VN11_RS00005	SM00382	ATPases associated with a variety of cellular activities
VN11_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
VN11_RS00010	SM00480	DNA polymerase III beta subunit
VN11_RS00020	SM00387	Histidine kinase-like ATPases
VN11_RS00020	SM00433	TopoisomeraseII
VN11_RS00035	SM00028	Tetratricopeptide repeats
VN11_RS00060	SM00155	Phospholipase D. Active site motifs.
VN11_RS00080	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS00085	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS00140	SM00226	Low molecular weight phosphatase family
VN11_RS00145	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS00205	SM00849	Metallo-beta-lactamase superfamily
VN11_RS00210	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS00215	SM00404	Protein tyrosine phosphatase, catalytic domain motif
VN11_RS00255	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
VN11_RS00270	SM00829	Enoylreductase
VN11_RS00285	SM00354	helix_turn _helix lactose operon repressor
VN11_RS00295	SM00344	helix_turn_helix ASNC type
VN11_RS00325	SM00014	Acid phosphatase homologues
VN11_RS00340	SM00382	ATPases associated with a variety of cellular activities
VN11_RS00355	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
VN11_RS00355	SM01232	VN11_RS00355
VN11_RS00400	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
VN11_RS00405	SM00020	Trypsin-like serine protease
VN11_RS00415	SM00563	Phosphate acyltransferases
VN11_RS00445	SM00387	Histidine kinase-like ATPases
VN11_RS00445	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS00445	SM00448	cheY-homologous receiver domain
VN11_RS00520	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
VN11_RS00530	SM00382	ATPases associated with a variety of cellular activities
VN11_RS00555	SM00487	DEAD-like helicases superfamily
VN11_RS00555	SM00490	helicase superfamily c-terminal domain
VN11_RS00635	SM00382	ATPases associated with a variety of cellular activities
VN11_RS00645	SM00855	Phosphoglycerate mutase family
VN11_RS00650	SM00867	YceI-like domain 
VN11_RS00655	SM00155	Phospholipase D. Active site motifs.
VN11_RS00665	SM00563	Phosphate acyltransferases
VN11_RS00675	SM00028	Tetratricopeptide repeats
VN11_RS00700	SM01230	VN11_RS00700
VN11_RS00705	SM00938	Nitrogen regulatory protein P-II
VN11_RS00735	SM00644	VN11_RS00735
VN11_RS00740	SM00925	MltA specific insert domain
VN11_RS00750	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS00760	SM00387	Histidine kinase-like ATPases
VN11_RS00760	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS00765	SM00382	ATPases associated with a variety of cellular activities
VN11_RS00765	SM00448	cheY-homologous receiver domain
VN11_RS00815	SM00450	Rhodanese Homology Domain
VN11_RS00840	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS00915	SM00421	helix_turn_helix, Lux Regulon
VN11_RS00915	SM00448	cheY-homologous receiver domain
VN11_RS00920	SM00062	Bacterial periplasmic substrate-binding proteins
VN11_RS00920	SM00387	Histidine kinase-like ATPases
VN11_RS00920	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS00920	SM00448	cheY-homologous receiver domain
VN11_RS01020	SM00563	Phosphate acyltransferases
VN11_RS01070	SM00100	Cyclic nucleotide-monophosphate binding domain
VN11_RS01070	SM00267	diguanylate cyclase
VN11_RS01075	SM00028	Tetratricopeptide repeats
VN11_RS01090	SM00878	Biotin carboxylase C-terminal domain
VN11_RS01205	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS01265	SM00448	cheY-homologous receiver domain
VN11_RS01265	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS01270	SM00387	Histidine kinase-like ATPases
VN11_RS01315	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS01365	SM00849	Metallo-beta-lactamase superfamily
VN11_RS01415	SM00382	ATPases associated with a variety of cellular activities
VN11_RS01425	SM00382	ATPases associated with a variety of cellular activities
VN11_RS01435	SM00387	Histidine kinase-like ATPases
VN11_RS01440	SM00421	helix_turn_helix, Lux Regulon
VN11_RS01440	SM00448	cheY-homologous receiver domain
VN11_RS01450	SM01060	VN11_RS01450
VN11_RS01485	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VN11_RS01515	SM00421	helix_turn_helix, Lux Regulon
VN11_RS01515	SM00448	cheY-homologous receiver domain
VN11_RS01545	SM00822	VN11_RS01545
VN11_RS01555	SM00836	DALR anticodon binding domain
VN11_RS01555	SM01016	Arginyl tRNA synthetase N terminal dom
VN11_RS01565	SM00421	helix_turn_helix, Lux Regulon
VN11_RS01565	SM00448	cheY-homologous receiver domain
VN11_RS01585	SM00448	cheY-homologous receiver domain
VN11_RS01585	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS01590	SM00387	Histidine kinase-like ATPases
VN11_RS01590	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS01725	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VN11_RS01725	SM00245	tail specific protease
VN11_RS01830	SM00400	zinc finger
VN11_RS01830	SM00493	VN11_RS01830
VN11_RS01830	SM00766	DNA primase DnaG DnaB-binding
VN11_RS01860	SM00905	Dihydroneopterin aldolase
VN11_RS01870	SM01217	VN11_RS01870
VN11_RS01905	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VN11_RS01915	SM00460	Transglutaminase/protease-like homologues
VN11_RS01955	SM01150	VN11_RS01955
VN11_RS02000	SM00867	YceI-like domain 
VN11_RS02140	SM00833	Cobalamin synthesis protein cobW C-terminal domain
VN11_RS02145	SM00382	ATPases associated with a variety of cellular activities
VN11_RS02165	SM00052	Putative diguanylate phosphodiesterase
VN11_RS02225	SM00387	Histidine kinase-like ATPases
VN11_RS02230	SM00448	cheY-homologous receiver domain
VN11_RS02230	SM00850	LytTr DNA-binding domain
VN11_RS02265	SM00052	Putative diguanylate phosphodiesterase
VN11_RS02265	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS02265	SM00091	PAS domain
VN11_RS02265	SM00267	diguanylate cyclase
VN11_RS02335	SM00344	helix_turn_helix ASNC type
VN11_RS02345	SM01005	Alanine racemase, C-terminal domain
VN11_RS02355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS02355	SM00091	PAS domain
VN11_RS02355	SM00387	Histidine kinase-like ATPases
VN11_RS02355	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS02355	SM00448	cheY-homologous receiver domain
VN11_RS02385	SM00825	Beta-ketoacyl synthase
VN11_RS02400	SM00849	Metallo-beta-lactamase superfamily
VN11_RS02430	SM00855	Phosphoglycerate mutase family
VN11_RS02440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VN11_RS02450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS02470	SM00448	cheY-homologous receiver domain
VN11_RS02470	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS02475	SM00387	Histidine kinase-like ATPases
VN11_RS02475	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS02480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS02480	SM00387	Histidine kinase-like ATPases
VN11_RS02480	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS02485	SM00448	cheY-homologous receiver domain
VN11_RS02485	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS02510	SM00631	VN11_RS02510
VN11_RS02515	SM00487	DEAD-like helicases superfamily
VN11_RS02515	SM00490	helicase superfamily c-terminal domain
VN11_RS02530	SM00986	Uracil DNA glycosylase superfamily
VN11_RS02530	SM00987	UreE urease accessory protein, C-terminal domain 
VN11_RS02535	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS02560	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS02580	SM00382	ATPases associated with a variety of cellular activities
VN11_RS02635	SM00984	UDP binding domain
VN11_RS02685	SM00893	Electron transfer flavoprotein domain
VN11_RS02690	SM00893	Electron transfer flavoprotein domain
VN11_RS02750	SM00882	Coenzyme A transferase
VN11_RS02755	SM00882	Coenzyme A transferase
VN11_RS02780	SM00382	ATPases associated with a variety of cellular activities
VN11_RS02795	SM00528	Domain in histone-like proteins of HNS family
VN11_RS02870	SM00060	Fibronectin type 3 domain
VN11_RS02870	SM00495	Chitin-binding domain type 3
VN11_RS02870	SM00636	VN11_RS02870
VN11_RS02875	SM01211	VN11_RS02875
VN11_RS02890	SM00382	ATPases associated with a variety of cellular activities
VN11_RS03020	SM00028	Tetratricopeptide repeats
VN11_RS03035	SM00382	ATPases associated with a variety of cellular activities
VN11_RS03180	SM00869	Autotransporter beta-domain
VN11_RS03280	SM00842	Cell division protein FtsA
VN11_RS03285	SM00864	Tubulin/FtsZ family, GTPase domain
VN11_RS03285	SM00865	Tubulin/FtsZ family, C-terminal domain
VN11_RS03305	SM00957	SecA DEAD-like domain
VN11_RS03305	SM00958	SecA preprotein cross-linking domain
VN11_RS03335	SM00448	cheY-homologous receiver domain
VN11_RS03335	SM00850	LytTr DNA-binding domain
VN11_RS03370	SM00996	S-adenosyl-L-homocysteine hydrolase
VN11_RS03370	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
VN11_RS03410	SM00563	Phosphate acyltransferases
VN11_RS03490	SM00382	ATPases associated with a variety of cellular activities
VN11_RS03500	SM00448	cheY-homologous receiver domain
VN11_RS03500	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS03505	SM00387	Histidine kinase-like ATPases
VN11_RS03505	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS03575	SM00650	Ribosomal RNA adenine dimethylases
VN11_RS03715	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
VN11_RS03715	SM00475	5'-3' exonuclease
VN11_RS03730	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
VN11_RS03730	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
VN11_RS03825	SM00028	Tetratricopeptide repeats
VN11_RS03830	SM00937	VN11_RS03830
VN11_RS03840	SM00028	Tetratricopeptide repeats
VN11_RS03860	SM01400	VN11_RS03860
VN11_RS03930	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
VN11_RS03930	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
VN11_RS03935	SM00649	Ribosomal protein L11/L12
VN11_RS03960	SM00663	RNA polymerase I subunit A N-terminus
VN11_RS03975	SM00838	Elongation factor G C-terminus
VN11_RS03975	SM00889	Elongation factor G, domain IV
VN11_RS03985	SM01403	VN11_RS03985
VN11_RS04005	SM01382	VN11_RS04005
VN11_RS04005	SM01383	VN11_RS04005
VN11_RS04020	SM00322	K homology RNA-binding domain
VN11_RS04040	SM01374	VN11_RS04040
VN11_RS04045	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
VN11_RS04105	SM00363	S4 RNA-binding domain
VN11_RS04105	SM01390	VN11_RS04105
VN11_RS04110	SM00662	RNA polymerases D
VN11_RS04150	SM00838	Elongation factor G C-terminus
VN11_RS04205	SM00829	Enoylreductase
VN11_RS04220	SM00363	S4 RNA-binding domain
VN11_RS04240	SM00829	Enoylreductase
VN11_RS04250	SM00855	Phosphoglycerate mutase family
VN11_RS04295	SM00014	Acid phosphatase homologues
VN11_RS04320	SM00387	Histidine kinase-like ATPases
VN11_RS04320	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS04325	SM00448	cheY-homologous receiver domain
VN11_RS04325	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS04345	SM01329	VN11_RS04345
VN11_RS04440	SM00448	cheY-homologous receiver domain
VN11_RS04555	SM00475	5'-3' exonuclease
VN11_RS04580	SM00482	DNA polymerase A domain
VN11_RS04595	SM00493	VN11_RS04595
VN11_RS04595	SM00778	Zinc-binding domain of primase-helicase
VN11_RS04630	SM01311	VN11_RS04630
VN11_RS04665	SM00382	ATPases associated with a variety of cellular activities
VN11_RS04665	SM00994	ClpX C4-type zinc finger
VN11_RS04665	SM01086	C-terminal, D2-small domain, of ClpB protein
VN11_RS04670	SM00382	ATPases associated with a variety of cellular activities
VN11_RS04670	SM00464	Found in ATP-dependent protease La (LON)
VN11_RS04675	SM00411	bacterial (prokaryotic) histone like domain
VN11_RS04710	SM00257	Lysin motif
VN11_RS04715	SM00849	Metallo-beta-lactamase superfamily
VN11_RS04730	SM00479	VN11_RS04730
VN11_RS04735	SM00331	Sigma factor PP2C-like phosphatases
VN11_RS04735	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VN11_RS04775	SM00869	Autotransporter beta-domain
VN11_RS04795	SM00382	ATPases associated with a variety of cellular activities
VN11_RS04805	SM00493	VN11_RS04805
VN11_RS04820	SM00460	Transglutaminase/protease-like homologues
VN11_RS04830	SM00382	ATPases associated with a variety of cellular activities
VN11_RS04865	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
VN11_RS04870	SM00822	VN11_RS04870
VN11_RS04880	SM00825	Beta-ketoacyl synthase
VN11_RS05130	SM00420	helix_turn_helix, Deoxyribose operon repressor
VN11_RS05130	SM01134	VN11_RS05130
VN11_RS05145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS05200	SM00422	helix_turn_helix, mercury resistance
VN11_RS05205	SM00822	VN11_RS05205
VN11_RS05225	SM00382	ATPases associated with a variety of cellular activities
VN11_RS05265	SM00732	Likely ribonuclease with RNase H fold.
VN11_RS05275	SM01321	VN11_RS05275
VN11_RS05290	SM00924	MgtE intracellular N domain
VN11_RS05335	SM00382	ATPases associated with a variety of cellular activities
VN11_RS05355	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS05495	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
VN11_RS05545	SM00382	ATPases associated with a variety of cellular activities
VN11_RS05560	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
VN11_RS05585	SM00411	bacterial (prokaryotic) histone like domain
VN11_RS05620	SM00860	SMI1 / KNR4 family
VN11_RS05635	SM00642	Alpha-amylase domain
VN11_RS05660	SM00642	Alpha-amylase domain
VN11_RS05685	SM00382	ATPases associated with a variety of cellular activities
VN11_RS05690	SM00354	helix_turn _helix lactose operon repressor
VN11_RS05745	SM00354	helix_turn _helix lactose operon repressor
VN11_RS05750	SM00267	diguanylate cyclase
VN11_RS05760	SM00267	diguanylate cyclase
VN11_RS05790	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS05795	SM01091	Transporter associated domain
VN11_RS05820	SM00387	Histidine kinase-like ATPases
VN11_RS05825	SM00448	cheY-homologous receiver domain
VN11_RS05825	SM00850	LytTr DNA-binding domain
VN11_RS05845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS05845	SM00895	VN11_RS05845
VN11_RS05855	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
VN11_RS05995	SM00421	helix_turn_helix, Lux Regulon
VN11_RS05995	SM00448	cheY-homologous receiver domain
VN11_RS06035	SM00244	prohibitin homologues
VN11_RS06055	SM00054	EF-hand, calcium binding motif
VN11_RS06125	SM00904	Riboflavin kinase
VN11_RS06170	SM00869	Autotransporter beta-domain
VN11_RS06235	SM00052	Putative diguanylate phosphodiesterase
VN11_RS06235	SM00267	diguanylate cyclase
VN11_RS06240	SM00382	ATPases associated with a variety of cellular activities
VN11_RS06265	SM00382	ATPases associated with a variety of cellular activities
VN11_RS06265	SM00962	SRP54-type protein, GTPase domain
VN11_RS06265	SM00963	SRP54-type protein, helical bundle domain
VN11_RS06330	SM00363	S4 RNA-binding domain
VN11_RS06345	SM01060	VN11_RS06345
VN11_RS06350	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
VN11_RS06350	SM00534	ATPase domain of DNA mismatch repair MUTS family
VN11_RS06370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS06370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS06470	SM00387	Histidine kinase-like ATPases
VN11_RS06470	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS06475	SM00448	cheY-homologous receiver domain
VN11_RS06475	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS06515	SM00267	diguanylate cyclase
VN11_RS06535	SM00855	Phosphoglycerate mutase family
VN11_RS06545	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VN11_RS06550	SM00487	DEAD-like helicases superfamily
VN11_RS06550	SM00490	helicase superfamily c-terminal domain
VN11_RS06550	SM00982	VN11_RS06550
VN11_RS06550	SM01058	CarD-like/TRCF domain
VN11_RS06565	SM00448	cheY-homologous receiver domain
VN11_RS06565	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS06570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS06570	SM00387	Histidine kinase-like ATPases
VN11_RS06570	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS06640	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS06640	SM00478	endonuclease III
VN11_RS06640	SM01009	AlkA N-terminal domain
VN11_RS06670	SM00487	DEAD-like helicases superfamily
VN11_RS06670	SM00490	helicase superfamily c-terminal domain
VN11_RS06675	SM00052	Putative diguanylate phosphodiesterase
VN11_RS06675	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS06675	SM00091	PAS domain
VN11_RS06675	SM00267	diguanylate cyclase
VN11_RS06680	SM00267	diguanylate cyclase
VN11_RS06685	SM00363	S4 RNA-binding domain
VN11_RS06690	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VN11_RS06690	SM00267	diguanylate cyclase
VN11_RS06725	SM00382	ATPases associated with a variety of cellular activities
VN11_RS06805	SM00481	DNA polymerase alpha chain like domain
VN11_RS06840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VN11_RS06870	SM00267	diguanylate cyclase
VN11_RS06895	SM00972	Spore Coat Protein U domain
VN11_RS06910	SM00972	Spore Coat Protein U domain
VN11_RS06920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VN11_RS06945	SM00671	Sel1-like repeats.
VN11_RS06950	SM01172	VN11_RS06950
VN11_RS06965	SM00434	DNA Topoisomerase IV
VN11_RS06970	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS06975	SM00347	helix_turn_helix multiple antibiotic resistance protein
VN11_RS07020	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS07020	SM00357	Cold shock protein domain
VN11_RS07020	SM00955	VN11_RS07020
VN11_RS07030	SM00967	RNA 2'-O ribose methyltransferase substrate binding
VN11_RS07040	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07050	SM00448	cheY-homologous receiver domain
VN11_RS07050	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS07055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS07055	SM00387	Histidine kinase-like ATPases
VN11_RS07055	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS07060	SM00267	diguanylate cyclase
VN11_RS07065	SM00479	VN11_RS07065
VN11_RS07095	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07125	SM00478	endonuclease III
VN11_RS07150	SM00450	Rhodanese Homology Domain
VN11_RS07155	SM00644	VN11_RS07155
VN11_RS07165	SM00981	VN11_RS07165
VN11_RS07225	SM00267	diguanylate cyclase
VN11_RS07225	SM00448	cheY-homologous receiver domain
VN11_RS07255	SM01230	VN11_RS07255
VN11_RS07265	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07295	SM01091	Transporter associated domain
VN11_RS07325	SM00155	Phospholipase D. Active site motifs.
VN11_RS07335	SM00155	Phospholipase D. Active site motifs.
VN11_RS07350	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07360	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS07425	SM01001	AIR carboxylase
VN11_RS07505	SM00487	DEAD-like helicases superfamily
VN11_RS07505	SM00490	helicase superfamily c-terminal domain
VN11_RS07545	SM00448	cheY-homologous receiver domain
VN11_RS07545	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS07550	SM00387	Histidine kinase-like ATPases
VN11_RS07550	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS07555	SM00849	Metallo-beta-lactamase superfamily
VN11_RS07570	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07585	SM00226	Low molecular weight phosphatase family
VN11_RS07595	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VN11_RS07595	SM00465	GIY-YIG type nucleases (URI domain)
VN11_RS07640	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS07720	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS07755	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS07770	SM01034	Sensors of blue-light using FAD
VN11_RS07800	SM00450	Rhodanese Homology Domain
VN11_RS07820	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS07820	SM01091	Transporter associated domain
VN11_RS07845	SM00387	Histidine kinase-like ATPases
VN11_RS07845	SM00433	TopoisomeraseII
VN11_RS07875	SM01192	VN11_RS07875
VN11_RS07875	SM01193	VN11_RS07875
VN11_RS07900	SM00463	Small MutS-related domain
VN11_RS07920	SM00257	Lysin motif
VN11_RS07935	SM01103	VN11_RS07935
VN11_RS07945	SM00382	ATPases associated with a variety of cellular activities
VN11_RS07990	SM00382	ATPases associated with a variety of cellular activities
VN11_RS08000	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VN11_RS08025	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS08055	SM00965	Secretin and TonB N terminus short domain
VN11_RS08155	SM00670	Large family of predicted nucleotide-binding domains
VN11_RS08170	SM01130	VN11_RS08170
VN11_RS08235	SM01260	VN11_RS08235
VN11_RS08240	SM00448	cheY-homologous receiver domain
VN11_RS08245	SM00387	Histidine kinase-like ATPases
VN11_RS08255	SM00014	Acid phosphatase homologues
VN11_RS08260	SM00421	helix_turn_helix, Lux Regulon
VN11_RS08260	SM00448	cheY-homologous receiver domain
VN11_RS08290	SM00382	ATPases associated with a variety of cellular activities
VN11_RS08335	SM00382	ATPases associated with a variety of cellular activities
VN11_RS08350	SM00478	endonuclease III
VN11_RS08355	SM00382	ATPases associated with a variety of cellular activities
VN11_RS08355	SM00962	SRP54-type protein, GTPase domain
VN11_RS08355	SM00963	SRP54-type protein, helical bundle domain
VN11_RS08365	SM00387	Histidine kinase-like ATPases
VN11_RS08395	SM00849	Metallo-beta-lactamase superfamily
VN11_RS08405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS08450	SM00822	VN11_RS08450
VN11_RS08485	SM00822	VN11_RS08485
VN11_RS08515	SM00421	helix_turn_helix, Lux Regulon
VN11_RS08840	SM00495	Chitin-binding domain type 3
VN11_RS08855	SM01034	Sensors of blue-light using FAD
VN11_RS08870	SM01034	Sensors of blue-light using FAD
VN11_RS08950	SM00271	DnaJ molecular chaperone homology domain
VN11_RS08955	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS08980	SM00382	ATPases associated with a variety of cellular activities
VN11_RS09000	SM00052	Putative diguanylate phosphodiesterase
VN11_RS09000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VN11_RS09000	SM00267	diguanylate cyclase
VN11_RS09035	SM01323	VN11_RS09035
VN11_RS09055	SM00052	Putative diguanylate phosphodiesterase
VN11_RS09055	SM00267	diguanylate cyclase
VN11_RS09065	SM01322	VN11_RS09065
VN11_RS09080	SM00357	Cold shock protein domain
VN11_RS09100	SM00382	ATPases associated with a variety of cellular activities
VN11_RS09100	SM00487	DEAD-like helicases superfamily
VN11_RS09100	SM00490	helicase superfamily c-terminal domain
VN11_RS09115	SM00382	ATPases associated with a variety of cellular activities
VN11_RS09180	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS09185	SM00411	bacterial (prokaryotic) histone like domain
VN11_RS09230	SM00562	VN11_RS09230
VN11_RS09240	SM00028	Tetratricopeptide repeats
VN11_RS09245	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS09255	SM00564	beta-propeller repeat
VN11_RS09265	SM00829	Enoylreductase
VN11_RS09275	SM00450	Rhodanese Homology Domain
VN11_RS09290	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS09290	SM01240	VN11_RS09290
VN11_RS09305	SM00487	DEAD-like helicases superfamily
VN11_RS09305	SM00490	helicase superfamily c-terminal domain
VN11_RS09370	SM00822	VN11_RS09370
VN11_RS09390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS09410	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS09430	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS09475	SM00382	ATPases associated with a variety of cellular activities
VN11_RS09480	SM00062	Bacterial periplasmic substrate-binding proteins
VN11_RS09505	SM00822	VN11_RS09505
VN11_RS09520	SM00052	Putative diguanylate phosphodiesterase
VN11_RS09595	SM01130	VN11_RS09595
VN11_RS09605	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS09630	SM00448	cheY-homologous receiver domain
VN11_RS09635	SM00091	PAS domain
VN11_RS09635	SM00387	Histidine kinase-like ATPases
VN11_RS09635	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS09640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VN11_RS09640	SM00387	Histidine kinase-like ATPases
VN11_RS09640	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS09640	SM00448	cheY-homologous receiver domain
VN11_RS09645	SM00138	Methyltransferase, chemotaxis proteins 
VN11_RS09655	SM00387	Histidine kinase-like ATPases
VN11_RS09655	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS09655	SM00448	cheY-homologous receiver domain
VN11_RS09660	SM01034	Sensors of blue-light using FAD
VN11_RS09665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS09690	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS09715	SM00100	Cyclic nucleotide-monophosphate binding domain
VN11_RS09715	SM00419	helix_turn_helix, cAMP Regulatory protein
VN11_RS09815	SM00422	helix_turn_helix, mercury resistance
VN11_RS09835	SM00354	helix_turn _helix lactose operon repressor
VN11_RS09870	SM01007	Class II Aldolase and Adducin N-terminal domain
VN11_RS09910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS09910	SM00387	Histidine kinase-like ATPases
VN11_RS09910	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS09915	SM00448	cheY-homologous receiver domain
VN11_RS09915	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS09940	SM00841	Elongation factor P, C-terminal
VN11_RS09940	SM01185	VN11_RS09940
VN11_RS09945	SM00822	VN11_RS09945
VN11_RS09965	SM00899	VN11_RS09965
VN11_RS09990	SM00422	helix_turn_helix, mercury resistance
VN11_RS10005	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
VN11_RS10010	SM00851	MGS-like domain
VN11_RS10010	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
VN11_RS10050	SM00860	SMI1 / KNR4 family
VN11_RS10065	SM00850	LytTr DNA-binding domain
VN11_RS10075	SM00937	VN11_RS10075
VN11_RS10080	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS10100	SM00448	cheY-homologous receiver domain
VN11_RS10100	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VN11_RS10105	SM00073	Histidine Phosphotransfer domain
VN11_RS10105	SM00387	Histidine kinase-like ATPases
VN11_RS10105	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS10105	SM00448	cheY-homologous receiver domain
VN11_RS10150	SM00966	SpoVT / AbrB like domain 
VN11_RS10175	SM00448	cheY-homologous receiver domain
VN11_RS10185	SM00138	Methyltransferase, chemotaxis proteins 
VN11_RS10190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS10190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS10190	SM01049	VN11_RS10190
VN11_RS10195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS10205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS10205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS10215	SM00260	Two component signalling adaptor domain
VN11_RS10225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS10225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS10230	SM00073	Histidine Phosphotransfer domain
VN11_RS10230	SM00260	Two component signalling adaptor domain
VN11_RS10230	SM00387	Histidine kinase-like ATPases
VN11_RS10230	SM01231	VN11_RS10230
VN11_RS10235	SM00448	cheY-homologous receiver domain
VN11_RS10245	SM00260	Two component signalling adaptor domain
VN11_RS10265	SM00073	Histidine Phosphotransfer domain
VN11_RS10265	SM00260	Two component signalling adaptor domain
VN11_RS10265	SM00387	Histidine kinase-like ATPases
VN11_RS10265	SM01231	VN11_RS10265
VN11_RS10275	SM00448	cheY-homologous receiver domain
VN11_RS10290	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10290	SM00962	SRP54-type protein, GTPase domain
VN11_RS10305	SM00052	Putative diguanylate phosphodiesterase
VN11_RS10305	SM00267	diguanylate cyclase
VN11_RS10355	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10380	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10385	SM00448	cheY-homologous receiver domain
VN11_RS10395	SM00421	helix_turn_helix, Lux Regulon
VN11_RS10395	SM00448	cheY-homologous receiver domain
VN11_RS10445	SM00047	Lysozyme subfamily 2
VN11_RS10490	SM00260	Two component signalling adaptor domain
VN11_RS10490	SM00448	cheY-homologous receiver domain
VN11_RS10495	SM00858	VN11_RS10495
VN11_RS10510	SM00387	Histidine kinase-like ATPases
VN11_RS10515	SM00052	Putative diguanylate phosphodiesterase
VN11_RS10515	SM00267	diguanylate cyclase
VN11_RS10515	SM00448	cheY-homologous receiver domain
VN11_RS10520	SM00091	PAS domain
VN11_RS10520	SM00387	Histidine kinase-like ATPases
VN11_RS10525	SM00052	Putative diguanylate phosphodiesterase
VN11_RS10525	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS10525	SM00267	diguanylate cyclase
VN11_RS10540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS10575	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10575	SM01086	C-terminal, D2-small domain, of ClpB protein
VN11_RS10585	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS10620	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10620	SM00843	VN11_RS10620
VN11_RS10635	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10670	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10680	SM00838	Elongation factor G C-terminus
VN11_RS10680	SM00889	Elongation factor G, domain IV
VN11_RS10695	SM00062	Bacterial periplasmic substrate-binding proteins
VN11_RS10695	SM00387	Histidine kinase-like ATPases
VN11_RS10695	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS10695	SM00448	cheY-homologous receiver domain
VN11_RS10700	SM00421	helix_turn_helix, Lux Regulon
VN11_RS10715	SM00448	cheY-homologous receiver domain
VN11_RS10780	SM00091	PAS domain
VN11_RS10780	SM00387	Histidine kinase-like ATPases
VN11_RS10780	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS10780	SM00448	cheY-homologous receiver domain
VN11_RS10785	SM00448	cheY-homologous receiver domain
VN11_RS10790	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VN11_RS10790	SM00387	Histidine kinase-like ATPases
VN11_RS10790	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS10830	SM00382	ATPases associated with a variety of cellular activities
VN11_RS10860	SM00422	helix_turn_helix, mercury resistance
VN11_RS10915	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS11055	SM00382	ATPases associated with a variety of cellular activities
VN11_RS11075	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS11095	SM00226	Low molecular weight phosphatase family
VN11_RS11100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS11120	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS11165	SM00422	helix_turn_helix, mercury resistance
VN11_RS11270	SM00422	helix_turn_helix, mercury resistance
VN11_RS11285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS11285	SM00387	Histidine kinase-like ATPases
VN11_RS11285	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11290	SM00448	cheY-homologous receiver domain
VN11_RS11290	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS11335	SM00965	Secretin and TonB N terminus short domain
VN11_RS11355	SM00965	Secretin and TonB N terminus short domain
VN11_RS11370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS11370	SM00450	Rhodanese Homology Domain
VN11_RS11385	SM00020	Trypsin-like serine protease
VN11_RS11395	SM00028	Tetratricopeptide repeats
VN11_RS11435	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS11460	SM00387	Histidine kinase-like ATPases
VN11_RS11460	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11460	SM00448	cheY-homologous receiver domain
VN11_RS11465	SM00421	helix_turn_helix, Lux Regulon
VN11_RS11465	SM00448	cheY-homologous receiver domain
VN11_RS11495	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
VN11_RS11500	SM00477	DNA/RNA non-specific endonuclease
VN11_RS11500	SM00892	DNA/RNA non-specific endonuclease
VN11_RS11520	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS11525	SM00382	ATPases associated with a variety of cellular activities
VN11_RS11615	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS11670	SM00091	PAS domain
VN11_RS11670	SM00267	diguanylate cyclase
VN11_RS11680	SM00382	ATPases associated with a variety of cellular activities
VN11_RS11690	SM00448	cheY-homologous receiver domain
VN11_RS11690	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS11695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS11695	SM00387	Histidine kinase-like ATPases
VN11_RS11695	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11750	SM00387	Histidine kinase-like ATPases
VN11_RS11750	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11750	SM00448	cheY-homologous receiver domain
VN11_RS11760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS11760	SM00387	Histidine kinase-like ATPases
VN11_RS11760	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11765	SM00448	cheY-homologous receiver domain
VN11_RS11765	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS11790	SM00831	Cation transporter/ATPase, N-terminus
VN11_RS11800	SM00387	Histidine kinase-like ATPases
VN11_RS11800	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11805	SM00421	helix_turn_helix, Lux Regulon
VN11_RS11805	SM00448	cheY-homologous receiver domain
VN11_RS11850	SM00965	Secretin and TonB N terminus short domain
VN11_RS11855	SM00849	Metallo-beta-lactamase superfamily
VN11_RS11880	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS11915	SM00382	ATPases associated with a variety of cellular activities
VN11_RS11935	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS11950	SM00448	cheY-homologous receiver domain
VN11_RS11950	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS11955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS11955	SM00387	Histidine kinase-like ATPases
VN11_RS11955	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS11980	SM00448	cheY-homologous receiver domain
VN11_RS11980	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS11985	SM00387	Histidine kinase-like ATPases
VN11_RS11985	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS12050	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS12050	SM00911	HWE histidine kinase
VN11_RS12055	SM00448	cheY-homologous receiver domain
VN11_RS12070	SM00965	Secretin and TonB N terminus short domain
VN11_RS12125	SM00560	LamG-like jellyroll fold domain
VN11_RS12160	SM00912	haemagglutination activity domain
VN11_RS12175	SM00382	ATPases associated with a variety of cellular activities
VN11_RS12225	SM00965	Secretin and TonB N terminus short domain
VN11_RS12230	SM00344	helix_turn_helix ASNC type
VN11_RS12245	SM00091	PAS domain
VN11_RS12280	SM00382	ATPases associated with a variety of cellular activities
VN11_RS12290	SM00382	ATPases associated with a variety of cellular activities
VN11_RS12305	SM00100	Cyclic nucleotide-monophosphate binding domain
VN11_RS12305	SM00419	helix_turn_helix, cAMP Regulatory protein
VN11_RS12340	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VN11_RS12370	SM00852	Probable molybdopterin binding domain
VN11_RS12375	SM00852	Probable molybdopterin binding domain
VN11_RS12380	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS12440	SM00822	VN11_RS12440
VN11_RS12445	SM00823	Phosphopantetheine attachment site
VN11_RS12445	SM00824	Thioesterase
VN11_RS12500	SM00903	Flavin reductase like domain
VN11_RS12505	SM00028	Tetratricopeptide repeats
VN11_RS12535	SM00529	Helix-turn-helix diphteria tox regulatory element
VN11_RS12565	SM00829	Enoylreductase
VN11_RS12595	SM00965	Secretin and TonB N terminus short domain
VN11_RS12635	SM00422	helix_turn_helix, mercury resistance
VN11_RS12660	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS12680	SM00858	VN11_RS12680
VN11_RS12765	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS12775	SM00387	Histidine kinase-like ATPases
VN11_RS12780	SM00421	helix_turn_helix, Lux Regulon
VN11_RS12780	SM00448	cheY-homologous receiver domain
VN11_RS12790	SM00248	ankyrin repeats
VN11_RS12940	SM00382	ATPases associated with a variety of cellular activities
VN11_RS12940	SM01086	C-terminal, D2-small domain, of ClpB protein
VN11_RS13040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS13040	SM00895	VN11_RS13040
VN11_RS13060	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS13065	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
VN11_RS13085	SM01217	VN11_RS13085
VN11_RS13095	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS13130	SM00481	DNA polymerase alpha chain like domain
VN11_RS13140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS13170	SM00965	Secretin and TonB N terminus short domain
VN11_RS13215	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS13220	SM00422	helix_turn_helix, mercury resistance
VN11_RS13270	SM00448	cheY-homologous receiver domain
VN11_RS13285	SM01034	Sensors of blue-light using FAD
VN11_RS13300	SM01034	Sensors of blue-light using FAD
VN11_RS13315	SM00495	Chitin-binding domain type 3
VN11_RS13495	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS13580	SM00267	diguanylate cyclase
VN11_RS13585	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS13585	SM00091	PAS domain
VN11_RS13585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS13625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS13625	SM00387	Histidine kinase-like ATPases
VN11_RS13630	SM00448	cheY-homologous receiver domain
VN11_RS13630	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS13635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VN11_RS13635	SM00091	PAS domain
VN11_RS13635	SM00267	diguanylate cyclase
VN11_RS13640	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS13640	SM00732	Likely ribonuclease with RNase H fold.
VN11_RS13730	SM00479	VN11_RS13730
VN11_RS13780	SM00422	helix_turn_helix, mercury resistance
VN11_RS13825	SM00448	cheY-homologous receiver domain
VN11_RS13825	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS13830	SM00387	Histidine kinase-like ATPases
VN11_RS13830	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS13845	SM00382	ATPases associated with a variety of cellular activities
VN11_RS13855	SM00054	EF-hand, calcium binding motif
VN11_RS13880	SM00829	Enoylreductase
VN11_RS13940	SM00830	Chorismate mutase type II
VN11_RS13950	SM00240	Forkhead associated domain
VN11_RS13975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS13975	SM00866	VN11_RS13975
VN11_RS14060	SM00736	Dystroglycan-type cadherin-like domains.
VN11_RS14075	SM00382	ATPases associated with a variety of cellular activities
VN11_RS14115	SM00829	Enoylreductase
VN11_RS14120	SM00564	beta-propeller repeat
VN11_RS14125	SM00434	DNA Topoisomerase IV
VN11_RS14150	SM00292	breast cancer carboxy-terminal domain
VN11_RS14150	SM00532	Ligase N family
VN11_RS14160	SM01321	VN11_RS14160
VN11_RS14165	SM00771	ZipA, C-terminal domain (FtsZ-binding)
VN11_RS14170	SM00968	SMC proteins Flexible Hinge Domain
VN11_RS14215	SM00947	Carbonic anhydrase
VN11_RS14235	SM00479	VN11_RS14235
VN11_RS14285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VN11_RS14295	SM01018	B12 binding domain
VN11_RS14315	SM00984	UDP binding domain
VN11_RS14335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS14340	SM00382	ATPases associated with a variety of cellular activities
VN11_RS14375	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
VN11_RS14385	SM00861	Transketolase, pyrimidine binding domain
VN11_RS14445	SM00861	Transketolase, pyrimidine binding domain
VN11_RS14490	SM00357	Cold shock protein domain
VN11_RS14540	SM00382	ATPases associated with a variety of cellular activities
VN11_RS14635	SM00363	S4 RNA-binding domain
VN11_RS14640	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS14680	SM00354	helix_turn _helix lactose operon repressor
VN11_RS14705	SM00363	S4 RNA-binding domain
VN11_RS14725	SM00382	ATPases associated with a variety of cellular activities
VN11_RS14780	SM00382	ATPases associated with a variety of cellular activities
VN11_RS14785	SM00382	ATPases associated with a variety of cellular activities
VN11_RS14880	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
VN11_RS14895	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VN11_RS14930	SM00840	VN11_RS14930
VN11_RS14950	SM01234	VN11_RS14950
VN11_RS14985	SM00841	Elongation factor P, C-terminal
VN11_RS14985	SM01185	VN11_RS14985
VN11_RS14995	SM00052	Putative diguanylate phosphodiesterase
VN11_RS14995	SM00267	diguanylate cyclase
VN11_RS14995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS15025	SM00822	VN11_RS15025
VN11_RS15045	SM00853	MutL C terminal dimerisation domain
VN11_RS15045	SM01340	VN11_RS15045
VN11_RS15050	SM00646	VN11_RS15050
VN11_RS15085	SM00474	3'-5' exonuclease
VN11_RS15125	SM00822	VN11_RS15125
VN11_RS15130	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS15135	SM00829	Enoylreductase
VN11_RS15165	SM00507	HNH nucleases
VN11_RS15170	SM00861	Transketolase, pyrimidine binding domain
VN11_RS15185	SM00421	helix_turn_helix, Lux Regulon
VN11_RS15185	SM00448	cheY-homologous receiver domain
VN11_RS15200	SM00960	Roadblock/LC7 domain
VN11_RS15285	SM00422	helix_turn_helix, mercury resistance
VN11_RS15290	SM00411	bacterial (prokaryotic) histone like domain
VN11_RS15295	SM00873	B3/4 domain
VN11_RS15295	SM00874	tRNA synthetase B5 domain
VN11_RS15295	SM00896	Ferredoxin-fold anticodon binding domain
VN11_RS15315	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VN11_RS15345	SM00636	VN11_RS15345
VN11_RS15360	SM00028	Tetratricopeptide repeats
VN11_RS15360	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS15365	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS15365	SM00322	K homology RNA-binding domain
VN11_RS15370	SM01387	VN11_RS15370
VN11_RS15390	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS15390	SM00322	K homology RNA-binding domain
VN11_RS15445	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
VN11_RS15450	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
VN11_RS15595	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VN11_RS15630	SM00257	Lysin motif
VN11_RS15650	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS15770	SM00098	Alkaline phosphatase homologues
VN11_RS15780	SM00977	TilS substrate C-terminal domain
VN11_RS15820	SM00316	Ribosomal protein S1-like RNA-binding domain
VN11_RS15905	SM00257	Lysin motif
VN11_RS15910	SM00267	diguanylate cyclase
VN11_RS15910	SM01080	VN11_RS15910
VN11_RS16005	SM00028	Tetratricopeptide repeats
VN11_RS16070	SM00363	S4 RNA-binding domain
VN11_RS16075	SM00155	Phospholipase D. Active site motifs.
VN11_RS16085	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
VN11_RS16090	SM00869	Autotransporter beta-domain
VN11_RS16125	SM00487	DEAD-like helicases superfamily
VN11_RS16125	SM00490	helicase superfamily c-terminal domain
VN11_RS16145	SM00357	Cold shock protein domain
VN11_RS16170	SM01118	VN11_RS16170
VN11_RS16180	SM00448	cheY-homologous receiver domain
VN11_RS16195	SM00358	Double-stranded RNA binding motif
VN11_RS16195	SM00535	Ribonuclease III family
VN11_RS16210	SM00838	Elongation factor G C-terminus
VN11_RS16215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VN11_RS16280	SM00387	Histidine kinase-like ATPases
VN11_RS16280	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS16285	SM00448	cheY-homologous receiver domain
VN11_RS16285	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS16340	SM00091	PAS domain
VN11_RS16340	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS16350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS16350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS16375	SM00788	Adenylosuccinate synthetase
VN11_RS16385	SM00244	prohibitin homologues
VN11_RS16390	SM00244	prohibitin homologues
VN11_RS16395	SM00829	Enoylreductase
VN11_RS16400	SM00448	cheY-homologous receiver domain
VN11_RS16405	SM00271	DnaJ molecular chaperone homology domain
VN11_RS16425	SM01359	VN11_RS16425
VN11_RS16425	SM01360	VN11_RS16425
VN11_RS16460	SM00382	ATPases associated with a variety of cellular activities
VN11_RS16510	SM00387	Histidine kinase-like ATPases
VN11_RS16510	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS16510	SM00448	cheY-homologous receiver domain
VN11_RS16515	SM00387	Histidine kinase-like ATPases
VN11_RS16515	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS16515	SM00448	cheY-homologous receiver domain
VN11_RS16520	SM00867	YceI-like domain 
VN11_RS16530	SM00867	YceI-like domain 
VN11_RS16585	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS16670	SM00244	prohibitin homologues
VN11_RS16710	SM00260	Two component signalling adaptor domain
VN11_RS16720	SM00073	Histidine Phosphotransfer domain
VN11_RS16720	SM00260	Two component signalling adaptor domain
VN11_RS16720	SM00387	Histidine kinase-like ATPases
VN11_RS16720	SM00448	cheY-homologous receiver domain
VN11_RS16720	SM01231	VN11_RS16720
VN11_RS16725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS16730	SM00260	Two component signalling adaptor domain
VN11_RS16735	SM00448	cheY-homologous receiver domain
VN11_RS16740	SM00448	cheY-homologous receiver domain
VN11_RS16760	SM00491	VN11_RS16760
VN11_RS16790	SM00954	Region found in RelA / SpoT proteins
VN11_RS16800	SM00382	ATPases associated with a variety of cellular activities
VN11_RS16800	SM00487	DEAD-like helicases superfamily
VN11_RS16800	SM00490	helicase superfamily c-terminal domain
VN11_RS16800	SM00847	Helicase associated domain (HA2)  Add an annotation
VN11_RS16810	SM00341	Helicase and RNase D C-terminal
VN11_RS16810	SM00487	DEAD-like helicases superfamily
VN11_RS16810	SM00490	helicase superfamily c-terminal domain
VN11_RS16810	SM00956	VN11_RS16810
VN11_RS16845	SM00448	cheY-homologous receiver domain
VN11_RS16930	SM00382	ATPases associated with a variety of cellular activities
VN11_RS16940	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VN11_RS17000	SM00382	ATPases associated with a variety of cellular activities
VN11_RS17020	SM00448	cheY-homologous receiver domain
VN11_RS17020	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS17025	SM00387	Histidine kinase-like ATPases
VN11_RS17025	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS17035	SM00382	ATPases associated with a variety of cellular activities
VN11_RS17035	SM01086	C-terminal, D2-small domain, of ClpB protein
VN11_RS17050	SM00965	Secretin and TonB N terminus short domain
VN11_RS17150	SM00881	CoA binding domain
VN11_RS17160	SM00387	Histidine kinase-like ATPases
VN11_RS17160	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS17165	SM00382	ATPases associated with a variety of cellular activities
VN11_RS17165	SM00448	cheY-homologous receiver domain
VN11_RS17260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS17260	SM00387	Histidine kinase-like ATPases
VN11_RS17260	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS17265	SM00448	cheY-homologous receiver domain
VN11_RS17265	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS17300	SM00869	Autotransporter beta-domain
VN11_RS17360	SM00967	RNA 2'-O ribose methyltransferase substrate binding
VN11_RS17405	SM00506	Appr-1"-p processing enzyme
VN11_RS17450	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
VN11_RS17465	SM00849	Metallo-beta-lactamase superfamily
VN11_RS17495	SM00903	Flavin reductase like domain
VN11_RS17510	SM00861	Transketolase, pyrimidine binding domain
VN11_RS17525	SM00028	Tetratricopeptide repeats
VN11_RS17525	SM00327	von Willebrand factor (vWF) type A domain
VN11_RS17530	SM00327	von Willebrand factor (vWF) type A domain
VN11_RS17545	SM00382	ATPases associated with a variety of cellular activities
VN11_RS17550	SM00965	Secretin and TonB N terminus short domain
VN11_RS17570	SM00842	Cell division protein FtsA
VN11_RS17640	SM00487	DEAD-like helicases superfamily
VN11_RS17640	SM00490	helicase superfamily c-terminal domain
VN11_RS17650	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VN11_RS17650	SM00954	Region found in RelA / SpoT proteins
VN11_RS17655	SM01409	VN11_RS17655
VN11_RS17660	SM00072	Guanylate kinase homologues.
VN11_RS17665	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VN11_RS17730	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS17750	SM01011	Aminopeptidase P, N-terminal domain
VN11_RS17865	SM00464	Found in ATP-dependent protease La (LON)
VN11_RS17930	SM00965	Secretin and TonB N terminus short domain
VN11_RS17975	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS17980	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS18025	SM00917	LeuA allosteric (dimerisation) domain
VN11_RS18045	SM01329	VN11_RS18045
VN11_RS18125	SM00919	Malic enzyme, NAD binding domain
VN11_RS18125	SM01274	VN11_RS18125
VN11_RS18140	SM00387	Histidine kinase-like ATPases
VN11_RS18140	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS18140	SM00448	cheY-homologous receiver domain
VN11_RS18145	SM00421	helix_turn_helix, Lux Regulon
VN11_RS18145	SM00448	cheY-homologous receiver domain
VN11_RS18155	SM00387	Histidine kinase-like ATPases
VN11_RS18155	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS18160	SM00448	cheY-homologous receiver domain
VN11_RS18160	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS18175	SM00822	VN11_RS18175
VN11_RS18195	SM01154	VN11_RS18195
VN11_RS18215	SM00450	Rhodanese Homology Domain
VN11_RS18285	SM00267	diguanylate cyclase
VN11_RS18295	SM00829	Enoylreductase
VN11_RS18340	SM00829	Enoylreductase
VN11_RS18360	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS18365	SM00849	Metallo-beta-lactamase superfamily
VN11_RS18400	SM00344	helix_turn_helix ASNC type
VN11_RS18505	SM00869	Autotransporter beta-domain
VN11_RS18525	SM00354	helix_turn _helix lactose operon repressor
VN11_RS18575	SM00387	Histidine kinase-like ATPases
VN11_RS18575	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS18575	SM00448	cheY-homologous receiver domain
VN11_RS18580	SM00448	cheY-homologous receiver domain
VN11_RS18585	SM00387	Histidine kinase-like ATPases
VN11_RS18585	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS18590	SM00749	bacterial OsmY and nodulation domain
VN11_RS18600	SM01350	VN11_RS18600
VN11_RS18615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VN11_RS18615	SM00245	tail specific protease
VN11_RS18620	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS18645	SM00936	Penicillin-binding protein 5, C-terminal domain 
VN11_RS18685	SM00268	Actin
VN11_RS18705	SM01263	VN11_RS18705
VN11_RS18760	SM00382	ATPases associated with a variety of cellular activities
VN11_RS18760	SM01086	C-terminal, D2-small domain, of ClpB protein
VN11_RS18825	SM00530	Helix-turn-helix XRE-family like proteins 
VN11_RS18840	SM00382	ATPases associated with a variety of cellular activities
VN11_RS18840	SM00930	VN11_RS18840
VN11_RS18895	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS18910	SM00382	ATPases associated with a variety of cellular activities
VN11_RS18930	SM00382	ATPases associated with a variety of cellular activities
VN11_RS18930	SM00448	cheY-homologous receiver domain
VN11_RS18935	SM00387	Histidine kinase-like ATPases
VN11_RS18960	SM00382	ATPases associated with a variety of cellular activities
VN11_RS19015	SM00986	Uracil DNA glycosylase superfamily
VN11_RS19015	SM00987	UreE urease accessory protein, C-terminal domain 
VN11_RS19060	SM00448	cheY-homologous receiver domain
VN11_RS19060	SM00850	LytTr DNA-binding domain
VN11_RS19085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS19085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS19095	SM00245	tail specific protease
VN11_RS19130	SM00869	Autotransporter beta-domain
VN11_RS19155	SM00528	Domain in histone-like proteins of HNS family
VN11_RS19175	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
VN11_RS19280	SM00257	Lysin motif
VN11_RS19305	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
VN11_RS19305	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
VN11_RS19305	SM00493	VN11_RS19305
VN11_RS19355	SM00487	DEAD-like helicases superfamily
VN11_RS19355	SM00490	helicase superfamily c-terminal domain
VN11_RS19405	SM00347	helix_turn_helix multiple antibiotic resistance protein
VN11_RS19410	SM00387	Histidine kinase-like ATPases
VN11_RS19410	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS19415	SM00448	cheY-homologous receiver domain
VN11_RS19415	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS19435	SM00883	Chaperonin 10 Kd subunit
VN11_RS19465	SM00091	PAS domain
VN11_RS19465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS19465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS19480	SM00421	helix_turn_helix, Lux Regulon
VN11_RS19480	SM00448	cheY-homologous receiver domain
VN11_RS19500	SM00062	Bacterial periplasmic substrate-binding proteins
VN11_RS19515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS19515	SM00866	VN11_RS19515
VN11_RS19545	SM00098	Alkaline phosphatase homologues
VN11_RS19595	SM00878	Biotin carboxylase C-terminal domain
VN11_RS19630	SM00563	Phosphate acyltransferases
VN11_RS19640	SM00195	Dual specificity phosphatase, catalytic domain
VN11_RS19655	SM00798	AICARFT/IMPCHase bienzyme
VN11_RS19655	SM00851	MGS-like domain
VN11_RS19665	SM01209	VN11_RS19665
VN11_RS19665	SM01210	VN11_RS19665
VN11_RS19680	SM00986	Uracil DNA glycosylase superfamily
VN11_RS19680	SM00987	UreE urease accessory protein, C-terminal domain 
VN11_RS19685	SM00448	cheY-homologous receiver domain
VN11_RS19695	SM00382	ATPases associated with a variety of cellular activities
VN11_RS19700	SM00487	DEAD-like helicases superfamily
VN11_RS19700	SM00490	helicase superfamily c-terminal domain
VN11_RS19710	SM00357	Cold shock protein domain
VN11_RS19710	SM00382	ATPases associated with a variety of cellular activities
VN11_RS19710	SM00959	Rho termination factor, N-terminal domain
VN11_RS19720	SM00354	helix_turn _helix lactose operon repressor
VN11_RS19735	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
VN11_RS19740	SM00267	diguanylate cyclase
VN11_RS19760	SM00960	Roadblock/LC7 domain
VN11_RS19790	SM00257	Lysin motif
VN11_RS19830	SM00563	Phosphate acyltransferases
VN11_RS19880	SM00052	Putative diguanylate phosphodiesterase
VN11_RS19880	SM00267	diguanylate cyclase
VN11_RS19880	SM00448	cheY-homologous receiver domain
VN11_RS19885	SM00073	Histidine Phosphotransfer domain
VN11_RS19885	SM00387	Histidine kinase-like ATPases
VN11_RS19885	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS19885	SM00448	cheY-homologous receiver domain
VN11_RS19940	SM00100	Cyclic nucleotide-monophosphate binding domain
VN11_RS19940	SM00419	helix_turn_helix, cAMP Regulatory protein
VN11_RS19980	SM00046	Diacylglycerol kinase catalytic domain (presumed)
VN11_RS19995	SM00271	DnaJ molecular chaperone homology domain
VN11_RS20065	SM00347	helix_turn_helix multiple antibiotic resistance protein
VN11_RS20095	SM00861	Transketolase, pyrimidine binding domain
VN11_RS20100	SM00326	Src homology 3 domains
VN11_RS20120	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VN11_RS20125	SM00267	diguanylate cyclase
VN11_RS20180	SM00448	cheY-homologous receiver domain
VN11_RS20180	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS20185	SM00387	Histidine kinase-like ATPases
VN11_RS20215	SM00938	Nitrogen regulatory protein P-II
VN11_RS20245	SM00382	ATPases associated with a variety of cellular activities
VN11_RS20265	SM00382	ATPases associated with a variety of cellular activities
VN11_RS20330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS20345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VN11_RS20365	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS20365	SM00871	Bacterial transcription activator, effector binding domain
VN11_RS20415	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS20435	SM00776	VN11_RS20435
VN11_RS20455	SM00420	helix_turn_helix, Deoxyribose operon repressor
VN11_RS20455	SM01134	VN11_RS20455
VN11_RS20525	SM00729	Elongator protein 3, MiaB family, Radical SAM
VN11_RS20525	SM00876	Biotin and Thiamin Synthesis associated domain
VN11_RS20565	SM01228	VN11_RS20565
VN11_RS20585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS20585	SM00387	Histidine kinase-like ATPases
VN11_RS20585	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS20590	SM00448	cheY-homologous receiver domain
VN11_RS20590	SM00862	Transcriptional regulatory protein, C terminal
VN11_RS20620	SM00382	ATPases associated with a variety of cellular activities
VN11_RS20650	SM00491	VN11_RS20650
VN11_RS20675	SM01004	Delta-aminolevulinic acid dehydratase
VN11_RS20730	SM00342	helix_turn_helix, arabinose operon control protein
VN11_RS20760	SM00382	ATPases associated with a variety of cellular activities
VN11_RS20770	SM00267	diguanylate cyclase
VN11_RS20930	SM00382	ATPases associated with a variety of cellular activities
VN11_RS20955	SM00487	DEAD-like helicases superfamily
VN11_RS20955	SM00490	helicase superfamily c-terminal domain
VN11_RS20955	SM00847	Helicase associated domain (HA2)  Add an annotation
VN11_RS20990	SM00244	prohibitin homologues
VN11_RS21010	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS21010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VN11_RS21040	SM00881	CoA binding domain
VN11_RS21045	SM00116	Domain in cystathionine beta-synthase and other proteins.
VN11_RS21045	SM00924	MgtE intracellular N domain
VN11_RS21055	SM00248	ankyrin repeats
VN11_RS21130	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
VN11_RS21130	SM00474	3'-5' exonuclease
VN11_RS21130	SM00475	5'-3' exonuclease
VN11_RS21130	SM00482	DNA polymerase A domain
VN11_RS21140	SM00912	haemagglutination activity domain
VN11_RS21170	SM00155	Phospholipase D. Active site motifs.
VN11_RS21185	SM00479	VN11_RS21185
VN11_RS21225	SM01259	VN11_RS21225
VN11_RS21245	SM00470	ParB-like nuclease domain
VN11_RS21305	SM00421	helix_turn_helix, Lux Regulon
VN11_RS21305	SM00448	cheY-homologous receiver domain
VN11_RS21315	SM00091	PAS domain
VN11_RS21315	SM00387	Histidine kinase-like ATPases
VN11_RS21315	SM00388	His Kinase A (phosphoacceptor) domain
VN11_RS21315	SM00448	cheY-homologous receiver domain
VN11_RS21335	SM00836	DALR anticodon binding domain
VN11_RS21345	SM00382	ATPases associated with a variety of cellular activities
VN11_RS21390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VN11_RS21475	SM00267	diguanylate cyclase
VN11_RS21510	SM00347	helix_turn_helix multiple antibiotic resistance protein
VN11_RS21540	SM00382	ATPases associated with a variety of cellular activities
VN11_RS21555	SM00382	ATPases associated with a variety of cellular activities
VN11_RS21605	SM00829	Enoylreductase
VN11_RS21630	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
VN11_RS21655	SM00028	Tetratricopeptide repeats
