locus-tag	class	description
FEO88_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FEO88_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FEO88_RS00020	COG0187	DNA topoisomerase II activity
FEO88_RS00030	COG0501	Belongs to the peptidase M48B family
FEO88_RS00060	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FEO88_RS00085	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FEO88_RS00095	COG4772	TonB-dependent receptor
FEO88_RS00130	COG0800	Aldolase
FEO88_RS00145	COG3186	Phenylalanine-4-hydroxylase
FEO88_RS00150	COG1522	sequence-specific DNA binding
FEO88_RS00160	COG1752	Esterase of the alpha-beta hydrolase superfamily
FEO88_RS00170	COG4771	TonB-dependent receptor
FEO88_RS00175	COG0671	phosphoesterase, PA-phosphatase related
FEO88_RS00190	COG1122	ATPase activity
FEO88_RS00210	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FEO88_RS00215	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
FEO88_RS00225	COG1435	thymidine kinase activity
FEO88_RS00230	COG0210	DNA helicase
FEO88_RS00240	COG3132	Protein of unknown function, DUF480
FEO88_RS00245	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FEO88_RS00250	COG0284	orotidine-5'-phosphate decarboxylase activity
FEO88_RS00260	COG2937	Belongs to the GPAT DAPAT family
FEO88_RS00270	COG0037	tRNA processing
FEO88_RS00275	COG2974	May be involved in recombination
FEO88_RS00290	COG1803	Methylglyoxal synthase
FEO88_RS00295	COG2205	protein histidine kinase activity
FEO88_RS00295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FEO88_RS00300	COG0493	'glutamate synthase
FEO88_RS00305	COG0070	glutamate synthase
FEO88_RS00305	COG0069	glutamate synthase activity
FEO88_RS00305	COG0067	glutamate synthase
FEO88_RS00325	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS00330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEO88_RS00345	COG2814	Major facilitator Superfamily
FEO88_RS00375	COG1205	dead DEAH box helicase
FEO88_RS00375	COG1111	helicase
FEO88_RS00410	COG0714	Associated with various cellular activities
FEO88_RS00430	COG0312	modulator of DNA gyrase
FEO88_RS00440	COG3550	peptidyl-serine autophosphorylation
FEO88_RS00465	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FEO88_RS00485	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FEO88_RS00520	COG1968	undecaprenyl-diphosphatase activity
FEO88_RS00525	COG0174	glutamine synthetase
FEO88_RS00530	COG0347	Belongs to the P(II) protein family
FEO88_RS00535	COG0004	ammonium transporteR
FEO88_RS00545	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FEO88_RS00560	COG3852	Histidine kinase
FEO88_RS00565	COG2204	response regulator
FEO88_RS00570	COG2032	superoxide dismutase activity
FEO88_RS00575	COG2032	superoxide dismutase activity
FEO88_RS00585	COG0183	Belongs to the thiolase family
FEO88_RS00620	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FEO88_RS00625	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FEO88_RS00640	COG3550	peptidyl-serine autophosphorylation
FEO88_RS00680	COG2837	iron assimilation
FEO88_RS00720	COG2197	response regulator
FEO88_RS00730	COG3474	cytochrome
FEO88_RS00740	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS00745	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FEO88_RS00755	COG0612	Peptidase, M16
FEO88_RS00765	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FEO88_RS00770	COG0596	Alpha beta hydrolase
FEO88_RS00785	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FEO88_RS00795	COG1181	Belongs to the D-alanine--D-alanine ligase family
FEO88_RS00805	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FEO88_RS00835	COG0339	signal peptide processing
FEO88_RS00850	COG0681	Belongs to the peptidase S26 family
FEO88_RS00855	COG2814	Major facilitator Superfamily
FEO88_RS00860	COG0583	DNA-binding transcription factor activity
FEO88_RS00865	COG0583	DNA-binding transcription factor activity
FEO88_RS00870	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FEO88_RS00875	COG2224	Isocitrate lyase
FEO88_RS00880	COG3706	GGDEF domain
FEO88_RS00925	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS00945	COG0697	spore germination
FEO88_RS00955	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FEO88_RS00970	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEO88_RS00975	COG1280	lysine exporter protein (LysE YggA)
FEO88_RS00980	COG1607	acyl-coa hydrolase
FEO88_RS00985	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FEO88_RS00990	COG1902	pentaerythritol trinitrate reductase activity
FEO88_RS01005	COG1335	isochorismatase
FEO88_RS01010	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FEO88_RS01015	COG1752	Esterase of the alpha-beta hydrolase superfamily
FEO88_RS01025	COG3800	Transcriptional regulator
FEO88_RS01025	COG1396	sequence-specific DNA binding
FEO88_RS01035	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS01040	COG1024	Enoyl-CoA hydratase
FEO88_RS01045	COG1024	Enoyl-CoA hydratase
FEO88_RS01055	COG1764	response to oxidative stress
FEO88_RS01065	COG0659	secondary active sulfate transmembrane transporter activity
FEO88_RS01075	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FEO88_RS01095	COG3228	Belongs to the MtfA family
FEO88_RS01105	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FEO88_RS01105	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FEO88_RS01110	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FEO88_RS01140	COG3657	addiction module killer protein
FEO88_RS01185	COG3237	CsbD-like
FEO88_RS01195	COG0180	Tryptophanyl-tRNA synthetase
FEO88_RS01220	COG0477	Major facilitator Superfamily
FEO88_RS01225	COG0697	spore germination
FEO88_RS01240	COG0577	efflux transmembrane transporter activity
FEO88_RS01240	COG1136	(ABC) transporter
FEO88_RS01250	COG1136	(ABC) transporter
FEO88_RS01270	COG4585	Histidine kinase
FEO88_RS01275	COG2197	response regulator
FEO88_RS01290	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FEO88_RS01300	COG0628	permease
FEO88_RS01320	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FEO88_RS01335	COG5507	3-demethylubiquinone-9 3-methyltransferase
FEO88_RS01350	COG2197	response regulator
FEO88_RS01365	COG2814	Major facilitator Superfamily
FEO88_RS01370	COG0583	DNA-binding transcription factor activity
FEO88_RS01375	COG4807	Protein conserved in bacteria
FEO88_RS01380	COG4221	oxidoreductase activity
FEO88_RS01390	COG0018	arginyl-trna synthetase
FEO88_RS01395	COG2003	Belongs to the UPF0758 family
FEO88_RS01400	COG2197	response regulator
FEO88_RS01405	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FEO88_RS01410	COG0756	dUTP diphosphatase activity
FEO88_RS01425	COG2205	protein histidine kinase activity
FEO88_RS01435	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FEO88_RS01440	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FEO88_RS01455	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FEO88_RS01460	COG0708	Exodeoxyribonuclease III
FEO88_RS01465	COG2223	nitrite transmembrane transporter activity
FEO88_RS01480	COG0739	heme binding
FEO88_RS01545	COG2234	aminopeptidase activity
FEO88_RS01555	COG4942	peptidase
FEO88_RS01560	COG0793	Belongs to the peptidase S41A family
FEO88_RS01600	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FEO88_RS01645	COG0109	protoheme IX farnesyltransferase activity
FEO88_RS01675	COG1295	ribonuclease BN
FEO88_RS01690	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FEO88_RS01700	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FEO88_RS01705	COG0668	transmembrane transport
FEO88_RS01720	COG2133	pyrroloquinoline quinone binding
FEO88_RS01725	COG4682	membrane
FEO88_RS01735	COG0531	amino acid
FEO88_RS01745	COG1737	Transcriptional regulator
FEO88_RS01750	COG4948	Mandelate Racemase Muconate Lactonizing
FEO88_RS01800	COG5383	Protein conserved in bacteria
FEO88_RS01810	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FEO88_RS01815	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FEO88_RS01845	COG0778	Nitroreductase
FEO88_RS01850	COG2353	YceI-like domain
FEO88_RS01860	COG2375	cellular response to nickel ion
FEO88_RS01905	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FEO88_RS01970	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FEO88_RS02015	COG2267	carboxylic ester hydrolase activity
FEO88_RS02080	COG0583	DNA-binding transcription factor activity
FEO88_RS02090	COG2814	Major facilitator Superfamily
FEO88_RS02095	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FEO88_RS02100	COG1113	amino acid transport
FEO88_RS02105	COG0741	lytic transglycosylase activity
FEO88_RS02130	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FEO88_RS02140	COG5507	3-demethylubiquinone-9 3-methyltransferase
FEO88_RS02145	COG4941	Belongs to the sigma-70 factor family
FEO88_RS02175	COG3275	phosphorelay sensor kinase activity
FEO88_RS02180	COG3279	Response regulator of the LytR AlgR family
FEO88_RS02200	COG1309	transcriptional regulator
FEO88_RS02210	COG2814	Major facilitator Superfamily
FEO88_RS02215	COG3590	peptidase
FEO88_RS02225	COG0583	DNA-binding transcription factor activity
FEO88_RS02235	COG3384	dioxygenase
FEO88_RS02240	COG0025	NhaP-type Na H and K H
FEO88_RS02265	COG1360	Flagellar Motor Protein
FEO88_RS02295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FEO88_RS02310	COG2205	protein histidine kinase activity
FEO88_RS02310	COG0784	Response regulator, receiver
FEO88_RS02325	COG2813	Specifically methylates the guanine in position
FEO88_RS02330	COG1187	pseudouridine synthase activity
FEO88_RS02335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FEO88_RS02345	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FEO88_RS02350	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FEO88_RS02365	COG0583	DNA-binding transcription factor activity
FEO88_RS02370	COG2226	methyltransferase
FEO88_RS02400	COG1956	GAF domain-containing protein
FEO88_RS02405	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FEO88_RS02410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEO88_RS02415	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FEO88_RS02420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FEO88_RS02420	COG0785	Cytochrome C biogenesis protein
FEO88_RS02425	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FEO88_RS02430	COG0745	RESPONSE REGULATOR receiver
FEO88_RS02435	COG5002	protein histidine kinase activity
FEO88_RS02440	COG2205	protein histidine kinase activity
FEO88_RS02445	COG0745	RESPONSE REGULATOR receiver
FEO88_RS02450	COG0367	asparagine synthase
FEO88_RS02460	COG0720	synthase
FEO88_RS02475	COG0513	Belongs to the DEAD box helicase family
FEO88_RS02485	COG0625	glutathione transferase activity
FEO88_RS02490	COG1573	uracil-dna glycosylase
FEO88_RS02525	COG0626	cystathionine gamma-synthase activity
FEO88_RS02540	COG4106	trans-aconitate 2-methyltransferase activity
FEO88_RS02575	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FEO88_RS02585	COG0463	Glycosyl transferase, family 2
FEO88_RS02635	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FEO88_RS02675	COG1127	ABC transporter
FEO88_RS02680	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FEO88_RS02695	COG0442	prolyl-tRNA aminoacylation
FEO88_RS02705	COG1183	phosphatidylcholine synthase activity
FEO88_RS02715	COG0456	acetyltransferase
FEO88_RS02725	COG0525	valine-tRNA ligase activity
FEO88_RS02740	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FEO88_RS02750	COG0795	lipopolysaccharide-transporting ATPase activity
FEO88_RS02765	COG4974	Belongs to the 'phage' integrase family
FEO88_RS02780	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FEO88_RS02780	COG0047	phosphoribosylformylglycinamidine synthase activity
FEO88_RS02785	COG5295	Hep Hag repeat protein
FEO88_RS02790	COG1404	Belongs to the peptidase S8 family
FEO88_RS02795	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FEO88_RS02800	COG1459	type II secretion system
FEO88_RS02805	COG2165	general secretion pathway protein
FEO88_RS02810	COG4970	Tfp pilus assembly protein FimT
FEO88_RS02815	COG2165	general secretion pathway protein
FEO88_RS02820	COG4795	General secretion pathway protein
FEO88_RS02825	COG3156	type II secretion system protein K
FEO88_RS02830	COG3166	PFAM Fimbrial assembly family protein
FEO88_RS02855	COG0463	Glycosyl transferase, family 2
FEO88_RS02870	COG3539	Fimbrial protein
FEO88_RS02875	COG3121	Chaperone
FEO88_RS02890	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FEO88_RS02900	COG1215	transferase activity, transferring glycosyl groups
FEO88_RS02915	COG2252	PERMEase
FEO88_RS02920	COG0488	(ABC) transporter
FEO88_RS02930	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FEO88_RS02945	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FEO88_RS02950	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FEO88_RS02950	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FEO88_RS02980	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FEO88_RS03000	COG0277	FAD linked oxidase domain protein
FEO88_RS03005	COG1988	membrane-bound metal-dependent
FEO88_RS03040	COG2001	Belongs to the MraZ family
FEO88_RS03045	COG0275	rRNA processing
FEO88_RS03050	COG3116	cell division
FEO88_RS03065	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FEO88_RS03085	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FEO88_RS03095	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FEO88_RS03105	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FEO88_RS03110	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FEO88_RS03120	COG0739	heme binding
FEO88_RS03125	COG0653	protein targeting
FEO88_RS03130	COG0494	nUDIX hydrolase
FEO88_RS03140	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FEO88_RS03150	COG3275	phosphorelay sensor kinase activity
FEO88_RS03155	COG3279	Response regulator of the LytR AlgR family
FEO88_RS03160	COG3850	Histidine kinase
FEO88_RS03160	COG5002	protein histidine kinase activity
FEO88_RS03165	COG0745	RESPONSE REGULATOR receiver
FEO88_RS03190	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FEO88_RS03195	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FEO88_RS03205	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FEO88_RS03210	COG1607	acyl-coa hydrolase
FEO88_RS03215	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FEO88_RS03235	COG4106	trans-aconitate 2-methyltransferase activity
FEO88_RS03240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FEO88_RS03250	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FEO88_RS03255	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FEO88_RS03260	COG0667	Aldo Keto reductase
FEO88_RS03270	COG4771	TonB-dependent receptor
FEO88_RS03300	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FEO88_RS03305	COG4181	ATPase activity
FEO88_RS03320	COG0642	Histidine kinase
FEO88_RS03330	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FEO88_RS03335	COG0861	Integral membrane protein TerC family
FEO88_RS03340	COG2814	Major facilitator Superfamily
FEO88_RS03345	COG1704	LemA family
FEO88_RS03360	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FEO88_RS03365	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FEO88_RS03375	COG3738	Protein conserved in bacteria
FEO88_RS03380	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FEO88_RS03385	COG2967	ApaG domain
FEO88_RS03390	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FEO88_RS03395	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FEO88_RS03400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FEO88_RS03405	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FEO88_RS03415	COG2096	Adenosyltransferase
FEO88_RS03425	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FEO88_RS03430	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FEO88_RS03435	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FEO88_RS03440	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
FEO88_RS03460	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FEO88_RS03470	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FEO88_RS03480	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FEO88_RS03485	COG0583	DNA-binding transcription factor activity
FEO88_RS03490	COG3634	alkyl hydroperoxide reductase activity
FEO88_RS03510	COG0583	DNA-binding transcription factor activity
FEO88_RS03545	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FEO88_RS03570	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FEO88_RS03585	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FEO88_RS03605	COG1404	Belongs to the peptidase S8 family
FEO88_RS03625	COG1295	ribonuclease BN
FEO88_RS03630	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FEO88_RS03645	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FEO88_RS03650	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FEO88_RS03665	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FEO88_RS03675	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FEO88_RS03680	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FEO88_RS03685	COG0193	aminoacyl-tRNA hydrolase activity
FEO88_RS03690	COG0012	GTP binding
FEO88_RS03700	COG4242	Belongs to the peptidase S51 family
FEO88_RS03725	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FEO88_RS03740	COG0250	Participates in transcription elongation, termination and antitermination
FEO88_RS03745	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FEO88_RS03750	COG0081	regulation of translation
FEO88_RS03755	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FEO88_RS03760	COG0222	ribosome binding
FEO88_RS03765	COG0085	RNA polymerase activity
FEO88_RS03770	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FEO88_RS03775	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FEO88_RS03780	COG0049	tRNA binding
FEO88_RS03785	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FEO88_RS03790	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FEO88_RS03795	COG0051	transcription antitermination factor activity, RNA binding
FEO88_RS03800	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FEO88_RS03805	COG0088	Forms part of the polypeptide exit tunnel
FEO88_RS03810	COG0089	rRNA binding
FEO88_RS03815	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FEO88_RS03820	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FEO88_RS03825	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FEO88_RS03830	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FEO88_RS03835	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FEO88_RS03840	COG0255	Belongs to the universal ribosomal protein uL29 family
FEO88_RS03845	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FEO88_RS03850	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FEO88_RS03855	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FEO88_RS03860	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FEO88_RS03865	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FEO88_RS03870	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FEO88_RS03875	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FEO88_RS03880	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FEO88_RS03885	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FEO88_RS03890	COG1841	ribosomal large subunit assembly
FEO88_RS03895	COG0200	Binds to the 23S rRNA
FEO88_RS03900	COG0201	protein transport
FEO88_RS03905	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FEO88_RS03910	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FEO88_RS03915	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FEO88_RS03920	COG0202	RNA polymerase activity
FEO88_RS03925	COG0203	ribosomal protein L17
FEO88_RS03940	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
FEO88_RS03950	COG0154	amidase activity
FEO88_RS03965	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FEO88_RS03970	COG0039	L-malate dehydrogenase activity
FEO88_RS03975	COG0564	pseudouridine synthase activity
FEO88_RS03980	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FEO88_RS03995	COG0625	glutathione transferase activity
FEO88_RS04005	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEO88_RS04005	COG1902	pentaerythritol trinitrate reductase activity
FEO88_RS04010	COG2364	Membrane
FEO88_RS04015	COG0604	alcohol dehydrogenase
FEO88_RS04030	COG1187	pseudouridine synthase activity
FEO88_RS04055	COG1063	alcohol dehydrogenase
FEO88_RS04065	COG0588	phosphoglycerate mutase activity
FEO88_RS04070	COG0285	dihydrofolate synthase activity
FEO88_RS04090	COG2833	Protein of unknown function (DUF455)
FEO88_RS04100	COG3291	Pkd domain containing protein
FEO88_RS04105	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FEO88_RS04110	COG0671	phosphoesterase, PA-phosphatase related
FEO88_RS04115	COG0438	transferase activity, transferring glycosyl groups
FEO88_RS04125	COG4206	TonB-dependent receptor
FEO88_RS04130	COG0248	Ppx GppA phosphatase
FEO88_RS04135	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FEO88_RS04150	COG4783	chaperone-mediated protein folding
FEO88_RS04165	COG0473	3-isopropylmalate dehydrogenase activity
FEO88_RS04245	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FEO88_RS04285	COG0592	DNA-directed DNA polymerase activity
FEO88_RS04305	COG2204	response regulator
FEO88_RS04465	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FEO88_RS04465	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FEO88_RS04530	COG0544	peptidyl-prolyl cis-trans isomerase activity
FEO88_RS04535	COG0740	serine-type endopeptidase activity
FEO88_RS04540	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FEO88_RS04580	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FEO88_RS04585	COG1388	LysM domain
FEO88_RS04585	COG3942	CHAP domain
FEO88_RS04590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FEO88_RS04600	COG0328	RNA-DNA hybrid ribonuclease activity
FEO88_RS04605	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FEO88_RS04610	COG0631	protein serine/threonine phosphatase activity
FEO88_RS04630	COG0859	PFAM glycosyl transferase family 9
FEO88_RS04635	COG3642	lipopolysaccharide core region biosynthetic process
FEO88_RS04640	COG1234	tRNA 3'-trailer cleavage
FEO88_RS04655	COG2076	Multidrug Resistance protein
FEO88_RS04675	COG0582	viral genome integration into host DNA
FEO88_RS04685	COG0514	ATP-dependent DNA helicase (RecQ)
FEO88_RS04715	COG2003	Belongs to the UPF0758 family
FEO88_RS04745	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FEO88_RS04780	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FEO88_RS04785	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FEO88_RS04795	COG0537	adenosine 5'-monophosphoramidase activity
FEO88_RS04815	COG0714	Associated with various cellular activities
FEO88_RS04830	COG1399	metal-binding, possibly nucleic acid-binding protein
FEO88_RS04835	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FEO88_RS04840	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FEO88_RS04850	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FEO88_RS04855	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS04865	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FEO88_RS04870	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FEO88_RS04875	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FEO88_RS04880	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FEO88_RS04930	COG4774	siderophore transport
FEO88_RS04940	COG2223	nitrite transmembrane transporter activity
FEO88_RS04965	COG0583	DNA-binding transcription factor activity
FEO88_RS04970	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEO88_RS04975	COG0697	spore germination
FEO88_RS04980	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS04985	COG0583	DNA-binding transcription factor activity
FEO88_RS04990	COG0583	DNA-binding transcription factor activity
FEO88_RS04995	COG0477	Major facilitator Superfamily
FEO88_RS05005	COG2205	protein histidine kinase activity
FEO88_RS05055	COG0583	DNA-binding transcription factor activity
FEO88_RS05065	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FEO88_RS05080	COG0667	Aldo Keto reductase
FEO88_RS05095	COG0456	acetyltransferase
FEO88_RS05105	COG0519	Catalyzes the synthesis of GMP from XMP
FEO88_RS05110	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FEO88_RS05115	COG1678	Uncharacterized ACR, COG1678
FEO88_RS05120	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FEO88_RS05125	COG0540	Belongs to the ATCase OTCase family
FEO88_RS05145	COG2239	Acts as a magnesium transporter
FEO88_RS05150	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FEO88_RS05165	COG1660	Displays ATPase and GTPase activities
FEO88_RS05170	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FEO88_RS05175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEO88_RS05180	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FEO88_RS05190	COG1137	ATPase activity
FEO88_RS05205	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FEO88_RS05220	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FEO88_RS05240	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FEO88_RS05260	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FEO88_RS05270	COG0628	permease
FEO88_RS05285	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FEO88_RS05295	COG2261	transglycosylase associated protein
FEO88_RS05305	COG1555	photosystem II stabilization
FEO88_RS05330	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FEO88_RS05335	COG4804	nuclease activity
FEO88_RS05355	COG0582	viral genome integration into host DNA
FEO88_RS05375	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FEO88_RS05400	COG4771	TonB-dependent receptor
FEO88_RS05410	COG3128	pkhd-type hydroxylase
FEO88_RS05420	COG4774	siderophore transport
FEO88_RS05430	COG2146	nitrite reductase [NAD(P)H] activity
FEO88_RS05445	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FEO88_RS05450	COG0719	Fe-S assembly protein
FEO88_RS05455	COG0396	ATPase activity
FEO88_RS05460	COG0719	Fe-S assembly protein
FEO88_RS05465	COG1959	2 iron, 2 sulfur cluster binding
FEO88_RS05495	COG1764	response to oxidative stress
FEO88_RS05500	COG0384	phenazine biosynthesis protein PhzF
FEO88_RS05505	COG0384	phenazine biosynthesis protein PhzF
FEO88_RS05510	COG0527	aspartate kinase activity
FEO88_RS05535	COG0142	geranyltranstransferase activity
FEO88_RS05540	COG0366	Alpha amylase catalytic
FEO88_RS05550	COG1082	Xylose isomerase domain protein TIM barrel
FEO88_RS05560	COG2211	Major facilitator Superfamily
FEO88_RS05560	COG2190	(PTS) system
FEO88_RS05600	COG1131	(ABC) transporter
FEO88_RS05615	COG0629	single-stranded DNA binding
FEO88_RS05640	COG2010	Cytochrome c
FEO88_RS05650	COG0673	inositol 2-dehydrogenase activity
FEO88_RS05655	COG2211	Major facilitator Superfamily
FEO88_RS05665	COG1609	Transcriptional regulator
FEO88_RS05675	COG0583	DNA-binding transcription factor activity
FEO88_RS05715	COG3655	Transcriptional regulator
FEO88_RS05720	COG1253	flavin adenine dinucleotide binding
FEO88_RS05725	COG1408	metallophosphoesterase
FEO88_RS05740	COG0477	Major facilitator Superfamily
FEO88_RS05755	COG1802	Transcriptional regulator
FEO88_RS05790	COG3052	prosthetic group binding
FEO88_RS05805	COG0579	oxidoreductase
FEO88_RS05830	COG3104	oligopeptide transport
FEO88_RS05840	COG1297	OPT oligopeptide transporter protein
FEO88_RS05845	COG1506	peptidase
FEO88_RS05845	COG0823	Involved in the tonB-independent uptake of proteins
FEO88_RS05860	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FEO88_RS05865	COG2894	cell division
FEO88_RS05880	COG4585	Histidine kinase
FEO88_RS05885	COG2197	response regulator
FEO88_RS05925	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FEO88_RS05940	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FEO88_RS05950	COG1595	DNA-templated transcription, initiation
FEO88_RS05965	COG1946	Acyl-CoA thioesterase
FEO88_RS05985	COG0824	Thioesterase
FEO88_RS05990	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FEO88_RS05995	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FEO88_RS06000	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FEO88_RS06005	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FEO88_RS06010	COG0268	Binds directly to 16S ribosomal RNA
FEO88_RS06015	COG0728	peptidoglycan biosynthetic process
FEO88_RS06020	COG0196	riboflavin kinase activity
FEO88_RS06025	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FEO88_RS06035	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FEO88_RS06060	COG4206	TonB-dependent receptor
FEO88_RS06080	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FEO88_RS06105	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FEO88_RS06110	COG1845	cytochrome c oxidase, subunit III
FEO88_RS06115	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FEO88_RS06130	COG0326	Molecular chaperone. Has ATPase activity
FEO88_RS06150	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FEO88_RS06165	COG0228	four-way junction DNA binding
FEO88_RS06170	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FEO88_RS06175	COG0336	Belongs to the RNA methyltransferase TrmD family
FEO88_RS06180	COG0335	large ribosomal subunit rRNA binding
FEO88_RS06200	COG0534	Mate efflux family protein
FEO88_RS06225	COG0753	catalase activity
FEO88_RS06230	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FEO88_RS06250	COG0840	transmembrane signaling receptor activity
FEO88_RS06270	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FEO88_RS06300	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FEO88_RS06310	COG1475	DNA binding
FEO88_RS06320	COG5489	Protein of unknown function (DUF736)
FEO88_RS06370	COG4959	Type IV secretory pathway protease TraF
FEO88_RS06380	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FEO88_RS06390	COG2814	Major facilitator Superfamily
FEO88_RS06415	COG0640	Transcriptional regulator
FEO88_RS06420	COG1230	cation diffusion facilitator family transporter
FEO88_RS06425	COG1937	Protein conserved in bacteria
FEO88_RS06430	COG2814	Major facilitator Superfamily
FEO88_RS06435	COG0640	Transcriptional regulator
FEO88_RS06445	COG0789	Transcriptional regulator
FEO88_RS06450	COG0633	Ferredoxin
FEO88_RS06475	COG0583	DNA-binding transcription factor activity
FEO88_RS06500	COG4962	Type ii secretion system protein e
FEO88_RS06505	COG3838	Conjugal transfer protein Trbc
FEO88_RS06515	COG3451	type IV secretory pathway VirB4
FEO88_RS06530	COG3846	protein secretion by the type IV secretion system
FEO88_RS06565	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS06590	COG0024	Methionine aminopeptidase
FEO88_RS06615	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FEO88_RS06640	COG1647	Serine aminopeptidase, S33
FEO88_RS06665	COG2814	Major facilitator Superfamily
FEO88_RS06670	COG3706	GGDEF domain
FEO88_RS06690	COG0588	phosphoglycerate mutase activity
FEO88_RS06695	COG3590	peptidase
FEO88_RS06705	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FEO88_RS06715	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FEO88_RS06720	COG0745	RESPONSE REGULATOR receiver
FEO88_RS06725	COG2205	protein histidine kinase activity
FEO88_RS06730	COG4452	Inner membrane protein CreD
FEO88_RS06745	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FEO88_RS06750	COG0735	belongs to the Fur family
FEO88_RS06795	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FEO88_RS06835	COG5002	protein histidine kinase activity
FEO88_RS06835	COG5001	Diguanylate cyclase
FEO88_RS06840	COG2199	diguanylate cyclase activity
FEO88_RS06845	COG1187	pseudouridine synthase activity
FEO88_RS06855	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FEO88_RS06875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEO88_RS06880	COG1132	(ABC) transporter
FEO88_RS06935	COG1695	Transcriptional regulator
FEO88_RS06955	COG1981	membrane
FEO88_RS06960	COG0825	malonyl-CoA metabolic process
FEO88_RS06985	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FEO88_RS06995	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FEO88_RS07000	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FEO88_RS07005	COG0750	zinc metalloprotease
FEO88_RS07010	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FEO88_RS07015	COG0575	Belongs to the CDS family
FEO88_RS07020	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FEO88_RS07025	COG0233	cytoplasmic translational termination
FEO88_RS07030	COG0528	UMP kinase activity
FEO88_RS07040	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FEO88_RS07045	COG0052	Belongs to the universal ribosomal protein uS2 family
FEO88_RS07065	COG3188	usher protein
FEO88_RS07085	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FEO88_RS07100	COG1393	Belongs to the ArsC family
FEO88_RS07105	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FEO88_RS07115	COG0367	asparagine synthase
FEO88_RS07120	COG0475	glutathione-regulated potassium exporter activity
FEO88_RS07155	COG1566	PFAM secretion protein HlyD family protein
FEO88_RS07160	COG2814	Major facilitator Superfamily
FEO88_RS07175	COG0583	DNA-binding transcription factor activity
FEO88_RS07195	COG0557	exoribonuclease II activity
FEO88_RS07205	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FEO88_RS07210	COG1538	Outer membrane efflux protein
FEO88_RS07215	COG0577	efflux transmembrane transporter activity
FEO88_RS07215	COG1136	(ABC) transporter
FEO88_RS07220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS07230	COG2205	protein histidine kinase activity
FEO88_RS07240	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FEO88_RS07245	COG2259	Doxx family
FEO88_RS07255	COG3220	belongs to the UPF0276 family
FEO88_RS07265	COG0704	Plays a role in the regulation of phosphate uptake
FEO88_RS07275	COG0581	inorganic phosphate transmembrane transporter activity
FEO88_RS07280	COG0573	inorganic phosphate transmembrane transporter activity
FEO88_RS07285	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FEO88_RS07290	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FEO88_RS07300	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FEO88_RS07310	COG1024	Enoyl-CoA hydratase
FEO88_RS07340	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FEO88_RS07340	COG0116	Belongs to the methyltransferase superfamily
FEO88_RS07365	COG2733	membrane
FEO88_RS07375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FEO88_RS07380	COG1012	belongs to the aldehyde dehydrogenase family
FEO88_RS07390	COG0477	Major facilitator Superfamily
FEO88_RS07395	COG2703	oxygen carrier activity
FEO88_RS07420	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FEO88_RS07430	COG0174	glutamine synthetase
FEO88_RS07440	COG2072	flavoprotein involved in K transport
FEO88_RS07445	COG3842	ATPase activity
FEO88_RS07450	COG1176	ABC-type spermidine putrescine transport system, permease component I
FEO88_RS07455	COG1177	transmembrane transport
FEO88_RS07460	COG1012	belongs to the aldehyde dehydrogenase family
FEO88_RS07475	COG4535	Mg2 and Co2 transporter CorC
FEO88_RS07490	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FEO88_RS07495	COG1702	phosphate starvation-inducible protein PhoH
FEO88_RS07505	COG1131	(ABC) transporter
FEO88_RS07510	COG0842	Transport permease protein
FEO88_RS07515	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FEO88_RS07530	COG0741	lytic transglycosylase activity
FEO88_RS07535	COG0723	plastoquinol--plastocyanin reductase activity
FEO88_RS07540	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FEO88_RS07545	COG2857	Cytochrome c1
FEO88_RS07550	COG0625	glutathione transferase activity
FEO88_RS07555	COG2969	positive regulation of protein catabolic process
FEO88_RS07590	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FEO88_RS07600	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FEO88_RS07615	COG1611	Belongs to the LOG family
FEO88_RS07660	COG0556	nucleotide-excision repair
FEO88_RS07685	COG3713	MltA-interacting MipA family protein
FEO88_RS07705	COG0811	peptide transport
FEO88_RS07710	COG0848	biopolymer transport protein
FEO88_RS07720	COG1663	tetraacyldisaccharide 4'-kinase activity
FEO88_RS07725	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FEO88_RS07730	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FEO88_RS07740	COG0322	excinuclease ABC activity
FEO88_RS07780	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FEO88_RS07820	COG0577	efflux transmembrane transporter activity
FEO88_RS07820	COG1136	(ABC) transporter
FEO88_RS07865	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FEO88_RS07905	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FEO88_RS07925	COG0348	domain, Protein
FEO88_RS07940	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FEO88_RS07955	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FEO88_RS07960	COG0069	glutamate synthase activity
FEO88_RS07990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FEO88_RS08015	COG0306	phosphate transporter
FEO88_RS08025	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FEO88_RS08040	COG0504	CTP synthase activity
FEO88_RS08045	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FEO88_RS08060	COG0148	phosphopyruvate hydratase activity
FEO88_RS08065	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FEO88_RS08070	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FEO88_RS08075	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FEO88_RS08085	COG2840	Smr protein MutS2
FEO88_RS08090	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FEO88_RS08095	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FEO88_RS08120	COG1534	Rna-binding protein
FEO88_RS08125	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FEO88_RS08130	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FEO88_RS08140	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FEO88_RS08145	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FEO88_RS08150	COG1923	regulation of RNA biosynthetic process
FEO88_RS08155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FEO88_RS08160	COG1546	Belongs to the CinA family
FEO88_RS08165	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FEO88_RS08170	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FEO88_RS08175	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FEO88_RS08180	COG2137	regulation of response to DNA damage stimulus
FEO88_RS08190	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FEO88_RS08365	COG4626	Terminase
FEO88_RS08365	COG1802	Transcriptional regulator
FEO88_RS08485	COG0582	viral genome integration into host DNA
FEO88_RS08510	COG1136	(ABC) transporter
FEO88_RS08515	COG1136	(ABC) transporter
FEO88_RS08515	COG0577	efflux transmembrane transporter activity
FEO88_RS08530	COG1122	ATPase activity
FEO88_RS08555	COG4773	Receptor
FEO88_RS08570	COG1940	carbohydrate kinase activity
FEO88_RS08610	COG3540	Alkaline phosphatase
FEO88_RS08630	COG3258	Cytochrome c
FEO88_RS08645	COG2223	nitrite transmembrane transporter activity
FEO88_RS08660	COG1741	Belongs to the pirin family
FEO88_RS08665	COG0583	DNA-binding transcription factor activity
FEO88_RS08690	COG0352	thiamine-phosphate diphosphorylase activity
FEO88_RS08690	COG0351	phosphomethylpyrimidine kinase
FEO88_RS08705	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FEO88_RS08710	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FEO88_RS08720	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FEO88_RS08730	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FEO88_RS08735	COG0477	Major facilitator Superfamily
FEO88_RS08745	COG0617	tRNA 3'-terminal CCA addition
FEO88_RS08755	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FEO88_RS08770	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FEO88_RS08775	COG0166	Belongs to the GPI family
FEO88_RS08790	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FEO88_RS08800	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FEO88_RS08805	COG0671	phosphoesterase, PA-phosphatase related
FEO88_RS08815	COG0800	Aldolase
FEO88_RS08820	COG0129	dihydroxy-acid dehydratase activity
FEO88_RS08830	COG0837	glucose binding
FEO88_RS08855	COG2009	succinate dehydrogenase
FEO88_RS08860	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FEO88_RS08865	COG1053	succinate dehydrogenase
FEO88_RS08885	COG4591	ABC-type transport system involved in lipoprotein release permease component
FEO88_RS08900	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FEO88_RS08910	COG0552	protein localization to endoplasmic reticulum
FEO88_RS08930	COG0742	ribosomal rna small subunit methyltransferase
FEO88_RS08935	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FEO88_RS08945	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FEO88_RS08950	COG0405	Gamma-glutamyltransferase
FEO88_RS08955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FEO88_RS08965	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FEO88_RS08985	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FEO88_RS08995	COG0415	Belongs to the DNA photolyase family
FEO88_RS09000	COG2885	chlorophyll binding
FEO88_RS09005	COG0583	DNA-binding transcription factor activity
FEO88_RS09105	COG1404	Belongs to the peptidase S8 family
FEO88_RS09185	COG2974	May be involved in recombination
FEO88_RS09520	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FEO88_RS09530	COG2914	Belongs to the UPF0125 (RnfH) family
FEO88_RS09535	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FEO88_RS09540	COG0735	belongs to the Fur family
FEO88_RS09550	COG0583	DNA-binding transcription factor activity
FEO88_RS09555	COG0497	DNA recombination
FEO88_RS09560	COG1420	regulation of RNA biosynthetic process
FEO88_RS09565	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FEO88_RS09570	COG0443	Heat shock 70 kDa protein
FEO88_RS09575	COG0484	heat shock protein binding
FEO88_RS09580	COG2207	Transcriptional regulator
FEO88_RS09585	COG2223	nitrite transmembrane transporter activity
FEO88_RS09595	COG0287	Prephenate dehydrogenase
FEO88_RS09595	COG1605	Chorismate mutase
FEO88_RS09605	COG1132	(ABC) transporter
FEO88_RS09635	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FEO88_RS09640	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FEO88_RS09645	COG0343	queuine tRNA-ribosyltransferase activity
FEO88_RS09650	COG1862	Preprotein translocase
FEO88_RS09660	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FEO88_RS09665	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FEO88_RS09675	COG2081	HI0933 family
FEO88_RS09680	COG4681	YaeQ
FEO88_RS09700	COG0625	glutathione transferase activity
FEO88_RS09705	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FEO88_RS09710	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FEO88_RS09715	COG0513	Belongs to the DEAD box helicase family
FEO88_RS09725	COG0583	DNA-binding transcription factor activity
FEO88_RS09730	COG0488	(ABC) transporter
FEO88_RS09755	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FEO88_RS09770	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FEO88_RS09775	COG2957	Belongs to the agmatine deiminase family
FEO88_RS09785	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FEO88_RS09790	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FEO88_RS09800	COG0776	regulation of translation
FEO88_RS09810	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FEO88_RS09825	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FEO88_RS09830	COG0183	Belongs to the thiolase family
FEO88_RS09845	COG0105	UTP biosynthetic process
FEO88_RS09850	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FEO88_RS09865	COG2976	Protein conserved in bacteria
FEO88_RS09870	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FEO88_RS09875	COG1160	GTP binding
FEO88_RS09895	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FEO88_RS09900	COG0475	glutathione-regulated potassium exporter activity
FEO88_RS09900	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FEO88_RS09915	COG0519	Catalyzes the synthesis of GMP from XMP
FEO88_RS09915	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FEO88_RS09920	COG0582	viral genome integration into host DNA
FEO88_RS09940	COG2003	Belongs to the UPF0758 family
FEO88_RS09960	COG1475	DNA binding
FEO88_RS10000	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FEO88_RS10005	COG2217	Heavy metal translocating P-type atpase
FEO88_RS10010	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FEO88_RS10025	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FEO88_RS10030	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FEO88_RS10055	COG0789	Transcriptional regulator
FEO88_RS10060	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FEO88_RS10120	COG2132	Multicopper oxidase
FEO88_RS10185	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FEO88_RS10215	COG4644	lycopene metabolic process
FEO88_RS10220	COG5489	Protein of unknown function (DUF736)
FEO88_RS10225	COG1396	sequence-specific DNA binding
FEO88_RS10250	COG1192	Involved in chromosome partitioning
FEO88_RS10265	COG4959	Type IV secretory pathway protease TraF
FEO88_RS10275	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FEO88_RS10295	COG0464	growth
FEO88_RS10315	COG0583	DNA-binding transcription factor activity
FEO88_RS10335	COG4962	Type ii secretion system protein e
FEO88_RS10340	COG3838	Conjugal transfer protein Trbc
FEO88_RS10350	COG3451	type IV secretory pathway VirB4
FEO88_RS10365	COG3846	protein secretion by the type IV secretion system
FEO88_RS10400	COG2175	clavaminate synthase activity
FEO88_RS10420	COG0583	DNA-binding transcription factor activity
FEO88_RS10440	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS10450	COG0640	Transcriptional regulator
FEO88_RS10465	COG4716	Myosin-crossreactive antigen
FEO88_RS10485	COG0431	NADPH-dependent FMN reductase
FEO88_RS10495	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FEO88_RS10500	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FEO88_RS10505	COG1473	amidohydrolase
FEO88_RS10510	COG0456	acetyltransferase
FEO88_RS10515	COG1126	abc transporter atp-binding protein
FEO88_RS10520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FEO88_RS10545	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FEO88_RS10550	COG0583	DNA-binding transcription factor activity
FEO88_RS10560	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS10570	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FEO88_RS10590	COG1309	transcriptional regulator
FEO88_RS10605	COG0697	spore germination
FEO88_RS10610	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FEO88_RS10615	COG0167	dihydroorotate dehydrogenase activity
FEO88_RS10630	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS10635	COG1012	belongs to the aldehyde dehydrogenase family
FEO88_RS10650	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FEO88_RS10655	COG0489	protein tyrosine kinase activity
FEO88_RS10655	COG3206	protein involved in exopolysaccharide biosynthesis
FEO88_RS10695	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FEO88_RS10730	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FEO88_RS10760	COG0745	RESPONSE REGULATOR receiver
FEO88_RS10770	COG2205	protein histidine kinase activity
FEO88_RS10770	COG3850	Histidine kinase
FEO88_RS10770	COG3437	response regulator, receiver
FEO88_RS10770	COG4999	Histidine kinase
FEO88_RS10775	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FEO88_RS10785	COG5002	protein histidine kinase activity
FEO88_RS10795	COG0640	Transcriptional regulator
FEO88_RS10830	COG0527	aspartate kinase activity
FEO88_RS10830	COG0460	homoserine dehydrogenase
FEO88_RS10835	COG0083	homoserine kinase activity
FEO88_RS10840	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FEO88_RS10845	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEO88_RS10850	COG0124	histidyl-tRNA synthetase
FEO88_RS10865	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FEO88_RS10870	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FEO88_RS10875	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FEO88_RS10880	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FEO88_RS10880	COG0131	Imidazoleglycerol-phosphate dehydratase
FEO88_RS10885	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FEO88_RS10890	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FEO88_RS10895	COG0107	imidazoleglycerol-phosphate synthase activity
FEO88_RS10900	COG0140	phosphoribosyl-ATP diphosphatase activity
FEO88_RS10900	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FEO88_RS10920	COG1446	asparaginase
FEO88_RS10925	COG3142	Participates in the control of copper homeostasis
FEO88_RS10940	COG0789	Transcriptional regulator
FEO88_RS10955	COG3537	Alpha-1,2-mannosidase
FEO88_RS10960	COG1609	Transcriptional regulator
FEO88_RS10970	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FEO88_RS10985	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
FEO88_RS10990	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
FEO88_RS10995	COG0235	Class ii aldolase
FEO88_RS11000	COG0531	amino acid
FEO88_RS11005	COG0531	amino acid
FEO88_RS11015	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FEO88_RS11020	COG0277	FAD linked oxidase domain protein
FEO88_RS11035	COG2205	protein histidine kinase activity
FEO88_RS11040	COG0745	RESPONSE REGULATOR receiver
FEO88_RS11045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS11050	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FEO88_RS11070	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FEO88_RS11115	COG2249	NAD(P)H dehydrogenase (quinone) activity
FEO88_RS11130	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FEO88_RS11135	COG0505	Belongs to the CarA family
FEO88_RS11140	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FEO88_RS11145	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FEO88_RS11155	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FEO88_RS11185	COG3279	Response regulator of the LytR AlgR family
FEO88_RS11200	COG1012	belongs to the aldehyde dehydrogenase family
FEO88_RS11210	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FEO88_RS11220	COG2205	protein histidine kinase activity
FEO88_RS11220	COG0784	Response regulator, receiver
FEO88_RS11220	COG2198	Histidine kinase
FEO88_RS11225	COG1024	Enoyl-CoA hydratase
FEO88_RS11230	COG0318	PFAM AMP-dependent synthetase and ligase
FEO88_RS11235	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FEO88_RS11240	COG1012	belongs to the aldehyde dehydrogenase family
FEO88_RS11245	COG1309	transcriptional regulator
FEO88_RS11250	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FEO88_RS11280	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FEO88_RS11295	COG0840	transmembrane signaling receptor activity
FEO88_RS11305	COG0835	chemotaxis
FEO88_RS11310	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FEO88_RS11315	COG0840	transmembrane signaling receptor activity
FEO88_RS11325	COG0745	RESPONSE REGULATOR receiver
FEO88_RS11335	COG0835	chemotaxis
FEO88_RS11345	COG1360	Flagellar Motor Protein
FEO88_RS11350	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FEO88_RS11355	COG2198	Histidine kinase
FEO88_RS11355	COG0784	Response regulator, receiver
FEO88_RS11355	COG0643	Histidine kinase
FEO88_RS11360	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FEO88_RS11385	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FEO88_RS11390	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FEO88_RS11405	COG1987	bacterial-type flagellum assembly
FEO88_RS11415	COG3190	flagellar
FEO88_RS11465	COG1677	Flagellar hook-basal body complex protein FliE
FEO88_RS11490	COG2197	response regulator
FEO88_RS11545	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FEO88_RS11555	COG4787	bacterial-type flagellum-dependent cell motility
FEO88_RS11570	COG1558	bacterial-type flagellum-dependent cell motility
FEO88_RS11575	COG1815	bacterial-type flagellum-dependent cell motility
FEO88_RS11580	COG0835	chemotaxis
FEO88_RS11580	COG0784	Response regulator, receiver
FEO88_RS11600	COG5002	protein histidine kinase activity
FEO88_RS11645	COG2915	High frequency lysogenization protein hflD homolog
FEO88_RS11650	COG0482	sulfurtransferase activity
FEO88_RS11665	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FEO88_RS11675	COG0542	response to heat
FEO88_RS11685	COG3093	addiction module antidote protein HigA
FEO88_RS11720	COG0492	ferredoxin-NADP+ reductase activity
FEO88_RS11725	COG1674	ftsk spoiiie
FEO88_RS11740	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FEO88_RS11755	COG2819	hydrolase of the alpha beta superfamily
FEO88_RS11765	COG4558	Periplasmic binding protein
FEO88_RS11770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FEO88_RS11775	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FEO88_RS11785	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FEO88_RS11800	COG5002	protein histidine kinase activity
FEO88_RS11800	COG0784	Response regulator, receiver
FEO88_RS11805	COG2197	response regulator
FEO88_RS11835	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FEO88_RS11845	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FEO88_RS11860	COG1595	DNA-templated transcription, initiation
FEO88_RS11880	COG0784	Response regulator, receiver
FEO88_RS11895	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
FEO88_RS11905	COG1073	alpha beta
FEO88_RS11910	COG0300	oxidoreductase activity
FEO88_RS11930	COG1073	alpha beta
FEO88_RS11935	COG1064	alcohol dehydrogenase
FEO88_RS11940	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FEO88_RS11955	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FEO88_RS11960	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS11990	COG1252	NADH dehydrogenase
FEO88_RS12140	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FEO88_RS12145	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FEO88_RS12150	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FEO88_RS12155	COG2080	2 iron, 2 sulfur cluster binding
FEO88_RS12175	COG1595	DNA-templated transcription, initiation
FEO88_RS12200	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS12210	COG1741	Belongs to the pirin family
FEO88_RS12215	COG0583	DNA-binding transcription factor activity
FEO88_RS12220	COG2259	Doxx family
FEO88_RS12235	COG0321	lipoyl(octanoyl) transferase activity
FEO88_RS12235	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FEO88_RS12240	COG1764	response to oxidative stress
FEO88_RS12245	COG1090	epimerase
FEO88_RS12250	COG0583	DNA-binding transcription factor activity
FEO88_RS12255	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FEO88_RS12265	COG1595	DNA-templated transcription, initiation
FEO88_RS12275	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FEO88_RS12305	COG1819	glycosyl
FEO88_RS12330	COG1309	transcriptional regulator
FEO88_RS12370	COG3685	Protein conserved in bacteria
FEO88_RS12400	COG2200	EAL domain
FEO88_RS12410	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FEO88_RS12430	COG1063	alcohol dehydrogenase
FEO88_RS12505	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FEO88_RS12510	COG0583	DNA-binding transcription factor activity
FEO88_RS12525	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FEO88_RS12555	COG5265	(ABC) transporter
FEO88_RS12575	COG4555	ABC transporter
FEO88_RS12595	COG2207	Transcriptional regulator
FEO88_RS12630	COG0318	PFAM AMP-dependent synthetase and ligase
FEO88_RS12640	COG2186	Transcriptional regulator
FEO88_RS12660	COG2271	Major facilitator Superfamily
FEO88_RS12665	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS12695	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FEO88_RS12715	COG0583	DNA-binding transcription factor activity
FEO88_RS12835	COG3447	MASE1 domain protein
FEO88_RS12835	COG5001	Diguanylate cyclase
FEO88_RS12835	COG5002	protein histidine kinase activity
FEO88_RS12840	COG1136	(ABC) transporter
FEO88_RS12840	COG0577	efflux transmembrane transporter activity
FEO88_RS12845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS12855	COG0745	RESPONSE REGULATOR receiver
FEO88_RS12860	COG2205	protein histidine kinase activity
FEO88_RS12880	COG4774	siderophore transport
FEO88_RS12900	COG3214	Protein conserved in bacteria
FEO88_RS12910	COG4774	siderophore transport
FEO88_RS12940	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FEO88_RS12945	COG1285	pathogenesis
FEO88_RS12950	COG4191	Histidine kinase
FEO88_RS12955	COG4566	intracellular signal transduction
FEO88_RS13005	COG0243	molybdopterin cofactor binding
FEO88_RS13055	COG1136	(ABC) transporter
FEO88_RS13070	COG4771	TonB-dependent receptor
FEO88_RS13095	COG5002	protein histidine kinase activity
FEO88_RS13100	COG0583	DNA-binding transcription factor activity
FEO88_RS13105	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS13140	COG3537	Alpha-1,2-mannosidase
FEO88_RS13145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FEO88_RS13160	COG0477	Major facilitator Superfamily
FEO88_RS13180	COG2202	Pas domain
FEO88_RS13180	COG3920	Histidine kinase
FEO88_RS13225	COG1335	isochorismatase
FEO88_RS13230	COG1335	isochorismatase
FEO88_RS13240	COG0488	(ABC) transporter
FEO88_RS13265	COG0811	peptide transport
FEO88_RS13395	COG0840	transmembrane signaling receptor activity
FEO88_RS13400	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FEO88_RS13410	COG4149	molybdate abc transporter
FEO88_RS13415	COG0725	ABC transporter, periplasmic molybdate-binding protein
FEO88_RS13420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEO88_RS13435	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FEO88_RS13440	COG2181	nitrate reductase activity
FEO88_RS13445	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FEO88_RS13450	COG1140	nitrate reductase beta subunit
FEO88_RS13455	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FEO88_RS13460	COG2223	nitrite transmembrane transporter activity
FEO88_RS13470	COG0746	molybdenum cofactor guanylyltransferase activity
FEO88_RS13475	COG0314	molybdopterin synthase activity
FEO88_RS13485	COG0303	'Molybdopterin
FEO88_RS13490	COG0315	cyclic pyranopterin monophosphate synthase activity
FEO88_RS13490	COG0521	Mo-molybdopterin cofactor biosynthetic process
FEO88_RS13495	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FEO88_RS13535	COG0789	Transcriptional regulator
FEO88_RS13540	COG0431	NADPH-dependent FMN reductase
FEO88_RS13550	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FEO88_RS13555	COG0798	PFAM Bile acid sodium symporter
FEO88_RS13630	COG1943	Transposase
FEO88_RS13635	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS13640	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FEO88_RS13640	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FEO88_RS13645	COG3433	isochorismatase activity
FEO88_RS13645	COG1535	isochorismatase
FEO88_RS13650	COG1535	isochorismatase
FEO88_RS13650	COG3433	isochorismatase activity
FEO88_RS13655	COG1021	2,3-dihydroxybenzoate-AMP ligase
FEO88_RS13660	COG1169	isochorismate synthase
FEO88_RS13670	COG2409	Drug exporters of the RND superfamily
FEO88_RS13675	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FEO88_RS13740	COG1914	H( )-stimulated, divalent metal cation uptake system
FEO88_RS13755	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEO88_RS13760	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEO88_RS13770	COG4206	TonB-dependent receptor
FEO88_RS13775	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FEO88_RS13820	COG4772	TonB-dependent receptor
FEO88_RS13885	COG4964	Belongs to the GSP D family
FEO88_RS13940	COG2814	Major facilitator Superfamily
FEO88_RS13950	COG1228	amidohydrolase
FEO88_RS13960	COG1335	isochorismatase
FEO88_RS13975	COG3850	Histidine kinase
FEO88_RS13980	COG2197	response regulator
FEO88_RS13985	COG4946	Tricorn protease homolog
FEO88_RS13985	COG1506	peptidase
FEO88_RS13985	COG0823	Involved in the tonB-independent uptake of proteins
FEO88_RS13990	COG4565	transcriptional regulatory protein
FEO88_RS13995	COG3275	phosphorelay sensor kinase activity
FEO88_RS14000	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FEO88_RS14010	COG0583	DNA-binding transcription factor activity
FEO88_RS14025	COG3161	chorismate lyase activity
FEO88_RS14045	COG2134	cdp-diacylglycerol pyrophosphatase
FEO88_RS14070	COG0277	FAD linked oxidase domain protein
FEO88_RS14075	COG1304	FMN binding
FEO88_RS14080	COG2186	Transcriptional regulator
FEO88_RS14095	COG1285	pathogenesis
FEO88_RS14120	COG2814	Major facilitator Superfamily
FEO88_RS14190	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FEO88_RS14195	COG0519	Catalyzes the synthesis of GMP from XMP
FEO88_RS14195	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FEO88_RS14210	COG1595	DNA-templated transcription, initiation
FEO88_RS14220	COG1629	transport
FEO88_RS14220	COG4206	TonB-dependent receptor
FEO88_RS14250	COG0531	amino acid
FEO88_RS14265	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FEO88_RS14275	COG0789	Transcriptional regulator
FEO88_RS14370	COG3447	MASE1 domain protein
FEO88_RS14370	COG5001	Diguanylate cyclase
FEO88_RS14370	COG5002	protein histidine kinase activity
FEO88_RS14375	COG2183	response to ionizing radiation
FEO88_RS14400	COG3243	poly(R)-hydroxyalkanoic acid synthase
FEO88_RS14420	COG0534	Mate efflux family protein
FEO88_RS14440	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FEO88_RS14450	COG0668	transmembrane transport
FEO88_RS14455	COG1902	pentaerythritol trinitrate reductase activity
FEO88_RS14465	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FEO88_RS14475	COG1733	regulation of RNA biosynthetic process
FEO88_RS14480	COG2249	NAD(P)H dehydrogenase (quinone) activity
FEO88_RS14585	COG3702	type iv secretory pathway
FEO88_RS14605	COG2948	multi-organism process
FEO88_RS14615	COG3736	Type IV secretory pathway, component VirB8
FEO88_RS14635	COG2814	Major facilitator Superfamily
FEO88_RS14640	COG0789	Transcriptional regulator
FEO88_RS14645	COG1902	pentaerythritol trinitrate reductase activity
FEO88_RS14645	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEO88_RS14670	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FEO88_RS14680	COG4774	siderophore transport
FEO88_RS14690	COG0745	RESPONSE REGULATOR receiver
FEO88_RS14745	COG1733	regulation of RNA biosynthetic process
FEO88_RS14750	COG0604	alcohol dehydrogenase
FEO88_RS14760	COG0210	DNA helicase
FEO88_RS14835	COG0583	DNA-binding transcription factor activity
FEO88_RS14840	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FEO88_RS14850	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FEO88_RS14865	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FEO88_RS14870	COG0077	Prephenate dehydratase
FEO88_RS14870	COG1605	Chorismate mutase
FEO88_RS14875	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FEO88_RS14920	COG1228	amidohydrolase
FEO88_RS14935	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FEO88_RS14980	COG2957	Belongs to the agmatine deiminase family
FEO88_RS15060	COG4993	Dehydrogenase
FEO88_RS15070	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
FEO88_RS15080	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FEO88_RS15090	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FEO88_RS15095	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FEO88_RS15110	COG0359	binds to the 23S rRNA
FEO88_RS15115	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FEO88_RS15120	COG0360	Binds together with S18 to 16S ribosomal RNA
FEO88_RS15130	COG0316	Belongs to the HesB IscA family
FEO88_RS15135	COG0017	Asparaginyl-tRNA synthetase
FEO88_RS15150	COG2808	Putative FMN-binding domain
FEO88_RS15155	COG0288	reversible hydration of carbon dioxide
FEO88_RS15160	COG0662	Cupin 2, conserved barrel domain protein
FEO88_RS15165	COG3844	kynureninase activity
FEO88_RS15170	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FEO88_RS15175	COG2925	Exonuclease
FEO88_RS15185	COG0667	Aldo Keto reductase
FEO88_RS15205	COG2902	Dehydrogenase
FEO88_RS15215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS15230	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS15245	COG0646	methionine synthase
FEO88_RS15245	COG1410	methionine synthase
FEO88_RS15250	COG2755	lipolytic protein G-D-S-L family
FEO88_RS15250	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FEO88_RS15260	COG2900	Belongs to the SlyX family
FEO88_RS15275	COG0386	Belongs to the glutathione peroxidase family
FEO88_RS15280	COG1725	Transcriptional regulator
FEO88_RS15285	COG1131	(ABC) transporter
FEO88_RS15310	COG0114	fumarate hydratase activity
FEO88_RS15320	COG2850	peptidyl-arginine hydroxylation
FEO88_RS15330	COG0567	Dehydrogenase, E1 component
FEO88_RS15350	COG3540	Alkaline phosphatase
FEO88_RS15360	COG0305	Participates in initiation and elongation during chromosome replication
FEO88_RS15380	COG0625	glutathione transferase activity
FEO88_RS15400	COG0084	hydrolase, TatD family'
FEO88_RS15405	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FEO88_RS15440	COG0625	glutathione transferase activity
FEO88_RS15460	COG1595	DNA-templated transcription, initiation
FEO88_RS15465	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FEO88_RS15485	COG0386	Belongs to the glutathione peroxidase family
FEO88_RS15490	COG0339	signal peptide processing
FEO88_RS15500	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FEO88_RS15520	COG0705	Rhomboid family
FEO88_RS15525	COG3104	oligopeptide transport
FEO88_RS15535	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FEO88_RS15540	COG4290	ribonuclease
FEO88_RS15555	COG0316	Belongs to the HesB IscA family
FEO88_RS15555	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FEO88_RS15560	COG2154	pterin-4-alpha-carbinolamine dehydratase
FEO88_RS15570	COG0428	transporter
FEO88_RS15580	COG1530	ribonuclease E activity
FEO88_RS15595	COG0395	ABC-type sugar transport system, permease component
FEO88_RS15620	COG1609	Transcriptional regulator
FEO88_RS15625	COG0271	Belongs to the BolA IbaG family
FEO88_RS15630	COG2350	Protein conserved in bacteria
FEO88_RS15635	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FEO88_RS15640	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FEO88_RS15645	COG1187	pseudouridine synthase activity
FEO88_RS15655	COG2814	Major facilitator Superfamily
FEO88_RS15680	COG0436	Aminotransferase
FEO88_RS15685	COG4133	protoheme IX ABC transporter activity
FEO88_RS15705	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FEO88_RS15720	COG4235	cytochrome complex assembly
FEO88_RS15720	COG3088	subunit of a heme lyase
FEO88_RS15730	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FEO88_RS15740	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FEO88_RS15745	COG4988	ABC transporter
FEO88_RS15755	COG1294	oxidase, subunit
FEO88_RS15790	COG1215	transferase activity, transferring glycosyl groups
FEO88_RS15815	COG0165	Argininosuccinate lyase
FEO88_RS15820	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FEO88_RS15830	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FEO88_RS15835	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FEO88_RS15840	COG0137	argininosuccinate synthase activity
FEO88_RS15845	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FEO88_RS15860	COG2166	iron-sulfur cluster assembly
FEO88_RS15880	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FEO88_RS15905	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FEO88_RS15910	COG0402	S-adenosylhomocysteine deaminase activity
FEO88_RS15915	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FEO88_RS15920	COG1509	lysine 2,3-aminomutase activity
FEO88_RS15925	COG5001	Diguanylate cyclase
FEO88_RS15925	COG3300	MHYT domain
FEO88_RS15945	COG0501	Belongs to the peptidase M48B family
FEO88_RS15955	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS15975	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FEO88_RS15980	COG0860	N-Acetylmuramoyl-L-alanine amidase
FEO88_RS15985	COG0802	atpase or kinase
FEO88_RS15990	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FEO88_RS15990	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FEO88_RS15995	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FEO88_RS16000	COG1570	exodeoxyribonuclease VII activity
FEO88_RS16010	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FEO88_RS16025	COG4771	TonB-dependent receptor
FEO88_RS16045	COG2169	Transcriptional regulator
FEO88_RS16045	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FEO88_RS16050	COG2130	NADP-dependent
FEO88_RS16075	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS16085	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FEO88_RS16120	COG2076	Multidrug Resistance protein
FEO88_RS16125	COG5487	UPF0391 membrane protein
FEO88_RS16130	COG1280	lysine exporter protein (LysE YggA)
FEO88_RS16135	COG0740	serine-type endopeptidase activity
FEO88_RS16150	COG1794	racemase activity, acting on amino acids and derivatives
FEO88_RS16190	COG0776	regulation of translation
FEO88_RS16200	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FEO88_RS16205	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FEO88_RS16210	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FEO88_RS16215	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FEO88_RS16220	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FEO88_RS16255	COG1185	polyribonucleotide nucleotidyltransferase activity
FEO88_RS16260	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FEO88_RS16270	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FEO88_RS16275	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FEO88_RS16280	COG0195	Participates in both transcription termination and antitermination
FEO88_RS16285	COG0779	Required for maturation of 30S ribosomal subunits
FEO88_RS16300	COG1007	ATP synthesis coupled electron transport
FEO88_RS16315	COG0713	ATP synthesis coupled electron transport
FEO88_RS16325	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FEO88_RS16330	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FEO88_RS16345	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FEO88_RS16350	COG0649	NAD binding
FEO88_RS16355	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FEO88_RS16360	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FEO88_RS16365	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FEO88_RS16380	COG0149	triose-phosphate isomerase activity
FEO88_RS16390	COG3119	arylsulfatase activity
FEO88_RS16395	COG0438	transferase activity, transferring glycosyl groups
FEO88_RS16400	COG0726	polysaccharide deacetylase
FEO88_RS16405	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FEO88_RS16410	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FEO88_RS16415	COG0159	tryptophan synthase activity
FEO88_RS16425	COG0133	tryptophan synthase activity
FEO88_RS16445	COG0135	phosphoribosylanthranilate isomerase activity
FEO88_RS16450	COG0101	tRNA pseudouridine synthase activity
FEO88_RS16465	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FEO88_RS16470	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FEO88_RS16475	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FEO88_RS16480	COG2890	protein-(glutamine-N5) methyltransferase activity
FEO88_RS16485	COG1999	signal sequence binding
FEO88_RS16490	COG0688	phosphatidylethanolamine metabolic process
FEO88_RS16505	COG0433	COG0433 Predicted ATPase
FEO88_RS16510	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FEO88_RS16520	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FEO88_RS16525	COG0412	Dienelactone hydrolase
FEO88_RS16535	COG0717	Belongs to the dCTP deaminase family
FEO88_RS16540	COG0489	protein tyrosine kinase activity
FEO88_RS16545	COG4771	TonB-dependent receptor
FEO88_RS16550	COG4771	TonB-dependent receptor
FEO88_RS16560	COG4771	TonB-dependent receptor
FEO88_RS16565	COG3590	peptidase
FEO88_RS16595	COG0697	spore germination
FEO88_RS16610	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FEO88_RS16615	COG2311	Membrane
FEO88_RS16620	COG1047	Peptidyl-prolyl cis-trans
FEO88_RS16625	COG0791	NLP P60 protein
FEO88_RS16630	COG0791	NLP P60 protein
FEO88_RS16635	COG1301	dicarboxylic acid transport
FEO88_RS16655	COG1722	exodeoxyribonuclease VII activity
FEO88_RS16660	COG0142	geranyltranstransferase activity
FEO88_RS16670	COG0312	modulator of DNA gyrase
FEO88_RS16675	COG3028	Belongs to the UPF0307 family
FEO88_RS16680	COG0312	modulator of DNA gyrase
FEO88_RS16700	COG2968	Membrane
FEO88_RS16710	COG4771	TonB-dependent receptor
FEO88_RS16725	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FEO88_RS16735	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FEO88_RS16750	COG0495	leucyl-tRNA aminoacylation
FEO88_RS16760	COG3118	belongs to the thioredoxin family
FEO88_RS16770	COG2203	Gaf domain
FEO88_RS16770	COG3706	GGDEF domain
FEO88_RS16770	COG4251	negative regulation of phosphorylation
FEO88_RS16770	COG5001	Diguanylate cyclase
FEO88_RS16775	COG1943	Transposase
FEO88_RS16795	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FEO88_RS16805	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEO88_RS16810	COG0346	lactoylglutathione lyase activity
FEO88_RS16820	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FEO88_RS16820	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FEO88_RS16830	COG2878	Part of a membrane complex involved in electron transport
FEO88_RS16835	COG0251	oxidation-reduction process
FEO88_RS16840	COG0392	lysyltransferase activity
FEO88_RS16840	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FEO88_RS16870	COG2824	Alkylphosphonate utilization operon protein PhnA
FEO88_RS16875	COG0443	Heat shock 70 kDa protein
FEO88_RS16920	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FEO88_RS16925	COG3122	Protein conserved in bacteria
FEO88_RS16930	COG1451	nucleotide metabolic process
FEO88_RS16940	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FEO88_RS16960	COG0183	Belongs to the thiolase family
FEO88_RS16975	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS16985	COG1793	dna ligase
FEO88_RS16990	COG1201	RNA secondary structure unwinding
FEO88_RS17005	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FEO88_RS17010	COG1278	Cold shock
FEO88_RS17015	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FEO88_RS17020	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FEO88_RS17025	COG1472	Belongs to the glycosyl hydrolase 3 family
FEO88_RS17030	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FEO88_RS17035	COG2954	triphosphatase activity
FEO88_RS17040	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FEO88_RS17045	COG0745	RESPONSE REGULATOR receiver
FEO88_RS17050	COG1381	Involved in DNA repair and RecF pathway recombination
FEO88_RS17055	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FEO88_RS17070	COG0681	Belongs to the peptidase S26 family
FEO88_RS17075	COG0481	GTPase activity
FEO88_RS17080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FEO88_RS17100	COG1741	Belongs to the pirin family
FEO88_RS17105	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEO88_RS17115	COG1741	Belongs to the pirin family
FEO88_RS17120	COG1966	Carbon starvation protein
FEO88_RS17125	COG2879	small protein
FEO88_RS17140	COG2205	protein histidine kinase activity
FEO88_RS17145	COG0745	RESPONSE REGULATOR receiver
FEO88_RS17180	COG2814	Major facilitator Superfamily
FEO88_RS17185	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FEO88_RS17185	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FEO88_RS17205	COG1113	amino acid transport
FEO88_RS17210	COG2207	Transcriptional regulator
FEO88_RS17210	COG1917	Cupin 2, conserved barrel domain protein
FEO88_RS17215	COG0753	catalase activity
FEO88_RS17245	COG1376	ErfK ybiS ycfS ynhG family protein
FEO88_RS17250	COG0739	heme binding
FEO88_RS17260	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FEO88_RS17270	COG0330	HflC and HflK could
FEO88_RS17275	COG0330	HflC and HflK could
FEO88_RS17280	COG0604	alcohol dehydrogenase
FEO88_RS17295	COG0678	peroxiredoxin activity
FEO88_RS17305	COG4953	penicillin-binding protein 1C
FEO88_RS17310	COG2373	Large extracellular alpha-helical protein
FEO88_RS17315	COG2079	MmgE PrpD family protein
FEO88_RS17320	COG2828	Protein conserved in bacteria
FEO88_RS17330	COG3609	addiction module antidote protein, CC2985 family
FEO88_RS17365	COG0259	pyridoxamine-phosphate oxidase activity
FEO88_RS17380	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FEO88_RS17400	COG0477	Major facilitator Superfamily
FEO88_RS17420	COG3038	cytochrome b561
FEO88_RS17435	COG1760	l-serine dehydratase
FEO88_RS17440	COG2267	carboxylic ester hydrolase activity
FEO88_RS17450	COG0626	cystathionine gamma-synthase activity
FEO88_RS17455	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FEO88_RS17465	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FEO88_RS17470	COG1272	protein, Hemolysin III
FEO88_RS17485	COG0463	Glycosyl transferase, family 2
FEO88_RS17490	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FEO88_RS17495	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FEO88_RS17505	COG4206	TonB-dependent receptor
FEO88_RS17510	COG1309	transcriptional regulator
FEO88_RS17520	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS17575	COG0509	glycine decarboxylation via glycine cleavage system
FEO88_RS17580	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FEO88_RS17600	COG1742	UPF0060 membrane protein
FEO88_RS17640	COG1960	acyl-CoA dehydrogenase activity
FEO88_RS17680	COG0583	DNA-binding transcription factor activity
FEO88_RS17695	COG0509	glycine decarboxylation via glycine cleavage system
FEO88_RS17700	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FEO88_RS17710	COG0330	HflC and HflK could
FEO88_RS17720	COG1742	UPF0060 membrane protein
FEO88_RS17725	COG3956	TIGRFAM MazG family protein
FEO88_RS17730	COG1218	3'(2'),5'-bisphosphate nucleotidase
FEO88_RS17735	COG0494	nUDIX hydrolase
FEO88_RS17745	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FEO88_RS17765	COG0840	transmembrane signaling receptor activity
FEO88_RS17770	COG0835	chemotaxis
FEO88_RS17785	COG0189	ligase activity
FEO88_RS17810	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FEO88_RS17815	COG1216	Glycosyl transferase, family 2
FEO88_RS17825	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FEO88_RS17835	COG1643	Atp-dependent helicase
FEO88_RS17840	COG0783	Belongs to the Dps family
FEO88_RS17845	COG0514	ATP-dependent DNA helicase (RecQ)
FEO88_RS17890	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FEO88_RS17915	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FEO88_RS17920	COG0602	queuosine metabolic process
FEO88_RS17930	COG2885	chlorophyll binding
FEO88_RS17935	COG0823	Involved in the tonB-independent uptake of proteins
FEO88_RS17950	COG0811	peptide transport
FEO88_RS17955	COG0824	Thioesterase
FEO88_RS17960	COG2255	four-way junction helicase activity
FEO88_RS17970	COG0632	four-way junction helicase activity
FEO88_RS17975	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FEO88_RS17980	COG0217	transcriptional regulatory protein
FEO88_RS18000	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FEO88_RS18030	COG0488	(ABC) transporter
FEO88_RS18040	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FEO88_RS18040	COG4651	solute:proton antiporter activity
FEO88_RS18050	COG0745	RESPONSE REGULATOR receiver
FEO88_RS18055	COG2205	protein histidine kinase activity
FEO88_RS18065	COG0542	response to heat
FEO88_RS18095	COG0028	Belongs to the TPP enzyme family
FEO88_RS18120	COG3387	PFAM Glycoside hydrolase 15-related
FEO88_RS18125	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FEO88_RS18130	COG3011	Protein conserved in bacteria
FEO88_RS18145	COG0564	pseudouridine synthase activity
FEO88_RS18150	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FEO88_RS18160	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FEO88_RS18160	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FEO88_RS18170	COG0045	succinate-CoA ligase (ADP-forming) activity
FEO88_RS18205	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FEO88_RS18215	COG2205	protein histidine kinase activity
FEO88_RS18220	COG0745	RESPONSE REGULATOR receiver
FEO88_RS18235	COG0189	ligase activity
FEO88_RS18260	COG3152	Membrane
FEO88_RS18270	COG4625	pathogenesis
FEO88_RS18270	COG3240	lipase activity
FEO88_RS18280	COG2022	thiamine diphosphate biosynthetic process
FEO88_RS18285	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FEO88_RS18290	COG3273	potassium ion transport
FEO88_RS18290	COG0471	metal ion transport
FEO88_RS18310	COG1970	mechanosensitive ion channel activity
FEO88_RS18325	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FEO88_RS18330	COG1115	amino acid carrier protein
FEO88_RS18335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FEO88_RS18340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FEO88_RS18345	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS18370	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FEO88_RS18380	COG3588	fructose-bisphosphate aldolase
FEO88_RS18385	COG0469	pyruvate kinase activity
FEO88_RS18395	COG0126	phosphoglycerate kinase activity
FEO88_RS18410	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FEO88_RS18415	COG3047	cAMP biosynthetic process
FEO88_RS18455	COG3093	addiction module antidote protein HigA
FEO88_RS18465	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FEO88_RS18470	COG1301	dicarboxylic acid transport
FEO88_RS18480	COG2304	oxidoreductase activity
FEO88_RS18500	COG0714	Associated with various cellular activities
FEO88_RS18530	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FEO88_RS18545	COG5295	Hep Hag repeat protein
FEO88_RS18585	COG0254	rRNA binding
FEO88_RS18600	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FEO88_RS18610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FEO88_RS18615	COG1758	RNA polymerase activity
FEO88_RS18630	COG0437	4 iron, 4 sulfur cluster binding
FEO88_RS18635	COG2864	formate dehydrogenase
FEO88_RS18645	COG1921	L-seryl-tRNASec selenium transferase activity
FEO88_RS18650	COG3276	selenocysteine insertion sequence binding
FEO88_RS18660	COG0709	Synthesizes selenophosphate from selenide and ATP
FEO88_RS18665	COG1561	YicC-like family, N-terminal region
FEO88_RS18670	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FEO88_RS18675	COG0346	lactoylglutathione lyase activity
FEO88_RS18685	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FEO88_RS18700	COG0006	proline dipeptidase activity
FEO88_RS18705	COG0006	proline dipeptidase activity
FEO88_RS18710	COG3079	Belongs to the UPF0149 family
FEO88_RS18730	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FEO88_RS18740	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FEO88_RS18750	COG2912	Transglutaminase-like superfamily
FEO88_RS18755	COG1773	rubredoxin
FEO88_RS18765	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FEO88_RS18770	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FEO88_RS18780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FEO88_RS18785	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEO88_RS18800	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS18825	COG0671	phosphoesterase, PA-phosphatase related
FEO88_RS18835	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FEO88_RS18840	COG0563	adenylate kinase activity
FEO88_RS18865	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
FEO88_RS18875	COG0848	biopolymer transport protein
FEO88_RS18885	COG2832	Protein of unknown function (DUF454)
FEO88_RS18920	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FEO88_RS18945	COG0745	RESPONSE REGULATOR receiver
FEO88_RS18955	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FEO88_RS18960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FEO88_RS18965	COG0405	Gamma-glutamyltransferase
FEO88_RS18970	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FEO88_RS18990	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FEO88_RS18995	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FEO88_RS19010	COG0473	3-isopropylmalate dehydrogenase activity
FEO88_RS19035	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS19045	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FEO88_RS19050	COG1538	Outer membrane efflux protein
FEO88_RS19055	COG0531	amino acid
FEO88_RS19060	COG1519	Transferase
FEO88_RS19065	COG1560	Kdo2-lipid A biosynthetic process
FEO88_RS19115	COG1301	dicarboxylic acid transport
FEO88_RS19125	COG4191	Histidine kinase
FEO88_RS19140	COG0642	Histidine kinase
FEO88_RS19155	COG2851	Citrate transporter
FEO88_RS19160	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS19180	COG1162	GTPase activity
FEO88_RS19185	COG0436	Aminotransferase
FEO88_RS19205	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FEO88_RS19220	COG1228	amidohydrolase
FEO88_RS19225	COG0804	urea catabolic process
FEO88_RS19235	COG1307	EDD domain protein, DegV family
FEO88_RS19275	COG4251	negative regulation of phosphorylation
FEO88_RS19275	COG2203	Gaf domain
FEO88_RS19275	COG5001	Diguanylate cyclase
FEO88_RS19275	COG3706	GGDEF domain
FEO88_RS19280	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FEO88_RS19290	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FEO88_RS19300	COG4206	TonB-dependent receptor
FEO88_RS19310	COG1902	pentaerythritol trinitrate reductase activity
FEO88_RS19335	COG0583	DNA-binding transcription factor activity
FEO88_RS19340	COG1064	alcohol dehydrogenase
FEO88_RS19350	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FEO88_RS19370	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FEO88_RS19375	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FEO88_RS19385	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FEO88_RS19390	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FEO88_RS19405	COG1522	sequence-specific DNA binding
FEO88_RS19415	COG4773	Receptor
FEO88_RS19420	COG4206	TonB-dependent receptor
FEO88_RS19445	COG0617	tRNA 3'-terminal CCA addition
FEO88_RS19465	COG3468	outer membrane autotransporter barrel domain protein
FEO88_RS19475	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FEO88_RS19480	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FEO88_RS19485	COG1609	Transcriptional regulator
FEO88_RS19495	COG0837	glucose binding
FEO88_RS19525	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FEO88_RS19535	COG4191	Histidine kinase
FEO88_RS19540	COG0784	Response regulator, receiver
FEO88_RS19545	COG4251	negative regulation of phosphorylation
FEO88_RS19550	COG2823	Periplasmic or secreted lipoprotein
FEO88_RS19555	COG0673	inositol 2-dehydrogenase activity
FEO88_RS19565	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FEO88_RS19585	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FEO88_RS19595	COG2921	Belongs to the UPF0250 family
FEO88_RS19605	COG1686	Belongs to the peptidase S11 family
FEO88_RS19610	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FEO88_RS19615	COG2951	lytic endotransglycosylase activity
FEO88_RS19620	COG0772	Belongs to the SEDS family
FEO88_RS19625	COG0772	Belongs to the SEDS family
FEO88_RS19645	COG1077	Cell shape determining protein MreB Mrl
FEO88_RS19650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FEO88_RS19665	COG0308	aminopeptidase N
FEO88_RS19670	COG2226	methyltransferase
FEO88_RS19715	COG0673	inositol 2-dehydrogenase activity
FEO88_RS19725	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FEO88_RS19745	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FEO88_RS19755	COG2832	Protein of unknown function (DUF454)
FEO88_RS19765	COG0436	Aminotransferase
FEO88_RS19770	COG1505	serine-type exopeptidase activity
FEO88_RS19795	COG0697	spore germination
FEO88_RS19800	COG1666	GTP binding
FEO88_RS19830	COG0339	signal peptide processing
FEO88_RS19840	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FEO88_RS19860	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FEO88_RS19870	COG1136	(ABC) transporter
FEO88_RS19890	COG4191	Histidine kinase
FEO88_RS19900	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FEO88_RS19915	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FEO88_RS19920	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FEO88_RS19925	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FEO88_RS19930	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FEO88_RS19935	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FEO88_RS19940	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FEO88_RS19950	COG0356	it plays a direct role in the translocation of protons across the membrane
FEO88_RS19965	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FEO88_RS19970	COG0508	dehydrogenase complex catalyzes the overall conversion of
FEO88_RS19990	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FEO88_RS20015	COG0181	hydroxymethylbilane synthase activity
FEO88_RS20025	COG2972	Histidine kinase
FEO88_RS20025	COG0745	RESPONSE REGULATOR receiver
FEO88_RS20040	COG4771	TonB-dependent receptor
FEO88_RS20050	COG0840	transmembrane signaling receptor activity
FEO88_RS20115	COG0583	DNA-binding transcription factor activity
FEO88_RS20120	COG0477	Major facilitator Superfamily
FEO88_RS20165	COG0625	glutathione transferase activity
FEO88_RS20180	COG2259	Doxx family
FEO88_RS20260	COG1196	nuclear chromosome segregation
FEO88_RS20540	COG3550	peptidyl-serine autophosphorylation
FEO88_RS20545	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FEO88_RS20550	COG1490	D-aminoacyl-tRNA deacylase activity
FEO88_RS20595	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FEO88_RS20595	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FEO88_RS20600	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FEO88_RS20605	COG0242	peptide deformylase activity
FEO88_RS20615	COG0758	DNA mediated transformation
FEO88_RS20620	COG2922	Belongs to the Smg family
FEO88_RS20630	COG1714	RDD family
FEO88_RS20635	COG1754	DNA topoisomerase type I activity
FEO88_RS20635	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FEO88_RS20640	COG0009	L-threonylcarbamoyladenylate synthase
FEO88_RS20655	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS20665	COG0616	signal peptide processing
FEO88_RS20670	COG0534	Mate efflux family protein
FEO88_RS20685	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FEO88_RS20690	COG0625	glutathione transferase activity
FEO88_RS20700	COG1252	NADH dehydrogenase
FEO88_RS20720	COG2860	membrane
FEO88_RS20735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FEO88_RS20740	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FEO88_RS20760	COG1846	Transcriptional regulator
FEO88_RS20770	COG0625	glutathione transferase activity
FEO88_RS20780	COG0459	protein refolding
FEO88_RS20785	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FEO88_RS20790	COG2356	endonuclease I
FEO88_RS20795	COG1324	tolerance protein
FEO88_RS20805	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FEO88_RS20815	COG0840	transmembrane signaling receptor activity
FEO88_RS20835	COG4585	Histidine kinase
FEO88_RS20855	COG0583	DNA-binding transcription factor activity
FEO88_RS20865	COG1785	Belongs to the alkaline phosphatase family
FEO88_RS20870	COG1686	Belongs to the peptidase S11 family
FEO88_RS20880	COG2249	NAD(P)H dehydrogenase (quinone) activity
FEO88_RS20900	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FEO88_RS20910	COG0511	ligase activity, forming carbon-carbon bonds
FEO88_RS20915	COG0439	Biotin carboxylase
FEO88_RS20930	COG2264	protein methyltransferase activity
FEO88_RS20940	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FEO88_RS20945	COG4589	Belongs to the CDS family
FEO88_RS20950	COG0204	Acyl-transferase
FEO88_RS20960	COG2453	phosphatase
FEO88_RS20960	COG0671	phosphoesterase, PA-phosphatase related
FEO88_RS20965	COG2267	carboxylic ester hydrolase activity
FEO88_RS20975	COG0138	bifunctional purine biosynthesis protein purh
FEO88_RS20985	COG0151	Belongs to the GarS family
FEO88_RS21015	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEO88_RS21020	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FEO88_RS21025	COG2201	protein-glutamate methylesterase activity
FEO88_RS21030	COG2177	Part of the ABC transporter FtsEX involved in
FEO88_RS21035	COG2884	Cell division ATP-binding protein ftsE
FEO88_RS21045	COG3118	belongs to the thioredoxin family
FEO88_RS21050	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FEO88_RS21055	COG3706	GGDEF domain
FEO88_RS21065	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FEO88_RS21100	COG1652	LysM domain
FEO88_RS21105	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FEO88_RS21105	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FEO88_RS21110	COG1473	amidohydrolase
FEO88_RS21115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FEO88_RS21120	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FEO88_RS21135	COG1289	transmembrane transporter activity
FEO88_RS21140	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS21145	COG2814	Major facilitator Superfamily
FEO88_RS21175	COG0316	Belongs to the HesB IscA family
FEO88_RS21215	COG1051	belongs to the nudix hydrolase family
FEO88_RS21230	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FEO88_RS21235	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FEO88_RS21240	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FEO88_RS21250	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FEO88_RS21255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEO88_RS21260	COG0730	response to heat
FEO88_RS21270	COG0134	indole-3-glycerol-phosphate synthase activity
FEO88_RS21275	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FEO88_RS21290	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FEO88_RS21305	COG1597	lipid kinase activity
FEO88_RS21320	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FEO88_RS21325	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FEO88_RS21335	COG2111	Na H antiporter
FEO88_RS21335	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FEO88_RS21340	COG1006	Multisubunit Na H antiporter MnhC subunit
FEO88_RS21345	COG0651	ATP synthesis coupled electron transport
FEO88_RS21350	COG1863	multisubunit Na H antiporter MnhE subunit
FEO88_RS21355	COG2212	antiporter activity
FEO88_RS21360	COG1320	monovalent cation:proton antiporter activity
FEO88_RS21365	COG0530	calcium, potassium:sodium antiporter activity
FEO88_RS21380	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FEO88_RS21395	COG4804	nuclease activity
FEO88_RS21410	COG3104	oligopeptide transport
FEO88_RS21415	COG3483	tryptophan 2,3-dioxygenase activity
FEO88_RS21460	COG2354	Protein conserved in bacteria
FEO88_RS21475	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FEO88_RS21475	COG3264	Mechanosensitive ion channel
FEO88_RS21495	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FEO88_RS21530	COG1166	arginine decarboxylase activity
FEO88_RS21535	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FEO88_RS21555	COG2960	long-chain fatty acid transporting porin activity
FEO88_RS21615	COG0577	efflux transmembrane transporter activity
FEO88_RS21650	COG0606	chelatase, subunit chli
FEO88_RS21785	COG0582	viral genome integration into host DNA
FEO88_RS21820	COG0561	phosphatase activity
FEO88_RS21825	COG3932	Exopolysaccharide synthesis, ExoD
FEO88_RS21860	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FEO88_RS21865	COG1845	cytochrome c oxidase, subunit III
FEO88_RS21875	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FEO88_RS21880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEO88_RS21895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEO88_RS21900	COG1104	cysteine desulfurase activity
FEO88_RS21920	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FEO88_RS21940	COG2031	fatty acid transporter
FEO88_RS21970	COG0673	inositol 2-dehydrogenase activity
FEO88_RS21980	COG1501	Belongs to the glycosyl hydrolase 31 family
FEO88_RS21985	COG2222	sugar isomerase
FEO88_RS21990	COG1940	carbohydrate kinase activity
FEO88_RS22000	COG1349	DNA-binding transcription factor activity
FEO88_RS22005	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FEO88_RS22010	COG2814	Major facilitator Superfamily
FEO88_RS22025	COG1040	competence protein
FEO88_RS22050	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FEO88_RS22055	COG0156	8-amino-7-oxononanoate synthase activity
FEO88_RS22060	COG2267	carboxylic ester hydrolase activity
FEO88_RS22065	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS22080	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FEO88_RS22095	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FEO88_RS22120	COG0714	Associated with various cellular activities
FEO88_RS22130	COG0754	glutathionylspermidine amidase activity
FEO88_RS22140	COG0129	dihydroxy-acid dehydratase activity
FEO88_RS22145	COG2311	Membrane
FEO88_RS22150	COG1199	ATP-dependent helicase activity
FEO88_RS22160	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FEO88_RS22180	COG3781	membrane
FEO88_RS22210	COG0625	glutathione transferase activity
FEO88_RS22230	COG2207	Transcriptional regulator
FEO88_RS22245	COG4555	ABC transporter
FEO88_RS22275	COG0633	Ferredoxin
FEO88_RS22275	COG0543	2 iron, 2 sulfur cluster binding
FEO88_RS22280	COG1131	(ABC) transporter
FEO88_RS22285	COG0842	Transport permease protein
FEO88_RS22295	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FEO88_RS22305	COG0084	hydrolase, TatD family'
FEO88_RS22310	COG1643	Atp-dependent helicase
FEO88_RS22320	COG1187	pseudouridine synthase activity
FEO88_RS22335	COG0667	Aldo Keto reductase
FEO88_RS22350	COG1690	Belongs to the RtcB family
FEO88_RS22365	COG0840	transmembrane signaling receptor activity
FEO88_RS22370	COG0583	DNA-binding transcription factor activity
FEO88_RS22375	COG2814	Major facilitator Superfamily
FEO88_RS22380	COG0656	L-ascorbic acid biosynthetic process
FEO88_RS22385	COG2267	carboxylic ester hydrolase activity
FEO88_RS22415	COG1042	CoA-binding domain protein
FEO88_RS22415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FEO88_RS22415	COG0045	succinate-CoA ligase (ADP-forming) activity
FEO88_RS22420	COG2239	Acts as a magnesium transporter
FEO88_RS22430	COG0666	response to abiotic stimulus
FEO88_RS22430	COG3177	Filamentation induced by cAMP protein fic
FEO88_RS22435	COG3100	YcgL domain-containing protein
FEO88_RS22445	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FEO88_RS22450	COG1028	Short-chain dehydrogenase reductase Sdr
FEO88_RS22490	COG2986	histidine ammonia-lyase
FEO88_RS22500	COG0463	Glycosyl transferase, family 2
FEO88_RS22515	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FEO88_RS22520	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FEO88_RS22535	COG1294	oxidase, subunit
FEO88_RS22540	COG1271	oxidase subunit
FEO88_RS22560	COG1595	DNA-templated transcription, initiation
FEO88_RS22595	COG0408	coproporphyrinogen oxidase activity
FEO88_RS22600	COG2323	membrane
FEO88_RS22615	COG0589	response to stress
FEO88_RS22630	COG0210	DNA helicase
FEO88_RS22640	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FEO88_RS22650	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FEO88_RS22655	COG1819	glycosyl
FEO88_RS22670	COG0251	oxidation-reduction process
FEO88_RS22710	COG0463	Glycosyl transferase, family 2
FEO88_RS22725	COG1475	DNA binding
FEO88_RS22730	COG1192	Involved in chromosome partitioning
FEO88_RS22735	COG0357	Ribosomal RNA small subunit methyltransferase G
FEO88_RS22740	COG2091	lysine biosynthetic process via aminoadipic acid
FEO88_RS22795	COG1971	Probably functions as a manganese efflux pump
FEO88_RS22800	COG2205	protein histidine kinase activity
FEO88_RS22800	COG0784	Response regulator, receiver
FEO88_RS22810	COG2911	Protein conserved in bacteria
FEO88_RS22815	COG0729	surface antigen
FEO88_RS22825	COG0752	glycyl-tRNA synthetase alpha subunit
FEO88_RS22830	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FEO88_RS22835	COG0519	Catalyzes the synthesis of GMP from XMP
FEO88_RS22835	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FEO88_RS22845	COG0805	protein transport
FEO88_RS22855	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FEO88_RS22865	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FEO88_RS22875	COG0840	transmembrane signaling receptor activity
FEO88_RS22935	COG3135	benzoate transporter
FEO88_RS22950	COG2951	lytic endotransglycosylase activity
FEO88_RS22955	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FEO88_RS22965	COG3706	GGDEF domain
FEO88_RS22995	COG0302	gtp cyclohydrolase
FEO88_RS23010	COG1566	PFAM secretion protein HlyD family protein
FEO88_RS23020	COG1289	transmembrane transporter activity
FEO88_RS23030	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FEO88_RS23035	COG1074	ATP-dependent DNA helicase activity
FEO88_RS23040	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FEO88_RS23045	COG1127	ABC transporter
FEO88_RS23050	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FEO88_RS23055	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FEO88_RS23075	COG0386	Belongs to the glutathione peroxidase family
FEO88_RS23085	COG1322	Protein conserved in bacteria
FEO88_RS23095	COG0604	alcohol dehydrogenase
FEO88_RS23100	COG0583	DNA-binding transcription factor activity
FEO88_RS23120	COG0531	amino acid
FEO88_RS23130	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FEO88_RS23135	COG0861	Integral membrane protein TerC family
FEO88_RS23145	COG0584	glycerophosphoryl diester phosphodiesterase
FEO88_RS23160	COG0706	membrane insertase activity
FEO88_RS23165	COG0594	ribonuclease P activity
FEO88_RS23170	COG0230	Belongs to the bacterial ribosomal protein bL34 family