locus-tag	class	description
CEQ03_RS00010	COG2902	Dehydrogenase
CEQ03_RS00035	COG2925	Exonuclease
CEQ03_RS00040	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ03_RS00045	COG3844	kynureninase activity
CEQ03_RS00055	COG0288	reversible hydration of carbon dioxide
CEQ03_RS00075	COG0017	Asparaginyl-tRNA synthetase
CEQ03_RS00080	COG0316	Belongs to the HesB IscA family
CEQ03_RS00090	COG0360	Binds together with S18 to 16S ribosomal RNA
CEQ03_RS00095	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CEQ03_RS00100	COG0359	binds to the 23S rRNA
CEQ03_RS00115	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CEQ03_RS00120	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CEQ03_RS00130	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CEQ03_RS00140	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CEQ03_RS00150	COG4993	Dehydrogenase
CEQ03_RS00220	COG0583	DNA-binding transcription factor activity
CEQ03_RS00225	COG2957	Belongs to the agmatine deiminase family
CEQ03_RS00270	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CEQ03_RS00285	COG1228	amidohydrolase
CEQ03_RS00330	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CEQ03_RS00335	COG0077	Prephenate dehydratase
CEQ03_RS00335	COG1605	Chorismate mutase
CEQ03_RS00340	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CEQ03_RS00355	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CEQ03_RS00365	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CEQ03_RS00370	COG0583	DNA-binding transcription factor activity
CEQ03_RS00400	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CEQ03_RS00420	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEQ03_RS00435	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
CEQ03_RS00450	COG0210	DNA helicase
CEQ03_RS00465	COG0604	alcohol dehydrogenase
CEQ03_RS00470	COG1733	regulation of RNA biosynthetic process
CEQ03_RS00490	COG4774	siderophore transport
CEQ03_RS00505	COG4191	Histidine kinase
CEQ03_RS00505	COG0784	Response regulator, receiver
CEQ03_RS00540	COG0789	Transcriptional regulator
CEQ03_RS00545	COG2814	Major facilitator Superfamily
CEQ03_RS00560	COG3505	Type IV secretory pathway VirD4
CEQ03_RS00570	COG3736	Type IV secretory pathway, component VirB8
CEQ03_RS00580	COG2948	multi-organism process
CEQ03_RS00600	COG3702	type iv secretory pathway
CEQ03_RS00675	COG0456	acetyltransferase
CEQ03_RS00680	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ03_RS00685	COG1733	regulation of RNA biosynthetic process
CEQ03_RS00710	COG0668	transmembrane transport
CEQ03_RS00720	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CEQ03_RS00740	COG0534	Mate efflux family protein
CEQ03_RS00745	COG1073	alpha beta
CEQ03_RS00745	COG2226	methyltransferase
CEQ03_RS00760	COG3243	poly(R)-hydroxyalkanoic acid synthase
CEQ03_RS00770	COG1983	PspC domain protein
CEQ03_RS00790	COG2183	response to ionizing radiation
CEQ03_RS00795	COG3447	MASE1 domain protein
CEQ03_RS00795	COG5002	protein histidine kinase activity
CEQ03_RS00795	COG5001	Diguanylate cyclase
CEQ03_RS00885	COG0789	Transcriptional regulator
CEQ03_RS00895	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEQ03_RS00910	COG0531	amino acid
CEQ03_RS00950	COG1595	DNA-templated transcription, initiation
CEQ03_RS00965	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CEQ03_RS00965	COG0519	Catalyzes the synthesis of GMP from XMP
CEQ03_RS00970	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CEQ03_RS00985	COG0587	DNA-directed DNA polymerase activity
CEQ03_RS01045	COG2814	Major facilitator Superfamily
CEQ03_RS01075	COG1285	pathogenesis
CEQ03_RS01085	COG2186	Transcriptional regulator
CEQ03_RS01090	COG1304	FMN binding
CEQ03_RS01095	COG0277	FAD linked oxidase domain protein
CEQ03_RS01135	COG3161	chorismate lyase activity
CEQ03_RS01150	COG0583	DNA-binding transcription factor activity
CEQ03_RS01160	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CEQ03_RS01170	COG2814	Major facilitator Superfamily
CEQ03_RS01175	COG2197	response regulator
CEQ03_RS01180	COG3850	Histidine kinase
CEQ03_RS01195	COG1335	isochorismatase
CEQ03_RS01205	COG1228	amidohydrolase
CEQ03_RS01215	COG2814	Major facilitator Superfamily
CEQ03_RS01270	COG4964	Belongs to the GSP D family
CEQ03_RS01315	COG2226	methyltransferase
CEQ03_RS01335	COG4772	TonB-dependent receptor
CEQ03_RS01390	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CEQ03_RS01395	COG4206	TonB-dependent receptor
CEQ03_RS01405	COG3321	synthase
CEQ03_RS01405	COG0604	alcohol dehydrogenase
CEQ03_RS01405	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS01410	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CEQ03_RS01415	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CEQ03_RS01430	COG1914	H( )-stimulated, divalent metal cation uptake system
CEQ03_RS01505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEQ03_RS01510	COG2409	Drug exporters of the RND superfamily
CEQ03_RS01520	COG1169	isochorismate synthase
CEQ03_RS01525	COG1021	2,3-dihydroxybenzoate-AMP ligase
CEQ03_RS01530	COG1535	isochorismatase
CEQ03_RS01530	COG3433	isochorismatase activity
CEQ03_RS01535	COG1535	isochorismatase
CEQ03_RS01535	COG3433	isochorismatase activity
CEQ03_RS01540	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CEQ03_RS01540	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEQ03_RS01545	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS01565	COG2885	chlorophyll binding
CEQ03_RS01585	COG2194	sulfuric ester hydrolase activity
CEQ03_RS01595	COG2205	protein histidine kinase activity
CEQ03_RS01635	COG2207	Transcriptional regulator
CEQ03_RS01685	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CEQ03_RS01690	COG0315	cyclic pyranopterin monophosphate synthase activity
CEQ03_RS01690	COG0521	Mo-molybdopterin cofactor biosynthetic process
CEQ03_RS01695	COG0303	'Molybdopterin
CEQ03_RS01705	COG0314	molybdopterin synthase activity
CEQ03_RS01710	COG0746	molybdenum cofactor guanylyltransferase activity
CEQ03_RS01720	COG2223	nitrite transmembrane transporter activity
CEQ03_RS01725	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CEQ03_RS01730	COG1140	nitrate reductase beta subunit
CEQ03_RS01735	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CEQ03_RS01740	COG2181	nitrate reductase activity
CEQ03_RS01745	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEQ03_RS01760	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEQ03_RS01765	COG0725	ABC transporter, periplasmic molybdate-binding protein
CEQ03_RS01770	COG4149	molybdate abc transporter
CEQ03_RS01775	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CEQ03_RS01780	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CEQ03_RS01785	COG0840	transmembrane signaling receptor activity
CEQ03_RS01795	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CEQ03_RS01800	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CEQ03_RS01900	COG2801	Transposase and inactivated derivatives
CEQ03_RS01900	COG3415	Transposase
CEQ03_RS01945	COG0811	peptide transport
CEQ03_RS01975	COG1335	isochorismatase
CEQ03_RS01980	COG1335	isochorismatase
CEQ03_RS02025	COG3920	Histidine kinase
CEQ03_RS02025	COG2202	Pas domain
CEQ03_RS02045	COG0477	Major facilitator Superfamily
CEQ03_RS02060	COG3537	Alpha-1,2-mannosidase
CEQ03_RS02065	COG0642	Histidine kinase
CEQ03_RS02090	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS02095	COG0583	DNA-binding transcription factor activity
CEQ03_RS02100	COG5002	protein histidine kinase activity
CEQ03_RS02115	COG2372	response to copper ion
CEQ03_RS02135	COG0656	L-ascorbic acid biosynthetic process
CEQ03_RS02140	COG0583	DNA-binding transcription factor activity
CEQ03_RS02155	COG1136	(ABC) transporter
CEQ03_RS02180	COG0477	Major facilitator Superfamily
CEQ03_RS02205	COG0243	molybdopterin cofactor binding
CEQ03_RS02260	COG4566	intracellular signal transduction
CEQ03_RS02265	COG4191	Histidine kinase
CEQ03_RS02270	COG1285	pathogenesis
CEQ03_RS02275	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CEQ03_RS02305	COG5002	protein histidine kinase activity
CEQ03_RS02320	COG4774	siderophore transport
CEQ03_RS02330	COG3214	Protein conserved in bacteria
CEQ03_RS02340	COG2205	protein histidine kinase activity
CEQ03_RS02345	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS02355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS02360	COG0577	efflux transmembrane transporter activity
CEQ03_RS02360	COG1136	(ABC) transporter
CEQ03_RS02370	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS02380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEQ03_RS02385	COG0366	Alpha amylase catalytic
CEQ03_RS02390	COG0708	Exodeoxyribonuclease III
CEQ03_RS02465	COG2204	response regulator
CEQ03_RS02490	COG0583	DNA-binding transcription factor activity
CEQ03_RS02510	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEQ03_RS02540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ03_RS02550	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS02555	COG2271	Major facilitator Superfamily
CEQ03_RS02575	COG2186	Transcriptional regulator
CEQ03_RS02590	COG0318	PFAM AMP-dependent synthetase and ligase
CEQ03_RS02600	COG0642	Histidine kinase
CEQ03_RS02625	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CEQ03_RS02655	COG0583	DNA-binding transcription factor activity
CEQ03_RS02660	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CEQ03_RS02685	COG0583	DNA-binding transcription factor activity
CEQ03_RS02690	COG2828	Protein conserved in bacteria
CEQ03_RS02705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEQ03_RS02720	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CEQ03_RS02745	COG1063	alcohol dehydrogenase
CEQ03_RS02765	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CEQ03_RS02790	COG3685	Protein conserved in bacteria
CEQ03_RS02795	COG3546	catalase activity
CEQ03_RS02830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS02845	COG0318	PFAM AMP-dependent synthetase and ligase
CEQ03_RS02860	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS02865	COG2086	electron transfer activity
CEQ03_RS02880	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS02890	COG1024	Enoyl-CoA hydratase
CEQ03_RS03025	COG2205	protein histidine kinase activity
CEQ03_RS03030	COG0454	-acetyltransferase
CEQ03_RS03030	COG0456	acetyltransferase
CEQ03_RS03040	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
CEQ03_RS03050	COG4251	negative regulation of phosphorylation
CEQ03_RS03055	COG0784	Response regulator, receiver
CEQ03_RS03075	COG1595	DNA-templated transcription, initiation
CEQ03_RS03090	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
CEQ03_RS03100	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEQ03_RS03145	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CEQ03_RS03155	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CEQ03_RS03160	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEQ03_RS03165	COG4558	Periplasmic binding protein
CEQ03_RS03175	COG2819	hydrolase of the alpha beta superfamily
CEQ03_RS03190	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CEQ03_RS03205	COG1674	ftsk spoiiie
CEQ03_RS03210	COG0492	ferredoxin-NADP+ reductase activity
CEQ03_RS03255	COG0542	response to heat
CEQ03_RS03270	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CEQ03_RS03285	COG0482	sulfurtransferase activity
CEQ03_RS03290	COG2915	High frequency lysogenization protein hflD homolog
CEQ03_RS03335	COG5002	protein histidine kinase activity
CEQ03_RS03355	COG0835	chemotaxis
CEQ03_RS03355	COG0784	Response regulator, receiver
CEQ03_RS03360	COG1815	bacterial-type flagellum-dependent cell motility
CEQ03_RS03380	COG4787	bacterial-type flagellum-dependent cell motility
CEQ03_RS03390	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CEQ03_RS03405	COG1256	bacterial-type flagellum assembly
CEQ03_RS03425	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CEQ03_RS03445	COG2197	response regulator
CEQ03_RS03475	COG1677	Flagellar hook-basal body complex protein FliE
CEQ03_RS03525	COG3190	flagellar
CEQ03_RS03535	COG1987	bacterial-type flagellum assembly
CEQ03_RS03555	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CEQ03_RS03560	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CEQ03_RS03585	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CEQ03_RS03590	COG2198	Histidine kinase
CEQ03_RS03590	COG0784	Response regulator, receiver
CEQ03_RS03590	COG0643	Histidine kinase
CEQ03_RS03595	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CEQ03_RS03600	COG1360	Flagellar Motor Protein
CEQ03_RS03610	COG0835	chemotaxis
CEQ03_RS03620	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS03630	COG0840	transmembrane signaling receptor activity
CEQ03_RS03635	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CEQ03_RS03640	COG0835	chemotaxis
CEQ03_RS03650	COG0840	transmembrane signaling receptor activity
CEQ03_RS03655	COG0840	transmembrane signaling receptor activity
CEQ03_RS03665	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CEQ03_RS03710	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CEQ03_RS03715	COG1309	transcriptional regulator
CEQ03_RS03720	COG1012	belongs to the aldehyde dehydrogenase family
CEQ03_RS03725	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CEQ03_RS03730	COG0318	PFAM AMP-dependent synthetase and ligase
CEQ03_RS03735	COG1024	Enoyl-CoA hydratase
CEQ03_RS03740	COG2198	Histidine kinase
CEQ03_RS03740	COG2205	protein histidine kinase activity
CEQ03_RS03740	COG0784	Response regulator, receiver
CEQ03_RS03760	COG1012	belongs to the aldehyde dehydrogenase family
CEQ03_RS03775	COG3279	Response regulator of the LytR AlgR family
CEQ03_RS03790	COG4676	Protein conserved in bacteria
CEQ03_RS03795	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CEQ03_RS03810	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEQ03_RS03815	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CEQ03_RS03820	COG0505	Belongs to the CarA family
CEQ03_RS03825	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CEQ03_RS03840	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ03_RS03885	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CEQ03_RS03900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS03905	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS03910	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS03915	COG2205	protein histidine kinase activity
CEQ03_RS03930	COG0277	FAD linked oxidase domain protein
CEQ03_RS03935	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEQ03_RS03945	COG0531	amino acid
CEQ03_RS03950	COG0531	amino acid
CEQ03_RS03960	COG0235	Class ii aldolase
CEQ03_RS03965	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CEQ03_RS03970	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
CEQ03_RS03985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ03_RS03995	COG1609	Transcriptional regulator
CEQ03_RS04000	COG3537	Alpha-1,2-mannosidase
CEQ03_RS04020	COG0789	Transcriptional regulator
CEQ03_RS04035	COG3142	Participates in the control of copper homeostasis
CEQ03_RS04040	COG1446	asparaginase
CEQ03_RS04060	COG0140	phosphoribosyl-ATP diphosphatase activity
CEQ03_RS04060	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CEQ03_RS04065	COG0107	imidazoleglycerol-phosphate synthase activity
CEQ03_RS04070	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CEQ03_RS04075	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CEQ03_RS04080	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CEQ03_RS04080	COG0131	Imidazoleglycerol-phosphate dehydratase
CEQ03_RS04085	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CEQ03_RS04090	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CEQ03_RS04095	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CEQ03_RS04105	COG0124	histidyl-tRNA synthetase
CEQ03_RS04110	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEQ03_RS04120	COG0083	homoserine kinase activity
CEQ03_RS04125	COG0460	homoserine dehydrogenase
CEQ03_RS04125	COG0527	aspartate kinase activity
CEQ03_RS04160	COG0640	Transcriptional regulator
CEQ03_RS04170	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS04180	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CEQ03_RS04185	COG2205	protein histidine kinase activity
CEQ03_RS04185	COG3437	response regulator, receiver
CEQ03_RS04185	COG4999	Histidine kinase
CEQ03_RS04185	COG3850	Histidine kinase
CEQ03_RS04190	COG4191	Histidine kinase
CEQ03_RS04190	COG0784	Response regulator, receiver
CEQ03_RS04235	COG1012	belongs to the aldehyde dehydrogenase family
CEQ03_RS04240	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS04255	COG0167	dihydroorotate dehydrogenase activity
CEQ03_RS04260	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CEQ03_RS04265	COG0697	spore germination
CEQ03_RS04280	COG1309	transcriptional regulator
CEQ03_RS04310	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS04315	COG0477	Major facilitator Superfamily
CEQ03_RS04320	COG0583	DNA-binding transcription factor activity
CEQ03_RS04325	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CEQ03_RS04355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEQ03_RS04360	COG1126	abc transporter atp-binding protein
CEQ03_RS04370	COG1473	amidohydrolase
CEQ03_RS04375	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEQ03_RS04380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEQ03_RS04390	COG0431	NADPH-dependent FMN reductase
CEQ03_RS04395	COG4206	TonB-dependent receptor
CEQ03_RS04425	COG4716	Myosin-crossreactive antigen
CEQ03_RS04440	COG0640	Transcriptional regulator
CEQ03_RS04465	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS04495	COG0583	DNA-binding transcription factor activity
CEQ03_RS04530	COG0519	Catalyzes the synthesis of GMP from XMP
CEQ03_RS04530	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CEQ03_RS04545	COG0475	glutathione-regulated potassium exporter activity
CEQ03_RS04545	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CEQ03_RS04550	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CEQ03_RS04575	COG1160	GTP binding
CEQ03_RS04580	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ03_RS04590	COG1426	Protein conserved in bacteria
CEQ03_RS04590	COG1426	Protein conserved in bacteria
CEQ03_RS04595	COG0457	Tetratricopeptide repeat
CEQ03_RS04595	COG0859	PFAM glycosyl transferase family 9
CEQ03_RS04600	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CEQ03_RS04605	COG0105	UTP biosynthetic process
CEQ03_RS04615	COG1024	Enoyl-CoA hydratase
CEQ03_RS04615	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEQ03_RS04620	COG0183	Belongs to the thiolase family
CEQ03_RS04625	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CEQ03_RS04635	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CEQ03_RS04640	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CEQ03_RS04650	COG0776	regulation of translation
CEQ03_RS04660	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CEQ03_RS04665	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CEQ03_RS04675	COG2957	Belongs to the agmatine deiminase family
CEQ03_RS04680	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CEQ03_RS04695	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS04720	COG0488	(ABC) transporter
CEQ03_RS04725	COG0583	DNA-binding transcription factor activity
CEQ03_RS04735	COG0513	Belongs to the DEAD box helicase family
CEQ03_RS04740	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CEQ03_RS04755	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CEQ03_RS04760	COG0625	glutathione transferase activity
CEQ03_RS04780	COG4681	YaeQ
CEQ03_RS04785	COG2081	HI0933 family
CEQ03_RS04795	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CEQ03_RS04805	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CEQ03_RS04815	COG1862	Preprotein translocase
CEQ03_RS04820	COG0343	queuine tRNA-ribosyltransferase activity
CEQ03_RS04825	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CEQ03_RS04830	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CEQ03_RS04860	COG1132	(ABC) transporter
CEQ03_RS04870	COG1605	Chorismate mutase
CEQ03_RS04870	COG0287	Prephenate dehydrogenase
CEQ03_RS04875	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CEQ03_RS04880	COG2223	nitrite transmembrane transporter activity
CEQ03_RS04885	COG2207	Transcriptional regulator
CEQ03_RS04890	COG0484	heat shock protein binding
CEQ03_RS04895	COG0443	Heat shock 70 kDa protein
CEQ03_RS04900	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CEQ03_RS04905	COG1420	regulation of RNA biosynthetic process
CEQ03_RS04910	COG0497	DNA recombination
CEQ03_RS04915	COG0583	DNA-binding transcription factor activity
CEQ03_RS05150	COG2974	May be involved in recombination
CEQ03_RS05165	COG0735	belongs to the Fur family
CEQ03_RS05170	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ03_RS05175	COG2914	Belongs to the UPF0125 (RnfH) family
CEQ03_RS05185	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CEQ03_RS05510	COG2974	May be involved in recombination
CEQ03_RS05595	COG0582	viral genome integration into host DNA
CEQ03_RS05605	COG2204	response regulator
CEQ03_RS05760	COG0583	DNA-binding transcription factor activity
CEQ03_RS05765	COG2885	chlorophyll binding
CEQ03_RS05770	COG0415	Belongs to the DNA photolyase family
CEQ03_RS05780	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CEQ03_RS05800	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CEQ03_RS05820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEQ03_RS05825	COG0405	Gamma-glutamyltransferase
CEQ03_RS05830	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEQ03_RS05840	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CEQ03_RS05845	COG0742	ribosomal rna small subunit methyltransferase
CEQ03_RS05865	COG0552	protein localization to endoplasmic reticulum
CEQ03_RS05875	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CEQ03_RS05890	COG4591	ABC-type transport system involved in lipoprotein release permease component
CEQ03_RS05910	COG1053	succinate dehydrogenase
CEQ03_RS05915	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CEQ03_RS05920	COG2009	succinate dehydrogenase
CEQ03_RS05945	COG0837	glucose binding
CEQ03_RS05955	COG0129	dihydroxy-acid dehydratase activity
CEQ03_RS05960	COG0800	Aldolase
CEQ03_RS05970	COG0671	phosphoesterase, PA-phosphatase related
CEQ03_RS05975	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CEQ03_RS05985	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CEQ03_RS05990	COG0166	Belongs to the GPI family
CEQ03_RS05995	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CEQ03_RS06005	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CEQ03_RS06010	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CEQ03_RS06015	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CEQ03_RS06020	COG0617	tRNA 3'-terminal CCA addition
CEQ03_RS06030	COG0477	Major facilitator Superfamily
CEQ03_RS06035	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CEQ03_RS06045	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEQ03_RS06055	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CEQ03_RS06060	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CEQ03_RS06075	COG0352	thiamine-phosphate diphosphorylase activity
CEQ03_RS06075	COG0351	phosphomethylpyrimidine kinase
CEQ03_RS06100	COG0583	DNA-binding transcription factor activity
CEQ03_RS06105	COG1741	Belongs to the pirin family
CEQ03_RS06120	COG2223	nitrite transmembrane transporter activity
CEQ03_RS06135	COG3258	Cytochrome c
CEQ03_RS06150	COG3540	Alkaline phosphatase
CEQ03_RS06200	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CEQ03_RS06205	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CEQ03_RS06210	COG2137	regulation of response to DNA damage stimulus
CEQ03_RS06215	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CEQ03_RS06220	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CEQ03_RS06225	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CEQ03_RS06230	COG1546	Belongs to the CinA family
CEQ03_RS06235	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CEQ03_RS06240	COG1923	regulation of RNA biosynthetic process
CEQ03_RS06245	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CEQ03_RS06250	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CEQ03_RS06270	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CEQ03_RS06275	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CEQ03_RS06280	COG1534	Rna-binding protein
CEQ03_RS06305	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CEQ03_RS06310	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CEQ03_RS06315	COG2840	Smr protein MutS2
CEQ03_RS06325	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CEQ03_RS06330	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CEQ03_RS06335	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CEQ03_RS06340	COG0148	phosphopyruvate hydratase activity
CEQ03_RS06355	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CEQ03_RS06360	COG0504	CTP synthase activity
CEQ03_RS06375	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEQ03_RS06395	COG1253	flavin adenine dinucleotide binding
CEQ03_RS06410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEQ03_RS06415	COG1054	Belongs to the UPF0176 family
CEQ03_RS06440	COG0069	glutamate synthase activity
CEQ03_RS06445	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CEQ03_RS06460	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CEQ03_RS06495	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CEQ03_RS06500	COG1917	Cupin 2, conserved barrel domain protein
CEQ03_RS06500	COG4977	sequence-specific DNA binding
CEQ03_RS06520	COG0583	DNA-binding transcription factor activity
CEQ03_RS06555	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CEQ03_RS06660	COG1136	(ABC) transporter
CEQ03_RS06660	COG0577	efflux transmembrane transporter activity
CEQ03_RS06695	COG0322	excinuclease ABC activity
CEQ03_RS06705	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CEQ03_RS06710	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CEQ03_RS06715	COG1663	tetraacyldisaccharide 4'-kinase activity
CEQ03_RS06730	COG0811	peptide transport
CEQ03_RS06750	COG3713	MltA-interacting MipA family protein
CEQ03_RS06785	COG0556	nucleotide-excision repair
CEQ03_RS06830	COG1611	Belongs to the LOG family
CEQ03_RS06845	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CEQ03_RS06855	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEQ03_RS06890	COG2969	positive regulation of protein catabolic process
CEQ03_RS06895	COG0625	glutathione transferase activity
CEQ03_RS06900	COG2857	Cytochrome c1
CEQ03_RS06905	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CEQ03_RS06910	COG0723	plastoquinol--plastocyanin reductase activity
CEQ03_RS06915	COG0741	lytic transglycosylase activity
CEQ03_RS06930	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CEQ03_RS06935	COG0842	Transport permease protein
CEQ03_RS06940	COG1131	(ABC) transporter
CEQ03_RS06945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS06950	COG1702	phosphate starvation-inducible protein PhoH
CEQ03_RS06955	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CEQ03_RS06975	COG4535	Mg2 and Co2 transporter CorC
CEQ03_RS06990	COG1012	belongs to the aldehyde dehydrogenase family
CEQ03_RS06995	COG1177	transmembrane transport
CEQ03_RS07000	COG1176	ABC-type spermidine putrescine transport system, permease component I
CEQ03_RS07005	COG3842	ATPase activity
CEQ03_RS07010	COG2072	flavoprotein involved in K transport
CEQ03_RS07020	COG0174	glutamine synthetase
CEQ03_RS07025	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CEQ03_RS07030	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEQ03_RS07050	COG2703	oxygen carrier activity
CEQ03_RS07055	COG0477	Major facilitator Superfamily
CEQ03_RS07065	COG1012	belongs to the aldehyde dehydrogenase family
CEQ03_RS07070	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CEQ03_RS07080	COG2733	membrane
CEQ03_RS07100	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CEQ03_RS07100	COG0116	Belongs to the methyltransferase superfamily
CEQ03_RS07120	COG0494	nUDIX hydrolase
CEQ03_RS07130	COG1024	Enoyl-CoA hydratase
CEQ03_RS07140	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CEQ03_RS07150	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CEQ03_RS07155	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CEQ03_RS07160	COG0573	inorganic phosphate transmembrane transporter activity
CEQ03_RS07165	COG0581	inorganic phosphate transmembrane transporter activity
CEQ03_RS07175	COG0704	Plays a role in the regulation of phosphate uptake
CEQ03_RS07185	COG3220	belongs to the UPF0276 family
CEQ03_RS07195	COG2259	Doxx family
CEQ03_RS07200	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEQ03_RS07220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS07225	COG1136	(ABC) transporter
CEQ03_RS07225	COG0577	efflux transmembrane transporter activity
CEQ03_RS07230	COG1538	Outer membrane efflux protein
CEQ03_RS07235	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CEQ03_RS07245	COG0557	exoribonuclease II activity
CEQ03_RS07275	COG0583	DNA-binding transcription factor activity
CEQ03_RS07290	COG2814	Major facilitator Superfamily
CEQ03_RS07295	COG1566	PFAM secretion protein HlyD family protein
CEQ03_RS07330	COG0475	glutathione-regulated potassium exporter activity
CEQ03_RS07335	COG0367	asparagine synthase
CEQ03_RS07340	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CEQ03_RS07345	COG1393	Belongs to the ArsC family
CEQ03_RS07360	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CEQ03_RS07380	COG3188	usher protein
CEQ03_RS07400	COG0052	Belongs to the universal ribosomal protein uS2 family
CEQ03_RS07405	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CEQ03_RS07415	COG0528	UMP kinase activity
CEQ03_RS07420	COG0233	cytoplasmic translational termination
CEQ03_RS07425	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CEQ03_RS07430	COG0575	Belongs to the CDS family
CEQ03_RS07435	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CEQ03_RS07440	COG0750	zinc metalloprotease
CEQ03_RS07445	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ03_RS07450	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ03_RS07460	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ03_RS07465	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ03_RS07485	COG0825	malonyl-CoA metabolic process
CEQ03_RS07490	COG1981	membrane
CEQ03_RS07510	COG1695	Transcriptional regulator
CEQ03_RS07560	COG1132	(ABC) transporter
CEQ03_RS07585	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEQ03_RS07595	COG1187	pseudouridine synthase activity
CEQ03_RS07650	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CEQ03_RS07690	COG0735	belongs to the Fur family
CEQ03_RS07695	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CEQ03_RS07710	COG4452	Inner membrane protein CreD
CEQ03_RS07715	COG2205	protein histidine kinase activity
CEQ03_RS07720	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS07725	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CEQ03_RS07735	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CEQ03_RS07745	COG2801	Transposase and inactivated derivatives
CEQ03_RS07745	COG3415	Transposase
CEQ03_RS07750	COG3590	peptidase
CEQ03_RS07755	COG0588	phosphoglycerate mutase activity
CEQ03_RS07785	COG3706	GGDEF domain
CEQ03_RS07790	COG2814	Major facilitator Superfamily
CEQ03_RS07815	COG1647	Serine aminopeptidase, S33
CEQ03_RS07825	COG2076	Multidrug Resistance protein
CEQ03_RS07840	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CEQ03_RS07865	COG0024	Methionine aminopeptidase
CEQ03_RS07885	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS07905	COG0840	transmembrane signaling receptor activity
CEQ03_RS08150	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CEQ03_RS08160	COG0753	catalase activity
CEQ03_RS08180	COG0534	Mate efflux family protein
CEQ03_RS08200	COG0335	large ribosomal subunit rRNA binding
CEQ03_RS08205	COG0336	Belongs to the RNA methyltransferase TrmD family
CEQ03_RS08210	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CEQ03_RS08215	COG0228	four-way junction DNA binding
CEQ03_RS08230	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CEQ03_RS08250	COG0326	Molecular chaperone. Has ATPase activity
CEQ03_RS08265	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CEQ03_RS08270	COG1845	cytochrome c oxidase, subunit III
CEQ03_RS08275	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CEQ03_RS08320	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEQ03_RS08340	COG4206	TonB-dependent receptor
CEQ03_RS08365	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CEQ03_RS08375	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CEQ03_RS08380	COG0196	riboflavin kinase activity
CEQ03_RS08385	COG0728	peptidoglycan biosynthetic process
CEQ03_RS08390	COG0268	Binds directly to 16S ribosomal RNA
CEQ03_RS08395	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CEQ03_RS08400	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CEQ03_RS08405	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CEQ03_RS08410	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CEQ03_RS08415	COG0824	Thioesterase
CEQ03_RS08435	COG1946	Acyl-CoA thioesterase
CEQ03_RS08445	COG1595	DNA-templated transcription, initiation
CEQ03_RS08455	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CEQ03_RS08465	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CEQ03_RS08510	COG2197	response regulator
CEQ03_RS08515	COG4585	Histidine kinase
CEQ03_RS08530	COG2894	cell division
CEQ03_RS08535	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CEQ03_RS08550	COG1506	peptidase
CEQ03_RS08550	COG0823	Involved in the tonB-independent uptake of proteins
CEQ03_RS08555	COG1297	OPT oligopeptide transporter protein
CEQ03_RS08570	COG3104	oligopeptide transport
CEQ03_RS08595	COG0579	oxidoreductase
CEQ03_RS08610	COG3052	prosthetic group binding
CEQ03_RS08645	COG1802	Transcriptional regulator
CEQ03_RS08690	COG2259	Doxx family
CEQ03_RS08710	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CEQ03_RS08715	COG1408	metallophosphoesterase
CEQ03_RS08720	COG1253	flavin adenine dinucleotide binding
CEQ03_RS08725	COG3655	Transcriptional regulator
CEQ03_RS08740	COG0640	Transcriptional regulator
CEQ03_RS08780	COG1609	Transcriptional regulator
CEQ03_RS08790	COG2211	Major facilitator Superfamily
CEQ03_RS08795	COG0673	inositol 2-dehydrogenase activity
CEQ03_RS08830	COG0629	single-stranded DNA binding
CEQ03_RS08840	COG1131	(ABC) transporter
CEQ03_RS08875	COG2211	Major facilitator Superfamily
CEQ03_RS08875	COG2190	(PTS) system
CEQ03_RS08885	COG1082	Xylose isomerase domain protein TIM barrel
CEQ03_RS08895	COG0366	Alpha amylase catalytic
CEQ03_RS08900	COG0142	geranyltranstransferase activity
CEQ03_RS08925	COG0527	aspartate kinase activity
CEQ03_RS08930	COG0384	phenazine biosynthesis protein PhzF
CEQ03_RS08935	COG0384	phenazine biosynthesis protein PhzF
CEQ03_RS08940	COG1764	response to oxidative stress
CEQ03_RS08965	COG0693	protein deglycase activity
CEQ03_RS08975	COG1959	2 iron, 2 sulfur cluster binding
CEQ03_RS08980	COG0719	Fe-S assembly protein
CEQ03_RS08990	COG0396	ATPase activity
CEQ03_RS08995	COG0719	Fe-S assembly protein
CEQ03_RS09000	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CEQ03_RS09015	COG2146	nitrite reductase [NAD(P)H] activity
CEQ03_RS09025	COG4774	siderophore transport
CEQ03_RS09035	COG3128	pkhd-type hydroxylase
CEQ03_RS09040	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEQ03_RS09050	COG4771	TonB-dependent receptor
CEQ03_RS09070	COG1477	protein flavinylation
CEQ03_RS09075	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CEQ03_RS09095	COG1555	photosystem II stabilization
CEQ03_RS09105	COG2261	transglycosylase associated protein
CEQ03_RS09115	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CEQ03_RS09125	COG0628	permease
CEQ03_RS09135	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CEQ03_RS09155	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CEQ03_RS09175	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CEQ03_RS09190	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CEQ03_RS09205	COG1137	ATPase activity
CEQ03_RS09215	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CEQ03_RS09220	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEQ03_RS09225	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CEQ03_RS09230	COG1660	Displays ATPase and GTPase activities
CEQ03_RS09245	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEQ03_RS09250	COG2239	Acts as a magnesium transporter
CEQ03_RS09270	COG0540	Belongs to the ATCase OTCase family
CEQ03_RS09275	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CEQ03_RS09280	COG1678	Uncharacterized ACR, COG1678
CEQ03_RS09285	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CEQ03_RS09290	COG0519	Catalyzes the synthesis of GMP from XMP
CEQ03_RS09315	COG0667	Aldo Keto reductase
CEQ03_RS09330	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CEQ03_RS09340	COG0583	DNA-binding transcription factor activity
CEQ03_RS09375	COG0477	Major facilitator Superfamily
CEQ03_RS09385	COG0697	spore germination
CEQ03_RS09390	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ03_RS09395	COG0583	DNA-binding transcription factor activity
CEQ03_RS09405	COG2226	methyltransferase
CEQ03_RS09420	COG2223	nitrite transmembrane transporter activity
CEQ03_RS09435	COG4774	siderophore transport
CEQ03_RS09575	COG0582	viral genome integration into host DNA
CEQ03_RS09640	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CEQ03_RS09645	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CEQ03_RS09650	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CEQ03_RS09655	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEQ03_RS09665	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS09670	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CEQ03_RS09680	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CEQ03_RS09685	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CEQ03_RS09690	COG1399	metal-binding, possibly nucleic acid-binding protein
CEQ03_RS09705	COG0714	Associated with various cellular activities
CEQ03_RS09725	COG0537	adenosine 5'-monophosphoramidase activity
CEQ03_RS09735	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CEQ03_RS09765	COG2076	Multidrug Resistance protein
CEQ03_RS09780	COG1234	tRNA 3'-trailer cleavage
CEQ03_RS09785	COG3642	lipopolysaccharide core region biosynthetic process
CEQ03_RS09790	COG0859	PFAM glycosyl transferase family 9
CEQ03_RS09805	COG0582	viral genome integration into host DNA
CEQ03_RS09845	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CEQ03_RS09850	COG2194	sulfuric ester hydrolase activity
CEQ03_RS09870	COG1063	alcohol dehydrogenase
CEQ03_RS09885	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CEQ03_RS09900	COG4983	Phage plasmid primase, P4 family domain protein
CEQ03_RS09920	COG5377	YqaJ viral recombinase family
CEQ03_RS09990	COG0631	protein serine/threonine phosphatase activity
CEQ03_RS09995	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEQ03_RS10000	COG0328	RNA-DNA hybrid ribonuclease activity
CEQ03_RS10010	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEQ03_RS10015	COG3942	CHAP domain
CEQ03_RS10015	COG1388	LysM domain
CEQ03_RS10020	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEQ03_RS10060	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CEQ03_RS10065	COG0740	serine-type endopeptidase activity
CEQ03_RS10070	COG0544	peptidyl-prolyl cis-trans isomerase activity
CEQ03_RS10135	COG0473	3-isopropylmalate dehydrogenase activity
CEQ03_RS10150	COG4783	chaperone-mediated protein folding
CEQ03_RS10165	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CEQ03_RS10170	COG0248	Ppx GppA phosphatase
CEQ03_RS10180	COG0438	transferase activity, transferring glycosyl groups
CEQ03_RS10190	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEQ03_RS10195	COG3291	Pkd domain containing protein
CEQ03_RS10205	COG2833	Protein of unknown function (DUF455)
CEQ03_RS10225	COG0285	dihydrofolate synthase activity
CEQ03_RS10230	COG0406	alpha-ribazole phosphatase activity
CEQ03_RS10245	COG1063	alcohol dehydrogenase
CEQ03_RS10265	COG1187	pseudouridine synthase activity
CEQ03_RS10275	COG3344	reverse transcriptase
CEQ03_RS10285	COG0604	alcohol dehydrogenase
CEQ03_RS10290	COG2364	Membrane
CEQ03_RS10295	COG0446	pyridine nucleotide-disulphide oxidoreductase
CEQ03_RS10295	COG1902	pentaerythritol trinitrate reductase activity
CEQ03_RS10305	COG0625	glutathione transferase activity
CEQ03_RS10320	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CEQ03_RS10325	COG0564	pseudouridine synthase activity
CEQ03_RS10330	COG0039	L-malate dehydrogenase activity
CEQ03_RS10335	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CEQ03_RS10350	COG0154	amidase activity
CEQ03_RS10360	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CEQ03_RS10375	COG0203	ribosomal protein L17
CEQ03_RS10380	COG0202	RNA polymerase activity
CEQ03_RS10385	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CEQ03_RS10390	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CEQ03_RS10395	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CEQ03_RS10400	COG0201	protein transport
CEQ03_RS10405	COG0200	Binds to the 23S rRNA
CEQ03_RS10410	COG1841	ribosomal large subunit assembly
CEQ03_RS10415	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CEQ03_RS10420	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CEQ03_RS10425	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CEQ03_RS10430	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CEQ03_RS10440	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CEQ03_RS10445	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CEQ03_RS10450	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CEQ03_RS10455	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CEQ03_RS10460	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CEQ03_RS10465	COG0255	Belongs to the universal ribosomal protein uL29 family
CEQ03_RS10470	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CEQ03_RS10475	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CEQ03_RS10480	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CEQ03_RS10485	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CEQ03_RS10490	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CEQ03_RS10495	COG0089	rRNA binding
CEQ03_RS10500	COG0088	Forms part of the polypeptide exit tunnel
CEQ03_RS10505	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CEQ03_RS10510	COG0051	transcription antitermination factor activity, RNA binding
CEQ03_RS10515	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CEQ03_RS10520	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CEQ03_RS10525	COG0049	tRNA binding
CEQ03_RS10530	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CEQ03_RS10535	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CEQ03_RS10540	COG0085	RNA polymerase activity
CEQ03_RS10545	COG0222	ribosome binding
CEQ03_RS10550	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CEQ03_RS10560	COG0081	regulation of translation
CEQ03_RS10565	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CEQ03_RS10570	COG0250	Participates in transcription elongation, termination and antitermination
CEQ03_RS10585	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CEQ03_RS10610	COG4242	Belongs to the peptidase S51 family
CEQ03_RS10615	COG4206	TonB-dependent receptor
CEQ03_RS10620	COG0784	Response regulator, receiver
CEQ03_RS10620	COG2205	protein histidine kinase activity
CEQ03_RS10625	COG2199	diguanylate cyclase activity
CEQ03_RS10625	COG2203	Gaf domain
CEQ03_RS10625	COG2200	EAL domain
CEQ03_RS10630	COG2205	protein histidine kinase activity
CEQ03_RS10630	COG0784	Response regulator, receiver
CEQ03_RS10635	COG2197	response regulator
CEQ03_RS10645	COG0012	GTP binding
CEQ03_RS10650	COG0193	aminoacyl-tRNA hydrolase activity
CEQ03_RS10655	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CEQ03_RS10660	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CEQ03_RS10670	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CEQ03_RS10685	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CEQ03_RS10690	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CEQ03_RS10705	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEQ03_RS10710	COG1295	ribonuclease BN
CEQ03_RS10730	COG1404	Belongs to the peptidase S8 family
CEQ03_RS10735	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CEQ03_RS10750	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CEQ03_RS10775	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CEQ03_RS10790	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CEQ03_RS10790	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CEQ03_RS10830	COG3634	alkyl hydroperoxide reductase activity
CEQ03_RS10835	COG0583	DNA-binding transcription factor activity
CEQ03_RS10840	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEQ03_RS10855	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEQ03_RS10865	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CEQ03_RS10885	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CEQ03_RS10890	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CEQ03_RS10895	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ03_RS10900	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ03_RS10910	COG2096	Adenosyltransferase
CEQ03_RS10920	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CEQ03_RS10925	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEQ03_RS10930	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CEQ03_RS10935	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CEQ03_RS10940	COG2967	ApaG domain
CEQ03_RS10945	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CEQ03_RS10950	COG3738	Protein conserved in bacteria
CEQ03_RS10960	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CEQ03_RS10965	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CEQ03_RS10980	COG1704	LemA family
CEQ03_RS10985	COG2814	Major facilitator Superfamily
CEQ03_RS10990	COG0861	Integral membrane protein TerC family
CEQ03_RS10995	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CEQ03_RS11005	COG0642	Histidine kinase
CEQ03_RS11020	COG4181	ATPase activity
CEQ03_RS11025	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CEQ03_RS11040	COG4771	TonB-dependent receptor
CEQ03_RS11050	COG0667	Aldo Keto reductase
CEQ03_RS11055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CEQ03_RS11060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ03_RS11085	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CEQ03_RS11090	COG4106	trans-aconitate 2-methyltransferase activity
CEQ03_RS11120	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CEQ03_RS11125	COG1607	acyl-coa hydrolase
CEQ03_RS11130	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CEQ03_RS11140	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CEQ03_RS11145	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CEQ03_RS11165	COG3279	Response regulator of the LytR AlgR family
CEQ03_RS11170	COG3275	phosphorelay sensor kinase activity
CEQ03_RS11180	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CEQ03_RS11190	COG0494	nUDIX hydrolase
CEQ03_RS11195	COG0653	protein targeting
CEQ03_RS11200	COG0739	heme binding
CEQ03_RS11210	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CEQ03_RS11215	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CEQ03_RS11225	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CEQ03_RS11230	COG1181	Belongs to the D-alanine--D-alanine ligase family
CEQ03_RS11235	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CEQ03_RS11255	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CEQ03_RS11260	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CEQ03_RS11270	COG3116	cell division
CEQ03_RS11275	COG0275	rRNA processing
CEQ03_RS11280	COG2001	Belongs to the MraZ family
CEQ03_RS11315	COG1988	membrane-bound metal-dependent
CEQ03_RS11320	COG0277	FAD linked oxidase domain protein
CEQ03_RS11325	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEQ03_RS11325	COG2755	lipolytic protein G-D-S-L family
CEQ03_RS11335	COG3188	usher protein
CEQ03_RS11350	COG3121	Chaperone
CEQ03_RS11360	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CEQ03_RS11365	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CEQ03_RS11400	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEQ03_RS11400	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEQ03_RS11405	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CEQ03_RS11425	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CEQ03_RS11435	COG0488	(ABC) transporter
CEQ03_RS11440	COG2252	PERMEase
CEQ03_RS11455	COG1215	transferase activity, transferring glycosyl groups
CEQ03_RS11465	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CEQ03_RS11480	COG3121	Chaperone
CEQ03_RS11485	COG3539	Fimbrial protein
CEQ03_RS11495	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CEQ03_RS11510	COG1450	Type ii and iii secretion system protein
CEQ03_RS11525	COG3166	PFAM Fimbrial assembly family protein
CEQ03_RS11530	COG3156	type II secretion system protein K
CEQ03_RS11535	COG4795	General secretion pathway protein
CEQ03_RS11540	COG2165	general secretion pathway protein
CEQ03_RS11545	COG4970	Tfp pilus assembly protein FimT
CEQ03_RS11550	COG2165	general secretion pathway protein
CEQ03_RS11555	COG1459	type II secretion system
CEQ03_RS11560	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CEQ03_RS11565	COG1404	Belongs to the peptidase S8 family
CEQ03_RS11570	COG5295	Hep Hag repeat protein
CEQ03_RS11575	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CEQ03_RS11575	COG0047	phosphoribosylformylglycinamidine synthase activity
CEQ03_RS11585	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEQ03_RS11590	COG4974	Belongs to the 'phage' integrase family
CEQ03_RS11600	COG0795	lipopolysaccharide-transporting ATPase activity
CEQ03_RS11610	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CEQ03_RS11620	COG0525	valine-tRNA ligase activity
CEQ03_RS11630	COG0456	acetyltransferase
CEQ03_RS11640	COG1183	phosphatidylcholine synthase activity
CEQ03_RS11660	COG0442	prolyl-tRNA aminoacylation
CEQ03_RS11675	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CEQ03_RS11680	COG1127	ABC transporter
CEQ03_RS11710	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CEQ03_RS11715	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CEQ03_RS11740	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ03_RS11795	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEQ03_RS11810	COG0626	cystathionine gamma-synthase activity
CEQ03_RS11850	COG0625	glutathione transferase activity
CEQ03_RS11860	COG0513	Belongs to the DEAD box helicase family
CEQ03_RS11875	COG0720	synthase
CEQ03_RS11885	COG0367	asparagine synthase
CEQ03_RS11890	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS11895	COG2205	protein histidine kinase activity
CEQ03_RS11900	COG2205	protein histidine kinase activity
CEQ03_RS11905	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS11910	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEQ03_RS11915	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEQ03_RS11915	COG0785	Cytochrome C biogenesis protein
CEQ03_RS11920	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEQ03_RS11925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ03_RS11930	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CEQ03_RS11935	COG1956	GAF domain-containing protein
CEQ03_RS11960	COG2226	methyltransferase
CEQ03_RS11965	COG0583	DNA-binding transcription factor activity
CEQ03_RS11980	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CEQ03_RS11985	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CEQ03_RS11995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEQ03_RS12000	COG1187	pseudouridine synthase activity
CEQ03_RS12005	COG2813	Specifically methylates the guanine in position
CEQ03_RS12020	COG5002	protein histidine kinase activity
CEQ03_RS12035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEQ03_RS12065	COG1360	Flagellar Motor Protein
CEQ03_RS12090	COG0025	NhaP-type Na H and K H
CEQ03_RS12095	COG3384	dioxygenase
CEQ03_RS12105	COG0583	DNA-binding transcription factor activity
CEQ03_RS12110	COG5001	Diguanylate cyclase
CEQ03_RS12115	COG3590	peptidase
CEQ03_RS12120	COG2814	Major facilitator Superfamily
CEQ03_RS12130	COG1309	transcriptional regulator
CEQ03_RS12150	COG3279	Response regulator of the LytR AlgR family
CEQ03_RS12155	COG3275	phosphorelay sensor kinase activity
CEQ03_RS12185	COG4941	Belongs to the sigma-70 factor family
CEQ03_RS12190	COG5507	3-demethylubiquinone-9 3-methyltransferase
CEQ03_RS12200	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CEQ03_RS12225	COG0741	lytic transglycosylase activity
CEQ03_RS12230	COG1113	amino acid transport
CEQ03_RS12235	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CEQ03_RS12240	COG2814	Major facilitator Superfamily
CEQ03_RS12250	COG0583	DNA-binding transcription factor activity
CEQ03_RS12255	COG0488	(ABC) transporter
CEQ03_RS12315	COG2267	carboxylic ester hydrolase activity
CEQ03_RS12390	COG2375	cellular response to nickel ion
CEQ03_RS12405	COG2353	YceI-like domain
CEQ03_RS12410	COG0778	Nitroreductase
CEQ03_RS12440	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CEQ03_RS12445	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CEQ03_RS12455	COG5383	Protein conserved in bacteria
CEQ03_RS12485	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CEQ03_RS12505	COG4948	Mandelate Racemase Muconate Lactonizing
CEQ03_RS12510	COG1737	Transcriptional regulator
CEQ03_RS12520	COG0531	amino acid
CEQ03_RS12530	COG4682	membrane
CEQ03_RS12535	COG2133	pyrroloquinoline quinone binding
CEQ03_RS12550	COG0668	transmembrane transport
CEQ03_RS12555	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CEQ03_RS12565	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CEQ03_RS12580	COG1295	ribonuclease BN
CEQ03_RS12585	COG0358	DNA primase activity
CEQ03_RS12605	COG0109	protoheme IX farnesyltransferase activity
CEQ03_RS12650	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CEQ03_RS12685	COG0793	Belongs to the peptidase S41A family
CEQ03_RS12690	COG4942	peptidase
CEQ03_RS12700	COG2234	aminopeptidase activity
CEQ03_RS12760	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CEQ03_RS12765	COG0739	heme binding
CEQ03_RS12780	COG2223	nitrite transmembrane transporter activity
CEQ03_RS12785	COG0708	Exodeoxyribonuclease III
CEQ03_RS12790	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CEQ03_RS12805	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CEQ03_RS12810	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CEQ03_RS12820	COG2205	protein histidine kinase activity
CEQ03_RS12835	COG0756	dUTP diphosphatase activity
CEQ03_RS12840	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CEQ03_RS12845	COG2197	response regulator
CEQ03_RS12850	COG2003	Belongs to the UPF0758 family
CEQ03_RS12855	COG0018	arginyl-trna synthetase
CEQ03_RS12865	COG4221	oxidoreductase activity
CEQ03_RS12875	COG4807	Protein conserved in bacteria
CEQ03_RS12880	COG0583	DNA-binding transcription factor activity
CEQ03_RS12885	COG2814	Major facilitator Superfamily
CEQ03_RS12900	COG2197	response regulator
CEQ03_RS12915	COG5507	3-demethylubiquinone-9 3-methyltransferase
CEQ03_RS12930	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEQ03_RS12950	COG0628	permease
CEQ03_RS12965	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CEQ03_RS12970	COG0753	catalase activity
CEQ03_RS12980	COG2197	response regulator
CEQ03_RS12985	COG4585	Histidine kinase
CEQ03_RS13005	COG1136	(ABC) transporter
CEQ03_RS13015	COG1136	(ABC) transporter
CEQ03_RS13015	COG0577	efflux transmembrane transporter activity
CEQ03_RS13020	COG4206	TonB-dependent receptor
CEQ03_RS13030	COG0697	spore germination
CEQ03_RS13045	COG4152	abc transporter atp-binding protein
CEQ03_RS13055	COG0477	Major facilitator Superfamily
CEQ03_RS13080	COG0180	Tryptophanyl-tRNA synthetase
CEQ03_RS13090	COG3237	CsbD-like
CEQ03_RS13130	COG3657	addiction module killer protein
CEQ03_RS13145	COG0477	Major facilitator Superfamily
CEQ03_RS13160	COG0154	amidase activity
CEQ03_RS13165	COG0066	3-isopropylmalate dehydratase activity
CEQ03_RS13180	COG0840	transmembrane signaling receptor activity
CEQ03_RS13185	COG0840	transmembrane signaling receptor activity
CEQ03_RS13185	COG0840	transmembrane signaling receptor activity
CEQ03_RS13235	COG1902	pentaerythritol trinitrate reductase activity
CEQ03_RS13265	COG0582	viral genome integration into host DNA
CEQ03_RS13280	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CEQ03_RS13285	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CEQ03_RS13285	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CEQ03_RS13295	COG3228	Belongs to the MtfA family
CEQ03_RS13330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CEQ03_RS13355	COG1764	response to oxidative stress
CEQ03_RS13365	COG1024	Enoyl-CoA hydratase
CEQ03_RS13370	COG1024	Enoyl-CoA hydratase
CEQ03_RS13375	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS13385	COG1396	sequence-specific DNA binding
CEQ03_RS13385	COG3800	Transcriptional regulator
CEQ03_RS13400	COG1752	Esterase of the alpha-beta hydrolase superfamily
CEQ03_RS13405	COG1056	cytidyltransferase-related domain
CEQ03_RS13405	COG1051	belongs to the nudix hydrolase family
CEQ03_RS13415	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CEQ03_RS13420	COG1335	isochorismatase
CEQ03_RS13435	COG1902	pentaerythritol trinitrate reductase activity
CEQ03_RS13445	COG1607	acyl-coa hydrolase
CEQ03_RS13450	COG1280	lysine exporter protein (LysE YggA)
CEQ03_RS13460	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CEQ03_RS13475	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CEQ03_RS13485	COG0697	spore germination
CEQ03_RS13505	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS13510	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CEQ03_RS13535	COG3706	GGDEF domain
CEQ03_RS13540	COG2224	Isocitrate lyase
CEQ03_RS13545	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CEQ03_RS13550	COG0583	DNA-binding transcription factor activity
CEQ03_RS13555	COG0583	DNA-binding transcription factor activity
CEQ03_RS13560	COG2814	Major facilitator Superfamily
CEQ03_RS13565	COG0681	Belongs to the peptidase S26 family
CEQ03_RS13580	COG0339	signal peptide processing
CEQ03_RS13610	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CEQ03_RS13615	COG1215	transferase activity, transferring glycosyl groups
CEQ03_RS13630	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CEQ03_RS13645	COG1181	Belongs to the D-alanine--D-alanine ligase family
CEQ03_RS13655	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEQ03_RS13660	COG0318	PFAM AMP-dependent synthetase and ligase
CEQ03_RS13670	COG0596	Alpha beta hydrolase
CEQ03_RS13675	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CEQ03_RS13685	COG0612	Peptidase, M16
CEQ03_RS13695	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CEQ03_RS13700	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS13710	COG3474	cytochrome
CEQ03_RS13720	COG2197	response regulator
CEQ03_RS13760	COG2837	iron assimilation
CEQ03_RS13800	COG0431	NADPH-dependent FMN reductase
CEQ03_RS13810	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CEQ03_RS13815	COG0798	PFAM Bile acid sodium symporter
CEQ03_RS13835	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CEQ03_RS13840	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CEQ03_RS13875	COG0183	Belongs to the thiolase family
CEQ03_RS13885	COG2032	superoxide dismutase activity
CEQ03_RS13890	COG2032	superoxide dismutase activity
CEQ03_RS13895	COG2204	response regulator
CEQ03_RS13900	COG3852	Histidine kinase
CEQ03_RS13915	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CEQ03_RS13925	COG3023	N-Acetylmuramoyl-L-alanine amidase
CEQ03_RS13930	COG0004	ammonium transporteR
CEQ03_RS13935	COG0347	Belongs to the P(II) protein family
CEQ03_RS13940	COG0174	glutamine synthetase
CEQ03_RS13945	COG1968	undecaprenyl-diphosphatase activity
CEQ03_RS13960	COG1881	PFAM PEBP family protein
CEQ03_RS13985	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEQ03_RS14005	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CEQ03_RS14025	COG3550	peptidyl-serine autophosphorylation
CEQ03_RS14035	COG0312	modulator of DNA gyrase
CEQ03_RS14055	COG0714	Associated with various cellular activities
CEQ03_RS14090	COG1111	helicase
CEQ03_RS14090	COG1205	dead DEAH box helicase
CEQ03_RS14115	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CEQ03_RS14130	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS14150	COG0070	glutamate synthase
CEQ03_RS14150	COG0067	glutamate synthase
CEQ03_RS14150	COG0069	glutamate synthase activity
CEQ03_RS14155	COG0493	'glutamate synthase
CEQ03_RS14165	COG1803	Methylglyoxal synthase
CEQ03_RS14175	COG2974	May be involved in recombination
CEQ03_RS14180	COG0037	tRNA processing
CEQ03_RS14190	COG2937	Belongs to the GPAT DAPAT family
CEQ03_RS14200	COG0284	orotidine-5'-phosphate decarboxylase activity
CEQ03_RS14205	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CEQ03_RS14210	COG3132	Protein of unknown function, DUF480
CEQ03_RS14220	COG0210	DNA helicase
CEQ03_RS14245	COG1476	TRANSCRIPTIONal
CEQ03_RS14260	COG1435	thymidine kinase activity
CEQ03_RS14270	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
CEQ03_RS14275	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CEQ03_RS14290	COG1119	ATPase activity
CEQ03_RS14305	COG0671	phosphoesterase, PA-phosphatase related
CEQ03_RS14310	COG4771	TonB-dependent receptor
CEQ03_RS14320	COG1752	Esterase of the alpha-beta hydrolase superfamily
CEQ03_RS14330	COG1522	sequence-specific DNA binding
CEQ03_RS14335	COG3186	Phenylalanine-4-hydroxylase
CEQ03_RS14355	COG0800	Aldolase
CEQ03_RS14390	COG4772	TonB-dependent receptor
CEQ03_RS14400	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CEQ03_RS14445	COG0640	Transcriptional regulator
CEQ03_RS14465	COG3453	Protein conserved in bacteria
CEQ03_RS14465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEQ03_RS14480	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CEQ03_RS14500	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CEQ03_RS14515	COG0431	NADPH-dependent FMN reductase
CEQ03_RS14530	COG0798	PFAM Bile acid sodium symporter
CEQ03_RS14545	COG0659	secondary active sulfate transmembrane transporter activity
CEQ03_RS14645	COG0501	Belongs to the peptidase M48B family
CEQ03_RS14650	COG1266	CAAX protease self-immunity
CEQ03_RS14655	COG0187	DNA topoisomerase II activity
CEQ03_RS14660	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEQ03_RS14670	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CEQ03_RS14675	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CEQ03_RS14680	COG0594	ribonuclease P activity
CEQ03_RS14685	COG0706	membrane insertase activity
CEQ03_RS14700	COG0584	glycerophosphoryl diester phosphodiesterase
CEQ03_RS14710	COG0861	Integral membrane protein TerC family
CEQ03_RS14715	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CEQ03_RS14725	COG0531	amino acid
CEQ03_RS14745	COG0583	DNA-binding transcription factor activity
CEQ03_RS14750	COG0604	alcohol dehydrogenase
CEQ03_RS14760	COG1322	Protein conserved in bacteria
CEQ03_RS14770	COG0386	Belongs to the glutathione peroxidase family
CEQ03_RS14775	COG2853	Lipoprotein
CEQ03_RS14790	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CEQ03_RS14795	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CEQ03_RS14800	COG1127	ABC transporter
CEQ03_RS14805	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CEQ03_RS14810	COG1074	ATP-dependent DNA helicase activity
CEQ03_RS14830	COG1289	transmembrane transporter activity
CEQ03_RS14840	COG1566	PFAM secretion protein HlyD family protein
CEQ03_RS14855	COG0302	gtp cyclohydrolase
CEQ03_RS14885	COG3706	GGDEF domain
CEQ03_RS14890	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CEQ03_RS14895	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CEQ03_RS14900	COG2951	lytic endotransglycosylase activity
CEQ03_RS14915	COG3135	benzoate transporter
CEQ03_RS14970	COG0840	transmembrane signaling receptor activity
CEQ03_RS14975	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CEQ03_RS14975	COG0596	Alpha beta hydrolase
CEQ03_RS14980	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CEQ03_RS14990	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CEQ03_RS15000	COG0805	protein transport
CEQ03_RS15010	COG0519	Catalyzes the synthesis of GMP from XMP
CEQ03_RS15010	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CEQ03_RS15015	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CEQ03_RS15020	COG0752	glycyl-tRNA synthetase alpha subunit
CEQ03_RS15030	COG0729	surface antigen
CEQ03_RS15035	COG2911	Protein conserved in bacteria
CEQ03_RS15045	COG0443	Heat shock 70 kDa protein
CEQ03_RS15055	COG0784	Response regulator, receiver
CEQ03_RS15055	COG2205	protein histidine kinase activity
CEQ03_RS15060	COG1971	Probably functions as a manganese efflux pump
CEQ03_RS15100	COG2091	lysine biosynthetic process via aminoadipic acid
CEQ03_RS15105	COG0357	Ribosomal RNA small subunit methyltransferase G
CEQ03_RS15110	COG1192	Involved in chromosome partitioning
CEQ03_RS15115	COG1475	DNA binding
CEQ03_RS15130	COG0463	Glycosyl transferase, family 2
CEQ03_RS15165	COG0251	oxidation-reduction process
CEQ03_RS15180	COG1819	glycosyl
CEQ03_RS15185	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CEQ03_RS15190	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CEQ03_RS15195	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEQ03_RS15205	COG0210	DNA helicase
CEQ03_RS15225	COG0589	response to stress
CEQ03_RS15240	COG2323	membrane
CEQ03_RS15250	COG0408	coproporphyrinogen oxidase activity
CEQ03_RS15285	COG1595	DNA-templated transcription, initiation
CEQ03_RS15315	COG1271	oxidase subunit
CEQ03_RS15320	COG1294	oxidase, subunit
CEQ03_RS15335	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEQ03_RS15340	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEQ03_RS15355	COG0463	Glycosyl transferase, family 2
CEQ03_RS15365	COG2986	histidine ammonia-lyase
CEQ03_RS15405	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS15410	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEQ03_RS15420	COG3100	YcgL domain-containing protein
CEQ03_RS15425	COG3177	Filamentation induced by cAMP protein fic
CEQ03_RS15425	COG0666	response to abiotic stimulus
CEQ03_RS15435	COG2239	Acts as a magnesium transporter
CEQ03_RS15440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEQ03_RS15440	COG0045	succinate-CoA ligase (ADP-forming) activity
CEQ03_RS15440	COG1042	CoA-binding domain protein
CEQ03_RS15445	COG0393	Putative heavy-metal-binding
CEQ03_RS15450	COG2267	carboxylic ester hydrolase activity
CEQ03_RS15460	COG2814	Major facilitator Superfamily
CEQ03_RS15465	COG0583	DNA-binding transcription factor activity
CEQ03_RS15470	COG0840	transmembrane signaling receptor activity
CEQ03_RS15485	COG1690	Belongs to the RtcB family
CEQ03_RS15500	COG0667	Aldo Keto reductase
CEQ03_RS15515	COG1187	pseudouridine synthase activity
CEQ03_RS15525	COG1643	Atp-dependent helicase
CEQ03_RS15540	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEQ03_RS15565	COG0842	Transport permease protein
CEQ03_RS15570	COG1131	(ABC) transporter
CEQ03_RS15575	COG0543	2 iron, 2 sulfur cluster binding
CEQ03_RS15575	COG0633	Ferredoxin
CEQ03_RS15605	COG4555	ABC transporter
CEQ03_RS15620	COG2207	Transcriptional regulator
CEQ03_RS15640	COG0625	glutathione transferase activity
CEQ03_RS15670	COG3781	membrane
CEQ03_RS15690	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEQ03_RS15700	COG1199	ATP-dependent helicase activity
CEQ03_RS15705	COG0129	dihydroxy-acid dehydratase activity
CEQ03_RS15720	COG0754	glutathionylspermidine amidase activity
CEQ03_RS15735	COG0714	Associated with various cellular activities
CEQ03_RS15760	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CEQ03_RS15765	COG3541	Predicted nucleotidyltransferase
CEQ03_RS15770	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS15775	COG2205	protein histidine kinase activity
CEQ03_RS15780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS15785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS15805	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CEQ03_RS15825	COG2267	carboxylic ester hydrolase activity
CEQ03_RS15830	COG0156	8-amino-7-oxononanoate synthase activity
CEQ03_RS15835	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CEQ03_RS15855	COG1040	competence protein
CEQ03_RS15885	COG2814	Major facilitator Superfamily
CEQ03_RS15890	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CEQ03_RS15895	COG1349	DNA-binding transcription factor activity
CEQ03_RS15905	COG1940	carbohydrate kinase activity
CEQ03_RS15910	COG2222	sugar isomerase
CEQ03_RS15915	COG1501	Belongs to the glycosyl hydrolase 31 family
CEQ03_RS15925	COG0673	inositol 2-dehydrogenase activity
CEQ03_RS15950	COG2031	fatty acid transporter
CEQ03_RS16000	COG1104	cysteine desulfurase activity
CEQ03_RS16005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ03_RS16020	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEQ03_RS16025	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CEQ03_RS16035	COG1845	cytochrome c oxidase, subunit III
CEQ03_RS16040	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CEQ03_RS16045	COG1999	signal sequence binding
CEQ03_RS16075	COG3932	Exopolysaccharide synthesis, ExoD
CEQ03_RS16080	COG0561	phosphatase activity
CEQ03_RS16135	COG2801	Transposase and inactivated derivatives
CEQ03_RS16160	COG5642	Protein of unknown function (DUF2384)
CEQ03_RS16195	COG4735	regulation of single-species biofilm formation
CEQ03_RS16225	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CEQ03_RS16235	COG0602	queuosine metabolic process
CEQ03_RS16275	COG0606	chelatase, subunit chli
CEQ03_RS16335	COG2960	long-chain fatty acid transporting porin activity
CEQ03_RS16345	COG2801	Transposase and inactivated derivatives
CEQ03_RS16345	COG3415	Transposase
CEQ03_RS16360	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CEQ03_RS16365	COG1166	arginine decarboxylase activity
CEQ03_RS16405	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CEQ03_RS16420	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CEQ03_RS16420	COG3264	Mechanosensitive ion channel
CEQ03_RS16435	COG1368	sulfuric ester hydrolase activity
CEQ03_RS16440	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CEQ03_RS16445	COG2354	Protein conserved in bacteria
CEQ03_RS16460	COG2378	regulation of single-species biofilm formation
CEQ03_RS16490	COG3483	tryptophan 2,3-dioxygenase activity
CEQ03_RS16495	COG3104	oligopeptide transport
CEQ03_RS16510	COG4804	nuclease activity
CEQ03_RS16525	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CEQ03_RS16540	COG0530	calcium, potassium:sodium antiporter activity
CEQ03_RS16545	COG1320	monovalent cation:proton antiporter activity
CEQ03_RS16550	COG2212	antiporter activity
CEQ03_RS16555	COG1863	multisubunit Na H antiporter MnhE subunit
CEQ03_RS16560	COG0651	ATP synthesis coupled electron transport
CEQ03_RS16565	COG1006	Multisubunit Na H antiporter MnhC subunit
CEQ03_RS16570	COG2111	Na H antiporter
CEQ03_RS16570	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CEQ03_RS16580	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CEQ03_RS16585	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CEQ03_RS16600	COG1597	lipid kinase activity
CEQ03_RS16620	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CEQ03_RS16625	COG0134	indole-3-glycerol-phosphate synthase activity
CEQ03_RS16635	COG0730	response to heat
CEQ03_RS16640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEQ03_RS16645	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CEQ03_RS16655	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CEQ03_RS16660	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CEQ03_RS16665	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CEQ03_RS16680	COG1051	belongs to the nudix hydrolase family
CEQ03_RS16720	COG0316	Belongs to the HesB IscA family
CEQ03_RS16750	COG2814	Major facilitator Superfamily
CEQ03_RS16755	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS16760	COG1289	transmembrane transporter activity
CEQ03_RS16765	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS16770	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS16775	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS16780	COG1473	amidohydrolase
CEQ03_RS16790	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CEQ03_RS16790	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CEQ03_RS16795	COG1652	LysM domain
CEQ03_RS16830	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CEQ03_RS16840	COG3706	GGDEF domain
CEQ03_RS16845	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CEQ03_RS16850	COG3118	belongs to the thioredoxin family
CEQ03_RS16865	COG2884	Cell division ATP-binding protein ftsE
CEQ03_RS16870	COG2177	Part of the ABC transporter FtsEX involved in
CEQ03_RS16875	COG2201	protein-glutamate methylesterase activity
CEQ03_RS16880	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CEQ03_RS16885	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CEQ03_RS16900	COG0151	Belongs to the GarS family
CEQ03_RS16905	COG0138	bifunctional purine biosynthesis protein purh
CEQ03_RS16910	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CEQ03_RS16915	COG2267	carboxylic ester hydrolase activity
CEQ03_RS16920	COG0671	phosphoesterase, PA-phosphatase related
CEQ03_RS16920	COG2453	phosphatase
CEQ03_RS16930	COG0204	Acyl-transferase
CEQ03_RS16935	COG4589	Belongs to the CDS family
CEQ03_RS16940	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CEQ03_RS16950	COG2264	protein methyltransferase activity
CEQ03_RS16965	COG0439	Biotin carboxylase
CEQ03_RS16970	COG0511	ligase activity, forming carbon-carbon bonds
CEQ03_RS16975	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CEQ03_RS16985	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CEQ03_RS16995	COG2249	NAD(P)H dehydrogenase (quinone) activity
CEQ03_RS17005	COG1686	Belongs to the peptidase S11 family
CEQ03_RS17010	COG1785	Belongs to the alkaline phosphatase family
CEQ03_RS17020	COG0583	DNA-binding transcription factor activity
CEQ03_RS17040	COG4585	Histidine kinase
CEQ03_RS17060	COG0840	transmembrane signaling receptor activity
CEQ03_RS17075	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEQ03_RS17085	COG1324	tolerance protein
CEQ03_RS17090	COG2356	endonuclease I
CEQ03_RS17095	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CEQ03_RS17100	COG0459	protein refolding
CEQ03_RS17130	COG1846	Transcriptional regulator
CEQ03_RS17150	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CEQ03_RS17160	COG2860	membrane
CEQ03_RS17180	COG1252	NADH dehydrogenase
CEQ03_RS17190	COG0625	glutathione transferase activity
CEQ03_RS17195	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CEQ03_RS17210	COG0534	Mate efflux family protein
CEQ03_RS17215	COG0616	signal peptide processing
CEQ03_RS17225	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS17240	COG0009	L-threonylcarbamoyladenylate synthase
CEQ03_RS17245	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CEQ03_RS17245	COG1754	DNA topoisomerase type I activity
CEQ03_RS17250	COG1714	RDD family
CEQ03_RS17260	COG2922	Belongs to the Smg family
CEQ03_RS17265	COG0758	DNA mediated transformation
CEQ03_RS17275	COG0242	peptide deformylase activity
CEQ03_RS17280	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CEQ03_RS17285	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CEQ03_RS17285	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CEQ03_RS17320	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CEQ03_RS17330	COG1490	D-aminoacyl-tRNA deacylase activity
CEQ03_RS17335	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CEQ03_RS17360	COG2259	Doxx family
CEQ03_RS17375	COG0625	glutathione transferase activity
CEQ03_RS17395	COG4206	TonB-dependent receptor
CEQ03_RS17440	COG0477	Major facilitator Superfamily
CEQ03_RS17460	COG0840	transmembrane signaling receptor activity
CEQ03_RS17470	COG4771	TonB-dependent receptor
CEQ03_RS17490	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS17490	COG2972	Histidine kinase
CEQ03_RS17500	COG0181	hydroxymethylbilane synthase activity
CEQ03_RS17525	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CEQ03_RS17545	COG0508	dehydrogenase complex catalyzes the overall conversion of
CEQ03_RS17550	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEQ03_RS17565	COG0356	it plays a direct role in the translocation of protons across the membrane
CEQ03_RS17575	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CEQ03_RS17580	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CEQ03_RS17585	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CEQ03_RS17590	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CEQ03_RS17595	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CEQ03_RS17600	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CEQ03_RS17610	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CEQ03_RS17620	COG4191	Histidine kinase
CEQ03_RS17625	COG2204	response regulator
CEQ03_RS17635	COG0577	efflux transmembrane transporter activity
CEQ03_RS17640	COG0577	efflux transmembrane transporter activity
CEQ03_RS17640	COG1136	(ABC) transporter
CEQ03_RS17645	COG1136	(ABC) transporter
CEQ03_RS17655	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CEQ03_RS17675	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CEQ03_RS17685	COG0339	signal peptide processing
CEQ03_RS17700	COG1666	GTP binding
CEQ03_RS17705	COG0697	spore germination
CEQ03_RS17730	COG1505	serine-type exopeptidase activity
CEQ03_RS17735	COG0436	Aminotransferase
CEQ03_RS17745	COG2832	Protein of unknown function (DUF454)
CEQ03_RS17755	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CEQ03_RS17770	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CEQ03_RS17780	COG0673	inositol 2-dehydrogenase activity
CEQ03_RS17795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS17825	COG2226	methyltransferase
CEQ03_RS17830	COG0308	aminopeptidase N
CEQ03_RS17845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEQ03_RS17850	COG1077	Cell shape determining protein MreB Mrl
CEQ03_RS17855	COG1792	Involved in formation and maintenance of cell shape
CEQ03_RS17870	COG0772	Belongs to the SEDS family
CEQ03_RS17875	COG0772	Belongs to the SEDS family
CEQ03_RS17885	COG2951	lytic endotransglycosylase activity
CEQ03_RS17890	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CEQ03_RS17895	COG1686	Belongs to the peptidase S11 family
CEQ03_RS17905	COG2921	Belongs to the UPF0250 family
CEQ03_RS17915	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CEQ03_RS17935	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CEQ03_RS17940	COG0673	inositol 2-dehydrogenase activity
CEQ03_RS17945	COG2823	Periplasmic or secreted lipoprotein
CEQ03_RS17950	COG4251	negative regulation of phosphorylation
CEQ03_RS17955	COG0784	Response regulator, receiver
CEQ03_RS17960	COG4191	Histidine kinase
CEQ03_RS17970	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CEQ03_RS17990	COG3525	Glycosyl hydrolase, family 20, catalytic domain
CEQ03_RS18000	COG0837	glucose binding
CEQ03_RS18010	COG1609	Transcriptional regulator
CEQ03_RS18015	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CEQ03_RS18020	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CEQ03_RS18030	COG3468	outer membrane autotransporter barrel domain protein
CEQ03_RS18070	COG0617	tRNA 3'-terminal CCA addition
CEQ03_RS18095	COG4773	Receptor
CEQ03_RS18105	COG1522	sequence-specific DNA binding
CEQ03_RS18120	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEQ03_RS18125	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEQ03_RS18135	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CEQ03_RS18140	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CEQ03_RS18165	COG1064	alcohol dehydrogenase
CEQ03_RS18170	COG0583	DNA-binding transcription factor activity
CEQ03_RS18195	COG1902	pentaerythritol trinitrate reductase activity
CEQ03_RS18210	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CEQ03_RS18220	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CEQ03_RS18225	COG5001	Diguanylate cyclase
CEQ03_RS18225	COG2203	Gaf domain
CEQ03_RS18225	COG3706	GGDEF domain
CEQ03_RS18225	COG4251	negative regulation of phosphorylation
CEQ03_RS18270	COG1307	EDD domain protein, DegV family
CEQ03_RS18280	COG0804	urea catabolic process
CEQ03_RS18285	COG1228	amidohydrolase
CEQ03_RS18300	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CEQ03_RS18320	COG0436	Aminotransferase
CEQ03_RS18325	COG1162	GTPase activity
CEQ03_RS18345	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS18350	COG2851	Citrate transporter
CEQ03_RS18365	COG0642	Histidine kinase
CEQ03_RS18380	COG4191	Histidine kinase
CEQ03_RS18390	COG1301	dicarboxylic acid transport
CEQ03_RS18430	COG1560	Kdo2-lipid A biosynthetic process
CEQ03_RS18435	COG1519	Transferase
CEQ03_RS18440	COG0531	amino acid
CEQ03_RS18445	COG1538	Outer membrane efflux protein
CEQ03_RS18450	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CEQ03_RS18460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS18465	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS18480	COG0473	3-isopropylmalate dehydrogenase activity
CEQ03_RS18495	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEQ03_RS18500	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CEQ03_RS18520	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CEQ03_RS18525	COG0405	Gamma-glutamyltransferase
CEQ03_RS18530	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CEQ03_RS18535	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CEQ03_RS18545	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS18570	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CEQ03_RS18605	COG2832	Protein of unknown function (DUF454)
CEQ03_RS18615	COG0848	biopolymer transport protein
CEQ03_RS18625	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
CEQ03_RS18645	COG0563	adenylate kinase activity
CEQ03_RS18650	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CEQ03_RS18660	COG0671	phosphoesterase, PA-phosphatase related
CEQ03_RS18680	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS18690	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEQ03_RS18695	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CEQ03_RS18705	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CEQ03_RS18710	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CEQ03_RS18720	COG1773	rubredoxin
CEQ03_RS18725	COG2912	Transglutaminase-like superfamily
CEQ03_RS18735	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CEQ03_RS18745	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CEQ03_RS18765	COG3079	Belongs to the UPF0149 family
CEQ03_RS18770	COG0006	proline dipeptidase activity
CEQ03_RS18790	COG2974	May be involved in recombination
CEQ03_RS18925	COG4373	Mu-like prophage FluMu protein gp28
CEQ03_RS19045	COG0006	proline dipeptidase activity
CEQ03_RS19060	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CEQ03_RS19070	COG0346	lactoylglutathione lyase activity
CEQ03_RS19075	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CEQ03_RS19080	COG1561	YicC-like family, N-terminal region
CEQ03_RS19085	COG0709	Synthesizes selenophosphate from selenide and ATP
CEQ03_RS19095	COG3276	selenocysteine insertion sequence binding
CEQ03_RS19100	COG1921	L-seryl-tRNASec selenium transferase activity
CEQ03_RS19110	COG2864	formate dehydrogenase
CEQ03_RS19115	COG0437	4 iron, 4 sulfur cluster binding
CEQ03_RS19120	COG0243	molybdopterin cofactor binding
CEQ03_RS19120	COG3383	formate dehydrogenase (NAD+) activity
CEQ03_RS19125	COG0243	molybdopterin cofactor binding
CEQ03_RS19125	COG3383	formate dehydrogenase (NAD+) activity
CEQ03_RS19135	COG1758	RNA polymerase activity
CEQ03_RS19140	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CEQ03_RS19150	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CEQ03_RS19160	COG0254	rRNA binding
CEQ03_RS19210	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CEQ03_RS19240	COG0714	Associated with various cellular activities
CEQ03_RS19270	COG1301	dicarboxylic acid transport
CEQ03_RS19275	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CEQ03_RS19320	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CEQ03_RS19345	COG0126	phosphoglycerate kinase activity
CEQ03_RS19355	COG0469	pyruvate kinase activity
CEQ03_RS19360	COG3588	fructose-bisphosphate aldolase
CEQ03_RS19370	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CEQ03_RS19395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEQ03_RS19400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS19410	COG1115	amino acid carrier protein
CEQ03_RS19415	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CEQ03_RS19425	COG1970	mechanosensitive ion channel activity
CEQ03_RS19450	COG3273	potassium ion transport
CEQ03_RS19450	COG0471	metal ion transport
CEQ03_RS19455	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CEQ03_RS19460	COG2022	thiamine diphosphate biosynthetic process
CEQ03_RS19470	COG4625	pathogenesis
CEQ03_RS19470	COG3240	lipase activity
CEQ03_RS19495	COG0189	ligase activity
CEQ03_RS19510	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS19530	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CEQ03_RS19565	COG0045	succinate-CoA ligase (ADP-forming) activity
CEQ03_RS19575	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CEQ03_RS19575	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CEQ03_RS19585	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEQ03_RS19590	COG0564	pseudouridine synthase activity
CEQ03_RS19605	COG3011	Protein conserved in bacteria
CEQ03_RS19610	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CEQ03_RS19615	COG3387	PFAM Glycoside hydrolase 15-related
CEQ03_RS19640	COG0028	Belongs to the TPP enzyme family
CEQ03_RS19665	COG0542	response to heat
CEQ03_RS19675	COG2205	protein histidine kinase activity
CEQ03_RS19680	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS19690	COG4651	solute:proton antiporter activity
CEQ03_RS19690	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CEQ03_RS19700	COG0488	(ABC) transporter
CEQ03_RS19730	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CEQ03_RS19750	COG0217	transcriptional regulatory protein
CEQ03_RS19755	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CEQ03_RS19760	COG0632	four-way junction helicase activity
CEQ03_RS19775	COG2255	four-way junction helicase activity
CEQ03_RS19780	COG0824	Thioesterase
CEQ03_RS19785	COG0811	peptide transport
CEQ03_RS19800	COG0823	Involved in the tonB-independent uptake of proteins
CEQ03_RS19805	COG2885	chlorophyll binding
CEQ03_RS19820	COG0602	queuosine metabolic process
CEQ03_RS19825	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CEQ03_RS19980	COG0305	Participates in initiation and elongation during chromosome replication
CEQ03_RS20045	COG1783	phage Terminase large subunit
CEQ03_RS20195	COG0514	ATP-dependent DNA helicase (RecQ)
CEQ03_RS20200	COG0783	Belongs to the Dps family
CEQ03_RS20205	COG1643	Atp-dependent helicase
CEQ03_RS20215	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CEQ03_RS20230	COG1215	transferase activity, transferring glycosyl groups
CEQ03_RS20235	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CEQ03_RS20250	COG1199	ATP-dependent helicase activity
CEQ03_RS20255	COG1214	PFAM Peptidase M22, glycoprotease
CEQ03_RS20265	COG0189	ligase activity
CEQ03_RS20280	COG0835	chemotaxis
CEQ03_RS20285	COG0840	transmembrane signaling receptor activity
CEQ03_RS20290	COG0784	Response regulator, receiver
CEQ03_RS20290	COG2198	Histidine kinase
CEQ03_RS20290	COG0643	Histidine kinase
CEQ03_RS20305	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CEQ03_RS20315	COG0494	nUDIX hydrolase
CEQ03_RS20325	COG3956	TIGRFAM MazG family protein
CEQ03_RS20330	COG1742	UPF0060 membrane protein
CEQ03_RS20340	COG0330	HflC and HflK could
CEQ03_RS20350	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CEQ03_RS20355	COG0509	glycine decarboxylation via glycine cleavage system
CEQ03_RS20365	COG0583	DNA-binding transcription factor activity
CEQ03_RS20395	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS20405	COG1309	transcriptional regulator
CEQ03_RS20420	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CEQ03_RS20425	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CEQ03_RS20430	COG0463	Glycosyl transferase, family 2
CEQ03_RS20445	COG1272	protein, Hemolysin III
CEQ03_RS20450	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CEQ03_RS20455	COG0739	heme binding
CEQ03_RS20460	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CEQ03_RS20465	COG0626	cystathionine gamma-synthase activity
CEQ03_RS20470	COG0460	homoserine dehydrogenase
CEQ03_RS20470	COG0527	aspartate kinase activity
CEQ03_RS20475	COG2267	carboxylic ester hydrolase activity
CEQ03_RS20480	COG1760	l-serine dehydratase
CEQ03_RS20495	COG3038	cytochrome b561
CEQ03_RS20510	COG0784	Response regulator, receiver
CEQ03_RS20510	COG2198	Histidine kinase
CEQ03_RS20510	COG5002	protein histidine kinase activity
CEQ03_RS20520	COG0477	Major facilitator Superfamily
CEQ03_RS20540	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CEQ03_RS20555	COG0259	pyridoxamine-phosphate oxidase activity
CEQ03_RS20575	COG3829	transcription factor binding
CEQ03_RS20595	COG3609	addiction module antidote protein, CC2985 family
CEQ03_RS20605	COG2828	Protein conserved in bacteria
CEQ03_RS20610	COG2079	MmgE PrpD family protein
CEQ03_RS20620	COG2373	Large extracellular alpha-helical protein
CEQ03_RS20625	COG4953	penicillin-binding protein 1C
CEQ03_RS20635	COG0678	peroxiredoxin activity
CEQ03_RS20650	COG0604	alcohol dehydrogenase
CEQ03_RS20655	COG0330	HflC and HflK could
CEQ03_RS20660	COG0330	HflC and HflK could
CEQ03_RS20670	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CEQ03_RS20680	COG0739	heme binding
CEQ03_RS20685	COG1376	ErfK ybiS ycfS ynhG family protein
CEQ03_RS20715	COG0753	catalase activity
CEQ03_RS20720	COG1917	Cupin 2, conserved barrel domain protein
CEQ03_RS20720	COG2207	Transcriptional regulator
CEQ03_RS20725	COG1113	amino acid transport
CEQ03_RS20735	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CEQ03_RS20735	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CEQ03_RS20740	COG2814	Major facilitator Superfamily
CEQ03_RS20780	COG2205	protein histidine kinase activity
CEQ03_RS20795	COG2879	small protein
CEQ03_RS20800	COG1966	Carbon starvation protein
CEQ03_RS20810	COG1741	Belongs to the pirin family
CEQ03_RS20820	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CEQ03_RS20825	COG1741	Belongs to the pirin family
CEQ03_RS20845	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEQ03_RS20850	COG0481	GTPase activity
CEQ03_RS20855	COG0681	Belongs to the peptidase S26 family
CEQ03_RS20870	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CEQ03_RS20875	COG1381	Involved in DNA repair and RecF pathway recombination
CEQ03_RS20880	COG0745	RESPONSE REGULATOR receiver
CEQ03_RS20885	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CEQ03_RS20890	COG2954	triphosphatase activity
CEQ03_RS20895	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CEQ03_RS20900	COG1472	Belongs to the glycosyl hydrolase 3 family
CEQ03_RS20905	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CEQ03_RS20910	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CEQ03_RS20915	COG1278	Cold shock
CEQ03_RS20920	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEQ03_RS20935	COG1201	RNA secondary structure unwinding
CEQ03_RS20940	COG1793	dna ligase
CEQ03_RS20950	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS20965	COG0183	Belongs to the thiolase family
CEQ03_RS20985	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEQ03_RS20995	COG1451	nucleotide metabolic process
CEQ03_RS21000	COG3122	Protein conserved in bacteria
CEQ03_RS21005	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CEQ03_RS21045	COG0443	Heat shock 70 kDa protein
CEQ03_RS21050	COG2824	Alkylphosphonate utilization operon protein PhnA
CEQ03_RS21080	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CEQ03_RS21080	COG0392	lysyltransferase activity
CEQ03_RS21085	COG0251	oxidation-reduction process
CEQ03_RS21090	COG2878	Part of a membrane complex involved in electron transport
CEQ03_RS21100	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEQ03_RS21100	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEQ03_RS21110	COG0346	lactoylglutathione lyase activity
CEQ03_RS21115	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CEQ03_RS21125	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CEQ03_RS21145	COG2203	Gaf domain
CEQ03_RS21145	COG3706	GGDEF domain
CEQ03_RS21145	COG4251	negative regulation of phosphorylation
CEQ03_RS21145	COG5001	Diguanylate cyclase
CEQ03_RS21155	COG3118	belongs to the thioredoxin family
CEQ03_RS21165	COG0495	leucyl-tRNA aminoacylation
CEQ03_RS21180	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CEQ03_RS21190	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CEQ03_RS21205	COG4771	TonB-dependent receptor
CEQ03_RS21215	COG2968	Membrane
CEQ03_RS21235	COG0312	modulator of DNA gyrase
CEQ03_RS21240	COG3028	Belongs to the UPF0307 family
CEQ03_RS21245	COG0312	modulator of DNA gyrase
CEQ03_RS21255	COG0142	geranyltranstransferase activity
CEQ03_RS21260	COG1722	exodeoxyribonuclease VII activity
CEQ03_RS21280	COG1301	dicarboxylic acid transport
CEQ03_RS21285	COG0791	NLP P60 protein
CEQ03_RS21290	COG0791	NLP P60 protein
CEQ03_RS21295	COG1047	Peptidyl-prolyl cis-trans
CEQ03_RS21300	COG2311	Membrane
CEQ03_RS21305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEQ03_RS21315	COG0697	spore germination
CEQ03_RS21350	COG3590	peptidase
CEQ03_RS21360	COG4771	TonB-dependent receptor
CEQ03_RS21365	COG4771	TonB-dependent receptor
CEQ03_RS21370	COG0489	protein tyrosine kinase activity
CEQ03_RS21375	COG0717	Belongs to the dCTP deaminase family
CEQ03_RS21385	COG0412	Dienelactone hydrolase
CEQ03_RS21390	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CEQ03_RS21400	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEQ03_RS21405	COG0433	COG0433 Predicted ATPase
CEQ03_RS21420	COG0688	phosphatidylethanolamine metabolic process
CEQ03_RS21425	COG1999	signal sequence binding
CEQ03_RS21430	COG2890	protein-(glutamine-N5) methyltransferase activity
CEQ03_RS21435	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CEQ03_RS21445	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CEQ03_RS21460	COG0101	tRNA pseudouridine synthase activity
CEQ03_RS21465	COG0135	phosphoribosylanthranilate isomerase activity
CEQ03_RS21485	COG0133	tryptophan synthase activity
CEQ03_RS21495	COG0159	tryptophan synthase activity
CEQ03_RS21500	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CEQ03_RS21505	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CEQ03_RS21515	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CEQ03_RS21520	COG0726	polysaccharide deacetylase
CEQ03_RS21525	COG0438	transferase activity, transferring glycosyl groups
CEQ03_RS21530	COG3083	sulfuric ester hydrolase activity
CEQ03_RS21540	COG0149	triose-phosphate isomerase activity
CEQ03_RS21555	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ03_RS21560	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ03_RS21565	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ03_RS21570	COG0649	NAD binding
CEQ03_RS21575	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CEQ03_RS21590	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CEQ03_RS21595	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEQ03_RS21605	COG0713	ATP synthesis coupled electron transport
CEQ03_RS21620	COG1007	ATP synthesis coupled electron transport
CEQ03_RS21635	COG0779	Required for maturation of 30S ribosomal subunits
CEQ03_RS21640	COG0195	Participates in both transcription termination and antitermination
CEQ03_RS21645	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CEQ03_RS21650	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CEQ03_RS21660	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CEQ03_RS21665	COG1185	polyribonucleotide nucleotidyltransferase activity
CEQ03_RS21700	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CEQ03_RS21705	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CEQ03_RS21710	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CEQ03_RS21715	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CEQ03_RS21720	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CEQ03_RS21725	COG0072	phenylalanine-tRNA ligase activity
CEQ03_RS21725	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEQ03_RS21730	COG0776	regulation of translation
CEQ03_RS21765	COG1794	racemase activity, acting on amino acids and derivatives
CEQ03_RS21770	COG1280	lysine exporter protein (LysE YggA)
CEQ03_RS21775	COG5487	UPF0391 membrane protein
CEQ03_RS21780	COG2076	Multidrug Resistance protein
CEQ03_RS21785	COG1309	transcriptional regulator
CEQ03_RS21815	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CEQ03_RS21830	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS21855	COG2130	NADP-dependent
CEQ03_RS21860	COG2169	Transcriptional regulator
CEQ03_RS21860	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CEQ03_RS21890	COG1309	transcriptional regulator
CEQ03_RS21895	COG4771	TonB-dependent receptor
CEQ03_RS21915	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CEQ03_RS21925	COG1570	exodeoxyribonuclease VII activity
CEQ03_RS21930	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CEQ03_RS21935	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CEQ03_RS21935	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CEQ03_RS21940	COG0802	atpase or kinase
CEQ03_RS21945	COG0860	N-Acetylmuramoyl-L-alanine amidase
CEQ03_RS21950	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CEQ03_RS21970	COG1028	Short-chain dehydrogenase reductase Sdr
CEQ03_RS21980	COG0501	Belongs to the peptidase M48B family
CEQ03_RS22005	COG3300	MHYT domain
CEQ03_RS22005	COG5001	Diguanylate cyclase
CEQ03_RS22010	COG1509	lysine 2,3-aminomutase activity
CEQ03_RS22015	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CEQ03_RS22020	COG0402	S-adenosylhomocysteine deaminase activity
CEQ03_RS22025	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEQ03_RS22045	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CEQ03_RS22065	COG2166	iron-sulfur cluster assembly
CEQ03_RS22080	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CEQ03_RS22085	COG0137	argininosuccinate synthase activity
CEQ03_RS22090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CEQ03_RS22095	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CEQ03_RS22105	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CEQ03_RS22110	COG0165	Argininosuccinate lyase
CEQ03_RS22125	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CEQ03_RS22135	COG1215	transferase activity, transferring glycosyl groups
CEQ03_RS22140	COG1649	PFAM Uncharacterised BCR, COG1649
CEQ03_RS22140	COG0726	polysaccharide deacetylase
CEQ03_RS22170	COG1294	oxidase, subunit
CEQ03_RS22180	COG4988	ABC transporter
CEQ03_RS22185	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CEQ03_RS22195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CEQ03_RS22205	COG3088	subunit of a heme lyase
CEQ03_RS22205	COG4235	cytochrome complex assembly
CEQ03_RS22220	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CEQ03_RS22240	COG4133	protoheme IX ABC transporter activity
CEQ03_RS22245	COG0436	Aminotransferase
CEQ03_RS22265	COG2814	Major facilitator Superfamily
CEQ03_RS22275	COG1187	pseudouridine synthase activity
CEQ03_RS22280	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CEQ03_RS22285	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CEQ03_RS22290	COG2350	Protein conserved in bacteria
CEQ03_RS22295	COG0271	Belongs to the BolA IbaG family
CEQ03_RS22325	COG0395	ABC-type sugar transport system, permease component
CEQ03_RS22340	COG1530	ribonuclease E activity
CEQ03_RS22350	COG0428	transporter
CEQ03_RS22360	COG2154	pterin-4-alpha-carbinolamine dehydratase
CEQ03_RS22365	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CEQ03_RS22365	COG0316	Belongs to the HesB IscA family
CEQ03_RS22380	COG4290	ribonuclease
CEQ03_RS22385	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CEQ03_RS22400	COG0705	Rhomboid family
CEQ03_RS22420	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEQ03_RS22430	COG0339	signal peptide processing
CEQ03_RS22435	COG0386	Belongs to the glutathione peroxidase family
CEQ03_RS22450	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEQ03_RS22455	COG1595	DNA-templated transcription, initiation
CEQ03_RS22470	COG0625	glutathione transferase activity
CEQ03_RS22505	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CEQ03_RS22510	COG0084	hydrolase, TatD family'
CEQ03_RS22530	COG0625	glutathione transferase activity
CEQ03_RS22550	COG0305	Participates in initiation and elongation during chromosome replication
CEQ03_RS22560	COG3540	Alkaline phosphatase
CEQ03_RS22585	COG0567	Dehydrogenase, E1 component
CEQ03_RS22595	COG2850	peptidyl-arginine hydroxylation
CEQ03_RS22605	COG0114	fumarate hydratase activity
CEQ03_RS22630	COG1131	(ABC) transporter
CEQ03_RS22635	COG1725	Transcriptional regulator
CEQ03_RS22645	COG0386	Belongs to the glutathione peroxidase family
CEQ03_RS22660	COG2900	Belongs to the SlyX family
CEQ03_RS22680	COG2226	methyltransferase
CEQ03_RS22685	COG1960	acyl-CoA dehydrogenase activity
CEQ03_RS22700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEQ03_RS22705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family