locus-tag class description SMAL_RS00005 PF11638 DnaA N-terminal domain SMAL_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SMAL_RS00005 PF00308 Bacterial dnaA protein SMAL_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SMAL_RS00010 PF02767 DNA polymerase III beta subunit, central domain SMAL_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SMAL_RS00015 PF02463 RecF/RecN/SMC N terminal domain SMAL_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus SMAL_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS00020 PF01751 Toprim domain SMAL_RS00020 PF00204 DNA gyrase B SMAL_RS00020 PF18053 DNA gyrase B subunit insert domain SMAL_RS00025 PF02517 CPBP intramembrane metalloprotease SMAL_RS00030 PF01435 Peptidase family M48 SMAL_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal SMAL_RS00045 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS00050 PF02472 Biopolymer transport protein ExbD/TolR SMAL_RS00055 PF02472 Biopolymer transport protein ExbD/TolR SMAL_RS00060 PF13396 Phospholipase_D-nuclease N-terminal SMAL_RS00060 PF13091 PLD-like domain SMAL_RS00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SMAL_RS00075 PF04055 Radical SAM superfamily SMAL_RS00100 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SMAL_RS00105 PF00155 Aminotransferase class I and II SMAL_RS00110 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS00110 PF00593 TonB dependent receptor SMAL_RS00125 PF02735 Ku70/Ku80 beta-barrel domain SMAL_RS00130 PF01068 ATP dependent DNA ligase domain SMAL_RS00130 PF04679 ATP dependent DNA ligase C terminal region SMAL_RS00130 PF13298 DNA polymerase Ligase (LigD) SMAL_RS00140 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS00140 PF00107 Zinc-binding dehydrogenase SMAL_RS00145 PF01081 KDPG and KHG aldolase SMAL_RS00155 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS00160 PF00351 Biopterin-dependent aromatic amino acid hydroxylase SMAL_RS00165 PF01037 Lrp/AsnC ligand binding domain SMAL_RS00175 PF01734 Patatin-like phospholipase SMAL_RS00185 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS00185 PF00593 TonB dependent receptor SMAL_RS00190 PF01569 PAP2 superfamily SMAL_RS00205 PF00005 ABC transporter SMAL_RS00225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMAL_RS00225 PF06827 Zinc finger found in FPG and IleRS SMAL_RS00225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMAL_RS00230 PF04349 Periplasmic glucan biosynthesis protein, MdoG SMAL_RS00235 PF00265 Thymidine kinase SMAL_RS00250 PF13361 UvrD-like helicase C-terminal domain SMAL_RS00250 PF00580 UvrD/REP helicase N-terminal domain SMAL_RS00260 PF04337 Protein of unknown function, DUF480 SMAL_RS00265 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SMAL_RS00270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMAL_RS00280 PF01553 Acyltransferase SMAL_RS00290 PF01171 PP-loop family SMAL_RS00295 PF04381 Putative exonuclease, RdgC SMAL_RS00305 PF02142 MGS-like domain SMAL_RS00310 PF00072 Response regulator receiver domain SMAL_RS00310 PF01627 Hpt domain SMAL_RS00310 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS00310 PF00672 HAMP domain SMAL_RS00310 PF17149 Periplasmic sensor domain found in signal transduction proteins SMAL_RS00315 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS00315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMAL_RS00320 PF01645 Conserved region in glutamate synthase SMAL_RS00320 PF01493 GXGXG motif SMAL_RS00320 PF00310 Glutamine amidotransferases class-II SMAL_RS00320 PF04898 Glutamate synthase central domain SMAL_RS00355 PF00144 Beta-lactamase SMAL_RS00360 PF02311 AraC-like ligand binding domain SMAL_RS00360 PF12833 Helix-turn-helix domain SMAL_RS00370 PF07690 Major Facilitator Superfamily SMAL_RS00375 PF00593 TonB dependent receptor SMAL_RS00375 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS00400 PF00271 Helicase conserved C-terminal domain SMAL_RS00400 PF09369 Domain of unknown function (DUF1998) SMAL_RS00400 PF00270 DEAD/DEAH box helicase SMAL_RS00430 PF01882 Protein of unknown function DUF58 SMAL_RS00435 PF07726 ATPase family associated with various cellular activities (AAA) SMAL_RS00435 PF17863 AAA lid domain SMAL_RS00455 PF01523 Putative modulator of DNA gyrase SMAL_RS00465 PF07804 HipA-like C-terminal domain SMAL_RS00465 PF13657 HipA N-terminal domain SMAL_RS00485 PF01434 Peptidase family M41 SMAL_RS00485 PF17862 AAA+ lid domain SMAL_RS00485 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS00505 PF13091 PLD-like domain SMAL_RS00510 PF03061 Thioesterase superfamily SMAL_RS00540 PF02673 Bacitracin resistance protein BacA SMAL_RS00545 PF00120 Glutamine synthetase, catalytic domain SMAL_RS00545 PF03951 Glutamine synthetase, beta-Grasp domain SMAL_RS00550 PF00543 Nitrogen regulatory protein P-II SMAL_RS00555 PF00909 Ammonium Transporter Family SMAL_RS00560 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SMAL_RS00560 PF08479 POTRA domain, ShlB-type SMAL_RS00560 PF17287 POTRA domain SMAL_RS00565 PF05860 haemagglutination activity domain SMAL_RS00565 PF04829 Pre-toxin domain with VENN motif SMAL_RS00565 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS00565 PF13332 Hemagglutinin repeat SMAL_RS00565 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS00565 PF05860 haemagglutination activity domain SMAL_RS00565 PF13332 Hemagglutinin repeat SMAL_RS00565 PF04829 Pre-toxin domain with VENN motif SMAL_RS00580 PF00072 Response regulator receiver domain SMAL_RS00580 PF04397 LytTr DNA-binding domain SMAL_RS00595 PF06725 3D domain SMAL_RS00595 PF03562 MltA specific insert domain SMAL_RS00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS00610 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS00610 PF00989 PAS fold SMAL_RS00615 PF00072 Response regulator receiver domain SMAL_RS00615 PF00158 Sigma-54 interaction domain SMAL_RS00615 PF02954 Bacterial regulatory protein, Fis family SMAL_RS00620 PF00080 Copper/zinc superoxide dismutase (SODC) SMAL_RS00625 PF00080 Copper/zinc superoxide dismutase (SODC) SMAL_RS00640 PF00108 Thiolase, N-terminal domain SMAL_RS00640 PF02803 Thiolase, C-terminal domain SMAL_RS00675 PF02556 Preprotein translocase subunit SecB SMAL_RS00680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMAL_RS00680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMAL_RS00695 PF13657 HipA N-terminal domain SMAL_RS00695 PF07804 HipA-like C-terminal domain SMAL_RS00725 PF12833 Helix-turn-helix domain SMAL_RS00735 PF04261 Dyp-type peroxidase family SMAL_RS00780 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS00780 PF00072 Response regulator receiver domain SMAL_RS00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS00785 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMAL_RS00785 PF00989 PAS fold SMAL_RS00785 PF00072 Response regulator receiver domain SMAL_RS00785 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS00785 PF01627 Hpt domain SMAL_RS00800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMAL_RS00800 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS00800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS00805 PF03466 LysR substrate binding domain SMAL_RS00815 PF14552 Tautomerase enzyme SMAL_RS00820 PF00588 SpoU rRNA Methylase family SMAL_RS00830 PF00675 Insulinase (Peptidase family M16) SMAL_RS00830 PF05193 Peptidase M16 inactive domain SMAL_RS00840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMAL_RS00840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMAL_RS00845 PF00561 alpha/beta hydrolase fold SMAL_RS00855 PF00501 AMP-binding enzyme SMAL_RS00860 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family SMAL_RS00870 PF01820 D-ala D-ala ligase N-terminus SMAL_RS00870 PF07478 D-ala D-ala ligase C-terminus SMAL_RS00880 PF03109 ABC1 family SMAL_RS00885 PF01596 O-methyltransferase SMAL_RS00890 PF00849 RNA pseudouridylate synthase SMAL_RS00900 PF00472 RF-1 domain SMAL_RS00910 PF01432 Peptidase family M3 SMAL_RS00925 PF10502 Signal peptidase, peptidase S26 SMAL_RS00930 PF07690 Major Facilitator Superfamily SMAL_RS00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS00935 PF03466 LysR substrate binding domain SMAL_RS00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS00940 PF03466 LysR substrate binding domain SMAL_RS00945 PF01274 Malate synthase SMAL_RS00950 PF00463 Isocitrate lyase family SMAL_RS00955 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS00990 PF02785 Biotin carboxylase C-terminal domain SMAL_RS00990 PF00289 Biotin carboxylase, N-terminal domain SMAL_RS00990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMAL_RS00990 PF00364 Biotin-requiring enzyme SMAL_RS00995 PF01039 Carboxyl transferase domain SMAL_RS01000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMAL_RS01000 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS01000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS01030 PF03969 AFG1-like ATPase SMAL_RS01040 PF03477 ATP cone domain SMAL_RS01040 PF02867 Ribonucleotide reductase, barrel domain SMAL_RS01040 PF00317 Ribonucleotide reductase, all-alpha domain SMAL_RS01045 PF00268 Ribonucleotide reductase, small chain SMAL_RS01050 PF01810 LysE type translocator SMAL_RS01055 PF03061 Thioesterase superfamily SMAL_RS01060 PF02146 Sir2 family SMAL_RS01065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMAL_RS01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS01070 PF03466 LysR substrate binding domain SMAL_RS01075 PF00551 Formyl transferase SMAL_RS01080 PF00857 Isochorismatase family SMAL_RS01085 PF02677 Epoxyqueuosine reductase QueH SMAL_RS01090 PF01734 Patatin-like phospholipase SMAL_RS01100 PF01381 Helix-turn-helix SMAL_RS01100 PF06114 IrrE N-terminal-like domain SMAL_RS01100 PF09856 Predicted transcriptional regulator (DUF2083) SMAL_RS01105 PF00171 Aldehyde dehydrogenase family SMAL_RS01110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMAL_RS01110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS01110 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS01115 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS01120 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS01125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMAL_RS01125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMAL_RS01130 PF02566 OsmC-like protein SMAL_RS01140 PF00916 Sulfate permease family SMAL_RS01140 PF01740 STAS domain SMAL_RS01145 PF01207 Dihydrouridine synthase (Dus) SMAL_RS01155 PF00072 Response regulator receiver domain SMAL_RS01155 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS01165 PF06167 Glucose-regulated metallo-peptidase M90 SMAL_RS01175 PF02237 Biotin protein ligase C terminal domain SMAL_RS01175 PF08279 HTH domain SMAL_RS01175 PF03099 Biotin/lipoate A/B protein ligase family SMAL_RS01180 PF03309 Type III pantothenate kinase SMAL_RS01195 PF05973 Phage derived protein Gp49-like (DUF891) SMAL_RS01210 PF00491 Arginase family SMAL_RS01220 PF05532 CsbD-like SMAL_RS01230 PF00579 tRNA synthetases class I (W and Y) SMAL_RS01240 PF00753 Metallo-beta-lactamase superfamily SMAL_RS01255 PF00083 Sugar (and other) transporter SMAL_RS01260 PF00892 EamA-like transporter family SMAL_RS01265 PF00892 EamA-like transporter family SMAL_RS01270 PF00593 TonB dependent receptor SMAL_RS01270 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS01275 PF00005 ABC transporter SMAL_RS01275 PF02687 FtsX-like permease family SMAL_RS01275 PF12704 MacB-like periplasmic core domain SMAL_RS01285 PF00005 ABC transporter SMAL_RS01290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS01295 PF00005 ABC transporter SMAL_RS01305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS01305 PF07730 Histidine kinase SMAL_RS01310 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS01310 PF00072 Response regulator receiver domain SMAL_RS01325 PF00883 Cytosol aminopeptidase family, catalytic domain SMAL_RS01325 PF02789 Cytosol aminopeptidase family, N-terminal domain SMAL_RS01330 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS01335 PF01594 AI-2E family transporter SMAL_RS01355 PF00595 PDZ domain SMAL_RS01370 PF07237 Protein of unknown function (DUF1428) SMAL_RS01380 PF00072 Response regulator receiver domain SMAL_RS01380 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS01395 PF07690 Major Facilitator Superfamily SMAL_RS01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS01400 PF03466 LysR substrate binding domain SMAL_RS01405 PF07308 Protein of unknown function (DUF1456) SMAL_RS01410 PF00106 short chain dehydrogenase SMAL_RS01420 PF05746 DALR anticodon binding domain SMAL_RS01420 PF03485 Arginyl tRNA synthetase N terminal domain SMAL_RS01420 PF00750 tRNA synthetases class I (R) SMAL_RS01425 PF04002 RadC-like JAB domain SMAL_RS01435 PF00072 Response regulator receiver domain SMAL_RS01435 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS01440 PF02441 Flavoprotein SMAL_RS01440 PF04127 DNA / pantothenate metabolism flavoprotein SMAL_RS01445 PF00692 dUTPase SMAL_RS01450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMAL_RS01450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMAL_RS01450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMAL_RS01450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMAL_RS01455 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS01455 PF00072 Response regulator receiver domain SMAL_RS01460 PF02702 Osmosensitive K+ channel His kinase sensor domain SMAL_RS01460 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS01460 PF13492 GAF domain SMAL_RS01460 PF13493 Domain of unknown function (DUF4118) SMAL_RS01465 PF02669 K+-transporting ATPase, c chain SMAL_RS01475 PF03814 Potassium-transporting ATPase A subunit SMAL_RS01490 PF00156 Phosphoribosyl transferase domain SMAL_RS01495 PF03372 Endonuclease/Exonuclease/phosphatase family SMAL_RS01500 PF07690 Major Facilitator Superfamily SMAL_RS01510 PF03702 Anhydro-N-acetylmuramic acid kinase SMAL_RS01515 PF04225 Opacity-associated protein A LysM-like domain SMAL_RS01515 PF01551 Peptidase family M23 SMAL_RS01520 PF00579 tRNA synthetases class I (W and Y) SMAL_RS01580 PF04389 Peptidase family M28 SMAL_RS01590 PF01551 Peptidase family M23 SMAL_RS01595 PF03572 Peptidase family S41 SMAL_RS01595 PF13180 PDZ domain SMAL_RS01605 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SMAL_RS01610 PF04973 Nicotinamide mononucleotide transporter SMAL_RS01615 PF01619 Proline dehydrogenase SMAL_RS01615 PF00171 Aldehyde dehydrogenase family SMAL_RS01615 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SMAL_RS01615 PF14850 DNA-binding domain of Proline dehydrogenase SMAL_RS01625 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SMAL_RS01625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SMAL_RS01630 PF00115 Cytochrome C and Quinol oxidase polypeptide I SMAL_RS01640 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SMAL_RS01645 PF00510 Cytochrome c oxidase subunit III SMAL_RS01670 PF01040 UbiA prenyltransferase family SMAL_RS01680 PF13593 SBF-like CPA transporter family (DUF4137) SMAL_RS01690 PF08278 DNA primase DnaG DnaB-binding SMAL_RS01690 PF10410 DnaB-helicase binding domain of primase SMAL_RS01690 PF01807 CHC2 zinc finger SMAL_RS01690 PF08275 DNA primase catalytic core, N-terminal domain SMAL_RS01695 PF03631 Virulence factor BrkB SMAL_RS01705 PF01165 Ribosomal protein S21 SMAL_RS01710 PF00814 Glycoprotease family SMAL_RS01720 PF02152 Dihydroneopterin aldolase SMAL_RS01725 PF00924 Mechanosensitive ion channel SMAL_RS01730 PF14310 Fibronectin type III-like domain SMAL_RS01730 PF00933 Glycosyl hydrolase family 3 N terminal domain SMAL_RS01730 PF01915 Glycosyl hydrolase family 3 C-terminal domain SMAL_RS01740 PF07995 Glucose / Sorbosone dehydrogenase SMAL_RS01745 PF05360 yiaA/B two helix domain SMAL_RS01755 PF13520 Amino acid permease SMAL_RS01765 PF01380 SIS domain SMAL_RS01765 PF01418 Helix-turn-helix domain, rpiR family SMAL_RS01770 PF13378 Enolase C-terminal domain-like SMAL_RS01770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SMAL_RS01785 PF00593 TonB dependent receptor SMAL_RS01795 PF01427 D-ala-D-ala dipeptidase SMAL_RS01820 PF07063 Domain of unknown function (DUF1338) SMAL_RS01825 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SMAL_RS01825 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SMAL_RS01830 PF08335 GlnD PII-uridylyltransferase SMAL_RS01830 PF03710 Glutamate-ammonia ligase adenylyltransferase SMAL_RS01835 PF02592 Putative vitamin uptake transporter SMAL_RS01865 PF00881 Nitroreductase family SMAL_RS01870 PF04264 YceI-like domain SMAL_RS01880 PF00665 Integrase core domain SMAL_RS01890 PF04954 Siderophore-interacting protein SMAL_RS01890 PF08021 Siderophore-interacting FAD-binding domain SMAL_RS01895 PF03551 Transcriptional regulator PadR-like family SMAL_RS01900 PF00456 Transketolase, thiamine diphosphate binding domain SMAL_RS01900 PF17831 Pyruvate dehydrogenase E1 component middle domain SMAL_RS01940 PF00350 Dynamin family SMAL_RS01955 PF00271 Helicase conserved C-terminal domain SMAL_RS01955 PF00176 SNF2 family N-terminal domain SMAL_RS02005 PF00561 alpha/beta hydrolase fold SMAL_RS02045 PF01545 Cation efflux family SMAL_RS02045 PF16916 Dimerisation domain of Zinc Transporter SMAL_RS02050 PF02583 Metal-sensitive transcriptional repressor SMAL_RS02060 PF02492 CobW/HypB/UreG, nucleotide-binding domain SMAL_RS02060 PF07683 Cobalamin synthesis protein cobW C-terminal domain SMAL_RS02065 PF12848 ABC transporter SMAL_RS02065 PF00005 ABC transporter SMAL_RS02070 PF03466 LysR substrate binding domain SMAL_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS02075 PF00144 Beta-lactamase SMAL_RS02080 PF07690 Major Facilitator Superfamily SMAL_RS02085 PF12792 CSS motif domain associated with EAL SMAL_RS02085 PF00563 EAL domain SMAL_RS02090 PF00324 Amino acid permease SMAL_RS02095 PF01464 Transglycosylase SLT domain SMAL_RS02120 PF06983 3-demethylubiquinone-9 3-methyltransferase SMAL_RS02130 PF07237 Protein of unknown function (DUF1428) SMAL_RS02135 PF04542 Sigma-70 region 2 SMAL_RS02135 PF08281 Sigma-70, region 4 SMAL_RS02165 PF06580 Histidine kinase SMAL_RS02165 PF07694 5TMR of 5TMR-LYT SMAL_RS02170 PF00072 Response regulator receiver domain SMAL_RS02170 PF04397 LytTr DNA-binding domain SMAL_RS02190 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS02200 PF07690 Major Facilitator Superfamily SMAL_RS02205 PF01431 Peptidase family M13 SMAL_RS02205 PF05649 Peptidase family M13 SMAL_RS02210 PF08448 PAS fold SMAL_RS02210 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS02210 PF08447 PAS fold SMAL_RS02210 PF00563 EAL domain SMAL_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS02215 PF03466 LysR substrate binding domain SMAL_RS02225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SMAL_RS02230 PF00999 Sodium/hydrogen exchanger family SMAL_RS02255 PF00691 OmpA family SMAL_RS02255 PF13677 Membrane MotB of proton-channel complex MotA/MotB SMAL_RS02260 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS02265 PF01641 SelR domain SMAL_RS02280 PF01037 Lrp/AsnC ligand binding domain SMAL_RS02285 PF01266 FAD dependent oxidoreductase SMAL_RS02290 PF00842 Alanine racemase, C-terminal domain SMAL_RS02290 PF01168 Alanine racemase, N-terminal domain SMAL_RS02300 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS02315 PF08468 Methyltransferase small domain N-terminal SMAL_RS02315 PF05175 Methyltransferase small domain SMAL_RS02320 PF00849 RNA pseudouridylate synthase SMAL_RS02320 PF01479 S4 domain SMAL_RS02325 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS02330 PF00109 Beta-ketoacyl synthase, N-terminal domain SMAL_RS02330 PF02801 Beta-ketoacyl synthase, C-terminal domain SMAL_RS02335 PF07977 FabA-like domain SMAL_RS02340 PF11798 IMS family HHH motif SMAL_RS02340 PF11799 impB/mucB/samB family C-terminal domain SMAL_RS02340 PF00817 impB/mucB/samB family SMAL_RS02355 PF03466 LysR substrate binding domain SMAL_RS02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS02360 PF08241 Methyltransferase domain SMAL_RS02365 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS02370 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS02370 PF00593 TonB dependent receptor SMAL_RS02385 PF13185 GAF domain SMAL_RS02395 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS02395 PF00155 Aminotransferase class I and II SMAL_RS02400 PF01625 Peptide methionine sulfoxide reductase SMAL_RS02405 PF17991 Thioredoxin like C-terminal domain SMAL_RS02405 PF00578 AhpC/TSA family SMAL_RS02405 PF02683 Cytochrome C biogenesis protein transmembrane region SMAL_RS02410 PF01641 SelR domain SMAL_RS02415 PF00072 Response regulator receiver domain SMAL_RS02415 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS02420 PF08448 PAS fold SMAL_RS02420 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB SMAL_RS02420 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS02420 PF00672 HAMP domain SMAL_RS02425 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS02425 PF00672 HAMP domain SMAL_RS02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS02430 PF00072 Response regulator receiver domain SMAL_RS02430 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS02435 PF13537 Glutamine amidotransferase domain SMAL_RS02435 PF00733 Asparagine synthase SMAL_RS02445 PF01242 6-pyruvoyl tetrahydropterin synthase SMAL_RS02450 PF00593 TonB dependent receptor SMAL_RS02450 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS02460 PF01548 Transposase SMAL_RS02460 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS02465 PF00270 DEAD/DEAH box helicase SMAL_RS02465 PF00271 Helicase conserved C-terminal domain SMAL_RS02475 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS02475 PF14497 Glutathione S-transferase, C-terminal domain SMAL_RS02480 PF00437 Type II/IV secretion system protein SMAL_RS02500 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS02500 PF00571 CBS domain SMAL_RS02505 PF01053 Cys/Met metabolism PLP-dependent enzyme SMAL_RS02510 PF01061 ABC-2 type transporter SMAL_RS02515 PF00005 ABC transporter SMAL_RS02530 PF00535 Glycosyl transferase family 2 SMAL_RS02550 PF00106 short chain dehydrogenase SMAL_RS02555 PF01565 FAD binding domain SMAL_RS02555 PF04030 D-arabinono-1,4-lactone oxidase SMAL_RS02560 PF01040 UbiA prenyltransferase family SMAL_RS02565 PF01012 Electron transfer flavoprotein domain SMAL_RS02565 PF00766 Electron transfer flavoprotein FAD-binding domain SMAL_RS02570 PF01012 Electron transfer flavoprotein domain SMAL_RS02575 PF16363 GDP-mannose 4,6 dehydratase SMAL_RS02580 PF00483 Nucleotidyl transferase SMAL_RS02585 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SMAL_RS02590 PF04321 RmlD substrate binding domain SMAL_RS02595 PF01380 SIS domain SMAL_RS02600 PF00483 Nucleotidyl transferase SMAL_RS02600 PF01050 Mannose-6-phosphate isomerase SMAL_RS02605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMAL_RS02605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMAL_RS02605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMAL_RS02605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMAL_RS02610 PF01370 NAD dependent epimerase/dehydratase family SMAL_RS02640 PF00271 Helicase conserved C-terminal domain SMAL_RS02640 PF00176 SNF2 family N-terminal domain SMAL_RS02640 PF12419 SNF2 Helicase protein SMAL_RS02645 PF01144 Coenzyme A transferase SMAL_RS02650 PF01144 Coenzyme A transferase SMAL_RS02655 PF14307 Glycosyltransferase WbsX SMAL_RS02655 PF05045 Rhamnan synthesis protein F SMAL_RS02675 PF00005 ABC transporter SMAL_RS02680 PF02405 Permease MlaE SMAL_RS02690 PF00816 H-NS histone family SMAL_RS02695 PF03129 Anticodon binding domain SMAL_RS02695 PF04073 Aminoacyl-tRNA editing domain SMAL_RS02695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMAL_RS02705 PF01066 CDP-alcohol phosphatidyltransferase SMAL_RS02715 PF00583 Acetyltransferase (GNAT) family SMAL_RS02725 PF00133 tRNA synthetases class I (I, L, M and V) SMAL_RS02725 PF08264 Anticodon-binding domain of tRNA SMAL_RS02725 PF10458 Valyl tRNA synthetase tRNA binding arm SMAL_RS02740 PF02789 Cytosol aminopeptidase family, N-terminal domain SMAL_RS02740 PF00883 Cytosol aminopeptidase family, catalytic domain SMAL_RS02750 PF03739 Lipopolysaccharide export system permease LptF/LptG SMAL_RS02760 PF02899 Phage integrase, N-terminal SAM-like domain SMAL_RS02760 PF00589 Phage integrase family SMAL_RS02765 PF10411 Disulfide bond isomerase protein N-terminus SMAL_RS02765 PF13098 Thioredoxin-like domain SMAL_RS02770 PF00553 Cellulose binding domain SMAL_RS02770 PF00041 Fibronectin type III domain SMAL_RS02770 PF00704 Glycosyl hydrolases family 18 SMAL_RS02775 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SMAL_RS02775 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SMAL_RS02775 PF02769 AIR synthase related protein, C-terminal domain SMAL_RS02780 PF03895 YadA-like membrane anchor domain SMAL_RS02780 PF05662 Coiled stalk of trimeric autotransporter adhesin SMAL_RS02780 PF05658 Head domain of trimeric autotransporter adhesin SMAL_RS02780 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS02785 PF00082 Subtilase family SMAL_RS02785 PF04151 Bacterial pre-peptidase C-terminal domain SMAL_RS02790 PF00437 Type II/IV secretion system protein SMAL_RS02790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SMAL_RS02795 PF00482 Type II secretion system (T2SS), protein F SMAL_RS02800 PF08334 Type II secretion system (T2SS), protein G SMAL_RS02805 PF12019 Type II transport protein GspH SMAL_RS02810 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS02820 PF03934 Type II secretion system (T2SS), protein K SMAL_RS02825 PF05137 Fimbrial assembly protein (PilN) SMAL_RS02830 PF10741 Type II secretion system (T2SS), protein M subtype b SMAL_RS02840 PF03958 Bacterial type II/III secretion system short domain SMAL_RS02840 PF00263 Bacterial type II and III secretion system protein SMAL_RS02855 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SMAL_RS02855 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SMAL_RS02865 PF16970 Type-1 fimbrial protein, A SMAL_RS02870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SMAL_RS02870 PF02753 Pili assembly chaperone PapD, C-terminal domain SMAL_RS02875 PF00577 Outer membrane usher protein SMAL_RS02875 PF13954 PapC N-terminal domain SMAL_RS02875 PF13953 PapC C-terminal domain SMAL_RS02885 PF02350 UDP-N-acetylglucosamine 2-epimerase SMAL_RS02895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SMAL_RS02895 PF13632 Glycosyl transferase family group 2 SMAL_RS02910 PF00860 Permease family SMAL_RS02915 PF00005 ABC transporter SMAL_RS02915 PF12848 ABC transporter SMAL_RS02925 PF00464 Serine hydroxymethyltransferase SMAL_RS02940 PF03477 ATP cone domain SMAL_RS02945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMAL_RS02945 PF01872 RibD C-terminal domain SMAL_RS02965 PF00677 Lumazine binding domain SMAL_RS02970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SMAL_RS02970 PF00925 GTP cyclohydrolase II SMAL_RS02975 PF00885 6,7-dimethyl-8-ribityllumazine synthase SMAL_RS02980 PF01029 NusB family SMAL_RS02985 PF02769 AIR synthase related protein, C-terminal domain SMAL_RS02985 PF00586 AIR synthase related protein, N-terminal domain SMAL_RS02995 PF01565 FAD binding domain SMAL_RS02995 PF02913 FAD linked oxidases, C-terminal domain SMAL_RS03000 PF04307 LexA-binding, inner membrane-associated putative hydrolase SMAL_RS03005 PF02021 Uncharacterised protein family UPF0102 SMAL_RS03015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMAL_RS03030 PF02381 MraZ protein, putative antitoxin-like SMAL_RS03035 PF01795 MraW methylase family SMAL_RS03040 PF04999 Cell division protein FtsL SMAL_RS03045 PF03717 Penicillin-binding Protein dimerisation domain SMAL_RS03045 PF00905 Penicillin binding protein transpeptidase domain SMAL_RS03050 PF02875 Mur ligase family, glutamate ligase domain SMAL_RS03050 PF01225 Mur ligase family, catalytic domain SMAL_RS03050 PF08245 Mur ligase middle domain SMAL_RS03055 PF02875 Mur ligase family, glutamate ligase domain SMAL_RS03055 PF08245 Mur ligase middle domain SMAL_RS03055 PF01225 Mur ligase family, catalytic domain SMAL_RS03060 PF00953 Glycosyl transferase family 4 SMAL_RS03065 PF01098 Cell cycle protein SMAL_RS03070 PF04101 Glycosyltransferase family 28 C-terminal domain SMAL_RS03070 PF03033 Glycosyltransferase family 28 N-terminal domain SMAL_RS03075 PF08245 Mur ligase middle domain SMAL_RS03075 PF01225 Mur ligase family, catalytic domain SMAL_RS03075 PF02875 Mur ligase family, glutamate ligase domain SMAL_RS03080 PF01820 D-ala D-ala ligase N-terminus SMAL_RS03080 PF07478 D-ala D-ala ligase C-terminus SMAL_RS03085 PF08478 POTRA domain, FtsQ-type SMAL_RS03085 PF03799 Cell division protein FtsQ SMAL_RS03090 PF02491 SHS2 domain inserted in FTSA SMAL_RS03095 PF00091 Tubulin/FtsZ family, GTPase domain SMAL_RS03095 PF12327 FtsZ family, C-terminal domain SMAL_RS03100 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SMAL_RS03110 PF08525 Opacity-associated protein A N-terminal motif SMAL_RS03110 PF01476 LysM domain SMAL_RS03110 PF01551 Peptidase family M23 SMAL_RS03115 PF01043 SecA preprotein cross-linking domain SMAL_RS03115 PF02810 SEC-C motif SMAL_RS03115 PF07516 SecA Wing and Scaffold domain SMAL_RS03115 PF07517 SecA DEAD-like domain SMAL_RS03120 PF00293 NUDIX domain SMAL_RS03130 PF02219 Methylenetetrahydrofolate reductase SMAL_RS03135 PF00561 alpha/beta hydrolase fold SMAL_RS03140 PF06580 Histidine kinase SMAL_RS03140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS03140 PF07694 5TMR of 5TMR-LYT SMAL_RS03145 PF04397 LytTr DNA-binding domain SMAL_RS03145 PF00072 Response regulator receiver domain SMAL_RS03150 PF01979 Amidohydrolase family SMAL_RS03155 PF00672 HAMP domain SMAL_RS03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS03155 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS03160 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS03160 PF00072 Response regulator receiver domain SMAL_RS03185 PF04073 Aminoacyl-tRNA editing domain SMAL_RS03190 PF05221 S-adenosyl-L-homocysteine hydrolase SMAL_RS03190 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SMAL_RS03200 PF00311 Phosphoenolpyruvate carboxylase SMAL_RS03205 PF03061 Thioesterase superfamily SMAL_RS03210 PF02772 S-adenosylmethionine synthetase, central domain SMAL_RS03210 PF02773 S-adenosylmethionine synthetase, C-terminal domain SMAL_RS03210 PF00438 S-adenosylmethionine synthetase, N-terminal domain SMAL_RS03240 PF13847 Methyltransferase domain SMAL_RS03245 PF01207 Dihydrouridine synthase (Dus) SMAL_RS03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS03255 PF03466 LysR substrate binding domain SMAL_RS03260 PF07690 Major Facilitator Superfamily SMAL_RS03265 PF00294 pfkB family carbohydrate kinase SMAL_RS03270 PF01773 Na+ dependent nucleoside transporter N-terminus SMAL_RS03270 PF07670 Nucleoside recognition SMAL_RS03270 PF07662 Na+ dependent nucleoside transporter C-terminus SMAL_RS03275 PF00248 Aldo/keto reductase family SMAL_RS03285 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS03285 PF00593 TonB dependent receptor SMAL_RS03310 PF00005 ABC transporter SMAL_RS03315 PF13472 GDSL-like Lipase/Acylhydrolase family SMAL_RS03320 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS03320 PF00072 Response regulator receiver domain SMAL_RS03325 PF08521 Two-component sensor kinase N-terminal SMAL_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS03325 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS03335 PF01219 Prokaryotic diacylglycerol kinase SMAL_RS03340 PF03741 Integral membrane protein TerC family SMAL_RS03345 PF07690 Major Facilitator Superfamily SMAL_RS03350 PF04011 LemA family SMAL_RS03365 PF01790 Prolipoprotein diacylglyceryl transferase SMAL_RS03370 PF00303 Thymidylate synthase SMAL_RS03380 PF00186 Dihydrofolate reductase SMAL_RS03385 PF06940 Domain of unknown function (DUF1287) SMAL_RS03390 PF00149 Calcineurin-like phosphoesterase SMAL_RS03395 PF04379 ApaG domain SMAL_RS03400 PF00398 Ribosomal RNA adenine dimethylase SMAL_RS03405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SMAL_RS03410 PF09312 SurA N-terminal domain SMAL_RS03410 PF00639 PPIC-type PPIASE domain SMAL_RS03415 PF04453 LPS transport system D SMAL_RS03415 PF03968 OstA-like protein SMAL_RS03420 PF00850 Histone deacetylase domain SMAL_RS03425 PF01923 Cobalamin adenosyltransferase SMAL_RS03435 PF01494 FAD binding domain SMAL_RS03440 PF01494 FAD binding domain SMAL_RS03445 PF00923 Transaldolase/Fructose-6-phosphate aldolase SMAL_RS03445 PF13202 EF hand SMAL_RS03450 PF01728 FtsJ-like methyltransferase SMAL_RS03450 PF18125 RlmM ferredoxin-like domain SMAL_RS03470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SMAL_RS03470 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMAL_RS03480 PF01625 Peptide methionine sulfoxide reductase SMAL_RS03485 PF00923 Transaldolase/Fructose-6-phosphate aldolase SMAL_RS03490 PF14760 Rnk N-terminus SMAL_RS03490 PF01272 Transcription elongation factor, GreA/GreB, C-term SMAL_RS03495 PF03466 LysR substrate binding domain SMAL_RS03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS03500 PF13192 Thioredoxin domain SMAL_RS03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS03505 PF10417 C-terminal domain of 1-Cys peroxiredoxin SMAL_RS03505 PF00578 AhpC/TSA family SMAL_RS03510 PF17827 PrmC N-terminal domain SMAL_RS03510 PF05175 Methyltransferase small domain SMAL_RS03515 PF00561 alpha/beta hydrolase fold SMAL_RS03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS03520 PF03466 LysR substrate binding domain SMAL_RS03525 PF07690 Major Facilitator Superfamily SMAL_RS03540 PF00293 NUDIX domain SMAL_RS03545 PF01612 3'-5' exonuclease SMAL_RS03545 PF00476 DNA polymerase family A SMAL_RS03545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMAL_RS03545 PF01367 5'-3' exonuclease, C-terminal SAM fold SMAL_RS03560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SMAL_RS03560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SMAL_RS03560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SMAL_RS03580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SMAL_RS03585 PF02233 NAD(P) transhydrogenase beta subunit SMAL_RS03595 PF01883 Iron-sulfur cluster assembly protein SMAL_RS03600 PF01063 Amino-transferase class IV SMAL_RS03620 PF00082 Subtilase family SMAL_RS03620 PF04151 Bacterial pre-peptidase C-terminal domain SMAL_RS03635 PF03358 NADPH-dependent FMN reductase SMAL_RS03640 PF03631 Virulence factor BrkB SMAL_RS03645 PF00578 AhpC/TSA family SMAL_RS03650 PF03976 Polyphosphate kinase 2 (PPK2) SMAL_RS03655 PF00665 Integrase core domain SMAL_RS03665 PF03462 PCRF domain SMAL_RS03665 PF00472 RF-1 domain SMAL_RS03670 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SMAL_RS03670 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SMAL_RS03670 PF01488 Shikimate / quinate 5-dehydrogenase SMAL_RS03680 PF03550 Outer membrane lipoprotein LolB SMAL_RS03685 PF00288 GHMP kinases N terminal domain SMAL_RS03685 PF08544 GHMP kinases C terminal SMAL_RS03695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMAL_RS03695 PF14572 Phosphoribosyl synthetase-associated domain SMAL_RS03700 PF01386 Ribosomal L25p family SMAL_RS03700 PF14693 Ribosomal protein TL5, C-terminal domain SMAL_RS03705 PF01195 Peptidyl-tRNA hydrolase SMAL_RS03710 PF01926 50S ribosome-binding GTPase SMAL_RS03710 PF06071 Protein of unknown function (DUF933) SMAL_RS03730 PF03797 Autotransporter beta-domain SMAL_RS03730 PF12951 Passenger-associated-transport-repeat SMAL_RS03735 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS03735 PF00072 Response regulator receiver domain SMAL_RS03740 PF09456 RcsC Alpha-Beta-Loop (ABL) SMAL_RS03740 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS03740 PF00072 Response regulator receiver domain SMAL_RS03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS03745 PF00360 Phytochrome region SMAL_RS03745 PF00563 EAL domain SMAL_RS03745 PF01590 GAF domain SMAL_RS03745 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS03750 PF09456 RcsC Alpha-Beta-Loop (ABL) SMAL_RS03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS03750 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS03750 PF00072 Response regulator receiver domain SMAL_RS03755 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS03755 PF00593 TonB dependent receptor SMAL_RS03760 PF03575 Peptidase family S51 SMAL_RS03765 PF01112 Asparaginase SMAL_RS03785 PF03143 Elongation factor Tu C-terminal domain SMAL_RS03785 PF03144 Elongation factor Tu domain 2 SMAL_RS03785 PF00009 Elongation factor Tu GTP binding domain SMAL_RS03795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SMAL_RS03800 PF02357 Transcription termination factor nusG SMAL_RS03800 PF00467 KOW motif SMAL_RS03805 PF00298 Ribosomal protein L11, RNA binding domain SMAL_RS03805 PF03946 Ribosomal protein L11, N-terminal domain SMAL_RS03810 PF00687 Ribosomal protein L1p/L10e family SMAL_RS03815 PF00466 Ribosomal protein L10 SMAL_RS03820 PF00542 Ribosomal protein L7/L12 C-terminal domain SMAL_RS03820 PF16320 Ribosomal protein L7/L12 dimerisation domain SMAL_RS03825 PF10385 RNA polymerase beta subunit external 1 domain SMAL_RS03825 PF04565 RNA polymerase Rpb2, domain 3 SMAL_RS03825 PF04561 RNA polymerase Rpb2, domain 2 SMAL_RS03825 PF00562 RNA polymerase Rpb2, domain 6 SMAL_RS03825 PF04560 RNA polymerase Rpb2, domain 7 SMAL_RS03825 PF04563 RNA polymerase beta subunit SMAL_RS03830 PF04998 RNA polymerase Rpb1, domain 5 SMAL_RS03830 PF05000 RNA polymerase Rpb1, domain 4 SMAL_RS03830 PF04983 RNA polymerase Rpb1, domain 3 SMAL_RS03830 PF00623 RNA polymerase Rpb1, domain 2 SMAL_RS03830 PF04997 RNA polymerase Rpb1, domain 1 SMAL_RS03835 PF00164 Ribosomal protein S12/S23 SMAL_RS03840 PF00177 Ribosomal protein S7p/S5e SMAL_RS03845 PF03144 Elongation factor Tu domain 2 SMAL_RS03845 PF03764 Elongation factor G, domain IV SMAL_RS03845 PF14492 Elongation Factor G, domain II SMAL_RS03845 PF00009 Elongation factor Tu GTP binding domain SMAL_RS03845 PF00679 Elongation factor G C-terminus SMAL_RS03850 PF00009 Elongation factor Tu GTP binding domain SMAL_RS03850 PF03144 Elongation factor Tu domain 2 SMAL_RS03850 PF03143 Elongation factor Tu C-terminal domain SMAL_RS03855 PF00338 Ribosomal protein S10p/S20e SMAL_RS03860 PF00297 Ribosomal protein L3 SMAL_RS03865 PF00573 Ribosomal protein L4/L1 family SMAL_RS03870 PF00276 Ribosomal protein L23 SMAL_RS03875 PF03947 Ribosomal Proteins L2, C-terminal domain SMAL_RS03875 PF00181 Ribosomal Proteins L2, RNA binding domain SMAL_RS03880 PF00203 Ribosomal protein S19 SMAL_RS03885 PF00237 Ribosomal protein L22p/L17e SMAL_RS03890 PF00189 Ribosomal protein S3, C-terminal domain SMAL_RS03890 PF07650 KH domain SMAL_RS03895 PF00252 Ribosomal protein L16p/L10e SMAL_RS03900 PF00831 Ribosomal L29 protein SMAL_RS03905 PF00366 Ribosomal protein S17 SMAL_RS03910 PF00238 Ribosomal protein L14p/L23e SMAL_RS03915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SMAL_RS03915 PF00467 KOW motif SMAL_RS03920 PF00673 ribosomal L5P family C-terminus SMAL_RS03920 PF00281 Ribosomal protein L5 SMAL_RS03925 PF00253 Ribosomal protein S14p/S29e SMAL_RS03930 PF00410 Ribosomal protein S8 SMAL_RS03935 PF00347 Ribosomal protein L6 SMAL_RS03940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SMAL_RS03945 PF03719 Ribosomal protein S5, C-terminal domain SMAL_RS03945 PF00333 Ribosomal protein S5, N-terminal domain SMAL_RS03950 PF00327 Ribosomal protein L30p/L7e SMAL_RS03955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SMAL_RS03960 PF00344 SecY translocase SMAL_RS03965 PF00416 Ribosomal protein S13/S18 SMAL_RS03970 PF00411 Ribosomal protein S11 SMAL_RS03975 PF00163 Ribosomal protein S4/S9 N-terminal domain SMAL_RS03975 PF01479 S4 domain SMAL_RS03980 PF01000 RNA polymerase Rpb3/RpoA insert domain SMAL_RS03980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SMAL_RS03980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SMAL_RS03985 PF01196 Ribosomal protein L17 SMAL_RS03990 PF02600 Disulfide bond formation protein DsbB SMAL_RS04000 PF01474 Class-II DAHP synthetase family SMAL_RS04010 PF01425 Amidase SMAL_RS04020 PF00679 Elongation factor G C-terminus SMAL_RS04020 PF00009 Elongation factor Tu GTP binding domain SMAL_RS04020 PF03144 Elongation factor Tu domain 2 SMAL_RS04025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMAL_RS04030 PF00056 lactate/malate dehydrogenase, NAD binding domain SMAL_RS04030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SMAL_RS04035 PF00849 RNA pseudouridylate synthase SMAL_RS04040 PF16177 Acetyl-coenzyme A synthetase N-terminus SMAL_RS04040 PF00501 AMP-binding enzyme SMAL_RS04040 PF13193 AMP-binding enzyme C-terminal domain SMAL_RS04055 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS04055 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS04065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMAL_RS04065 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS04075 PF00107 Zinc-binding dehydrogenase SMAL_RS04075 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS04080 PF05736 OprF membrane domain SMAL_RS04080 PF00691 OmpA family SMAL_RS04090 PF00849 RNA pseudouridylate synthase SMAL_RS04090 PF01479 S4 domain SMAL_RS04100 PF00155 Aminotransferase class I and II SMAL_RS04110 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS04110 PF00107 Zinc-binding dehydrogenase SMAL_RS04115 PF10459 Peptidase S46 SMAL_RS04120 PF00300 Histidine phosphatase superfamily (branch 1) SMAL_RS04125 PF02875 Mur ligase family, glutamate ligase domain SMAL_RS04125 PF08245 Mur ligase middle domain SMAL_RS04140 PF00156 Phosphoribosyl transferase domain SMAL_RS04145 PF04305 Protein of unknown function (DUF455) SMAL_RS04160 PF00149 Calcineurin-like phosphoesterase SMAL_RS04165 PF01569 PAP2 superfamily SMAL_RS04170 PF00534 Glycosyl transferases group 1 SMAL_RS04170 PF13439 Glycosyltransferase Family 4 SMAL_RS04175 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS04175 PF00593 TonB dependent receptor SMAL_RS04180 PF00593 TonB dependent receptor SMAL_RS04180 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS04185 PF02541 Ppx/GppA phosphatase family SMAL_RS04190 PF13090 Polyphosphate kinase C-terminal domain 2 SMAL_RS04190 PF02503 Polyphosphate kinase middle domain SMAL_RS04190 PF17941 Polyphosphate kinase C-terminal domain 1 SMAL_RS04190 PF13089 Polyphosphate kinase N-terminal domain SMAL_RS04195 PF00989 PAS fold SMAL_RS04195 PF11808 Phosphate regulon sensor protein PhoR SMAL_RS04195 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS04200 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS04200 PF00072 Response regulator receiver domain SMAL_RS04205 PF13181 Tetratricopeptide repeat SMAL_RS04205 PF01435 Peptidase family M48 SMAL_RS04210 PF00462 Glutaredoxin SMAL_RS04220 PF00180 Isocitrate/isopropylmalate dehydrogenase SMAL_RS04230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS04230 PF03466 LysR substrate binding domain SMAL_RS04285 PF05697 Bacterial trigger factor protein (TF) SMAL_RS04285 PF05698 Bacterial trigger factor protein (TF) C-terminus SMAL_RS04290 PF00574 Clp protease SMAL_RS04295 PF10431 C-terminal, D2-small domain, of ClpB protein SMAL_RS04295 PF07724 AAA domain (Cdc48 subfamily) SMAL_RS04295 PF06689 ClpX C4-type zinc finger SMAL_RS04300 PF02190 ATP-dependent protease La (LON) substrate-binding domain SMAL_RS04300 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS04300 PF05362 Lon protease (S16) C-terminal proteolytic domain SMAL_RS04305 PF00216 Bacterial DNA-binding protein SMAL_RS04335 PF05698 Bacterial trigger factor protein (TF) C-terminus SMAL_RS04340 PF05257 CHAP domain SMAL_RS04340 PF01476 LysM domain SMAL_RS04345 PF00753 Metallo-beta-lactamase superfamily SMAL_RS04345 PF16123 Hydroxyacylglutathione hydrolase C-terminus SMAL_RS04350 PF08241 Methyltransferase domain SMAL_RS04355 PF00075 RNase H SMAL_RS04360 PF00929 Exonuclease SMAL_RS04390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SMAL_RS04400 PF12706 Beta-lactamase superfamily domain SMAL_RS04410 PF00893 Small Multidrug Resistance protein SMAL_RS04435 PF12170 DNA polymerase III tau subunit V interacting with alpha SMAL_RS04435 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SMAL_RS04435 PF12169 DNA polymerase III subunits gamma and tau domain III SMAL_RS04440 PF02575 YbaB/EbfC DNA-binding family SMAL_RS04445 PF13662 Toprim domain SMAL_RS04445 PF02132 RecR protein SMAL_RS04450 PF01230 HIT domain SMAL_RS04460 PF11992 Domain of unknown function (DUF3488) SMAL_RS04460 PF01841 Transglutaminase-like superfamily SMAL_RS04460 PF13559 Domain of unknown function (DUF4129) SMAL_RS04470 PF17863 AAA lid domain SMAL_RS04470 PF07726 ATPase family associated with various cellular activities (AAA) SMAL_RS04480 PF02545 Maf-like protein SMAL_RS04485 PF02620 Large ribosomal RNA subunit accumulation protein YceD SMAL_RS04490 PF01783 Ribosomal L32p protein family SMAL_RS04495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMAL_RS04495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMAL_RS04505 PF00698 Acyl transferase domain SMAL_RS04515 PF00550 Phosphopantetheine attachment site SMAL_RS04520 PF00109 Beta-ketoacyl synthase, N-terminal domain SMAL_RS04520 PF02801 Beta-ketoacyl synthase, C-terminal domain SMAL_RS04525 PF04715 Anthranilate synthase component I, N terminal region SMAL_RS04525 PF00425 chorismate binding enzyme SMAL_RS04530 PF02618 YceG-like family SMAL_RS04535 PF02223 Thymidylate kinase SMAL_RS04540 PF09115 DNA polymerase III, delta subunit, C terminal SMAL_RS04555 PF14552 Tautomerase enzyme SMAL_RS04590 PF04984 Phage tail sheath protein subtilisin-like domain SMAL_RS04590 PF17482 Phage tail sheath C-terminal domain SMAL_RS04700 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS04700 PF00593 TonB dependent receptor SMAL_RS04710 PF07690 Major Facilitator Superfamily SMAL_RS04715 PF00455 DeoR C terminal sensor domain SMAL_RS04715 PF08220 DeoR-like helix-turn-helix domain SMAL_RS04720 PF13599 Pentapeptide repeats (9 copies) SMAL_RS04730 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS04730 PF00155 Aminotransferase class I and II SMAL_RS04735 PF00892 EamA-like transporter family SMAL_RS04740 PF03466 LysR substrate binding domain SMAL_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS04745 PF07690 Major Facilitator Superfamily SMAL_RS04750 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS04750 PF00593 TonB dependent receptor SMAL_RS04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS04755 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS04755 PF00672 HAMP domain SMAL_RS04760 PF00072 Response regulator receiver domain SMAL_RS04760 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS04765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS04765 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS04770 PF00873 AcrB/AcrD/AcrF family SMAL_RS04790 PF07690 Major Facilitator Superfamily SMAL_RS04795 PF00376 MerR family regulatory protein SMAL_RS04795 PF09278 MerR, DNA binding SMAL_RS04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS04805 PF03466 LysR substrate binding domain SMAL_RS04810 PF14748 Pyrroline-5-carboxylate reductase dimerisation SMAL_RS04810 PF03807 NADP oxidoreductase coenzyme F420-dependent SMAL_RS04815 PF01168 Alanine racemase, N-terminal domain SMAL_RS04820 PF00437 Type II/IV secretion system protein SMAL_RS04825 PF00437 Type II/IV secretion system protein SMAL_RS04830 PF00248 Aldo/keto reductase family SMAL_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS04835 PF03466 LysR substrate binding domain SMAL_RS04845 PF00583 Acetyltransferase (GNAT) family SMAL_RS04855 PF03352 Methyladenine glycosylase SMAL_RS04860 PF13687 Domain of unknown function (DUF4153) SMAL_RS04865 PF02622 Uncharacterized ACR, COG1678 SMAL_RS04870 PF03652 Holliday junction resolvase SMAL_RS04875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMAL_RS04875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMAL_RS04895 PF00571 CBS domain SMAL_RS04895 PF01769 Divalent cation transporter SMAL_RS04895 PF03448 MgtE intracellular N domain SMAL_RS04900 PF00391 PEP-utilising enzyme, mobile domain SMAL_RS04900 PF02896 PEP-utilising enzyme, TIM barrel domain SMAL_RS04900 PF05524 PEP-utilising enzyme, N-terminal SMAL_RS04905 PF00381 PTS HPr component phosphorylation site SMAL_RS04915 PF03668 P-loop ATPase protein family SMAL_RS04920 PF02603 HPr Serine kinase N terminus SMAL_RS04920 PF07475 HPr Serine kinase C-terminal domain SMAL_RS04925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMAL_RS04930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SMAL_RS04935 PF04963 Sigma-54 factor, core binding domain SMAL_RS04935 PF00309 Sigma-54 factor, Activator interacting domain (AID) SMAL_RS04935 PF04552 Sigma-54, DNA binding domain SMAL_RS04940 PF00005 ABC transporter SMAL_RS04940 PF12399 Branched-chain amino acid ATP-binding cassette transporter SMAL_RS04960 PF01380 SIS domain SMAL_RS04960 PF00571 CBS domain SMAL_RS04970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMAL_RS04990 PF00551 Formyl transferase SMAL_RS05010 PF00586 AIR synthase related protein, N-terminal domain SMAL_RS05010 PF02769 AIR synthase related protein, C-terminal domain SMAL_RS05020 PF01594 AI-2E family transporter SMAL_RS05025 PF00308 Bacterial dnaA protein SMAL_RS05035 PF13333 Integrase core domain SMAL_RS05035 PF00665 Integrase core domain SMAL_RS05035 PF13276 HTH-like domain SMAL_RS05040 PF00483 Nucleotidyl transferase SMAL_RS05045 PF01636 Phosphotransferase enzyme family SMAL_RS05050 PF04226 Transglycosylase associated protein SMAL_RS05080 PF00258 Flavodoxin SMAL_RS05080 PF00175 Oxidoreductase NAD-binding domain SMAL_RS05080 PF00667 FAD binding domain SMAL_RS05085 PF02424 ApbE family SMAL_RS05105 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS05105 PF00593 TonB dependent receptor SMAL_RS05115 PF18331 PKHD-type hydroxylase C-terminal domain SMAL_RS05115 PF13640 2OG-Fe(II) oxygenase superfamily SMAL_RS05125 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS05125 PF00593 TonB dependent receptor SMAL_RS05135 PF00355 Rieske [2Fe-2S] domain SMAL_RS05150 PF00266 Aminotransferase class-V SMAL_RS05155 PF01458 Uncharacterized protein family (UPF0051) SMAL_RS05160 PF00005 ABC transporter SMAL_RS05170 PF01458 Uncharacterized protein family (UPF0051) SMAL_RS05175 PF02082 Transcriptional regulator SMAL_RS05205 PF02566 OsmC-like protein SMAL_RS05210 PF02567 Phenazine biosynthesis-like protein SMAL_RS05215 PF02567 Phenazine biosynthesis-like protein SMAL_RS05220 PF00696 Amino acid kinase family SMAL_RS05220 PF01842 ACT domain SMAL_RS05230 PF08245 Mur ligase middle domain SMAL_RS05230 PF02875 Mur ligase family, glutamate ligase domain SMAL_RS05245 PF00348 Polyprenyl synthetase SMAL_RS05250 PF00128 Alpha amylase, catalytic domain SMAL_RS05260 PF10566 Glycoside hydrolase 97 SMAL_RS05260 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation SMAL_RS05260 PF14508 Glycosyl-hydrolase 97 N-terminal SMAL_RS05270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMAL_RS05275 PF00128 Alpha amylase, catalytic domain SMAL_RS05275 PF00686 Starch binding domain SMAL_RS05310 PF13732 Domain of unknown function (DUF4162) SMAL_RS05310 PF00005 ABC transporter SMAL_RS05315 PF06745 KaiC SMAL_RS05320 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS05320 PF00072 Response regulator receiver domain SMAL_RS05320 PF13188 PAS domain SMAL_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS05320 PF08448 PAS fold SMAL_RS05325 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS05330 PF00436 Single-strand binding protein family SMAL_RS05335 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SMAL_RS05335 PF04851 Type III restriction enzyme, res subunit SMAL_RS05335 PF00271 Helicase conserved C-terminal domain SMAL_RS05335 PF08463 EcoEI R protein C-terminal SMAL_RS05340 PF02646 RmuC family SMAL_RS05345 PF12161 HsdM N-terminal domain SMAL_RS05345 PF02384 N-6 DNA Methylase SMAL_RS05350 PF00106 short chain dehydrogenase SMAL_RS05365 PF05199 GMC oxidoreductase SMAL_RS05365 PF00732 GMC oxidoreductase SMAL_RS05390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMAL_RS05390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMAL_RS05395 PF03825 Nucleoside H+ symporter SMAL_RS05405 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS05410 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS05410 PF00072 Response regulator receiver domain SMAL_RS05420 PF03466 LysR substrate binding domain SMAL_RS05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS05435 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS05445 PF00117 Glutamine amidotransferase class-I SMAL_RS05445 PF00958 GMP synthase C terminal domain SMAL_RS05445 PF03352 Methyladenine glycosylase SMAL_RS05445 PF13673 Acetyltransferase (GNAT) domain SMAL_RS05445 PF13302 Acetyltransferase (GNAT) domain SMAL_RS05450 PF03466 LysR substrate binding domain SMAL_RS05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS05455 PF12146 Serine aminopeptidase, S33 SMAL_RS05465 PF01022 Bacterial regulatory protein, arsR family SMAL_RS05480 PF13443 Cro/C1-type HTH DNA-binding domain SMAL_RS05485 PF03741 Integral membrane protein TerC family SMAL_RS05485 PF03471 Transporter associated domain SMAL_RS05485 PF00571 CBS domain SMAL_RS05505 PF08946 Osmosensory transporter coiled coil SMAL_RS05505 PF00083 Sugar (and other) transporter SMAL_RS05510 PF01156 Inosine-uridine preferring nucleoside hydrolase SMAL_RS05520 PF07729 FCD domain SMAL_RS05520 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS05530 PF00698 Acyl transferase domain SMAL_RS05535 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SMAL_RS05540 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG SMAL_RS05550 PF01039 Carboxyl transferase domain SMAL_RS05555 PF06857 Malonate decarboxylase delta subunit (MdcD) SMAL_RS05560 PF16957 Malonate decarboxylase, alpha subunit, transporter SMAL_RS05565 PF00593 TonB dependent receptor SMAL_RS05565 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS05565 PF07660 Secretin and TonB N terminus short domain SMAL_RS05570 PF06039 Malate:quinone oxidoreductase (Mqo) SMAL_RS05575 PF13673 Acetyltransferase (GNAT) domain SMAL_RS05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS05580 PF03466 LysR substrate binding domain SMAL_RS05585 PF01810 LysE type translocator SMAL_RS05595 PF00854 POT family SMAL_RS05605 PF03169 OPT oligopeptide transporter protein SMAL_RS05610 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SMAL_RS05610 PF07676 WD40-like Beta Propeller Repeat SMAL_RS05610 PF00326 Prolyl oligopeptidase family SMAL_RS05625 PF03776 Septum formation topological specificity factor MinE SMAL_RS05630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SMAL_RS05635 PF03775 Septum formation inhibitor MinC, C-terminal domain SMAL_RS05635 PF05209 Septum formation inhibitor MinC, N-terminal domain SMAL_RS05645 PF07730 Histidine kinase SMAL_RS05650 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS05650 PF00072 Response regulator receiver domain SMAL_RS05690 PF02222 ATP-grasp domain SMAL_RS05690 PF01370 NAD dependent epimerase/dehydratase family SMAL_RS05700 PF04377 Arginine-tRNA-protein transferase, C terminus SMAL_RS05700 PF04376 Arginine-tRNA-protein transferase, N terminus SMAL_RS05710 PF08281 Sigma-70, region 4 SMAL_RS05710 PF04542 Sigma-70 region 2 SMAL_RS05725 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS05745 PF00005 ABC transporter SMAL_RS05745 PF17760 UvrA interaction domain SMAL_RS05745 PF17755 UvrA DNA-binding domain SMAL_RS05750 PF00829 Ribosomal prokaryotic L21 protein SMAL_RS05755 PF01016 Ribosomal L27 protein SMAL_RS05760 PF01018 GTP1/OBG SMAL_RS05760 PF01926 50S ribosome-binding GTPase SMAL_RS05765 PF01649 Ribosomal protein S20 SMAL_RS05770 PF03023 Lipid II flippase MurJ SMAL_RS05775 PF06574 FAD synthetase SMAL_RS05775 PF01687 Riboflavin kinase SMAL_RS05780 PF00133 tRNA synthetases class I (I, L, M and V) SMAL_RS05780 PF08264 Anticodon-binding domain of tRNA SMAL_RS05780 PF06827 Zinc finger found in FPG and IleRS SMAL_RS05785 PF01252 Signal peptidase (SPase) II SMAL_RS05790 PF02401 LytB protein SMAL_RS05800 PF07947 YhhN family SMAL_RS05815 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS05815 PF00593 TonB dependent receptor SMAL_RS05835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMAL_RS05835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMAL_RS05860 PF06481 COX Aromatic Rich Motif SMAL_RS05860 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SMAL_RS05865 PF00115 Cytochrome C and Quinol oxidase polypeptide I SMAL_RS05870 PF00510 Cytochrome c oxidase subunit III SMAL_RS05875 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SMAL_RS05880 PF03707 Bacterial signalling protein N terminal repeat SMAL_RS05880 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS05880 PF00563 EAL domain SMAL_RS05885 PF18073 Rubredoxin metal binding domain SMAL_RS05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS05890 PF00183 Hsp90 protein SMAL_RS05910 PF02881 SRP54-type protein, helical bundle domain SMAL_RS05910 PF00448 SRP54-type protein, GTPase domain SMAL_RS05910 PF02978 Signal peptide binding domain SMAL_RS05915 PF03060 Nitronate monooxygenase SMAL_RS05925 PF00886 Ribosomal protein S16 SMAL_RS05930 PF01782 RimM N-terminal domain SMAL_RS05930 PF05239 PRC-barrel domain SMAL_RS05935 PF01746 tRNA (Guanine-1)-methyltransferase SMAL_RS05940 PF01245 Ribosomal protein L19 SMAL_RS05960 PF01554 MatE SMAL_RS05970 PF01479 S4 domain SMAL_RS05985 PF00199 Catalase SMAL_RS05985 PF06628 Catalase-related immune-responsive SMAL_RS05990 PF00488 MutS domain V SMAL_RS05990 PF01624 MutS domain I SMAL_RS05990 PF05188 MutS domain II SMAL_RS05990 PF05192 MutS domain III SMAL_RS05990 PF05190 MutS family domain IV SMAL_RS06005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS06005 PF00672 HAMP domain SMAL_RS06025 PF13533 Biotin-lipoyl like SMAL_RS06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS06035 PF03466 LysR substrate binding domain SMAL_RS06040 PF01810 LysE type translocator SMAL_RS06050 PF00557 Metallopeptidase family M24 SMAL_RS06075 PF00202 Aminotransferase class-III SMAL_RS06085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SMAL_RS06090 PF00892 EamA-like transporter family SMAL_RS06095 PF00892 EamA-like transporter family SMAL_RS06100 PF12146 Serine aminopeptidase, S33 SMAL_RS06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS06105 PF08521 Two-component sensor kinase N-terminal SMAL_RS06105 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS06110 PF00072 Response regulator receiver domain SMAL_RS06110 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS06120 PF01638 HxlR-like helix-turn-helix SMAL_RS06125 PF07690 Major Facilitator Superfamily SMAL_RS06130 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06135 PF00593 TonB dependent receptor SMAL_RS06135 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS06140 PF01545 Cation efflux family SMAL_RS06145 PF04493 Endonuclease V SMAL_RS06150 PF00300 Histidine phosphatase superfamily (branch 1) SMAL_RS06155 PF05649 Peptidase family M13 SMAL_RS06155 PF01431 Peptidase family M13 SMAL_RS06160 PF01966 HD domain SMAL_RS06160 PF00072 Response regulator receiver domain SMAL_RS06165 PF02559 CarD-like/TRCF domain SMAL_RS06165 PF00270 DEAD/DEAH box helicase SMAL_RS06165 PF03461 TRCF domain SMAL_RS06165 PF17757 UvrB interaction domain SMAL_RS06165 PF00271 Helicase conserved C-terminal domain SMAL_RS06175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SMAL_RS06180 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS06180 PF00072 Response regulator receiver domain SMAL_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS06185 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS06185 PF00672 HAMP domain SMAL_RS06190 PF06123 Inner membrane protein CreD SMAL_RS06200 PF04389 Peptidase family M28 SMAL_RS06200 PF02225 PA domain SMAL_RS06205 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMAL_RS06210 PF01475 Ferric uptake regulator family SMAL_RS06215 PF13533 Biotin-lipoyl like SMAL_RS06230 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS06230 PF00593 TonB dependent receptor SMAL_RS06250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMAL_RS06250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMAL_RS06255 PF06029 AlkA N-terminal domain SMAL_RS06255 PF12833 Helix-turn-helix domain SMAL_RS06255 PF02805 Metal binding domain of Ada SMAL_RS06255 PF00730 HhH-GPD superfamily base excision DNA repair protein SMAL_RS06275 PF01494 FAD binding domain SMAL_RS06285 PF00270 DEAD/DEAH box helicase SMAL_RS06285 PF03880 DbpA RNA binding domain SMAL_RS06285 PF00271 Helicase conserved C-terminal domain SMAL_RS06290 PF08448 PAS fold SMAL_RS06290 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06290 PF00563 EAL domain SMAL_RS06295 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06295 PF08448 PAS fold SMAL_RS06300 PF00849 RNA pseudouridylate synthase SMAL_RS06300 PF01479 S4 domain SMAL_RS06305 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06310 PF02463 RecF/RecN/SMC N terminal domain SMAL_RS06330 PF00144 Beta-lactamase SMAL_RS06335 PF00664 ABC transporter transmembrane region SMAL_RS06335 PF00005 ABC transporter SMAL_RS06340 PF00328 Histidine phosphatase superfamily (branch 2) SMAL_RS06365 PF03466 LysR substrate binding domain SMAL_RS06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS06375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMAL_RS06380 PF03551 Transcriptional regulator PadR-like family SMAL_RS06400 PF03653 Uncharacterised protein family (UPF0093) SMAL_RS06405 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SMAL_RS06415 PF01336 OB-fold nucleic acid binding domain SMAL_RS06415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMAL_RS06415 PF02811 PHP domain SMAL_RS06415 PF14579 Helix-hairpin-helix motif SMAL_RS06415 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMAL_RS06420 PF01351 Ribonuclease HII SMAL_RS06425 PF02684 Lipid-A-disaccharide synthetase SMAL_RS06430 PF00132 Bacterial transferase hexapeptide (six repeats) SMAL_RS06430 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SMAL_RS06435 PF07977 FabA-like domain SMAL_RS06440 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SMAL_RS06440 PF00132 Bacterial transferase hexapeptide (six repeats) SMAL_RS06445 PF07244 Surface antigen variable number repeat SMAL_RS06445 PF01103 Surface antigen SMAL_RS06450 PF02163 Peptidase family M50 SMAL_RS06450 PF17820 PDZ domain SMAL_RS06455 PF13288 DXP reductoisomerase C-terminal domain SMAL_RS06455 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SMAL_RS06455 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SMAL_RS06465 PF01255 Putative undecaprenyl diphosphate synthase SMAL_RS06470 PF01765 Ribosome recycling factor SMAL_RS06475 PF00696 Amino acid kinase family SMAL_RS06480 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06485 PF00889 Elongation factor TS SMAL_RS06490 PF00318 Ribosomal protein S2 SMAL_RS06525 PF00557 Metallopeptidase family M24 SMAL_RS06530 PF08335 GlnD PII-uridylyltransferase SMAL_RS06530 PF01909 Nucleotidyltransferase domain SMAL_RS06530 PF01966 HD domain SMAL_RS06535 PF00132 Bacterial transferase hexapeptide (six repeats) SMAL_RS06535 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SMAL_RS06535 PF14602 Hexapeptide repeat of succinyl-transferase SMAL_RS06545 PF03960 ArsC family SMAL_RS06550 PF07687 Peptidase dimerisation domain SMAL_RS06550 PF01546 Peptidase family M20/M25/M40 SMAL_RS06560 PF00733 Asparagine synthase SMAL_RS06560 PF13537 Glutamine amidotransferase domain SMAL_RS06565 PF00999 Sodium/hydrogen exchanger family SMAL_RS06570 PF01804 Penicillin amidase SMAL_RS06575 PF00210 Ferritin-like domain SMAL_RS06580 PF03989 DNA gyrase C-terminal domain, beta-propeller SMAL_RS06580 PF00521 DNA gyrase/topoisomerase IV, subunit A SMAL_RS06585 PF12833 Helix-turn-helix domain SMAL_RS06595 PF02321 Outer membrane efflux protein SMAL_RS06600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS06600 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS06605 PF07690 Major Facilitator Superfamily SMAL_RS06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS06620 PF03466 LysR substrate binding domain SMAL_RS06640 PF08461 Ribonuclease R winged-helix domain SMAL_RS06640 PF17876 Cold shock domain SMAL_RS06640 PF00773 RNB domain SMAL_RS06640 PF00575 S1 RNA binding domain SMAL_RS06640 PF08206 Ribonuclease B OB domain SMAL_RS06650 PF00588 SpoU rRNA Methylase family SMAL_RS06650 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMAL_RS06655 PF02321 Outer membrane efflux protein SMAL_RS06660 PF12704 MacB-like periplasmic core domain SMAL_RS06660 PF02687 FtsX-like permease family SMAL_RS06660 PF00005 ABC transporter SMAL_RS06665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS06670 PF00072 Response regulator receiver domain SMAL_RS06670 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS06675 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS06675 PF00672 HAMP domain SMAL_RS06680 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06685 PF00929 Exonuclease SMAL_RS06690 PF07681 DoxX SMAL_RS06700 PF05114 Protein of unknown function (DUF692) SMAL_RS06710 PF01895 PhoU domain SMAL_RS06715 PF00005 ABC transporter SMAL_RS06720 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS06725 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS06730 PF12849 PBP superfamily domain SMAL_RS06740 PF12849 PBP superfamily domain SMAL_RS06750 PF10576 Iron-sulfur binding domain of endonuclease III SMAL_RS06750 PF00633 Helix-hairpin-helix motif SMAL_RS06750 PF00730 HhH-GPD superfamily base excision DNA repair protein SMAL_RS06760 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS06765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SMAL_RS06765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMAL_RS06770 PF00293 NUDIX domain SMAL_RS06775 PF00581 Rhodanese-like domain SMAL_RS06790 PF10672 S-adenosylmethionine-dependent methyltransferase SMAL_RS06790 PF02926 THUMP domain SMAL_RS06790 PF01170 Putative RNA methylase family UPF0020 SMAL_RS06810 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS06810 PF07660 Secretin and TonB N terminus short domain SMAL_RS06810 PF00593 TonB dependent receptor SMAL_RS06815 PF04286 Protein of unknown function (DUF445) SMAL_RS06825 PF00202 Aminotransferase class-III SMAL_RS06830 PF00171 Aldehyde dehydrogenase family SMAL_RS06840 PF00083 Sugar (and other) transporter SMAL_RS06840 PF07690 Major Facilitator Superfamily SMAL_RS06845 PF01814 Hemerythrin HHE cation binding domain SMAL_RS06850 PF00072 Response regulator receiver domain SMAL_RS06850 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS06870 PF01266 FAD dependent oxidoreductase SMAL_RS06875 PF07722 Peptidase C26 SMAL_RS06880 PF00120 Glutamine synthetase, catalytic domain SMAL_RS06885 PF13416 Bacterial extracellular solute-binding protein SMAL_RS06895 PF00005 ABC transporter SMAL_RS06895 PF08402 TOBE domain SMAL_RS06900 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS06905 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS06910 PF00171 Aldehyde dehydrogenase family SMAL_RS06925 PF03471 Transporter associated domain SMAL_RS06925 PF00571 CBS domain SMAL_RS06940 PF02130 Uncharacterized protein family UPF0054 SMAL_RS06945 PF02562 PhoH-like protein SMAL_RS06955 PF00005 ABC transporter SMAL_RS06965 PF00919 Uncharacterized protein family UPF0004 SMAL_RS06965 PF01938 TRAM domain SMAL_RS06965 PF04055 Radical SAM superfamily SMAL_RS06970 PF13417 Glutathione S-transferase, N-terminal domain SMAL_RS06980 PF01464 Transglycosylase SLT domain SMAL_RS06985 PF00355 Rieske [2Fe-2S] domain SMAL_RS06985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SMAL_RS06990 PF00032 Cytochrome b(C-terminal)/b6/petD SMAL_RS06990 PF00033 Cytochrome b/b6/petB SMAL_RS06995 PF02167 Cytochrome C1 family SMAL_RS07000 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS07000 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS07005 PF04386 Stringent starvation protein B SMAL_RS07020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SMAL_RS07020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SMAL_RS07030 PF00731 AIR carboxylase SMAL_RS07035 PF02222 ATP-grasp domain SMAL_RS07035 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SMAL_RS07040 PF02627 Carboxymuconolactone decarboxylase family SMAL_RS07045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMAL_RS07045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMAL_RS07050 PF00462 Glutaredoxin SMAL_RS07060 PF00593 TonB dependent receptor SMAL_RS07065 PF03641 Possible lysine decarboxylase SMAL_RS07065 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SMAL_RS07065 PF11892 Domain of unknown function (DUF3412) SMAL_RS07090 PF05567 Neisseria PilC beta-propeller domain SMAL_RS07095 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS07095 PF00114 Pilin (bacterial filament) SMAL_RS07110 PF00271 Helicase conserved C-terminal domain SMAL_RS07110 PF02151 UvrB/uvrC motif SMAL_RS07110 PF04851 Type III restriction enzyme, res subunit SMAL_RS07110 PF12344 Ultra-violet resistance protein B SMAL_RS07110 PF17757 UvrB interaction domain SMAL_RS07150 PF06629 MltA-interacting protein MipA SMAL_RS07155 PF00072 Response regulator receiver domain SMAL_RS07155 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS07160 PF00672 HAMP domain SMAL_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS07160 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS07170 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS07180 PF00005 ABC transporter SMAL_RS07180 PF00664 ABC transporter transmembrane region SMAL_RS07185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SMAL_RS07190 PF02348 Cytidylyltransferase SMAL_RS07195 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMAL_RS07205 PF02151 UvrB/uvrC motif SMAL_RS07205 PF08459 UvrC Helix-hairpin-helix N-terminal SMAL_RS07205 PF01541 GIY-YIG catalytic domain SMAL_RS07210 PF01066 CDP-alcohol phosphatidyltransferase SMAL_RS07235 PF02321 Outer membrane efflux protein SMAL_RS07245 PF12704 MacB-like periplasmic core domain SMAL_RS07245 PF02687 FtsX-like permease family SMAL_RS07245 PF00005 ABC transporter SMAL_RS07285 PF01613 Flavin reductase like domain SMAL_RS07320 PF02311 AraC-like ligand binding domain SMAL_RS07320 PF12833 Helix-turn-helix domain SMAL_RS07325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SMAL_RS07345 PF12801 4Fe-4S binding domain SMAL_RS07345 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SMAL_RS07345 PF13746 4Fe-4S dicluster domain SMAL_RS07360 PF06969 HemN C-terminal domain SMAL_RS07360 PF04055 Radical SAM superfamily SMAL_RS07375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SMAL_RS07375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SMAL_RS07375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SMAL_RS07380 PF01645 Conserved region in glutamate synthase SMAL_RS07385 PF13673 Acetyltransferase (GNAT) domain SMAL_RS07390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMAL_RS07390 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS07395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMAL_RS07405 PF00581 Rhodanese-like domain SMAL_RS07405 PF17773 UPF0176 acylphosphatase like domain SMAL_RS07410 PF00296 Luciferase-like monooxygenase SMAL_RS07425 PF01595 Cyclin M transmembrane N-terminal domain SMAL_RS07425 PF03471 Transporter associated domain SMAL_RS07425 PF00571 CBS domain SMAL_RS07435 PF01384 Phosphate transporter family SMAL_RS07445 PF13302 Acetyltransferase (GNAT) domain SMAL_RS07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS07450 PF00204 DNA gyrase B SMAL_RS07450 PF01751 Toprim domain SMAL_RS07450 PF00986 DNA gyrase B subunit, carboxyl terminus SMAL_RS07460 PF00117 Glutamine amidotransferase class-I SMAL_RS07460 PF06418 CTP synthase N-terminus SMAL_RS07465 PF00793 DAHP synthetase I family SMAL_RS07480 PF00113 Enolase, C-terminal TIM barrel domain SMAL_RS07480 PF03952 Enolase, N-terminal domain SMAL_RS07485 PF04977 Septum formation initiator SMAL_RS07490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SMAL_RS07495 PF02542 YgbB family SMAL_RS07500 PF01142 tRNA pseudouridine synthase D (TruD) SMAL_RS07505 PF01713 Smr domain SMAL_RS07510 PF01975 Survival protein SurE SMAL_RS07525 PF01476 LysM domain SMAL_RS07525 PF01551 Peptidase family M23 SMAL_RS07530 PF01548 Transposase SMAL_RS07530 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS07540 PF04430 Protein of unknown function (DUF498/DUF598) SMAL_RS07545 PF01985 CRS1 / YhbY (CRM) domain SMAL_RS07550 PF01728 FtsJ-like methyltransferase SMAL_RS07555 PF17862 AAA+ lid domain SMAL_RS07555 PF06480 FtsH Extracellular SMAL_RS07555 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS07555 PF01434 Peptidase family M41 SMAL_RS07565 PF00809 Pterin binding enzyme SMAL_RS07575 PF17209 Hfq protein SMAL_RS07580 PF13167 GTP-binding GTPase N-terminal SMAL_RS07580 PF16360 GTP-binding GTPase Middle Region SMAL_RS07580 PF01926 50S ribosome-binding GTPase SMAL_RS07585 PF02464 Competence-damaged protein SMAL_RS07590 PF03109 ABC1 family SMAL_RS07595 PF00717 Peptidase S24-like SMAL_RS07595 PF01726 LexA DNA binding domain SMAL_RS07600 PF00154 recA bacterial DNA recombination protein SMAL_RS07605 PF02631 RecX family SMAL_RS07610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMAL_RS07610 PF01411 tRNA synthetases class II (A) SMAL_RS07610 PF02272 DHHA1 domain SMAL_RS07615 PF02599 Global regulator protein family SMAL_RS07635 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS07635 PF00593 TonB dependent receptor SMAL_RS07650 PF00480 ROK family SMAL_RS07665 PF00456 Transketolase, thiamine diphosphate binding domain SMAL_RS07665 PF17831 Pyruvate dehydrogenase E1 component middle domain SMAL_RS07690 PF09423 PhoD-like phosphatase SMAL_RS07690 PF16655 PhoD-like phosphatase, N-terminal domain SMAL_RS07695 PF05506 Domain of unknown function (DUF756) SMAL_RS07695 PF04185 Phosphoesterase family SMAL_RS07700 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS07700 PF00593 TonB dependent receptor SMAL_RS07705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SMAL_RS07710 PF00034 Cytochrome c SMAL_RS07710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SMAL_RS07720 PF07690 Major Facilitator Superfamily SMAL_RS07730 PF00593 TonB dependent receptor SMAL_RS07730 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS07730 PF07660 Secretin and TonB N terminus short domain SMAL_RS07735 PF02678 Pirin SMAL_RS07735 PF17954 Quercetinase C-terminal cupin domain SMAL_RS07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS07740 PF03466 LysR substrate binding domain SMAL_RS07765 PF08543 Phosphomethylpyrimidine kinase SMAL_RS07765 PF02581 Thiamine monophosphate synthase SMAL_RS07780 PF13638 PIN domain SMAL_RS07780 PF02562 PhoH-like protein SMAL_RS07785 PF00578 AhpC/TSA family SMAL_RS07795 PF00701 Dihydrodipicolinate synthetase family SMAL_RS07805 PF11953 Domain of unknown function (DUF3470) SMAL_RS07805 PF00037 4Fe-4S binding domain SMAL_RS07810 PF00083 Sugar (and other) transporter SMAL_RS07820 PF12627 Probable RNA and SrmB- binding site of polymerase A SMAL_RS07820 PF12626 Polymerase A arginine-rich C-terminus SMAL_RS07820 PF01743 Poly A polymerase head domain SMAL_RS07825 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SMAL_RS07830 PF02548 Ketopantoate hydroxymethyltransferase SMAL_RS07835 PF02569 Pantoate-beta-alanine ligase SMAL_RS07845 PF02261 Aspartate decarboxylase SMAL_RS07850 PF00342 Phosphoglucose isomerase SMAL_RS07855 PF00072 Response regulator receiver domain SMAL_RS07855 PF02954 Bacterial regulatory protein, Fis family SMAL_RS07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS07860 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS07865 PF04551 GcpE protein SMAL_RS07870 PF01569 PAP2 superfamily SMAL_RS07875 PF00072 Response regulator receiver domain SMAL_RS07875 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS07880 PF01081 KDPG and KHG aldolase SMAL_RS07885 PF00920 Dehydratase family SMAL_RS07890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SMAL_RS07895 PF02685 Glucokinase SMAL_RS07900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SMAL_RS07900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SMAL_RS07905 PF17912 MalK OB fold domain SMAL_RS07905 PF03459 TOBE domain SMAL_RS07905 PF00005 ABC transporter SMAL_RS07915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SMAL_RS07920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SMAL_RS07925 PF00890 FAD binding domain SMAL_RS07925 PF02910 Fumarate reductase flavoprotein C-term SMAL_RS07930 PF13237 4Fe-4S dicluster domain SMAL_RS07930 PF13085 2Fe-2S iron-sulfur cluster binding domain SMAL_RS07935 PF03937 Flavinator of succinate dehydrogenase SMAL_RS07945 PF12704 MacB-like periplasmic core domain SMAL_RS07945 PF02687 FtsX-like permease family SMAL_RS07950 PF00005 ABC transporter SMAL_RS07960 PF04362 Bacterial Fe(2+) trafficking SMAL_RS07965 PF14815 NUDIX domain SMAL_RS07965 PF00633 Helix-hairpin-helix motif SMAL_RS07965 PF00730 HhH-GPD superfamily base excision DNA repair protein SMAL_RS07970 PF02881 SRP54-type protein, helical bundle domain SMAL_RS07970 PF00448 SRP54-type protein, GTPase domain SMAL_RS07980 PF00183 Hsp90 protein SMAL_RS07980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS07990 PF01467 Cytidylyltransferase-like SMAL_RS08000 PF00037 4Fe-4S binding domain SMAL_RS08010 PF00753 Metallo-beta-lactamase superfamily SMAL_RS08040 PF00719 Inorganic pyrophosphatase SMAL_RS08050 PF00875 DNA photolyase SMAL_RS08050 PF03441 FAD binding domain of DNA photolyase SMAL_RS08055 PF13488 Glycine zipper SMAL_RS08055 PF00691 OmpA family SMAL_RS08060 PF03466 LysR substrate binding domain SMAL_RS08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS08075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS08080 PF00873 AcrB/AcrD/AcrF family SMAL_RS08085 PF00106 short chain dehydrogenase SMAL_RS08090 PF02321 Outer membrane efflux protein SMAL_RS08150 PF04151 Bacterial pre-peptidase C-terminal domain SMAL_RS08150 PF00082 Subtilase family SMAL_RS08155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS08155 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS08160 PF00005 ABC transporter SMAL_RS08160 PF03412 Peptidase C39 family SMAL_RS08160 PF00664 ABC transporter transmembrane region SMAL_RS08185 PF01668 SmpB protein SMAL_RS08190 PF03364 Polyketide cyclase / dehydrase and lipid transport SMAL_RS08195 PF03658 RnfH family Ubiquitin SMAL_RS08200 PF04355 SmpA / OmlA family SMAL_RS08205 PF01475 Ferric uptake regulator family SMAL_RS08215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS08215 PF03466 LysR substrate binding domain SMAL_RS08220 PF02463 RecF/RecN/SMC N terminal domain SMAL_RS08225 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SMAL_RS08225 PF01628 HrcA protein C terminal domain SMAL_RS08230 PF01025 GrpE SMAL_RS08235 PF00012 Hsp70 protein SMAL_RS08240 PF01556 DnaJ C terminal domain SMAL_RS08240 PF00684 DnaJ central domain SMAL_RS08240 PF00226 DnaJ domain SMAL_RS08245 PF12833 Helix-turn-helix domain SMAL_RS08245 PF02311 AraC-like ligand binding domain SMAL_RS08250 PF07690 Major Facilitator Superfamily SMAL_RS08255 PF08543 Phosphomethylpyrimidine kinase SMAL_RS08260 PF01817 Chorismate mutase type II SMAL_RS08260 PF02153 Prephenate dehydrogenase SMAL_RS08270 PF00005 ABC transporter SMAL_RS08270 PF00664 ABC transporter transmembrane region SMAL_RS08275 PF01205 Uncharacterized protein family UPF0029 SMAL_RS08285 PF04542 Sigma-70 region 2 SMAL_RS08285 PF04545 Sigma-70, region 4 SMAL_RS08290 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS08290 PF01590 GAF domain SMAL_RS08290 PF00563 EAL domain SMAL_RS08290 PF00360 Phytochrome region SMAL_RS08295 PF03641 Possible lysine decarboxylase SMAL_RS08300 PF00202 Aminotransferase class-III SMAL_RS08305 PF02547 Queuosine biosynthesis protein SMAL_RS08310 PF01702 Queuine tRNA-ribosyltransferase SMAL_RS08315 PF02699 Preprotein translocase subunit SMAL_RS08320 PF02355 Protein export membrane protein SMAL_RS08320 PF07549 SecD/SecF GG Motif SMAL_RS08320 PF13721 SecD export protein N-terminal TM region SMAL_RS08325 PF07549 SecD/SecF GG Motif SMAL_RS08325 PF02355 Protein export membrane protein SMAL_RS08330 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase SMAL_RS08330 PF07055 Enoyl reductase FAD binding domain SMAL_RS08330 PF12241 Trans-2-enoyl-CoA reductase catalytic region SMAL_RS08335 PF00072 Response regulator receiver domain SMAL_RS08335 PF00563 EAL domain SMAL_RS08335 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS08345 PF07152 YaeQ protein SMAL_RS08350 PF01479 S4 domain SMAL_RS08350 PF00849 RNA pseudouridylate synthase SMAL_RS08355 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SMAL_RS08360 PF00313 'Cold-shock' DNA-binding domain SMAL_RS08365 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS08370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SMAL_RS08375 PF00156 Phosphoribosyl transferase domain SMAL_RS08380 PF00271 Helicase conserved C-terminal domain SMAL_RS08380 PF03880 DbpA RNA binding domain SMAL_RS08380 PF00270 DEAD/DEAH box helicase SMAL_RS08385 PF03601 Conserved hypothetical protein 698 SMAL_RS08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS08390 PF03466 LysR substrate binding domain SMAL_RS08395 PF12848 ABC transporter SMAL_RS08395 PF16326 ABC transporter C-terminal domain SMAL_RS08395 PF00005 ABC transporter SMAL_RS08400 PF01548 Transposase SMAL_RS08400 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS08405 PF00034 Cytochrome c SMAL_RS08415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS08420 PF00873 AcrB/AcrD/AcrF family SMAL_RS08425 PF00873 AcrB/AcrD/AcrF family SMAL_RS08440 PF00795 Carbon-nitrogen hydrolase SMAL_RS08445 PF04371 Porphyromonas-type peptidyl-arginine deiminase SMAL_RS08455 PF00444 Ribosomal protein L36 SMAL_RS08460 PF02224 Cytidylate kinase SMAL_RS08465 PF00575 S1 RNA binding domain SMAL_RS08470 PF00216 Bacterial DNA-binding protein SMAL_RS08480 PF18073 Rubredoxin metal binding domain SMAL_RS08485 PF00953 Glycosyl transferase family 4 SMAL_RS08490 PF02719 Polysaccharide biosynthesis protein SMAL_RS08495 PF00483 Nucleotidyl transferase SMAL_RS08500 PF02803 Thiolase, C-terminal domain SMAL_RS08500 PF00108 Thiolase, N-terminal domain SMAL_RS08505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMAL_RS08505 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS08505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMAL_RS08515 PF00334 Nucleoside diphosphate kinase SMAL_RS08520 PF04055 Radical SAM superfamily SMAL_RS08530 PF13464 Domain of unknown function (DUF4115) SMAL_RS08530 PF13464 Domain of unknown function (DUF4115) SMAL_RS08535 PF09976 Tetratricopeptide repeat-like domain SMAL_RS08540 PF01011 PQQ enzyme repeat SMAL_RS08540 PF13360 PQQ-like domain SMAL_RS08545 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SMAL_RS08545 PF01926 50S ribosome-binding GTPase SMAL_RS08565 PF00899 ThiF family SMAL_RS08570 PF00999 Sodium/hydrogen exchanger family SMAL_RS08570 PF02254 TrkA-N domain SMAL_RS08575 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SMAL_RS08575 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SMAL_RS08580 PF00478 IMP dehydrogenase / GMP reductase domain SMAL_RS08580 PF00571 CBS domain SMAL_RS08590 PF00958 GMP synthase C terminal domain SMAL_RS08590 PF00117 Glutamine amidotransferase class-I SMAL_RS08590 PF02540 NAD synthase SMAL_RS08605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS08605 PF03466 LysR substrate binding domain SMAL_RS08625 PF00106 short chain dehydrogenase SMAL_RS08635 PF01022 Bacterial regulatory protein, arsR family SMAL_RS08650 PF00106 short chain dehydrogenase SMAL_RS08655 PF12833 Helix-turn-helix domain SMAL_RS08655 PF06719 AraC-type transcriptional regulator N-terminus SMAL_RS08675 PF01965 DJ-1/PfpI family SMAL_RS08680 PF00593 TonB dependent receptor SMAL_RS08680 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS08685 PF03358 NADPH-dependent FMN reductase SMAL_RS08695 PF00296 Luciferase-like monooxygenase SMAL_RS08700 PF00296 Luciferase-like monooxygenase SMAL_RS08705 PF01546 Peptidase family M20/M25/M40 SMAL_RS08705 PF07687 Peptidase dimerisation domain SMAL_RS08710 PF00583 Acetyltransferase (GNAT) family SMAL_RS08715 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS08720 PF00005 ABC transporter SMAL_RS08725 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMAL_RS08740 PF00106 short chain dehydrogenase SMAL_RS08755 PF12706 Beta-lactamase superfamily domain SMAL_RS08760 PF08361 MAATS-type transcriptional repressor, C-terminal region SMAL_RS08760 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS08765 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS08765 PF00563 EAL domain SMAL_RS08765 PF03707 Bacterial signalling protein N terminal repeat SMAL_RS08770 PF03466 LysR substrate binding domain SMAL_RS08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS08775 PF07690 Major Facilitator Superfamily SMAL_RS08780 PF00106 short chain dehydrogenase SMAL_RS08790 PF00581 Rhodanese-like domain SMAL_RS08800 PF01636 Phosphotransferase enzyme family SMAL_RS08810 PF17932 Tetracyclin repressor-like, C-terminal domain SMAL_RS08810 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS08825 PF00892 EamA-like transporter family SMAL_RS08830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SMAL_RS08830 PF01565 FAD binding domain SMAL_RS08835 PF01180 Dihydroorotate dehydrogenase SMAL_RS08855 PF00171 Aldehyde dehydrogenase family SMAL_RS08865 PF00701 Dihydrodipicolinate synthetase family SMAL_RS08870 PF00583 Acetyltransferase (GNAT) family SMAL_RS08890 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS08895 PF00072 Response regulator receiver domain SMAL_RS08895 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS08900 PF13426 PAS domain SMAL_RS08900 PF00072 Response regulator receiver domain SMAL_RS08905 PF00072 Response regulator receiver domain SMAL_RS08905 PF01627 Hpt domain SMAL_RS08905 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS08905 PF00672 HAMP domain SMAL_RS08905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SMAL_RS08910 PF03705 CheR methyltransferase, all-alpha domain SMAL_RS08910 PF01739 CheR methyltransferase, SAM binding domain SMAL_RS08915 PF01339 CheB methylesterase SMAL_RS08920 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS08920 PF00989 PAS fold SMAL_RS08920 PF00672 HAMP domain SMAL_RS08920 PF18698 Histidine kinase sensor domain SMAL_RS08930 PF01022 Bacterial regulatory protein, arsR family SMAL_RS08935 PF04143 Sulphur transport SMAL_RS08965 PF03447 Homoserine dehydrogenase, NAD binding domain SMAL_RS08965 PF00742 Homoserine dehydrogenase SMAL_RS08965 PF13840 ACT domain SMAL_RS08965 PF01842 ACT domain SMAL_RS08965 PF00696 Amino acid kinase family SMAL_RS08970 PF00288 GHMP kinases N terminal domain SMAL_RS08970 PF08544 GHMP kinases C terminal SMAL_RS08975 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS08975 PF14821 Threonine synthase N terminus SMAL_RS08980 PF13545 Crp-like helix-turn-helix domain SMAL_RS08980 PF00027 Cyclic nucleotide-binding domain SMAL_RS08985 PF13393 Histidyl-tRNA synthetase SMAL_RS08985 PF03129 Anticodon binding domain SMAL_RS09000 PF01634 ATP phosphoribosyltransferase SMAL_RS09000 PF08029 HisG, C-terminal domain SMAL_RS09005 PF00815 Histidinol dehydrogenase SMAL_RS09010 PF00155 Aminotransferase class I and II SMAL_RS09015 PF08645 Polynucleotide kinase 3 phosphatase SMAL_RS09015 PF00475 Imidazoleglycerol-phosphate dehydratase SMAL_RS09020 PF00117 Glutamine amidotransferase class-I SMAL_RS09025 PF00977 Histidine biosynthesis protein SMAL_RS09030 PF00977 Histidine biosynthesis protein SMAL_RS09035 PF01502 Phosphoribosyl-AMP cyclohydrolase SMAL_RS09035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SMAL_RS09050 PF02685 Glucokinase SMAL_RS09055 PF01112 Asparaginase SMAL_RS09060 PF03932 CutC family SMAL_RS09065 PF00593 TonB dependent receptor SMAL_RS09065 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS09070 PF00403 Heavy-metal-associated domain SMAL_RS09075 PF09278 MerR, DNA binding SMAL_RS09075 PF00376 MerR family regulatory protein SMAL_RS09090 PF07971 Glycosyl hydrolase family 92 SMAL_RS09090 PF17678 Glycosyl hydrolase family 92 N-terminal domain SMAL_RS09095 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS09100 PF07690 Major Facilitator Superfamily SMAL_RS09105 PF00294 pfkB family carbohydrate kinase SMAL_RS09125 PF03079 ARD/ARD' family SMAL_RS09130 PF00596 Class II Aldolase and Adducin N-terminal domain SMAL_RS09140 PF13520 Amino acid permease SMAL_RS09145 PF13520 Amino acid permease SMAL_RS09155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMAL_RS09155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMAL_RS09160 PF01565 FAD binding domain SMAL_RS09160 PF02913 FAD linked oxidases, C-terminal domain SMAL_RS09175 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09175 PF00672 HAMP domain SMAL_RS09180 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS09180 PF00072 Response regulator receiver domain SMAL_RS09185 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS09185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS09190 PF00873 AcrB/AcrD/AcrF family SMAL_RS09210 PF09285 Elongation factor P, C-terminal SMAL_RS09210 PF08207 Elongation factor P (EF-P) KOW-like domain SMAL_RS09210 PF01132 Elongation factor P (EF-P) OB domain SMAL_RS09215 PF00106 short chain dehydrogenase SMAL_RS09220 PF00682 HMGL-like SMAL_RS09230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMAL_RS09230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMAL_RS09230 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS09240 PF07670 Nucleoside recognition SMAL_RS09240 PF02421 Ferrous iron transport protein B SMAL_RS09240 PF07664 Ferrous iron transport protein B C terminus SMAL_RS09255 PF02525 Flavodoxin-like fold SMAL_RS09265 PF00106 short chain dehydrogenase SMAL_RS09270 PF05173 Dihydrodipicolinate reductase, C-terminus SMAL_RS09270 PF01113 Dihydrodipicolinate reductase, N-terminus SMAL_RS09275 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SMAL_RS09275 PF00117 Glutamine amidotransferase class-I SMAL_RS09280 PF02142 MGS-like domain SMAL_RS09280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SMAL_RS09280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMAL_RS09285 PF01272 Transcription elongation factor, GreA/GreB, C-term SMAL_RS09285 PF03449 Transcription elongation factor, N-terminal SMAL_RS09305 PF02272 DHHA1 domain SMAL_RS09305 PF17768 RecJ OB domain SMAL_RS09305 PF01368 DHH family SMAL_RS09315 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) SMAL_RS09320 PF01548 Transposase SMAL_RS09320 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS09330 PF04397 LytTr DNA-binding domain SMAL_RS09335 PF00472 RF-1 domain SMAL_RS09335 PF03462 PCRF domain SMAL_RS09345 PF00171 Aldehyde dehydrogenase family SMAL_RS09350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMAL_RS09350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMAL_RS09350 PF00205 Thiamine pyrophosphate enzyme, central domain SMAL_RS09355 PF00152 tRNA synthetases class II (D, K and N) SMAL_RS09355 PF01336 OB-fold nucleic acid binding domain SMAL_RS09360 PF00072 Response regulator receiver domain SMAL_RS09365 PF00072 Response regulator receiver domain SMAL_RS09365 PF01627 Hpt domain SMAL_RS09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09365 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS09370 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS09375 PF00501 AMP-binding enzyme SMAL_RS09375 PF13193 AMP-binding enzyme C-terminal domain SMAL_RS09380 PF00732 GMC oxidoreductase SMAL_RS09380 PF05199 GMC oxidoreductase SMAL_RS09385 PF00171 Aldehyde dehydrogenase family SMAL_RS09390 PF13977 BetI-type transcriptional repressor, C-terminal SMAL_RS09390 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS09395 PF02028 BCCT, betaine/carnitine/choline family transporter SMAL_RS09400 PF00330 Aconitase family (aconitate hydratase) SMAL_RS09400 PF00694 Aconitase C-terminal domain SMAL_RS09415 PF00330 Aconitase family (aconitate hydratase) SMAL_RS09415 PF06434 Aconitate hydratase 2 N-terminus SMAL_RS09415 PF11791 Aconitate B N-terminal domain SMAL_RS09430 PF00561 alpha/beta hydrolase fold SMAL_RS09430 PF08386 TAP-like protein SMAL_RS09435 PF00072 Response regulator receiver domain SMAL_RS09435 PF01339 CheB methylesterase SMAL_RS09440 PF03975 CheD chemotactic sensory transduction SMAL_RS09445 PF03705 CheR methyltransferase, all-alpha domain SMAL_RS09445 PF01739 CheR methyltransferase, SAM binding domain SMAL_RS09450 PF02203 Tar ligand binding domain homologue SMAL_RS09450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS09450 PF00672 HAMP domain SMAL_RS09455 PF02203 Tar ligand binding domain homologue SMAL_RS09455 PF00672 HAMP domain SMAL_RS09455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS09465 PF01584 CheW-like domain SMAL_RS09470 PF07238 PilZ domain SMAL_RS09470 PF07317 Flagellar regulator YcgR SMAL_RS09475 PF02203 Tar ligand binding domain homologue SMAL_RS09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS09475 PF00672 HAMP domain SMAL_RS09480 PF09078 CheY binding SMAL_RS09480 PF01627 Hpt domain SMAL_RS09480 PF01584 CheW-like domain SMAL_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09480 PF02895 Signal transducing histidine kinase, homodimeric domain SMAL_RS09485 PF00072 Response regulator receiver domain SMAL_RS09495 PF01584 CheW-like domain SMAL_RS09500 PF13614 AAA domain SMAL_RS09505 PF13677 Membrane MotB of proton-channel complex MotA/MotB SMAL_RS09505 PF00691 OmpA family SMAL_RS09510 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS09515 PF02895 Signal transducing histidine kinase, homodimeric domain SMAL_RS09515 PF00072 Response regulator receiver domain SMAL_RS09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09515 PF01627 Hpt domain SMAL_RS09515 PF01584 CheW-like domain SMAL_RS09520 PF04344 Chemotaxis phosphatase, CheZ SMAL_RS09525 PF00072 Response regulator receiver domain SMAL_RS09530 PF04542 Sigma-70 region 2 SMAL_RS09530 PF04539 Sigma-70 region 3 SMAL_RS09530 PF04545 Sigma-70, region 4 SMAL_RS09535 PF10609 NUBPL iron-transfer P-loop NTPase SMAL_RS09540 PF00448 SRP54-type protein, GTPase domain SMAL_RS09545 PF00771 FHIPEP family SMAL_RS09550 PF01312 FlhB HrpN YscU SpaS Family SMAL_RS09555 PF03707 Bacterial signalling protein N terminal repeat SMAL_RS09555 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS09555 PF00563 EAL domain SMAL_RS09560 PF01311 Bacterial export proteins, family 1 SMAL_RS09565 PF01313 Bacterial export proteins, family 3 SMAL_RS09570 PF00813 FliP family SMAL_RS09575 PF04347 Flagellar biosynthesis protein, FliO SMAL_RS09580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SMAL_RS09585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SMAL_RS09585 PF02154 Flagellar motor switch protein FliM SMAL_RS09605 PF18269 T3SS EscN ATPase C-terminal domain SMAL_RS09605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMAL_RS09615 PF14841 FliG middle domain SMAL_RS09615 PF01706 FliG C-terminal domain SMAL_RS09615 PF14842 FliG N-terminal domain SMAL_RS09620 PF08345 Flagellar M-ring protein C-terminal SMAL_RS09620 PF01514 Secretory protein of YscJ/FliF family SMAL_RS09625 PF02049 Flagellar hook-basal body complex protein FliE SMAL_RS09635 PF00158 Sigma-54 interaction domain SMAL_RS09635 PF02954 Bacterial regulatory protein, Fis family SMAL_RS09635 PF06490 Flagellar regulatory protein FleQ SMAL_RS09640 PF00072 Response regulator receiver domain SMAL_RS09640 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS09645 PF04963 Sigma-54 factor, core binding domain SMAL_RS09645 PF00309 Sigma-54 factor, Activator interacting domain (AID) SMAL_RS09645 PF04552 Sigma-54, DNA binding domain SMAL_RS09650 PF00665 Integrase core domain SMAL_RS09655 PF00665 Integrase core domain SMAL_RS09660 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS09660 PF00072 Response regulator receiver domain SMAL_RS09675 PF02561 Flagellar protein FliS SMAL_RS09680 PF07195 Flagellar hook-associated protein 2 C-terminus SMAL_RS09680 PF02465 Flagellar hook-associated protein 2 N-terminus SMAL_RS09685 PF00700 Bacterial flagellin C-terminal helical region SMAL_RS09685 PF00669 Bacterial flagellin N-terminal helical region SMAL_RS09690 PF00669 Bacterial flagellin N-terminal helical region SMAL_RS09690 PF00700 Bacterial flagellin C-terminal helical region SMAL_RS09695 PF00669 Bacterial flagellin N-terminal helical region SMAL_RS09695 PF00700 Bacterial flagellin C-terminal helical region SMAL_RS09705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SMAL_RS09705 PF00460 Flagella basal body rod protein SMAL_RS09710 PF10135 Rod binding protein SMAL_RS09710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMAL_RS09715 PF02119 Flagellar P-ring protein SMAL_RS09720 PF02107 Flagellar L-ring protein SMAL_RS09725 PF00460 Flagella basal body rod protein SMAL_RS09725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SMAL_RS09730 PF00460 Flagella basal body rod protein SMAL_RS09730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SMAL_RS09735 PF07559 Flagellar basal body protein FlaE SMAL_RS09735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SMAL_RS09735 PF00460 Flagella basal body rod protein SMAL_RS09745 PF00460 Flagella basal body rod protein SMAL_RS09745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SMAL_RS09750 PF00460 Flagella basal body rod protein SMAL_RS09755 PF00072 Response regulator receiver domain SMAL_RS09755 PF01584 CheW-like domain SMAL_RS09775 PF13426 PAS domain SMAL_RS09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09775 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS09775 PF00989 PAS fold SMAL_RS09775 PF13188 PAS domain SMAL_RS09780 PF03707 Bacterial signalling protein N terminal repeat SMAL_RS09780 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS09780 PF00563 EAL domain SMAL_RS09785 PF07730 Histidine kinase SMAL_RS09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09790 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS09790 PF00563 EAL domain SMAL_RS09790 PF03707 Bacterial signalling protein N terminal repeat SMAL_RS09805 PF00672 HAMP domain SMAL_RS09805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS09805 PF12729 Four helix bundle sensory module for signal transduction SMAL_RS09810 PF04356 Protein of unknown function (DUF489) SMAL_RS09820 PF00293 NUDIX domain SMAL_RS09830 PF02617 ATP-dependent Clp protease adaptor protein ClpS SMAL_RS09835 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase SMAL_RS09840 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS09840 PF07724 AAA domain (Cdc48 subfamily) SMAL_RS09840 PF17871 AAA lid domain SMAL_RS09840 PF02861 Clp amino terminal domain, pathogenicity island component SMAL_RS09840 PF10431 C-terminal, D2-small domain, of ClpB protein SMAL_RS09855 PF01176 Translation initiation factor 1A / IF-1 SMAL_RS09860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SMAL_RS09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS09885 PF17854 FtsK alpha domain SMAL_RS09885 PF09397 Ftsk gamma domain SMAL_RS09885 PF01580 FtsK/SpoIIIE family SMAL_RS09885 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SMAL_RS09895 PF03548 Outer membrane lipoprotein carrier protein LolA SMAL_RS09900 PF12002 MgsA AAA+ ATPase C terminal SMAL_RS09900 PF16193 AAA C-terminal domain SMAL_RS09900 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS09905 PF05656 Protein of unknown function (DUF805) SMAL_RS09915 PF00756 Putative esterase SMAL_RS09925 PF01497 Periplasmic binding protein SMAL_RS09930 PF01032 FecCD transport family SMAL_RS09935 PF00005 ABC transporter SMAL_RS09945 PF00679 Elongation factor G C-terminus SMAL_RS09945 PF14492 Elongation Factor G, domain II SMAL_RS09945 PF03764 Elongation factor G, domain IV SMAL_RS09945 PF00009 Elongation factor Tu GTP binding domain SMAL_RS09945 PF03144 Elongation factor Tu domain 2 SMAL_RS09960 PF01627 Hpt domain SMAL_RS09960 PF00072 Response regulator receiver domain SMAL_RS09960 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS09960 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMAL_RS09965 PF00072 Response regulator receiver domain SMAL_RS09965 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS10000 PF01593 Flavin containing amine oxidoreductase SMAL_RS10015 PF08281 Sigma-70, region 4 SMAL_RS10015 PF04542 Sigma-70 region 2 SMAL_RS10025 PF13460 NAD(P)H-binding SMAL_RS10030 PF03073 TspO/MBR family SMAL_RS10040 PF00583 Acetyltransferase (GNAT) family SMAL_RS10045 PF02525 Flavodoxin-like fold SMAL_RS10050 PF07681 DoxX SMAL_RS10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS10055 PF03466 LysR substrate binding domain SMAL_RS10060 PF05726 Pirin C-terminal cupin domain SMAL_RS10060 PF02678 Pirin SMAL_RS10105 PF03960 ArsC family SMAL_RS10110 PF03358 NADPH-dependent FMN reductase SMAL_RS10125 PF01758 Sodium Bile acid symporter family SMAL_RS10130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS10170 PF13478 XdhC Rossmann domain SMAL_RS10170 PF02625 XdhC and CoxI family SMAL_RS10175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SMAL_RS10175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SMAL_RS10180 PF03450 CO dehydrogenase flavoprotein C-terminal domain SMAL_RS10180 PF00941 FAD binding domain in molybdopterin dehydrogenase SMAL_RS10185 PF10518 TAT (twin-arginine translocation) pathway signal sequence SMAL_RS10185 PF00111 2Fe-2S iron-sulfur cluster binding domain SMAL_RS10185 PF01799 [2Fe-2S] binding domain SMAL_RS10190 PF02566 OsmC-like protein SMAL_RS10200 PF03466 LysR substrate binding domain SMAL_RS10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS10220 PF08281 Sigma-70, region 4 SMAL_RS10220 PF12680 SnoaL-like domain SMAL_RS10220 PF04542 Sigma-70 region 2 SMAL_RS10225 PF00753 Metallo-beta-lactamase superfamily SMAL_RS10225 PF16123 Hydroxyacylglutathione hydrolase C-terminus SMAL_RS10240 PF00561 alpha/beta hydrolase fold SMAL_RS10250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMAL_RS10255 PF00106 short chain dehydrogenase SMAL_RS10260 PF00107 Zinc-binding dehydrogenase SMAL_RS10260 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS10265 PF17755 UvrA DNA-binding domain SMAL_RS10270 PF03466 LysR substrate binding domain SMAL_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS10275 PF07690 Major Facilitator Superfamily SMAL_RS10280 PF00248 Aldo/keto reductase family SMAL_RS10290 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SMAL_RS10300 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS10300 PF07660 Secretin and TonB N terminus short domain SMAL_RS10300 PF00593 TonB dependent receptor SMAL_RS10325 PF12833 Helix-turn-helix domain SMAL_RS10325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SMAL_RS10335 PF00873 AcrB/AcrD/AcrF family SMAL_RS10350 PF08361 MAATS-type transcriptional repressor, C-terminal region SMAL_RS10350 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS10355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SMAL_RS10360 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS10365 PF00381 PTS HPr component phosphorylation site SMAL_RS10365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMAL_RS10365 PF02896 PEP-utilising enzyme, TIM barrel domain SMAL_RS10365 PF00391 PEP-utilising enzyme, mobile domain SMAL_RS10365 PF05524 PEP-utilising enzyme, N-terminal SMAL_RS10370 PF00294 pfkB family carbohydrate kinase SMAL_RS10375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMAL_RS10385 PF02469 Fasciclin domain SMAL_RS10405 PF02219 Methylenetetrahydrofolate reductase SMAL_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS10410 PF03466 LysR substrate binding domain SMAL_RS10415 PF03358 NADPH-dependent FMN reductase SMAL_RS10425 PF01717 Cobalamin-independent synthase, Catalytic domain SMAL_RS10435 PF03600 Citrate transporter SMAL_RS10440 PF00005 ABC transporter SMAL_RS10440 PF00664 ABC transporter transmembrane region SMAL_RS10445 PF00593 TonB dependent receptor SMAL_RS10445 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS10460 PF00005 ABC transporter SMAL_RS10480 PF02311 AraC-like ligand binding domain SMAL_RS10480 PF12833 Helix-turn-helix domain SMAL_RS10485 PF10503 Esterase PHB depolymerase SMAL_RS10490 PF00593 TonB dependent receptor SMAL_RS10490 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS10495 PF00561 alpha/beta hydrolase fold SMAL_RS10500 PF01575 MaoC like domain SMAL_RS10505 PF00672 HAMP domain SMAL_RS10505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS10505 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS10510 PF00072 Response regulator receiver domain SMAL_RS10510 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS10515 PF13193 AMP-binding enzyme C-terminal domain SMAL_RS10515 PF00501 AMP-binding enzyme SMAL_RS10525 PF07729 FCD domain SMAL_RS10525 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS10535 PF14592 Chondroitinase B SMAL_RS10540 PF05426 Alginate lyase SMAL_RS10540 PF07940 Heparinase II/III-like protein SMAL_RS10545 PF07690 Major Facilitator Superfamily SMAL_RS10560 PF00294 pfkB family carbohydrate kinase SMAL_RS10590 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS10600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMAL_RS10605 PF01209 ubiE/COQ5 methyltransferase family SMAL_RS10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS10615 PF03466 LysR substrate binding domain SMAL_RS10640 PF02954 Bacterial regulatory protein, Fis family SMAL_RS10640 PF00072 Response regulator receiver domain SMAL_RS10640 PF00158 Sigma-54 interaction domain SMAL_RS10730 PF02954 Bacterial regulatory protein, Fis family SMAL_RS10730 PF00072 Response regulator receiver domain SMAL_RS10730 PF00158 Sigma-54 interaction domain SMAL_RS10750 PF13350 Tyrosine phosphatase family SMAL_RS10755 PF00593 TonB dependent receptor SMAL_RS10755 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS10775 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS10775 PF08447 PAS fold SMAL_RS10775 PF00563 EAL domain SMAL_RS10775 PF13426 PAS domain SMAL_RS10775 PF08448 PAS fold SMAL_RS10775 PF05231 MASE1 SMAL_RS10780 PF02687 FtsX-like permease family SMAL_RS10780 PF00005 ABC transporter SMAL_RS10780 PF12704 MacB-like periplasmic core domain SMAL_RS10785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS10795 PF00072 Response regulator receiver domain SMAL_RS10795 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS10800 PF00672 HAMP domain SMAL_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS10800 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS10820 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS10820 PF00593 TonB dependent receptor SMAL_RS10840 PF06224 Winged helix DNA-binding domain SMAL_RS10850 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS10850 PF00593 TonB dependent receptor SMAL_RS10865 PF00561 alpha/beta hydrolase fold SMAL_RS10880 PF00690 Cation transporter/ATPase, N-terminus SMAL_RS10880 PF00689 Cation transporting ATPase, C-terminus SMAL_RS10885 PF02308 MgtC family SMAL_RS10890 PF13493 Domain of unknown function (DUF4118) SMAL_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS10890 PF13426 PAS domain SMAL_RS10890 PF08447 PAS fold SMAL_RS10890 PF00989 PAS fold SMAL_RS10890 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS10895 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS10895 PF00072 Response regulator receiver domain SMAL_RS10905 PF06772 Bacterial low temperature requirement A protein (LtrA) SMAL_RS10930 PF00753 Metallo-beta-lactamase superfamily SMAL_RS10940 PF00384 Molybdopterin oxidoreductase SMAL_RS10945 PF02634 FdhD/NarQ family SMAL_RS10965 PF07690 Major Facilitator Superfamily SMAL_RS10990 PF00005 ABC transporter SMAL_RS11005 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS11005 PF00593 TonB dependent receptor SMAL_RS11015 PF04234 CopC domain SMAL_RS11020 PF05425 Copper resistance protein D SMAL_RS11025 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS11025 PF00072 Response regulator receiver domain SMAL_RS11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS11030 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS11030 PF00672 HAMP domain SMAL_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS11035 PF03466 LysR substrate binding domain SMAL_RS11045 PF00873 AcrB/AcrD/AcrF family SMAL_RS11050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS11050 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS11060 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS11060 PF00072 Response regulator receiver domain SMAL_RS11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS11065 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS11070 PF07971 Glycosyl hydrolase family 92 SMAL_RS11070 PF17678 Glycosyl hydrolase family 92 N-terminal domain SMAL_RS11075 PF00085 Thioredoxin SMAL_RS11090 PF08946 Osmosensory transporter coiled coil SMAL_RS11090 PF00083 Sugar (and other) transporter SMAL_RS11110 PF07536 HWE histidine kinase SMAL_RS11110 PF08447 PAS fold SMAL_RS11110 PF13426 PAS domain SMAL_RS11115 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS11115 PF00072 Response regulator receiver domain SMAL_RS11130 PF07660 Secretin and TonB N terminus short domain SMAL_RS11130 PF00593 TonB dependent receptor SMAL_RS11130 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS11145 PF03466 LysR substrate binding domain SMAL_RS11150 PF02678 Pirin SMAL_RS11150 PF05726 Pirin C-terminal cupin domain SMAL_RS11155 PF00857 Isochorismatase family SMAL_RS11160 PF00857 Isochorismatase family SMAL_RS11170 PF12848 ABC transporter SMAL_RS11170 PF00005 ABC transporter SMAL_RS11190 PF02472 Biopolymer transport protein ExbD/TolR SMAL_RS11195 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS11215 PF12019 Type II transport protein GspH SMAL_RS11215 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS11220 PF02501 Type II secretion system (T2SS), protein I SMAL_RS11220 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS11225 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS11225 PF11612 Type II secretion system (T2SS), protein J SMAL_RS11235 PF12849 PBP superfamily domain SMAL_RS11240 PF12849 PBP superfamily domain SMAL_RS11245 PF00482 Type II secretion system (T2SS), protein F SMAL_RS11250 PF00437 Type II/IV secretion system protein SMAL_RS11255 PF00263 Bacterial type II and III secretion system protein SMAL_RS11255 PF03958 Bacterial type II/III secretion system short domain SMAL_RS11275 PF08334 Type II secretion system (T2SS), protein G SMAL_RS11275 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS11305 PF01037 Lrp/AsnC ligand binding domain SMAL_RS11320 PF08447 PAS fold SMAL_RS11320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS11325 PF00667 FAD binding domain SMAL_RS11325 PF00258 Flavodoxin SMAL_RS11325 PF00175 Oxidoreductase NAD-binding domain SMAL_RS11330 PF03459 TOBE domain SMAL_RS11330 PF00005 ABC transporter SMAL_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS11345 PF13545 Crp-like helix-turn-helix domain SMAL_RS11345 PF00027 Cyclic nucleotide-binding domain SMAL_RS11350 PF04055 Radical SAM superfamily SMAL_RS11350 PF06969 HemN C-terminal domain SMAL_RS11355 PF07690 Major Facilitator Superfamily SMAL_RS11360 PF09312 SurA N-terminal domain SMAL_RS11360 PF00639 PPIC-type PPIASE domain SMAL_RS11365 PF02665 Nitrate reductase gamma subunit SMAL_RS11370 PF02613 Nitrate reductase delta subunit SMAL_RS11375 PF13247 4Fe-4S dicluster domain SMAL_RS11375 PF14711 Respiratory nitrate reductase beta C-terminal SMAL_RS11380 PF00384 Molybdopterin oxidoreductase SMAL_RS11380 PF01568 Molydopterin dinucleotide binding domain SMAL_RS11380 PF14710 Respiratory nitrate reductase alpha N-terminal SMAL_RS11385 PF07690 Major Facilitator Superfamily SMAL_RS11395 PF12804 MobA-like NTP transferase domain SMAL_RS11400 PF02391 MoaE protein SMAL_RS11410 PF03453 MoeA N-terminal region (domain I and II) SMAL_RS11410 PF03454 MoeA C-terminal region (domain IV) SMAL_RS11410 PF00994 Probable molybdopterin binding domain SMAL_RS11415 PF01967 MoaC family SMAL_RS11415 PF00994 Probable molybdopterin binding domain SMAL_RS11420 PF04055 Radical SAM superfamily SMAL_RS11420 PF06463 Molybdenum Cofactor Synthesis C SMAL_RS11460 PF12833 Helix-turn-helix domain SMAL_RS11460 PF02311 AraC-like ligand binding domain SMAL_RS11475 PF13533 Biotin-lipoyl like SMAL_RS11480 PF02321 Outer membrane efflux protein SMAL_RS11505 PF01219 Prokaryotic diacylglycerol kinase SMAL_RS11535 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS11535 PF01548 Transposase SMAL_RS11550 PF00106 short chain dehydrogenase SMAL_RS11555 PF00975 Thioesterase domain SMAL_RS11555 PF00550 Phosphopantetheine attachment site SMAL_RS11555 PF00668 Condensation domain SMAL_RS11555 PF00501 AMP-binding enzyme SMAL_RS11560 PF00857 Isochorismatase family SMAL_RS11560 PF00550 Phosphopantetheine attachment site SMAL_RS11565 PF00550 Phosphopantetheine attachment site SMAL_RS11565 PF00857 Isochorismatase family SMAL_RS11570 PF00501 AMP-binding enzyme SMAL_RS11570 PF13193 AMP-binding enzyme C-terminal domain SMAL_RS11575 PF00425 chorismate binding enzyme SMAL_RS11580 PF07690 Major Facilitator Superfamily SMAL_RS11585 PF12823 Domain of unknown function (DUF3817) SMAL_RS11585 PF03176 MMPL family SMAL_RS11590 PF00296 Luciferase-like monooxygenase SMAL_RS11605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMAL_RS11605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMAL_RS11610 PF01613 Flavin reductase like domain SMAL_RS11620 PF00487 Fatty acid desaturase SMAL_RS11625 PF00970 Oxidoreductase FAD-binding domain SMAL_RS11625 PF00111 2Fe-2S iron-sulfur cluster binding domain SMAL_RS11625 PF00175 Oxidoreductase NAD-binding domain SMAL_RS11630 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS11635 PF03797 Autotransporter beta-domain SMAL_RS11640 PF00593 TonB dependent receptor SMAL_RS11640 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS11650 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMAL_RS11650 PF02742 Iron dependent repressor, metal binding and dimerisation domain SMAL_RS11655 PF01566 Natural resistance-associated macrophage protein SMAL_RS11660 PF00085 Thioredoxin SMAL_RS11670 PF00268 Ribonucleotide reductase, small chain SMAL_RS11675 PF00317 Ribonucleotide reductase, all-alpha domain SMAL_RS11675 PF02867 Ribonucleotide reductase, barrel domain SMAL_RS11675 PF03477 ATP cone domain SMAL_RS11680 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS11680 PF16197 Ketoacyl-synthetase C-terminal extension SMAL_RS11680 PF00109 Beta-ketoacyl synthase, N-terminal domain SMAL_RS11680 PF14765 Polyketide synthase dehydratase SMAL_RS11680 PF00698 Acyl transferase domain SMAL_RS11680 PF00550 Phosphopantetheine attachment site SMAL_RS11680 PF08659 KR domain SMAL_RS11680 PF02801 Beta-ketoacyl synthase, C-terminal domain SMAL_RS11685 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS11685 PF00593 TonB dependent receptor SMAL_RS11690 PF02028 BCCT, betaine/carnitine/choline family transporter SMAL_RS11715 PF00893 Small Multidrug Resistance protein SMAL_RS11720 PF00893 Small Multidrug Resistance protein SMAL_RS11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS11725 PF03466 LysR substrate binding domain SMAL_RS11735 PF07660 Secretin and TonB N terminus short domain SMAL_RS11735 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS11735 PF00593 TonB dependent receptor SMAL_RS11740 PF00654 Voltage gated chloride channel SMAL_RS11745 PF02308 MgtC family SMAL_RS11755 PF08241 Methyltransferase domain SMAL_RS11765 PF00691 OmpA family SMAL_RS11770 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS11770 PF03895 YadA-like membrane anchor domain SMAL_RS11770 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS11770 PF03895 YadA-like membrane anchor domain SMAL_RS11770 PF05662 Coiled stalk of trimeric autotransporter adhesin SMAL_RS11770 PF05658 Head domain of trimeric autotransporter adhesin SMAL_RS11770 PF05662 Coiled stalk of trimeric autotransporter adhesin SMAL_RS11770 PF05658 Head domain of trimeric autotransporter adhesin SMAL_RS11800 PF04972 BON domain SMAL_RS11800 PF13629 Pilus formation protein N terminal region SMAL_RS11800 PF00263 Bacterial type II and III secretion system protein SMAL_RS11810 PF00437 Type II/IV secretion system protein SMAL_RS11850 PF00561 alpha/beta hydrolase fold SMAL_RS11855 PF05977 Transmembrane secretion effector SMAL_RS11865 PF01979 Amidohydrolase family SMAL_RS11880 PF12833 Helix-turn-helix domain SMAL_RS11880 PF10114 Sensory domain found in PocR SMAL_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS11890 PF00672 HAMP domain SMAL_RS11890 PF07730 Histidine kinase SMAL_RS11890 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SMAL_RS11895 PF00072 Response regulator receiver domain SMAL_RS11895 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS11900 PF07676 WD40-like Beta Propeller Repeat SMAL_RS11900 PF00326 Prolyl oligopeptidase family SMAL_RS11905 PF12431 Transcriptional regulator SMAL_RS11905 PF00072 Response regulator receiver domain SMAL_RS11910 PF07694 5TMR of 5TMR-LYT SMAL_RS11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS11910 PF06580 Histidine kinase SMAL_RS11915 PF01979 Amidohydrolase family SMAL_RS11915 PF13382 Adenine deaminase C-terminal domain SMAL_RS11925 PF03466 LysR substrate binding domain SMAL_RS11925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS11935 PF01979 Amidohydrolase family SMAL_RS11955 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS11955 PF00593 TonB dependent receptor SMAL_RS11965 PF02611 CDP-diacylglycerol pyrophosphatase SMAL_RS11985 PF01565 FAD binding domain SMAL_RS11985 PF09330 D-lactate dehydrogenase, membrane binding SMAL_RS11990 PF01070 FMN-dependent dehydrogenase SMAL_RS11995 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS11995 PF07729 FCD domain SMAL_RS12000 PF02652 L-lactate permease SMAL_RS12005 PF02308 MgtC family SMAL_RS12015 PF12833 Helix-turn-helix domain SMAL_RS12040 PF07690 Major Facilitator Superfamily SMAL_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS12045 PF03466 LysR substrate binding domain SMAL_RS12050 PF07691 PA14 domain SMAL_RS12050 PF00933 Glycosyl hydrolase family 3 N terminal domain SMAL_RS12050 PF14310 Fibronectin type III-like domain SMAL_RS12050 PF01915 Glycosyl hydrolase family 3 C-terminal domain SMAL_RS12070 PF03466 LysR substrate binding domain SMAL_RS12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS12095 PF01336 OB-fold nucleic acid binding domain SMAL_RS12095 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMAL_RS12095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMAL_RS12095 PF02811 PHP domain SMAL_RS12095 PF14579 Helix-hairpin-helix motif SMAL_RS12105 PF00155 Aminotransferase class I and II SMAL_RS12105 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS12110 PF01168 Alanine racemase, N-terminal domain SMAL_RS12115 PF02540 NAD synthase SMAL_RS12115 PF00958 GMP synthase C terminal domain SMAL_RS12115 PF00117 Glutamine amidotransferase class-I SMAL_RS12130 PF04542 Sigma-70 region 2 SMAL_RS12130 PF08281 Sigma-70, region 4 SMAL_RS12140 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS12140 PF00593 TonB dependent receptor SMAL_RS12160 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SMAL_RS12160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SMAL_RS12160 PF01276 Orn/Lys/Arg decarboxylase, major domain SMAL_RS12165 PF13520 Amino acid permease SMAL_RS12175 PF13098 Thioredoxin-like domain SMAL_RS12180 PF00578 AhpC/TSA family SMAL_RS12190 PF13411 MerR HTH family regulatory protein SMAL_RS12250 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS12255 PF13426 PAS domain SMAL_RS12255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS12255 PF08447 PAS fold SMAL_RS12275 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS12275 PF08447 PAS fold SMAL_RS12275 PF13426 PAS domain SMAL_RS12275 PF08448 PAS fold SMAL_RS12275 PF00563 EAL domain SMAL_RS12275 PF05231 MASE1 SMAL_RS12280 PF00575 S1 RNA binding domain SMAL_RS12280 PF16921 Tex protein YqgF-like domain SMAL_RS12280 PF17674 HHH domain SMAL_RS12280 PF09371 Tex-like protein N-terminal domain SMAL_RS12300 PF17263 Family of unknown function (DUF5329) SMAL_RS12305 PF00561 alpha/beta hydrolase fold SMAL_RS12320 PF08241 Methyltransferase domain SMAL_RS12320 PF12697 Alpha/beta hydrolase family SMAL_RS12335 PF03618 Kinase/pyrophosphorylase SMAL_RS12340 PF00391 PEP-utilising enzyme, mobile domain SMAL_RS12340 PF02896 PEP-utilising enzyme, TIM barrel domain SMAL_RS12340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SMAL_RS12345 PF05552 Conserved TM helix SMAL_RS12345 PF00924 Mechanosensitive ion channel SMAL_RS12350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMAL_RS12360 PF00929 Exonuclease SMAL_RS12365 PF14437 MafB19-like deaminase SMAL_RS12370 PF01638 HxlR-like helix-turn-helix SMAL_RS12375 PF02525 Flavodoxin-like fold SMAL_RS12380 PF13673 Acetyltransferase (GNAT) domain SMAL_RS12440 PF03135 CagE, TrbE, VirB family, component of type IV transporter system SMAL_RS12450 PF04956 TrbC/VIRB2 family SMAL_RS12455 PF01464 Transglycosylase SLT domain SMAL_RS12460 PF00437 Type II/IV secretion system protein SMAL_RS12465 PF03743 Bacterial conjugation TrbI-like protein SMAL_RS12475 PF04335 VirB8 protein SMAL_RS12490 PF02534 Type IV secretory system Conjugative DNA transfer SMAL_RS12500 PF07690 Major Facilitator Superfamily SMAL_RS12505 PF00376 MerR family regulatory protein SMAL_RS12505 PF09278 MerR, DNA binding SMAL_RS12510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMAL_RS12510 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS12530 PF01494 FAD binding domain SMAL_RS12535 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS12535 PF17754 MftR C-terminal domain SMAL_RS12540 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS12540 PF00593 TonB dependent receptor SMAL_RS12550 PF00072 Response regulator receiver domain SMAL_RS12550 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS12555 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS12570 PF12704 MacB-like periplasmic core domain SMAL_RS12570 PF02687 FtsX-like permease family SMAL_RS12570 PF00005 ABC transporter SMAL_RS12600 PF01638 HxlR-like helix-turn-helix SMAL_RS12605 PF00107 Zinc-binding dehydrogenase SMAL_RS12605 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS12620 PF13361 UvrD-like helicase C-terminal domain SMAL_RS12620 PF00580 UvrD/REP helicase N-terminal domain SMAL_RS12620 PF12462 DNA helicase IV / RNA helicase N terminal SMAL_RS12890 PF03466 LysR substrate binding domain SMAL_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS12895 PF02525 Flavodoxin-like fold SMAL_RS12905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMAL_RS12905 PF02403 Seryl-tRNA synthetase N-terminal domain SMAL_RS12910 PF03544 Gram-negative bacterial TonB protein C-terminal SMAL_RS12920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMAL_RS12925 PF00800 Prephenate dehydratase SMAL_RS12925 PF01842 ACT domain SMAL_RS12925 PF01817 Chorismate mutase type II SMAL_RS12930 PF00266 Aminotransferase class-V SMAL_RS12970 PF07969 Amidohydrolase family SMAL_RS12975 PF00221 Aromatic amino acid lyase SMAL_RS12985 PF01175 Urocanase Rossmann-like domain SMAL_RS12985 PF17392 Urocanase C-terminal domain SMAL_RS12985 PF17391 Urocanase N-terminal domain SMAL_RS12990 PF00144 Beta-lactamase SMAL_RS12995 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS12995 PF01548 Transposase SMAL_RS13020 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS13030 PF04371 Porphyromonas-type peptidyl-arginine deiminase SMAL_RS13035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS13035 PF03466 LysR substrate binding domain SMAL_RS13090 PF00144 Beta-lactamase SMAL_RS13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS13100 PF03466 LysR substrate binding domain SMAL_RS13105 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS13105 PF00107 Zinc-binding dehydrogenase SMAL_RS13110 PF13360 PQQ-like domain SMAL_RS13115 PF00521 DNA gyrase/topoisomerase IV, subunit A SMAL_RS13115 PF03989 DNA gyrase C-terminal domain, beta-propeller SMAL_RS13120 PF01008 Initiation factor 2 subunit family SMAL_RS13130 PF00152 tRNA synthetases class II (D, K and N) SMAL_RS13140 PF01653 NAD-dependent DNA ligase adenylation domain SMAL_RS13140 PF00533 BRCA1 C Terminus (BRCT) domain SMAL_RS13140 PF12826 Helix-hairpin-helix motif SMAL_RS13140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SMAL_RS13140 PF03120 NAD-dependent DNA ligase OB-fold domain SMAL_RS13145 PF00155 Aminotransferase class I and II SMAL_RS13150 PF04354 ZipA, C-terminal FtsZ-binding domain SMAL_RS13155 PF02463 RecF/RecN/SMC N terminal domain SMAL_RS13160 PF03948 Ribosomal protein L9, C-terminal domain SMAL_RS13160 PF01281 Ribosomal protein L9, N-terminal domain SMAL_RS13165 PF01084 Ribosomal protein S18 SMAL_RS13170 PF01250 Ribosomal protein S6 SMAL_RS13175 PF03691 Uncharacterised protein family (UPF0167) SMAL_RS13180 PF01521 Iron-sulphur cluster biosynthesis SMAL_RS13185 PF00152 tRNA synthetases class II (D, K and N) SMAL_RS13185 PF01336 OB-fold nucleic acid binding domain SMAL_RS13200 PF04299 Putative FMN-binding domain SMAL_RS13205 PF00484 Carbonic anhydrase SMAL_RS13210 PF06052 3-hydroxyanthranilic acid dioxygenase SMAL_RS13215 PF00266 Aminotransferase class-V SMAL_RS13220 PF01494 FAD binding domain SMAL_RS13225 PF00929 Exonuclease SMAL_RS13225 PF08411 Exonuclease C-terminal SMAL_RS13245 PF01513 ATP-NAD kinase SMAL_RS13250 PF05088 Bacterial NAD-glutamate dehydrogenase SMAL_RS13260 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS13260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS13265 PF00873 AcrB/AcrD/AcrF family SMAL_RS13270 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS13270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS13270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMAL_RS13275 PF13847 Methyltransferase domain SMAL_RS13275 PF03551 Transcriptional regulator PadR-like family SMAL_RS13280 PF02574 Homocysteine S-methyltransferase SMAL_RS13280 PF00809 Pterin binding enzyme SMAL_RS13280 PF02965 Vitamin B12 dependent methionine synthase, activation domain SMAL_RS13280 PF02310 B12 binding domain SMAL_RS13280 PF02607 B12 binding domain SMAL_RS13285 PF02965 Vitamin B12 dependent methionine synthase, activation domain SMAL_RS13285 PF02607 B12 binding domain SMAL_RS13285 PF02574 Homocysteine S-methyltransferase SMAL_RS13285 PF00809 Pterin binding enzyme SMAL_RS13285 PF02310 B12 binding domain SMAL_RS13300 PF04102 SlyX SMAL_RS13305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SMAL_RS13305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SMAL_RS13305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SMAL_RS13310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SMAL_RS13310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMAL_RS13315 PF00255 Glutathione peroxidase SMAL_RS13320 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS13325 PF00005 ABC transporter SMAL_RS13350 PF10415 Fumarase C C-terminus SMAL_RS13350 PF00206 Lyase SMAL_RS13355 PF08328 Adenylosuccinate lyase C-terminal SMAL_RS13355 PF00206 Lyase SMAL_RS13360 PF08007 Cupin superfamily protein SMAL_RS13370 PF16078 2-oxoglutarate dehydrogenase N-terminus SMAL_RS13370 PF00676 Dehydrogenase E1 component SMAL_RS13370 PF16870 2-oxoglutarate dehydrogenase C-terminal SMAL_RS13370 PF02779 Transketolase, pyrimidine binding domain SMAL_RS13375 PF02817 e3 binding domain SMAL_RS13375 PF00364 Biotin-requiring enzyme SMAL_RS13375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMAL_RS13380 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS13380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMAL_RS13395 PF09423 PhoD-like phosphatase SMAL_RS13395 PF16655 PhoD-like phosphatase, N-terminal domain SMAL_RS13405 PF03796 DnaB-like helicase C terminal domain SMAL_RS13405 PF00772 DnaB-like helicase N terminal domain SMAL_RS13410 PF03358 NADPH-dependent FMN reductase SMAL_RS13415 PF13537 Glutamine amidotransferase domain SMAL_RS13415 PF00733 Asparagine synthase SMAL_RS13420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SMAL_RS13420 PF02780 Transketolase, C-terminal domain SMAL_RS13420 PF02779 Transketolase, pyrimidine binding domain SMAL_RS13425 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS13445 PF01026 TatD related DNase SMAL_RS13450 PF00899 ThiF family SMAL_RS13455 PF01322 Cytochrome C' SMAL_RS13465 PF00313 'Cold-shock' DNA-binding domain SMAL_RS13475 PF02253 Phospholipase A1 SMAL_RS13480 PF03960 ArsC family SMAL_RS13485 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS13485 PF13417 Glutathione S-transferase, N-terminal domain SMAL_RS13495 PF05683 Fumarase C-terminus SMAL_RS13495 PF05681 Fumarate hydratase (Fumerase) SMAL_RS13500 PF04542 Sigma-70 region 2 SMAL_RS13500 PF12680 SnoaL-like domain SMAL_RS13500 PF08281 Sigma-70, region 4 SMAL_RS13505 PF02627 Carboxymuconolactone decarboxylase family SMAL_RS13510 PF00005 ABC transporter SMAL_RS13515 PF00970 Oxidoreductase FAD-binding domain SMAL_RS13515 PF00175 Oxidoreductase NAD-binding domain SMAL_RS13520 PF00255 Glutathione peroxidase SMAL_RS13525 PF01432 Peptidase family M3 SMAL_RS13550 PF01694 Rhomboid family SMAL_RS13555 PF00854 POT family SMAL_RS13565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMAL_RS13565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMAL_RS13570 PF00545 ribonuclease SMAL_RS13585 PF01106 NifU-like domain SMAL_RS13590 PF01329 Pterin 4 alpha carbinolamine dehydratase SMAL_RS13600 PF02535 ZIP Zinc transporter SMAL_RS13605 PF00849 RNA pseudouridylate synthase SMAL_RS13605 PF01479 S4 domain SMAL_RS13610 PF10150 Ribonuclease E/G family SMAL_RS13610 PF00575 S1 RNA binding domain SMAL_RS13610 PF12111 Polyribonucleotide phosphorylase C terminal SMAL_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS13635 PF01547 Bacterial extracellular solute-binding protein SMAL_RS13650 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS13655 PF01722 BolA-like protein SMAL_RS13660 PF03795 YCII-related domain SMAL_RS13670 PF02616 Segregation and condensation protein ScpA SMAL_RS13675 PF04079 Segregation and condensation complex subunit ScpB SMAL_RS13680 PF00849 RNA pseudouridylate synthase SMAL_RS13680 PF01479 S4 domain SMAL_RS13690 PF07690 Major Facilitator Superfamily SMAL_RS13710 PF00795 Carbon-nitrogen hydrolase SMAL_RS13715 PF00155 Aminotransferase class I and II SMAL_RS13720 PF00005 ABC transporter SMAL_RS13725 PF03379 CcmB protein SMAL_RS13730 PF01578 Cytochrome C assembly protein SMAL_RS13740 PF03100 CcmE SMAL_RS13745 PF01578 Cytochrome C assembly protein SMAL_RS13745 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SMAL_RS13750 PF08534 Redoxin SMAL_RS13755 PF03918 Cytochrome C biogenesis protein SMAL_RS13765 PF00561 alpha/beta hydrolase fold SMAL_RS13775 PF00005 ABC transporter SMAL_RS13775 PF00664 ABC transporter transmembrane region SMAL_RS13780 PF00005 ABC transporter SMAL_RS13780 PF00664 ABC transporter transmembrane region SMAL_RS13785 PF01654 Cytochrome bd terminal oxidase subunit I SMAL_RS13790 PF02322 Cytochrome bd terminal oxidase subunit II SMAL_RS13820 PF01522 Polysaccharide deacetylase SMAL_RS13820 PF14883 Hypothetical glycosyl hydrolase family 13 SMAL_RS13825 PF00535 Glycosyl transferase family 2 SMAL_RS13835 PF00171 Aldehyde dehydrogenase family SMAL_RS13840 PF01472 PUA domain SMAL_RS13840 PF00696 Amino acid kinase family SMAL_RS13850 PF00206 Lyase SMAL_RS13855 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMAL_RS13865 PF00696 Amino acid kinase family SMAL_RS13865 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase SMAL_RS13870 PF07687 Peptidase dimerisation domain SMAL_RS13870 PF01546 Peptidase family M20/M25/M40 SMAL_RS13875 PF00764 Arginosuccinate synthase SMAL_RS13880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMAL_RS13880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMAL_RS13890 PF09190 DALR domain SMAL_RS13890 PF01406 tRNA synthetases class I (C) catalytic domain SMAL_RS13895 PF02657 Fe-S metabolism associated domain SMAL_RS13905 PF01258 Prokaryotic dksA/traR C4-type zinc finger SMAL_RS13910 PF01809 Putative membrane protein insertion efficiency factor SMAL_RS13915 PF01979 Amidohydrolase family SMAL_RS13920 PF01551 Peptidase family M23 SMAL_RS13920 PF08460 Bacterial SH3 domain SMAL_RS13930 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS13940 PF01979 Amidohydrolase family SMAL_RS13945 PF01132 Elongation factor P (EF-P) OB domain SMAL_RS13945 PF08207 Elongation factor P (EF-P) KOW-like domain SMAL_RS13945 PF09285 Elongation factor P, C-terminal SMAL_RS13950 PF04055 Radical SAM superfamily SMAL_RS13955 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS13955 PF00563 EAL domain SMAL_RS13955 PF03707 Bacterial signalling protein N terminal repeat SMAL_RS13955 PF13188 PAS domain SMAL_RS13965 PF00588 SpoU rRNA Methylase family SMAL_RS13970 PF00459 Inositol monophosphatase family SMAL_RS13975 PF01435 Peptidase family M48 SMAL_RS13980 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMAL_RS13985 PF00106 short chain dehydrogenase SMAL_RS13990 PF05233 PHB accumulation regulatory domain SMAL_RS13990 PF07879 PHB/PHA accumulation regulator DNA-binding domain SMAL_RS14005 PF08676 MutL C terminal dimerisation domain SMAL_RS14005 PF01119 DNA mismatch repair protein, C-terminal domain SMAL_RS14010 PF01520 N-acetylmuramoyl-L-alanine amidase SMAL_RS14010 PF11741 AMIN domain SMAL_RS14015 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMAL_RS14020 PF03853 YjeF-related protein N-terminus SMAL_RS14020 PF01256 Carbohydrate kinase SMAL_RS14025 PF08331 Domain of unknown function (DUF1730) SMAL_RS14030 PF02601 Exonuclease VII, large subunit SMAL_RS14030 PF13742 OB-fold nucleic acid binding domain SMAL_RS14040 PF03781 Sulfatase-modifying factor enzyme 1 SMAL_RS14045 PF01612 3'-5' exonuclease SMAL_RS14045 PF00570 HRDC domain SMAL_RS14055 PF00593 TonB dependent receptor SMAL_RS14055 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS14060 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS14070 PF00561 alpha/beta hydrolase fold SMAL_RS14075 PF07859 alpha/beta hydrolase fold SMAL_RS14095 PF02805 Metal binding domain of Ada SMAL_RS14095 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMAL_RS14095 PF12833 Helix-turn-helix domain SMAL_RS14095 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMAL_RS14100 PF16884 N-terminal domain of oxidoreductase SMAL_RS14100 PF00107 Zinc-binding dehydrogenase SMAL_RS14130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMAL_RS14130 PF12806 Acetyl-CoA dehydrogenase C-terminal like SMAL_RS14130 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS14130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS14140 PF02780 Transketolase, C-terminal domain SMAL_RS14140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SMAL_RS14140 PF02779 Transketolase, pyrimidine binding domain SMAL_RS14170 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS14170 PF17932 Tetracyclin repressor-like, C-terminal domain SMAL_RS14175 PF00893 Small Multidrug Resistance protein SMAL_RS14185 PF01810 LysE type translocator SMAL_RS14190 PF00574 Clp protease SMAL_RS14200 PF01022 Bacterial regulatory protein, arsR family SMAL_RS14205 PF01177 Asp/Glu/Hydantoin racemase SMAL_RS14225 PF00583 Acetyltransferase (GNAT) family SMAL_RS14240 PF00216 Bacterial DNA-binding protein SMAL_RS14245 PF03484 tRNA synthetase B5 domain SMAL_RS14245 PF03483 B3/4 domain SMAL_RS14245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SMAL_RS14245 PF03147 Ferredoxin-fold anticodon binding domain SMAL_RS14245 PF01588 Putative tRNA binding domain SMAL_RS14250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SMAL_RS14250 PF01409 tRNA synthetases class II core domain (F) SMAL_RS14255 PF00453 Ribosomal protein L20 SMAL_RS14260 PF01632 Ribosomal protein L35 SMAL_RS14265 PF00707 Translation initiation factor IF-3, C-terminal domain SMAL_RS14265 PF05198 Translation initiation factor IF-3, N-terminal domain SMAL_RS14270 PF03129 Anticodon binding domain SMAL_RS14270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMAL_RS14270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMAL_RS14270 PF02824 TGS domain SMAL_RS14290 PF00041 Fibronectin type III domain SMAL_RS14290 PF00704 Glycosyl hydrolases family 18 SMAL_RS14300 PF01138 3' exoribonuclease family, domain 1 SMAL_RS14300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SMAL_RS14300 PF00013 KH domain SMAL_RS14300 PF03725 3' exoribonuclease family, domain 2 SMAL_RS14300 PF00575 S1 RNA binding domain SMAL_RS14305 PF00312 Ribosomal protein S15 SMAL_RS14310 PF01509 TruB family pseudouridylate synthase (N terminal domain) SMAL_RS14310 PF16198 tRNA pseudouridylate synthase B C-terminal domain SMAL_RS14310 PF09157 Pseudouridine synthase II TruB, C-terminal SMAL_RS14315 PF02033 Ribosome-binding factor A SMAL_RS14320 PF00009 Elongation factor Tu GTP binding domain SMAL_RS14320 PF11987 Translation-initiation factor 2 SMAL_RS14320 PF08364 Bacterial translation initiation factor IF-2 associated region SMAL_RS14320 PF04760 Translation initiation factor IF-2, N-terminal region SMAL_RS14325 PF13184 NusA-like KH domain SMAL_RS14325 PF08529 NusA N-terminal domain SMAL_RS14325 PF00575 S1 RNA binding domain SMAL_RS14330 PF17384 RimP C-terminal SH3 domain SMAL_RS14330 PF02576 RimP N-terminal domain SMAL_RS14345 PF00361 Proton-conducting membrane transporter SMAL_RS14350 PF00361 Proton-conducting membrane transporter SMAL_RS14350 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SMAL_RS14355 PF00361 Proton-conducting membrane transporter SMAL_RS14355 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SMAL_RS14360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SMAL_RS14365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SMAL_RS14370 PF12838 4Fe-4S dicluster domain SMAL_RS14375 PF00146 NADH dehydrogenase SMAL_RS14380 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal SMAL_RS14380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SMAL_RS14380 PF00384 Molybdopterin oxidoreductase SMAL_RS14385 PF10531 SLBB domain SMAL_RS14385 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SMAL_RS14385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SMAL_RS14395 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SMAL_RS14400 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SMAL_RS14405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SMAL_RS14410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SMAL_RS14425 PF00121 Triosephosphate isomerase SMAL_RS14435 PF00884 Sulfatase SMAL_RS14435 PF11893 Domain of unknown function (DUF3413) SMAL_RS14440 PF00534 Glycosyl transferases group 1 SMAL_RS14440 PF13439 Glycosyltransferase Family 4 SMAL_RS14445 PF01522 Polysaccharide deacetylase SMAL_RS14450 PF16363 GDP-mannose 4,6 dehydratase SMAL_RS14455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMAL_RS14455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMAL_RS14455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMAL_RS14455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMAL_RS14460 PF17848 Acetyl-coA carboxylase zinc finger domain SMAL_RS14460 PF01039 Carboxyl transferase domain SMAL_RS14465 PF00290 Tryptophan synthase alpha chain SMAL_RS14475 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS14480 PF03466 LysR substrate binding domain SMAL_RS14485 PF05816 Toxic anion resistance protein (TelA) SMAL_RS14495 PF05491 RuvB C-terminal winged helix domain SMAL_RS14495 PF17864 RuvB AAA lid domain SMAL_RS14495 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMAL_RS14510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SMAL_RS14515 PF01416 tRNA pseudouridine synthase SMAL_RS14530 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMAL_RS14530 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMAL_RS14535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMAL_RS14535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMAL_RS14540 PF01264 Chorismate synthase SMAL_RS14545 PF05175 Methyltransferase small domain SMAL_RS14550 PF02630 SCO1/SenC SMAL_RS14555 PF02666 Phosphatidylserine decarboxylase SMAL_RS14570 PF05872 Bacterial protein of unknown function (DUF853) SMAL_RS14575 PF03449 Transcription elongation factor, N-terminal SMAL_RS14575 PF01272 Transcription elongation factor, GreA/GreB, C-term SMAL_RS14585 PF00919 Uncharacterized protein family UPF0004 SMAL_RS14585 PF18693 TRAM domain SMAL_RS14585 PF04055 Radical SAM superfamily SMAL_RS14590 PF01738 Dienelactone hydrolase family SMAL_RS14605 PF00692 dUTPase SMAL_RS14610 PF10609 NUBPL iron-transfer P-loop NTPase SMAL_RS14615 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS14615 PF00593 TonB dependent receptor SMAL_RS14620 PF00593 TonB dependent receptor SMAL_RS14620 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS14630 PF05649 Peptidase family M13 SMAL_RS14630 PF01431 Peptidase family M13 SMAL_RS14665 PF00892 EamA-like transporter family SMAL_RS14670 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS14670 PF01548 Transposase SMAL_RS14675 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS14675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMAL_RS14680 PF04235 Protein of unknown function (DUF418) SMAL_RS14685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMAL_RS14690 PF00877 NlpC/P60 family SMAL_RS14695 PF00877 NlpC/P60 family SMAL_RS14700 PF00375 Sodium:dicarboxylate symporter family SMAL_RS14715 PF01171 PP-loop family SMAL_RS14715 PF11734 TilS substrate C-terminal domain SMAL_RS14715 PF09179 TilS substrate binding domain SMAL_RS14720 PF02609 Exonuclease VII small subunit SMAL_RS14725 PF00348 Polyprenyl synthetase SMAL_RS14735 PF01523 Putative modulator of DNA gyrase SMAL_RS14740 PF04751 Protein of unknown function (DUF615) SMAL_RS14745 PF01523 Putative modulator of DNA gyrase SMAL_RS14755 PF10150 Ribonuclease E/G family SMAL_RS14755 PF00575 S1 RNA binding domain SMAL_RS14760 PF02545 Maf-like protein SMAL_RS14765 PF04402 Protein of unknown function (DUF541) SMAL_RS14770 PF03544 Gram-negative bacterial TonB protein C-terminal SMAL_RS14775 PF00593 TonB dependent receptor SMAL_RS14775 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS14780 PF13520 Amino acid permease SMAL_RS14785 PF07859 alpha/beta hydrolase fold SMAL_RS14785 PF13472 GDSL-like Lipase/Acylhydrolase family SMAL_RS14795 PF02590 Predicted SPOUT methyltransferase SMAL_RS14805 PF01467 Cytidylyltransferase-like SMAL_RS14820 PF00133 tRNA synthetases class I (I, L, M and V) SMAL_RS14820 PF13603 Leucyl-tRNA synthetase, Domain 2 SMAL_RS14820 PF08264 Anticodon-binding domain of tRNA SMAL_RS14830 PF00085 Thioredoxin SMAL_RS14840 PF01590 GAF domain SMAL_RS14840 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS14840 PF00360 Phytochrome region SMAL_RS14840 PF00563 EAL domain SMAL_RS14865 PF02592 Putative vitamin uptake transporter SMAL_RS14875 PF00144 Beta-lactamase SMAL_RS14880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMAL_RS14890 PF09334 tRNA synthetases class I (M) SMAL_RS14890 PF01588 Putative tRNA binding domain SMAL_RS14900 PF04060 Putative Fe-S cluster SMAL_RS14905 PF01042 Endoribonuclease L-PSP SMAL_RS14910 PF03706 Lysylphosphatidylglycerol synthase TM region SMAL_RS14910 PF09924 Uncharacterised conserved protein (DUF2156) SMAL_RS14940 PF03831 PhnA domain SMAL_RS14940 PF08274 PhnA Zinc-Ribbon SMAL_RS14970 PF08281 Sigma-70, region 4 SMAL_RS14970 PF04542 Sigma-70 region 2 SMAL_RS14985 PF13333 Integrase core domain SMAL_RS14985 PF13276 HTH-like domain SMAL_RS14985 PF00665 Integrase core domain SMAL_RS14995 PF01258 Prokaryotic dksA/traR C4-type zinc finger SMAL_RS15000 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SMAL_RS15005 PF01863 Protein of unknown function DUF45 SMAL_RS15015 PF13091 PLD-like domain SMAL_RS15025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMAL_RS15025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMAL_RS15030 PF03797 Autotransporter beta-domain SMAL_RS15030 PF00082 Subtilase family SMAL_RS15035 PF00108 Thiolase, N-terminal domain SMAL_RS15035 PF02803 Thiolase, C-terminal domain SMAL_RS15050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS15050 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS15050 PF18158 Adaptive response protein AidB N-terminal domain SMAL_RS15060 PF01068 ATP dependent DNA ligase domain SMAL_RS15060 PF04675 DNA ligase N terminus SMAL_RS15060 PF04679 ATP dependent DNA ligase C terminal region SMAL_RS15065 PF00271 Helicase conserved C-terminal domain SMAL_RS15065 PF08494 DEAD/H associated SMAL_RS15065 PF00270 DEAD/DEAH box helicase SMAL_RS15080 PF01494 FAD binding domain SMAL_RS15085 PF00313 'Cold-shock' DNA-binding domain SMAL_RS15090 PF01048 Phosphorylase superfamily SMAL_RS15095 PF00156 Phosphoribosyl transferase domain SMAL_RS15100 PF00933 Glycosyl hydrolase family 3 N terminal domain SMAL_RS15105 PF01323 DSBA-like thioredoxin domain SMAL_RS15110 PF01928 CYTH domain SMAL_RS15115 PF05958 tRNA (Uracil-5-)-methyltransferase SMAL_RS15120 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS15120 PF00072 Response regulator receiver domain SMAL_RS15125 PF11967 Recombination protein O N terminal SMAL_RS15125 PF02565 Recombination protein O C terminal SMAL_RS15130 PF07650 KH domain SMAL_RS15130 PF01926 50S ribosome-binding GTPase SMAL_RS15135 PF14622 Ribonuclease-III-like SMAL_RS15135 PF00035 Double-stranded RNA binding motif SMAL_RS15145 PF10502 Signal peptidase, peptidase S26 SMAL_RS15150 PF00679 Elongation factor G C-terminus SMAL_RS15150 PF03144 Elongation factor Tu domain 2 SMAL_RS15150 PF06421 GTP-binding protein LepA C-terminus SMAL_RS15150 PF00009 Elongation factor Tu GTP binding domain SMAL_RS15155 PF13180 PDZ domain SMAL_RS15165 PF04542 Sigma-70 region 2 SMAL_RS15165 PF08281 Sigma-70, region 4 SMAL_RS15170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMAL_RS15170 PF00378 Enoyl-CoA hydratase/isomerase SMAL_RS15170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMAL_RS15175 PF02678 Pirin SMAL_RS15175 PF05726 Pirin C-terminal cupin domain SMAL_RS15180 PF00230 Major intrinsic protein SMAL_RS15190 PF02678 Pirin SMAL_RS15190 PF05726 Pirin C-terminal cupin domain SMAL_RS15195 PF02554 Carbon starvation protein CstA SMAL_RS15195 PF13722 5TM C-terminal transporter carbon starvation CstA SMAL_RS15200 PF04328 Selenoprotein, putative SMAL_RS15215 PF00672 HAMP domain SMAL_RS15215 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS15215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS15220 PF00072 Response regulator receiver domain SMAL_RS15220 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS15235 PF00884 Sulfatase SMAL_RS15235 PF08019 Phosphoethanolamine transferase EptA/EptB SMAL_RS15255 PF07690 Major Facilitator Superfamily SMAL_RS15260 PF02347 Glycine cleavage system P-protein SMAL_RS15270 PF00324 Amino acid permease SMAL_RS15275 PF02311 AraC-like ligand binding domain SMAL_RS15275 PF12833 Helix-turn-helix domain SMAL_RS15295 PF02203 Tar ligand binding domain homologue SMAL_RS15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS15295 PF00672 HAMP domain SMAL_RS15300 PF07728 AAA domain (dynein-related subfamily) SMAL_RS15310 PF01476 LysM domain SMAL_RS15310 PF03734 L,D-transpeptidase catalytic domain SMAL_RS15315 PF01551 Peptidase family M23 SMAL_RS15315 PF04225 Opacity-associated protein A LysM-like domain SMAL_RS15325 PF00709 Adenylosuccinate synthetase SMAL_RS15335 PF01145 SPFH domain / Band 7 family SMAL_RS15340 PF01145 SPFH domain / Band 7 family SMAL_RS15340 PF12221 Bacterial membrane protein N terminal SMAL_RS15345 PF00107 Zinc-binding dehydrogenase SMAL_RS15345 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS15350 PF00072 Response regulator receiver domain SMAL_RS15355 PF00226 DnaJ domain SMAL_RS15355 PF01556 DnaJ C terminal domain SMAL_RS15360 PF00462 Glutaredoxin SMAL_RS15360 PF08534 Redoxin SMAL_RS15370 PF00905 Penicillin binding protein transpeptidase domain SMAL_RS15370 PF06832 Penicillin-Binding Protein C-terminus Family SMAL_RS15370 PF00912 Transglycosylase SMAL_RS15375 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain SMAL_RS15375 PF00207 Alpha-2-macroglobulin family SMAL_RS15375 PF11974 Bacterial alpha-2-macroglobulin MG3 domain SMAL_RS15375 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain SMAL_RS15375 PF17962 Bacterial macroglobulin domain 6 SMAL_RS15375 PF01835 MG2 domain SMAL_RS15375 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain SMAL_RS15375 PF07703 Alpha-2-macroglobulin bait region domain SMAL_RS15380 PF03972 MmgE/PrpD family SMAL_RS15385 PF04303 PrpF protein SMAL_RS15395 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH SMAL_RS15400 PF00694 Aconitase C-terminal domain SMAL_RS15400 PF00330 Aconitase family (aconitate hydratase) SMAL_RS15405 PF00285 Citrate synthase, C-terminal domain SMAL_RS15415 PF02954 Bacterial regulatory protein, Fis family SMAL_RS15415 PF06506 Propionate catabolism activator SMAL_RS15415 PF00158 Sigma-54 interaction domain SMAL_RS15425 PF01243 Pyridoxamine 5'-phosphate oxidase SMAL_RS15425 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SMAL_RS15440 PF01202 Shikimate kinase SMAL_RS15445 PF01761 3-dehydroquinate synthase SMAL_RS15455 PF01208 Uroporphyrinogen decarboxylase (URO-D) SMAL_RS15460 PF07690 Major Facilitator Superfamily SMAL_RS15465 PF01627 Hpt domain SMAL_RS15465 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS15465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS15465 PF00672 HAMP domain SMAL_RS15465 PF00072 Response regulator receiver domain SMAL_RS15465 PF17149 Periplasmic sensor domain found in signal transduction proteins SMAL_RS15470 PF17149 Periplasmic sensor domain found in signal transduction proteins SMAL_RS15470 PF01627 Hpt domain SMAL_RS15470 PF00672 HAMP domain SMAL_RS15470 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS15470 PF00072 Response regulator receiver domain SMAL_RS15480 PF01292 Prokaryotic cytochrome b561 SMAL_RS15495 PF03313 Serine dehydratase alpha chain SMAL_RS15495 PF03315 Serine dehydratase beta chain SMAL_RS15500 PF12697 Alpha/beta hydrolase family SMAL_RS15505 PF00742 Homoserine dehydrogenase SMAL_RS15505 PF00696 Amino acid kinase family SMAL_RS15505 PF03447 Homoserine dehydrogenase, NAD binding domain SMAL_RS15510 PF01053 Cys/Met metabolism PLP-dependent enzyme SMAL_RS15515 PF00561 alpha/beta hydrolase fold SMAL_RS15520 PF08525 Opacity-associated protein A N-terminal motif SMAL_RS15520 PF01551 Peptidase family M23 SMAL_RS15520 PF01476 LysM domain SMAL_RS15525 PF00009 Elongation factor Tu GTP binding domain SMAL_RS15525 PF16658 Class II release factor RF3, C-terminal domain SMAL_RS15530 PF03006 Haemolysin-III related SMAL_RS15535 PF05170 AsmA family SMAL_RS15545 PF00535 Glycosyl transferase family 2 SMAL_RS15550 PF00912 Transglycosylase SMAL_RS15555 PF01430 Hsp33 protein SMAL_RS15565 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS15565 PF00593 TonB dependent receptor SMAL_RS15570 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS15580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMAL_RS15580 PF02770 Acyl-CoA dehydrogenase, middle domain SMAL_RS15580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMAL_RS15580 PF09317 Domain of unknown function (DUF1974) SMAL_RS15610 PF03466 LysR substrate binding domain SMAL_RS15610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS15620 PF01597 Glycine cleavage H-protein SMAL_RS15625 PF01571 Aminomethyltransferase folate-binding domain SMAL_RS15625 PF08669 Glycine cleavage T-protein C-terminal barrel domain SMAL_RS15635 PF16200 C-terminal region of band_7 SMAL_RS15635 PF01145 SPFH domain / Band 7 family SMAL_RS15645 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SMAL_RS15650 PF03819 MazG nucleotide pyrophosphohydrolase domain SMAL_RS15655 PF00459 Inositol monophosphatase family SMAL_RS15660 PF00293 NUDIX domain SMAL_RS15665 PF00202 Aminotransferase class-III SMAL_RS15670 PF04452 RNA methyltransferase SMAL_RS15685 PF00072 Response regulator receiver domain SMAL_RS15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS15685 PF02895 Signal transducing histidine kinase, homodimeric domain SMAL_RS15685 PF01584 CheW-like domain SMAL_RS15685 PF01627 Hpt domain SMAL_RS15690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS15690 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SMAL_RS15695 PF01584 CheW-like domain SMAL_RS15700 PF00072 Response regulator receiver domain SMAL_RS15705 PF00072 Response regulator receiver domain SMAL_RS15710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SMAL_RS15710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SMAL_RS15720 PF00814 Glycoprotease family SMAL_RS15725 PF13307 Helicase C-terminal domain SMAL_RS15725 PF04851 Type III restriction enzyme, res subunit SMAL_RS15735 PF14814 Bifunctional transglycosylase second domain SMAL_RS15735 PF00905 Penicillin binding protein transpeptidase domain SMAL_RS15735 PF00912 Transglycosylase SMAL_RS15740 PF00535 Glycosyl transferase family 2 SMAL_RS15755 PF02824 TGS domain SMAL_RS15755 PF04607 Region found in RelA / SpoT proteins SMAL_RS15755 PF13291 ACT domain SMAL_RS15765 PF00270 DEAD/DEAH box helicase SMAL_RS15765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SMAL_RS15765 PF04408 Helicase associated domain (HA2) SMAL_RS15765 PF11898 Domain of unknown function (DUF3418) SMAL_RS15765 PF00271 Helicase conserved C-terminal domain SMAL_RS15770 PF00210 Ferritin-like domain SMAL_RS15775 PF16124 RecQ zinc-binding SMAL_RS15775 PF09382 RQC domain SMAL_RS15775 PF00570 HRDC domain SMAL_RS15775 PF00271 Helicase conserved C-terminal domain SMAL_RS15775 PF00270 DEAD/DEAH box helicase SMAL_RS15785 PF07731 Multicopper oxidase SMAL_RS15785 PF07732 Multicopper oxidase SMAL_RS15785 PF00394 Multicopper oxidase SMAL_RS15790 PF05275 Copper resistance protein B precursor (CopB) SMAL_RS15840 PF06508 Queuosine biosynthesis protein QueC SMAL_RS15845 PF04055 Radical SAM superfamily SMAL_RS15855 PF00691 OmpA family SMAL_RS15860 PF04052 TolB amino-terminal domain SMAL_RS15860 PF07676 WD40-like Beta Propeller Repeat SMAL_RS15870 PF02472 Biopolymer transport protein ExbD/TolR SMAL_RS15875 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS15880 PF03061 Thioesterase superfamily SMAL_RS15885 PF17864 RuvB AAA lid domain SMAL_RS15885 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMAL_RS15885 PF05491 RuvB C-terminal winged helix domain SMAL_RS15890 PF02705 K+ potassium transporter SMAL_RS15895 PF07499 RuvA, C-terminal domain SMAL_RS15895 PF01330 RuvA N terminal domain SMAL_RS15900 PF02075 Crossover junction endodeoxyribonuclease RuvC SMAL_RS15905 PF01709 Transcriptional regulator SMAL_RS15925 PF01336 OB-fold nucleic acid binding domain SMAL_RS15925 PF02938 GAD domain SMAL_RS15925 PF00152 tRNA synthetases class II (D, K and N) SMAL_RS15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS15950 PF03466 LysR substrate binding domain SMAL_RS15955 PF12848 ABC transporter SMAL_RS15955 PF00005 ABC transporter SMAL_RS15960 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS15960 PF00593 TonB dependent receptor SMAL_RS15965 PF02254 TrkA-N domain SMAL_RS15965 PF00999 Sodium/hydrogen exchanger family SMAL_RS15970 PF01053 Cys/Met metabolism PLP-dependent enzyme SMAL_RS15975 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS15975 PF00072 Response regulator receiver domain SMAL_RS15980 PF16527 Two-component sensor protein CpxA, periplasmic domain SMAL_RS15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS15980 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS15980 PF00672 HAMP domain SMAL_RS15990 PF10431 C-terminal, D2-small domain, of ClpB protein SMAL_RS15990 PF17871 AAA lid domain SMAL_RS15990 PF07724 AAA domain (Cdc48 subfamily) SMAL_RS15990 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS15990 PF02861 Clp amino terminal domain, pathogenicity island component SMAL_RS16010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMAL_RS16010 PF00205 Thiamine pyrophosphate enzyme, central domain SMAL_RS16010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMAL_RS16025 PF00593 TonB dependent receptor SMAL_RS16025 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS16030 PF02358 Trehalose-phosphatase SMAL_RS16035 PF00723 Glycosyl hydrolases family 15 SMAL_RS16040 PF00982 Glycosyltransferase family 20 SMAL_RS16045 PF04134 Protein of unknown function, DUF393 SMAL_RS16055 PF02578 Multi-copper polyphenol oxidoreductase laccase SMAL_RS16060 PF00849 RNA pseudouridylate synthase SMAL_RS16065 PF13525 Outer membrane lipoprotein SMAL_RS16075 PF00795 Carbon-nitrogen hydrolase SMAL_RS16075 PF02540 NAD synthase SMAL_RS16080 PF02629 CoA binding domain SMAL_RS16080 PF00549 CoA-ligase SMAL_RS16085 PF00549 CoA-ligase SMAL_RS16085 PF08442 ATP-grasp domain SMAL_RS16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS16090 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS16095 PF02954 Bacterial regulatory protein, Fis family SMAL_RS16095 PF00158 Sigma-54 interaction domain SMAL_RS16095 PF00072 Response regulator receiver domain SMAL_RS16100 PF00437 Type II/IV secretion system protein SMAL_RS16100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SMAL_RS16105 PF00535 Glycosyl transferase family 2 SMAL_RS16110 PF13439 Glycosyltransferase Family 4 SMAL_RS16120 PF13439 Glycosyltransferase Family 4 SMAL_RS16120 PF00534 Glycosyl transferases group 1 SMAL_RS16125 PF01728 FtsJ-like methyltransferase SMAL_RS16140 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS16140 PF00114 Pilin (bacterial filament) SMAL_RS16145 PF00114 Pilin (bacterial filament) SMAL_RS16145 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS16150 PF00482 Type II secretion system (T2SS), protein F SMAL_RS16155 PF01478 Type IV leader peptidase family SMAL_RS16155 PF06750 Bacterial Peptidase A24 N-terminal domain SMAL_RS16160 PF01121 Dephospho-CoA kinase SMAL_RS16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS16165 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS16165 PF00672 HAMP domain SMAL_RS16170 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS16170 PF00072 Response regulator receiver domain SMAL_RS16185 PF18030 RimK PreATP-grasp domain SMAL_RS16185 PF08443 RimK-like ATP-grasp domain SMAL_RS16200 PF05656 Protein of unknown function (DUF805) SMAL_RS16210 PF00657 GDSL-like Lipase/Acylhydrolase SMAL_RS16210 PF03797 Autotransporter beta-domain SMAL_RS16220 PF05690 Thiazole biosynthesis protein ThiG SMAL_RS16225 PF02390 Putative methyltransferase SMAL_RS16230 PF02080 TrkA-C domain SMAL_RS16230 PF03600 Citrate transporter SMAL_RS16245 PF01557 Fumarylacetoacetate (FAA) hydrolase family SMAL_RS16250 PF01741 Large-conductance mechanosensitive channel, MscL SMAL_RS16260 PF01235 Sodium:alanine symporter family SMAL_RS16270 PF00588 SpoU rRNA Methylase family SMAL_RS16270 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMAL_RS16275 PF01235 Sodium:alanine symporter family SMAL_RS16280 PF13302 Acetyltransferase (GNAT) domain SMAL_RS16285 PF00873 AcrB/AcrD/AcrF family SMAL_RS16290 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS16290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS16310 PF13276 HTH-like domain SMAL_RS16310 PF13333 Integrase core domain SMAL_RS16310 PF00665 Integrase core domain SMAL_RS16315 PF03466 LysR substrate binding domain SMAL_RS16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS16320 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS16325 PF01661 Macro domain SMAL_RS16335 PF00274 Fructose-bisphosphate aldolase class-I SMAL_RS16340 PF02887 Pyruvate kinase, alpha/beta domain SMAL_RS16340 PF00224 Pyruvate kinase, barrel domain SMAL_RS16345 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS16350 PF00162 Phosphoglycerate kinase SMAL_RS16365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SMAL_RS16365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SMAL_RS16370 PF03922 OmpW family SMAL_RS16380 PF00753 Metallo-beta-lactamase superfamily SMAL_RS16395 PF03965 Penicillinase repressor SMAL_RS16410 PF00456 Transketolase, thiamine diphosphate binding domain SMAL_RS16410 PF02780 Transketolase, C-terminal domain SMAL_RS16410 PF02779 Transketolase, pyrimidine binding domain SMAL_RS16415 PF00375 Sodium:dicarboxylate symporter family SMAL_RS16425 PF07584 Aerotolerance regulator N-terminal SMAL_RS16425 PF00092 von Willebrand factor type A domain SMAL_RS16445 PF07726 ATPase family associated with various cellular activities (AAA) SMAL_RS16445 PF17863 AAA lid domain SMAL_RS16450 PF00263 Bacterial type II and III secretion system protein SMAL_RS16450 PF07660 Secretin and TonB N terminus short domain SMAL_RS16450 PF11741 AMIN domain SMAL_RS16450 PF03958 Bacterial type II/III secretion system short domain SMAL_RS16455 PF04351 Pilus assembly protein, PilP SMAL_RS16460 PF04350 Pilus assembly protein, PilO SMAL_RS16470 PF11104 Type IV pilus assembly protein PilM; SMAL_RS16475 PF00912 Transglycosylase SMAL_RS16475 PF00905 Penicillin binding protein transpeptidase domain SMAL_RS16475 PF17092 Penicillin-binding protein OB-like domain SMAL_RS16485 PF01548 Transposase SMAL_RS16485 PF02371 Transposase IS116/IS110/IS902 family SMAL_RS16530 PF00285 Citrate synthase, C-terminal domain SMAL_RS16535 PF01197 Ribosomal protein L31 SMAL_RS16540 PF01156 Inosine-uridine preferring nucleoside hydrolase SMAL_RS16545 PF00270 DEAD/DEAH box helicase SMAL_RS16545 PF00271 Helicase conserved C-terminal domain SMAL_RS16545 PF17191 RecG wedge domain SMAL_RS16550 PF01042 Endoribonuclease L-PSP SMAL_RS16555 PF13291 ACT domain SMAL_RS16555 PF04607 Region found in RelA / SpoT proteins SMAL_RS16555 PF02824 TGS domain SMAL_RS16560 PF01192 RNA polymerase Rpb6 SMAL_RS16565 PF00625 Guanylate kinase SMAL_RS16570 PF00384 Molybdopterin oxidoreductase SMAL_RS16570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMAL_RS16570 PF01568 Molydopterin dinucleotide binding domain SMAL_RS16575 PF01568 Molydopterin dinucleotide binding domain SMAL_RS16575 PF00384 Molybdopterin oxidoreductase SMAL_RS16575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMAL_RS16580 PF09163 Formate dehydrogenase N, transmembrane SMAL_RS16580 PF12800 4Fe-4S binding domain SMAL_RS16580 PF13247 4Fe-4S dicluster domain SMAL_RS16585 PF01292 Prokaryotic cytochrome b561 SMAL_RS16590 PF04216 Protein involved in formate dehydrogenase formation SMAL_RS16595 PF12390 Selenocysteine synthase N terminal SMAL_RS16595 PF03841 L-seryl-tRNA selenium transferase SMAL_RS16600 PF09107 Elongation factor SelB, winged helix SMAL_RS16600 PF09106 Elongation factor SelB, winged helix SMAL_RS16600 PF03144 Elongation factor Tu domain 2 SMAL_RS16600 PF00009 Elongation factor Tu GTP binding domain SMAL_RS16610 PF00586 AIR synthase related protein, N-terminal domain SMAL_RS16610 PF02769 AIR synthase related protein, C-terminal domain SMAL_RS16615 PF13784 Fic/DOC family N-terminal SMAL_RS16615 PF02661 Fic/DOC family SMAL_RS16620 PF03755 YicC-like family, N-terminal region SMAL_RS16620 PF08340 Domain of unknown function (DUF1732) SMAL_RS16625 PF03725 3' exoribonuclease family, domain 2 SMAL_RS16625 PF01138 3' exoribonuclease family, domain 1 SMAL_RS16630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMAL_RS16635 PF01725 Ham1 family SMAL_RS16640 PF06969 HemN C-terminal domain SMAL_RS16640 PF04055 Radical SAM superfamily SMAL_RS16655 PF00557 Metallopeptidase family M24 SMAL_RS16660 PF00557 Metallopeptidase family M24 SMAL_RS16660 PF05195 Aminopeptidase P, N-terminal domain SMAL_RS16665 PF03695 Uncharacterised protein family (UPF0149) SMAL_RS16675 PF05164 Cell division protein ZapA SMAL_RS16680 PF01812 5-formyltetrahydrofolate cyclo-ligase family SMAL_RS16690 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SMAL_RS16700 PF13369 Transglutaminase-like superfamily SMAL_RS16705 PF00301 Rubredoxin SMAL_RS16710 PF02581 Thiamine monophosphate synthase SMAL_RS16715 PF00202 Aminotransferase class-III SMAL_RS16720 PF00127 Copper binding proteins, plastocyanin/azurin family SMAL_RS16730 PF00202 Aminotransferase class-III SMAL_RS16735 PF00027 Cyclic nucleotide-binding domain SMAL_RS16735 PF00520 Ion transport protein SMAL_RS16740 PF12889 Protein of unknown function (DUF3829) SMAL_RS16745 PF12889 Protein of unknown function (DUF3829) SMAL_RS16770 PF01569 PAP2 superfamily SMAL_RS16780 PF01225 Mur ligase family, catalytic domain SMAL_RS16780 PF02875 Mur ligase family, glutamate ligase domain SMAL_RS16780 PF08245 Mur ligase middle domain SMAL_RS16790 PF00365 Phosphofructokinase SMAL_RS16810 PF03030 Inorganic H+ pyrophosphatase SMAL_RS16820 PF02472 Biopolymer transport protein ExbD/TolR SMAL_RS16825 PF01618 MotA/TolQ/ExbB proton channel family SMAL_RS16830 PF04304 Protein of unknown function (DUF454) SMAL_RS16835 PF01126 Heme oxygenase SMAL_RS16865 PF00719 Inorganic pyrophosphatase SMAL_RS16880 PF00593 TonB dependent receptor SMAL_RS16880 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS16885 PF12833 Helix-turn-helix domain SMAL_RS16885 PF01965 DJ-1/PfpI family SMAL_RS16890 PF00072 Response regulator receiver domain SMAL_RS16890 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS16900 PF01964 Radical SAM ThiC family SMAL_RS16900 PF13667 ThiC-associated domain SMAL_RS16905 PF02028 BCCT, betaine/carnitine/choline family transporter SMAL_RS16915 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SMAL_RS16915 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SMAL_RS16920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMAL_RS16920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMAL_RS16920 PF00205 Thiamine pyrophosphate enzyme, central domain SMAL_RS16930 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS16935 PF08502 LeuA allosteric (dimerisation) domain SMAL_RS16935 PF00682 HMGL-like SMAL_RS16945 PF00330 Aconitase family (aconitate hydratase) SMAL_RS16950 PF00694 Aconitase C-terminal domain SMAL_RS16955 PF00180 Isocitrate/isopropylmalate dehydrogenase SMAL_RS16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS16965 PF03466 LysR substrate binding domain SMAL_RS16970 PF00873 AcrB/AcrD/AcrF family SMAL_RS16975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS16990 PF02321 Outer membrane efflux protein SMAL_RS16995 PF13520 Amino acid permease SMAL_RS17000 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SMAL_RS17005 PF03279 Bacterial lipid A biosynthesis acyltransferase SMAL_RS17035 PF00390 Malic enzyme, N-terminal domain SMAL_RS17035 PF01515 Phosphate acetyl/butaryl transferase SMAL_RS17035 PF03949 Malic enzyme, NAD binding domain SMAL_RS17040 PF00375 Sodium:dicarboxylate symporter family SMAL_RS17050 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS17055 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS17055 PF00072 Response regulator receiver domain SMAL_RS17065 PF08521 Two-component sensor kinase N-terminal SMAL_RS17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS17065 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS17070 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS17070 PF00072 Response regulator receiver domain SMAL_RS17080 PF03600 Citrate transporter SMAL_RS17085 PF00106 short chain dehydrogenase SMAL_RS17105 PF03193 RsgA GTPase SMAL_RS17110 PF00155 Aminotransferase class I and II SMAL_RS17125 PF01522 Polysaccharide deacetylase SMAL_RS17130 PF00462 Glutaredoxin SMAL_RS17145 PF01979 Amidohydrolase family SMAL_RS17150 PF00449 Urease alpha-subunit, N-terminal domain SMAL_RS17150 PF01979 Amidohydrolase family SMAL_RS17155 PF01323 DSBA-like thioredoxin domain SMAL_RS17160 PF02645 Uncharacterised protein, DegV family COG1307 SMAL_RS17170 PF02321 Outer membrane efflux protein SMAL_RS17175 PF13533 Biotin-lipoyl like SMAL_RS17185 PF03466 LysR substrate binding domain SMAL_RS17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS17200 PF00563 EAL domain SMAL_RS17200 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS17200 PF00360 Phytochrome region SMAL_RS17200 PF01590 GAF domain SMAL_RS17205 PF00756 Putative esterase SMAL_RS17215 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS17215 PF00107 Zinc-binding dehydrogenase SMAL_RS17220 PF02583 Metal-sensitive transcriptional repressor SMAL_RS17230 PF03466 LysR substrate binding domain SMAL_RS17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS17235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMAL_RS17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS17255 PF03466 LysR substrate binding domain SMAL_RS17260 PF00107 Zinc-binding dehydrogenase SMAL_RS17260 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS17270 PF04107 Glutamate-cysteine ligase family 2(GCS2) SMAL_RS17280 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SMAL_RS17280 PF12833 Helix-turn-helix domain SMAL_RS17285 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SMAL_RS17285 PF00753 Metallo-beta-lactamase superfamily SMAL_RS17285 PF10996 Beta-Casp domain SMAL_RS17290 PF01926 50S ribosome-binding GTPase SMAL_RS17295 PF00034 Cytochrome c SMAL_RS17300 PF01323 DSBA-like thioredoxin domain SMAL_RS17305 PF01323 DSBA-like thioredoxin domain SMAL_RS17315 PF00892 EamA-like transporter family SMAL_RS17320 PF01037 Lrp/AsnC ligand binding domain SMAL_RS17330 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS17330 PF00593 TonB dependent receptor SMAL_RS17335 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS17335 PF00593 TonB dependent receptor SMAL_RS17340 PF02472 Biopolymer transport protein ExbD/TolR SMAL_RS17345 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SMAL_RS17345 PF01464 Transglycosylase SLT domain SMAL_RS17355 PF01743 Poly A polymerase head domain SMAL_RS17355 PF01966 HD domain SMAL_RS17355 PF12627 Probable RNA and SrmB- binding site of polymerase A SMAL_RS17375 PF03797 Autotransporter beta-domain SMAL_RS17375 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS17375 PF16168 Adhesin of bacterial autotransporter system, probable stalk SMAL_RS17385 PF01979 Amidohydrolase family SMAL_RS17390 PF01380 SIS domain SMAL_RS17395 PF00356 Bacterial regulatory proteins, lacI family SMAL_RS17400 PF07690 Major Facilitator Superfamily SMAL_RS17405 PF02685 Glucokinase SMAL_RS17415 PF00728 Glycosyl hydrolase family 20, catalytic domain SMAL_RS17415 PF07691 PA14 domain SMAL_RS17415 PF02838 Glycosyl hydrolase family 20, domain 2 SMAL_RS17435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SMAL_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS17445 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS17450 PF00072 Response regulator receiver domain SMAL_RS17455 PF00360 Phytochrome region SMAL_RS17455 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS17455 PF08446 PAS fold SMAL_RS17455 PF01590 GAF domain SMAL_RS17460 PF04972 BON domain SMAL_RS17465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMAL_RS17465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMAL_RS17470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMAL_RS17470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SMAL_RS17485 PF11818 C-terminal domain of tail specific protease (DUF3340) SMAL_RS17485 PF03572 Peptidase family S41 SMAL_RS17485 PF00595 PDZ domain SMAL_RS17485 PF17804 Tail specific protease N-terminal domain SMAL_RS17490 PF04055 Radical SAM superfamily SMAL_RS17490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SMAL_RS17495 PF03099 Biotin/lipoate A/B protein ligase family SMAL_RS17500 PF04359 Protein of unknown function (DUF493) SMAL_RS17510 PF07943 Penicillin-binding protein 5, C-terminal domain SMAL_RS17510 PF00768 D-alanyl-D-alanine carboxypeptidase SMAL_RS17515 PF05036 Sporulation related domain SMAL_RS17515 PF03330 Lytic transglycolase SMAL_RS17520 PF13406 Transglycosylase SLT domain SMAL_RS17525 PF01098 Cell cycle protein SMAL_RS17530 PF01098 Cell cycle protein SMAL_RS17535 PF00905 Penicillin binding protein transpeptidase domain SMAL_RS17535 PF03717 Penicillin-binding Protein dimerisation domain SMAL_RS17545 PF04085 rod shape-determining protein MreC SMAL_RS17555 PF00294 pfkB family carbohydrate kinase SMAL_RS17560 PF00884 Sulfatase SMAL_RS17565 PF13419 Haloacid dehalogenase-like hydrolase SMAL_RS17575 PF11838 ERAP1-like C-terminal domain SMAL_RS17575 PF01433 Peptidase family M1 domain SMAL_RS17580 PF01209 ubiE/COQ5 methyltransferase family SMAL_RS17610 PF02321 Outer membrane efflux protein SMAL_RS17615 PF00873 AcrB/AcrD/AcrF family SMAL_RS17620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS17620 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS17625 PF08361 MAATS-type transcriptional repressor, C-terminal region SMAL_RS17625 PF00440 Bacterial regulatory proteins, tetR family SMAL_RS17630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMAL_RS17630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMAL_RS17635 PF00004 ATPase family associated with various cellular activities (AAA) SMAL_RS17635 PF10431 C-terminal, D2-small domain, of ClpB protein SMAL_RS17635 PF07724 AAA domain (Cdc48 subfamily) SMAL_RS17640 PF00227 Proteasome subunit SMAL_RS17650 PF02899 Phage integrase, N-terminal SAM-like domain SMAL_RS17650 PF00589 Phage integrase family SMAL_RS17660 PF01678 Diaminopimelate epimerase SMAL_RS17670 PF04304 Protein of unknown function (DUF454) SMAL_RS17675 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SMAL_RS17675 PF00326 Prolyl oligopeptidase family SMAL_RS17680 PF00155 Aminotransferase class I and II SMAL_RS17685 PF00326 Prolyl oligopeptidase family SMAL_RS17685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SMAL_RS17700 PF00528 Binding-protein-dependent transport system inner membrane component SMAL_RS17705 PF09383 NIL domain SMAL_RS17705 PF00005 ABC transporter SMAL_RS17710 PF00892 EamA-like transporter family SMAL_RS17715 PF04461 Protein of unknown function (DUF520) SMAL_RS17725 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS17725 PF00107 Zinc-binding dehydrogenase SMAL_RS17730 PF00171 Aldehyde dehydrogenase family SMAL_RS17745 PF01432 Peptidase family M3 SMAL_RS17755 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS17760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMAL_RS17775 PF01380 SIS domain SMAL_RS17780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS17785 PF00005 ABC transporter SMAL_RS17790 PF00005 ABC transporter SMAL_RS17790 PF02687 FtsX-like permease family SMAL_RS17790 PF12704 MacB-like periplasmic core domain SMAL_RS17795 PF02687 FtsX-like permease family SMAL_RS17795 PF12704 MacB-like periplasmic core domain SMAL_RS17805 PF02954 Bacterial regulatory protein, Fis family SMAL_RS17805 PF00072 Response regulator receiver domain SMAL_RS17805 PF00158 Sigma-54 interaction domain SMAL_RS17810 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS17810 PF00989 PAS fold SMAL_RS17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS17820 PF12804 MobA-like NTP transferase domain SMAL_RS17820 PF00132 Bacterial transferase hexapeptide (six repeats) SMAL_RS17820 PF14602 Hexapeptide repeat of succinyl-transferase SMAL_RS17830 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SMAL_RS17830 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SMAL_RS17835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMAL_RS17835 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMAL_RS17840 PF00231 ATP synthase SMAL_RS17845 PF00306 ATP synthase alpha/beta chain, C terminal domain SMAL_RS17845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMAL_RS17845 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMAL_RS17850 PF00213 ATP synthase delta (OSCP) subunit SMAL_RS17855 PF00430 ATP synthase B/B' CF(0) SMAL_RS17860 PF00137 ATP synthase subunit C SMAL_RS17865 PF00119 ATP synthase A chain SMAL_RS17880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMAL_RS17880 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS17885 PF02817 e3 binding domain SMAL_RS17885 PF00364 Biotin-requiring enzyme SMAL_RS17885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMAL_RS17900 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SMAL_RS17900 PF01266 FAD dependent oxidoreductase SMAL_RS17905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SMAL_RS17905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SMAL_RS17910 PF03180 NLPA lipoprotein SMAL_RS17930 PF03900 Porphobilinogen deaminase, C-terminal domain SMAL_RS17930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SMAL_RS17935 PF04397 LytTr DNA-binding domain SMAL_RS17935 PF00072 Response regulator receiver domain SMAL_RS17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS17940 PF06580 Histidine kinase SMAL_RS17945 PF02230 Phospholipase/Carboxylesterase SMAL_RS17950 PF13632 Glycosyl transferase family group 2 SMAL_RS17955 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS17955 PF00593 TonB dependent receptor SMAL_RS17960 PF10947 Protein of unknown function (DUF2628) SMAL_RS17965 PF08447 PAS fold SMAL_RS17965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS18005 PF07690 Major Facilitator Superfamily SMAL_RS18025 PF00082 Subtilase family SMAL_RS18025 PF03797 Autotransporter beta-domain SMAL_RS18025 PF12951 Passenger-associated-transport-repeat SMAL_RS18030 PF07690 Major Facilitator Superfamily SMAL_RS18035 PF03466 LysR substrate binding domain SMAL_RS18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS18040 PF07690 Major Facilitator Superfamily SMAL_RS18050 PF00905 Penicillin binding protein transpeptidase domain SMAL_RS18050 PF03717 Penicillin-binding Protein dimerisation domain SMAL_RS18060 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS18060 PF00593 TonB dependent receptor SMAL_RS18080 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS18080 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS18095 PF07681 DoxX SMAL_RS18110 PF13175 AAA ATPase domain SMAL_RS18135 PF07804 HipA-like C-terminal domain SMAL_RS18140 PF04546 Sigma-70, non-essential region SMAL_RS18140 PF04539 Sigma-70 region 3 SMAL_RS18140 PF00140 Sigma-70 factor, region 1.2 SMAL_RS18140 PF04545 Sigma-70, region 4 SMAL_RS18140 PF04542 Sigma-70 region 2 SMAL_RS18140 PF03979 Sigma-70 factor, region 1.1 SMAL_RS18145 PF02580 D-Tyr-tRNA(Tyr) deacylase SMAL_RS18155 PF00925 GTP cyclohydrolase II SMAL_RS18175 PF00535 Glycosyl transferase family 2 SMAL_RS18180 PF00534 Glycosyl transferases group 1 SMAL_RS18180 PF13439 Glycosyltransferase Family 4 SMAL_RS18195 PF01029 NusB family SMAL_RS18195 PF01189 16S rRNA methyltransferase RsmB/F SMAL_RS18200 PF02911 Formyl transferase, C-terminal domain SMAL_RS18200 PF00551 Formyl transferase SMAL_RS18205 PF01327 Polypeptide deformylase SMAL_RS18215 PF17782 DprA winged helix domain SMAL_RS18215 PF02481 DNA recombination-mediator protein A SMAL_RS18220 PF04361 Protein of unknown function (DUF494) SMAL_RS18225 PF00114 Pilin (bacterial filament) SMAL_RS18225 PF07963 Prokaryotic N-terminal methylation motif SMAL_RS18230 PF06271 RDD family SMAL_RS18235 PF01131 DNA topoisomerase SMAL_RS18235 PF01751 Toprim domain SMAL_RS18235 PF13368 Topoisomerase C-terminal repeat SMAL_RS18240 PF01300 Telomere recombination SMAL_RS18265 PF01343 Peptidase family S49 SMAL_RS18270 PF01554 MatE SMAL_RS18285 PF00270 DEAD/DEAH box helicase SMAL_RS18285 PF00271 Helicase conserved C-terminal domain SMAL_RS18285 PF17764 3′ DNA-binding domain (3′BD) SMAL_RS18285 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SMAL_RS18285 PF18074 Primosomal protein N C-terminal domain SMAL_RS18290 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS18290 PF13417 Glutathione S-transferase, N-terminal domain SMAL_RS18300 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMAL_RS18320 PF01541 GIY-YIG catalytic domain SMAL_RS18325 PF03458 UPF0126 domain SMAL_RS18330 PF13533 Biotin-lipoyl like SMAL_RS18335 PF00873 AcrB/AcrD/AcrF family SMAL_RS18340 PF00873 AcrB/AcrD/AcrF family SMAL_RS18350 PF00793 DAHP synthetase I family SMAL_RS18370 PF01047 MarR family SMAL_RS18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS18375 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS18375 PF00672 HAMP domain SMAL_RS18380 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS18380 PF00072 Response regulator receiver domain SMAL_RS18390 PF00296 Luciferase-like monooxygenase SMAL_RS18395 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS18395 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS18400 PF03466 LysR substrate binding domain SMAL_RS18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS18410 PF00118 TCP-1/cpn60 chaperonin family SMAL_RS18415 PF00166 Chaperonin 10 Kd subunit SMAL_RS18420 PF04231 Endonuclease I SMAL_RS18425 PF03091 CutA1 divalent ion tolerance protein SMAL_RS18430 PF02683 Cytochrome C biogenesis protein transmembrane region SMAL_RS18430 PF11412 Disulphide bond corrector protein DsbC SMAL_RS18435 PF08534 Redoxin SMAL_RS18440 PF00667 FAD binding domain SMAL_RS18440 PF00258 Flavodoxin SMAL_RS18440 PF00175 Oxidoreductase NAD-binding domain SMAL_RS18445 PF02203 Tar ligand binding domain homologue SMAL_RS18445 PF00672 HAMP domain SMAL_RS18445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS18450 PF00797 N-acetyltransferase SMAL_RS18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS18465 PF03466 LysR substrate binding domain SMAL_RS18475 PF00245 Alkaline phosphatase SMAL_RS18485 PF00768 D-alanyl-D-alanine carboxypeptidase SMAL_RS18485 PF07943 Penicillin-binding protein 5, C-terminal domain SMAL_RS18495 PF02525 Flavodoxin-like fold SMAL_RS18515 PF01220 Dehydroquinase class II SMAL_RS18525 PF00364 Biotin-requiring enzyme SMAL_RS18530 PF00289 Biotin carboxylase, N-terminal domain SMAL_RS18530 PF02785 Biotin carboxylase C-terminal domain SMAL_RS18530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMAL_RS18555 PF02954 Bacterial regulatory protein, Fis family SMAL_RS18575 PF00782 Dual specificity phosphatase, catalytic domain SMAL_RS18580 PF12147 Putative methyltransferase SMAL_RS18580 PF12146 Serine aminopeptidase, S33 SMAL_RS18585 PF01066 CDP-alcohol phosphatidyltransferase SMAL_RS18595 PF01808 AICARFT/IMPCHase bienzyme SMAL_RS18595 PF02142 MGS-like domain SMAL_RS18610 PF02844 Phosphoribosylglycinamide synthetase, N domain SMAL_RS18610 PF02843 Phosphoribosylglycinamide synthetase, C domain SMAL_RS18610 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMAL_RS18615 PF00140 Sigma-70 factor, region 1.2 SMAL_RS18615 PF04545 Sigma-70, region 4 SMAL_RS18615 PF04542 Sigma-70 region 2 SMAL_RS18620 PF03965 Penicillinase repressor SMAL_RS18630 PF07930 D-aminopeptidase, domain B SMAL_RS18630 PF00144 Beta-lactamase SMAL_RS18635 PF03167 Uracil DNA glycosylase superfamily SMAL_RS18640 PF00072 Response regulator receiver domain SMAL_RS18640 PF01339 CheB methylesterase SMAL_RS18645 PF18075 FtsX extracellular domain SMAL_RS18650 PF00005 ABC transporter SMAL_RS18655 PF00270 DEAD/DEAH box helicase SMAL_RS18655 PF00271 Helicase conserved C-terminal domain SMAL_RS18655 PF12300 ATP-dependent RNA helicase RhlB SMAL_RS18660 PF00085 Thioredoxin SMAL_RS18665 PF07497 Rho termination factor, RNA-binding domain SMAL_RS18665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMAL_RS18665 PF07498 Rho termination factor, N-terminal domain SMAL_RS18670 PF07694 5TMR of 5TMR-LYT SMAL_RS18670 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS18680 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SMAL_RS18705 PF03971 Monomeric isocitrate dehydrogenase SMAL_RS18715 PF04972 BON domain SMAL_RS18715 PF01476 LysM domain SMAL_RS18720 PF14489 QueF-like protein SMAL_RS18720 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SMAL_RS18725 PF07687 Peptidase dimerisation domain SMAL_RS18725 PF01546 Peptidase family M20/M25/M40 SMAL_RS18730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS18735 PF00873 AcrB/AcrD/AcrF family SMAL_RS18740 PF00873 AcrB/AcrD/AcrF family SMAL_RS18745 PF00593 TonB dependent receptor SMAL_RS18745 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS18750 PF12805 FUSC-like inner membrane protein yccS SMAL_RS18755 PF00106 short chain dehydrogenase SMAL_RS18760 PF07690 Major Facilitator Superfamily SMAL_RS18785 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SMAL_RS18785 PF09297 NADH pyrophosphatase zinc ribbon domain SMAL_RS18785 PF00293 NUDIX domain SMAL_RS18790 PF01521 Iron-sulphur cluster biosynthesis SMAL_RS18810 PF00072 Response regulator receiver domain SMAL_RS18810 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS18810 PF00563 EAL domain SMAL_RS18815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SMAL_RS18815 PF00072 Response regulator receiver domain SMAL_RS18815 PF00672 HAMP domain SMAL_RS18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS18815 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS18815 PF01627 Hpt domain SMAL_RS18820 PF00210 Ferritin-like domain SMAL_RS18830 PF00293 NUDIX domain SMAL_RS18845 PF00380 Ribosomal protein S9/S16 SMAL_RS18850 PF00572 Ribosomal protein L13 SMAL_RS18855 PF03232 Ubiquinone biosynthesis protein COQ7 SMAL_RS18860 PF00893 Small Multidrug Resistance protein SMAL_RS18865 PF02675 S-adenosylmethionine decarboxylase SMAL_RS18870 PF00325 Bacterial regulatory proteins, crp family SMAL_RS18870 PF00027 Cyclic nucleotide-binding domain SMAL_RS18875 PF01925 Sulfite exporter TauE/SafE SMAL_RS18885 PF00218 Indole-3-glycerol phosphate synthase SMAL_RS18890 PF02885 Glycosyl transferase family, helical bundle domain SMAL_RS18890 PF00591 Glycosyl transferase family, a/b domain SMAL_RS18895 PF00117 Glutamine amidotransferase class-I SMAL_RS18905 PF00425 chorismate binding enzyme SMAL_RS18905 PF04715 Anthranilate synthase component I, N terminal region SMAL_RS18910 PF00781 Diacylglycerol kinase catalytic domain SMAL_RS18920 PF00834 Ribulose-phosphate 3 epimerase family SMAL_RS18925 PF05099 Tellurite resistance protein TerB SMAL_RS18925 PF00226 DnaJ domain SMAL_RS18930 PF01259 SAICAR synthetase SMAL_RS18940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SMAL_RS18940 PF00361 Proton-conducting membrane transporter SMAL_RS18940 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SMAL_RS18940 PF13244 Domain of unknown function (DUF4040) SMAL_RS18945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SMAL_RS18950 PF00361 Proton-conducting membrane transporter SMAL_RS18955 PF01899 Na+/H+ ion antiporter subunit SMAL_RS18960 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SMAL_RS18965 PF03334 Na+/H+ antiporter subunit SMAL_RS18970 PF01699 Sodium/calcium exchanger protein SMAL_RS18985 PF04209 homogentisate 1,2-dioxygenase SMAL_RS18990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMAL_RS18995 PF01047 MarR family SMAL_RS19000 PF06250 YhcG PDDEXK nuclease domain SMAL_RS19000 PF17761 DUF1016 N-terminal domain SMAL_RS19015 PF00854 POT family SMAL_RS19020 PF03301 Tryptophan 2,3-dioxygenase SMAL_RS19025 PF00676 Dehydrogenase E1 component SMAL_RS19030 PF02779 Transketolase, pyrimidine binding domain SMAL_RS19030 PF02780 Transketolase, C-terminal domain SMAL_RS19040 PF00364 Biotin-requiring enzyme SMAL_RS19040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMAL_RS19040 PF02817 e3 binding domain SMAL_RS19055 PF08279 HTH domain SMAL_RS19055 PF13280 WYL domain SMAL_RS19065 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS19070 PF05661 Protein of unknown function (DUF808) SMAL_RS19075 PF03109 ABC1 family SMAL_RS19080 PF00884 Sulfatase SMAL_RS19085 PF12794 Mechanosensitive ion channel inner membrane domain 1 SMAL_RS19085 PF12795 Mechanosensitive ion channel porin domain SMAL_RS19085 PF00924 Mechanosensitive ion channel SMAL_RS19100 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SMAL_RS19100 PF01266 FAD dependent oxidoreductase SMAL_RS19120 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS19120 PF00072 Response regulator receiver domain SMAL_RS19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS19135 PF17810 Arginine decarboxylase helical bundle domain SMAL_RS19135 PF17944 Arginine decarboxylase C-terminal helical extension SMAL_RS19135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMAL_RS19140 PF17284 Spermidine synthase tetramerisation domain SMAL_RS19155 PF00543 Nitrogen regulatory protein P-II SMAL_RS19160 PF04380 Membrane fusogenic activity SMAL_RS19205 PF01078 Magnesium chelatase, subunit ChlI SMAL_RS19205 PF13335 Magnesium chelatase, subunit ChlI C-terminal SMAL_RS19225 PF06055 Exopolysaccharide synthesis, ExoD SMAL_RS19230 PF07995 Glucose / Sorbosone dehydrogenase SMAL_RS19240 PF01483 Proprotein convertase P-domain SMAL_RS19240 PF00082 Subtilase family SMAL_RS19250 PF02630 SCO1/SenC SMAL_RS19255 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SMAL_RS19260 PF00510 Cytochrome c oxidase subunit III SMAL_RS19265 PF00115 Cytochrome C and Quinol oxidase polypeptide I SMAL_RS19270 PF06481 COX Aromatic Rich Motif SMAL_RS19270 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SMAL_RS19275 PF00155 Aminotransferase class I and II SMAL_RS19275 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS19290 PF00155 Aminotransferase class I and II SMAL_RS19290 PF00392 Bacterial regulatory proteins, gntR family SMAL_RS19295 PF00266 Aminotransferase class-V SMAL_RS19325 PF02667 Short chain fatty acid transporter SMAL_RS19330 PF01040 UbiA prenyltransferase family SMAL_RS19355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMAL_RS19360 PF00593 TonB dependent receptor SMAL_RS19360 PF07715 TonB-dependent Receptor Plug Domain SMAL_RS19365 PF16338 Domain of unknown function (DUF4968) SMAL_RS19365 PF01055 Glycosyl hydrolases family 31 SMAL_RS19365 PF17137 Domain of unknown function (DUF5110) SMAL_RS19370 PF01380 SIS domain SMAL_RS19375 PF00480 ROK family SMAL_RS19380 PF08013 Tagatose 6 phosphate kinase SMAL_RS19385 PF00455 DeoR C terminal sensor domain SMAL_RS19385 PF08220 DeoR-like helix-turn-helix domain SMAL_RS19390 PF01979 Amidohydrolase family SMAL_RS19395 PF00083 Sugar (and other) transporter SMAL_RS19410 PF00156 Phosphoribosyl transferase domain SMAL_RS19425 PF00654 Voltage gated chloride channel SMAL_RS19435 PF06968 Biotin and Thiamin Synthesis associated domain SMAL_RS19435 PF04055 Radical SAM superfamily SMAL_RS19440 PF00155 Aminotransferase class I and II SMAL_RS19445 PF12697 Alpha/beta hydrolase family SMAL_RS19455 PF13649 Methyltransferase domain SMAL_RS19465 PF00291 Pyridoxal-phosphate dependent enzyme SMAL_RS19480 PF01134 Glucose inhibited division protein A SMAL_RS19480 PF13932 GidA associated domain SMAL_RS19485 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SMAL_RS19485 PF02321 Outer membrane efflux protein SMAL_RS19490 PF00873 AcrB/AcrD/AcrF family SMAL_RS19495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS19495 PF00529 HlyD membrane-fusion protein of T1SS SMAL_RS19500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS19500 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS19500 PF00672 HAMP domain SMAL_RS19505 PF00486 Transcriptional regulatory protein, C terminal SMAL_RS19505 PF00072 Response regulator receiver domain SMAL_RS19510 PF10127 RNA repair pathway DNA polymerase beta family SMAL_RS19515 PF00132 Bacterial transferase hexapeptide (six repeats) SMAL_RS19540 PF17863 AAA lid domain SMAL_RS19540 PF07726 ATPase family associated with various cellular activities (AAA) SMAL_RS19550 PF03738 Glutathionylspermidine synthase preATP-grasp SMAL_RS19560 PF00920 Dehydratase family SMAL_RS19575 PF13307 Helicase C-terminal domain SMAL_RS19575 PF06733 DEAD_2 SMAL_RS19585 PF01488 Shikimate / quinate 5-dehydrogenase SMAL_RS19585 PF08501 Shikimate dehydrogenase substrate binding domain SMAL_RS19585 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SMAL_RS19600 PF00490 Delta-aminolevulinic acid dehydratase SMAL_RS19605 PF01062 Bestrophin, RFP-TM, chloride channel SMAL_RS19630 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SMAL_RS19630 PF00326 Prolyl oligopeptidase family SMAL_RS19635 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS19635 PF02798 Glutathione S-transferase, N-terminal domain SMAL_RS19640 PF03350 Uncharacterized protein family, UPF0114 SMAL_RS19655 PF12833 Helix-turn-helix domain SMAL_RS19655 PF02311 AraC-like ligand binding domain SMAL_RS19670 PF00005 ABC transporter SMAL_RS19680 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS19690 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SMAL_RS19690 PF18416 N-acetylglucosamine binding protein domain 2 SMAL_RS19695 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SMAL_RS19695 PF18416 N-acetylglucosamine binding protein domain 2 SMAL_RS19700 PF00175 Oxidoreductase NAD-binding domain SMAL_RS19700 PF00111 2Fe-2S iron-sulfur cluster binding domain SMAL_RS19700 PF00970 Oxidoreductase FAD-binding domain SMAL_RS19705 PF00005 ABC transporter SMAL_RS19710 PF01061 ABC-2 type transporter SMAL_RS19720 PF02558 Ketopantoate reductase PanE/ApbA SMAL_RS19720 PF08546 Ketopantoate reductase PanE/ApbA C terminal SMAL_RS19730 PF01026 TatD related DNase SMAL_RS19735 PF00270 DEAD/DEAH box helicase SMAL_RS19735 PF04408 Helicase associated domain (HA2) SMAL_RS19735 PF08482 ATP-dependent helicase C-terminal SMAL_RS19735 PF00271 Helicase conserved C-terminal domain SMAL_RS19745 PF00849 RNA pseudouridylate synthase SMAL_RS19760 PF00248 Aldo/keto reductase family SMAL_RS19775 PF01139 tRNA-splicing ligase RtcB SMAL_RS19790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS19790 PF00672 HAMP domain SMAL_RS19795 PF03466 LysR substrate binding domain SMAL_RS19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS19800 PF07690 Major Facilitator Superfamily SMAL_RS19805 PF00248 Aldo/keto reductase family SMAL_RS19810 PF00561 alpha/beta hydrolase fold SMAL_RS19815 PF01906 Putative heavy-metal-binding SMAL_RS19820 PF13380 CoA binding domain SMAL_RS19820 PF13607 Succinyl-CoA ligase like flavodoxin domain SMAL_RS19820 PF00583 Acetyltransferase (GNAT) family SMAL_RS19825 PF00571 CBS domain SMAL_RS19825 PF01769 Divalent cation transporter SMAL_RS19825 PF03448 MgtE intracellular N domain SMAL_RS19830 PF00999 Sodium/hydrogen exchanger family SMAL_RS19830 PF02254 TrkA-N domain SMAL_RS19835 PF02661 Fic/DOC family SMAL_RS19835 PF12796 Ankyrin repeats (3 copies) SMAL_RS19840 PF05166 YcgL domain SMAL_RS19850 PF00109 Beta-ketoacyl synthase, N-terminal domain SMAL_RS19850 PF02801 Beta-ketoacyl synthase, C-terminal domain SMAL_RS19865 PF02801 Beta-ketoacyl synthase, C-terminal domain SMAL_RS19865 PF00109 Beta-ketoacyl synthase, N-terminal domain SMAL_RS19875 PF01494 FAD binding domain SMAL_RS19895 PF00221 Aromatic amino acid lyase SMAL_RS19905 PF00535 Glycosyl transferase family 2 SMAL_RS19920 PF00550 Phosphopantetheine attachment site SMAL_RS19925 PF00550 Phosphopantetheine attachment site SMAL_RS19940 PF02322 Cytochrome bd terminal oxidase subunit II SMAL_RS19945 PF01654 Cytochrome bd terminal oxidase subunit I SMAL_RS19965 PF08281 Sigma-70, region 4 SMAL_RS19965 PF04542 Sigma-70 region 2 SMAL_RS19980 PF00293 NUDIX domain SMAL_RS20000 PF01218 Coproporphyrinogen III oxidase SMAL_RS20010 PF04239 Protein of unknown function (DUF421) SMAL_RS20015 PF01612 3'-5' exonuclease SMAL_RS20015 PF00476 DNA polymerase family A SMAL_RS20015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMAL_RS20015 PF01367 5'-3' exonuclease, C-terminal SAM fold SMAL_RS20025 PF00582 Universal stress protein family SMAL_RS20040 PF00580 UvrD/REP helicase N-terminal domain SMAL_RS20040 PF13361 UvrD-like helicase C-terminal domain SMAL_RS20050 PF13396 Phospholipase_D-nuclease N-terminal SMAL_RS20050 PF13091 PLD-like domain SMAL_RS20055 PF00471 Ribosomal protein L33 SMAL_RS20060 PF00830 Ribosomal L28 family SMAL_RS20065 PF00929 Exonuclease SMAL_RS20070 PF03466 LysR substrate binding domain SMAL_RS20070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS20075 PF01042 Endoribonuclease L-PSP SMAL_RS20085 PF02321 Outer membrane efflux protein SMAL_RS20090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SMAL_RS20095 PF00873 AcrB/AcrD/AcrF family SMAL_RS20105 PF00665 Integrase core domain SMAL_RS20115 PF00535 Glycosyl transferase family 2 SMAL_RS20120 PF01370 NAD dependent epimerase/dehydratase family SMAL_RS20130 PF17762 HTH domain found in ParB protein SMAL_RS20130 PF02195 ParB-like nuclease domain SMAL_RS20135 PF13614 AAA domain SMAL_RS20140 PF02527 rRNA small subunit methyltransferase G SMAL_RS20145 PF01648 4'-phosphopantetheinyl transferase superfamily SMAL_RS20150 PF04226 Transglycosylase associated protein SMAL_RS20160 PF00171 Aldehyde dehydrogenase family SMAL_RS20165 PF08946 Osmosensory transporter coiled coil SMAL_RS20165 PF00083 Sugar (and other) transporter SMAL_RS20175 PF13193 AMP-binding enzyme C-terminal domain SMAL_RS20175 PF00501 AMP-binding enzyme SMAL_RS20175 PF16177 Acetyl-coenzyme A synthetase N-terminus SMAL_RS20180 PF00196 Bacterial regulatory proteins, luxR family SMAL_RS20180 PF00072 Response regulator receiver domain SMAL_RS20190 PF02659 Putative manganese efflux pump SMAL_RS20195 PF00512 His Kinase A (phospho-acceptor) domain SMAL_RS20195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMAL_RS20195 PF00072 Response regulator receiver domain SMAL_RS20195 PF09456 RcsC Alpha-Beta-Loop (ABL) SMAL_RS20200 PF10459 Peptidase S46 SMAL_RS20205 PF04357 TamB, inner membrane protein subunit of TAM complex SMAL_RS20210 PF07244 Surface antigen variable number repeat SMAL_RS20210 PF01103 Surface antigen SMAL_RS20210 PF17243 POTRA domain TamA domain 1 SMAL_RS20215 PF05746 DALR anticodon binding domain SMAL_RS20215 PF02092 Glycyl-tRNA synthetase beta subunit SMAL_RS20220 PF02091 Glycyl-tRNA synthetase alpha subunit SMAL_RS20225 PF00437 Type II/IV secretion system protein SMAL_RS20225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SMAL_RS20230 PF00117 Glutamine amidotransferase class-I SMAL_RS20230 PF00958 GMP synthase C terminal domain SMAL_RS20240 PF00902 Sec-independent protein translocase protein (TatC) SMAL_RS20245 PF02416 mttA/Hcf106 family SMAL_RS20250 PF02416 mttA/Hcf106 family SMAL_RS20260 PF00762 Ferrochelatase SMAL_RS20265 PF12697 Alpha/beta hydrolase family SMAL_RS20270 PF02203 Tar ligand binding domain homologue SMAL_RS20270 PF00672 HAMP domain SMAL_RS20270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SMAL_RS20325 PF03594 Benzoate membrane transport protein SMAL_RS20335 PF01263 Aldose 1-epimerase SMAL_RS20340 PF13406 Transglycosylase SLT domain SMAL_RS20345 PF10017 Histidine-specific methyltransferase, SAM-dependent SMAL_RS20350 PF12867 DinB superfamily SMAL_RS20350 PF03781 Sulfatase-modifying factor enzyme 1 SMAL_RS20355 PF00990 Diguanylate cyclase, GGDEF domain SMAL_RS20360 PF02810 SEC-C motif SMAL_RS20365 PF01925 Sulfite exporter TauE/SafE SMAL_RS20385 PF01227 GTP cyclohydrolase I SMAL_RS20395 PF07869 Protein of unknown function (DUF1656) SMAL_RS20400 PF13533 Biotin-lipoyl like SMAL_RS20405 PF02321 Outer membrane efflux protein SMAL_RS20410 PF04632 Fusaric acid resistance protein family SMAL_RS20420 PF13538 UvrD-like helicase C-terminal domain SMAL_RS20425 PF12705 PD-(D/E)XK nuclease superfamily SMAL_RS20425 PF00580 UvrD/REP helicase N-terminal domain SMAL_RS20425 PF13361 UvrD-like helicase C-terminal domain SMAL_RS20430 PF17946 RecC C-terminal domain SMAL_RS20435 PF00005 ABC transporter SMAL_RS20440 PF02405 Permease MlaE SMAL_RS20445 PF02470 MlaD protein SMAL_RS20460 PF04333 MlaA lipoprotein SMAL_RS20465 PF00255 Glutathione peroxidase SMAL_RS20475 PF02646 RmuC family SMAL_RS20480 PF00043 Glutathione S-transferase, C-terminal domain SMAL_RS20480 PF13417 Glutathione S-transferase, N-terminal domain SMAL_RS20485 PF08240 Alcohol dehydrogenase GroES-like domain SMAL_RS20485 PF00107 Zinc-binding dehydrogenase SMAL_RS20490 PF03466 LysR substrate binding domain SMAL_RS20490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMAL_RS20495 PF01810 LysE type translocator SMAL_RS20510 PF13520 Amino acid permease SMAL_RS20520 PF05816 Toxic anion resistance protein (TelA) SMAL_RS20530 PF10672 S-adenosylmethionine-dependent methyltransferase SMAL_RS20530 PF17785 PUA-like domain SMAL_RS20535 PF03741 Integral membrane protein TerC family SMAL_RS20540 PF01694 Rhomboid family SMAL_RS20545 PF03009 Glycerophosphoryl diester phosphodiesterase family SMAL_RS20560 PF10396 GTP-binding protein TrmE N-terminus SMAL_RS20560 PF01926 50S ribosome-binding GTPase SMAL_RS20560 PF12631 MnmE helical domain SMAL_RS20570 PF14849 YidC periplasmic domain SMAL_RS20570 PF02096 60Kd inner membrane protein SMAL_RS20575 PF00825 Ribonuclease P SMAL_RS20580 PF00468 Ribosomal protein L34 SMAL_RS20635 PF05662 Coiled stalk of trimeric autotransporter adhesin SMAL_RS20635 PF13018 Extended Signal Peptide of Type V secretion system SMAL_RS20635 PF03895 YadA-like membrane anchor domain SMAL_RS20635 PF05658 Head domain of trimeric autotransporter adhesin