD_RS13105 14e35605bebf6277f4ee73962fe29e2a 275 Gene3D G3DSA:3.40.50.150 50 256 6.5E-32 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS13105 14e35605bebf6277f4ee73962fe29e2a 275 PANTHER PTHR10108 28 205 7.5E-24 T 25-04-2016 SMD_RS13105 14e35605bebf6277f4ee73962fe29e2a 275 SUPERFAMILY SSF53335 29 212 7.77E-33 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS13105 14e35605bebf6277f4ee73962fe29e2a 275 PANTHER PTHR10108:SF855 28 205 7.5E-24 T 25-04-2016 SMD_RS13105 14e35605bebf6277f4ee73962fe29e2a 275 Pfam PF13649 Methyltransferase domain 51 143 2.0E-18 T 25-04-2016 SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 SUPERFAMILY SSF103088 165 276 9.94E-21 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 Gene3D G3DSA:3.30.1330.60 168 277 7.1E-19 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 PANTHER PTHR30329:SF2 1 300 2.6E-127 T 25-04-2016 SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 PANTHER PTHR30329 1 300 2.6E-127 T 25-04-2016 SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 64 1.7E-20 T 25-04-2016 IPR025713 Motility protein B, N-terminal domain SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 PRINTS PR01021 OMPA domain signature 222 238 2.6E-5 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 PRINTS PR01021 OMPA domain signature 174 196 2.6E-5 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMD_RS02635 7fcdbe01e25e9f10bebed3bd32bfb53a 316 Pfam PF00691 OmpA family 173 258 6.0E-15 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS20435 ec7dbaf86999ca8706099bbbe1a51227 308 Pfam PF05661 Protein of unknown function (DUF808) 4 297 2.8E-112 T 25-04-2016 IPR008526 Inner membrane protein YedI SMD_RS20435 ec7dbaf86999ca8706099bbbe1a51227 308 PANTHER PTHR30503 2 307 6.9E-94 T 25-04-2016 SMD_RS20435 ec7dbaf86999ca8706099bbbe1a51227 308 PIRSF PIRSF016660 1 308 4.1E-114 T 25-04-2016 IPR008526 Inner membrane protein YedI SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 6.2E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 6.2E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 163 6.2E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 6.2E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 156 0.0014 T 25-04-2016 SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 Gene3D G3DSA:3.40.50.720 1 199 2.3E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 SUPERFAMILY SSF51735 2 183 1.51E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PANTHER PTHR24322:SF551 125 156 6.0E-15 T 25-04-2016 SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PANTHER PTHR24322:SF551 5 109 6.0E-15 T 25-04-2016 SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PANTHER PTHR24322 125 156 6.0E-15 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 PANTHER PTHR24322 5 109 6.0E-15 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS05315 eec96af2b9a0c00389b5bd8b2cf90524 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 182 1.3E-18 T 25-04-2016 SMD_RS08130 f0c09eb7b894e9c09336441a75f03c24 116 Pfam PF02411 MerT mercuric transport protein 1 116 9.9E-60 T 25-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 SMD_RS15980 cf5b8f83f3a51c7d4e36d07a4f75837a 134 SUPERFAMILY SSF54593 8 132 3.09E-30 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS15980 cf5b8f83f3a51c7d4e36d07a4f75837a 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 129 1.1E-19 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMD_RS15980 cf5b8f83f3a51c7d4e36d07a4f75837a 134 Gene3D G3DSA:3.10.180.10 13 132 1.4E-31 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS17725 840afaee641ec25068cf0236db36b3c4 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 4 83 3.1E-27 T 25-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SMD_RS17725 840afaee641ec25068cf0236db36b3c4 101 Gene3D G3DSA:1.10.260.40 3 90 1.0E-26 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS17725 840afaee641ec25068cf0236db36b3c4 101 PANTHER PTHR36924:SF2 1 101 2.9E-18 T 25-04-2016 SMD_RS17725 840afaee641ec25068cf0236db36b3c4 101 PANTHER PTHR36924 1 101 2.9E-18 T 25-04-2016 SMD_RS17725 840afaee641ec25068cf0236db36b3c4 101 SUPERFAMILY SSF47413 8 91 2.25E-20 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS00140 6e528c7343e4096820b7d8aedbcade53 268 Gene3D G3DSA:3.30.2010.10 57 141 4.3E-18 T 25-04-2016 SMD_RS00140 6e528c7343e4096820b7d8aedbcade53 268 PANTHER PTHR22726 4 260 4.1E-71 T 25-04-2016 SMD_RS00140 6e528c7343e4096820b7d8aedbcade53 268 Pfam PF01435 Peptidase family M48 61 246 8.2E-37 T 25-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SMD_RS18085 3cca516003c644f34fa3754da95bd62b 220 SUPERFAMILY SSF56112 39 149 2.87E-14 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS18085 3cca516003c644f34fa3754da95bd62b 220 Gene3D G3DSA:1.10.510.10 99 151 3.0E-9 T 25-04-2016 SMD_RS01340 9e8afaa01c1dbefdd1977a24a8b1e65c 630 Pfam PF01734 Patatin-like phospholipase 14 63 1.1E-9 T 25-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SMD_RS01340 9e8afaa01c1dbefdd1977a24a8b1e65c 630 Pfam PF01734 Patatin-like phospholipase 289 398 5.0E-6 T 25-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SMD_RS01340 9e8afaa01c1dbefdd1977a24a8b1e65c 630 SUPERFAMILY SSF52151 383 403 9.42E-9 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS01340 9e8afaa01c1dbefdd1977a24a8b1e65c 630 SUPERFAMILY SSF52151 197 267 9.42E-9 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS01340 9e8afaa01c1dbefdd1977a24a8b1e65c 630 SUPERFAMILY SSF52151 305 347 9.42E-9 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS01340 9e8afaa01c1dbefdd1977a24a8b1e65c 630 SUPERFAMILY SSF52151 11 71 9.42E-9 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMD_RS19295 dea9f5a2c74c8a296b7767c93bdafd0e 101 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 12 33 2.5E-8 T 25-04-2016 IPR019626 Stress-induced protein, KGG, repeat SMD_RS19295 dea9f5a2c74c8a296b7767c93bdafd0e 101 PANTHER PTHR36569 7 67 1.7E-24 T 25-04-2016 SMD_RS19295 dea9f5a2c74c8a296b7767c93bdafd0e 101 PANTHER PTHR36569:SF2 7 67 1.7E-24 T 25-04-2016 SMD_RS05200 4a9aeeb573c4d7b6538cb9abdef78cf1 117 Pfam PF07238 PilZ domain 14 103 8.8E-8 T 25-04-2016 IPR009875 PilZ domain GO:0035438 SMD_RS12255 9f7cb7669b8982cc7b4636c3b7ae51d2 130 Pfam PF11528 Protein of unknown function (DUF3224) 7 124 4.8E-35 T 25-04-2016 IPR021607 Protein of unknown function DUF3224 SMD_RS12255 9f7cb7669b8982cc7b4636c3b7ae51d2 130 SUPERFAMILY SSF159238 2 127 1.18E-37 T 25-04-2016 IPR023159 SO1590-like domain SMD_RS12255 9f7cb7669b8982cc7b4636c3b7ae51d2 130 Gene3D G3DSA:2.40.350.10 2 128 2.0E-42 T 25-04-2016 IPR023159 SO1590-like domain SMD_RS05560 bd6ab69abfb8be990e05d7228b53db55 132 Pfam PF12836 Helix-hairpin-helix motif 46 109 9.0E-20 T 25-04-2016 SMD_RS05560 bd6ab69abfb8be990e05d7228b53db55 132 SUPERFAMILY SSF47781 43 111 9.89E-23 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMD_RS05560 bd6ab69abfb8be990e05d7228b53db55 132 PANTHER PTHR21180 45 121 2.7E-22 T 25-04-2016 SMD_RS05560 bd6ab69abfb8be990e05d7228b53db55 132 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 49 110 1.3E-22 T 25-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SMD_RS05560 bd6ab69abfb8be990e05d7228b53db55 132 Gene3D G3DSA:1.10.150.320 43 110 3.8E-17 T 25-04-2016 SMD_RS03925 f6d5a451d707cabb289ef808c7d6f130 106 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 4.2E-28 T 25-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 SMD_RS03925 f6d5a451d707cabb289ef808c7d6f130 106 PANTHER PTHR10160 8 90 2.1E-13 T 25-04-2016 SMD_RS03925 f6d5a451d707cabb289ef808c7d6f130 106 PANTHER PTHR10160:SF19 8 90 2.1E-13 T 25-04-2016 SMD_RS08925 ec1fb76d1a9d71c4e84e59df3bb475dc 340 Pfam PF04773 FecR protein 133 223 1.5E-15 T 25-04-2016 IPR006860 FecR protein SMD_RS08925 ec1fb76d1a9d71c4e84e59df3bb475dc 340 PANTHER PTHR30273 7 335 4.5E-39 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS08925 ec1fb76d1a9d71c4e84e59df3bb475dc 340 PANTHER PTHR30273:SF2 7 335 4.5E-39 T 25-04-2016 SMD_RS08925 ec1fb76d1a9d71c4e84e59df3bb475dc 340 PIRSF PIRSF018266 4 340 1.6E-57 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS08925 ec1fb76d1a9d71c4e84e59df3bb475dc 340 Pfam PF16220 Domain of unknown function (DUF4880) 16 56 3.6E-10 T 25-04-2016 IPR032623 FecR, N-terminal SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 PANTHER PTHR10264:SF51 4 306 1.5E-120 T 25-04-2016 IPR010201 HflK GO:0016021 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 PRINTS PR00721 Stomatin signature 71 93 1.9E-10 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 PRINTS PR00721 Stomatin signature 154 171 1.9E-10 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 PRINTS PR00721 Stomatin signature 119 140 1.9E-10 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 PRINTS PR00721 Stomatin signature 200 218 1.9E-10 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 PANTHER PTHR10264 4 306 1.5E-120 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 TIGRFAM TIGR01933 hflK: HflK protein 66 323 9.8E-99 T 25-04-2016 IPR010201 HflK GO:0016021 SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 SMART SM00244 64 224 4.3E-33 T 25-04-2016 IPR001107 Band 7 domain SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 SUPERFAMILY SSF117892 97 230 1.01E-20 T 25-04-2016 IPR001107 Band 7 domain SMD_RS16425 af01b542534d4cbe68873c9cdfa94efd 377 Pfam PF01145 SPFH domain / Band 7 family 69 240 3.5E-29 T 25-04-2016 IPR001107 Band 7 domain SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 SUPERFAMILY SSF52943 2 287 2.49E-93 T 25-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 Gene3D G3DSA:1.10.287.80 202 235 1.5E-38 T 25-04-2016 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 Gene3D G3DSA:1.10.287.80 19 60 1.5E-38 T 25-04-2016 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 Gene3D G3DSA:1.10.287.80 236 282 3.7E-30 T 25-04-2016 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 Pfam PF00231 ATP synthase 5 286 6.0E-92 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.0E-106 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 4.3E-37 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 4.3E-37 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 4.3E-37 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 4.3E-37 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 25-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 PANTHER PTHR11693 1 287 6.0E-125 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 Gene3D G3DSA:3.40.1380.10 63 192 1.0E-43 T 25-04-2016 SMD_RS19145 9891fc3f1931a5ff059c0347152f2efa 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.835 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMD_RS07050 5f1ce9b5471ac256f23551d962701f5f 176 PANTHER PTHR37089 24 176 1.8E-47 T 25-04-2016 SMD_RS07050 5f1ce9b5471ac256f23551d962701f5f 176 SMART SM00972 113 173 4.5E-18 T 25-04-2016 IPR007893 Spore coat protein U SMD_RS07050 5f1ce9b5471ac256f23551d962701f5f 176 Pfam PF05229 Spore Coat Protein U domain 27 173 1.0E-31 T 25-04-2016 IPR007893 Spore coat protein U SMD_RS07050 5f1ce9b5471ac256f23551d962701f5f 176 PANTHER PTHR37089:SF5 24 176 1.8E-47 T 25-04-2016 SMD_RS15700 cc5a358c037bb1ac203f2fda6a47f330 223 SUPERFAMILY SSF53474 2 223 2.07E-37 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS15700 cc5a358c037bb1ac203f2fda6a47f330 223 Gene3D G3DSA:3.40.50.1820 2 223 5.3E-40 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS15700 cc5a358c037bb1ac203f2fda6a47f330 223 Pfam PF01738 Dienelactone hydrolase family 15 221 6.0E-34 T 25-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SMD_RS15700 cc5a358c037bb1ac203f2fda6a47f330 223 PANTHER PTHR17630 14 222 5.5E-34 T 25-04-2016 SMD_RS12465 c7f5f5f50a1a38eea0e3ed03e8482ea8 138 Pfam PF10116 Protein required for attachment to host cells 10 136 1.4E-27 T 25-04-2016 IPR019291 Host attachment protein SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PANTHER PTHR10108:SF795 293 362 7.4E-87 T 25-04-2016 SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PANTHER PTHR10108:SF795 7 83 7.4E-87 T 25-04-2016 SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PANTHER PTHR10108 293 362 7.4E-87 T 25-04-2016 SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PANTHER PTHR10108 7 83 7.4E-87 T 25-04-2016 SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 Pfam PF02353 Mycolic acid cyclopropane synthetase 101 356 1.0E-83 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PIRSF PIRSF003085 5 365 6.9E-111 T 25-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 SUPERFAMILY SSF53335 106 358 2.52E-74 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PANTHER PTHR10108:SF795 105 277 7.4E-87 T 25-04-2016 SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 Gene3D G3DSA:3.40.50.150 100 358 5.3E-88 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS14625 f71bf2e9305704b13c736ad31e827f18 371 PANTHER PTHR10108 105 277 7.4E-87 T 25-04-2016 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 SMART SM00421 145 202 1.6E-19 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 PANTHER PTHR26402 1 206 5.2E-74 T 25-04-2016 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 Pfam PF00072 Response regulator receiver domain 3 114 9.5E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 SUPERFAMILY SSF46894 137 206 1.22E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 SMART SM00448 1 114 5.7E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 Gene3D G3DSA:3.40.50.2300 2 120 2.2E-34 T 25-04-2016 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 Gene3D G3DSA:1.10.10.10 121 206 5.6E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 4.5E-17 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 PANTHER PTHR26402:SF458 1 206 5.2E-74 T 25-04-2016 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.7E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.7E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.7E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMD_RS10875 b9c98c707d0ad0eeb5cba16085031fa7 210 SUPERFAMILY SSF52172 2 129 1.31E-33 T 25-04-2016 IPR011006 CheY-like superfamily SMD_RS14630 51197a8bb195fc3b823092f92e23569f 293 Gene3D G3DSA:3.30.565.40 98 159 2.5E-7 T 25-04-2016 IPR025303 Domain of unknown function DUF4163 SMD_RS14630 51197a8bb195fc3b823092f92e23569f 293 Pfam PF13739 Domain of unknown function (DUF4163) 97 156 1.8E-6 T 25-04-2016 IPR025303 Domain of unknown function DUF4163 SMD_RS14630 51197a8bb195fc3b823092f92e23569f 293 Pfam PF11738 Protein of unknown function (DUF3298) 251 275 1.7E-5 T 25-04-2016 IPR021729 Domain of unknown function DUF3298 SMD_RS14630 51197a8bb195fc3b823092f92e23569f 293 Gene3D G3DSA:3.90.640.20 251 287 4.2E-5 T 25-04-2016 IPR021729 Domain of unknown function DUF3298 SMD_RS05705 dfb4b3aa9322a267d2dcf8d3bb3263f1 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 140 2.9E-58 T 25-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 SMD_RS05705 dfb4b3aa9322a267d2dcf8d3bb3263f1 143 SUPERFAMILY SSF82784 2 133 1.24E-36 T 25-04-2016 IPR003718 OsmC/Ohr family SMD_RS05705 dfb4b3aa9322a267d2dcf8d3bb3263f1 143 Gene3D G3DSA:3.30.300.20 4 142 2.2E-49 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS05705 dfb4b3aa9322a267d2dcf8d3bb3263f1 143 Pfam PF02566 OsmC-like protein 42 138 6.7E-21 T 25-04-2016 IPR003718 OsmC/Ohr family SMD_RS05705 dfb4b3aa9322a267d2dcf8d3bb3263f1 143 PANTHER PTHR33797 1 143 8.9E-60 T 25-04-2016 SMD_RS05705 dfb4b3aa9322a267d2dcf8d3bb3263f1 143 PANTHER PTHR33797:SF1 1 143 8.9E-60 T 25-04-2016 SMD_RS02605 d146764d58ef780375f8b87aa655c4e3 262 Gene3D G3DSA:3.40.830.10 1 260 1.3E-95 T 25-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SMD_RS02605 d146764d58ef780375f8b87aa655c4e3 262 SUPERFAMILY SSF53213 3 260 1.83E-88 T 25-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SMD_RS02605 d146764d58ef780375f8b87aa655c4e3 262 PIRSF PIRSF006157 1 261 4.8E-85 T 25-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 SMD_RS02605 d146764d58ef780375f8b87aa655c4e3 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 235 2.0E-45 T 25-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SMD_RS02605 d146764d58ef780375f8b87aa655c4e3 262 PANTHER PTHR30096 1 262 4.2E-99 T 25-04-2016 SMD_RS03735 0bc765f3ab05af90c5d1ec32bfb92783 214 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 49 213 1.0E-56 T 25-04-2016 IPR009706 Protein of unknown function DUF1287 SMD_RS03735 0bc765f3ab05af90c5d1ec32bfb92783 214 Pfam PF06940 Domain of unknown function (DUF1287) 50 213 1.6E-65 T 25-04-2016 IPR009706 Protein of unknown function DUF1287 SMD_RS00155 a3c0566a4b9693335c9682c8ca1b1ee5 253 PANTHER PTHR30625 14 247 9.0E-61 T 25-04-2016 SMD_RS00155 a3c0566a4b9693335c9682c8ca1b1ee5 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 114 236 1.1E-36 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMD_RS00155 a3c0566a4b9693335c9682c8ca1b1ee5 253 PANTHER PTHR30625:SF3 14 247 9.0E-61 T 25-04-2016 SMD_RS11485 0c0ca0d36459f9a92ddce10ca6febcb4 208 PANTHER PTHR19136 4 204 2.7E-32 T 25-04-2016 SMD_RS11485 0c0ca0d36459f9a92ddce10ca6febcb4 208 Gene3D G3DSA:3.90.550.10 13 200 1.0E-29 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS11485 0c0ca0d36459f9a92ddce10ca6febcb4 208 PANTHER PTHR19136:SF78 4 204 2.7E-32 T 25-04-2016 SMD_RS11485 0c0ca0d36459f9a92ddce10ca6febcb4 208 SUPERFAMILY SSF53448 13 195 3.83E-27 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS11485 0c0ca0d36459f9a92ddce10ca6febcb4 208 Pfam PF12804 MobA-like NTP transferase domain 14 169 1.9E-28 T 25-04-2016 IPR025877 MobA-like NTP transferase SMD_RS01140 7c9eb2ac677e862c4b38e24409eb6c83 195 Gene3D G3DSA:3.40.50.150 8 193 6.5E-50 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS01140 7c9eb2ac677e862c4b38e24409eb6c83 195 Pfam PF01596 O-methyltransferase 28 160 3.6E-27 T 25-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 SMD_RS01140 7c9eb2ac677e862c4b38e24409eb6c83 195 PANTHER PTHR10509 32 193 8.1E-38 T 25-04-2016 SMD_RS01140 7c9eb2ac677e862c4b38e24409eb6c83 195 SUPERFAMILY SSF53335 22 193 7.21E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS06555 9ebc48baf9479522f779f24a28b300aa 70 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 58 5.6E-26 T 25-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 PANTHER PTHR21248 531 602 6.0E-155 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 Pfam PF13091 PLD-like domain 340 581 1.7E-12 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 Pfam PF13091 PLD-like domain 91 245 1.9E-19 T 25-04-2016 IPR025202 Phospholipase D-like domain SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 SUPERFAMILY SSF56024 40 255 2.92E-37 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 SMART SM00155 530 557 0.026 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 SMART SM00155 186 213 0.0015 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 Gene3D G3DSA:3.30.870.10 68 257 4.9E-38 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 Gene3D G3DSA:3.30.870.10 535 606 1.5E-33 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 Gene3D G3DSA:3.30.870.10 335 428 1.5E-33 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 SUPERFAMILY SSF56024 331 423 5.76E-24 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 SUPERFAMILY SSF56024 527 603 5.76E-24 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 PANTHER PTHR21248 77 418 6.0E-155 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 PANTHER PTHR21248:SF12 77 418 6.0E-155 T 25-04-2016 SMD_RS00615 4ff25b01022324a892faf78cc2971a38 685 PANTHER PTHR21248:SF12 531 602 6.0E-155 T 25-04-2016 SMD_RS22015 06e86fdcea97224dd86f0972e3a953ef 182 Pfam PF02321 Outer membrane efflux protein 7 170 3.1E-10 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMD_RS22015 06e86fdcea97224dd86f0972e3a953ef 182 Gene3D G3DSA:1.20.1600.10 2 172 6.0E-15 T 25-04-2016 SMD_RS22015 06e86fdcea97224dd86f0972e3a953ef 182 SUPERFAMILY SSF56954 2 172 3.92E-18 T 25-04-2016 SMD_RS15865 3f4b8a13fd8752d08a6e358179530b82 245 PANTHER PTHR34387:SF1 1 245 1.7E-56 T 25-04-2016 SMD_RS15865 3f4b8a13fd8752d08a6e358179530b82 245 PANTHER PTHR34387 1 245 1.7E-56 T 25-04-2016 SMD_RS15865 3f4b8a13fd8752d08a6e358179530b82 245 Pfam PF04402 Protein of unknown function (DUF541) 41 241 1.3E-52 T 25-04-2016 IPR007497 Protein of unknown function DUF541 SMD_RS12040 3d1507edbe7d20b3723c01b01eb18f3e 196 Pfam PF11747 Killing trait 11 73 1.8E-18 T 25-04-2016 IPR021070 Killing trait, RebB SMD_RS13415 698121c62f9052e43b18f4c5c6206ff8 469 Pfam PF00817 impB/mucB/samB family 24 148 4.8E-7 T 25-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS13415 698121c62f9052e43b18f4c5c6206ff8 469 SUPERFAMILY SSF56672 1 227 5.16E-32 T 25-04-2016 SMD_RS13415 698121c62f9052e43b18f4c5c6206ff8 469 PANTHER PTHR35369 1 469 2.4E-143 T 25-04-2016 SMD_RS13415 698121c62f9052e43b18f4c5c6206ff8 469 PANTHER PTHR35369:SF2 1 469 2.4E-143 T 25-04-2016 SMD_RS15480 213e11c0213da245a5e39ab1f4faceaf 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 4.6E-36 T 25-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SMD_RS15480 213e11c0213da245a5e39ab1f4faceaf 118 PANTHER PTHR11058 1 118 2.5E-76 T 25-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SMD_RS15480 213e11c0213da245a5e39ab1f4faceaf 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 19.15 T 25-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SMD_RS15480 213e11c0213da245a5e39ab1f4faceaf 118 PANTHER PTHR11058:SF10 1 118 2.5E-76 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 PANTHER PTHR30069 1 1007 4.5E-135 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 SUPERFAMILY SSF49464 25 125 1.29E-11 T 25-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 Gene3D G3DSA:2.40.170.20 340 898 3.1E-39 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 Gene3D G3DSA:2.40.170.20 960 1021 3.1E-39 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 Gene3D G3DSA:2.40.170.20 236 308 3.1E-39 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 SUPERFAMILY SSF56935 354 647 1.1E-57 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 SUPERFAMILY SSF56935 693 738 1.1E-57 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 SUPERFAMILY SSF56935 780 896 1.1E-57 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 SUPERFAMILY SSF56935 962 1021 1.1E-57 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 SUPERFAMILY SSF56935 112 315 1.1E-57 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 PANTHER PTHR30069:SF6 1 1007 4.5E-135 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 Pfam PF13620 Carboxypeptidase regulatory-like domain 26 106 5.4E-16 T 25-04-2016 SMD_RS07560 7ab187dd400f61fe3a8721004de6684c 1066 Gene3D G3DSA:2.60.40.1120 25 108 6.6E-10 T 25-04-2016 IPR014766 Carboxypeptidase, regulatory domain SMD_RS04470 e7de639217651336fef97529a44433c2 248 PANTHER PTHR34990 1 239 1.7E-115 T 25-04-2016 SMD_RS04470 e7de639217651336fef97529a44433c2 248 PANTHER PTHR34990:SF1 1 239 1.7E-115 T 25-04-2016 SMD_RS04470 e7de639217651336fef97529a44433c2 248 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 239 3.6E-105 T 25-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SMD_RS04470 e7de639217651336fef97529a44433c2 248 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 2.0E-10 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMD_RS04470 e7de639217651336fef97529a44433c2 248 Gene3D G3DSA:3.60.21.10 1 125 4.4E-24 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS04470 e7de639217651336fef97529a44433c2 248 Gene3D G3DSA:3.60.21.10 180 222 4.4E-24 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS04470 e7de639217651336fef97529a44433c2 248 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 248 120.728 T 25-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SMD_RS04470 e7de639217651336fef97529a44433c2 248 SUPERFAMILY SSF56300 1 230 4.27E-34 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 195 365 5.4E-29 T 25-04-2016 IPR020051 SagB-type dehydrogenase domain SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 PANTHER PTHR23026 171 202 2.6E-29 T 25-04-2016 SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 PANTHER PTHR23026 220 367 2.6E-29 T 25-04-2016 SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 TIGRFAM TIGR04511 SagB_rel_DH_2: putative peptide maturation dehydrogenase 3 378 2.2E-175 T 25-04-2016 IPR030965 Putative peptide maturation dehydrogenase SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 SUPERFAMILY SSF55469 171 247 9.11E-18 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 SUPERFAMILY SSF55469 277 372 9.11E-18 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 Pfam PF00881 Nitroreductase family 176 366 7.6E-21 T 25-04-2016 IPR029479 Nitroreductase SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 Gene3D G3DSA:3.40.109.10 164 367 1.4E-18 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 PANTHER PTHR23026:SF61 171 202 2.6E-29 T 25-04-2016 SMD_RS01225 5a3695e3ef3bdd92879ec1b65a4aa5cb 388 PANTHER PTHR23026:SF61 220 367 2.6E-29 T 25-04-2016 SMD_RS04925 87f75361b399241a844a7d84dc00b546 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 235 414 3.1E-57 T 25-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI SMD_RS02685 c63f32847f65353b0ccd357959b65f76 97 Pfam PF11607 Protein of unknown function (DUF3247) 1 92 1.4E-45 T 25-04-2016 IPR021649 Protein of unknown function DUF3247 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Pfam PF00580 UvrD/REP helicase N-terminal domain 540 657 2.3E-15 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Pfam PF00580 UvrD/REP helicase N-terminal domain 213 315 3.4E-15 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 SUPERFAMILY SSF52540 212 347 1.09E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 SUPERFAMILY SSF52540 557 861 1.09E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Pfam PF13361 UvrD-like helicase C-terminal domain 776 845 2.3E-15 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 3.5E-29 T 25-04-2016 IPR022161 DNA helicase IV, N-terminal domain SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Gene3D G3DSA:3.40.50.300 212 354 5.7E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Gene3D G3DSA:3.40.50.300 567 661 5.7E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 PANTHER PTHR11070:SF26 178 346 4.4E-74 T 25-04-2016 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 PANTHER PTHR11070:SF26 543 865 4.4E-74 T 25-04-2016 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 Gene3D G3DSA:3.40.50.300 670 861 8.9E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 PANTHER PTHR11070 178 346 4.4E-74 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS13955 b0e4a20c05c7741756e34023e178f042 917 PANTHER PTHR11070 543 865 4.4E-74 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMD_RS06570 3aaaf5aa0d568d7363eb549a14bbf977 354 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 138 319 4.4E-11 T 25-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition SMD_RS06570 3aaaf5aa0d568d7363eb549a14bbf977 354 Gene3D G3DSA:3.40.630.30 162 305 5.6E-9 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS06570 3aaaf5aa0d568d7363eb549a14bbf977 354 SUPERFAMILY SSF55729 162 328 3.36E-19 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS19495 bae0707f53e107798bcf2a2a59dbd7c9 149 SUPERFAMILY SSF54975 5 118 1.24E-21 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS19495 bae0707f53e107798bcf2a2a59dbd7c9 149 SMART SM01034 3 102 1.4E-10 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS19495 bae0707f53e107798bcf2a2a59dbd7c9 149 Pfam PF04940 Sensors of blue-light using FAD 5 101 3.7E-24 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS12290 50749044740a597eb69e6fd2ecb1fdca 289 SMART SM00849 57 245 3.1E-24 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS12290 50749044740a597eb69e6fd2ecb1fdca 289 PANTHER PTHR11935 12 237 3.0E-19 T 25-04-2016 SMD_RS12290 50749044740a597eb69e6fd2ecb1fdca 289 SUPERFAMILY SSF56281 32 248 4.59E-42 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS12290 50749044740a597eb69e6fd2ecb1fdca 289 Pfam PF00753 Metallo-beta-lactamase superfamily 60 245 2.6E-32 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS12290 50749044740a597eb69e6fd2ecb1fdca 289 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 101 121 - T 25-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 SMD_RS12290 50749044740a597eb69e6fd2ecb1fdca 289 Gene3D G3DSA:3.60.15.10 26 263 9.5E-48 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1104 11.14 T 25-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 PANTHER PTHR30591:SF1 2 1109 5.3E-239 T 25-04-2016 SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 Gene3D G3DSA:1.10.10.160 94 176 5.4E-15 T 25-04-2016 IPR013986 DExx box DNA helicase domain SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 784 5.5E-209 T 25-04-2016 SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1063 2.2E-301 T 25-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 SUPERFAMILY SSF52540 344 790 5.78E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 SUPERFAMILY SSF52980 800 1084 1.39E-52 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 PIRSF PIRSF000980 8 1105 0.0 T 25-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 SUPERFAMILY SSF52540 9 331 8.07E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS21840 def21aa417493b05e0a1dab37bcbc940 1114 PANTHER PTHR30591 2 1109 5.3E-239 T 25-04-2016 SMD_RS20320 dc30fb42d1f00fe9fc44a8b04702adc4 130 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 109 1.7E-23 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMD_RS20320 dc30fb42d1f00fe9fc44a8b04702adc4 130 PANTHER PTHR34583:SF1 1 120 4.9E-67 T 25-04-2016 SMD_RS20320 dc30fb42d1f00fe9fc44a8b04702adc4 130 PANTHER PTHR34583 1 120 4.9E-67 T 25-04-2016 SMD_RS17790 adc08eceafd4c02421b57ffe28910862 293 Pfam PF05137 Fimbrial assembly protein (PilN) 100 189 8.0E-27 T 25-04-2016 IPR007813 Fimbrial assembly PilN SMD_RS17790 adc08eceafd4c02421b57ffe28910862 293 PANTHER PTHR40278 1 207 2.1E-51 T 25-04-2016 SMD_RS17790 adc08eceafd4c02421b57ffe28910862 293 PANTHER PTHR40278:SF1 1 207 2.1E-51 T 25-04-2016 SMD_RS15550 539852e68ecce86ae9697553fac1a5d3 369 Pfam PF05816 Toxic anion resistance protein (TelA) 49 364 6.4E-72 T 25-04-2016 IPR008863 Toxic anion resistance SMD_RS15550 539852e68ecce86ae9697553fac1a5d3 369 PANTHER PTHR38432 21 365 3.1E-42 T 25-04-2016 SMD_RS15550 539852e68ecce86ae9697553fac1a5d3 369 PIRSF PIRSF026508 14 369 1.2E-92 T 25-04-2016 IPR008863 Toxic anion resistance SMD_RS08005 80c7fac199597e208b163e2b2fa3c14d 874 SUPERFAMILY SSF52540 82 214 1.84E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08005 80c7fac199597e208b163e2b2fa3c14d 874 SUPERFAMILY SSF52540 462 706 1.84E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08005 80c7fac199597e208b163e2b2fa3c14d 874 Pfam PF13476 AAA domain 91 219 7.3E-10 T 25-04-2016 SMD_RS08005 80c7fac199597e208b163e2b2fa3c14d 874 Gene3D G3DSA:3.40.1140.10 628 708 4.7E-25 T 25-04-2016 SMD_RS08005 80c7fac199597e208b163e2b2fa3c14d 874 Gene3D G3DSA:3.40.1140.10 80 173 4.7E-25 T 25-04-2016 SMD_RS09680 8eb87ad090a3a926da5a80fb4b356814 176 SUPERFAMILY SSF55729 5 167 1.54E-35 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09680 8eb87ad090a3a926da5a80fb4b356814 176 Pfam PF13420 Acetyltransferase (GNAT) domain 5 158 2.7E-27 T 25-04-2016 SMD_RS09680 8eb87ad090a3a926da5a80fb4b356814 176 Gene3D G3DSA:3.40.630.30 3 170 7.1E-43 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS09680 8eb87ad090a3a926da5a80fb4b356814 176 PANTHER PTHR23091 1 176 4.4E-37 T 25-04-2016 SMD_RS09680 8eb87ad090a3a926da5a80fb4b356814 176 PANTHER PTHR23091:SF225 1 176 4.4E-37 T 25-04-2016 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 Pfam PF00717 Peptidase S24-like 44 123 3.2E-14 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 100 112 4.0E-16 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 37 53 4.0E-16 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 159 178 4.0E-16 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 SUPERFAMILY SSF51306 38 199 2.27E-46 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 PANTHER PTHR12383:SF14 11 197 1.9E-38 T 25-04-2016 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 ProSitePatterns PS00761 Signal peptidases I signature 3. 164 177 - T 25-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 ProSitePatterns PS00501 Signal peptidases I serine active site. 46 53 - T 25-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 24 197 3.7E-36 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 Gene3D G3DSA:2.10.109.10 159 200 2.3E-36 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 Gene3D G3DSA:2.10.109.10 35 110 2.3E-36 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMD_RS01180 1cfe91a53b09315b7daba07d4e40bf5a 208 PANTHER PTHR12383 11 197 1.9E-38 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 Gene3D G3DSA:2.40.170.20 180 730 3.6E-118 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 162 4.1E-11 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 PANTHER PTHR32552 15 730 1.4E-173 T 25-04-2016 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 Gene3D G3DSA:2.170.130.10 40 172 9.7E-29 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 25-04-2016 IPR010917 TonB-dependent receptor, conserved site SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 PANTHER PTHR32552:SF37 15 730 1.4E-173 T 25-04-2016 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 SUPERFAMILY SSF56935 38 730 9.68E-113 T 25-04-2016 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 Pfam PF00593 TonB dependent receptor 490 729 3.8E-26 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06050 496e7df362879e8811758e65affe5ecf 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 730 4.2E-88 T 25-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SMD_RS07855 835f9834611206615f6138f3a9dd656e 487 PANTHER PTHR33375:SF2 24 479 6.6E-12 T 25-04-2016 SMD_RS07855 835f9834611206615f6138f3a9dd656e 487 PANTHER PTHR33375 24 479 6.6E-12 T 25-04-2016 SMD_RS12010 98dcb55b680801dd822e273ba71d5954 430 Pfam PF13557 Putative MetA-pathway of phenol degradation 189 375 3.6E-6 T 25-04-2016 IPR025737 MetA-pathway of phenol degradation, putative SMD_RS10945 43e2ee65cba57874cf550955413069ec 249 PANTHER PTHR30435:SF18 1 247 1.3E-92 T 25-04-2016 SMD_RS10945 43e2ee65cba57874cf550955413069ec 249 PANTHER PTHR30435 1 247 1.3E-92 T 25-04-2016 SMD_RS10945 43e2ee65cba57874cf550955413069ec 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 244 1.6E-20 T 25-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMD_RS10945 43e2ee65cba57874cf550955413069ec 249 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-7 T 25-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMD_RS10945 43e2ee65cba57874cf550955413069ec 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 122 3.4E-28 T 25-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMD_RS10945 43e2ee65cba57874cf550955413069ec 249 SUPERFAMILY SSF117143 77 206 3.01E-12 T 25-04-2016 SMD_RS02940 667b9ce0686f4f516dcf14191d056f8a 151 PANTHER PTHR32552 7 125 1.4E-58 T 25-04-2016 SMD_RS02940 667b9ce0686f4f516dcf14191d056f8a 151 SUPERFAMILY SSF53098 7 119 1.64E-27 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS02940 667b9ce0686f4f516dcf14191d056f8a 151 PANTHER PTHR32552:SF35 7 125 1.4E-58 T 25-04-2016 SMD_RS02940 667b9ce0686f4f516dcf14191d056f8a 151 Gene3D G3DSA:3.30.420.10 6 116 3.2E-30 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMD_RS02940 667b9ce0686f4f516dcf14191d056f8a 151 Pfam PF13683 Integrase core domain 49 115 4.8E-30 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS08415 ef83474ce7e923ee1f71e4371ebc66d5 177 Gene3D G3DSA:1.10.260.40 3 71 3.7E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS05185 7c25fc1e0611764dff9a9b1f009f4615 353 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 9 344 8.3E-82 T 25-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SMD_RS05185 7c25fc1e0611764dff9a9b1f009f4615 353 Pfam PF02618 YceG-like family 48 336 3.7E-75 T 25-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SMD_RS05185 7c25fc1e0611764dff9a9b1f009f4615 353 PANTHER PTHR30518:SF2 1 349 1.6E-87 T 25-04-2016 SMD_RS05185 7c25fc1e0611764dff9a9b1f009f4615 353 PANTHER PTHR30518 1 349 1.6E-87 T 25-04-2016 SMD_RS05185 7c25fc1e0611764dff9a9b1f009f4615 353 Gene3D G3DSA:3.30.160.60 308 346 2.7E-16 T 25-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SMD_RS18155 cbb5fd1dbe6ee19c8cded40b158f4209 85 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 8.6E-29 T 25-04-2016 IPR021250 Protein of unknown function DUF2789 SMD_RS21805 2032f7e5b18d44ab18a88b9584d09844 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 1.1E-22 T 25-04-2016 IPR012451 Protein of unknown function DUF1656 SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 Pfam PF01709 Transcriptional regulator 7 235 1.0E-85 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 236 6.8E-86 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 PANTHER PTHR12532:SF0 1 239 1.6E-100 T 25-04-2016 SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 Gene3D G3DSA:3.30.70.980 132 203 7.2E-22 T 25-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 32.921 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 Gene3D G3DSA:3.30.1270.10 79 131 3.2E-39 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 Gene3D G3DSA:3.30.1270.10 210 238 3.2E-39 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 PANTHER PTHR12532 1 239 1.6E-100 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 Gene3D G3DSA:1.10.10.200 7 75 2.6E-26 T 25-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SMD_RS17235 ab1e10bfea9565a48564fd862196bb29 243 SUPERFAMILY SSF75625 7 240 1.15E-85 T 25-04-2016 IPR029072 YebC-like SMD_RS15925 81b4522eec409ab4a721ba4189a12cd9 199 Pfam PF06197 Protein of unknown function (DUF998) 13 192 1.4E-12 T 25-04-2016 IPR009339 Protein of unknown function DUF998 SMD_RS13615 665e2f54a3b925ab166e5fad5ace2519 67 PANTHER PTHR33885 6 67 1.6E-23 T 25-04-2016 SMD_RS13615 665e2f54a3b925ab166e5fad5ace2519 67 Pfam PF04024 PspC domain 6 64 4.1E-21 T 25-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SMD_RS07840 a9d016e57723104e11c106cbeca7bb4b 100 PANTHER PTHR33169 1 92 2.3E-19 T 25-04-2016 SMD_RS07840 a9d016e57723104e11c106cbeca7bb4b 100 PANTHER PTHR33169:SF11 1 92 2.3E-19 T 25-04-2016 SMD_RS07840 a9d016e57723104e11c106cbeca7bb4b 100 SUPERFAMILY SSF46785 3 97 1.84E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07840 a9d016e57723104e11c106cbeca7bb4b 100 Pfam PF03551 Transcriptional regulator PadR-like family 15 83 3.3E-20 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal SMD_RS07840 a9d016e57723104e11c106cbeca7bb4b 100 Gene3D G3DSA:1.10.10.10 9 89 4.6E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS07930 541f71d3d950652bfaa8f2c1c078bda0 149 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 15 146 9.6E-53 T 25-04-2016 IPR022262 Lipoprotein, putative SMD_RS11965 d785484bead3c0164f5b0d77cc61407f 293 Gene3D G3DSA:2.130.10.10 40 226 6.8E-19 T 25-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMD_RS11965 d785484bead3c0164f5b0d77cc61407f 293 SUPERFAMILY SSF82171 44 177 2.94E-17 T 25-04-2016 SMD_RS11965 d785484bead3c0164f5b0d77cc61407f 293 Pfam PF07676 WD40-like Beta Propeller Repeat 87 124 2.4E-10 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS11965 d785484bead3c0164f5b0d77cc61407f 293 Pfam PF07676 WD40-like Beta Propeller Repeat 37 73 6.1E-4 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS11965 d785484bead3c0164f5b0d77cc61407f 293 Pfam PF07676 WD40-like Beta Propeller Repeat 139 177 7.6E-10 T 25-04-2016 IPR011659 WD40-like Beta Propeller SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 ProSitePatterns PS01047 Heavy-metal-associated domain. 32 61 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 80 94 3.1E-40 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 66 80 3.1E-40 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 24 35 3.1E-40 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 35 51 3.1E-40 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 6 24 3.1E-40 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 51 66 3.1E-40 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 5 95 2.8E-45 T 25-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 SUPERFAMILY SSF55008 21 93 3.4E-21 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 Gene3D G3DSA:3.30.70.100 25 92 1.6E-22 T 25-04-2016 SMD_RS08125 cb5205d98947b298ee31e9331525692a 95 Pfam PF00403 Heavy-metal-associated domain 29 89 2.1E-15 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMD_RS14200 0cf3c2af52dd53a4124d30787e400a8b 243 Pfam PF11218 Protein of unknown function (DUF3011) 37 240 4.6E-87 T 25-04-2016 IPR021381 Protein of unknown function DUF3011 SMD_RS13470 bfa5faba84d648e5ebc54d212e95c292 266 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 43 234 7.6E-35 T 25-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN SMD_RS13470 bfa5faba84d648e5ebc54d212e95c292 266 SUPERFAMILY SSF159501 24 262 4.24E-51 T 25-04-2016 SMD_RS13470 bfa5faba84d648e5ebc54d212e95c292 266 PIRSF PIRSF020419 5 265 6.9E-48 T 25-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted SMD_RS03605 d2f0c39f35a2719d609ce1ccf17696f1 355 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 170 1.1E-27 T 25-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SMD_RS03605 d2f0c39f35a2719d609ce1ccf17696f1 355 PANTHER PTHR40031 2 329 4.7E-87 T 25-04-2016 SMD_RS03605 d2f0c39f35a2719d609ce1ccf17696f1 355 PANTHER PTHR40031:SF1 2 329 4.7E-87 T 25-04-2016 SMD_RS03660 8d929a5ee30e5a9d68990cd67b95efbb 836 Pfam PF02687 FtsX-like permease family 260 371 2.7E-11 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS03660 8d929a5ee30e5a9d68990cd67b95efbb 836 Pfam PF02687 FtsX-like permease family 715 829 2.3E-17 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS03660 8d929a5ee30e5a9d68990cd67b95efbb 836 PANTHER PTHR30287 2 836 5.4E-135 T 25-04-2016 SMD_RS13680 2222ad4e92292da3e9131f5b0f848289 290 Pfam PF12787 EcsC protein family 44 263 6.7E-37 T 25-04-2016 IPR024787 EcsC protein SMD_RS19735 8f02c96049475839a1149deba502c6c5 259 Pfam PF01936 NYN domain 7 142 1.8E-32 T 25-04-2016 IPR021139 NYN domain, limkain-b1-type SMD_RS19735 8f02c96049475839a1149deba502c6c5 259 Pfam PF12872 OST-HTH/LOTUS domain 184 250 1.6E-14 T 25-04-2016 IPR025605 OST-HTH/LOTUS domain SMD_RS19735 8f02c96049475839a1149deba502c6c5 259 PANTHER PTHR35811 3 259 1.6E-73 T 25-04-2016 SMD_RS19735 8f02c96049475839a1149deba502c6c5 259 Gene3D G3DSA:3.40.50.1010 2 144 8.4E-29 T 25-04-2016 IPR029060 PIN domain-like SMD_RS19735 8f02c96049475839a1149deba502c6c5 259 PANTHER PTHR35811:SF1 3 259 1.6E-73 T 25-04-2016 SMD_RS04800 75120c8ea1068c7bcb4b7cde2aed25f3 378 Pfam PF07394 Protein of unknown function (DUF1501) 216 356 7.8E-33 T 25-04-2016 IPR010869 Protein of unknown function DUF1501 SMD_RS04800 75120c8ea1068c7bcb4b7cde2aed25f3 378 PANTHER PTHR15535 232 321 1.1E-21 T 25-04-2016 SMD_RS04800 75120c8ea1068c7bcb4b7cde2aed25f3 378 PANTHER PTHR15535:SF21 232 321 1.1E-21 T 25-04-2016 SMD_RS13560 90d7da3d4f087aa95fafbf9cbe93cf5e 318 Gene3D G3DSA:3.90.1680.10 125 299 5.3E-21 T 25-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS13560 90d7da3d4f087aa95fafbf9cbe93cf5e 318 Pfam PF02586 SOS response associated peptidase (SRAP) 129 304 1.7E-15 T 25-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS13560 90d7da3d4f087aa95fafbf9cbe93cf5e 318 SUPERFAMILY SSF143081 113 309 1.57E-30 T 25-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS01870 1ff8917d513d5a7b0b870c3161aa609a 569 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 566 27.781 T 25-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SMD_RS01870 1ff8917d513d5a7b0b870c3161aa609a 569 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 5 566 3.2E-159 T 25-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SMD_RS01870 1ff8917d513d5a7b0b870c3161aa609a 569 PIRSF PIRSF001294 1 568 4.0E-215 T 25-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SMD_RS01870 1ff8917d513d5a7b0b870c3161aa609a 569 PANTHER PTHR30607 1 569 2.2E-268 T 25-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SMD_RS01870 1ff8917d513d5a7b0b870c3161aa609a 569 Pfam PF03814 Potassium-transporting ATPase A subunit 6 564 1.1E-208 T 25-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SMD_RS14070 8f86968934eb93ca0d8b7bab1a674d3c 478 Gene3D G3DSA:1.25.40.10 427 473 1.4E-5 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS14070 8f86968934eb93ca0d8b7bab1a674d3c 478 PANTHER PTHR22935 31 322 1.3E-59 T 25-04-2016 SMD_RS14070 8f86968934eb93ca0d8b7bab1a674d3c 478 Pfam PF00144 Beta-lactamase 36 348 1.1E-47 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS14070 8f86968934eb93ca0d8b7bab1a674d3c 478 Gene3D G3DSA:3.40.710.10 28 362 2.2E-68 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS14070 8f86968934eb93ca0d8b7bab1a674d3c 478 SUPERFAMILY SSF56601 30 330 6.42E-68 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS14070 8f86968934eb93ca0d8b7bab1a674d3c 478 SUPERFAMILY SSF48452 426 474 1.54E-5 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS03195 bbbb29f075ef7a805f8e1804d7c8a6b7 262 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 169 5.0E-28 T 25-04-2016 SMD_RS04745 3416c59a99b48f3a9274d8b6279d1b5d 289 Pfam PF10134 Replication initiator protein A 36 265 3.8E-91 T 25-04-2016 IPR018777 Replication initiator protein A SMD_RS06990 f6757991ebfdff2e98442ee580bd1b87 278 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 234 260 - T 25-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SMD_RS06990 f6757991ebfdff2e98442ee580bd1b87 278 PANTHER PTHR13773 3 269 9.2E-57 T 25-04-2016 SMD_RS06990 f6757991ebfdff2e98442ee580bd1b87 278 Pfam PF01148 Cytidylyltransferase family 3 275 1.3E-66 T 25-04-2016 SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 Pfam PF00557 Metallopeptidase family M24 167 427 1.2E-41 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 3 440 53.165 T 25-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 PANTHER PTHR10804:SF101 1 438 4.9E-207 T 25-04-2016 SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 25-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 Gene3D G3DSA:3.90.230.10 160 437 1.1E-51 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 SUPERFAMILY SSF55920 161 435 3.01E-53 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMD_RS17965 64f0e08aa44cd798ced71fe4d4c37bc7 443 PANTHER PTHR10804 1 438 4.9E-207 T 25-04-2016 SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 Pfam PF00106 short chain dehydrogenase 4 188 6.4E-50 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.6E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.6E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.6E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.6E-24 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 SUPERFAMILY SSF51735 3 225 3.75E-58 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0014 T 25-04-2016 SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PANTHER PTHR24322 7 133 5.4E-64 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PANTHER PTHR24322 149 181 5.4E-64 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PANTHER PTHR24322:SF392 7 133 5.4E-64 T 25-04-2016 SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PANTHER PTHR24322:SF392 149 181 5.4E-64 T 25-04-2016 SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 Gene3D G3DSA:3.40.50.720 3 232 2.1E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.0E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.0E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS01805 25b2931684216e4bd3e5d1dce07e7778 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.0E-9 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS11295 06472409451f42f11ac62a3a4aecff5c 261 PANTHER PTHR32251 4 258 9.3E-54 T 25-04-2016 SMD_RS11295 06472409451f42f11ac62a3a4aecff5c 261 Pfam PF06966 Protein of unknown function (DUF1295) 19 245 4.4E-67 T 25-04-2016 IPR010721 Protein of unknown function DUF1295 SMD_RS06150 596c72adc801771c1c0a60307e33d154 269 PANTHER PTHR34385 136 266 2.7E-44 T 25-04-2016 SMD_RS06150 596c72adc801771c1c0a60307e33d154 269 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 142 266 2.6E-34 T 25-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 SMD_RS06150 596c72adc801771c1c0a60307e33d154 269 PANTHER PTHR34385:SF1 136 266 2.7E-44 T 25-04-2016 SMD_RS06150 596c72adc801771c1c0a60307e33d154 269 SUPERFAMILY SSF55166 138 266 1.67E-23 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMD_RS11200 3501156b0e1a47703bbe39e0f51c0d3f 133 Pfam PF11604 Copper binding periplasmic protein CusF 66 130 1.6E-24 T 25-04-2016 IPR021647 Copper binding periplasmic protein CusF SMD_RS13655 7786add071e3b452f7718adf205a3ea7 169 PANTHER PTHR38774 2 155 3.0E-53 T 25-04-2016 SMD_RS13655 7786add071e3b452f7718adf205a3ea7 169 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 6.2E-26 T 25-04-2016 IPR009659 Protein of unknown function DUF1249 SMD_RS13655 7786add071e3b452f7718adf205a3ea7 169 PANTHER PTHR38774:SF1 2 155 3.0E-53 T 25-04-2016 SMD_RS13065 b72ca97b08617ff2bb9a374d63ae647e 107 PANTHER PTHR30561 2 103 2.0E-19 T 25-04-2016 SMD_RS13065 b72ca97b08617ff2bb9a374d63ae647e 107 Pfam PF00893 Small Multidrug Resistance protein 6 96 3.3E-19 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMD_RS13065 b72ca97b08617ff2bb9a374d63ae647e 107 SUPERFAMILY SSF103481 8 105 7.06E-17 T 25-04-2016 SMD_RS14210 7f67c0c27b0045e942a823f81aa81eaf 161 SUPERFAMILY SSF55729 8 142 2.06E-25 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14210 7f67c0c27b0045e942a823f81aa81eaf 161 PANTHER PTHR23091 1 146 3.1E-12 T 25-04-2016 SMD_RS14210 7f67c0c27b0045e942a823f81aa81eaf 161 Gene3D G3DSA:3.40.630.30 8 139 1.6E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS14210 7f67c0c27b0045e942a823f81aa81eaf 161 Pfam PF00583 Acetyltransferase (GNAT) family 61 140 1.3E-11 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS15670 724081047de9339514b3c0421fee2493 153 Pfam PF08875 Domain of unknown function (DUF1833) 18 131 1.0E-15 T 25-04-2016 IPR014974 Domain of unknown function DUF1833 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 3.5E-27 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 PANTHER PTHR33398 2 89 4.0E-34 T 25-04-2016 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 8.0E-22 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 Gene3D G3DSA:1.20.58.110 3 87 9.5E-29 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 Pfam PF01649 Ribosomal protein S20 2 84 2.8E-26 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 SUPERFAMILY SSF46992 3 86 2.62E-29 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS06250 18556471863198279d0dba1384d61d3a 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.074 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS00570 b4bac2a7f5f54529156a07262ab0150e 544 PANTHER PTHR30624:SF10 33 246 3.8E-214 T 25-04-2016 SMD_RS00570 b4bac2a7f5f54529156a07262ab0150e 544 PANTHER PTHR30624:SF10 265 541 3.8E-214 T 25-04-2016 SMD_RS00570 b4bac2a7f5f54529156a07262ab0150e 544 PANTHER PTHR30624 33 246 3.8E-214 T 25-04-2016 SMD_RS00570 b4bac2a7f5f54529156a07262ab0150e 544 PANTHER PTHR30624 265 541 3.8E-214 T 25-04-2016 SMD_RS00570 b4bac2a7f5f54529156a07262ab0150e 544 SUPERFAMILY SSF111283 42 537 3.66E-94 T 25-04-2016 SMD_RS00570 b4bac2a7f5f54529156a07262ab0150e 544 Pfam PF01523 Putative modulator of DNA gyrase 59 385 1.2E-53 T 25-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMD_RS06470 33b5a96219ca97f06f282c4cf6335339 200 ProSitePatterns PS00018 EF-hand calcium-binding domain. 176 188 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS06470 33b5a96219ca97f06f282c4cf6335339 200 Pfam PF06078 Bacterial protein of unknown function (DUF937) 5 138 6.0E-35 T 25-04-2016 IPR009282 Protein of unknown function DUF937 SMD_RS05505 15cfd07ce962401416b22a48957b52e4 220 Pfam PF09997 Predicted membrane protein (DUF2238) 53 203 1.1E-45 T 25-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 SMD_RS06010 8df97f23ce60083ef4cfcecfa9036d0d 455 Pfam PF03600 Citrate transporter 278 451 7.6E-11 T 25-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SMD_RS06010 8df97f23ce60083ef4cfcecfa9036d0d 455 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 149 7.1E-66 T 25-04-2016 IPR009827 Dicarboxylate carrier MatC N-terminal SMD_RS16300 163123fb01893866675db58b841271f5 129 Gene3D G3DSA:3.10.180.10 5 125 1.9E-20 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS16300 163123fb01893866675db58b841271f5 129 SUPERFAMILY SSF54593 7 122 1.14E-18 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS10645 f824adf073f6ba6116e89bf4fa6b78e9 132 Pfam PF01850 PIN domain 3 119 4.8E-9 T 25-04-2016 IPR002716 PIN domain SMD_RS10645 f824adf073f6ba6116e89bf4fa6b78e9 132 SUPERFAMILY SSF88723 1 129 6.54E-12 T 25-04-2016 IPR029060 PIN domain-like SMD_RS05495 032b840656a0f184a4e38e686fe8e664 253 Pfam PF11306 Protein of unknown function (DUF3108) 20 250 2.8E-28 T 25-04-2016 IPR021457 Protein of unknown function DUF3108 SMD_RS05020 83758cf53f7a031189364bd0ffaa5d0a 296 PANTHER PTHR35007:SF2 62 283 4.8E-44 T 25-04-2016 SMD_RS05020 83758cf53f7a031189364bd0ffaa5d0a 296 Pfam PF00482 Type II secretion system (T2SS), protein F 156 282 1.1E-20 T 25-04-2016 IPR018076 Type II secretion system F domain SMD_RS05020 83758cf53f7a031189364bd0ffaa5d0a 296 PANTHER PTHR35007 62 283 4.8E-44 T 25-04-2016 SMD_RS13660 f8d7188f8a118ff2ce0125bf57f0c84d 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 71.147 T 25-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein SMD_RS13660 f8d7188f8a118ff2ce0125bf57f0c84d 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 5.9E-71 T 25-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 SMD_RS13660 f8d7188f8a118ff2ce0125bf57f0c84d 273 PANTHER PTHR31756 1 273 2.0E-103 T 25-04-2016 SMD_RS13660 f8d7188f8a118ff2ce0125bf57f0c84d 273 PANTHER PTHR31756:SF3 1 273 2.0E-103 T 25-04-2016 SMD_RS05110 2ce6b167904daa8f75a254ac3ef1647f 175 PANTHER PTHR37530 1 175 3.9E-47 T 25-04-2016 SMD_RS05110 2ce6b167904daa8f75a254ac3ef1647f 175 Pfam PF03843 Outer membrane lipoprotein Slp family 15 166 2.8E-43 T 25-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SMD_RS05110 2ce6b167904daa8f75a254ac3ef1647f 175 PIRSF PIRSF004982 1 175 2.2E-48 T 25-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SMD_RS08785 c75ecdda5f023435d140bd6d8e2de9ba 343 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 74 87 - T 25-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS08785 c75ecdda5f023435d140bd6d8e2de9ba 343 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 339 28.905 T 25-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS08785 c75ecdda5f023435d140bd6d8e2de9ba 343 SUPERFAMILY SSF55120 5 334 3.6E-91 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS08785 c75ecdda5f023435d140bd6d8e2de9ba 343 PANTHER PTHR13326 9 334 1.1E-65 T 25-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS08785 c75ecdda5f023435d140bd6d8e2de9ba 343 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 14 165 3.1E-41 T 25-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS08785 c75ecdda5f023435d140bd6d8e2de9ba 343 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 182 334 2.7E-19 T 25-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMD_RS08225 a12e0943b8d5b0c3648dc52c6a6dd446 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 4.5E-63 T 25-04-2016 IPR021364 Protein of unknown function DUF2857 SMD_RS10820 11a00c962b8f1bd671e31707c25baf20 389 PRINTS PR01007 Flagellar hook-length control protein signature 23 40 5.5E-12 T 25-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SMD_RS10820 11a00c962b8f1bd671e31707c25baf20 389 PRINTS PR01007 Flagellar hook-length control protein signature 314 337 5.5E-12 T 25-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SMD_RS10820 11a00c962b8f1bd671e31707c25baf20 389 PRINTS PR01007 Flagellar hook-length control protein signature 299 314 5.5E-12 T 25-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SMD_RS10820 11a00c962b8f1bd671e31707c25baf20 389 PRINTS PR01007 Flagellar hook-length control protein signature 281 299 5.5E-12 T 25-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SMD_RS10820 11a00c962b8f1bd671e31707c25baf20 389 Pfam PF02120 Flagellar hook-length control protein FliK 268 345 1.2E-20 T 25-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SMD_RS10820 11a00c962b8f1bd671e31707c25baf20 389 PANTHER PTHR37533 132 389 2.0E-38 T 25-04-2016 SMD_RS02460 ef07ff6f7561ee6fa785656e9639ca4c 394 Pfam PF07690 Major Facilitator Superfamily 28 240 1.7E-25 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS02460 ef07ff6f7561ee6fa785656e9639ca4c 394 PANTHER PTHR23501:SF16 23 389 1.1E-57 T 25-04-2016 SMD_RS02460 ef07ff6f7561ee6fa785656e9639ca4c 394 Gene3D G3DSA:1.20.1250.20 17 201 1.6E-24 T 25-04-2016 SMD_RS02460 ef07ff6f7561ee6fa785656e9639ca4c 394 Gene3D G3DSA:1.20.1250.20 210 387 1.5E-7 T 25-04-2016 SMD_RS02460 ef07ff6f7561ee6fa785656e9639ca4c 394 SUPERFAMILY SSF103473 8 389 5.75E-48 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS02460 ef07ff6f7561ee6fa785656e9639ca4c 394 PANTHER PTHR23501 23 389 1.1E-57 T 25-04-2016 SMD_RS16615 bdca08a6093d99c2703925268d10869d 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 210 1.3E-64 T 25-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SMD_RS16615 bdca08a6093d99c2703925268d10869d 212 PANTHER PTHR20855 11 212 1.2E-65 T 25-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SMD_RS16615 bdca08a6093d99c2703925268d10869d 212 PANTHER PTHR20855:SF3 11 212 1.2E-65 T 25-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SMD_RS16615 bdca08a6093d99c2703925268d10869d 212 Pfam PF03006 Haemolysin-III related 9 204 2.0E-38 T 25-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SMD_RS07910 f11945f74dbfc6de4cdb32f1a83a41c9 148 Pfam PF07511 Protein of unknown function (DUF1525) 35 145 2.3E-40 T 25-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 SMD_RS07910 f11945f74dbfc6de4cdb32f1a83a41c9 148 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 35 144 9.7E-42 T 25-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 SMD_RS10605 fc2acfc9b8ffdb3d2a28ac3e2a45c8c6 290 SUPERFAMILY SSF52096 47 267 3.98E-35 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS10605 fc2acfc9b8ffdb3d2a28ac3e2a45c8c6 290 Pfam PF00378 Enoyl-CoA hydratase/isomerase 124 229 2.9E-20 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMD_RS10605 fc2acfc9b8ffdb3d2a28ac3e2a45c8c6 290 Gene3D G3DSA:3.90.226.10 16 226 1.7E-36 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS10605 fc2acfc9b8ffdb3d2a28ac3e2a45c8c6 290 PANTHER PTHR11941 86 226 1.2E-24 T 25-04-2016 SMD_RS08705 4ca8a66e8d42b4727a9c0b2a86926549 219 Pfam PF06055 Exopolysaccharide synthesis, ExoD 25 201 1.5E-47 T 25-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD SMD_RS08705 4ca8a66e8d42b4727a9c0b2a86926549 219 PANTHER PTHR41795 12 202 1.9E-44 T 25-04-2016 SMD_RS08705 4ca8a66e8d42b4727a9c0b2a86926549 219 PIRSF PIRSF033239 13 216 5.6E-43 T 25-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD SMD_RS09180 2911950608866de407ca54242c2ef00f 413 Pfam PF02687 FtsX-like permease family 274 406 8.0E-17 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS09180 2911950608866de407ca54242c2ef00f 413 Pfam PF12704 MacB-like periplasmic core domain 27 204 2.5E-15 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMD_RS09180 2911950608866de407ca54242c2ef00f 413 PANTHER PTHR30489 1 413 2.9E-101 T 25-04-2016 SMD_RS09180 2911950608866de407ca54242c2ef00f 413 PANTHER PTHR30489:SF8 1 413 2.9E-101 T 25-04-2016 SMD_RS09180 2911950608866de407ca54242c2ef00f 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.3E-135 T 25-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SMD_RS14380 a262fafb7f18bbf694892d29c003c827 690 Pfam PF01757 Acyltransferase family 13 350 4.5E-31 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SMD_RS14380 a262fafb7f18bbf694892d29c003c827 690 PANTHER PTHR23028 6 492 2.5E-82 T 25-04-2016 SMD_RS14380 a262fafb7f18bbf694892d29c003c827 690 PANTHER PTHR23028:SF53 6 492 2.5E-82 T 25-04-2016 SMD_RS03940 4d6388360d2e6a991dc91b40de1e3f1f 183 PANTHER PTHR13696:SF62 18 179 6.9E-51 T 25-04-2016 SMD_RS03940 4d6388360d2e6a991dc91b40de1e3f1f 183 PANTHER PTHR13696 18 179 6.9E-51 T 25-04-2016 SMD_RS03940 4d6388360d2e6a991dc91b40de1e3f1f 183 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 10 182 1.8E-82 T 25-04-2016 IPR017776 FeS assembly SUF system protein SufT, putative SMD_RS03940 4d6388360d2e6a991dc91b40de1e3f1f 183 SUPERFAMILY SSF117916 80 181 7.52E-27 T 25-04-2016 SMD_RS03940 4d6388360d2e6a991dc91b40de1e3f1f 183 Pfam PF01883 Domain of unknown function DUF59 84 159 9.6E-14 T 25-04-2016 IPR002744 Domain of unknown function DUF59 SMD_RS15270 00083c1016494b5496c508257b440ffb 213 PANTHER PTHR30086 1 209 8.7E-50 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS15270 00083c1016494b5496c508257b440ffb 213 PIRSF PIRSF006324 1 211 4.4E-57 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS15270 00083c1016494b5496c508257b440ffb 213 Pfam PF01810 LysE type translocator 19 208 9.8E-38 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 Gene3D G3DSA:2.40.170.20 282 343 1.4E-45 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 Gene3D G3DSA:2.40.170.20 381 931 1.4E-45 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 Pfam PF00593 TonB dependent receptor 628 932 6.0E-14 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 SUPERFAMILY SSF56935 695 931 5.13E-74 T 25-04-2016 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 SUPERFAMILY SSF56935 392 657 5.13E-74 T 25-04-2016 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 SUPERFAMILY SSF56935 135 344 5.13E-74 T 25-04-2016 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 Pfam PF07715 TonB-dependent Receptor Plug Domain 160 281 2.5E-19 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 Gene3D G3DSA:2.170.130.10 147 281 5.4E-34 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 PANTHER PTHR30069:SF7 147 656 2.6E-38 T 25-04-2016 SMD_RS06300 c0ccfbb1451dcf3f0a680c8f1c7cf4ac 932 PANTHER PTHR30069 147 656 2.6E-38 T 25-04-2016 SMD_RS08715 75a7582baff3d35f7e20655e26131df8 208 PANTHER PTHR37298 2 208 1.7E-70 T 25-04-2016 SMD_RS08715 75a7582baff3d35f7e20655e26131df8 208 Pfam PF01865 Protein of unknown function DUF47 61 197 3.7E-6 T 25-04-2016 IPR018445 Putative phosphate transport regulator SMD_RS02600 24698d84d3356adf9f93bd82f8a2013a 136 Pfam PF07681 DoxX 16 97 4.4E-13 T 25-04-2016 IPR032808 DoxX family SMD_RS02600 24698d84d3356adf9f93bd82f8a2013a 136 PANTHER PTHR33452:SF1 5 134 2.3E-19 T 25-04-2016 SMD_RS02600 24698d84d3356adf9f93bd82f8a2013a 136 PANTHER PTHR33452 5 134 2.3E-19 T 25-04-2016 SMD_RS14150 9088462e60bcd5d448c6973168720738 130 Pfam PF11236 Protein of unknown function (DUF3037) 9 126 2.0E-39 T 25-04-2016 IPR021398 Protein of unknown function DUF3037 SMD_RS04930 09b6bae1fc60b66ff743337aa46212f8 81 Pfam PF10038 Protein of unknown function (DUF2274) 5 69 2.7E-25 T 25-04-2016 IPR018733 Protein of unknown function DUF2274 SMD_RS11920 fb222479f539a2b4ce591e356d9df8e7 337 Pfam PF13226 Domain of unknown function (DUF4034) 35 153 6.5E-7 T 25-04-2016 IPR025115 Domain of unknown function DUF4034 SMD_RS20935 1db660fcab1265ed38f84faced086de2 330 PANTHER PTHR35337 1 329 7.3E-40 T 25-04-2016 SMD_RS20935 1db660fcab1265ed38f84faced086de2 330 Pfam PF01944 Stage II sporulation protein M 118 294 7.7E-35 T 25-04-2016 IPR002798 Stage II sporulation protein M-like SMD_RS11555 5ff71cbb155efb7c3854c0e4b3483935 140 Pfam PF04120 Low affinity iron permease 6 126 2.7E-48 T 25-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 SUPERFAMILY SSF48208 452 942 1.09E-15 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 Gene3D G3DSA:1.20.1610.10 645 817 9.5E-53 T 25-04-2016 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 228 960 3.5E-135 T 25-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 Gene3D G3DSA:1.20.1050.60 552 642 2.3E-29 T 25-04-2016 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 Gene3D G3DSA:3.30.2080.10 818 966 1.1E-60 T 25-04-2016 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 PANTHER PTHR12143 193 962 3.3E-232 T 25-04-2016 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 PANTHER PTHR12143:SF19 193 962 3.3E-232 T 25-04-2016 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 Pfam PF07971 Glycosyl hydrolase family 92 423 957 7.8E-144 T 25-04-2016 IPR012939 Glycosyl hydrolase family 92 SMD_RS18350 f7d2589f37153e6ef7061a67df7bee7f 1114 Gene3D G3DSA:2.70.98.10 214 507 4.1E-72 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMD_RS13180 e46ede4875ae6c4053b0abb8c1b0dff2 153 Pfam PF12266 Protein of unknown function (DUF3613) 89 140 2.7E-12 T 25-04-2016 IPR022053 Protein of unknown function DUF3613 SMD_RS11590 d980a3ea60d10789bb9e977d5961cb9f 255 PANTHER PTHR30348 11 251 7.1E-72 T 25-04-2016 SMD_RS11590 d980a3ea60d10789bb9e977d5961cb9f 255 SUPERFAMILY SSF117396 11 250 4.58E-72 T 25-04-2016 IPR002763 Protein of unknown function DUF72 SMD_RS11590 d980a3ea60d10789bb9e977d5961cb9f 255 Gene3D G3DSA:3.20.20.410 7 251 1.1E-70 T 25-04-2016 IPR002763 Protein of unknown function DUF72 SMD_RS11590 d980a3ea60d10789bb9e977d5961cb9f 255 Pfam PF01904 Protein of unknown function DUF72 36 247 9.5E-54 T 25-04-2016 IPR002763 Protein of unknown function DUF72 SMD_RS19980 59324c98128e1f7ace21f38a785132c2 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 96 5.0E-11 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMD_RS00795 1dc54be9a9ae13aa13c9abc6ae2403ba 221 SUPERFAMILY SSF89872 125 199 6.15E-10 T 25-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SMD_RS00795 1dc54be9a9ae13aa13c9abc6ae2403ba 221 Gene3D G3DSA:3.40.1420.10 94 216 2.6E-27 T 25-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SMD_RS00795 1dc54be9a9ae13aa13c9abc6ae2403ba 221 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 134 183 2.4E-5 T 25-04-2016 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 Pfam PF00593 TonB dependent receptor 440 717 4.5E-23 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 PANTHER PTHR32552 6 589 8.9E-38 T 25-04-2016 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 PANTHER PTHR32552 606 719 8.9E-38 T 25-04-2016 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 SUPERFAMILY SSF56935 26 719 9.52E-91 T 25-04-2016 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 158 3.9E-17 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 Gene3D G3DSA:2.40.170.20 159 315 8.5E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 Gene3D G3DSA:2.40.170.20 350 719 8.5E-68 T 25-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMD_RS13005 8f249bf0bf1a791e21ddfb9d0b6d35e0 719 Gene3D G3DSA:2.170.130.10 27 158 3.2E-27 T 25-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMD_RS11170 35116aa42675fda1c999e4faa2a2c4a6 352 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 3.7E-24 T 25-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain SMD_RS05155 45be0181bfcbb4abc22612ab1b088768 260 SUPERFAMILY SSF56112 12 144 1.26E-5 T 25-04-2016 IPR011009 Protein kinase-like domain SMD_RS05265 9190c6be5e22d0bd25ca14ad92525e0e 224 PANTHER PTHR10108 4 222 5.5E-58 T 25-04-2016 SMD_RS05265 9190c6be5e22d0bd25ca14ad92525e0e 224 PANTHER PTHR10108:SF850 4 222 5.5E-58 T 25-04-2016 SMD_RS05265 9190c6be5e22d0bd25ca14ad92525e0e 224 Pfam PF13649 Methyltransferase domain 45 138 6.7E-11 T 25-04-2016 SMD_RS05265 9190c6be5e22d0bd25ca14ad92525e0e 224 Gene3D G3DSA:3.40.50.150 8 222 2.9E-31 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS05265 9190c6be5e22d0bd25ca14ad92525e0e 224 SUPERFAMILY SSF53335 10 222 4.71E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 PANTHER PTHR34383:SF1 5 249 2.7E-139 T 25-04-2016 SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 5 228 1.6E-92 T 25-04-2016 IPR022488 Polyphosphate kinase-2-related SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 PANTHER PTHR34383 5 249 2.7E-139 T 25-04-2016 SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 PIRSF PIRSF028756 1 253 8.3E-109 T 25-04-2016 IPR016898 Polyphosphate kinase 2 SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 229 1.5E-102 T 25-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 SUPERFAMILY SSF52540 35 220 5.63E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS03980 7eecc8f62a09fb15eed576bacfc9182c 260 Gene3D G3DSA:3.40.50.300 3 237 6.8E-93 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS20095 ec88022de70d8c5d70d6a86353a411f9 97 SUPERFAMILY SSF54106 45 95 1.7E-8 T 25-04-2016 IPR018392 LysM domain SMD_RS20095 ec88022de70d8c5d70d6a86353a411f9 97 PANTHER PTHR34700 4 97 6.1E-21 T 25-04-2016 SMD_RS20095 ec88022de70d8c5d70d6a86353a411f9 97 Gene3D G3DSA:3.10.350.10 45 96 2.6E-14 T 25-04-2016 IPR018392 LysM domain SMD_RS20095 ec88022de70d8c5d70d6a86353a411f9 97 Pfam PF01476 LysM domain 47 95 2.0E-12 T 25-04-2016 IPR018392 LysM domain SMD_RS20095 ec88022de70d8c5d70d6a86353a411f9 97 SMART SM00257 46 95 1.7E-11 T 25-04-2016 IPR018392 LysM domain SMD_RS18690 d411879c6785b37d1395fe7c34aad012 347 SUPERFAMILY SSF52096 155 327 1.09E-16 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS18690 d411879c6785b37d1395fe7c34aad012 347 Gene3D G3DSA:3.90.226.10 123 331 2.3E-12 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMD_RS18690 d411879c6785b37d1395fe7c34aad012 347 Pfam PF03572 Peptidase family S41 151 320 2.0E-13 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMD_RS04735 aa7ba2140cdaa9fac0f0c84520e935ba 265 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 151 249 3.3E-31 T 25-04-2016 IPR018754 Protein of unknown function DUF2285 SMD_RS19520 48d7ec888dbc110ae9fad07378473372 558 SUPERFAMILY SSF55166 235 314 9.81E-10 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMD_RS19520 48d7ec888dbc110ae9fad07378473372 558 Pfam PF08291 Peptidase M15 241 304 7.5E-10 T 25-04-2016 IPR013230 Peptidase M15A, C-terminal MetaCyc: PWY-6470 SMD_RS19520 48d7ec888dbc110ae9fad07378473372 558 Gene3D G3DSA:3.30.1380.10 240 316 2.3E-13 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMD_RS17045 76da4cb1c1ee0bc07a145c25520df19b 188 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 186 4.4E-51 T 25-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 SMD_RS17045 76da4cb1c1ee0bc07a145c25520df19b 188 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 114 5.4E-37 T 25-04-2016 IPR006531 Gp5 N-terminal SMD_RS21170 85db38ad3dc5e2137fc9680e274f4637 406 SUPERFAMILY SSF103365 13 406 9.68E-132 T 25-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SMD_RS21170 85db38ad3dc5e2137fc9680e274f4637 406 PANTHER PTHR11118 17 406 2.2E-189 T 25-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SMD_RS21170 85db38ad3dc5e2137fc9680e274f4637 406 Pfam PF01139 tRNA-splicing ligase RtcB 34 406 5.3E-129 T 25-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SMD_RS21170 85db38ad3dc5e2137fc9680e274f4637 406 PANTHER PTHR11118:SF3 17 406 2.2E-189 T 25-04-2016 SMD_RS00875 96c444d85a8aa81721b8014774299f9d 148 Pfam PF13801 Heavy-metal resistance 13 133 8.0E-19 T 25-04-2016 IPR025961 Heavy-metal resistance protein SMD_RS15220 aa6dda497531af906992b55668902292 120 SUPERFAMILY SSF103196 5 110 2.07E-5 T 25-04-2016 SMD_RS15220 aa6dda497531af906992b55668902292 120 Gene3D G3DSA:3.30.450.30 4 108 7.8E-4 T 25-04-2016 SMD_RS07975 e78bd1eb8718310228a70a38342d4095 191 Pfam PF13470 PIN domain 9 114 3.3E-11 T 25-04-2016 IPR002716 PIN domain SMD_RS03255 1e0bba52fb5d71d3b4666924e0ee3808 715 SUPERFAMILY SSF53448 328 395 2.62E-14 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03255 1e0bba52fb5d71d3b4666924e0ee3808 715 SUPERFAMILY SSF53448 73 300 2.62E-14 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS03255 1e0bba52fb5d71d3b4666924e0ee3808 715 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 531 632 1.9E-8 T 25-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SMD_RS03255 1e0bba52fb5d71d3b4666924e0ee3808 715 SUPERFAMILY SSF160246 646 699 4.45E-6 T 25-04-2016 SMD_RS03255 1e0bba52fb5d71d3b4666924e0ee3808 715 Pfam PF13632 Glycosyl transferase family group 2 169 388 5.5E-49 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS03255 1e0bba52fb5d71d3b4666924e0ee3808 715 SUPERFAMILY SSF160246 492 630 4.18E-16 T 25-04-2016 SMD_RS16095 7ded16222e65e8d88f8bd0ff831fbf38 166 PANTHER PTHR30399 1 161 3.4E-97 T 25-04-2016 SMD_RS16095 7ded16222e65e8d88f8bd0ff831fbf38 166 PANTHER PTHR30399:SF4 1 161 3.4E-97 T 25-04-2016 SMD_RS16095 7ded16222e65e8d88f8bd0ff831fbf38 166 Pfam PF01863 Protein of unknown function DUF45 95 149 3.0E-12 T 25-04-2016 IPR002725 Protein of unknown function DUF45 SMD_RS06905 f6744932c75883dfc29919dc1edf3b75 300 Gene3D G3DSA:2.40.100.10 52 128 2.1E-18 T 25-04-2016 IPR029000 Cyclophilin-like domain SMD_RS06905 f6744932c75883dfc29919dc1edf3b75 300 Gene3D G3DSA:2.40.100.10 166 223 2.1E-18 T 25-04-2016 IPR029000 Cyclophilin-like domain SMD_RS06905 f6744932c75883dfc29919dc1edf3b75 300 SUPERFAMILY SSF50891 52 128 2.63E-27 T 25-04-2016 IPR029000 Cyclophilin-like domain SMD_RS06905 f6744932c75883dfc29919dc1edf3b75 300 SUPERFAMILY SSF50891 165 268 2.63E-27 T 25-04-2016 IPR029000 Cyclophilin-like domain SMD_RS06905 f6744932c75883dfc29919dc1edf3b75 300 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 54 228 2.8E-24 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMD_RS10985 7e125d899725fef79205e14d46ccb258 112 SUPERFAMILY SSF140566 7 83 1.7E-5 T 25-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SMD_RS10985 7e125d899725fef79205e14d46ccb258 112 Gene3D G3DSA:1.20.58.300 7 46 4.9E-4 T 25-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SMD_RS17395 8ed6a6572e473b1ee8da843002d3f5d0 168 Pfam PF13761 Domain of unknown function (DUF4166) 9 165 9.7E-35 T 25-04-2016 IPR025311 Domain of unknown function DUF4166 SMD_RS06445 16ee0b15790bcc0ad130b8acd8e33544 144 Pfam PF08818 Domain of unknown function (DU1801) 43 136 8.2E-14 T 25-04-2016 IPR014922 Domain of unknown function DUF1801 SMD_RS06445 16ee0b15790bcc0ad130b8acd8e33544 144 SUPERFAMILY SSF159888 30 142 8.76E-28 T 25-04-2016 SMD_RS14910 2405f70ffb21f995cc377456983db552 156 Pfam PF13994 PgaD-like protein 14 147 1.1E-39 T 25-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 SMD_RS14910 2405f70ffb21f995cc377456983db552 156 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 14 151 3.3E-42 T 25-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 SMD_RS16230 72d6239398c147b51e4cf8522998ccc8 127 Pfam PF16137 Domain of unknown function (DUF4845) 31 115 9.1E-28 T 25-04-2016 IPR032314 Protein of unknown function DUF4845 SMD_RS19825 b4769d6aadf6585d8efbd0e799344d09 596 PANTHER PTHR33607:SF2 313 596 3.6E-71 T 25-04-2016 SMD_RS19825 b4769d6aadf6585d8efbd0e799344d09 596 SUPERFAMILY SSF54060 539 577 6.71E-41 T 25-04-2016 SMD_RS19825 b4769d6aadf6585d8efbd0e799344d09 596 SUPERFAMILY SSF54060 319 510 6.71E-41 T 25-04-2016 SMD_RS19825 b4769d6aadf6585d8efbd0e799344d09 596 Pfam PF13205 Bacterial Ig-like domain 197 296 5.8E-13 T 25-04-2016 IPR032812 SbsA, Ig-like domain SMD_RS19825 b4769d6aadf6585d8efbd0e799344d09 596 PANTHER PTHR33607 313 596 3.6E-71 T 25-04-2016 SMD_RS19825 b4769d6aadf6585d8efbd0e799344d09 596 Pfam PF04231 Endonuclease I 325 577 2.9E-36 T 25-04-2016 IPR007346 Endonuclease I GO:0004518 SMD_RS18665 64faf3f30604be1829b490ee03d7134a 135 PANTHER PTHR30558 8 134 5.0E-29 T 25-04-2016 SMD_RS18665 64faf3f30604be1829b490ee03d7134a 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 134 3.0E-23 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS18665 64faf3f30604be1829b490ee03d7134a 135 PANTHER PTHR30558:SF3 8 134 5.0E-29 T 25-04-2016 SMD_RS05995 55b60e1a3628f344658db582dd1ca394 315 Gene3D G3DSA:3.90.245.10 3 314 8.0E-93 T 25-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SMD_RS05995 55b60e1a3628f344658db582dd1ca394 315 SUPERFAMILY SSF53590 1 314 1.27E-85 T 25-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SMD_RS05995 55b60e1a3628f344658db582dd1ca394 315 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 305 1.4E-66 T 25-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SMD_RS05995 55b60e1a3628f344658db582dd1ca394 315 PANTHER PTHR12304 2 313 4.5E-86 T 25-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 Pfam PF00085 Thioredoxin 5 106 6.7E-33 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 PANTHER PTHR10438 3 109 3.7E-40 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 SUPERFAMILY SSF52833 2 108 6.12E-41 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 PIRSF PIRSF000077 2 108 6.1E-42 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 2.7E-37 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 Gene3D G3DSA:3.40.30.10 2 107 3.2E-39 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 PRINTS PR00421 Thioredoxin family signature 24 32 1.1E-7 T 25-04-2016 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 PRINTS PR00421 Thioredoxin family signature 32 41 1.1E-7 T 25-04-2016 SMD_RS20035 ec7dc12aadd534692d038b5d01b69d57 109 PRINTS PR00421 Thioredoxin family signature 72 83 1.1E-7 T 25-04-2016 SMD_RS13135 617b718af85613e571eb184b6971090c 181 Pfam PF01478 Type IV leader peptidase family 7 110 1.8E-16 T 25-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 4.7E-41 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 4.7E-41 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 4.7E-41 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 4.7E-41 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 Pfam PF00361 Proton-conducting membrane transporter 129 427 3.1E-79 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 PANTHER PTHR22773:SF40 1 492 1.3E-207 T 25-04-2016 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 495 1.9E-194 T 25-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 SMD_RS15420 5553c4f69ef582aaf5f256746b0e94a9 502 PANTHER PTHR22773 1 492 1.3E-207 T 25-04-2016 SMD_RS09370 d75a320f502a4865f02bee17b620219d 673 Gene3D G3DSA:3.40.50.1820 595 656 6.7E-23 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS09370 d75a320f502a4865f02bee17b620219d 673 Gene3D G3DSA:3.40.50.1820 385 538 6.7E-23 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS09370 d75a320f502a4865f02bee17b620219d 673 SUPERFAMILY SSF53474 382 648 4.23E-29 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS09370 d75a320f502a4865f02bee17b620219d 673 Pfam PF07819 PGAP1-like protein 388 501 1.6E-6 T 25-04-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 SMD_RS20665 ceed25850b8954f5b371da82c1c40b26 199 Gene3D G3DSA:3.40.30.10 8 127 1.1E-5 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS20665 ceed25850b8954f5b371da82c1c40b26 199 SUPERFAMILY SSF52833 59 196 1.02E-11 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS11160 253f77c83d4d5a90bef5fd1cdeb5a5c4 251 Pfam PF07277 SapC 26 241 4.2E-62 T 25-04-2016 IPR010836 SapC SMD_RS07920 108a81cb361070048b72c9d168c99705 255 SUPERFAMILY SSF52833 28 229 6.97E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07920 108a81cb361070048b72c9d168c99705 255 Pfam PF13462 Thioredoxin 65 209 2.8E-15 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS07920 108a81cb361070048b72c9d168c99705 255 Gene3D G3DSA:3.40.30.10 65 232 4.5E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMD_RS17745 399e6f9f66e741be0bb58842ca7cbcd2 571 PANTHER PTHR40940:SF1 6 561 8.1E-73 T 25-04-2016 SMD_RS17745 399e6f9f66e741be0bb58842ca7cbcd2 571 Pfam PF13584 Oxygen tolerance 23 457 1.6E-70 T 25-04-2016 IPR025738 Aerotolerance-related protein BatD SMD_RS17745 399e6f9f66e741be0bb58842ca7cbcd2 571 PANTHER PTHR40940 6 561 8.1E-73 T 25-04-2016 SMD_RS21315 cb9620450d9968527aa97705c0edf22e 265 SUPERFAMILY SSF69593 48 236 2.75E-23 T 25-04-2016 SMD_RS21315 cb9620450d9968527aa97705c0edf22e 265 Pfam PF01553 Acyltransferase 76 193 6.1E-13 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS21315 cb9620450d9968527aa97705c0edf22e 265 PANTHER PTHR10434 29 255 1.6E-21 T 25-04-2016 SMD_RS21315 cb9620450d9968527aa97705c0edf22e 265 Gene3D G3DSA:3.40.1130.10 150 250 4.3E-5 T 25-04-2016 SMD_RS21315 cb9620450d9968527aa97705c0edf22e 265 SMART SM00563 88 196 3.5E-19 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 Gene3D G3DSA:3.40.190.10 89 175 7.8E-22 T 25-04-2016 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 SUPERFAMILY SSF46785 1 111 1.09E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 Gene3D G3DSA:1.10.10.10 1 85 1.6E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 SUPERFAMILY SSF53850 88 295 9.5E-44 T 25-04-2016 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 Pfam PF03466 LysR substrate binding domain 87 287 4.3E-48 T 25-04-2016 IPR005119 LysR, substrate-binding SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 PANTHER PTHR30346 1 312 3.4E-123 T 25-04-2016 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 Gene3D G3DSA:3.40.190.10 176 263 1.4E-30 T 25-04-2016 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.4E-21 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMD_RS03845 05dd1e4a1fb93fb20c066f66dce24973 320 PANTHER PTHR30346:SF15 1 312 3.4E-123 T 25-04-2016 SMD_RS11675 3becf2598b40985d3855bab4f35f2189 189 Gene3D G3DSA:3.40.50.850 5 171 3.5E-32 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS11675 3becf2598b40985d3855bab4f35f2189 189 PANTHER PTHR11080:SF39 8 145 1.9E-37 T 25-04-2016 SMD_RS11675 3becf2598b40985d3855bab4f35f2189 189 SUPERFAMILY SSF52499 4 173 3.27E-33 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS11675 3becf2598b40985d3855bab4f35f2189 189 PANTHER PTHR11080 8 145 1.9E-37 T 25-04-2016 SMD_RS11675 3becf2598b40985d3855bab4f35f2189 189 Pfam PF00857 Isochorismatase family 7 170 9.0E-27 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMD_RS10545 fcce5e3908897d649ec9438a674d5d36 346 Pfam PF06674 Protein of unknown function (DUF1176) 30 342 1.0E-100 T 25-04-2016 IPR009560 Protein of unknown function DUF1176 SMD_RS02480 813536d209f1e410e8f9dfd1ec39b0f8 506 SUPERFAMILY SSF48452 87 155 9.73E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02480 813536d209f1e410e8f9dfd1ec39b0f8 506 SUPERFAMILY SSF48452 310 370 9.73E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02480 813536d209f1e410e8f9dfd1ec39b0f8 506 Gene3D G3DSA:1.25.40.10 90 168 1.9E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02480 813536d209f1e410e8f9dfd1ec39b0f8 506 Gene3D G3DSA:1.25.40.10 315 373 1.9E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS02480 813536d209f1e410e8f9dfd1ec39b0f8 506 Pfam PF13432 Tetratricopeptide repeat 321 376 3.3E-7 T 25-04-2016 SMD_RS16415 e2de4ce44473065a690ee3a230dd2273 61 PANTHER PTHR38602 1 61 3.6E-12 T 25-04-2016 SMD_RS16415 e2de4ce44473065a690ee3a230dd2273 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 2.3E-17 T 25-04-2016 IPR019201 Protein of unknown function DUF2065 SMD_RS16415 e2de4ce44473065a690ee3a230dd2273 61 PANTHER PTHR38602:SF1 1 61 3.6E-12 T 25-04-2016 SMD_RS12020 5a6e748c104672cd26cc339d059cfe11 89 Pfam PF11747 Killing trait 11 77 1.5E-30 T 25-04-2016 IPR021070 Killing trait, RebB SMD_RS18925 d5b1a557212469e186da29ff70127984 140 Pfam PF04120 Low affinity iron permease 7 125 2.5E-52 T 25-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 SMD_RS00755 797c6b76a07c804e1159214442541167 325 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 20 321 4.3E-15 T 25-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX SMD_RS02350 512b18e35ebb19c20b1b8ec887762b3e 337 PANTHER PTHR35243:SF1 71 335 7.8E-25 T 25-04-2016 SMD_RS02350 512b18e35ebb19c20b1b8ec887762b3e 337 PANTHER PTHR35243 71 335 7.8E-25 T 25-04-2016 SMD_RS19810 12cdd851698d25aa891383d562ae9ac3 203 Gene3D G3DSA:2.60.120.620 90 187 6.8E-5 T 25-04-2016 SMD_RS14020 fea621c0c59f0cc72e80ecb0b7bce222 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 90 6.8E-34 T 25-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein SMD_RS14020 fea621c0c59f0cc72e80ecb0b7bce222 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 2.0E-31 T 25-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.7E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.7E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.7E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 Pfam PF01197 Ribosomal protein L31 1 79 8.8E-30 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 9.2E-21 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 SUPERFAMILY SSF143800 1 79 1.02E-22 T 25-04-2016 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 PANTHER PTHR33280 1 80 1.9E-32 T 25-04-2016 SMD_RS17850 45ffdf3fb90b7b5c93cb1d217f200987 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.297 T 25-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMD_RS14735 ac571684dab5ffe4ebc3037f7437b5e0 534 Pfam PF10091 Putative glucoamylase 224 470 5.9E-88 T 25-04-2016 IPR019282 Domain of unknown function DUF2329 SMD_RS14735 ac571684dab5ffe4ebc3037f7437b5e0 534 PIRSF PIRSF028431 5 498 1.9E-204 T 25-04-2016 IPR016883 Uncharacterised conserved protein UCP028431 SMD_RS02870 60f91a35e3134f35c59fa18fd02881de 121 Pfam PF14346 Domain of unknown function (DUF4398) 13 111 1.1E-13 T 25-04-2016 IPR025511 Domain of unknown function DUF4398 SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 247 260 8.5E-5 T 25-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 23 39 8.5E-5 T 25-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 SUPERFAMILY SSF53335 638 699 1.05E-55 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 SUPERFAMILY SSF53335 219 357 1.05E-55 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 SUPERFAMILY SSF53335 24 156 1.05E-55 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Gene3D G3DSA:3.40.50.150 24 154 3.7E-25 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Gene3D G3DSA:3.40.50.150 229 257 3.7E-25 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Gene3D G3DSA:3.90.120.10 631 693 9.2E-18 T 25-04-2016 SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Gene3D G3DSA:3.90.120.10 258 362 9.2E-18 T 25-04-2016 SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Pfam PF00145 C-5 cytosine-specific DNA methylase 216 267 7.5E-7 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Pfam PF00145 C-5 cytosine-specific DNA methylase 642 699 7.3E-5 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08355 63cd05e8b5da5c13967197af9c4b5415 714 Pfam PF00145 C-5 cytosine-specific DNA methylase 24 152 1.4E-7 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS06370 c24fecb30c1707b096b93edcd910379a 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 112 1.0E-37 T 25-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 SMD_RS06370 c24fecb30c1707b096b93edcd910379a 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 97 5.1E-17 T 25-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SMD_RS06370 c24fecb30c1707b096b93edcd910379a 113 PANTHER PTHR36835 5 113 8.7E-38 T 25-04-2016 SMD_RS17390 9deaf7339208922939494c4c86184dad 145 Pfam PF04134 Protein of unknown function, DUF393 19 128 2.7E-31 T 25-04-2016 IPR007263 Protein of unknown function DUF393 SMD_RS17390 9deaf7339208922939494c4c86184dad 145 PANTHER PTHR33639:SF3 15 145 3.8E-63 T 25-04-2016 SMD_RS17390 9deaf7339208922939494c4c86184dad 145 PANTHER PTHR33639 15 145 3.8E-63 T 25-04-2016 SMD_RS11900 b0c158db39203a5d55d04a2d3efc6673 171 Gene3D G3DSA:3.90.79.10 17 126 3.1E-10 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS11900 b0c158db39203a5d55d04a2d3efc6673 171 ProSitePatterns PS00893 Nudix box signature. 27 48 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMD_RS11900 b0c158db39203a5d55d04a2d3efc6673 171 SUPERFAMILY SSF55811 18 72 3.38E-10 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS11900 b0c158db39203a5d55d04a2d3efc6673 171 SUPERFAMILY SSF55811 106 130 3.38E-10 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS16025 eafc79bbd73e58209c6c9682b113f898 57 Pfam PF09791 Oxidoreductase-like protein, N-terminal 10 49 6.2E-14 T 25-04-2016 IPR019180 Oxidoreductase-like, N-terminal SMD_RS06415 066cce7231f63b001ad9a706fea4aa0e 270 Pfam PF01063 Amino-transferase class IV 23 224 9.7E-27 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMD_RS06415 066cce7231f63b001ad9a706fea4aa0e 270 SUPERFAMILY SSF56752 19 238 3.53E-30 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMD_RS06415 066cce7231f63b001ad9a706fea4aa0e 270 Gene3D G3DSA:3.30.470.10 17 86 1.6E-8 T 25-04-2016 SMD_RS06415 066cce7231f63b001ad9a706fea4aa0e 270 Gene3D G3DSA:3.20.10.10 143 223 8.8E-12 T 25-04-2016 SMD_RS09605 026e9205df881960699a63c95c2f5cf1 162 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 13 159 32.741 T 25-04-2016 IPR003791 Protein of unknown function UPF0178 SMD_RS09605 026e9205df881960699a63c95c2f5cf1 162 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 29 157 1.5E-49 T 25-04-2016 IPR003791 Protein of unknown function UPF0178 SMD_RS09605 026e9205df881960699a63c95c2f5cf1 162 PANTHER PTHR35146 10 162 1.2E-55 T 25-04-2016 SMD_RS09605 026e9205df881960699a63c95c2f5cf1 162 PANTHER PTHR35146:SF1 10 162 1.2E-55 T 25-04-2016 SMD_RS20545 a444ada819b66be5d19f60299092135b 148 Pfam PF14106 Domain of unknown function (DUF4279) 14 127 1.2E-20 T 25-04-2016 IPR025459 Protein of unknown function DUF4279 SMD_RS08445 3bc5f507b93b15184a5642ef856365d4 810 SUPERFAMILY SSF52540 468 636 3.67E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08445 3bc5f507b93b15184a5642ef856365d4 810 Gene3D G3DSA:3.40.50.300 472 632 3.6E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08960 4cb312ee13a7daf31f78b8a3df14cb21 372 SUPERFAMILY SSF53474 64 348 8.98E-38 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08960 4cb312ee13a7daf31f78b8a3df14cb21 372 Gene3D G3DSA:3.40.50.1820 273 345 1.4E-38 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08960 4cb312ee13a7daf31f78b8a3df14cb21 372 Gene3D G3DSA:3.40.50.1820 109 237 1.4E-38 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08960 4cb312ee13a7daf31f78b8a3df14cb21 372 PANTHER PTHR10992 116 348 4.3E-23 T 25-04-2016 SMD_RS08960 4cb312ee13a7daf31f78b8a3df14cb21 372 Pfam PF12697 Alpha/beta hydrolase family 119 331 1.3E-15 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS04910 0b60eef884a1939ba57dd25d9ac23b65 457 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 305 3.0E-52 T 25-04-2016 IPR014150 Conjugal transfer, TrbL SMD_RS04910 0b60eef884a1939ba57dd25d9ac23b65 457 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 4.7E-52 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 SMD_RS18310 aec6921f07f05df05d6004a2ae35edbf 215 SUPERFAMILY SSF53335 3 185 8.14E-43 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18310 aec6921f07f05df05d6004a2ae35edbf 215 Gene3D G3DSA:3.40.50.150 4 205 3.2E-48 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS18310 aec6921f07f05df05d6004a2ae35edbf 215 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 177 3.5E-30 T 25-04-2016 SMD_RS18310 aec6921f07f05df05d6004a2ae35edbf 215 PANTHER PTHR11579 26 174 2.8E-30 T 25-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMD_RS18310 aec6921f07f05df05d6004a2ae35edbf 215 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 83 110 - T 25-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SMD_RS04550 062ea2d617fe87ca87cdc7d3041ca533 252 PANTHER PTHR41282:SF1 1 252 2.0E-85 T 25-04-2016 SMD_RS04550 062ea2d617fe87ca87cdc7d3041ca533 252 PIRSF PIRSF009160 1 252 7.0E-96 T 25-04-2016 IPR010539 Protein of unknown function UCP009160 SMD_RS04550 062ea2d617fe87ca87cdc7d3041ca533 252 Pfam PF12811 Bax inhibitor 1 like 23 251 1.2E-80 T 25-04-2016 IPR010539 Protein of unknown function UCP009160 SMD_RS04550 062ea2d617fe87ca87cdc7d3041ca533 252 PANTHER PTHR41282 1 252 2.0E-85 T 25-04-2016 SMD_RS20250 01da822f82899011683e99468a3aa458 253 Pfam PF01925 Sulfite exporter TauE/SafE 11 240 2.8E-33 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMD_RS20250 01da822f82899011683e99468a3aa458 253 PANTHER PTHR30269 2 243 3.7E-76 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMD_RS20250 01da822f82899011683e99468a3aa458 253 PANTHER PTHR30269:SF5 2 243 3.7E-76 T 25-04-2016 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 SUPERFAMILY SSF46689 226 276 1.3E-10 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 PANTHER PTHR11019:SF50 40 281 8.1E-30 T 25-04-2016 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 Gene3D G3DSA:1.10.10.60 175 227 2.8E-7 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 Gene3D G3DSA:1.10.10.60 228 276 5.2E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 PANTHER PTHR11019 40 281 8.1E-30 T 25-04-2016 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 SMART SM00342 190 273 1.6E-17 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 269 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 175 219 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 SUPERFAMILY SSF46689 174 220 8.69E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS18205 73e30f0dbc63c7f828f91ea3f309b8e4 299 Pfam PF12833 Helix-turn-helix domain 196 274 1.9E-18 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMD_RS12535 aacf6535c1fb1e4be1e29b418324eca7 132 PANTHER PTHR39624 17 127 4.7E-15 T 25-04-2016 SMD_RS12535 aacf6535c1fb1e4be1e29b418324eca7 132 Pfam PF02566 OsmC-like protein 34 126 5.3E-16 T 25-04-2016 IPR003718 OsmC/Ohr family SMD_RS12535 aacf6535c1fb1e4be1e29b418324eca7 132 PANTHER PTHR39624:SF2 17 127 4.7E-15 T 25-04-2016 SMD_RS12535 aacf6535c1fb1e4be1e29b418324eca7 132 SUPERFAMILY SSF82784 4 126 2.62E-30 T 25-04-2016 IPR003718 OsmC/Ohr family SMD_RS12535 aacf6535c1fb1e4be1e29b418324eca7 132 Gene3D G3DSA:3.30.300.20 7 127 1.3E-32 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMD_RS05250 a9dfc63e44a06d83a7b7d002d5dc9904 377 Gene3D G3DSA:1.20.1250.20 203 369 4.0E-12 T 25-04-2016 SMD_RS05250 a9dfc63e44a06d83a7b7d002d5dc9904 377 PANTHER PTHR23514:SF13 8 376 8.1E-113 T 25-04-2016 SMD_RS05250 a9dfc63e44a06d83a7b7d002d5dc9904 377 Gene3D G3DSA:1.20.1250.20 18 183 6.6E-18 T 25-04-2016 SMD_RS05250 a9dfc63e44a06d83a7b7d002d5dc9904 377 PANTHER PTHR23514 8 376 8.1E-113 T 25-04-2016 SMD_RS05250 a9dfc63e44a06d83a7b7d002d5dc9904 377 SUPERFAMILY SSF103473 16 376 1.31E-37 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05250 a9dfc63e44a06d83a7b7d002d5dc9904 377 Pfam PF07690 Major Facilitator Superfamily 17 183 1.1E-8 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMD_RS21505 0c7e7eda91f5e890a44ff9b05542cc2b 240 SUPERFAMILY SSF53448 2 227 7.31E-41 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS21505 0c7e7eda91f5e890a44ff9b05542cc2b 240 PANTHER PTHR10859:SF49 2 237 6.3E-80 T 25-04-2016 SMD_RS21505 0c7e7eda91f5e890a44ff9b05542cc2b 240 PANTHER PTHR10859 2 237 6.3E-80 T 25-04-2016 SMD_RS21505 0c7e7eda91f5e890a44ff9b05542cc2b 240 Pfam PF00535 Glycosyl transferase family 2 7 168 1.3E-27 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMD_RS21505 0c7e7eda91f5e890a44ff9b05542cc2b 240 Gene3D G3DSA:3.90.550.10 4 201 1.4E-24 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMD_RS09675 2a7d1f43620a11592d084f5e3c884c3e 410 Pfam PF01963 TraB family 24 245 2.0E-25 T 25-04-2016 IPR002816 Pheromone shutdown, TraB SMD_RS09675 2a7d1f43620a11592d084f5e3c884c3e 410 PANTHER PTHR21530:SF0 26 321 7.9E-81 T 25-04-2016 SMD_RS09675 2a7d1f43620a11592d084f5e3c884c3e 410 PANTHER PTHR21530 26 321 7.9E-81 T 25-04-2016 SMD_RS09675 2a7d1f43620a11592d084f5e3c884c3e 410 TIGRFAM TIGR00261 traB: TraB family protein 32 401 4.7E-85 T 25-04-2016 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal SMD_RS01265 69665fd0bbc5ff7e4c5efefa14ea89ac 223 SUPERFAMILY SSF53474 16 218 3.6E-46 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01265 69665fd0bbc5ff7e4c5efefa14ea89ac 223 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 58 152 1.7E-8 T 25-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 SMD_RS01265 69665fd0bbc5ff7e4c5efefa14ea89ac 223 PANTHER PTHR12277 25 216 4.7E-51 T 25-04-2016 SMD_RS01265 69665fd0bbc5ff7e4c5efefa14ea89ac 223 PANTHER PTHR12277:SF79 25 216 4.7E-51 T 25-04-2016 SMD_RS01265 69665fd0bbc5ff7e4c5efefa14ea89ac 223 Gene3D G3DSA:3.40.50.1820 17 220 6.1E-45 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS01770 f822c7639fa46184b97f598fb003312c 190 Gene3D G3DSA:2.40.160.10 179 188 6.3E-10 T 25-04-2016 IPR023614 Porin domain SMD_RS01770 f822c7639fa46184b97f598fb003312c 190 Gene3D G3DSA:2.40.160.10 29 141 6.3E-10 T 25-04-2016 IPR023614 Porin domain SMD_RS01770 f822c7639fa46184b97f598fb003312c 190 SUPERFAMILY SSF56935 24 125 4.03E-9 T 25-04-2016 SMD_RS01770 f822c7639fa46184b97f598fb003312c 190 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 190 2.3E-88 T 25-04-2016 IPR026364 Ax21 family SMD_RS12395 11d3f474b0574f4e930fc3166b95e3dd 125 Pfam PF04234 CopC domain 27 124 1.1E-22 T 25-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 SMD_RS12395 11d3f474b0574f4e930fc3166b95e3dd 125 SUPERFAMILY SSF81296 26 125 3.99E-22 T 25-04-2016 IPR014756 Immunoglobulin E-set SMD_RS12395 11d3f474b0574f4e930fc3166b95e3dd 125 Gene3D G3DSA:2.60.40.1220 26 125 4.6E-25 T 25-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like SMD_RS06770 773fe7e0f0906538e561e54818cbd69a 181 Pfam PF13211 Protein of unknown function (DUF4019) 69 174 1.7E-27 T 25-04-2016 IPR025091 Protein of unknown function DUF4019 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 PANTHER PTHR22773:SF49 1 509 7.2E-162 T 25-04-2016 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 Pfam PF00361 Proton-conducting membrane transporter 129 423 8.6E-36 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 5.2E-8 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 5.2E-8 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 5.2E-8 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 5.2E-8 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMD_RS20325 a42129e61f4e64b687575ed2eb5728e2 511 PANTHER PTHR22773 1 509 7.2E-162 T 25-04-2016 SMD_RS19370 242bac3ddb03326ad78a2ef8d529b63f 150 Gene3D G3DSA:1.20.1260.10 3 46 5.6E-4 T 25-04-2016 IPR012347 Ferritin-related SMD_RS19370 242bac3ddb03326ad78a2ef8d529b63f 150 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 144 8.4E-47 T 25-04-2016 IPR011971 Conserved hypothetical protein CHP02284 SMD_RS19370 242bac3ddb03326ad78a2ef8d529b63f 150 Pfam PF09537 Domain of unknown function (DUF2383) 7 114 2.2E-30 T 25-04-2016 IPR019052 Domain of unknown function DUF2383 SMD_RS08210 0cc954d71a1c0476ca6edcab646294ea 175 Pfam PF11358 Protein of unknown function (DUF3158) 11 165 1.1E-73 T 25-04-2016 IPR021502 Protein of unknown function DUF3158 SMD_RS00350 9ca4f6d354cfa1108f893484a38f593f 223 Gene3D G3DSA:1.25.40.10 63 127 1.2E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00350 9ca4f6d354cfa1108f893484a38f593f 223 SUPERFAMILY SSF81901 59 116 1.14E-7 T 25-04-2016 SMD_RS12670 8b8cd11bcef4cc0e79025eaf0bc3d676 243 Pfam PF03591 AzlC protein 30 171 1.7E-37 T 25-04-2016 IPR011606 Branched-chain amino acid transport, permease SMD_RS12670 8b8cd11bcef4cc0e79025eaf0bc3d676 243 PANTHER PTHR34979 2 243 1.6E-36 T 25-04-2016 SMD_RS14385 e3f2e635e0505434d4d0e96a9cf32c73 226 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 85 226 1.1E-29 T 25-04-2016 IPR018636 Protein of unknown function DUF2058 SMD_RS00315 994bb4290e3669cf91c2f4a96eb6d70e 400 Pfam PF00487 Fatty acid desaturase 18 229 3.4E-13 T 25-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 SMD_RS00315 994bb4290e3669cf91c2f4a96eb6d70e 400 PANTHER PTHR11351 19 382 1.7E-220 T 25-04-2016 SMD_RS00315 994bb4290e3669cf91c2f4a96eb6d70e 400 PANTHER PTHR11351:SF33 19 382 1.7E-220 T 25-04-2016 SMD_RS02615 f4ce397dfb28485e7f9c94969029c41f 82 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 1.9E-38 T 25-04-2016 IPR021724 Protein of unknown function DUF3297 SMD_RS02565 6e562e728f51c0286eed3bda44edd4a2 309 PANTHER PTHR36151:SF3 9 298 2.0E-97 T 25-04-2016 SMD_RS02565 6e562e728f51c0286eed3bda44edd4a2 309 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 50 263 1.2E-49 T 25-04-2016 IPR018713 Domain of unknown function DUF2236 SMD_RS02565 6e562e728f51c0286eed3bda44edd4a2 309 PANTHER PTHR36151 9 298 2.0E-97 T 25-04-2016 SMD_RS13460 3f4dba64d9cec7fcbeee816ef95a30c6 308 Pfam PF04773 FecR protein 96 187 9.1E-19 T 25-04-2016 IPR006860 FecR protein SMD_RS13460 3f4dba64d9cec7fcbeee816ef95a30c6 308 PIRSF PIRSF018266 1 301 3.0E-55 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS13460 3f4dba64d9cec7fcbeee816ef95a30c6 308 PANTHER PTHR30273 1 301 3.3E-36 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS10315 734304b84c1112acf8896cabaf28f5af 332 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 23 1.5E-5 T 25-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMD_RS10315 734304b84c1112acf8896cabaf28f5af 332 PANTHER PTHR10188 32 327 1.5E-152 T 25-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SMD_RS10315 734304b84c1112acf8896cabaf28f5af 332 PANTHER PTHR10188:SF23 32 327 1.5E-152 T 25-04-2016 SMD_RS10315 734304b84c1112acf8896cabaf28f5af 332 Pfam PF01112 Asparaginase 44 317 1.1E-77 T 25-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SMD_RS10315 734304b84c1112acf8896cabaf28f5af 332 SUPERFAMILY SSF56235 32 316 2.53E-82 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMD_RS03885 e65c7f14739d64d93b14ec63d99a68e9 184 Gene3D G3DSA:3.90.79.10 13 178 2.8E-39 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS03885 e65c7f14739d64d93b14ec63d99a68e9 184 Pfam PF00293 NUDIX domain 38 104 3.0E-9 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS03885 e65c7f14739d64d93b14ec63d99a68e9 184 PANTHER PTHR11839 38 176 8.0E-30 T 25-04-2016 SMD_RS03885 e65c7f14739d64d93b14ec63d99a68e9 184 SUPERFAMILY SSF55811 22 178 3.05E-30 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS21415 687e5cc688b1c21bbfa41230167a2f9d 108 PIRSF PIRSF029416 2 108 2.8E-48 T 25-04-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 SMD_RS21415 687e5cc688b1c21bbfa41230167a2f9d 108 SUPERFAMILY SSF52788 1 95 7.59E-18 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMD_RS21415 687e5cc688b1c21bbfa41230167a2f9d 108 Gene3D G3DSA:3.40.50.270 2 39 7.7E-7 T 25-04-2016 SMD_RS18985 ad308364cb9fab7b55fbea41603358af 142 PANTHER PTHR35813:SF1 9 139 2.2E-41 T 25-04-2016 SMD_RS18985 ad308364cb9fab7b55fbea41603358af 142 PIRSF PIRSF016789 21 141 1.3E-32 T 25-04-2016 IPR007401 Protein of unknown function DUF454 SMD_RS18985 ad308364cb9fab7b55fbea41603358af 142 PANTHER PTHR35813 9 139 2.2E-41 T 25-04-2016 SMD_RS18985 ad308364cb9fab7b55fbea41603358af 142 Pfam PF04304 Protein of unknown function (DUF454) 22 135 5.0E-36 T 25-04-2016 IPR007401 Protein of unknown function DUF454 SMD_RS18335 311cf41dafdc429725537b74242a972a 443 Pfam PF04932 O-Antigen ligase 219 370 7.7E-20 T 25-04-2016 IPR007016 O-antigen ligase-related SMD_RS11210 5620e855ba980330b02a5d9078ddde97 415 Pfam PF01699 Sodium/calcium exchanger protein 221 364 4.3E-5 T 25-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS11210 5620e855ba980330b02a5d9078ddde97 415 Pfam PF01699 Sodium/calcium exchanger protein 42 183 3.1E-9 T 25-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS05130 9718049903013946428895309ad0ba23 611 PANTHER PTHR33908 1 610 6.7E-201 T 25-04-2016 SMD_RS05130 9718049903013946428895309ad0ba23 611 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 52 211 1.8E-15 T 25-04-2016 SMD_RS05130 9718049903013946428895309ad0ba23 611 PANTHER PTHR33908:SF1 1 610 6.7E-201 T 25-04-2016 SMD_RS17260 70f5f640c57fca1da213cd4520544cf1 244 Pfam PF11218 Protein of unknown function (DUF3011) 32 241 1.6E-70 T 25-04-2016 IPR021381 Protein of unknown function DUF3011 SMD_RS00205 9e4b35592c6a1c61d8b66e3d9cfa9092 236 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 136 224 9.5E-8 T 25-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SMD_RS10725 fff4f03aa5b82a920e71276a80a5fc27 260 Pfam PF13614 AAA domain 1 171 2.7E-37 T 25-04-2016 IPR025669 AAA domain SMD_RS10725 fff4f03aa5b82a920e71276a80a5fc27 260 PANTHER PTHR13696 1 260 5.2E-129 T 25-04-2016 SMD_RS10725 fff4f03aa5b82a920e71276a80a5fc27 260 SUPERFAMILY SSF52540 1 251 9.37E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS10725 fff4f03aa5b82a920e71276a80a5fc27 260 PANTHER PTHR13696:SF69 1 260 5.2E-129 T 25-04-2016 SMD_RS10725 fff4f03aa5b82a920e71276a80a5fc27 260 Gene3D G3DSA:3.40.50.300 1 251 1.6E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS11395 347599bc5c91d361b220ed1ad7bc467e 368 Pfam PF02486 Replication initiation factor 169 327 1.4E-25 T 25-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 SMD_RS10730 cbaabbcfba36459357118d7c746f4a60 338 SUPERFAMILY SSF103088 142 272 6.8E-32 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS10730 cbaabbcfba36459357118d7c746f4a60 338 Pfam PF00691 OmpA family 168 266 1.1E-19 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS10730 cbaabbcfba36459357118d7c746f4a60 338 PANTHER PTHR30329:SF4 1 295 1.2E-72 T 25-04-2016 SMD_RS10730 cbaabbcfba36459357118d7c746f4a60 338 Gene3D G3DSA:3.30.1330.60 149 272 2.5E-33 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS10730 cbaabbcfba36459357118d7c746f4a60 338 PANTHER PTHR30329 1 295 1.2E-72 T 25-04-2016 SMD_RS10730 cbaabbcfba36459357118d7c746f4a60 338 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 5.7E-22 T 25-04-2016 IPR025713 Motility protein B, N-terminal domain SMD_RS08105 9fe5575ebc5987636d756e4c0beb9dd5 94 Pfam PF11284 Protein of unknown function (DUF3085) 1 88 3.0E-30 T 25-04-2016 IPR021436 Protein of unknown function DUF3085 SMD_RS20670 5132f61327651e6af351949cbabe3682 504 SUPERFAMILY SSF46785 61 132 2.39E-17 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20670 5132f61327651e6af351949cbabe3682 504 Pfam PF00155 Aminotransferase class I and II 137 391 7.7E-12 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMD_RS20670 5132f61327651e6af351949cbabe3682 504 SMART SM00345 69 128 3.5E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS20670 5132f61327651e6af351949cbabe3682 504 PANTHER PTHR11751 115 495 2.4E-40 T 25-04-2016 SMD_RS20670 5132f61327651e6af351949cbabe3682 504 SUPERFAMILY SSF53383 134 494 2.28E-61 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMD_RS20670 5132f61327651e6af351949cbabe3682 504 Gene3D G3DSA:1.10.10.10 62 129 2.0E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20670 5132f61327651e6af351949cbabe3682 504 Pfam PF00392 Bacterial regulatory proteins, gntR family 66 128 3.2E-13 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMD_RS20670 5132f61327651e6af351949cbabe3682 504 Gene3D G3DSA:3.40.640.10 170 389 2.3E-48 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMD_RS20520 4e52538d41713a89ac75a94c1008b6d4 499 Pfam PF13384 Homeodomain-like domain 12 37 1.0E-5 T 25-04-2016 SMD_RS20520 4e52538d41713a89ac75a94c1008b6d4 499 PANTHER PTHR35004 1 440 2.0E-66 T 25-04-2016 SMD_RS20520 4e52538d41713a89ac75a94c1008b6d4 499 Pfam PF00665 Integrase core domain 124 249 4.4E-14 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMD_RS20520 4e52538d41713a89ac75a94c1008b6d4 499 Gene3D G3DSA:1.10.10.10 13 38 3.1E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMD_RS20520 4e52538d41713a89ac75a94c1008b6d4 499 PANTHER PTHR35004:SF2 1 440 2.0E-66 T 25-04-2016 SMD_RS02220 8abc73f06c5f6ba4c0895ccd720ee265 454 PANTHER PTHR39479 1 454 1.9E-259 T 25-04-2016 SMD_RS02220 8abc73f06c5f6ba4c0895ccd720ee265 454 PANTHER PTHR39479:SF2 1 454 1.9E-259 T 25-04-2016 SMD_RS02220 8abc73f06c5f6ba4c0895ccd720ee265 454 SMART SM01150 12 408 1.5E-232 T 25-04-2016 IPR009770 Domain of unknown function DUF1338 SMD_RS02220 8abc73f06c5f6ba4c0895ccd720ee265 454 Pfam PF07063 Domain of unknown function (DUF1338) 11 408 2.7E-121 T 25-04-2016 IPR009770 Domain of unknown function DUF1338 SMD_RS02055 3e92e5c42f1d066b3d28487f969736f8 238 Pfam PF02104 SURF1 family 16 219 4.8E-19 T 25-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 SMD_RS17240 5efd9020ad115452ba5d949ca41405ab 210 PANTHER PTHR37946:SF1 1 210 2.5E-47 T 25-04-2016 SMD_RS17240 5efd9020ad115452ba5d949ca41405ab 210 Pfam PF12697 Alpha/beta hydrolase family 5 129 4.8E-6 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMD_RS17240 5efd9020ad115452ba5d949ca41405ab 210 PANTHER PTHR37946 1 210 2.5E-47 T 25-04-2016 SMD_RS17240 5efd9020ad115452ba5d949ca41405ab 210 SUPERFAMILY SSF53474 3 170 5.5E-23 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS17240 5efd9020ad115452ba5d949ca41405ab 210 Gene3D G3DSA:3.40.50.1820 3 200 1.9E-22 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS04325 f5b7bd0b1bbd5662b888d9c1fc42c9ab 155 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 7.0E-36 T 25-04-2016 IPR021125 Protein of unknown function DUF2127 SMD_RS17095 954054cc0ac6aa3ed5c30be8d9d1722a 110 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 14 68 2.5E-20 T 25-04-2016 IPR026365 Phage-associated protein, BcepMu gp16 family SMD_RS04445 1bf94b210595e52a79af2fd454d5f361 259 PANTHER PTHR36926 1 207 1.9E-39 T 25-04-2016 SMD_RS04445 1bf94b210595e52a79af2fd454d5f361 259 PANTHER PTHR36926:SF1 1 207 1.9E-39 T 25-04-2016 SMD_RS04445 1bf94b210595e52a79af2fd454d5f361 259 Pfam PF02674 Colicin V production protein 2 140 2.1E-26 T 25-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SMD_RS03695 e4934d17a0f8bc82cd9e81e841e50786 249 PANTHER PTHR30060 3 243 1.3E-96 T 25-04-2016 SMD_RS03695 e4934d17a0f8bc82cd9e81e841e50786 249 PANTHER PTHR30060:SF1 3 243 1.3E-96 T 25-04-2016 SMD_RS03695 e4934d17a0f8bc82cd9e81e841e50786 249 Pfam PF03741 Integral membrane protein TerC family 16 206 6.2E-49 T 25-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SMD_RS05860 a5d4545c5606f4f84af937380643db45 405 PANTHER PTHR23522 1 394 5.6E-115 T 25-04-2016 SMD_RS05860 a5d4545c5606f4f84af937380643db45 405 Pfam PF03825 Nucleoside H+ symporter 6 394 1.7E-114 T 25-04-2016 SMD_RS05860 a5d4545c5606f4f84af937380643db45 405 SUPERFAMILY SSF103473 7 395 5.36E-38 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMD_RS05860 a5d4545c5606f4f84af937380643db45 405 Gene3D G3DSA:1.20.1250.20 201 396 7.5E-25 T 25-04-2016 SMD_RS05860 a5d4545c5606f4f84af937380643db45 405 Gene3D G3DSA:1.20.1250.20 10 183 1.7E-14 T 25-04-2016 SMD_RS05860 a5d4545c5606f4f84af937380643db45 405 PANTHER PTHR23522:SF1 1 394 5.6E-115 T 25-04-2016 SMD_RS08795 594c5b57b125ff3108319f5db652d3ed 259 SUPERFAMILY SSF64167 1 249 3.4E-84 T 25-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMD_RS08795 594c5b57b125ff3108319f5db652d3ed 259 Pfam PF01975 Survival protein SurE 3 185 5.6E-58 T 25-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMD_RS08795 594c5b57b125ff3108319f5db652d3ed 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 1.0E-70 T 25-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMD_RS08795 594c5b57b125ff3108319f5db652d3ed 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 253 41.593 T 25-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMD_RS08795 594c5b57b125ff3108319f5db652d3ed 259 PANTHER PTHR30457 1 247 4.9E-97 T 25-04-2016 SMD_RS08795 594c5b57b125ff3108319f5db652d3ed 259 Gene3D G3DSA:3.40.1210.10 1 248 6.5E-90 T 25-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMD_RS14390 6bc9ecbfaf8ffc431d823b7db9fab315 80 Hamap MF_00715 Protein SlyX [slyX]. 12 80 14.151 T 25-04-2016 IPR007236 SlyX SMD_RS14390 6bc9ecbfaf8ffc431d823b7db9fab315 80 Pfam PF04102 SlyX 13 80 1.4E-14 T 25-04-2016 IPR007236 SlyX SMD_RS14390 6bc9ecbfaf8ffc431d823b7db9fab315 80 PANTHER PTHR36508 8 80 6.4E-18 T 25-04-2016 SMD_RS14390 6bc9ecbfaf8ffc431d823b7db9fab315 80 Gene3D G3DSA:1.20.5.300 7 59 9.5E-18 T 25-04-2016 SMD_RS07605 ea38d285098cec713f29f59767cf4bab 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 36 0.0011 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMD_RS07605 ea38d285098cec713f29f59767cf4bab 181 SUPERFAMILY SSF54523 20 159 6.43E-17 T 25-04-2016 SMD_RS07605 ea38d285098cec713f29f59767cf4bab 181 Pfam PF12019 Type II transport protein GspH 57 168 3.7E-16 T 25-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SMD_RS12650 38ca8d75fcdbbcf6729a3b04539d34e7 326 Pfam PF16220 Domain of unknown function (DUF4880) 16 57 1.5E-14 T 25-04-2016 IPR032623 FecR, N-terminal SMD_RS12650 38ca8d75fcdbbcf6729a3b04539d34e7 326 PIRSF PIRSF018266 6 325 2.6E-57 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS12650 38ca8d75fcdbbcf6729a3b04539d34e7 326 PANTHER PTHR30273 8 325 4.6E-30 T 25-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SMD_RS12650 38ca8d75fcdbbcf6729a3b04539d34e7 326 Pfam PF04773 FecR protein 123 214 7.3E-9 T 25-04-2016 IPR006860 FecR protein SMD_RS12650 38ca8d75fcdbbcf6729a3b04539d34e7 326 Pfam PF16344 Domain of unknown function (DUF4974) 225 314 1.0E-8 T 25-04-2016 IPR032508 Protein FecR, C-terminal SMD_RS07515 ed4251dee3e16913fc094ab7fe4b5968 333 PIRSF PIRSF028415 2 332 2.0E-134 T 25-04-2016 IPR014545 Uncharacterised conserved protein UCP028415 SMD_RS07515 ed4251dee3e16913fc094ab7fe4b5968 333 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 77 293 2.2E-102 T 25-04-2016 IPR019262 Domain of unknown function DUF2272 SMD_RS05300 bd44d9a15320836e7b970e4f8098808e 673 SUPERFAMILY SSF53474 511 643 6.46E-21 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05300 bd44d9a15320836e7b970e4f8098808e 673 SUPERFAMILY SSF53474 379 476 6.46E-21 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05300 bd44d9a15320836e7b970e4f8098808e 673 Gene3D G3DSA:3.40.50.1820 595 661 7.9E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05300 bd44d9a15320836e7b970e4f8098808e 673 Gene3D G3DSA:3.40.50.1820 511 535 7.9E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS05300 bd44d9a15320836e7b970e4f8098808e 673 Gene3D G3DSA:3.40.50.1820 382 478 7.9E-18 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS07765 3427e05068d47108545d05d2180ae958 94 Pfam PF11525 Copper resistance protein K 25 92 1.6E-32 T 25-04-2016 IPR021604 Copper resistance protein K GO:0046872 SMD_RS12175 7bec7ad421cad429a90089f364e17654 194 SUPERFAMILY SSF46689 12 73 1.3E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMD_RS12175 7bec7ad421cad429a90089f364e17654 194 Gene3D G3DSA:1.10.357.10 10 155 8.2E-18 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMD_RS15070 25f864b1479565be211fbc3af30dc0f0 320 Pfam PF01963 TraB family 46 311 4.8E-74 T 25-04-2016 IPR002816 Pheromone shutdown, TraB SMD_RS15070 25f864b1479565be211fbc3af30dc0f0 320 PANTHER PTHR40590 20 316 1.8E-63 T 25-04-2016 SMD_RS16680 8238c3eec528faa6221de5c8fc8d30ce 116 PANTHER PTHR38446:SF1 2 116 2.8E-31 T 25-04-2016 SMD_RS16680 8238c3eec528faa6221de5c8fc8d30ce 116 Pfam PF06993 Protein of unknown function (DUF1304) 10 112 2.2E-39 T 25-04-2016 IPR009732 Protein of unknown function DUF1304 SMD_RS16680 8238c3eec528faa6221de5c8fc8d30ce 116 PANTHER PTHR38446 2 116 2.8E-31 T 25-04-2016 SMD_RS09310 41c7df2841a4c80aa493794437d77178 256 Gene3D G3DSA:3.40.50.720 9 184 6.9E-20 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09310 41c7df2841a4c80aa493794437d77178 256 SUPERFAMILY SSF51735 9 198 2.99E-23 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS09310 41c7df2841a4c80aa493794437d77178 256 Pfam PF00106 short chain dehydrogenase 9 185 8.8E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMD_RS07150 f78eb1fa007f346294d6538842a99165 248 Pfam PF01925 Sulfite exporter TauE/SafE 12 241 4.4E-30 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMD_RS20310 7ce79a443afeef88c3fc7085443289bd 161 PANTHER PTHR28026 1 160 7.6E-61 T 25-04-2016 SMD_RS20310 7ce79a443afeef88c3fc7085443289bd 161 PANTHER PTHR28026:SF3 1 160 7.6E-61 T 25-04-2016 SMD_RS20310 7ce79a443afeef88c3fc7085443289bd 161 Pfam PF06127 Protein of unknown function (DUF962) 10 156 2.1E-25 T 25-04-2016 IPR009305 Protein of unknown function DUF962 SMD_RS03690 18059d64bd99ba5b24b9796d21366aa1 131 Gene3D G3DSA:1.10.3830.10 10 124 4.0E-41 T 25-04-2016 SMD_RS03690 18059d64bd99ba5b24b9796d21366aa1 131 PANTHER PTHR34299 1 124 1.4E-35 T 25-04-2016 SMD_RS03690 18059d64bd99ba5b24b9796d21366aa1 131 PANTHER PTHR34299:SF1 1 124 1.4E-35 T 25-04-2016 SMD_RS03690 18059d64bd99ba5b24b9796d21366aa1 131 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 120 1.1E-32 T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SMD_RS02875 35713bf9447186cadb5eb8a4baf911b7 291 Gene3D G3DSA:3.30.1330.60 202 275 7.0E-6 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS02875 35713bf9447186cadb5eb8a4baf911b7 291 SUPERFAMILY SSF103088 204 276 4.19E-7 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS02875 35713bf9447186cadb5eb8a4baf911b7 291 Pfam PF00691 OmpA family 207 277 6.7E-5 T 25-04-2016 IPR006665 OmpA-like domain SMD_RS13390 9f6ae1c101a51d5521c2899d1f6d02e8 296 Pfam PF04116 Fatty acid hydroxylase superfamily 109 243 7.8E-22 T 25-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 SMD_RS13390 9f6ae1c101a51d5521c2899d1f6d02e8 296 PANTHER PTHR11863 33 243 3.3E-25 T 25-04-2016 SMD_RS13390 9f6ae1c101a51d5521c2899d1f6d02e8 296 PANTHER PTHR11863:SF2 33 243 3.3E-25 T 25-04-2016 SMD_RS18545 e30daf08c77f7d6a3b49c3984b28af59 91 PANTHER PTHR33677 1 91 2.1E-30 T 25-04-2016 SMD_RS18545 e30daf08c77f7d6a3b49c3984b28af59 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 1.3E-21 T 25-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SMD_RS19115 1bdf885c1c72b1943a7913df1299ddba 177 SUPERFAMILY SSF55729 40 149 4.29E-17 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS19115 1bdf885c1c72b1943a7913df1299ddba 177 Gene3D G3DSA:3.40.630.30 32 147 7.1E-18 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS19115 1bdf885c1c72b1943a7913df1299ddba 177 Pfam PF00583 Acetyltransferase (GNAT) family 69 141 8.0E-8 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS08350 2b452254cf69a448e63dbfd68b012011 69 Gene3D G3DSA:1.10.260.40 2 48 3.1E-4 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS08350 2b452254cf69a448e63dbfd68b012011 69 SUPERFAMILY SSF47413 2 41 7.16E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS08730 197e2fdf6c0aa018d139ffa7b20abc1a 192 PANTHER PTHR13256 12 184 7.1E-49 T 25-04-2016 SMD_RS08730 197e2fdf6c0aa018d139ffa7b20abc1a 192 SUPERFAMILY SSF55729 11 181 3.67E-47 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS08730 197e2fdf6c0aa018d139ffa7b20abc1a 192 Gene3D G3DSA:3.40.630.30 11 182 9.2E-53 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMD_RS08730 197e2fdf6c0aa018d139ffa7b20abc1a 192 Pfam PF13302 Acetyltransferase (GNAT) domain 17 157 2.7E-32 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMD_RS08730 197e2fdf6c0aa018d139ffa7b20abc1a 192 PANTHER PTHR13256:SF43 12 184 7.1E-49 T 25-04-2016 SMD_RS20940 50c4ef0d32cc0805b70158561ac93090 538 Pfam PF13559 Domain of unknown function (DUF4129) 460 531 6.9E-10 T 25-04-2016 IPR025403 Domain of unknown function DUF4129 SMD_RS03650 925ca6668412a0c803ea4b9e3c65b33a 199 SUPERFAMILY SSF144064 16 187 5.49E-27 T 25-04-2016 SMD_RS21310 96d944c8a97693d34f083bc47c24e275 85 Pfam PF00550 Phosphopantetheine attachment site 9 62 1.4E-9 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS21310 96d944c8a97693d34f083bc47c24e275 85 SUPERFAMILY SSF47336 2 83 4.84E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS21310 96d944c8a97693d34f083bc47c24e275 85 Gene3D G3DSA:1.10.1200.10 2 83 1.1E-18 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 302 463 2.2E-46 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 Gene3D G3DSA:3.30.70.270 306 464 6.2E-52 T 25-04-2016 SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 PANTHER PTHR10799 185 462 3.7E-27 T 25-04-2016 SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 304 460 1.0E-44 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 SUPERFAMILY SSF55073 309 463 2.75E-46 T 25-04-2016 IPR029787 Nucleotide cyclase SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 SMART SM00267 293 465 2.1E-63 T 25-04-2016 IPR000160 GGDEF domain SMD_RS13575 aa84e2185c46067c52a56c31cc05a7b8 479 PANTHER PTHR10799:SF750 185 462 3.7E-27 T 25-04-2016 SMD_RS10555 60e250d53cf1403cdf5ff58fd1d9ec4b 970 SMART SM00609 31 159 0.0056 T 25-04-2016 IPR013694 VIT domain SMD_RS10555 60e250d53cf1403cdf5ff58fd1d9ec4b 970 SUPERFAMILY SSF48452 695 798 7.82E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS10555 60e250d53cf1403cdf5ff58fd1d9ec4b 970 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 908 955 2.4E-17 T 25-04-2016 IPR019220 Domain of unknown function DUF2135 SMD_RS10555 60e250d53cf1403cdf5ff58fd1d9ec4b 970 Gene3D G3DSA:1.25.40.10 696 803 8.4E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS10555 60e250d53cf1403cdf5ff58fd1d9ec4b 970 Pfam PF08487 Vault protein inter-alpha-trypsin domain 48 156 4.5E-20 T 25-04-2016 IPR013694 VIT domain SMD_RS17835 a426f1031c76591f0c18657ee4199570 165 Pfam PF04449 CS1 type fimbrial major subunit 25 162 8.9E-35 T 25-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 SMD_RS16960 3ab298f987eabf7f2502b20698310e37 336 Pfam PF04860 Phage portal protein 87 328 1.4E-11 T 25-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein SMD_RS16960 3ab298f987eabf7f2502b20698310e37 336 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 45 325 5.0E-62 T 25-04-2016 IPR006430 Phage portal protein PBSX family SMD_RS16960 3ab298f987eabf7f2502b20698310e37 336 PIRSF PIRSF018494 2 336 9.0E-134 T 25-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria SMD_RS05355 39a942392546fe9bb4d07f5ed07aafe5 70 Pfam PF14117 Domain of unknown function (DUF4287) 9 66 2.7E-26 T 25-04-2016 IPR025629 Protein of unknown function DUF4287 SMD_RS13285 7e9ff2439a4d9abe04fba69b483f834f 213 Gene3D G3DSA:3.40.1410.10 61 208 5.1E-21 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMD_RS13285 7e9ff2439a4d9abe04fba69b483f834f 213 SUPERFAMILY SSF64288 58 209 1.7E-22 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMD_RS20540 864702d559e7981b40bdd5fba9ab593f 144 Pfam PF12120 Rifampin ADP-ribosyl transferase 22 120 8.3E-50 T 25-04-2016 IPR021975 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase SMD_RS11640 cc495c9acc81cd0c593f1ce4426732b4 195 Gene3D G3DSA:3.40.50.150 22 148 2.4E-17 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS11640 cc495c9acc81cd0c593f1ce4426732b4 195 Pfam PF05401 Nodulation protein S (NodS) 13 136 1.4E-17 T 25-04-2016 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMD_RS11640 cc495c9acc81cd0c593f1ce4426732b4 195 SUPERFAMILY SSF53335 6 146 1.52E-24 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS08610 b151eeb18ab820e71d710d810b6ece05 130 PANTHER PTHR28259 6 130 8.7E-30 T 25-04-2016 SMD_RS08610 b151eeb18ab820e71d710d810b6ece05 130 TIGRFAM TIGR00494 crcB: protein CrcB 8 124 3.1E-26 T 25-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SMD_RS08610 b151eeb18ab820e71d710d810b6ece05 130 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 126 18.347 T 25-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SMD_RS08610 b151eeb18ab820e71d710d810b6ece05 130 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 121 4.2E-20 T 25-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SMD_RS03385 e575d05b385ebb5cbf8b33a3c0a05700 214 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 198 3.2E-26 T 25-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SMD_RS14790 bd4b2fd12c2aaf8687cee798bfb679aa 268 SUPERFAMILY SSF56317 1 258 2.22E-58 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS14790 bd4b2fd12c2aaf8687cee798bfb679aa 268 PANTHER PTHR23088:SF28 1 260 3.1E-143 T 25-04-2016 SMD_RS14790 bd4b2fd12c2aaf8687cee798bfb679aa 268 PANTHER PTHR23088 1 260 3.1E-143 T 25-04-2016 SMD_RS14790 bd4b2fd12c2aaf8687cee798bfb679aa 268 Gene3D G3DSA:3.60.110.10 1 260 4.3E-58 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS14790 bd4b2fd12c2aaf8687cee798bfb679aa 268 Pfam PF00795 Carbon-nitrogen hydrolase 6 248 4.1E-32 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMD_RS10070 d3e60da0af1f9b4345465a3521b827fd 168 Pfam PF11158 Protein of unknown function (DUF2938) 13 161 1.3E-65 T 25-04-2016 IPR021329 Protein of unknown function DUF2938 SMD_RS09385 46056082b866239a5a2abaa3210430e3 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 62 1.5E-14 T 25-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) SMD_RS09720 a6a56858bcd1cc409f98540a3e246afa 94 Pfam PF06305 Protein of unknown function (DUF1049) 23 78 2.4E-9 T 25-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SMD_RS13380 d067ab03e1d40ba3377691049bc9fe45 144 Gene3D G3DSA:3.10.180.10 34 140 6.2E-11 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS13380 d067ab03e1d40ba3377691049bc9fe45 144 SUPERFAMILY SSF54593 27 140 5.64E-13 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS06160 a413711b057f34df1a567df245c2515b 59 Pfam PF13783 Domain of unknown function (DUF4177) 5 55 5.3E-9 T 25-04-2016 IPR025234 Protein of unknown function DUF4177 SMD_RS12400 43ebc107d9ccbad80ad460c8fe578733 294 Pfam PF05425 Copper resistance protein D 183 287 2.9E-19 T 25-04-2016 IPR008457 Copper resistance protein D GO:0016021 SMD_RS12400 43ebc107d9ccbad80ad460c8fe578733 294 PANTHER PTHR34820 7 292 1.4E-16 T 25-04-2016 SMD_RS11815 724a205e1e96d0df9a039994fb96455b 258 PANTHER PTHR30151 27 258 3.6E-85 T 25-04-2016 SMD_RS11815 724a205e1e96d0df9a039994fb96455b 258 Gene3D G3DSA:1.10.3720.10 50 245 4.9E-20 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS11815 724a205e1e96d0df9a039994fb96455b 258 PANTHER PTHR30151:SF18 27 258 3.6E-85 T 25-04-2016 SMD_RS11815 724a205e1e96d0df9a039994fb96455b 258 SUPERFAMILY SSF161098 53 238 1.7E-28 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS11815 724a205e1e96d0df9a039994fb96455b 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 245 3.7E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMD_RS07965 dd1d9fe1f657852496523a6eed913034 127 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 35 109 4.8E-28 T 25-04-2016 IPR019110 Uncharacterised protein family, RAQPRD SMD_RS07965 dd1d9fe1f657852496523a6eed913034 127 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 18 110 3.8E-35 T 25-04-2016 IPR019110 Uncharacterised protein family, RAQPRD SMD_RS21400 1ce3d0f5f9e932968a996ddd100260cb 94 Pfam PF11191 Protein of unknown function (DUF2782) 39 94 2.8E-17 T 25-04-2016 IPR021357 Protein of unknown function DUF2782 SMD_RS01465 84ecb1d41ab0463b4d4ee2c23b6d0fdc 201 Pfam PF06805 Bacteriophage lambda tail assembly protein I 7 88 8.2E-9 T 25-04-2016 IPR010654 Bacteriophage lambda tail assembly I SMD_RS14100 44f077be11a793e3c80e95872413f533 181 Pfam PF13279 Thioesterase-like superfamily 33 150 8.8E-22 T 25-04-2016 SMD_RS14100 44f077be11a793e3c80e95872413f533 181 SUPERFAMILY SSF54637 28 151 1.75E-23 T 25-04-2016 IPR029069 HotDog domain SMD_RS14100 44f077be11a793e3c80e95872413f533 181 Gene3D G3DSA:3.10.129.10 25 150 2.1E-18 T 25-04-2016 IPR029069 HotDog domain SMD_RS14100 44f077be11a793e3c80e95872413f533 181 PANTHER PTHR12475 27 105 9.8E-22 T 25-04-2016 SMD_RS14100 44f077be11a793e3c80e95872413f533 181 PANTHER PTHR12475:SF4 27 105 9.8E-22 T 25-04-2016 SMD_RS00750 58414c18bfb53429a9b59685b56c430d 431 Pfam PF07219 HemY protein N-terminus 33 131 1.0E-18 T 25-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 SMD_RS00750 58414c18bfb53429a9b59685b56c430d 431 Gene3D G3DSA:1.25.40.10 320 386 1.5E-4 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00750 58414c18bfb53429a9b59685b56c430d 431 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 8 377 5.5E-43 T 25-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 SMD_RS05235 930500a7ca15ae839689fa7322d1b9ba 131 Pfam PF11162 Protein of unknown function (DUF2946) 3 126 1.6E-5 T 25-04-2016 IPR021333 Protein of unknown function DUF2946 SMD_RS14305 6996ec1de43c9e05f88e2b057d15d8f9 228 PANTHER PTHR36452 4 228 1.8E-39 T 25-04-2016 SMD_RS14305 6996ec1de43c9e05f88e2b057d15d8f9 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 219 4.1E-59 T 25-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SMD_RS14305 6996ec1de43c9e05f88e2b057d15d8f9 228 PANTHER PTHR36452:SF1 4 228 1.8E-39 T 25-04-2016 SMD_RS14305 6996ec1de43c9e05f88e2b057d15d8f9 228 PIRSF PIRSF028451 1 228 5.4E-90 T 25-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 SMD_RS14305 6996ec1de43c9e05f88e2b057d15d8f9 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 225 6.4E-78 T 25-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SMD_RS19610 1c98264ac6c03465daf2b85e0ac89d83 512 PANTHER PTHR34473:SF1 16 500 1.5E-104 T 25-04-2016 SMD_RS19610 1c98264ac6c03465daf2b85e0ac89d83 512 Pfam PF03703 Bacterial PH domain 273 351 7.2E-11 T 25-04-2016 IPR005182 Domain of unknown function DUF304 SMD_RS19610 1c98264ac6c03465daf2b85e0ac89d83 512 Pfam PF03703 Bacterial PH domain 423 500 8.7E-11 T 25-04-2016 IPR005182 Domain of unknown function DUF304 SMD_RS19610 1c98264ac6c03465daf2b85e0ac89d83 512 Pfam PF03703 Bacterial PH domain 77 153 3.1E-19 T 25-04-2016 IPR005182 Domain of unknown function DUF304 SMD_RS19610 1c98264ac6c03465daf2b85e0ac89d83 512 PIRSF PIRSF026631 14 512 2.0E-99 T 25-04-2016 IPR014529 Uncharacterised conserved protein UCP026631 SMD_RS19610 1c98264ac6c03465daf2b85e0ac89d83 512 PANTHER PTHR34473 16 500 1.5E-104 T 25-04-2016 SMD_RS09010 93697a7e8f3016fb76960428b7175d5f 222 PANTHER PTHR37314 1 203 4.4E-14 T 25-04-2016 SMD_RS09010 93697a7e8f3016fb76960428b7175d5f 222 Pfam PF06912 Protein of unknown function (DUF1275) 13 207 1.4E-36 T 25-04-2016 IPR010699 Protein of unknown function DUF1275 SMD_RS07880 e29dc8ba25e6aa0a56df9033a5bc9c8e 210 Pfam PF08808 RES domain 29 177 1.4E-21 T 25-04-2016 IPR014914 RES domain SMD_RS07880 e29dc8ba25e6aa0a56df9033a5bc9c8e 210 SMART SM00953 28 175 3.2E-15 T 25-04-2016 IPR014914 RES domain SMD_RS07285 7766311b050dc2cb967083423e706791 267 SUPERFAMILY SSF55811 103 256 2.71E-32 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS07285 7766311b050dc2cb967083423e706791 267 PANTHER PTHR12992 91 259 1.9E-50 T 25-04-2016 SMD_RS07285 7766311b050dc2cb967083423e706791 267 Pfam PF06945 Protein of unknown function (DUF1289) 10 53 6.2E-17 T 25-04-2016 IPR010710 Protein of unknown function DUF1289 SMD_RS07285 7766311b050dc2cb967083423e706791 267 Pfam PF00293 NUDIX domain 110 220 3.6E-12 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMD_RS07285 7766311b050dc2cb967083423e706791 267 Gene3D G3DSA:3.90.79.10 100 263 1.8E-34 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMD_RS03250 6cdd7c09493ae1512ef693b112d89af9 733 Pfam PF03170 Bacterial cellulose synthase subunit 46 177 2.1E-6 T 25-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 SMD_RS20970 2ca39be045a2d3097800e63c14c739aa 190 Pfam PF06693 Protein of unknown function (DUF1190) 30 185 8.6E-35 T 25-04-2016 IPR009576 Biofilm formation YgiB SMD_RS07025 f510924b4236bb3c9729b9499d03a21b 232 SUPERFAMILY SSF49354 16 127 2.22E-8 T 25-04-2016 IPR008962 PapD-like SMD_RS12065 b3ad5af273c46a2ab9f8406eacc1fd92 73 Pfam PF04505 Interferon-induced transmembrane protein 1 59 6.4E-12 T 25-04-2016 IPR007593 CD225/Dispanin family GO:0009607|GO:0016021 SMD_RS02075 489102498fd7682d00bac23242ec35cf 269 SUPERFAMILY SSF159501 26 186 1.57E-5 T 25-04-2016 SMD_RS01385 5c72c792e98df5b5bb150adf0dd33d16 170 Pfam PF05135 Phage gp6-like head-tail connector protein 4 65 1.1E-10 T 25-04-2016 IPR021146 Phage gp6-like head-tail connector protein SMD_RS19230 1774cf916eec8d259fe0e5e6812f9bc1 258 Pfam PF04338 Protein of unknown function, DUF481 39 257 6.9E-64 T 25-04-2016 IPR007433 Protein of unknown function DUF481 SMD_RS05790 7a03b2f99511e821d9db4b38a5310665 128 Pfam PF07179 SseB protein N-terminal domain 11 118 5.0E-6 T 25-04-2016 IPR009839 SseB protein N-terminal domain SMD_RS00835 f78a5975aecf2fdaf84188c681e69593 90 SUPERFAMILY SSF58042 29 72 6.75E-6 T 25-04-2016 SMD_RS00835 f78a5975aecf2fdaf84188c681e69593 90 Gene3D G3DSA:1.10.287.950 32 79 6.6E-4 T 25-04-2016 SMD_RS04755 41640c0d57f7c320767ce968e533d647 87 Gene3D G3DSA:1.10.1220.10 40 77 1.9E-6 T 25-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SMD_RS04755 41640c0d57f7c320767ce968e533d647 87 SUPERFAMILY SSF47598 40 81 3.45E-8 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SMD_RS05775 61ea06df040c4882443875825e51f499 730 Pfam PF06202 Amylo-alpha-1,6-glucosidase 103 288 2.6E-4 T 25-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SMD_RS05775 61ea06df040c4882443875825e51f499 730 SUPERFAMILY SSF48208 95 453 4.37E-37 T 25-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMD_RS05775 61ea06df040c4882443875825e51f499 730 Gene3D G3DSA:1.50.10.10 106 296 2.6E-7 T 25-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMD_RS22010 78df7ad55a09f52c43c54314328886c0 1795 Gene3D G3DSA:2.60.40.10 1412 1456 1.5E-4 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMD_RS22010 78df7ad55a09f52c43c54314328886c0 1795 SUPERFAMILY SSF49265 1518 1632 2.52E-5 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS22010 78df7ad55a09f52c43c54314328886c0 1795 SUPERFAMILY SSF49265 1342 1455 3.29E-5 T 25-04-2016 IPR003961 Fibronectin type III GO:0005515 SMD_RS08195 5f6ae5c523287cd452f0d124f689705b 211 Gene3D G3DSA:1.20.1510.10 23 202 1.1E-18 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMD_RS08195 5f6ae5c523287cd452f0d124f689705b 211 SUPERFAMILY SSF161111 23 202 6.54E-30 T 25-04-2016 SMD_RS08195 5f6ae5c523287cd452f0d124f689705b 211 PANTHER PTHR11562 1 203 8.3E-13 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS08195 5f6ae5c523287cd452f0d124f689705b 211 Pfam PF01545 Cation efflux family 28 202 2.4E-12 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMD_RS17645 7b3a425f72d73fcb2ebc3ac0e50bb28e 380 Gene3D G3DSA:2.60.120.380 29 135 2.9E-5 T 25-04-2016 SMD_RS04760 10332513d6c1b5750e1ae2ef5fe29596 184 Pfam PF11000 Protein of unknown function (DUF2840) 35 181 1.3E-60 T 25-04-2016 IPR021263 Protein of unknown function DUF2840 SMD_RS07330 0ed2c2b69eaac1d7dadfc12c395d5479 292 Gene3D G3DSA:1.20.5.170 264 292 9.9E-4 T 25-04-2016 SMD_RS07525 ce69e4ddc532c18644928f9d26b5a0cc 89 Pfam PF03966 Trm112p-like protein 2 68 7.4E-6 T 25-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SMD_RS07525 ce69e4ddc532c18644928f9d26b5a0cc 89 Gene3D G3DSA:2.20.25.10 9 79 1.1E-6 T 25-04-2016 SMD_RS07525 ce69e4ddc532c18644928f9d26b5a0cc 89 SUPERFAMILY SSF158997 52 80 1.44E-7 T 25-04-2016 SMD_RS07525 ce69e4ddc532c18644928f9d26b5a0cc 89 SUPERFAMILY SSF158997 1 24 1.44E-7 T 25-04-2016 SMD_RS11570 01265f9ecd7c131b919ac527ae0e15c5 149 SUPERFAMILY SSF54975 22 108 9.48E-19 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMD_RS11570 01265f9ecd7c131b919ac527ae0e15c5 149 Pfam PF04940 Sensors of blue-light using FAD 5 101 1.9E-22 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS11570 01265f9ecd7c131b919ac527ae0e15c5 149 SMART SM01034 3 102 1.4E-8 T 25-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 SMD_RS17625 8e1bb3b9c9d832b9d3dc71a4a0554db6 139 Pfam PF11162 Protein of unknown function (DUF2946) 14 133 1.6E-10 T 25-04-2016 IPR021333 Protein of unknown function DUF2946 SMD_RS17340 ca984f5eda8fd9c4b823b29d554f9c20 273 Pfam PF11219 Protein of unknown function (DUF3014) 112 268 4.6E-51 T 25-04-2016 IPR021382 Protein of unknown function DUF3014 SMD_RS11580 189d3e894df021bfb2a1e03c892633f5 165 SUPERFAMILY SSF47240 1 154 9.93E-58 T 25-04-2016 IPR009078 Ferritin-like superfamily SMD_RS11580 189d3e894df021bfb2a1e03c892633f5 165 PANTHER PTHR30565 1 165 6.0E-75 T 25-04-2016 SMD_RS11580 189d3e894df021bfb2a1e03c892633f5 165 Pfam PF05974 Domain of unknown function (DUF892) 5 161 3.2E-62 T 25-04-2016 IPR010287 Domain of unknown function DUF892 SMD_RS11580 189d3e894df021bfb2a1e03c892633f5 165 Gene3D G3DSA:1.20.1260.10 1 162 7.5E-70 T 25-04-2016 IPR012347 Ferritin-related SMD_RS05525 c534c3194b027196896c858510b11b86 379 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 37 272 3.8E-63 T 25-04-2016 IPR018642 Protein of unknown function DUF2066 SMD_RS12345 c94d90f4e0b7a42e0861b01f7c63ee83 183 Pfam PF11736 Protein of unknown function (DUF3299) 46 181 1.2E-40 T 25-04-2016 IPR021727 Protein of unknown function DUF3299 SMD_RS20610 f46e804d29b2ef2cbe97855d2c42d87d 146 PIRSF PIRSF029509 1 146 8.9E-36 T 25-04-2016 IPR016923 Uncharacterised conserved protein UCP029509, membrane SMD_RS12390 00c19d7dffc4e784edf3206385f8fa4f 107 Gene3D G3DSA:2.40.128.20 10 78 8.9E-6 T 25-04-2016 IPR012674 Calycin SMD_RS12390 00c19d7dffc4e784edf3206385f8fa4f 107 SUPERFAMILY SSF50814 7 82 8.03E-6 T 25-04-2016 IPR011038 Calycin-like SMD_RS07585 7bb553fe4fa1188c42558b1ceb36cd97 173 Pfam PF14341 PilX N-terminal 19 67 1.6E-7 T 25-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain SMD_RS00760 c079f859a65ba1d777bcb2d548eff762 269 Pfam PF02602 Uroporphyrinogen-III synthase HemD 36 257 3.1E-26 T 25-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS00760 c079f859a65ba1d777bcb2d548eff762 269 Gene3D G3DSA:3.40.50.10090 26 131 1.6E-10 T 25-04-2016 SMD_RS00760 c079f859a65ba1d777bcb2d548eff762 269 Gene3D G3DSA:3.40.50.10090 137 259 7.2E-7 T 25-04-2016 SMD_RS00760 c079f859a65ba1d777bcb2d548eff762 269 PANTHER PTHR38042 15 269 1.1E-55 T 25-04-2016 SMD_RS00760 c079f859a65ba1d777bcb2d548eff762 269 SUPERFAMILY SSF69618 20 259 5.89E-43 T 25-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMD_RS00760 c079f859a65ba1d777bcb2d548eff762 269 PANTHER PTHR38042:SF1 15 269 1.1E-55 T 25-04-2016 SMD_RS00420 3bcb8226190295ead749658d3a241abe 67 Pfam PF04325 Protein of unknown function (DUF465) 15 58 1.0E-12 T 25-04-2016 IPR007420 Protein of unknown function DUF465 SMD_RS05920 4f6355d9656f386bd99fd74fe686cf6b 155 Pfam PF11188 Protein of unknown function (DUF2975) 47 155 2.2E-15 T 25-04-2016 IPR021354 Protein of unknown function DUF2975 SMD_RS00910 9cfbb1204e97ac16ea161434cbc9cf22 218 Pfam PF13795 HupE / UreJ protein 36 186 2.7E-51 T 25-04-2016 IPR032809 Putative HupE/UreJ protein SMD_RS12220 031151d9200e378f682ec7eb88624371 99 ProSitePatterns PS00018 EF-hand calcium-binding domain. 77 89 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS12220 031151d9200e378f682ec7eb88624371 99 ProSitePatterns PS00018 EF-hand calcium-binding domain. 50 62 - T 25-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMD_RS12220 031151d9200e378f682ec7eb88624371 99 SUPERFAMILY SSF47473 46 91 2.33E-5 T 25-04-2016 IPR011992 EF-hand domain pair SMD_RS05370 18ddb02ab4e3215095f022f53cf0c18e 595 Pfam PF13687 Domain of unknown function (DUF4153) 154 390 3.1E-21 T 25-04-2016 IPR025291 Protein of unknown function DUF4153 SMD_RS07435 d41f025e14ee82a49d227f7e18e50833 201 Gene3D G3DSA:3.30.300.50 51 110 8.5E-4 T 25-04-2016 SMD_RS15645 ed8c9c3082ce0693c508999032cdc906 274 Pfam PF11227 Protein of unknown function (DUF3025) 66 265 4.8E-55 T 25-04-2016 IPR021390 Protein of unknown function DUF3025 SMD_RS15590 58f240d15611ba81fc502dbd69613ae7 670 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 627 669 7.0E-12 T 25-04-2016 IPR020011 Motility protein FimV, C-terminal SMD_RS15590 58f240d15611ba81fc502dbd69613ae7 670 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 214 287 2.1E-19 T 25-04-2016 IPR020012 Motility protein FimV, N-terminal SMD_RS19805 8eb05c0c601a5eba830cfccf292ca9c0 387 Gene3D G3DSA:3.40.710.10 13 356 1.3E-55 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS19805 8eb05c0c601a5eba830cfccf292ca9c0 387 PANTHER PTHR22935 7 352 6.9E-35 T 25-04-2016 SMD_RS19805 8eb05c0c601a5eba830cfccf292ca9c0 387 Pfam PF00144 Beta-lactamase 30 354 3.1E-36 T 25-04-2016 IPR001466 Beta-lactamase-related SMD_RS19805 8eb05c0c601a5eba830cfccf292ca9c0 387 SUPERFAMILY SSF56601 27 360 1.02E-51 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMD_RS12215 9d4e2ba36aa0d4d3fa9110dd57a49870 244 SUPERFAMILY SSF49354 35 165 2.88E-6 T 25-04-2016 IPR008962 PapD-like SMD_RS21270 d8122d6622857fcd431edf80a147deba 209 SUPERFAMILY SSF89392 30 193 5.1E-16 T 25-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SMD_RS21270 d8122d6622857fcd431edf80a147deba 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 43 196 3.2E-16 T 25-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SMD_RS21270 d8122d6622857fcd431edf80a147deba 209 Gene3D G3DSA:2.50.20.10 31 196 2.5E-17 T 25-04-2016 SMD_RS06645 c6440cdaf730cd8fcc8018a86d80bc26 224 Pfam PF04493 Endonuclease V 23 217 8.4E-69 T 25-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SMD_RS06645 c6440cdaf730cd8fcc8018a86d80bc26 224 PANTHER PTHR28511 10 222 4.5E-71 T 25-04-2016 SMD_RS06645 c6440cdaf730cd8fcc8018a86d80bc26 224 PANTHER PTHR28511:SF1 10 222 4.5E-71 T 25-04-2016 SMD_RS06645 c6440cdaf730cd8fcc8018a86d80bc26 224 Hamap MF_00801 Endonuclease V [nfi]. 13 224 33.793 T 25-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SMD_RS22040 2d2ccff7c2f5540a57510c89b75be3cc 293 PANTHER PTHR35243 171 291 6.1E-27 T 25-04-2016 SMD_RS19275 a05ccb9a2aa774c7c58c1cb0a2b3ffb5 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 160 9.8E-24 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMD_RS19275 a05ccb9a2aa774c7c58c1cb0a2b3ffb5 297 PANTHER PTHR10366 2 268 3.2E-45 T 25-04-2016 SMD_RS19275 a05ccb9a2aa774c7c58c1cb0a2b3ffb5 297 Gene3D G3DSA:3.40.50.720 1 276 6.3E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS19275 a05ccb9a2aa774c7c58c1cb0a2b3ffb5 297 SUPERFAMILY SSF51735 1 277 1.25E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain SMD_RS19275 a05ccb9a2aa774c7c58c1cb0a2b3ffb5 297 PANTHER PTHR10366:SF448 2 268 3.2E-45 T 25-04-2016 SMD_RS12070 84cc02c41557a42c299a9e5c8d7f0bd5 379 Pfam PF13421 SPFH domain-Band 7 family 56 188 3.5E-8 T 25-04-2016 SMD_RS03410 64889bffe4b6efa937bd8af4556e666c 159 Pfam PF10517 Electron transfer DM13 60 153 8.8E-21 T 25-04-2016 IPR019545 DM13 domain SMD_RS00590 b1f708e6b46a727c4f4ce4542371ec71 201 SUPERFAMILY SSF48452 58 170 5.06E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS00590 b1f708e6b46a727c4f4ce4542371ec71 201 Pfam PF13432 Tetratricopeptide repeat 43 89 0.0019 T 25-04-2016 SMD_RS00590 b1f708e6b46a727c4f4ce4542371ec71 201 Gene3D G3DSA:1.25.40.10 60 163 3.1E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMD_RS16720 139bbbd151c3212ac7887b07a52f0e1e 100 PANTHER PTHR34205 3 100 8.5E-47 T 25-04-2016 SMD_RS16720 139bbbd151c3212ac7887b07a52f0e1e 100 Pfam PF06127 Protein of unknown function (DUF962) 4 97 2.5E-36 T 25-04-2016 IPR009305 Protein of unknown function DUF962 SMD_RS12015 f922fa2c018214d9ec7f9e6f8f50716f 96 Pfam PF11747 Killing trait 11 77 7.8E-29 T 25-04-2016 IPR021070 Killing trait, RebB SMD_RS05905 ca35109e041f3887ec7fee585afcaf5d 464 Pfam PF11066 Protein of unknown function (DUF2867) 280 436 1.1E-19 T 25-04-2016 IPR021295 Protein of unknown function DUF2867 SMD_RS19320 4eb3bfeffd93b9a1bcb60ba47be23d5b 137 SUPERFAMILY SSF102405 15 94 1.14E-5 T 25-04-2016 SMD_RS17670 59169043bf474994552300017e2293fd 458 Pfam PF13163 Protein of unknown function (DUF3999) 29 449 2.1E-114 T 25-04-2016 IPR025060 Protein of unknown function DUF3999 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 Gene3D G3DSA:1.10.287.70 9 73 4.4E-19 T 25-04-2016 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 Gene3D G3DSA:1.20.120.80 77 290 4.1E-67 T 25-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 SUPERFAMILY SSF81452 9 291 1.0E-84 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 Pfam PF00510 Cytochrome c oxidase subunit III 150 290 9.9E-47 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 Pfam PF00510 Cytochrome c oxidase subunit III 11 107 3.6E-15 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 PANTHER PTHR11403 136 291 2.5E-118 T 25-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 PANTHER PTHR11403 2 118 2.5E-118 T 25-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 PANTHER PTHR11403:SF0 136 291 2.5E-118 T 25-04-2016 SMD_RS02045 193181d2b2b268fea75b3617d20c0a63 291 PANTHER PTHR11403:SF0 2 118 2.5E-118 T 25-04-2016 SMD_RS09865 279094094bbd81bfd5020c34108ba8e5 191 Gene3D G3DSA:3.40.50.1000 64 158 9.6E-13 T 25-04-2016 IPR023214 HAD-like domain SMD_RS09865 279094094bbd81bfd5020c34108ba8e5 191 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 59 159 4.5E-9 T 25-04-2016 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.-|Reactome: REACT_1698 SMD_RS09865 279094094bbd81bfd5020c34108ba8e5 191 SUPERFAMILY SSF56784 28 168 4.12E-14 T 25-04-2016 IPR023214 HAD-like domain SMD_RS20345 f68ece2901ac706909d8e0dddad33583 319 PANTHER PTHR10846 24 315 3.9E-12 T 25-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SMD_RS20345 f68ece2901ac706909d8e0dddad33583 319 Pfam PF01699 Sodium/calcium exchanger protein 5 144 2.6E-19 T 25-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS20345 f68ece2901ac706909d8e0dddad33583 319 Pfam PF01699 Sodium/calcium exchanger protein 176 311 3.6E-19 T 25-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMD_RS01455 c1916b53bdfe2ce04c64ffefb1a18897 231 Pfam PF05100 Phage minor tail protein L 24 228 7.2E-77 T 25-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail SMD_RS01455 c1916b53bdfe2ce04c64ffefb1a18897 231 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 5 227 1.6E-87 T 25-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail SMD_RS07950 8a40ace4213f0e35b73fea2474100228 132 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 3.7E-42 T 25-04-2016 IPR021877 Protein of unknown function DUF3487 SMD_RS07950 8a40ace4213f0e35b73fea2474100228 132 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 3.2E-43 T 25-04-2016 IPR021877 Protein of unknown function DUF3487 SMD_RS16520 b950df0a6ba032b32dfc5ac26a72015b 67 Pfam PF07311 Dodecin 3 67 2.8E-21 T 25-04-2016 IPR009923 Dodecin SMD_RS16520 b950df0a6ba032b32dfc5ac26a72015b 67 SUPERFAMILY SSF89807 1 67 1.57E-17 T 25-04-2016 IPR009923 Dodecin SMD_RS16520 b950df0a6ba032b32dfc5ac26a72015b 67 Gene3D G3DSA:3.30.1660.10 2 67 2.2E-18 T 25-04-2016 IPR025543 Dodecin-like SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 PANTHER PTHR33446 51 239 1.3E-15 T 25-04-2016 SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 235 1.4E-17 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 Gene3D G3DSA:3.30.1150.10 127 238 7.6E-21 T 25-04-2016 SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 PANTHER PTHR33446:SF2 51 239 1.3E-15 T 25-04-2016 SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 236 1.5E-18 T 25-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 SUPERFAMILY SSF74653 135 235 9.16E-18 T 25-04-2016 SMD_RS18130 546d56d75c26ce5ab3cbf6664a6fa577 240 SUPERFAMILY SSF74653 96 104 9.16E-18 T 25-04-2016 SMD_RS12500 15d7c543fff30c06f3e23a7ac7ad6d93 254 SUPERFAMILY SSF56925 107 253 6.04E-20 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMD_RS12365 d07d14bc71b79830b083713cae53a5d7 158 Pfam PF03203 MerC mercury resistance protein 26 152 5.5E-15 T 25-04-2016 IPR004891 MerC mercury resistance protein SMD_RS20180 972c34cc92ad962ec752d808bff37974 205 Pfam PF13548 Domain of unknown function (DUF4126) 9 175 3.0E-46 T 25-04-2016 IPR025196 Domain of unknown function DUF4126 SMD_RS13080 d7b801a8cf3fd90c8ca1247c88b0a60f 306 Gene3D G3DSA:3.40.630.10 13 212 1.5E-60 T 25-04-2016 SMD_RS13080 d7b801a8cf3fd90c8ca1247c88b0a60f 306 Gene3D G3DSA:3.40.630.10 249 302 1.5E-60 T 25-04-2016 SMD_RS13080 d7b801a8cf3fd90c8ca1247c88b0a60f 306 Pfam PF10994 Protein of unknown function (DUF2817) 83 144 2.2E-7 T 25-04-2016 IPR021259 Protein of unknown function DUF2817 SMD_RS13080 d7b801a8cf3fd90c8ca1247c88b0a60f 306 SUPERFAMILY SSF53187 34 299 4.3E-34 T 25-04-2016 SMD_RS19335 572c9e47774768474852152d681e69df 404 PANTHER PTHR30572 160 404 8.8E-24 T 25-04-2016 SMD_RS19335 572c9e47774768474852152d681e69df 404 Pfam PF02687 FtsX-like permease family 286 395 5.2E-16 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMD_RS21885 33896da4c50f601ca0ffc459e41c0bc7 522 Pfam PF02646 RmuC family 201 496 1.9E-82 T 25-04-2016 IPR003798 DNA recombination RmuC SMD_RS21885 33896da4c50f601ca0ffc459e41c0bc7 522 PANTHER PTHR30563 19 517 5.0E-79 T 25-04-2016 SMD_RS07960 f5c34d7a06e0d8cf50de69b80a023374 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 7.7E-32 T 25-04-2016 IPR021676 Protein of unknown function DUF3262 SMD_RS07960 f5c34d7a06e0d8cf50de69b80a023374 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 5.6E-26 T 25-04-2016 IPR021676 Protein of unknown function DUF3262 SMD_RS04695 f4ae3b18772b40070a7ae02a66f54625 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 1.1E-58 T 25-04-2016 IPR026325 Protein of unknown function DUF932 SMD_RS00790 c34ff51e65d3e62610155f3f531f7e88 158 Gene3D G3DSA:3.10.450.50 44 144 1.8E-12 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS00790 c34ff51e65d3e62610155f3f531f7e88 158 SUPERFAMILY SSF54427 41 155 2.51E-20 T 25-04-2016 IPR032710 NTF2-like domain SMD_RS00790 c34ff51e65d3e62610155f3f531f7e88 158 Pfam PF14534 Domain of unknown function (DUF4440) 44 144 1.2E-10 T 25-04-2016 IPR027843 Domain of unknown function DUF4440 SMD_RS20480 d5bfba35e868bfdc65ab86a42b2d51da 96 Pfam PF13670 Peptidase propeptide and YPEB domain 7 93 4.1E-8 T 25-04-2016 IPR025711 PepSY domain SMD_RS02880 1b7d68a7da6fb58b4d1d7eb229ebafd4 78 Pfam PF04325 Protein of unknown function (DUF465) 20 66 1.7E-11 T 25-04-2016 IPR007420 Protein of unknown function DUF465 SMD_RS01875 5960a2928c3a2502f0cdc81fc47e36c4 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 28 4.2E-8 T 25-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 SMD_RS02820 d3599d42591dd23ed5b737832ac0d55a 115 Pfam PF09361 Phasin protein 8 103 3.3E-9 T 25-04-2016 IPR018968 Phasin SMD_RS13620 8d2fccec56afa6b9d95a6f5e524537bd 122 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 28 100 9.0E-22 T 25-04-2016 SMD_RS07360 bac7c89c3dd500edcc87b85eb7b70833 520 Pfam PF05231 MASE1 23 288 9.2E-10 T 25-04-2016 IPR007895 MASE1 SMD_RS12910 c1c1120778ef0bd9c5f03be0361e9d85 127 Pfam PF11445 Protein of unknown function (DUF2894) 27 103 7.8E-25 T 25-04-2016 IPR021549 Protein of unknown function DUF2894 SMD_RS12035 3cf242cd4cfe96be9baef5979ea68bcc 78 Pfam PF11747 Killing trait 21 74 3.6E-13 T 25-04-2016 IPR021070 Killing trait, RebB SMD_RS21325 740f299ece616fbe3c322e223da34245 337 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 214 5.8E-40 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SMD_RS21325 740f299ece616fbe3c322e223da34245 337 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 3.5E-94 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SMD_RS21325 740f299ece616fbe3c322e223da34245 337 PANTHER PTHR30365:SF4 1 337 4.3E-158 T 25-04-2016 SMD_RS21325 740f299ece616fbe3c322e223da34245 337 PANTHER PTHR30365 1 337 4.3E-158 T 25-04-2016 SMD_RS13030 7f4d5a4890fc1f947e3c60e6f4e59d4d 159 SUPERFAMILY SSF52218 3 149 9.22E-21 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS13030 7f4d5a4890fc1f947e3c60e6f4e59d4d 159 Pfam PF00258 Flavodoxin 7 109 1.4E-7 T 25-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SMD_RS13030 7f4d5a4890fc1f947e3c60e6f4e59d4d 159 Gene3D G3DSA:3.40.50.360 3 143 2.3E-22 T 25-04-2016 IPR029039 Flavoprotein-like domain SMD_RS14645 b2a42b217d6e36372f585ca73930ec16 208 Gene3D G3DSA:1.20.1540.10 6 188 3.7E-34 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS14645 b2a42b217d6e36372f585ca73930ec16 208 PANTHER PTHR22936 31 190 3.6E-24 T 25-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SMD_RS14645 b2a42b217d6e36372f585ca73930ec16 208 SUPERFAMILY SSF144091 5 187 1.31E-32 T 25-04-2016 SMD_RS14645 b2a42b217d6e36372f585ca73930ec16 208 Pfam PF01694 Rhomboid family 38 186 3.6E-24 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMD_RS10085 274e7cc8c1031f3c8d6e1d506cf8c89b 344 Pfam PF04235 Protein of unknown function (DUF418) 196 343 1.4E-12 T 25-04-2016 IPR007349 Domain of unknown function DUF418 SMD_RS10085 274e7cc8c1031f3c8d6e1d506cf8c89b 344 PANTHER PTHR30590 1 343 7.6E-23 T 25-04-2016 SMD_RS05015 1be626b4b401cd43be055816e06cc3f2 127 Pfam PF02643 Uncharacterized ACR, COG1430 17 102 2.3E-12 T 25-04-2016 IPR003795 Protein of unknown function DUF192 SMD_RS01495 ac644e3ff145f26f657d1623870f2e25 197 Pfam PF07007 Protein of unknown function (DUF1311) 101 191 2.2E-7 T 25-04-2016 IPR009739 Protein of unknown function DUF1311 SMD_RS01585 d85b27b21d18a704f3f3a6eeab3e7198 256 Pfam PF11218 Protein of unknown function (DUF3011) 129 189 2.9E-19 T 25-04-2016 IPR021381 Protein of unknown function DUF3011 SMD_RS20475 1fcd62c1efb2f6ff80e1d8b5a11662f3 144 Pfam PF13670 Peptidase propeptide and YPEB domain 6 76 4.3E-12 T 25-04-2016 IPR025711 PepSY domain SMD_RS20475 1fcd62c1efb2f6ff80e1d8b5a11662f3 144 Pfam PF13670 Peptidase propeptide and YPEB domain 83 137 2.1E-5 T 25-04-2016 IPR025711 PepSY domain SMD_RS10500 60327a7ba05e3a713aed052107db6c18 153 Pfam PF14137 Domain of unknown function (DUF4304) 8 84 4.4E-13 T 25-04-2016 IPR025412 Protein of unknown function DUF4304 SMD_RS18055 eabda12c591c2ba3616b6cbe502c9acb 330 Pfam PF12889 Protein of unknown function (DUF3829) 49 329 1.5E-87 T 25-04-2016 IPR024291 Protein of unknown function DUF3829 SMD_RS10880 cd78224e67a6889a912c117b72ea7613 192 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 48 190 5.2E-59 T 25-04-2016 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain SMD_RS01415 1efbe406b41e76f0e80e53464d479b5a 454 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 244 313 4.7E-19 T 25-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal SMD_RS01415 1efbe406b41e76f0e80e53464d479b5a 454 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 116 183 1.5E-12 T 25-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal SMD_RS16060 6fe9b5ae8b15d4c2cdc6407f71c28589 293 Pfam PF13349 Putative adhesin 65 290 2.6E-15 T 25-04-2016 IPR025164 Putative adhesin SMD_RS01405 d1dabd7bef6859fd93128b87264f048a 102 Pfam PF08748 Phage tail assembly chaperone 5 102 3.6E-6 T 25-04-2016 IPR014859 Phage tail assembly chaperone SMD_RS08090 8b96403dffd72dcf81b233a7cdb62b2a 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 8.5E-62 T 25-04-2016 IPR026325 Protein of unknown function DUF932 SMD_RS18660 574ee25f103ba139792473a9582efe0b 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 128 6.3E-13 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS12675 89863019a92cef347d90c96ed60d503c 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 12 100 2.0E-16 T 25-04-2016 IPR008407 Branched-chain amino acid transport, AzlD SMD_RS01410 0f49e5d158366365d595f2cb28c9adeb 85 Pfam PF08809 Phage related hypothetical protein (DUF1799) 4 82 3.3E-27 T 25-04-2016 IPR014915 Bacteriophage TLS, TfmB SMD_RS17015 101abd82c292b7410d64f25bcdc701f2 161 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 1.8E-41 T 25-04-2016 IPR009678 Bacteriophage tail completion protein R SMD_RS14250 62f72d3c9443bfabcdc58303da69aa3e 180 Pfam PF03691 Uncharacterised protein family (UPF0167) 4 179 2.2E-56 T 25-04-2016 IPR005363 Uncharacterised protein family UPF0167 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 PANTHER PTHR35457 292 385 1.9E-65 T 25-04-2016 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 PANTHER PTHR35457 154 262 1.9E-65 T 25-04-2016 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 PANTHER PTHR35457 5 107 1.9E-65 T 25-04-2016 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 PANTHER PTHR35457:SF1 292 385 1.9E-65 T 25-04-2016 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 PANTHER PTHR35457:SF1 154 262 1.9E-65 T 25-04-2016 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 PANTHER PTHR35457:SF1 5 107 1.9E-65 T 25-04-2016 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 Pfam PF02628 Cytochrome oxidase assembly protein 144 377 2.9E-44 T 25-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 SMD_RS02065 d1ec4eaa0ac813c803912fb066227027 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 138 1.7E-21 T 25-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 SMD_RS05695 ba357b6f58977eb020501252bc8e6f79 102 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 7 76 6.5E-10 T 25-04-2016 IPR024476 Protein of unknown function DUF3861 SMD_RS17065 5c76d1f7488e1d54811049cc7640fc49 108 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 18 97 4.0E-16 T 25-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative SMD_RS20700 3e2427332d78ad694f477f589d2fc291 223 Gene3D G3DSA:3.10.180.10 2 117 3.8E-10 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS20700 3e2427332d78ad694f477f589d2fc291 223 SUPERFAMILY SSF54593 1 113 2.17E-11 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMD_RS16755 42898fa23d5591b11c3d20d3cf043386 154 SMART SM00260 6 146 0.0077 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16755 42898fa23d5591b11c3d20d3cf043386 154 Pfam PF01584 CheW-like domain 11 145 8.5E-13 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS16755 42898fa23d5591b11c3d20d3cf043386 154 SUPERFAMILY SSF50341 6 145 7.06E-13 T 25-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMD_RS05600 ce53d2a3d03135d38cbf806ca5d8ee7b 212 Pfam PF16357 Putative PepSY_TM-like 17 212 2.8E-83 T 25-04-2016 IPR032307 Putative PepSY TM-like protein SMD_RS05600 ce53d2a3d03135d38cbf806ca5d8ee7b 212 PANTHER PTHR40115 1 212 1.2E-56 T 25-04-2016 SMD_RS02430 7a92f0793034bc8c6b8622c9198341f7 123 Pfam PF03203 MerC mercury resistance protein 10 119 1.8E-22 T 25-04-2016 IPR004891 MerC mercury resistance protein SMD_RS07940 f0d0f5fe054878cbdcfa2af7c70a6b55 303 Pfam PF11920 Protein of unknown function (DUF3438) 9 283 4.8E-126 T 25-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 SMD_RS07940 f0d0f5fe054878cbdcfa2af7c70a6b55 303 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 274 1.2E-112 T 25-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 SMD_RS06145 474281214d20f3f4e4a70ae64b500a63 123 Pfam PF04241 Protein of unknown function (DUF423) 28 106 5.1E-10 T 25-04-2016 IPR006696 Protein of unknown function DUF423 SMD_RS17325 4e03572adf6febf5b781f1469e0299f2 266 Pfam PF06629 MltA-interacting protein MipA 36 266 9.1E-35 T 25-04-2016 IPR010583 MltA-interacting MipA SMD_RS13130 483dbc08a26eec1b9055c7f4ab3fbdb9 62 Pfam PF04964 Flp/Fap pilin component 8 51 8.9E-12 T 25-04-2016 IPR007047 Flp/Fap pilin component SMD_RS01000 e642fea9dd21ffaf605f00a6b1f580d8 135 Pfam PF05433 Glycine zipper 2TM domain 38 73 1.1E-8 T 25-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SMD_RS07660 66f95d8d0204bd2ff43a305534196484 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 136 8.6E-32 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMD_RS07660 66f95d8d0204bd2ff43a305534196484 140 PANTHER PTHR30558 1 137 2.6E-69 T 25-04-2016 SMD_RS07660 66f95d8d0204bd2ff43a305534196484 140 PANTHER PTHR30558:SF5 1 137 2.6E-69 T 25-04-2016 SMD_RS15195 abc1c106e77d1e2df9e3cb4f20c3d680 187 Pfam PF11218 Protein of unknown function (DUF3011) 44 184 1.4E-35 T 25-04-2016 IPR021381 Protein of unknown function DUF3011 SMD_RS07905 f5e111f6ab23e91d41fddab1f582e3be 316 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 30 314 1.6E-133 T 25-04-2016 IPR026331 Integrating conjugative element protein PFL_4710 SMD_RS07905 f5e111f6ab23e91d41fddab1f582e3be 316 Pfam PF06834 TraU protein 37 304 8.3E-72 T 25-04-2016 IPR009649 TraU SMD_RS01120 a7a47248e7b304eaeab79083f1661d0a 261 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 26 261 4.1E-53 T 25-04-2016 IPR030887 YaiO family, OMP domain SMD_RS07945 6d6bf7c9e8c12039f0e3ac849052462e 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 5.9E-96 T 25-04-2016 IPR021548 Protein of unknown function DUF2895 SMD_RS07945 6d6bf7c9e8c12039f0e3ac849052462e 230 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 1.8E-90 T 25-04-2016 IPR021548 Protein of unknown function DUF2895 SMD_RS17000 3b00c9f2b2fb2d08b8008a1a3b031b18 91 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 88 9.1E-29 T 25-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 SMD_RS06885 204ad5b12ef3c3d2061f6f7873add2b4 271 Pfam PF14257 Domain of unknown function (DUF4349) 28 256 9.2E-29 T 25-04-2016 IPR025645 Domain of unknown function DUF4349 SMD_RS01220 cb263d85449f7f6bd5802cfcd45684ac 97 TIGRFAM TIGR04509 mod_pep_NH_fam: putative modified peptide 5 88 2.2E-28 T 25-04-2016 IPR030976 Putative modified peptide SMD_RS13790 85e65ecb06883ea5fcd0134abb8244a7 259 Pfam PF03524 Conjugal transfer protein 29 255 7.7E-52 T 25-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX SMD_RS20150 081b4ab4a14c72f6a6cd292fc625fc34 141 Pfam PF10825 Protein of unknown function (DUF2752) 45 92 1.3E-18 T 25-04-2016 IPR021215 Protein of unknown function DUF2752 SMD_RS07785 fec7efb1666b70ce715bb54514deee09 90 Pfam PF11666 Protein of unknown function (DUF2933) 25 73 1.0E-23 T 25-04-2016 IPR021682 Protein of unknown function DUF2933 SMD_RS12295 8c03f43d8d504fd1b5a8110b4d7bff0e 124 Pfam PF04214 Protein of unknown function, DUF 25 93 2.7E-32 T 25-04-2016 IPR007332 Protein of unknown function DUF411 SMD_RS04840 115ec897d9afea7aa0fca33140e61ef4 268 Pfam PF06629 MltA-interacting protein MipA 42 268 5.9E-37 T 25-04-2016 IPR010583 MltA-interacting MipA SMD_RS09250 0beff8055b8f169201683bb8ce1f0c7f 97 Pfam PF07769 psiF repeat 63 95 1.2E-18 T 25-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat SMD_RS09250 0beff8055b8f169201683bb8ce1f0c7f 97 Pfam PF07769 psiF repeat 23 53 1.5E-12 T 25-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat SMD_RS01400 ad9f7739d6a9396635cfee1685a3de40 219 Pfam PF08813 Phage tail tube protein, TTP 53 210 2.0E-42 T 25-04-2016 IPR014918 Phage tail tube protein 3 SMD_RS20170 b44c6d11a587fcc6f5e070139c400fc2 154 Pfam PF04519 Polymer-forming cytoskeletal 18 118 5.1E-26 T 25-04-2016 IPR007607 Protein of unknown function DUF583 SMD_RS20170 b44c6d11a587fcc6f5e070139c400fc2 154 PANTHER PTHR35024 12 150 4.9E-30 T 25-04-2016 SMD_RS05880 22e5059a704a95a3ce67eafd91734977 341 Pfam PF01594 Domain of unknown function DUF20 16 333 5.4E-11 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMD_RS06850 b4114856afdd4bd85285bed7b593ffeb 291 Pfam PF01963 TraB family 3 271 5.9E-10 T 25-04-2016 IPR002816 Pheromone shutdown, TraB SMD_RS05570 ec5ebc1a16bc6db23850eb9b1a033700 241 Pfam PF13645 L,D-transpeptidase catalytic domain 46 215 6.0E-61 T 25-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain SMD_RS07885 2a1e6c4ab8a7b1da9902d3c96c92d0e7 121 Pfam PF12553 Protein of unknown function (DUF3742) 1 105 2.2E-42 T 25-04-2016 IPR022213 Protein of unknown function DUF3742 SMD_RS21150 0cc69a2638f654237d6371740287f8ff 285 Gene3D G3DSA:3.40.50.150 62 247 8.8E-13 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS21150 0cc69a2638f654237d6371740287f8ff 285 PIRSF PIRSF031679 11 285 1.8E-104 T 25-04-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted SMD_RS21150 0cc69a2638f654237d6371740287f8ff 285 SUPERFAMILY SSF53335 67 242 4.44E-14 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMD_RS14315 fceba981fbf443a1fe390ae81383525b 183 Pfam PF11159 Protein of unknown function (DUF2939) 12 104 2.3E-28 T 25-04-2016 IPR021330 Protein of unknown function DUF2939 SMD_RS12030 85a27fe7dabd457fcd41382511581846 90 Pfam PF11747 Killing trait 11 78 5.6E-30 T 25-04-2016 IPR021070 Killing trait, RebB SMD_RS12990 78c4859cd32e50951aff69dd6c1657c0 382 PANTHER PTHR19353:SF34 1 357 3.5E-132 T 25-04-2016 SMD_RS12990 78c4859cd32e50951aff69dd6c1657c0 382 PANTHER PTHR19353 1 357 3.5E-132 T 25-04-2016 SMD_RS12990 78c4859cd32e50951aff69dd6c1657c0 382 Pfam PF00487 Fatty acid desaturase 73 340 1.0E-31 T 25-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 SMD_RS08010 693a23f133e4ec188639a2d924fef9d4 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 2.0E-99 T 25-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type SMD_RS08010 693a23f133e4ec188639a2d924fef9d4 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 1.0E-72 T 25-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type SMD_RS06855 a184d23d3539680e6f022fd2d81c2f47 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 87 232 4.7E-10 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMD_RS01900 e5b2528a4b752faea7180b0351a19726 76 SUPERFAMILY SSF47598 2 44 8.67E-5 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SMD_RS21540 6e919883c40148d7e3b95da93a368790 83 Pfam PF04226 Transglycosylase associated protein 33 79 2.6E-11 T 25-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SMD_RS21540 6e919883c40148d7e3b95da93a368790 83 PANTHER PTHR33884 1 83 9.1E-23 T 25-04-2016 SMD_RS13815 695d0756a80d29f985084dc877c42f55 139 SUPERFAMILY SSF109604 3 135 2.48E-12 T 25-04-2016 SMD_RS13815 695d0756a80d29f985084dc877c42f55 139 Pfam PF13328 HD domain 7 58 4.6E-5 T 25-04-2016 IPR003607 HD/PDEase domain SMD_RS01420 2eaffb54297bcab3997609d91c613d86 109 Pfam PF05939 Phage minor tail protein 3 107 6.5E-31 T 25-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail SMD_RS02535 b4d450b96615b76ba49f5e7ed560a0df 549 Pfam PF03783 Curli production assembly/transport component CsgG 235 405 8.5E-11 T 25-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 SMD_RS15285 36be9735752e72d54f27c23f521a6833 173 Pfam PF11218 Protein of unknown function (DUF3011) 35 170 1.1E-36 T 25-04-2016 IPR021381 Protein of unknown function DUF3011 SMD_RS12025 4545ef53074c6f7bc37cb46be5849655 88 Pfam PF11747 Killing trait 11 77 5.1E-27 T 25-04-2016 IPR021070 Killing trait, RebB SMD_RS04685 f5f357aa9b91d9a42d0dfd40da207a8e 513 Pfam PF13289 SIR2-like domain 289 463 5.9E-15 T 25-04-2016 SMD_RS04885 43ece6cebe182defc0012a1cbbe8c289 127 Pfam PF04956 TrbC/VIRB2 family 24 117 6.0E-25 T 25-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 SMD_RS19450 2aae92e4722e277b19726447168acb18 337 Pfam PF11726 Protein of unknown function (DUF3296) 155 326 6.6E-14 T 25-04-2016 IPR021723 Inovirus Gp2 SMD_RS12830 44a36d2fb1a61dfdca367116786d94da 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 56 1.0E-15 T 25-04-2016 IPR012451 Protein of unknown function DUF1656 SMD_RS06165 127d9126f461a11d68c0ab697f8c9d42 59 SUPERFAMILY SSF47598 1 51 4.89E-10 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SMD_RS06165 127d9126f461a11d68c0ab697f8c9d42 59 Gene3D G3DSA:1.10.1220.10 6 48 6.4E-6 T 25-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SMD_RS20825 6795feb97130760769ed493e4faefb42 183 Pfam PF03729 Short repeat of unknown function (DUF308) 78 146 4.8E-13 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane SMD_RS20825 6795feb97130760769ed493e4faefb42 183 Pfam PF03729 Short repeat of unknown function (DUF308) 134 181 2.6E-6 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane SMD_RS20825 6795feb97130760769ed493e4faefb42 183 Pfam PF03729 Short repeat of unknown function (DUF308) 22 88 5.8E-7 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane SMD_RS06915 740b7c13cb4fa7ed338cc142068b875c 329 Pfam PF13796 Putative sensor 142 326 5.9E-46 T 25-04-2016 IPR025828 Putative sensor domain SMD_RS21735 4f5e61a6454602863d94a1f992d9dfe2 181 Pfam PF10947 Protein of unknown function (DUF2628) 63 131 2.1E-9 T 25-04-2016 IPR024399 Protein of unknown function DUF2628 SMD_RS06155 39d1bd24f22be1f8544324b869180069 197 Pfam PF10882 Bacterial PH domain 85 189 5.2E-7 T 25-04-2016 IPR027783 Bacterial Pleckstrin homology domain-related SMD_RS03070 bf4ad542eeb22dfb26729205da20e031 167 Gene3D G3DSA:3.40.50.10220 123 161 6.8E-5 T 25-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMD_RS12895 f2102718704d15ae48bfcf14a846914f 217 Pfam PF11828 Protein of unknown function (DUF3348) 5 179 4.6E-46 T 25-04-2016 IPR021783 Protein of unknown function DUF3348 SMD_RS12895 f2102718704d15ae48bfcf14a846914f 217 Pfam PF11828 Protein of unknown function (DUF3348) 182 215 4.8E-10 T 25-04-2016 IPR021783 Protein of unknown function DUF3348 SMD_RS21030 707c1279b8c50ba03c0a5f44c8fefb27 171 Pfam PF08695 Cytochrome oxidase complex assembly protein 1 34 143 2.3E-8 T 25-04-2016 IPR014807 Cytochrome oxidase assembly protein 1 SMD_RS12225 f2acf197f6fd209e657a5056726893ee 99 SUPERFAMILY SSF158791 10 71 3.79E-5 T 25-04-2016 SMD_RS04460 760b406104b83ed74a4571b6a4c7ad75 485 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 15 168 1.5E-6 T 25-04-2016 IPR018712 Domain of unknown function DUF2235 SMD_RS04460 760b406104b83ed74a4571b6a4c7ad75 485 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 198 275 6.1E-7 T 25-04-2016 IPR018712 Domain of unknown function DUF2235 SMD_RS20725 740976b7a3e30346fc49c613def798b4 229 Pfam PF12787 EcsC protein family 72 216 5.1E-10 T 25-04-2016 IPR024787 EcsC protein SMD_RS11785 1af7a64c8c8194ed17f52da6d887af7e 252 Pfam PF07277 SapC 7 232 7.3E-62 T 25-04-2016 IPR010836 SapC SMD_RS16935 70582dfe8a3a0b940ac2fca1e7b2d579 260 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 127 239 4.7E-28 T 25-04-2016 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain SMD_RS13310 a505d6a252e4a842f7311a02ee4dc126 98 Pfam PF11720 Peptidase inhibitor I78 family 34 97 1.3E-4 T 25-04-2016 IPR021719 Proteinase inhibitor I78 SMD_RS15680 1676adcde053db970b6bcf180dbdf863 721 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 502 575 1.6E-25 T 25-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal SMD_RS21560 2438e557bfa223ec8926606852646624 475 SUPERFAMILY SSF56935 161 475 7.5E-23 T 25-04-2016 SMD_RS21560 2438e557bfa223ec8926606852646624 475 SUPERFAMILY SSF56935 99 127 7.5E-23 T 25-04-2016 SMD_RS14555 ea6176a27c5bfb3f53b0a1f2e5bc47a7 164 Pfam PF05433 Glycine zipper 2TM domain 72 118 9.9E-10 T 25-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SMD_RS01605 06adccf2e8bec870e39bbd93d94f3e72 45 Pfam PF08085 Entericidin EcnA/B family 22 42 8.5E-11 T 25-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 SMD_RS05295 41bd5b1c75b2663865129ff2e7541c05 324 Pfam PF13387 Domain of unknown function (DUF4105) 110 263 9.1E-47 T 25-04-2016 IPR025178 Domain of unknown function DUF4105 SMD_RS07900 38835bd846f58b108be1015fdce2cb87 464 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 48 457 8.2E-177 T 25-04-2016 IPR021204 Integrating conjugative element protein, PFL4711 SMD_RS07990 304cfda90b256d31a4077304fa87f839 166 SUPERFAMILY SSF56019 6 164 1.57E-27 T 25-04-2016 IPR003511 HORMA domain SMD_RS22005 9aaa8f15daa10b055780b38c75090cf6 302 Pfam PF13391 HNH endonuclease 190 241 1.2E-6 T 25-04-2016 IPR003615 HNH nuclease SMD_RS17780 761d5ddfe628acb8eaee1ca05acebb3d 177 PIRSF PIRSF016481 2 177 9.6E-58 T 25-04-2016 IPR007446 Pilus assembly protein PilP SMD_RS17780 761d5ddfe628acb8eaee1ca05acebb3d 177 Pfam PF04351 Pilus assembly protein, PilP 33 174 5.8E-46 T 25-04-2016 IPR007446 Pilus assembly protein PilP SMD_RS03090 0057815115ed345c6491bfa1e0f95810 63 Pfam PF01679 Proteolipid membrane potential modulator 1 47 2.3E-6 T 25-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 SMD_RS16985 d2366abdc93c647c627363ec8d3dc82c 155 Pfam PF05926 Phage head completion protein (GPL) 18 155 9.2E-51 T 25-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 SMD_RS02020 7d8476d5ec0c56ae8f6687ddcd6c88d0 158 Pfam PF10003 Integral membrane protein (DUF2244) 17 147 1.5E-31 T 25-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane SMD_RS12900 131738c3aabb44a45f031e9cb84dcaed 754 Pfam PF05650 Domain of unknown function (DUF802) 321 373 2.9E-10 T 25-04-2016 IPR008520 Domain of unknown function DUF802 SMD_RS07260 1c39057b3273aa1eee3c2651c6a732ab 410 Gene3D G3DSA:2.40.160.10 98 398 2.3E-16 T 25-04-2016 IPR023614 Porin domain SMD_RS07260 1c39057b3273aa1eee3c2651c6a732ab 410 SUPERFAMILY SSF56935 98 402 7.06E-26 T 25-04-2016 SMD_RS20145 b7f3e5e3632ed9b797375a04ddea06e1 92 PANTHER PTHR14948 6 90 1.4E-15 T 25-04-2016 SMD_RS20145 b7f3e5e3632ed9b797375a04ddea06e1 92 Pfam PF04505 Interferon-induced transmembrane protein 9 74 2.2E-23 T 25-04-2016 IPR007593 CD225/Dispanin family GO:0009607|GO:0016021 SMD_RS10425 1e958d83a761347c55845dce28a5caed 589 Pfam PF13387 Domain of unknown function (DUF4105) 216 368 4.1E-27 T 25-04-2016 IPR025178 Domain of unknown function DUF4105 SMD_RS05945 5c08de42d30fc425f55897ec5229c33f 244 Pfam PF09836 Putative DNA-binding domain 8 92 9.3E-19 T 25-04-2016 IPR018640 Putative DNA-binding domain, bacteria SMD_RS08245 57be083dfb201f0bd2b803be66ac31c7 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.2E-25 T 25-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) SMD_RS08595 fb5fe8553191858c543d53c6fd9cd61c 357 SUPERFAMILY SSF53474 286 353 1.08E-9 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08595 fb5fe8553191858c543d53c6fd9cd61c 357 SUPERFAMILY SSF53474 48 154 1.08E-9 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08595 fb5fe8553191858c543d53c6fd9cd61c 357 Gene3D G3DSA:3.40.50.1820 51 155 1.9E-6 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS08595 fb5fe8553191858c543d53c6fd9cd61c 357 Gene3D G3DSA:3.40.50.1820 287 355 1.9E-6 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMD_RS18560 b10cd0bb64abd091b4f97ccb15e3c189 225 SUPERFAMILY SSF160631 60 141 9.03E-8 T 25-04-2016 SMD_RS17270 8e024c25e38f0379ec7dc3b924d883e6 404 Pfam PF00999 Sodium/hydrogen exchanger family 9 367 4.5E-22 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMD_RS05490 5426d90799fdaf0c88a258f16ddb0e35 227 Pfam PF11306 Protein of unknown function (DUF3108) 13 208 1.6E-19 T 25-04-2016 IPR021457 Protein of unknown function DUF3108 SMD_RS13155 3099a8ae9af01197aa191eddb722d6b9 418 Gene3D G3DSA:3.40.50.300 147 390 6.5E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS13155 3099a8ae9af01197aa191eddb722d6b9 418 SUPERFAMILY SSF52540 147 390 1.02E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMD_RS08615 a1247084c32b02d3227453126921ecb6 133 Gene3D G3DSA:1.10.260.40 10 58 3.3E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMD_RS17820 7455fc5466301b8bd0698bae2bdd72c6 235 SUPERFAMILY SSF49354 19 126 3.4E-8 T 25-04-2016 IPR008962 PapD-like SMD_RS13750 2854a8ce14122b8f6137ccc68ae3a2cf 377 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 59 286 4.0E-31 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 SMD_RS21785 3a1e7e1c248225714b7876afbac66739 233 Pfam PF13835 Domain of unknown function (DUF4194) 56 214 8.7E-43 T 25-04-2016 IPR025449 Protein of unknown function DUF4194 SMD_RS16910 17956d10ffd74ef50c87c742730477e1 65 Pfam PF10746 Phage holin T7 family, holin superfamily II 13 61 7.8E-10 T 25-04-2016 IPR019682 Bacteriophage T7, Gp17.5, holin SMD_RS00305 d610ea16eca6105d54cb8edd0092468c 400 Pfam PF16024 Domain of unknown function (DUF4785) 64 366 4.9E-13 T 25-04-2016 IPR031979 Protein of unknown function DUF4785 SMD_RS02965 171ec75ae63a039cbb5ad0173c3c04cd 281 Pfam PF01757 Acyltransferase family 9 272 6.6E-18 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SMD_RS16505 c68e7d2290f41b6e6177f3ea4473f5da 150 Pfam PF07681 DoxX 21 103 2.9E-16 T 25-04-2016 IPR032808 DoxX family SMD_RS13275 fb85b9769e64742b401fcff848f601ec 145 Pfam PF12713 Domain of unknown function (DUF3806) 47 129 7.9E-24 T 25-04-2016 IPR024266 Domain of unknown function DUF3806 SMD_RS01065 bb69bf10d5962bec220a056514bc295b 105 Pfam PF13698 Domain of unknown function (DUF4156) 21 102 1.8E-8 T 25-04-2016 IPR025294 Protein of unknown function DUF4156