locus-tag class description DM611_RS00005 PF00308 Bacterial dnaA protein DM611_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DM611_RS00005 PF11638 DnaA N-terminal domain DM611_RS00010 PF02767 DNA polymerase III beta subunit, central domain DM611_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DM611_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DM611_RS00015 PF02463 RecF/RecN/SMC N terminal domain DM611_RS00020 PF00204 DNA gyrase B DM611_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus DM611_RS00020 PF18053 DNA gyrase B subunit insert domain DM611_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS00020 PF01751 Toprim domain DM611_RS00025 PF02517 CPBP intramembrane metalloprotease DM611_RS00030 PF01435 Peptidase family M48 DM611_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal DM611_RS00045 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS00050 PF02472 Biopolymer transport protein ExbD/TolR DM611_RS00055 PF02472 Biopolymer transport protein ExbD/TolR DM611_RS00060 PF13091 PLD-like domain DM611_RS00060 PF13396 Phospholipase_D-nuclease N-terminal DM611_RS00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DM611_RS00075 PF04055 Radical SAM superfamily DM611_RS00100 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DM611_RS00105 PF00155 Aminotransferase class I and II DM611_RS00110 PF07715 TonB-dependent Receptor Plug Domain DM611_RS00110 PF00593 TonB dependent receptor DM611_RS00125 PF02735 Ku70/Ku80 beta-barrel domain DM611_RS00130 PF04679 ATP dependent DNA ligase C terminal region DM611_RS00130 PF13298 DNA polymerase Ligase (LigD) DM611_RS00130 PF01068 ATP dependent DNA ligase domain DM611_RS00140 PF00107 Zinc-binding dehydrogenase DM611_RS00140 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS00145 PF01081 KDPG and KHG aldolase DM611_RS00155 PF00356 Bacterial regulatory proteins, lacI family DM611_RS00160 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DM611_RS00165 PF01037 Lrp/AsnC ligand binding domain DM611_RS00175 PF01734 Patatin-like phospholipase DM611_RS00185 PF07715 TonB-dependent Receptor Plug Domain DM611_RS00185 PF00593 TonB dependent receptor DM611_RS00190 PF01569 PAP2 superfamily DM611_RS00205 PF00005 ABC transporter DM611_RS00225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DM611_RS00225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DM611_RS00225 PF06827 Zinc finger found in FPG and IleRS DM611_RS00230 PF04349 Periplasmic glucan biosynthesis protein, MdoG DM611_RS00235 PF00265 Thymidine kinase DM611_RS00240 PF00580 UvrD/REP helicase N-terminal domain DM611_RS00240 PF13361 UvrD-like helicase C-terminal domain DM611_RS00250 PF01527 Transposase DM611_RS00265 PF04337 Protein of unknown function, DUF480 DM611_RS00270 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DM611_RS00275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DM611_RS00285 PF01553 Acyltransferase DM611_RS00295 PF01171 PP-loop family DM611_RS00300 PF04381 Putative exonuclease, RdgC DM611_RS00310 PF02142 MGS-like domain DM611_RS00315 PF01627 Hpt domain DM611_RS00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM611_RS00315 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS00315 PF00989 PAS fold DM611_RS00315 PF00072 Response regulator receiver domain DM611_RS00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS00320 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS00320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DM611_RS00325 PF01493 GXGXG motif DM611_RS00325 PF01645 Conserved region in glutamate synthase DM611_RS00325 PF04898 Glutamate synthase central domain DM611_RS00325 PF00310 Glutamine amidotransferases class-II DM611_RS00345 PF00144 Beta-lactamase DM611_RS00350 PF02311 AraC-like ligand binding domain DM611_RS00350 PF12833 Helix-turn-helix domain DM611_RS00360 PF07690 Major Facilitator Superfamily DM611_RS00365 PF00593 TonB dependent receptor DM611_RS00365 PF07715 TonB-dependent Receptor Plug Domain DM611_RS00420 PF01882 Protein of unknown function DUF58 DM611_RS00425 PF17863 AAA lid domain DM611_RS00425 PF07726 ATPase family associated with various cellular activities (AAA) DM611_RS00445 PF01523 Putative modulator of DNA gyrase DM611_RS00465 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS00465 PF01434 Peptidase family M41 DM611_RS00465 PF17862 AAA+ lid domain DM611_RS00485 PF13091 PLD-like domain DM611_RS00490 PF03061 Thioesterase superfamily DM611_RS00510 PF01161 Phosphatidylethanolamine-binding protein DM611_RS00515 PF03358 NADPH-dependent FMN reductase DM611_RS00525 PF02673 Bacitracin resistance protein BacA DM611_RS00530 PF00120 Glutamine synthetase, catalytic domain DM611_RS00530 PF03951 Glutamine synthetase, beta-Grasp domain DM611_RS00535 PF00543 Nitrogen regulatory protein P-II DM611_RS00540 PF00909 Ammonium Transporter Family DM611_RS00570 PF03562 MltA specific insert domain DM611_RS00570 PF06725 3D domain DM611_RS00580 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS00580 PF00989 PAS fold DM611_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS00585 PF02954 Bacterial regulatory protein, Fis family DM611_RS00585 PF00072 Response regulator receiver domain DM611_RS00585 PF00158 Sigma-54 interaction domain DM611_RS00590 PF00080 Copper/zinc superoxide dismutase (SODC) DM611_RS00595 PF00080 Copper/zinc superoxide dismutase (SODC) DM611_RS00605 PF02803 Thiolase, C-terminal domain DM611_RS00605 PF00108 Thiolase, N-terminal domain DM611_RS00640 PF02556 Preprotein translocase subunit SecB DM611_RS00645 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DM611_RS00645 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DM611_RS00695 PF12833 Helix-turn-helix domain DM611_RS00710 PF04261 Dyp-type peroxidase family DM611_RS00740 PF00196 Bacterial regulatory proteins, luxR family DM611_RS00740 PF00072 Response regulator receiver domain DM611_RS00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS00745 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS00745 PF01627 Hpt domain DM611_RS00745 PF00989 PAS fold DM611_RS00745 PF00072 Response regulator receiver domain DM611_RS00745 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM611_RS00760 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS00760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS00760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM611_RS00765 PF00588 SpoU rRNA Methylase family DM611_RS00775 PF05193 Peptidase M16 inactive domain DM611_RS00775 PF00675 Insulinase (Peptidase family M16) DM611_RS00785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DM611_RS00785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM611_RS00790 PF00561 alpha/beta hydrolase fold DM611_RS00800 PF00501 AMP-binding enzyme DM611_RS00805 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DM611_RS00815 PF01820 D-ala D-ala ligase N-terminus DM611_RS00815 PF07478 D-ala D-ala ligase C-terminus DM611_RS00825 PF03109 ABC1 family DM611_RS00830 PF01596 O-methyltransferase DM611_RS00835 PF04287 tRNA pseudouridine synthase C DM611_RS00835 PF00849 RNA pseudouridylate synthase DM611_RS00845 PF00472 RF-1 domain DM611_RS00855 PF01432 Peptidase family M3 DM611_RS00870 PF10502 Signal peptidase, peptidase S26 DM611_RS00875 PF07690 Major Facilitator Superfamily DM611_RS00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS00880 PF03466 LysR substrate binding domain DM611_RS00895 PF03466 LysR substrate binding domain DM611_RS00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS00900 PF01274 Malate synthase DM611_RS00905 PF00463 Isocitrate lyase family DM611_RS00910 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS00930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM611_RS00930 PF00364 Biotin-requiring enzyme DM611_RS00930 PF02785 Biotin carboxylase C-terminal domain DM611_RS00930 PF00289 Biotin carboxylase, N-terminal domain DM611_RS00935 PF01039 Carboxyl transferase domain DM611_RS00940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS00940 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS00940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM611_RS00970 PF03969 AFG1-like ATPase DM611_RS00985 PF03477 ATP cone domain DM611_RS00985 PF02867 Ribonucleotide reductase, barrel domain DM611_RS00985 PF00317 Ribonucleotide reductase, all-alpha domain DM611_RS00990 PF00268 Ribonucleotide reductase, small chain DM611_RS01000 PF01810 LysE type translocator DM611_RS01005 PF03061 Thioesterase superfamily DM611_RS01010 PF02146 Sir2 family DM611_RS01015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM611_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS01020 PF03466 LysR substrate binding domain DM611_RS01025 PF00551 Formyl transferase DM611_RS01030 PF00857 Isochorismatase family DM611_RS01035 PF02677 Epoxyqueuosine reductase QueH DM611_RS01045 PF01467 Cytidylyltransferase-like DM611_RS01045 PF00293 NUDIX domain DM611_RS01050 PF01734 Patatin-like phospholipase DM611_RS01065 PF09856 Predicted transcriptional regulator (DUF2083) DM611_RS01065 PF06114 IrrE N-terminal-like domain DM611_RS01065 PF01381 Helix-turn-helix DM611_RS01070 PF00171 Aldehyde dehydrogenase family DM611_RS01075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM611_RS01075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS01075 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS01080 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS01085 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS01090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM611_RS01090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM611_RS01095 PF02566 OsmC-like protein DM611_RS01105 PF01740 STAS domain DM611_RS01105 PF00916 Sulfate permease family DM611_RS01115 PF01207 Dihydrouridine synthase (Dus) DM611_RS01125 PF00486 Transcriptional regulatory protein, C terminal DM611_RS01125 PF00072 Response regulator receiver domain DM611_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS01140 PF06167 Glucose-regulated metallo-peptidase M90 DM611_RS01150 PF03099 Biotin/lipoate A/B protein ligase family DM611_RS01150 PF08279 HTH domain DM611_RS01150 PF02237 Biotin protein ligase C terminal domain DM611_RS01155 PF03309 Type III pantothenate kinase DM611_RS01210 PF00491 Arginase family DM611_RS01220 PF05532 CsbD-like DM611_RS01230 PF00579 tRNA synthetases class I (W and Y) DM611_RS01240 PF12706 Beta-lactamase superfamily domain DM611_RS01255 PF00083 Sugar (and other) transporter DM611_RS01260 PF00892 EamA-like transporter family DM611_RS01265 PF00892 EamA-like transporter family DM611_RS01270 PF07715 TonB-dependent Receptor Plug Domain DM611_RS01270 PF00593 TonB dependent receptor DM611_RS01280 PF00005 ABC transporter DM611_RS01280 PF12704 MacB-like periplasmic core domain DM611_RS01280 PF02687 FtsX-like permease family DM611_RS01290 PF00005 ABC transporter DM611_RS01295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS01300 PF00005 ABC transporter DM611_RS01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS01310 PF07730 Histidine kinase DM611_RS01315 PF00196 Bacterial regulatory proteins, luxR family DM611_RS01315 PF00072 Response regulator receiver domain DM611_RS01330 PF00883 Cytosol aminopeptidase family, catalytic domain DM611_RS01330 PF02789 Cytosol aminopeptidase family, N-terminal domain DM611_RS01335 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS01340 PF01594 AI-2E family transporter DM611_RS01360 PF13180 PDZ domain DM611_RS01360 PF00595 PDZ domain DM611_RS01375 PF07237 Protein of unknown function (DUF1428) DM611_RS01385 PF00196 Bacterial regulatory proteins, luxR family DM611_RS01385 PF00072 Response regulator receiver domain DM611_RS01400 PF07690 Major Facilitator Superfamily DM611_RS01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS01405 PF03466 LysR substrate binding domain DM611_RS01410 PF07308 Protein of unknown function (DUF1456) DM611_RS01415 PF00106 short chain dehydrogenase DM611_RS01425 PF00750 tRNA synthetases class I (R) DM611_RS01425 PF03485 Arginyl tRNA synthetase N terminal domain DM611_RS01425 PF05746 DALR anticodon binding domain DM611_RS01430 PF04002 RadC-like JAB domain DM611_RS01435 PF00196 Bacterial regulatory proteins, luxR family DM611_RS01435 PF00072 Response regulator receiver domain DM611_RS01440 PF02441 Flavoprotein DM611_RS01440 PF04127 DNA / pantothenate metabolism flavoprotein DM611_RS01445 PF00692 dUTPase DM611_RS01450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM611_RS01450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM611_RS01450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM611_RS01450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM611_RS01455 PF00072 Response regulator receiver domain DM611_RS01455 PF00486 Transcriptional regulatory protein, C terminal DM611_RS01460 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS01460 PF02702 Osmosensitive K+ channel His kinase sensor domain DM611_RS01460 PF13493 Domain of unknown function (DUF4118) DM611_RS01460 PF13492 GAF domain DM611_RS01465 PF02669 K+-transporting ATPase, c chain DM611_RS01475 PF03814 Potassium-transporting ATPase A subunit DM611_RS01490 PF00156 Phosphoribosyl transferase domain DM611_RS01495 PF03372 Endonuclease/Exonuclease/phosphatase family DM611_RS01500 PF07690 Major Facilitator Superfamily DM611_RS01510 PF03702 Anhydro-N-acetylmuramic acid kinase DM611_RS01515 PF04225 Opacity-associated protein A LysM-like domain DM611_RS01515 PF01551 Peptidase family M23 DM611_RS01520 PF00579 tRNA synthetases class I (W and Y) DM611_RS01580 PF04389 Peptidase family M28 DM611_RS01590 PF01551 Peptidase family M23 DM611_RS01595 PF13180 PDZ domain DM611_RS01595 PF03572 Peptidase family S41 DM611_RS01610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DM611_RS01615 PF04973 Nicotinamide mononucleotide transporter DM611_RS01625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DM611_RS01625 PF00171 Aldehyde dehydrogenase family DM611_RS01625 PF01619 Proline dehydrogenase DM611_RS01625 PF14850 DNA-binding domain of Proline dehydrogenase DM611_RS01635 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM611_RS01635 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DM611_RS01640 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM611_RS01650 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DM611_RS01655 PF00510 Cytochrome c oxidase subunit III DM611_RS01665 PF02104 SURF1 family DM611_RS01680 PF01040 UbiA prenyltransferase family DM611_RS01690 PF13593 SBF-like CPA transporter family (DUF4137) DM611_RS01700 PF10410 DnaB-helicase binding domain of primase DM611_RS01700 PF01807 CHC2 zinc finger DM611_RS01700 PF08278 DNA primase DnaG DnaB-binding DM611_RS01700 PF08275 DNA primase catalytic core, N-terminal domain DM611_RS01705 PF03631 Virulence factor BrkB DM611_RS01720 PF01165 Ribosomal protein S21 DM611_RS01725 PF00814 Glycoprotease family DM611_RS01735 PF02152 Dihydroneopterin aldolase DM611_RS01740 PF00924 Mechanosensitive ion channel DM611_RS01745 PF01915 Glycosyl hydrolase family 3 C-terminal domain DM611_RS01745 PF14310 Fibronectin type III-like domain DM611_RS01745 PF00933 Glycosyl hydrolase family 3 N terminal domain DM611_RS01755 PF07995 Glucose / Sorbosone dehydrogenase DM611_RS01760 PF05360 yiaA/B two helix domain DM611_RS01770 PF13520 Amino acid permease DM611_RS01780 PF01418 Helix-turn-helix domain, rpiR family DM611_RS01780 PF01380 SIS domain DM611_RS01785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM611_RS01785 PF13378 Enolase C-terminal domain-like DM611_RS01800 PF00593 TonB dependent receptor DM611_RS01800 PF00593 TonB dependent receptor DM611_RS01805 PF00144 Beta-lactamase DM611_RS01810 PF01427 D-ala-D-ala dipeptidase DM611_RS01845 PF07063 Domain of unknown function (DUF1338) DM611_RS01850 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DM611_RS01850 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DM611_RS01855 PF03710 Glutamate-ammonia ligase adenylyltransferase DM611_RS01855 PF08335 GlnD PII-uridylyltransferase DM611_RS01860 PF02592 Putative vitamin uptake transporter DM611_RS01885 PF00881 Nitroreductase family DM611_RS01890 PF04264 YceI-like domain DM611_RS01905 PF08021 Siderophore-interacting FAD-binding domain DM611_RS01905 PF04954 Siderophore-interacting protein DM611_RS01910 PF03551 Transcriptional regulator PadR-like family DM611_RS01915 PF17831 Pyruvate dehydrogenase E1 component middle domain DM611_RS01915 PF00456 Transketolase, thiamine diphosphate binding domain DM611_RS01925 PF00069 Protein kinase domain DM611_RS01940 PF09019 EcoRII C terminal DM611_RS01945 PF03852 DNA mismatch endonuclease Vsr DM611_RS01950 PF00145 C-5 cytosine-specific DNA methylase DM611_RS01950 PF18284 DNA methylase N-terminal domain DM611_RS01980 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS01980 PF17862 AAA+ lid domain DM611_RS01980 PF06480 FtsH Extracellular DM611_RS01980 PF01434 Peptidase family M41 DM611_RS02015 PF18337 RapA N-terminal Tudor like domain DM611_RS02015 PF00271 Helicase conserved C-terminal domain DM611_RS02015 PF00176 SNF2 family N-terminal domain DM611_RS02015 PF12137 RNA polymerase recycling family C-terminal DM611_RS02015 PF18339 RapA N-terminal Tudor like domain 1 DM611_RS02040 PF00561 alpha/beta hydrolase fold DM611_RS02075 PF01545 Cation efflux family DM611_RS02075 PF16916 Dimerisation domain of Zinc Transporter DM611_RS02080 PF02583 Metal-sensitive transcriptional repressor DM611_RS02090 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM611_RS02090 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM611_RS02095 PF12848 ABC transporter DM611_RS02095 PF00005 ABC transporter DM611_RS02100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS02100 PF03466 LysR substrate binding domain DM611_RS02105 PF00144 Beta-lactamase DM611_RS02110 PF07690 Major Facilitator Superfamily DM611_RS02115 PF00563 EAL domain DM611_RS02115 PF12792 CSS motif domain associated with EAL DM611_RS02120 PF00324 Amino acid permease DM611_RS02125 PF01464 Transglycosylase SLT domain DM611_RS02150 PF06983 3-demethylubiquinone-9 3-methyltransferase DM611_RS02160 PF07237 Protein of unknown function (DUF1428) DM611_RS02165 PF08281 Sigma-70, region 4 DM611_RS02165 PF04542 Sigma-70 region 2 DM611_RS02175 PF07694 5TMR of 5TMR-LYT DM611_RS02175 PF06580 Histidine kinase DM611_RS02180 PF00072 Response regulator receiver domain DM611_RS02180 PF04397 LytTr DNA-binding domain DM611_RS02200 PF00440 Bacterial regulatory proteins, tetR family DM611_RS02210 PF07690 Major Facilitator Superfamily DM611_RS02215 PF01431 Peptidase family M13 DM611_RS02215 PF05649 Peptidase family M13 DM611_RS02220 PF08448 PAS fold DM611_RS02220 PF08447 PAS fold DM611_RS02220 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS02220 PF00563 EAL domain DM611_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS02225 PF03466 LysR substrate binding domain DM611_RS02235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DM611_RS02240 PF00999 Sodium/hydrogen exchanger family DM611_RS02265 PF13677 Membrane MotB of proton-channel complex MotA/MotB DM611_RS02265 PF00691 OmpA family DM611_RS02270 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS02275 PF01641 SelR domain DM611_RS02290 PF01037 Lrp/AsnC ligand binding domain DM611_RS02295 PF01266 FAD dependent oxidoreductase DM611_RS02300 PF00842 Alanine racemase, C-terminal domain DM611_RS02300 PF01168 Alanine racemase, N-terminal domain DM611_RS02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS02310 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS02310 PF18698 Histidine kinase sensor domain DM611_RS02310 PF00672 HAMP domain DM611_RS02310 PF00989 PAS fold DM611_RS02325 PF08468 Methyltransferase small domain N-terminal DM611_RS02325 PF05175 Methyltransferase small domain DM611_RS02330 PF01479 S4 domain DM611_RS02330 PF00849 RNA pseudouridylate synthase DM611_RS02335 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS02340 PF02801 Beta-ketoacyl synthase, C-terminal domain DM611_RS02340 PF00109 Beta-ketoacyl synthase, N-terminal domain DM611_RS02345 PF07977 FabA-like domain DM611_RS02350 PF11798 IMS family HHH motif DM611_RS02350 PF11799 impB/mucB/samB family C-terminal domain DM611_RS02350 PF00817 impB/mucB/samB family DM611_RS02370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS02370 PF03466 LysR substrate binding domain DM611_RS02375 PF08241 Methyltransferase domain DM611_RS02380 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS02385 PF07715 TonB-dependent Receptor Plug Domain DM611_RS02385 PF00593 TonB dependent receptor DM611_RS02405 PF13185 GAF domain DM611_RS02425 PF00155 Aminotransferase class I and II DM611_RS02425 PF00392 Bacterial regulatory proteins, gntR family DM611_RS02430 PF01625 Peptide methionine sulfoxide reductase DM611_RS02435 PF17991 Thioredoxin like C-terminal domain DM611_RS02435 PF02683 Cytochrome C biogenesis protein transmembrane region DM611_RS02435 PF00578 AhpC/TSA family DM611_RS02440 PF01641 SelR domain DM611_RS02445 PF00486 Transcriptional regulatory protein, C terminal DM611_RS02445 PF00072 Response regulator receiver domain DM611_RS02450 PF08448 PAS fold DM611_RS02450 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DM611_RS02450 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS02450 PF00672 HAMP domain DM611_RS02455 PF00672 HAMP domain DM611_RS02455 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS02460 PF00072 Response regulator receiver domain DM611_RS02460 PF00486 Transcriptional regulatory protein, C terminal DM611_RS02465 PF00733 Asparagine synthase DM611_RS02465 PF13537 Glutamine amidotransferase domain DM611_RS02475 PF01242 6-pyruvoyl tetrahydropterin synthase DM611_RS02480 PF00593 TonB dependent receptor DM611_RS02480 PF07715 TonB-dependent Receptor Plug Domain DM611_RS02490 PF00271 Helicase conserved C-terminal domain DM611_RS02490 PF00270 DEAD/DEAH box helicase DM611_RS02500 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS02500 PF14497 Glutathione S-transferase, C-terminal domain DM611_RS02505 PF00437 Type II/IV secretion system protein DM611_RS02525 PF00571 CBS domain DM611_RS02525 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS02550 PF00005 ABC transporter DM611_RS02560 PF01053 Cys/Met metabolism PLP-dependent enzyme DM611_RS02570 PF00766 Electron transfer flavoprotein FAD-binding domain DM611_RS02570 PF01012 Electron transfer flavoprotein domain DM611_RS02575 PF01012 Electron transfer flavoprotein domain DM611_RS02585 PF01695 IstB-like ATP binding protein DM611_RS02600 PF16363 GDP-mannose 4,6 dehydratase DM611_RS02605 PF00483 Nucleotidyl transferase DM611_RS02610 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DM611_RS02615 PF04321 RmlD substrate binding domain DM611_RS02620 PF00483 Nucleotidyl transferase DM611_RS02620 PF01050 Mannose-6-phosphate isomerase DM611_RS02625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM611_RS02625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM611_RS02625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM611_RS02625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM611_RS02630 PF12419 SNF2 Helicase protein DM611_RS02630 PF00176 SNF2 family N-terminal domain DM611_RS02630 PF00271 Helicase conserved C-terminal domain DM611_RS02635 PF01144 Coenzyme A transferase DM611_RS02640 PF01144 Coenzyme A transferase DM611_RS02645 PF14307 Glycosyltransferase WbsX DM611_RS02645 PF05045 Rhamnan synthesis protein F DM611_RS02665 PF00005 ABC transporter DM611_RS02670 PF02405 Permease MlaE DM611_RS02680 PF00816 H-NS histone family DM611_RS02685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM611_RS02685 PF03129 Anticodon binding domain DM611_RS02685 PF04073 Aminoacyl-tRNA editing domain DM611_RS02700 PF01066 CDP-alcohol phosphatidyltransferase DM611_RS02710 PF00583 Acetyltransferase (GNAT) family DM611_RS02720 PF00133 tRNA synthetases class I (I, L, M and V) DM611_RS02720 PF10458 Valyl tRNA synthetase tRNA binding arm DM611_RS02720 PF08264 Anticodon-binding domain of tRNA DM611_RS02735 PF02789 Cytosol aminopeptidase family, N-terminal domain DM611_RS02735 PF00883 Cytosol aminopeptidase family, catalytic domain DM611_RS02745 PF03739 Lipopolysaccharide export system permease LptF/LptG DM611_RS02760 PF02899 Phage integrase, N-terminal SAM-like domain DM611_RS02760 PF00589 Phage integrase family DM611_RS02765 PF13098 Thioredoxin-like domain DM611_RS02765 PF10411 Disulfide bond isomerase protein N-terminus DM611_RS02770 PF00704 Glycosyl hydrolases family 18 DM611_RS02770 PF00041 Fibronectin type III domain DM611_RS02770 PF00553 Cellulose binding domain DM611_RS02780 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DM611_RS02780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DM611_RS02780 PF02769 AIR synthase related protein, C-terminal domain DM611_RS02785 PF13018 Extended Signal Peptide of Type V secretion system DM611_RS02785 PF03895 YadA-like membrane anchor domain DM611_RS02785 PF05658 Head domain of trimeric autotransporter adhesin DM611_RS02785 PF05662 Coiled stalk of trimeric autotransporter adhesin DM611_RS02790 PF00082 Subtilase family DM611_RS02790 PF04151 Bacterial pre-peptidase C-terminal domain DM611_RS02795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DM611_RS02795 PF00437 Type II/IV secretion system protein DM611_RS02800 PF00482 Type II secretion system (T2SS), protein F DM611_RS02805 PF08334 Type II secretion system (T2SS), protein G DM611_RS02810 PF12019 Type II transport protein GspH DM611_RS02815 PF07963 Prokaryotic N-terminal methylation motif DM611_RS02825 PF03934 Type II secretion system (T2SS), protein K DM611_RS02830 PF05137 Fimbrial assembly protein (PilN) DM611_RS02835 PF10741 Type II secretion system (T2SS), protein M subtype b DM611_RS02845 PF00263 Bacterial type II and III secretion system protein DM611_RS02845 PF03958 Bacterial type II/III secretion system short domain DM611_RS02860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DM611_RS02860 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DM611_RS02870 PF16970 Type-1 fimbrial protein, A DM611_RS02875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM611_RS02875 PF02753 Pili assembly chaperone PapD, C-terminal domain DM611_RS02880 PF13954 PapC N-terminal domain DM611_RS02880 PF00577 Outer membrane usher protein DM611_RS02880 PF13953 PapC C-terminal domain DM611_RS02890 PF02350 UDP-N-acetylglucosamine 2-epimerase DM611_RS02900 PF13632 Glycosyl transferase family group 2 DM611_RS02900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DM611_RS02915 PF00860 Permease family DM611_RS02920 PF12848 ABC transporter DM611_RS02920 PF00005 ABC transporter DM611_RS02930 PF00464 Serine hydroxymethyltransferase DM611_RS02945 PF03477 ATP cone domain DM611_RS02950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DM611_RS02950 PF01872 RibD C-terminal domain DM611_RS03000 PF00677 Lumazine binding domain DM611_RS03005 PF00925 GTP cyclohydrolase II DM611_RS03005 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DM611_RS03010 PF00885 6,7-dimethyl-8-ribityllumazine synthase DM611_RS03015 PF01029 NusB family DM611_RS03020 PF02769 AIR synthase related protein, C-terminal domain DM611_RS03020 PF00586 AIR synthase related protein, N-terminal domain DM611_RS03030 PF01757 Acyltransferase family DM611_RS03035 PF01565 FAD binding domain DM611_RS03035 PF02913 FAD linked oxidases, C-terminal domain DM611_RS03040 PF04307 LexA-binding, inner membrane-associated putative hydrolase DM611_RS03045 PF02021 Uncharacterised protein family UPF0102 DM611_RS03055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM611_RS03075 PF02381 MraZ protein, putative antitoxin-like DM611_RS03080 PF01795 MraW methylase family DM611_RS03085 PF04999 Cell division protein FtsL DM611_RS03090 PF03717 Penicillin-binding Protein dimerisation domain DM611_RS03090 PF00905 Penicillin binding protein transpeptidase domain DM611_RS03095 PF02875 Mur ligase family, glutamate ligase domain DM611_RS03095 PF08245 Mur ligase middle domain DM611_RS03095 PF01225 Mur ligase family, catalytic domain DM611_RS03100 PF01225 Mur ligase family, catalytic domain DM611_RS03100 PF02875 Mur ligase family, glutamate ligase domain DM611_RS03100 PF08245 Mur ligase middle domain DM611_RS03105 PF00953 Glycosyl transferase family 4 DM611_RS03110 PF01098 Cell cycle protein DM611_RS03115 PF04101 Glycosyltransferase family 28 C-terminal domain DM611_RS03115 PF03033 Glycosyltransferase family 28 N-terminal domain DM611_RS03120 PF08245 Mur ligase middle domain DM611_RS03120 PF02875 Mur ligase family, glutamate ligase domain DM611_RS03120 PF01225 Mur ligase family, catalytic domain DM611_RS03125 PF07478 D-ala D-ala ligase C-terminus DM611_RS03125 PF01820 D-ala D-ala ligase N-terminus DM611_RS03130 PF08478 POTRA domain, FtsQ-type DM611_RS03130 PF03799 Cell division protein FtsQ DM611_RS03135 PF02491 SHS2 domain inserted in FTSA DM611_RS03140 PF12327 FtsZ family, C-terminal domain DM611_RS03140 PF00091 Tubulin/FtsZ family, GTPase domain DM611_RS03145 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DM611_RS03155 PF01551 Peptidase family M23 DM611_RS03155 PF08525 Opacity-associated protein A N-terminal motif DM611_RS03155 PF01476 LysM domain DM611_RS03160 PF01043 SecA preprotein cross-linking domain DM611_RS03160 PF07516 SecA Wing and Scaffold domain DM611_RS03160 PF02810 SEC-C motif DM611_RS03160 PF07517 SecA DEAD-like domain DM611_RS03165 PF00293 NUDIX domain DM611_RS03175 PF02219 Methylenetetrahydrofolate reductase DM611_RS03180 PF00561 alpha/beta hydrolase fold DM611_RS03185 PF07694 5TMR of 5TMR-LYT DM611_RS03185 PF13492 GAF domain DM611_RS03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS03185 PF06580 Histidine kinase DM611_RS03190 PF00072 Response regulator receiver domain DM611_RS03190 PF04397 LytTr DNA-binding domain DM611_RS03195 PF01979 Amidohydrolase family DM611_RS03215 PF04073 Aminoacyl-tRNA editing domain DM611_RS03220 PF05221 S-adenosyl-L-homocysteine hydrolase DM611_RS03220 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM611_RS03230 PF00311 Phosphoenolpyruvate carboxylase DM611_RS03240 PF03061 Thioesterase superfamily DM611_RS03245 PF02772 S-adenosylmethionine synthetase, central domain DM611_RS03245 PF00438 S-adenosylmethionine synthetase, N-terminal domain DM611_RS03245 PF02773 S-adenosylmethionine synthetase, C-terminal domain DM611_RS03265 PF13847 Methyltransferase domain DM611_RS03270 PF01207 Dihydrouridine synthase (Dus) DM611_RS03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS03280 PF03466 LysR substrate binding domain DM611_RS03285 PF07690 Major Facilitator Superfamily DM611_RS03290 PF00294 pfkB family carbohydrate kinase DM611_RS03295 PF07662 Na+ dependent nucleoside transporter C-terminus DM611_RS03295 PF07670 Nucleoside recognition DM611_RS03295 PF01773 Na+ dependent nucleoside transporter N-terminus DM611_RS03300 PF00248 Aldo/keto reductase family DM611_RS03310 PF00593 TonB dependent receptor DM611_RS03310 PF07715 TonB-dependent Receptor Plug Domain DM611_RS03335 PF00005 ABC transporter DM611_RS03340 PF13472 GDSL-like Lipase/Acylhydrolase family DM611_RS03345 PF00072 Response regulator receiver domain DM611_RS03345 PF00486 Transcriptional regulatory protein, C terminal DM611_RS03350 PF08521 Two-component sensor kinase N-terminal DM611_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS03350 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS03360 PF01219 Prokaryotic diacylglycerol kinase DM611_RS03365 PF03741 Integral membrane protein TerC family DM611_RS03370 PF07690 Major Facilitator Superfamily DM611_RS03375 PF04011 LemA family DM611_RS03390 PF01790 Prolipoprotein diacylglyceryl transferase DM611_RS03395 PF00303 Thymidylate synthase DM611_RS03400 PF00186 Dihydrofolate reductase DM611_RS03405 PF06940 Domain of unknown function (DUF1287) DM611_RS03410 PF00149 Calcineurin-like phosphoesterase DM611_RS03415 PF04379 ApaG domain DM611_RS03420 PF00398 Ribosomal RNA adenine dimethylase DM611_RS03425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DM611_RS03430 PF09312 SurA N-terminal domain DM611_RS03430 PF00639 PPIC-type PPIASE domain DM611_RS03435 PF03968 OstA-like protein DM611_RS03435 PF04453 LPS transport system D DM611_RS03440 PF00850 Histone deacetylase domain DM611_RS03445 PF01923 Cobalamin adenosyltransferase DM611_RS03455 PF01494 FAD binding domain DM611_RS03460 PF01494 FAD binding domain DM611_RS03470 PF01728 FtsJ-like methyltransferase DM611_RS03470 PF18125 RlmM ferredoxin-like domain DM611_RS03490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DM611_RS03490 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM611_RS03500 PF01625 Peptide methionine sulfoxide reductase DM611_RS03505 PF00923 Transaldolase/Fructose-6-phosphate aldolase DM611_RS03510 PF01272 Transcription elongation factor, GreA/GreB, C-term DM611_RS03510 PF14760 Rnk N-terminus DM611_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS03515 PF03466 LysR substrate binding domain DM611_RS03520 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS03520 PF13192 Thioredoxin domain DM611_RS03525 PF10417 C-terminal domain of 1-Cys peroxiredoxin DM611_RS03525 PF00578 AhpC/TSA family DM611_RS03530 PF05175 Methyltransferase small domain DM611_RS03530 PF17827 PrmC N-terminal domain DM611_RS03535 PF00561 alpha/beta hydrolase fold DM611_RS03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS03540 PF03466 LysR substrate binding domain DM611_RS03545 PF07690 Major Facilitator Superfamily DM611_RS03560 PF00293 NUDIX domain DM611_RS03565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DM611_RS03565 PF01367 5'-3' exonuclease, C-terminal SAM fold DM611_RS03565 PF00476 DNA polymerase family A DM611_RS03565 PF01612 3'-5' exonuclease DM611_RS03580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DM611_RS03580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DM611_RS03580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DM611_RS03600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DM611_RS03605 PF02233 NAD(P) transhydrogenase beta subunit DM611_RS03615 PF01883 Iron-sulfur cluster assembly protein DM611_RS03620 PF01063 Amino-transferase class IV DM611_RS03625 PF00082 Subtilase family DM611_RS03625 PF04151 Bacterial pre-peptidase C-terminal domain DM611_RS03640 PF03358 NADPH-dependent FMN reductase DM611_RS03645 PF03631 Virulence factor BrkB DM611_RS03650 PF00578 AhpC/TSA family DM611_RS03655 PF03976 Polyphosphate kinase 2 (PPK2) DM611_RS03665 PF03462 PCRF domain DM611_RS03665 PF00472 RF-1 domain DM611_RS03670 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DM611_RS03670 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DM611_RS03670 PF01488 Shikimate / quinate 5-dehydrogenase DM611_RS03680 PF03550 Outer membrane lipoprotein LolB DM611_RS03685 PF00288 GHMP kinases N terminal domain DM611_RS03685 PF08544 GHMP kinases C terminal DM611_RS03695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DM611_RS03695 PF14572 Phosphoribosyl synthetase-associated domain DM611_RS03700 PF14693 Ribosomal protein TL5, C-terminal domain DM611_RS03700 PF01386 Ribosomal L25p family DM611_RS03705 PF01195 Peptidyl-tRNA hydrolase DM611_RS03710 PF06071 Protein of unknown function (DUF933) DM611_RS03710 PF01926 50S ribosome-binding GTPase DM611_RS03715 PF12951 Passenger-associated-transport-repeat DM611_RS03715 PF03797 Autotransporter beta-domain DM611_RS03720 PF00196 Bacterial regulatory proteins, luxR family DM611_RS03720 PF00072 Response regulator receiver domain DM611_RS03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS03725 PF00072 Response regulator receiver domain DM611_RS03725 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS03725 PF09456 RcsC Alpha-Beta-Loop (ABL) DM611_RS03730 PF00360 Phytochrome region DM611_RS03730 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS03730 PF01590 GAF domain DM611_RS03730 PF00563 EAL domain DM611_RS03735 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS03735 PF09456 RcsC Alpha-Beta-Loop (ABL) DM611_RS03735 PF00072 Response regulator receiver domain DM611_RS03740 PF00593 TonB dependent receptor DM611_RS03740 PF07715 TonB-dependent Receptor Plug Domain DM611_RS03745 PF03575 Peptidase family S51 DM611_RS03750 PF01112 Asparaginase DM611_RS03770 PF00009 Elongation factor Tu GTP binding domain DM611_RS03770 PF03143 Elongation factor Tu C-terminal domain DM611_RS03770 PF03144 Elongation factor Tu domain 2 DM611_RS03780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DM611_RS03785 PF00467 KOW motif DM611_RS03785 PF02357 Transcription termination factor nusG DM611_RS03790 PF00298 Ribosomal protein L11, RNA binding domain DM611_RS03790 PF03946 Ribosomal protein L11, N-terminal domain DM611_RS03795 PF00687 Ribosomal protein L1p/L10e family DM611_RS03805 PF00466 Ribosomal protein L10 DM611_RS03810 PF00542 Ribosomal protein L7/L12 C-terminal domain DM611_RS03810 PF16320 Ribosomal protein L7/L12 dimerisation domain DM611_RS03815 PF04563 RNA polymerase beta subunit DM611_RS03815 PF00562 RNA polymerase Rpb2, domain 6 DM611_RS03815 PF04565 RNA polymerase Rpb2, domain 3 DM611_RS03815 PF10385 RNA polymerase beta subunit external 1 domain DM611_RS03815 PF04560 RNA polymerase Rpb2, domain 7 DM611_RS03815 PF04561 RNA polymerase Rpb2, domain 2 DM611_RS03820 PF04983 RNA polymerase Rpb1, domain 3 DM611_RS03820 PF04997 RNA polymerase Rpb1, domain 1 DM611_RS03820 PF00623 RNA polymerase Rpb1, domain 2 DM611_RS03820 PF04998 RNA polymerase Rpb1, domain 5 DM611_RS03820 PF05000 RNA polymerase Rpb1, domain 4 DM611_RS03825 PF00164 Ribosomal protein S12/S23 DM611_RS03830 PF00177 Ribosomal protein S7p/S5e DM611_RS03835 PF00679 Elongation factor G C-terminus DM611_RS03835 PF03764 Elongation factor G, domain IV DM611_RS03835 PF00009 Elongation factor Tu GTP binding domain DM611_RS03835 PF03144 Elongation factor Tu domain 2 DM611_RS03835 PF14492 Elongation Factor G, domain II DM611_RS03840 PF03143 Elongation factor Tu C-terminal domain DM611_RS03840 PF03144 Elongation factor Tu domain 2 DM611_RS03840 PF00009 Elongation factor Tu GTP binding domain DM611_RS03845 PF00338 Ribosomal protein S10p/S20e DM611_RS03850 PF00297 Ribosomal protein L3 DM611_RS03855 PF00573 Ribosomal protein L4/L1 family DM611_RS03860 PF00276 Ribosomal protein L23 DM611_RS03865 PF00181 Ribosomal Proteins L2, RNA binding domain DM611_RS03865 PF03947 Ribosomal Proteins L2, C-terminal domain DM611_RS03870 PF00203 Ribosomal protein S19 DM611_RS03875 PF00237 Ribosomal protein L22p/L17e DM611_RS03880 PF00189 Ribosomal protein S3, C-terminal domain DM611_RS03880 PF07650 KH domain DM611_RS03885 PF00252 Ribosomal protein L16p/L10e DM611_RS03890 PF00831 Ribosomal L29 protein DM611_RS03895 PF00366 Ribosomal protein S17 DM611_RS03900 PF00238 Ribosomal protein L14p/L23e DM611_RS03905 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DM611_RS03905 PF00467 KOW motif DM611_RS03910 PF00281 Ribosomal protein L5 DM611_RS03910 PF00673 ribosomal L5P family C-terminus DM611_RS03915 PF00253 Ribosomal protein S14p/S29e DM611_RS03920 PF00410 Ribosomal protein S8 DM611_RS03925 PF00347 Ribosomal protein L6 DM611_RS03930 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DM611_RS03935 PF03719 Ribosomal protein S5, C-terminal domain DM611_RS03935 PF00333 Ribosomal protein S5, N-terminal domain DM611_RS03940 PF00327 Ribosomal protein L30p/L7e DM611_RS03945 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DM611_RS03950 PF00344 SecY translocase DM611_RS03955 PF00416 Ribosomal protein S13/S18 DM611_RS03960 PF00411 Ribosomal protein S11 DM611_RS03965 PF01479 S4 domain DM611_RS03965 PF00163 Ribosomal protein S4/S9 N-terminal domain DM611_RS03970 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DM611_RS03970 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DM611_RS03970 PF01000 RNA polymerase Rpb3/RpoA insert domain DM611_RS03975 PF01196 Ribosomal protein L17 DM611_RS03980 PF02600 Disulfide bond formation protein DsbB DM611_RS03990 PF01474 Class-II DAHP synthetase family DM611_RS04005 PF01425 Amidase DM611_RS04015 PF03144 Elongation factor Tu domain 2 DM611_RS04015 PF00009 Elongation factor Tu GTP binding domain DM611_RS04015 PF00679 Elongation factor G C-terminus DM611_RS04025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DM611_RS04030 PF00056 lactate/malate dehydrogenase, NAD binding domain DM611_RS04030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DM611_RS04035 PF00849 RNA pseudouridylate synthase DM611_RS04045 PF16177 Acetyl-coenzyme A synthetase N-terminus DM611_RS04045 PF00501 AMP-binding enzyme DM611_RS04045 PF13193 AMP-binding enzyme C-terminal domain DM611_RS04060 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS04060 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS04070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM611_RS04070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS04080 PF00107 Zinc-binding dehydrogenase DM611_RS04080 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS04085 PF05736 OprF membrane domain DM611_RS04085 PF00691 OmpA family DM611_RS04095 PF01479 S4 domain DM611_RS04095 PF00849 RNA pseudouridylate synthase DM611_RS04105 PF00155 Aminotransferase class I and II DM611_RS04115 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS04115 PF00107 Zinc-binding dehydrogenase DM611_RS04120 PF10459 Peptidase S46 DM611_RS04125 PF00300 Histidine phosphatase superfamily (branch 1) DM611_RS04130 PF02875 Mur ligase family, glutamate ligase domain DM611_RS04130 PF08245 Mur ligase middle domain DM611_RS04145 PF00156 Phosphoribosyl transferase domain DM611_RS04150 PF04305 Protein of unknown function (DUF455) DM611_RS04165 PF00149 Calcineurin-like phosphoesterase DM611_RS04170 PF01569 PAP2 superfamily DM611_RS04175 PF00534 Glycosyl transferases group 1 DM611_RS04175 PF13439 Glycosyltransferase Family 4 DM611_RS04180 PF02541 Ppx/GppA phosphatase family DM611_RS04190 PF13090 Polyphosphate kinase C-terminal domain 2 DM611_RS04190 PF02503 Polyphosphate kinase middle domain DM611_RS04190 PF17941 Polyphosphate kinase C-terminal domain 1 DM611_RS04190 PF13089 Polyphosphate kinase N-terminal domain DM611_RS04195 PF00989 PAS fold DM611_RS04195 PF11808 Phosphate regulon sensor protein PhoR DM611_RS04195 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS04200 PF00072 Response regulator receiver domain DM611_RS04200 PF00486 Transcriptional regulatory protein, C terminal DM611_RS04205 PF13181 Tetratricopeptide repeat DM611_RS04205 PF01435 Peptidase family M48 DM611_RS04210 PF00462 Glutaredoxin DM611_RS04220 PF00180 Isocitrate/isopropylmalate dehydrogenase DM611_RS04230 PF03466 LysR substrate binding domain DM611_RS04230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS04285 PF05697 Bacterial trigger factor protein (TF) DM611_RS04285 PF05698 Bacterial trigger factor protein (TF) C-terminus DM611_RS04290 PF00574 Clp protease DM611_RS04295 PF07724 AAA domain (Cdc48 subfamily) DM611_RS04295 PF10431 C-terminal, D2-small domain, of ClpB protein DM611_RS04295 PF06689 ClpX C4-type zinc finger DM611_RS04300 PF02190 ATP-dependent protease La (LON) substrate-binding domain DM611_RS04300 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS04300 PF05362 Lon protease (S16) C-terminal proteolytic domain DM611_RS04305 PF00216 Bacterial DNA-binding protein DM611_RS04335 PF05698 Bacterial trigger factor protein (TF) C-terminus DM611_RS04340 PF05257 CHAP domain DM611_RS04340 PF01476 LysM domain DM611_RS04345 PF00753 Metallo-beta-lactamase superfamily DM611_RS04345 PF16123 Hydroxyacylglutathione hydrolase C-terminus DM611_RS04355 PF00075 RNase H DM611_RS04360 PF00929 Exonuclease DM611_RS04380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM611_RS04390 PF12706 Beta-lactamase superfamily domain DM611_RS04405 PF00893 Small Multidrug Resistance protein DM611_RS04420 PF12158 Protein of unknown function (DUF3592) DM611_RS04430 PF03527 RHS protein DM611_RS04430 PF05593 RHS Repeat DM611_RS04450 PF01527 Transposase DM611_RS04485 PF13356 Arm DNA-binding domain DM611_RS04485 PF00589 Phage integrase family DM611_RS04500 PF00239 Resolvase, N terminal domain DM611_RS04500 PF02796 Helix-turn-helix domain of resolvase DM611_RS04530 PF02086 D12 class N6 adenine-specific DNA methyltransferase DM611_RS04560 PF12170 DNA polymerase III tau subunit V interacting with alpha DM611_RS04560 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DM611_RS04560 PF12169 DNA polymerase III subunits gamma and tau domain III DM611_RS04565 PF02575 YbaB/EbfC DNA-binding family DM611_RS04570 PF02132 RecR protein DM611_RS04570 PF13662 Toprim domain DM611_RS04575 PF01230 HIT domain DM611_RS04585 PF01841 Transglutaminase-like superfamily DM611_RS04585 PF11992 Domain of unknown function (DUF3488) DM611_RS04585 PF13559 Domain of unknown function (DUF4129) DM611_RS04595 PF07726 ATPase family associated with various cellular activities (AAA) DM611_RS04595 PF17863 AAA lid domain DM611_RS04605 PF02545 Maf-like protein DM611_RS04610 PF02620 Large ribosomal RNA subunit accumulation protein YceD DM611_RS04615 PF01783 Ribosomal L32p protein family DM611_RS04620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DM611_RS04620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM611_RS04630 PF00698 Acyl transferase domain DM611_RS04640 PF00550 Phosphopantetheine attachment site DM611_RS04645 PF02801 Beta-ketoacyl synthase, C-terminal domain DM611_RS04645 PF00109 Beta-ketoacyl synthase, N-terminal domain DM611_RS04650 PF00425 chorismate binding enzyme DM611_RS04650 PF04715 Anthranilate synthase component I, N terminal region DM611_RS04655 PF02618 YceG-like family DM611_RS04660 PF02223 Thymidylate kinase DM611_RS04665 PF09115 DNA polymerase III, delta subunit, C terminal DM611_RS04730 PF04984 Phage tail sheath protein subtilisin-like domain DM611_RS04730 PF17482 Phage tail sheath C-terminal domain DM611_RS04825 PF00593 TonB dependent receptor DM611_RS04825 PF07715 TonB-dependent Receptor Plug Domain DM611_RS04835 PF07690 Major Facilitator Superfamily DM611_RS04840 PF08220 DeoR-like helix-turn-helix domain DM611_RS04840 PF00455 DeoR C terminal sensor domain DM611_RS04845 PF13599 Pentapeptide repeats (9 copies) DM611_RS04850 PF13649 Methyltransferase domain DM611_RS04860 PF03466 LysR substrate binding domain DM611_RS04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS04865 PF00155 Aminotransferase class I and II DM611_RS04865 PF00392 Bacterial regulatory proteins, gntR family DM611_RS04880 PF03466 LysR substrate binding domain DM611_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS04885 PF03466 LysR substrate binding domain DM611_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS04890 PF07690 Major Facilitator Superfamily DM611_RS04895 PF00672 HAMP domain DM611_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS04895 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS04900 PF00072 Response regulator receiver domain DM611_RS04900 PF00486 Transcriptional regulatory protein, C terminal DM611_RS04905 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS04905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS04910 PF00873 AcrB/AcrD/AcrF family DM611_RS04930 PF07690 Major Facilitator Superfamily DM611_RS04935 PF00376 MerR family regulatory protein DM611_RS04935 PF09278 MerR, DNA binding DM611_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS04945 PF03466 LysR substrate binding domain DM611_RS04950 PF03807 NADP oxidoreductase coenzyme F420-dependent DM611_RS04950 PF14748 Pyrroline-5-carboxylate reductase dimerisation DM611_RS04955 PF01168 Alanine racemase, N-terminal domain DM611_RS04960 PF00437 Type II/IV secretion system protein DM611_RS04965 PF00437 Type II/IV secretion system protein DM611_RS04975 PF00248 Aldo/keto reductase family DM611_RS04980 PF03466 LysR substrate binding domain DM611_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS05000 PF03352 Methyladenine glycosylase DM611_RS05005 PF13687 Domain of unknown function (DUF4153) DM611_RS05010 PF02622 Uncharacterized ACR, COG1678 DM611_RS05015 PF03652 Holliday junction resolvase DM611_RS05020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM611_RS05020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM611_RS05045 PF03448 MgtE intracellular N domain DM611_RS05045 PF00571 CBS domain DM611_RS05045 PF01769 Divalent cation transporter DM611_RS05050 PF05524 PEP-utilising enzyme, N-terminal DM611_RS05050 PF00391 PEP-utilising enzyme, mobile domain DM611_RS05050 PF02896 PEP-utilising enzyme, TIM barrel domain DM611_RS05055 PF00381 PTS HPr component phosphorylation site DM611_RS05065 PF03668 P-loop ATPase protein family DM611_RS05070 PF02603 HPr Serine kinase N terminus DM611_RS05070 PF07475 HPr Serine kinase C-terminal domain DM611_RS05075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DM611_RS05080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DM611_RS05085 PF00309 Sigma-54 factor, Activator interacting domain (AID) DM611_RS05085 PF04963 Sigma-54 factor, core binding domain DM611_RS05085 PF04552 Sigma-54, DNA binding domain DM611_RS05090 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM611_RS05090 PF00005 ABC transporter DM611_RS05110 PF01380 SIS domain DM611_RS05110 PF00571 CBS domain DM611_RS05120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM611_RS05140 PF00551 Formyl transferase DM611_RS05160 PF00586 AIR synthase related protein, N-terminal domain DM611_RS05160 PF02769 AIR synthase related protein, C-terminal domain DM611_RS05170 PF01594 AI-2E family transporter DM611_RS05175 PF00308 Bacterial dnaA protein DM611_RS05185 PF00483 Nucleotidyl transferase DM611_RS05190 PF01636 Phosphotransferase enzyme family DM611_RS05195 PF04226 Transglycosylase associated protein DM611_RS05230 PF00667 FAD binding domain DM611_RS05230 PF00175 Oxidoreductase NAD-binding domain DM611_RS05230 PF00258 Flavodoxin DM611_RS05235 PF02424 ApbE family DM611_RS05255 PF07715 TonB-dependent Receptor Plug Domain DM611_RS05255 PF00593 TonB dependent receptor DM611_RS05265 PF13640 2OG-Fe(II) oxygenase superfamily DM611_RS05265 PF18331 PKHD-type hydroxylase C-terminal domain DM611_RS05270 PF07715 TonB-dependent Receptor Plug Domain DM611_RS05270 PF00593 TonB dependent receptor DM611_RS05280 PF00355 Rieske [2Fe-2S] domain DM611_RS05295 PF00266 Aminotransferase class-V DM611_RS05300 PF01458 Uncharacterized protein family (UPF0051) DM611_RS05305 PF00005 ABC transporter DM611_RS05310 PF01458 Uncharacterized protein family (UPF0051) DM611_RS05315 PF02082 Transcriptional regulator DM611_RS05345 PF02566 OsmC-like protein DM611_RS05350 PF02567 Phenazine biosynthesis-like protein DM611_RS05355 PF02567 Phenazine biosynthesis-like protein DM611_RS05360 PF01842 ACT domain DM611_RS05360 PF00696 Amino acid kinase family DM611_RS05370 PF08245 Mur ligase middle domain DM611_RS05370 PF02875 Mur ligase family, glutamate ligase domain DM611_RS05385 PF00348 Polyprenyl synthetase DM611_RS05390 PF00128 Alpha amylase, catalytic domain DM611_RS05400 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DM611_RS05400 PF10566 Glycoside hydrolase 97 DM611_RS05400 PF14508 Glycosyl-hydrolase 97 N-terminal DM611_RS05410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DM611_RS05415 PF00128 Alpha amylase, catalytic domain DM611_RS05415 PF00686 Starch binding domain DM611_RS05445 PF00005 ABC transporter DM611_RS05445 PF13732 Domain of unknown function (DUF4162) DM611_RS05450 PF00356 Bacterial regulatory proteins, lacI family DM611_RS05460 PF00436 Single-strand binding protein family DM611_RS05470 PF05199 GMC oxidoreductase DM611_RS05470 PF00732 GMC oxidoreductase DM611_RS05485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM611_RS05495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM611_RS05495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM611_RS05500 PF03825 Nucleoside H+ symporter DM611_RS05510 PF00356 Bacterial regulatory proteins, lacI family DM611_RS05515 PF00563 EAL domain DM611_RS05515 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS05515 PF03707 Bacterial signalling protein N terminal repeat DM611_RS05540 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS05555 PF03466 LysR substrate binding domain DM611_RS05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS05560 PF12146 Serine aminopeptidase, S33 DM611_RS05565 PF12146 Serine aminopeptidase, S33 DM611_RS05575 PF01022 Bacterial regulatory protein, arsR family DM611_RS05585 PF13443 Cro/C1-type HTH DNA-binding domain DM611_RS05590 PF00571 CBS domain DM611_RS05590 PF03471 Transporter associated domain DM611_RS05590 PF03741 Integral membrane protein TerC family DM611_RS05595 PF10518 TAT (twin-arginine translocation) pathway signal sequence DM611_RS05595 PF00149 Calcineurin-like phosphoesterase DM611_RS05610 PF08946 Osmosensory transporter coiled coil DM611_RS05610 PF00083 Sugar (and other) transporter DM611_RS05615 PF01156 Inosine-uridine preferring nucleoside hydrolase DM611_RS05625 PF07729 FCD domain DM611_RS05625 PF00392 Bacterial regulatory proteins, gntR family DM611_RS05640 PF00698 Acyl transferase domain DM611_RS05645 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DM611_RS05650 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DM611_RS05660 PF01039 Carboxyl transferase domain DM611_RS05665 PF06857 Malonate decarboxylase delta subunit (MdcD) DM611_RS05670 PF16957 Malonate decarboxylase, alpha subunit, transporter DM611_RS05675 PF00593 TonB dependent receptor DM611_RS05675 PF07660 Secretin and TonB N terminus short domain DM611_RS05675 PF07715 TonB-dependent Receptor Plug Domain DM611_RS05680 PF06039 Malate:quinone oxidoreductase (Mqo) DM611_RS05695 PF13673 Acetyltransferase (GNAT) domain DM611_RS05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS05700 PF03466 LysR substrate binding domain DM611_RS05705 PF01810 LysE type translocator DM611_RS05715 PF00854 POT family DM611_RS05720 PF03169 OPT oligopeptide transporter protein DM611_RS05725 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DM611_RS05725 PF07676 WD40-like Beta Propeller Repeat DM611_RS05725 PF00326 Prolyl oligopeptidase family DM611_RS05740 PF03776 Septum formation topological specificity factor MinE DM611_RS05745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM611_RS05750 PF05209 Septum formation inhibitor MinC, N-terminal domain DM611_RS05750 PF03775 Septum formation inhibitor MinC, C-terminal domain DM611_RS05760 PF07730 Histidine kinase DM611_RS05765 PF00196 Bacterial regulatory proteins, luxR family DM611_RS05765 PF00072 Response regulator receiver domain DM611_RS05805 PF02222 ATP-grasp domain DM611_RS05805 PF01370 NAD dependent epimerase/dehydratase family DM611_RS05820 PF04376 Arginine-tRNA-protein transferase, N terminus DM611_RS05820 PF04377 Arginine-tRNA-protein transferase, C terminus DM611_RS05830 PF04542 Sigma-70 region 2 DM611_RS05830 PF08281 Sigma-70, region 4 DM611_RS05845 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS05865 PF17755 UvrA DNA-binding domain DM611_RS05865 PF00005 ABC transporter DM611_RS05865 PF17760 UvrA interaction domain DM611_RS05870 PF00829 Ribosomal prokaryotic L21 protein DM611_RS05875 PF01016 Ribosomal L27 protein DM611_RS05880 PF01926 50S ribosome-binding GTPase DM611_RS05880 PF01018 GTP1/OBG DM611_RS05885 PF01649 Ribosomal protein S20 DM611_RS05890 PF03023 Lipid II flippase MurJ DM611_RS05895 PF01687 Riboflavin kinase DM611_RS05895 PF06574 FAD synthetase DM611_RS05900 PF06827 Zinc finger found in FPG and IleRS DM611_RS05900 PF08264 Anticodon-binding domain of tRNA DM611_RS05900 PF00133 tRNA synthetases class I (I, L, M and V) DM611_RS05905 PF01252 Signal peptidase (SPase) II DM611_RS05910 PF02401 LytB protein DM611_RS05920 PF07947 YhhN family DM611_RS05925 PF07715 TonB-dependent Receptor Plug Domain DM611_RS05925 PF00593 TonB dependent receptor DM611_RS05945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM611_RS05945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM611_RS06025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM611_RS06025 PF06481 COX Aromatic Rich Motif DM611_RS06030 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM611_RS06035 PF00510 Cytochrome c oxidase subunit III DM611_RS06040 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DM611_RS06045 PF03707 Bacterial signalling protein N terminal repeat DM611_RS06045 PF00563 EAL domain DM611_RS06045 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06050 PF18073 Rubredoxin metal binding domain DM611_RS06055 PF00183 Hsp90 protein DM611_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS06075 PF00448 SRP54-type protein, GTPase domain DM611_RS06075 PF02881 SRP54-type protein, helical bundle domain DM611_RS06075 PF02978 Signal peptide binding domain DM611_RS06085 PF03060 Nitronate monooxygenase DM611_RS06095 PF00886 Ribosomal protein S16 DM611_RS06100 PF05239 PRC-barrel domain DM611_RS06100 PF01782 RimM N-terminal domain DM611_RS06105 PF01746 tRNA (Guanine-1)-methyltransferase DM611_RS06110 PF01245 Ribosomal protein L19 DM611_RS06130 PF01554 MatE DM611_RS06140 PF01479 S4 domain DM611_RS06150 PF00199 Catalase DM611_RS06150 PF06628 Catalase-related immune-responsive DM611_RS06155 PF05188 MutS domain II DM611_RS06155 PF05190 MutS family domain IV DM611_RS06155 PF05192 MutS domain III DM611_RS06155 PF00488 MutS domain V DM611_RS06155 PF01624 MutS domain I DM611_RS06175 PF00672 HAMP domain DM611_RS06175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS06180 PF05433 Glycine zipper 2TM domain DM611_RS06195 PF13533 Biotin-lipoyl like DM611_RS06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS06205 PF03466 LysR substrate binding domain DM611_RS06210 PF01810 LysE type translocator DM611_RS06215 PF00557 Metallopeptidase family M24 DM611_RS06240 PF00202 Aminotransferase class-III DM611_RS06250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DM611_RS06255 PF00892 EamA-like transporter family DM611_RS06260 PF00892 EamA-like transporter family DM611_RS06265 PF12146 Serine aminopeptidase, S33 DM611_RS06270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS06270 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS06275 PF00072 Response regulator receiver domain DM611_RS06275 PF00486 Transcriptional regulatory protein, C terminal DM611_RS06285 PF01638 HxlR-like helix-turn-helix DM611_RS06290 PF07690 Major Facilitator Superfamily DM611_RS06295 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06300 PF07715 TonB-dependent Receptor Plug Domain DM611_RS06300 PF00593 TonB dependent receptor DM611_RS06305 PF01545 Cation efflux family DM611_RS06310 PF04493 Endonuclease V DM611_RS06315 PF00300 Histidine phosphatase superfamily (branch 1) DM611_RS06320 PF05649 Peptidase family M13 DM611_RS06320 PF01431 Peptidase family M13 DM611_RS06325 PF01966 HD domain DM611_RS06325 PF00072 Response regulator receiver domain DM611_RS06330 PF17757 UvrB interaction domain DM611_RS06330 PF00271 Helicase conserved C-terminal domain DM611_RS06330 PF00270 DEAD/DEAH box helicase DM611_RS06330 PF02559 CarD-like/TRCF domain DM611_RS06330 PF03461 TRCF domain DM611_RS06340 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DM611_RS06345 PF00072 Response regulator receiver domain DM611_RS06345 PF00486 Transcriptional regulatory protein, C terminal DM611_RS06350 PF00672 HAMP domain DM611_RS06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS06350 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS06355 PF06123 Inner membrane protein CreD DM611_RS06365 PF04389 Peptidase family M28 DM611_RS06365 PF02225 PA domain DM611_RS06370 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM611_RS06375 PF01475 Ferric uptake regulator family DM611_RS06385 PF13533 Biotin-lipoyl like DM611_RS06405 PF00593 TonB dependent receptor DM611_RS06405 PF07715 TonB-dependent Receptor Plug Domain DM611_RS06425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DM611_RS06425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DM611_RS06430 PF12833 Helix-turn-helix domain DM611_RS06430 PF00730 HhH-GPD superfamily base excision DNA repair protein DM611_RS06430 PF06029 AlkA N-terminal domain DM611_RS06430 PF02805 Metal binding domain of Ada DM611_RS06450 PF01494 FAD binding domain DM611_RS06460 PF00270 DEAD/DEAH box helicase DM611_RS06460 PF03880 DbpA RNA binding domain DM611_RS06460 PF00271 Helicase conserved C-terminal domain DM611_RS06465 PF08448 PAS fold DM611_RS06465 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06465 PF00563 EAL domain DM611_RS06470 PF00563 EAL domain DM611_RS06470 PF03707 Bacterial signalling protein N terminal repeat DM611_RS06470 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06475 PF00849 RNA pseudouridylate synthase DM611_RS06475 PF01479 S4 domain DM611_RS06480 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06485 PF02463 RecF/RecN/SMC N terminal domain DM611_RS06505 PF00144 Beta-lactamase DM611_RS06510 PF00005 ABC transporter DM611_RS06510 PF00664 ABC transporter transmembrane region DM611_RS06515 PF00328 Histidine phosphatase superfamily (branch 2) DM611_RS06520 PF05426 Alginate lyase DM611_RS06550 PF03466 LysR substrate binding domain DM611_RS06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS06560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DM611_RS06570 PF03551 Transcriptional regulator PadR-like family DM611_RS06590 PF03653 Uncharacterised protein family (UPF0093) DM611_RS06595 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DM611_RS06605 PF07733 Bacterial DNA polymerase III alpha NTPase domain DM611_RS06605 PF14579 Helix-hairpin-helix motif DM611_RS06605 PF02811 PHP domain DM611_RS06605 PF01336 OB-fold nucleic acid binding domain DM611_RS06605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DM611_RS06610 PF01351 Ribonuclease HII DM611_RS06615 PF02684 Lipid-A-disaccharide synthetase DM611_RS06620 PF00132 Bacterial transferase hexapeptide (six repeats) DM611_RS06620 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DM611_RS06625 PF07977 FabA-like domain DM611_RS06630 PF00132 Bacterial transferase hexapeptide (six repeats) DM611_RS06630 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DM611_RS06635 PF01103 Surface antigen DM611_RS06635 PF07244 Surface antigen variable number repeat DM611_RS06640 PF17820 PDZ domain DM611_RS06640 PF02163 Peptidase family M50 DM611_RS06645 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DM611_RS06645 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DM611_RS06645 PF13288 DXP reductoisomerase C-terminal domain DM611_RS06655 PF01255 Putative undecaprenyl diphosphate synthase DM611_RS06660 PF01765 Ribosome recycling factor DM611_RS06665 PF00696 Amino acid kinase family DM611_RS06670 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06675 PF00889 Elongation factor TS DM611_RS06680 PF00318 Ribosomal protein S2 DM611_RS06700 PF13953 PapC C-terminal domain DM611_RS06700 PF00577 Outer membrane usher protein DM611_RS06700 PF13954 PapC N-terminal domain DM611_RS06715 PF00557 Metallopeptidase family M24 DM611_RS06720 PF08335 GlnD PII-uridylyltransferase DM611_RS06720 PF01909 Nucleotidyltransferase domain DM611_RS06720 PF01966 HD domain DM611_RS06725 PF14602 Hexapeptide repeat of succinyl-transferase DM611_RS06725 PF00132 Bacterial transferase hexapeptide (six repeats) DM611_RS06725 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DM611_RS06735 PF03960 ArsC family DM611_RS06740 PF01546 Peptidase family M20/M25/M40 DM611_RS06740 PF07687 Peptidase dimerisation domain DM611_RS06750 PF00733 Asparagine synthase DM611_RS06750 PF13537 Glutamine amidotransferase domain DM611_RS06755 PF00999 Sodium/hydrogen exchanger family DM611_RS06760 PF01804 Penicillin amidase DM611_RS06765 PF00210 Ferritin-like domain DM611_RS06770 PF00521 DNA gyrase/topoisomerase IV, subunit A DM611_RS06770 PF03989 DNA gyrase C-terminal domain, beta-propeller DM611_RS06775 PF12833 Helix-turn-helix domain DM611_RS06785 PF02321 Outer membrane efflux protein DM611_RS06790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS06790 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS06795 PF07690 Major Facilitator Superfamily DM611_RS06805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS06805 PF03466 LysR substrate binding domain DM611_RS06825 PF08206 Ribonuclease B OB domain DM611_RS06825 PF08461 Ribonuclease R winged-helix domain DM611_RS06825 PF00575 S1 RNA binding domain DM611_RS06825 PF00773 RNB domain DM611_RS06825 PF17876 Cold shock domain DM611_RS06835 PF08032 RNA 2'-O ribose methyltransferase substrate binding DM611_RS06835 PF00588 SpoU rRNA Methylase family DM611_RS06840 PF02321 Outer membrane efflux protein DM611_RS06845 PF00005 ABC transporter DM611_RS06845 PF12704 MacB-like periplasmic core domain DM611_RS06845 PF02687 FtsX-like permease family DM611_RS06850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS06855 PF00486 Transcriptional regulatory protein, C terminal DM611_RS06855 PF00072 Response regulator receiver domain DM611_RS06860 PF00672 HAMP domain DM611_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS06860 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS06865 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS06870 PF00929 Exonuclease DM611_RS06875 PF07681 DoxX DM611_RS06885 PF05114 Protein of unknown function (DUF692) DM611_RS06895 PF01895 PhoU domain DM611_RS06900 PF00005 ABC transporter DM611_RS06905 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS06915 PF12849 PBP superfamily domain DM611_RS06925 PF12849 PBP superfamily domain DM611_RS06935 PF10576 Iron-sulfur binding domain of endonuclease III DM611_RS06935 PF00730 HhH-GPD superfamily base excision DNA repair protein DM611_RS06935 PF00633 Helix-hairpin-helix motif DM611_RS06945 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS06950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DM611_RS06950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM611_RS06955 PF00293 NUDIX domain DM611_RS06960 PF00581 Rhodanese-like domain DM611_RS06975 PF10672 S-adenosylmethionine-dependent methyltransferase DM611_RS06975 PF02926 THUMP domain DM611_RS06975 PF01170 Putative RNA methylase family UPF0020 DM611_RS06995 PF04286 Protein of unknown function (DUF445) DM611_RS07005 PF00202 Aminotransferase class-III DM611_RS07010 PF00171 Aldehyde dehydrogenase family DM611_RS07020 PF00083 Sugar (and other) transporter DM611_RS07020 PF07690 Major Facilitator Superfamily DM611_RS07025 PF01814 Hemerythrin HHE cation binding domain DM611_RS07030 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS07030 PF00072 Response regulator receiver domain DM611_RS07050 PF01266 FAD dependent oxidoreductase DM611_RS07060 PF00120 Glutamine synthetase, catalytic domain DM611_RS07065 PF13416 Bacterial extracellular solute-binding protein DM611_RS07075 PF08402 TOBE domain DM611_RS07075 PF00005 ABC transporter DM611_RS07080 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS07085 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS07090 PF00171 Aldehyde dehydrogenase family DM611_RS07105 PF00571 CBS domain DM611_RS07105 PF03471 Transporter associated domain DM611_RS07120 PF02130 Uncharacterized protein family UPF0054 DM611_RS07125 PF02562 PhoH-like protein DM611_RS07135 PF00005 ABC transporter DM611_RS07145 PF01938 TRAM domain DM611_RS07145 PF00919 Uncharacterized protein family UPF0004 DM611_RS07145 PF04055 Radical SAM superfamily DM611_RS07150 PF13417 Glutathione S-transferase, N-terminal domain DM611_RS07160 PF01464 Transglycosylase SLT domain DM611_RS07165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DM611_RS07165 PF00355 Rieske [2Fe-2S] domain DM611_RS07170 PF00032 Cytochrome b(C-terminal)/b6/petD DM611_RS07170 PF00033 Cytochrome b/b6/petB DM611_RS07175 PF02167 Cytochrome C1 family DM611_RS07180 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS07180 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS07185 PF04386 Stringent starvation protein B DM611_RS07200 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DM611_RS07200 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DM611_RS07210 PF00731 AIR carboxylase DM611_RS07215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DM611_RS07215 PF02222 ATP-grasp domain DM611_RS07220 PF02627 Carboxymuconolactone decarboxylase family DM611_RS07225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DM611_RS07225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DM611_RS07230 PF00462 Glutaredoxin DM611_RS07240 PF00593 TonB dependent receptor DM611_RS07245 PF03641 Possible lysine decarboxylase DM611_RS07245 PF11892 Domain of unknown function (DUF3412) DM611_RS07245 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DM611_RS07270 PF05567 Neisseria PilC beta-propeller domain DM611_RS07290 PF02151 UvrB/uvrC motif DM611_RS07290 PF12344 Ultra-violet resistance protein B DM611_RS07290 PF04851 Type III restriction enzyme, res subunit DM611_RS07290 PF17757 UvrB interaction domain DM611_RS07290 PF00271 Helicase conserved C-terminal domain DM611_RS07315 PF13905 Thioredoxin-like DM611_RS07325 PF06629 MltA-interacting protein MipA DM611_RS07330 PF00072 Response regulator receiver domain DM611_RS07330 PF00486 Transcriptional regulatory protein, C terminal DM611_RS07335 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS07340 PF00753 Metallo-beta-lactamase superfamily DM611_RS07340 PF13567 Domain of unknown function (DUF4131) DM611_RS07340 PF03772 Competence protein DM611_RS07345 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS07355 PF00005 ABC transporter DM611_RS07355 PF00664 ABC transporter transmembrane region DM611_RS07360 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DM611_RS07365 PF02348 Cytidylyltransferase DM611_RS07370 PF01451 Low molecular weight phosphotyrosine protein phosphatase DM611_RS07380 PF08459 UvrC Helix-hairpin-helix N-terminal DM611_RS07380 PF02151 UvrB/uvrC motif DM611_RS07380 PF01541 GIY-YIG catalytic domain DM611_RS07385 PF01066 CDP-alcohol phosphatidyltransferase DM611_RS07405 PF02321 Outer membrane efflux protein DM611_RS07415 PF12704 MacB-like periplasmic core domain DM611_RS07415 PF00005 ABC transporter DM611_RS07415 PF02687 FtsX-like permease family DM611_RS07455 PF13344 Haloacid dehalogenase-like hydrolase DM611_RS07455 PF00293 NUDIX domain DM611_RS07465 PF01613 Flavin reductase like domain DM611_RS07485 PF02525 Flavodoxin-like fold DM611_RS07490 PF03466 LysR substrate binding domain DM611_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS07515 PF12833 Helix-turn-helix domain DM611_RS07515 PF02311 AraC-like ligand binding domain DM611_RS07520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DM611_RS07540 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DM611_RS07540 PF12801 4Fe-4S binding domain DM611_RS07540 PF13746 4Fe-4S dicluster domain DM611_RS07555 PF06969 HemN C-terminal domain DM611_RS07555 PF04055 Radical SAM superfamily DM611_RS07580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DM611_RS07580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DM611_RS07580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DM611_RS07585 PF01645 Conserved region in glutamate synthase DM611_RS07590 PF13673 Acetyltransferase (GNAT) domain DM611_RS07595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DM611_RS07595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS07600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM611_RS07610 PF17773 UPF0176 acylphosphatase like domain DM611_RS07610 PF00581 Rhodanese-like domain DM611_RS07615 PF00296 Luciferase-like monooxygenase DM611_RS07630 PF03471 Transporter associated domain DM611_RS07630 PF01595 Cyclin M transmembrane N-terminal domain DM611_RS07630 PF00571 CBS domain DM611_RS07640 PF01384 Phosphate transporter family DM611_RS07655 PF00986 DNA gyrase B subunit, carboxyl terminus DM611_RS07655 PF00204 DNA gyrase B DM611_RS07655 PF01751 Toprim domain DM611_RS07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS07665 PF06418 CTP synthase N-terminus DM611_RS07665 PF00117 Glutamine amidotransferase class-I DM611_RS07670 PF00793 DAHP synthetase I family DM611_RS07685 PF00113 Enolase, C-terminal TIM barrel domain DM611_RS07685 PF03952 Enolase, N-terminal domain DM611_RS07690 PF04977 Septum formation initiator DM611_RS07695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DM611_RS07700 PF02542 YgbB family DM611_RS07705 PF01142 tRNA pseudouridine synthase D (TruD) DM611_RS07710 PF01713 Smr domain DM611_RS07715 PF01975 Survival protein SurE DM611_RS07730 PF01476 LysM domain DM611_RS07730 PF01551 Peptidase family M23 DM611_RS07740 PF04430 Protein of unknown function (DUF498/DUF598) DM611_RS07745 PF01985 CRS1 / YhbY (CRM) domain DM611_RS07750 PF01728 FtsJ-like methyltransferase DM611_RS07755 PF17862 AAA+ lid domain DM611_RS07755 PF06480 FtsH Extracellular DM611_RS07755 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS07755 PF01434 Peptidase family M41 DM611_RS07765 PF00809 Pterin binding enzyme DM611_RS07775 PF17209 Hfq protein DM611_RS07780 PF01926 50S ribosome-binding GTPase DM611_RS07780 PF13167 GTP-binding GTPase N-terminal DM611_RS07780 PF16360 GTP-binding GTPase Middle Region DM611_RS07785 PF02464 Competence-damaged protein DM611_RS07790 PF03109 ABC1 family DM611_RS07795 PF00717 Peptidase S24-like DM611_RS07795 PF01726 LexA DNA binding domain DM611_RS07800 PF00154 recA bacterial DNA recombination protein DM611_RS07805 PF02631 RecX family DM611_RS07810 PF02272 DHHA1 domain DM611_RS07810 PF01411 tRNA synthetases class II (A) DM611_RS07810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM611_RS07815 PF02599 Global regulator protein family DM611_RS07870 PF04055 Radical SAM superfamily DM611_RS07870 PF13186 Iron-sulfur cluster-binding domain DM611_RS07890 PF00072 Response regulator receiver domain DM611_RS07890 PF02954 Bacterial regulatory protein, Fis family DM611_RS07890 PF00158 Sigma-54 interaction domain DM611_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS07895 PF13426 PAS domain DM611_RS07895 PF00072 Response regulator receiver domain DM611_RS07910 PF05974 Domain of unknown function (DUF892) DM611_RS07915 PF02735 Ku70/Ku80 beta-barrel domain DM611_RS07925 PF01068 ATP dependent DNA ligase domain DM611_RS07925 PF13298 DNA polymerase Ligase (LigD) DM611_RS07925 PF04679 ATP dependent DNA ligase C terminal region DM611_RS07940 PF05974 Domain of unknown function (DUF892) DM611_RS07950 PF00486 Transcriptional regulatory protein, C terminal DM611_RS07950 PF00072 Response regulator receiver domain DM611_RS07970 PF00816 H-NS histone family DM611_RS08015 PF01695 IstB-like ATP binding protein DM611_RS08020 PF00665 Integrase core domain DM611_RS08035 PF17762 HTH domain found in ParB protein DM611_RS08035 PF02195 ParB-like nuclease domain DM611_RS08065 PF00593 TonB dependent receptor DM611_RS08065 PF07660 Secretin and TonB N terminus short domain DM611_RS08065 PF07715 TonB-dependent Receptor Plug Domain DM611_RS08080 PF00480 ROK family DM611_RS08095 PF00456 Transketolase, thiamine diphosphate binding domain DM611_RS08095 PF17831 Pyruvate dehydrogenase E1 component middle domain DM611_RS08120 PF09423 PhoD-like phosphatase DM611_RS08120 PF16655 PhoD-like phosphatase, N-terminal domain DM611_RS08125 PF04185 Phosphoesterase family DM611_RS08125 PF05506 Domain of unknown function (DUF756) DM611_RS08130 PF07715 TonB-dependent Receptor Plug Domain DM611_RS08130 PF00593 TonB dependent receptor DM611_RS08135 PF00691 OmpA family DM611_RS08135 PF04972 BON domain DM611_RS08140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM611_RS08145 PF00034 Cytochrome c DM611_RS08145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM611_RS08155 PF07690 Major Facilitator Superfamily DM611_RS08165 PF07715 TonB-dependent Receptor Plug Domain DM611_RS08165 PF07660 Secretin and TonB N terminus short domain DM611_RS08165 PF00593 TonB dependent receptor DM611_RS08170 PF17954 Quercetinase C-terminal cupin domain DM611_RS08170 PF02678 Pirin DM611_RS08175 PF03466 LysR substrate binding domain DM611_RS08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS08200 PF08543 Phosphomethylpyrimidine kinase DM611_RS08200 PF02581 Thiamine monophosphate synthase DM611_RS08215 PF13638 PIN domain DM611_RS08215 PF02562 PhoH-like protein DM611_RS08220 PF00578 AhpC/TSA family DM611_RS08230 PF00701 Dihydrodipicolinate synthetase family DM611_RS08240 PF11953 Domain of unknown function (DUF3470) DM611_RS08240 PF00037 4Fe-4S binding domain DM611_RS08245 PF00083 Sugar (and other) transporter DM611_RS08255 PF01743 Poly A polymerase head domain DM611_RS08255 PF12626 Polymerase A arginine-rich C-terminus DM611_RS08255 PF12627 Probable RNA and SrmB- binding site of polymerase A DM611_RS08260 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DM611_RS08265 PF02548 Ketopantoate hydroxymethyltransferase DM611_RS08270 PF02569 Pantoate-beta-alanine ligase DM611_RS08280 PF02261 Aspartate decarboxylase DM611_RS08285 PF00342 Phosphoglucose isomerase DM611_RS08290 PF02954 Bacterial regulatory protein, Fis family DM611_RS08290 PF00072 Response regulator receiver domain DM611_RS08295 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS08300 PF04551 GcpE protein DM611_RS08305 PF01569 PAP2 superfamily DM611_RS08310 PF00072 Response regulator receiver domain DM611_RS08310 PF00196 Bacterial regulatory proteins, luxR family DM611_RS08315 PF01081 KDPG and KHG aldolase DM611_RS08320 PF00665 Integrase core domain DM611_RS08320 PF13333 Integrase core domain DM611_RS08320 PF13276 HTH-like domain DM611_RS08325 PF00920 Dehydratase family DM611_RS08330 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DM611_RS08335 PF02685 Glucokinase DM611_RS08340 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DM611_RS08340 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DM611_RS08345 PF00005 ABC transporter DM611_RS08345 PF17912 MalK OB fold domain DM611_RS08360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DM611_RS08365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DM611_RS08370 PF00890 FAD binding domain DM611_RS08370 PF02910 Fumarate reductase flavoprotein C-term DM611_RS08375 PF13085 2Fe-2S iron-sulfur cluster binding domain DM611_RS08375 PF13237 4Fe-4S dicluster domain DM611_RS08380 PF03937 Flavinator of succinate dehydrogenase DM611_RS08390 PF12704 MacB-like periplasmic core domain DM611_RS08390 PF02687 FtsX-like permease family DM611_RS08395 PF00005 ABC transporter DM611_RS08405 PF04362 Bacterial Fe(2+) trafficking DM611_RS08410 PF00730 HhH-GPD superfamily base excision DNA repair protein DM611_RS08410 PF00633 Helix-hairpin-helix motif DM611_RS08410 PF14815 NUDIX domain DM611_RS08415 PF00448 SRP54-type protein, GTPase domain DM611_RS08415 PF02881 SRP54-type protein, helical bundle domain DM611_RS08425 PF00183 Hsp90 protein DM611_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS08435 PF01467 Cytidylyltransferase-like DM611_RS08445 PF00037 4Fe-4S binding domain DM611_RS08455 PF00753 Metallo-beta-lactamase superfamily DM611_RS08495 PF00719 Inorganic pyrophosphatase DM611_RS08500 PF03441 FAD binding domain of DNA photolyase DM611_RS08500 PF00875 DNA photolyase DM611_RS08505 PF00691 OmpA family DM611_RS08505 PF13488 Glycine zipper DM611_RS08510 PF03466 LysR substrate binding domain DM611_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS08525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS08530 PF00873 AcrB/AcrD/AcrF family DM611_RS08535 PF00106 short chain dehydrogenase DM611_RS08540 PF02321 Outer membrane efflux protein DM611_RS08550 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DM611_RS08550 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS08550 PF13296 Putative type VI secretion system Rhs element Vgr DM611_RS08570 PF03472 Autoinducer binding domain DM611_RS08570 PF00196 Bacterial regulatory proteins, luxR family DM611_RS08600 PF00376 MerR family regulatory protein DM611_RS08600 PF09278 MerR, DNA binding DM611_RS08605 PF07690 Major Facilitator Superfamily DM611_RS08610 PF04151 Bacterial pre-peptidase C-terminal domain DM611_RS08610 PF00082 Subtilase family DM611_RS08620 PF00664 ABC transporter transmembrane region DM611_RS08620 PF03412 Peptidase C39 family DM611_RS08620 PF00005 ABC transporter DM611_RS08655 PF03389 MobA/MobL family DM611_RS08815 PF01668 SmpB protein DM611_RS08820 PF03364 Polyketide cyclase / dehydrase and lipid transport DM611_RS08825 PF03658 RnfH family Ubiquitin DM611_RS08830 PF04355 SmpA / OmlA family DM611_RS08835 PF01475 Ferric uptake regulator family DM611_RS08845 PF03466 LysR substrate binding domain DM611_RS08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS08850 PF02463 RecF/RecN/SMC N terminal domain DM611_RS08855 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DM611_RS08855 PF01628 HrcA protein C terminal domain DM611_RS08860 PF01025 GrpE DM611_RS08865 PF00012 Hsp70 protein DM611_RS08870 PF01556 DnaJ C terminal domain DM611_RS08870 PF00684 DnaJ central domain DM611_RS08870 PF00226 DnaJ domain DM611_RS08875 PF12833 Helix-turn-helix domain DM611_RS08875 PF02311 AraC-like ligand binding domain DM611_RS08880 PF07690 Major Facilitator Superfamily DM611_RS08885 PF08543 Phosphomethylpyrimidine kinase DM611_RS08900 PF00664 ABC transporter transmembrane region DM611_RS08900 PF00005 ABC transporter DM611_RS08905 PF01205 Uncharacterized protein family UPF0029 DM611_RS08915 PF04542 Sigma-70 region 2 DM611_RS08915 PF04545 Sigma-70, region 4 DM611_RS08920 PF00563 EAL domain DM611_RS08920 PF13185 GAF domain DM611_RS08920 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS08925 PF03641 Possible lysine decarboxylase DM611_RS08930 PF00202 Aminotransferase class-III DM611_RS08935 PF02547 Queuosine biosynthesis protein DM611_RS08945 PF01702 Queuine tRNA-ribosyltransferase DM611_RS08950 PF02699 Preprotein translocase subunit DM611_RS08955 PF13721 SecD export protein N-terminal TM region DM611_RS08955 PF07549 SecD/SecF GG Motif DM611_RS08955 PF02355 Protein export membrane protein DM611_RS08960 PF07549 SecD/SecF GG Motif DM611_RS08960 PF02355 Protein export membrane protein DM611_RS08965 PF12241 Trans-2-enoyl-CoA reductase catalytic region DM611_RS08965 PF07055 Enoyl reductase FAD binding domain DM611_RS08965 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DM611_RS08970 PF00563 EAL domain DM611_RS08970 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS08970 PF00072 Response regulator receiver domain DM611_RS08980 PF07152 YaeQ protein DM611_RS08985 PF00849 RNA pseudouridylate synthase DM611_RS08990 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DM611_RS08995 PF00313 'Cold-shock' DNA-binding domain DM611_RS09000 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS09005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DM611_RS09010 PF00156 Phosphoribosyl transferase domain DM611_RS09015 PF00271 Helicase conserved C-terminal domain DM611_RS09015 PF00270 DEAD/DEAH box helicase DM611_RS09015 PF03880 DbpA RNA binding domain DM611_RS09020 PF03601 Conserved hypothetical protein 698 DM611_RS09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS09025 PF03466 LysR substrate binding domain DM611_RS09030 PF16326 ABC transporter C-terminal domain DM611_RS09030 PF12848 ABC transporter DM611_RS09030 PF00005 ABC transporter DM611_RS09035 PF00034 Cytochrome c DM611_RS09045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS09050 PF00873 AcrB/AcrD/AcrF family DM611_RS09055 PF00873 AcrB/AcrD/AcrF family DM611_RS09070 PF00795 Carbon-nitrogen hydrolase DM611_RS09075 PF04371 Porphyromonas-type peptidyl-arginine deiminase DM611_RS09085 PF00444 Ribosomal protein L36 DM611_RS09090 PF02224 Cytidylate kinase DM611_RS09095 PF00575 S1 RNA binding domain DM611_RS09100 PF00216 Bacterial DNA-binding protein DM611_RS09110 PF18073 Rubredoxin metal binding domain DM611_RS09115 PF00953 Glycosyl transferase family 4 DM611_RS09120 PF02719 Polysaccharide biosynthesis protein DM611_RS09125 PF00483 Nucleotidyl transferase DM611_RS09130 PF02803 Thiolase, C-terminal domain DM611_RS09130 PF00108 Thiolase, N-terminal domain DM611_RS09135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM611_RS09135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM611_RS09135 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS09145 PF00334 Nucleoside diphosphate kinase DM611_RS09150 PF04055 Radical SAM superfamily DM611_RS09160 PF13464 Domain of unknown function (DUF4115) DM611_RS09170 PF13360 PQQ-like domain DM611_RS09170 PF01011 PQQ enzyme repeat DM611_RS09175 PF01926 50S ribosome-binding GTPase DM611_RS09175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DM611_RS09180 PF01425 Amidase DM611_RS09200 PF00899 ThiF family DM611_RS09205 PF02254 TrkA-N domain DM611_RS09205 PF00999 Sodium/hydrogen exchanger family DM611_RS09210 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DM611_RS09210 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DM611_RS09215 PF00478 IMP dehydrogenase / GMP reductase domain DM611_RS09215 PF00571 CBS domain DM611_RS09225 PF00117 Glutamine amidotransferase class-I DM611_RS09225 PF00958 GMP synthase C terminal domain DM611_RS09225 PF02540 NAD synthase DM611_RS09235 PF02384 N-6 DNA Methylase DM611_RS09240 PF01420 Type I restriction modification DNA specificity domain DM611_RS09245 PF11867 Domain of unknown function (DUF3387) DM611_RS09245 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DM611_RS09245 PF18766 SWI2/SNF2 ATPase DM611_RS09280 PF00106 short chain dehydrogenase DM611_RS09305 PF01022 Bacterial regulatory protein, arsR family DM611_RS09320 PF06100 MCRA family DM611_RS09330 PF01965 DJ-1/PfpI family DM611_RS09335 PF00593 TonB dependent receptor DM611_RS09335 PF07715 TonB-dependent Receptor Plug Domain DM611_RS09340 PF03358 NADPH-dependent FMN reductase DM611_RS09350 PF00296 Luciferase-like monooxygenase DM611_RS09355 PF00296 Luciferase-like monooxygenase DM611_RS09360 PF01546 Peptidase family M20/M25/M40 DM611_RS09360 PF07687 Peptidase dimerisation domain DM611_RS09365 PF00583 Acetyltransferase (GNAT) family DM611_RS09370 PF00005 ABC transporter DM611_RS09375 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM611_RS09385 PF03466 LysR substrate binding domain DM611_RS09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS09390 PF02525 Flavodoxin-like fold DM611_RS09400 PF12706 Beta-lactamase superfamily domain DM611_RS09405 PF08361 MAATS-type transcriptional repressor, C-terminal region DM611_RS09405 PF00440 Bacterial regulatory proteins, tetR family DM611_RS09410 PF12792 CSS motif domain associated with EAL DM611_RS09410 PF00563 EAL domain DM611_RS09415 PF03466 LysR substrate binding domain DM611_RS09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS09420 PF07690 Major Facilitator Superfamily DM611_RS09425 PF00106 short chain dehydrogenase DM611_RS09435 PF00581 Rhodanese-like domain DM611_RS09445 PF01636 Phosphotransferase enzyme family DM611_RS09455 PF17932 Tetracyclin repressor-like, C-terminal domain DM611_RS09455 PF00440 Bacterial regulatory proteins, tetR family DM611_RS09470 PF00892 EamA-like transporter family DM611_RS09475 PF01565 FAD binding domain DM611_RS09475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DM611_RS09480 PF01180 Dihydroorotate dehydrogenase DM611_RS09500 PF00171 Aldehyde dehydrogenase family DM611_RS09505 PF02397 Bacterial sugar transferase DM611_RS09510 PF01451 Low molecular weight phosphotyrosine protein phosphatase DM611_RS09515 PF13614 AAA domain DM611_RS09515 PF13807 G-rich domain on putative tyrosine kinase DM611_RS09515 PF02706 Chain length determinant protein DM611_RS09520 PF01370 NAD dependent epimerase/dehydratase family DM611_RS09545 PF00793 DAHP synthetase I family DM611_RS09555 PF01380 SIS domain DM611_RS09555 PF00571 CBS domain DM611_RS09570 PF06082 Exopolysaccharide biosynthesis protein YbjH DM611_RS09585 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DM611_RS09585 PF02563 Polysaccharide biosynthesis/export protein DM611_RS09585 PF10531 SLBB domain DM611_RS09595 PF01569 PAP2 superfamily DM611_RS09610 PF01757 Acyltransferase family DM611_RS09625 PF00701 Dihydrodipicolinate synthetase family DM611_RS09655 PF00486 Transcriptional regulatory protein, C terminal DM611_RS09655 PF00072 Response regulator receiver domain DM611_RS09660 PF00072 Response regulator receiver domain DM611_RS09660 PF13426 PAS domain DM611_RS09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS09665 PF00072 Response regulator receiver domain DM611_RS09665 PF00672 HAMP domain DM611_RS09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS09665 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS09665 PF01627 Hpt domain DM611_RS09665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DM611_RS09670 PF01739 CheR methyltransferase, SAM binding domain DM611_RS09670 PF03705 CheR methyltransferase, all-alpha domain DM611_RS09675 PF01339 CheB methylesterase DM611_RS09680 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS09680 PF00989 PAS fold DM611_RS09680 PF18698 Histidine kinase sensor domain DM611_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS09680 PF00672 HAMP domain DM611_RS09690 PF01022 Bacterial regulatory protein, arsR family DM611_RS09715 PF02311 AraC-like ligand binding domain DM611_RS09715 PF12833 Helix-turn-helix domain DM611_RS09725 PF03447 Homoserine dehydrogenase, NAD binding domain DM611_RS09725 PF00742 Homoserine dehydrogenase DM611_RS09725 PF00696 Amino acid kinase family DM611_RS09725 PF01842 ACT domain DM611_RS09725 PF13840 ACT domain DM611_RS09730 PF00288 GHMP kinases N terminal domain DM611_RS09730 PF08544 GHMP kinases C terminal DM611_RS09735 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS09735 PF14821 Threonine synthase N terminus DM611_RS09740 PF13545 Crp-like helix-turn-helix domain DM611_RS09740 PF00027 Cyclic nucleotide-binding domain DM611_RS09745 PF03129 Anticodon binding domain DM611_RS09745 PF13393 Histidyl-tRNA synthetase DM611_RS09760 PF01634 ATP phosphoribosyltransferase DM611_RS09760 PF08029 HisG, C-terminal domain DM611_RS09765 PF00815 Histidinol dehydrogenase DM611_RS09770 PF00155 Aminotransferase class I and II DM611_RS09775 PF08645 Polynucleotide kinase 3 phosphatase DM611_RS09775 PF00475 Imidazoleglycerol-phosphate dehydratase DM611_RS09780 PF00117 Glutamine amidotransferase class-I DM611_RS09785 PF00977 Histidine biosynthesis protein DM611_RS09790 PF00977 Histidine biosynthesis protein DM611_RS09795 PF01502 Phosphoribosyl-AMP cyclohydrolase DM611_RS09795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DM611_RS09810 PF02685 Glucokinase DM611_RS09815 PF01112 Asparaginase DM611_RS09820 PF03932 CutC family DM611_RS09825 PF07715 TonB-dependent Receptor Plug Domain DM611_RS09825 PF00593 TonB dependent receptor DM611_RS09830 PF00403 Heavy-metal-associated domain DM611_RS09835 PF09278 MerR, DNA binding DM611_RS09835 PF00376 MerR family regulatory protein DM611_RS09855 PF07971 Glycosyl hydrolase family 92 DM611_RS09855 PF17678 Glycosyl hydrolase family 92 N-terminal domain DM611_RS09860 PF00356 Bacterial regulatory proteins, lacI family DM611_RS09865 PF07690 Major Facilitator Superfamily DM611_RS09870 PF00294 pfkB family carbohydrate kinase DM611_RS09890 PF03079 ARD/ARD' family DM611_RS09895 PF00596 Class II Aldolase and Adducin N-terminal domain DM611_RS09905 PF13520 Amino acid permease DM611_RS09910 PF13520 Amino acid permease DM611_RS09920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM611_RS09920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM611_RS09925 PF02913 FAD linked oxidases, C-terminal domain DM611_RS09925 PF01565 FAD binding domain DM611_RS09940 PF00672 HAMP domain DM611_RS09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS09940 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS09945 PF00072 Response regulator receiver domain DM611_RS09945 PF00486 Transcriptional regulatory protein, C terminal DM611_RS09950 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS09950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS09955 PF00873 AcrB/AcrD/AcrF family DM611_RS09970 PF08207 Elongation factor P (EF-P) KOW-like domain DM611_RS09970 PF01132 Elongation factor P (EF-P) OB domain DM611_RS09970 PF09285 Elongation factor P, C-terminal DM611_RS09975 PF00106 short chain dehydrogenase DM611_RS09980 PF00682 HMGL-like DM611_RS09990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM611_RS09990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM611_RS09990 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS10000 PF07670 Nucleoside recognition DM611_RS10000 PF07664 Ferrous iron transport protein B C terminus DM611_RS10000 PF02421 Ferrous iron transport protein B DM611_RS10015 PF02525 Flavodoxin-like fold DM611_RS10025 PF00106 short chain dehydrogenase DM611_RS10030 PF05173 Dihydrodipicolinate reductase, C-terminus DM611_RS10030 PF01113 Dihydrodipicolinate reductase, N-terminus DM611_RS10035 PF00117 Glutamine amidotransferase class-I DM611_RS10035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DM611_RS10040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM611_RS10040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DM611_RS10040 PF02142 MGS-like domain DM611_RS10045 PF01272 Transcription elongation factor, GreA/GreB, C-term DM611_RS10045 PF03449 Transcription elongation factor, N-terminal DM611_RS10055 PF01368 DHH family DM611_RS10055 PF02272 DHHA1 domain DM611_RS10055 PF17768 RecJ OB domain DM611_RS10065 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS10075 PF03527 RHS protein DM611_RS10075 PF14220 Domain of unknown function (DUF4329) DM611_RS10075 PF05593 RHS Repeat DM611_RS10105 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) DM611_RS10120 PF04397 LytTr DNA-binding domain DM611_RS10120 PF00072 Response regulator receiver domain DM611_RS10125 PF01435 Peptidase family M48 DM611_RS10140 PF00171 Aldehyde dehydrogenase family DM611_RS10145 PF00205 Thiamine pyrophosphate enzyme, central domain DM611_RS10145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM611_RS10145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM611_RS10150 PF00152 tRNA synthetases class II (D, K and N) DM611_RS10150 PF01336 OB-fold nucleic acid binding domain DM611_RS10155 PF00072 Response regulator receiver domain DM611_RS10160 PF01627 Hpt domain DM611_RS10160 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS10160 PF00072 Response regulator receiver domain DM611_RS10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10165 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS10170 PF13193 AMP-binding enzyme C-terminal domain DM611_RS10170 PF00501 AMP-binding enzyme DM611_RS10175 PF05199 GMC oxidoreductase DM611_RS10175 PF00732 GMC oxidoreductase DM611_RS10180 PF00171 Aldehyde dehydrogenase family DM611_RS10185 PF00440 Bacterial regulatory proteins, tetR family DM611_RS10185 PF13977 BetI-type transcriptional repressor, C-terminal DM611_RS10190 PF02028 BCCT, betaine/carnitine/choline family transporter DM611_RS10200 PF00694 Aconitase C-terminal domain DM611_RS10200 PF00330 Aconitase family (aconitate hydratase) DM611_RS10215 PF11791 Aconitate B N-terminal domain DM611_RS10215 PF00330 Aconitase family (aconitate hydratase) DM611_RS10215 PF06434 Aconitate hydratase 2 N-terminus DM611_RS10225 PF17761 DUF1016 N-terminal domain DM611_RS10225 PF06250 YhcG PDDEXK nuclease domain DM611_RS10255 PF01339 CheB methylesterase DM611_RS10255 PF00072 Response regulator receiver domain DM611_RS10260 PF03975 CheD chemotactic sensory transduction DM611_RS10265 PF03705 CheR methyltransferase, all-alpha domain DM611_RS10265 PF01739 CheR methyltransferase, SAM binding domain DM611_RS10270 PF02203 Tar ligand binding domain homologue DM611_RS10270 PF00672 HAMP domain DM611_RS10270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS10275 PF02203 Tar ligand binding domain homologue DM611_RS10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS10275 PF00672 HAMP domain DM611_RS10285 PF01584 CheW-like domain DM611_RS10290 PF07317 Flagellar regulator YcgR DM611_RS10290 PF07238 PilZ domain DM611_RS10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS10295 PF02203 Tar ligand binding domain homologue DM611_RS10295 PF00672 HAMP domain DM611_RS10300 PF02895 Signal transducing histidine kinase, homodimeric domain DM611_RS10300 PF09078 CheY binding DM611_RS10300 PF01584 CheW-like domain DM611_RS10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10300 PF01627 Hpt domain DM611_RS10305 PF00072 Response regulator receiver domain DM611_RS10315 PF01584 CheW-like domain DM611_RS10320 PF13614 AAA domain DM611_RS10325 PF00691 OmpA family DM611_RS10325 PF13677 Membrane MotB of proton-channel complex MotA/MotB DM611_RS10330 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS10335 PF01627 Hpt domain DM611_RS10335 PF01584 CheW-like domain DM611_RS10335 PF00072 Response regulator receiver domain DM611_RS10335 PF02895 Signal transducing histidine kinase, homodimeric domain DM611_RS10335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10340 PF04344 Chemotaxis phosphatase, CheZ DM611_RS10345 PF00072 Response regulator receiver domain DM611_RS10350 PF04542 Sigma-70 region 2 DM611_RS10350 PF04539 Sigma-70 region 3 DM611_RS10350 PF04545 Sigma-70, region 4 DM611_RS10355 PF10609 NUBPL iron-transfer P-loop NTPase DM611_RS10360 PF00448 SRP54-type protein, GTPase domain DM611_RS10365 PF00771 FHIPEP family DM611_RS10370 PF01312 FlhB HrpN YscU SpaS Family DM611_RS10375 PF00563 EAL domain DM611_RS10375 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS10375 PF03707 Bacterial signalling protein N terminal repeat DM611_RS10380 PF01311 Bacterial export proteins, family 1 DM611_RS10385 PF01313 Bacterial export proteins, family 3 DM611_RS10390 PF00813 FliP family DM611_RS10395 PF04347 Flagellar biosynthesis protein, FliO DM611_RS10400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DM611_RS10405 PF02154 Flagellar motor switch protein FliM DM611_RS10405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DM611_RS10425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM611_RS10425 PF18269 T3SS EscN ATPase C-terminal domain DM611_RS10435 PF14841 FliG middle domain DM611_RS10435 PF01706 FliG C-terminal domain DM611_RS10435 PF14842 FliG N-terminal domain DM611_RS10440 PF08345 Flagellar M-ring protein C-terminal DM611_RS10440 PF01514 Secretory protein of YscJ/FliF family DM611_RS10445 PF02049 Flagellar hook-basal body complex protein FliE DM611_RS10460 PF06490 Flagellar regulatory protein FleQ DM611_RS10460 PF02954 Bacterial regulatory protein, Fis family DM611_RS10460 PF00158 Sigma-54 interaction domain DM611_RS10465 PF00072 Response regulator receiver domain DM611_RS10465 PF00196 Bacterial regulatory proteins, luxR family DM611_RS10470 PF04552 Sigma-54, DNA binding domain DM611_RS10470 PF04963 Sigma-54 factor, core binding domain DM611_RS10470 PF00309 Sigma-54 factor, Activator interacting domain (AID) DM611_RS10475 PF00072 Response regulator receiver domain DM611_RS10475 PF00196 Bacterial regulatory proteins, luxR family DM611_RS10490 PF02561 Flagellar protein FliS DM611_RS10495 PF07196 Flagellin hook IN motif DM611_RS10495 PF07195 Flagellar hook-associated protein 2 C-terminus DM611_RS10495 PF02465 Flagellar hook-associated protein 2 N-terminus DM611_RS10500 PF00700 Bacterial flagellin C-terminal helical region DM611_RS10500 PF00669 Bacterial flagellin N-terminal helical region DM611_RS10505 PF00669 Bacterial flagellin N-terminal helical region DM611_RS10505 PF00700 Bacterial flagellin C-terminal helical region DM611_RS10510 PF00669 Bacterial flagellin N-terminal helical region DM611_RS10510 PF00700 Bacterial flagellin C-terminal helical region DM611_RS10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM611_RS10520 PF00460 Flagella basal body rod protein DM611_RS10525 PF10135 Rod binding protein DM611_RS10525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DM611_RS10530 PF02119 Flagellar P-ring protein DM611_RS10535 PF02107 Flagellar L-ring protein DM611_RS10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM611_RS10540 PF00460 Flagella basal body rod protein DM611_RS10545 PF00460 Flagella basal body rod protein DM611_RS10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM611_RS10550 PF07559 Flagellar basal body protein FlaE DM611_RS10550 PF00460 Flagella basal body rod protein DM611_RS10550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM611_RS10555 PF03963 Flagellar hook capping protein - N-terminal region DM611_RS10560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM611_RS10560 PF00460 Flagella basal body rod protein DM611_RS10565 PF00460 Flagella basal body rod protein DM611_RS10570 PF01584 CheW-like domain DM611_RS10570 PF00072 Response regulator receiver domain DM611_RS10590 PF00989 PAS fold DM611_RS10590 PF13426 PAS domain DM611_RS10590 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10590 PF13188 PAS domain DM611_RS10595 PF03707 Bacterial signalling protein N terminal repeat DM611_RS10595 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS10595 PF00563 EAL domain DM611_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10600 PF07730 Histidine kinase DM611_RS10605 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS10605 PF00563 EAL domain DM611_RS10605 PF03707 Bacterial signalling protein N terminal repeat DM611_RS10625 PF00672 HAMP domain DM611_RS10625 PF12729 Four helix bundle sensory module for signal transduction DM611_RS10625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS10630 PF04356 Protein of unknown function (DUF489) DM611_RS10640 PF00293 NUDIX domain DM611_RS10650 PF02617 ATP-dependent Clp protease adaptor protein ClpS DM611_RS10655 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DM611_RS10660 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS10660 PF07724 AAA domain (Cdc48 subfamily) DM611_RS10660 PF17871 AAA lid domain DM611_RS10660 PF02861 Clp amino terminal domain, pathogenicity island component DM611_RS10660 PF10431 C-terminal, D2-small domain, of ClpB protein DM611_RS10675 PF01176 Translation initiation factor 1A / IF-1 DM611_RS10680 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DM611_RS10695 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS10700 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM611_RS10700 PF09397 Ftsk gamma domain DM611_RS10700 PF01580 FtsK/SpoIIIE family DM611_RS10700 PF17854 FtsK alpha domain DM611_RS10710 PF03548 Outer membrane lipoprotein carrier protein LolA DM611_RS10715 PF16193 AAA C-terminal domain DM611_RS10715 PF12002 MgsA AAA+ ATPase C terminal DM611_RS10715 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS10735 PF00756 Putative esterase DM611_RS10745 PF01497 Periplasmic binding protein DM611_RS10750 PF01032 FecCD transport family DM611_RS10755 PF00005 ABC transporter DM611_RS10770 PF03144 Elongation factor Tu domain 2 DM611_RS10770 PF00009 Elongation factor Tu GTP binding domain DM611_RS10770 PF03764 Elongation factor G, domain IV DM611_RS10770 PF14492 Elongation Factor G, domain II DM611_RS10770 PF00679 Elongation factor G C-terminus DM611_RS10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10785 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS10785 PF01627 Hpt domain DM611_RS10785 PF00072 Response regulator receiver domain DM611_RS10785 PF00672 HAMP domain DM611_RS10800 PF00144 Beta-lactamase DM611_RS10810 PF00005 ABC transporter DM611_RS10810 PF02687 FtsX-like permease family DM611_RS10810 PF12704 MacB-like periplasmic core domain DM611_RS10815 PF00005 ABC transporter DM611_RS10815 PF02687 FtsX-like permease family DM611_RS10815 PF12704 MacB-like periplasmic core domain DM611_RS10860 PF01593 Flavin containing amine oxidoreductase DM611_RS10875 PF04542 Sigma-70 region 2 DM611_RS10875 PF08281 Sigma-70, region 4 DM611_RS10890 PF13188 PAS domain DM611_RS10890 PF00072 Response regulator receiver domain DM611_RS10890 PF08448 PAS fold DM611_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10890 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS10895 PF00072 Response regulator receiver domain DM611_RS10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS10900 PF01590 GAF domain DM611_RS10900 PF08446 PAS fold DM611_RS10900 PF00360 Phytochrome region DM611_RS10900 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS10910 PF03073 TspO/MBR family DM611_RS10920 PF12146 Serine aminopeptidase, S33 DM611_RS10925 PF00106 short chain dehydrogenase DM611_RS10935 PF12833 Helix-turn-helix domain DM611_RS10935 PF12852 Cupin DM611_RS10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS10940 PF03466 LysR substrate binding domain DM611_RS10945 PF12146 Serine aminopeptidase, S33 DM611_RS10950 PF00107 Zinc-binding dehydrogenase DM611_RS10950 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS10955 PF01494 FAD binding domain DM611_RS10965 PF00106 short chain dehydrogenase DM611_RS10970 PF16193 AAA C-terminal domain DM611_RS10970 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS10970 PF12002 MgsA AAA+ ATPase C terminal DM611_RS10975 PF00106 short chain dehydrogenase DM611_RS10980 PF12852 Cupin DM611_RS10980 PF12833 Helix-turn-helix domain DM611_RS11000 PF13533 Biotin-lipoyl like DM611_RS11010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS11020 PF00583 Acetyltransferase (GNAT) family DM611_RS11025 PF02525 Flavodoxin-like fold DM611_RS11030 PF07681 DoxX DM611_RS11035 PF03466 LysR substrate binding domain DM611_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS11040 PF05726 Pirin C-terminal cupin domain DM611_RS11040 PF02678 Pirin DM611_RS11175 PF05857 TraX protein DM611_RS11220 PF00753 Metallo-beta-lactamase superfamily DM611_RS11220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DM611_RS11220 PF10996 Beta-Casp domain DM611_RS11255 PF00753 Metallo-beta-lactamase superfamily DM611_RS11260 PF04143 Sulphur transport DM611_RS11275 PF01925 Sulfite exporter TauE/SafE DM611_RS11285 PF03960 ArsC family DM611_RS11290 PF03358 NADPH-dependent FMN reductase DM611_RS11315 PF12849 PBP superfamily domain DM611_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS11330 PF00005 ABC transporter DM611_RS11335 PF01895 PhoU domain DM611_RS11350 PF02810 SEC-C motif DM611_RS11350 PF07516 SecA Wing and Scaffold domain DM611_RS11350 PF01043 SecA preprotein cross-linking domain DM611_RS11350 PF07517 SecA DEAD-like domain DM611_RS11375 PF00873 AcrB/AcrD/AcrF family DM611_RS11410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM611_RS11410 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS11415 PF01252 Signal peptidase (SPase) II DM611_RS11430 PF00873 AcrB/AcrD/AcrF family DM611_RS11435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS11450 PF00403 Heavy-metal-associated domain DM611_RS11455 PF03239 Iron permease FTR1 family DM611_RS11460 PF00376 MerR family regulatory protein DM611_RS11460 PF09278 MerR, DNA binding DM611_RS11465 PF00795 Carbon-nitrogen hydrolase DM611_RS11465 PF02540 NAD synthase DM611_RS11475 PF01526 Tn3 transposase DDE domain DM611_RS11475 PF13700 Domain of unknown function (DUF4158) DM611_RS11490 PF02411 MerT mercuric transport protein DM611_RS11495 PF00376 MerR family regulatory protein DM611_RS11495 PF09278 MerR, DNA binding DM611_RS11505 PF00491 Arginase family DM611_RS11520 PF04945 YHS domain DM611_RS11525 PF05425 Copper resistance protein D DM611_RS11555 PF05275 Copper resistance protein B precursor (CopB) DM611_RS11560 PF07732 Multicopper oxidase DM611_RS11560 PF00394 Multicopper oxidase DM611_RS11560 PF07731 Multicopper oxidase DM611_RS11615 PF00107 Zinc-binding dehydrogenase DM611_RS11615 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS11625 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DM611_RS11640 PF02625 XdhC and CoxI family DM611_RS11640 PF13478 XdhC Rossmann domain DM611_RS11685 PF10137 Predicted nucleotide-binding protein containing TIR-like domain DM611_RS11730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM611_RS11730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM611_RS11735 PF00941 FAD binding domain in molybdopterin dehydrogenase DM611_RS11735 PF03450 CO dehydrogenase flavoprotein C-terminal domain DM611_RS11740 PF00111 2Fe-2S iron-sulfur cluster binding domain DM611_RS11740 PF01799 [2Fe-2S] binding domain DM611_RS11740 PF10518 TAT (twin-arginine translocation) pathway signal sequence DM611_RS11745 PF02566 OsmC-like protein DM611_RS11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS11755 PF03466 LysR substrate binding domain DM611_RS11775 PF08281 Sigma-70, region 4 DM611_RS11775 PF04542 Sigma-70 region 2 DM611_RS11775 PF12680 SnoaL-like domain DM611_RS11780 PF16123 Hydroxyacylglutathione hydrolase C-terminus DM611_RS11780 PF00753 Metallo-beta-lactamase superfamily DM611_RS11795 PF00561 alpha/beta hydrolase fold DM611_RS11800 PF17755 UvrA DNA-binding domain DM611_RS11810 PF07715 TonB-dependent Receptor Plug Domain DM611_RS11810 PF00593 TonB dependent receptor DM611_RS11810 PF07660 Secretin and TonB N terminus short domain DM611_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS11825 PF03466 LysR substrate binding domain DM611_RS11830 PF07690 Major Facilitator Superfamily DM611_RS11840 PF00356 Bacterial regulatory proteins, lacI family DM611_RS11845 PF05524 PEP-utilising enzyme, N-terminal DM611_RS11845 PF00391 PEP-utilising enzyme, mobile domain DM611_RS11845 PF02896 PEP-utilising enzyme, TIM barrel domain DM611_RS11845 PF00381 PTS HPr component phosphorylation site DM611_RS11845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DM611_RS11850 PF00294 pfkB family carbohydrate kinase DM611_RS11855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DM611_RS11880 PF02219 Methylenetetrahydrofolate reductase DM611_RS11885 PF03466 LysR substrate binding domain DM611_RS11885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS11890 PF03358 NADPH-dependent FMN reductase DM611_RS11900 PF01717 Cobalamin-independent synthase, Catalytic domain DM611_RS11920 PF03600 Citrate transporter DM611_RS11925 PF11954 Domain of unknown function (DUF3471) DM611_RS11925 PF00144 Beta-lactamase DM611_RS11930 PF00664 ABC transporter transmembrane region DM611_RS11930 PF00005 ABC transporter DM611_RS11935 PF00593 TonB dependent receptor DM611_RS11935 PF07715 TonB-dependent Receptor Plug Domain DM611_RS11950 PF00005 ABC transporter DM611_RS11975 PF12833 Helix-turn-helix domain DM611_RS11975 PF02311 AraC-like ligand binding domain DM611_RS11985 PF13411 MerR HTH family regulatory protein DM611_RS11990 PF07715 TonB-dependent Receptor Plug Domain DM611_RS11990 PF00593 TonB dependent receptor DM611_RS11995 PF02424 ApbE family DM611_RS12010 PF10503 Esterase PHB depolymerase DM611_RS12015 PF00593 TonB dependent receptor DM611_RS12015 PF07715 TonB-dependent Receptor Plug Domain DM611_RS12020 PF12697 Alpha/beta hydrolase family DM611_RS12025 PF01575 MaoC like domain DM611_RS12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS12030 PF00672 HAMP domain DM611_RS12030 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS12035 PF00196 Bacterial regulatory proteins, luxR family DM611_RS12035 PF00072 Response regulator receiver domain DM611_RS12040 PF13193 AMP-binding enzyme C-terminal domain DM611_RS12040 PF00501 AMP-binding enzyme DM611_RS12070 PF05922 Peptidase inhibitor I9 DM611_RS12070 PF02225 PA domain DM611_RS12070 PF13860 FlgD Ig-like domain DM611_RS12070 PF00082 Subtilase family DM611_RS12090 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS12100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM611_RS12105 PF12833 Helix-turn-helix domain DM611_RS12105 PF02311 AraC-like ligand binding domain DM611_RS12110 PF00158 Sigma-54 interaction domain DM611_RS12110 PF00072 Response regulator receiver domain DM611_RS12110 PF02954 Bacterial regulatory protein, Fis family DM611_RS12145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM611_RS12145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM611_RS12165 PF13350 Tyrosine phosphatase family DM611_RS12170 PF00593 TonB dependent receptor DM611_RS12170 PF07715 TonB-dependent Receptor Plug Domain DM611_RS12180 PF02245 Methylpurine-DNA glycosylase (MPG) DM611_RS12190 PF01551 Peptidase family M23 DM611_RS12195 PF02687 FtsX-like permease family DM611_RS12195 PF12704 MacB-like periplasmic core domain DM611_RS12195 PF00005 ABC transporter DM611_RS12210 PF00486 Transcriptional regulatory protein, C terminal DM611_RS12210 PF00072 Response regulator receiver domain DM611_RS12215 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS12215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS12215 PF00672 HAMP domain DM611_RS12235 PF07715 TonB-dependent Receptor Plug Domain DM611_RS12235 PF00593 TonB dependent receptor DM611_RS12255 PF06224 Winged helix DNA-binding domain DM611_RS12265 PF00593 TonB dependent receptor DM611_RS12265 PF07715 TonB-dependent Receptor Plug Domain DM611_RS12280 PF00561 alpha/beta hydrolase fold DM611_RS12295 PF15976 CS1-pili formation C-terminal DM611_RS12295 PF16967 E-set like domain DM611_RS12320 PF00690 Cation transporter/ATPase, N-terminus DM611_RS12320 PF00689 Cation transporting ATPase, C-terminus DM611_RS12325 PF02308 MgtC family DM611_RS12330 PF13426 PAS domain DM611_RS12330 PF08447 PAS fold DM611_RS12330 PF00989 PAS fold DM611_RS12330 PF13493 Domain of unknown function (DUF4118) DM611_RS12330 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS12335 PF00072 Response regulator receiver domain DM611_RS12335 PF00196 Bacterial regulatory proteins, luxR family DM611_RS12345 PF00892 EamA-like transporter family DM611_RS12350 PF06772 Bacterial low temperature requirement A protein (LtrA) DM611_RS12375 PF00753 Metallo-beta-lactamase superfamily DM611_RS12390 PF00384 Molybdopterin oxidoreductase DM611_RS12395 PF02634 FdhD/NarQ family DM611_RS12415 PF07690 Major Facilitator Superfamily DM611_RS12440 PF00005 ABC transporter DM611_RS12455 PF07715 TonB-dependent Receptor Plug Domain DM611_RS12455 PF00593 TonB dependent receptor DM611_RS12470 PF05425 Copper resistance protein D DM611_RS12475 PF00072 Response regulator receiver domain DM611_RS12475 PF00486 Transcriptional regulatory protein, C terminal DM611_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS12480 PF00672 HAMP domain DM611_RS12480 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS12485 PF03466 LysR substrate binding domain DM611_RS12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS12500 PF00873 AcrB/AcrD/AcrF family DM611_RS12505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS12505 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS12515 PF00486 Transcriptional regulatory protein, C terminal DM611_RS12515 PF00072 Response regulator receiver domain DM611_RS12520 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS12520 PF08521 Two-component sensor kinase N-terminal DM611_RS12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS12525 PF07971 Glycosyl hydrolase family 92 DM611_RS12525 PF17678 Glycosyl hydrolase family 92 N-terminal domain DM611_RS12545 PF08946 Osmosensory transporter coiled coil DM611_RS12545 PF00083 Sugar (and other) transporter DM611_RS12560 PF07536 HWE histidine kinase DM611_RS12560 PF08447 PAS fold DM611_RS12560 PF13426 PAS domain DM611_RS12580 PF07715 TonB-dependent Receptor Plug Domain DM611_RS12580 PF07660 Secretin and TonB N terminus short domain DM611_RS12580 PF00593 TonB dependent receptor DM611_RS12595 PF03466 LysR substrate binding domain DM611_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS12600 PF05726 Pirin C-terminal cupin domain DM611_RS12600 PF02678 Pirin DM611_RS12605 PF00857 Isochorismatase family DM611_RS12610 PF00857 Isochorismatase family DM611_RS12620 PF12848 ABC transporter DM611_RS12620 PF00005 ABC transporter DM611_RS12640 PF02472 Biopolymer transport protein ExbD/TolR DM611_RS12645 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS12665 PF12019 Type II transport protein GspH DM611_RS12665 PF07963 Prokaryotic N-terminal methylation motif DM611_RS12670 PF02501 Type II secretion system (T2SS), protein I DM611_RS12670 PF07963 Prokaryotic N-terminal methylation motif DM611_RS12675 PF11612 Type II secretion system (T2SS), protein J DM611_RS12675 PF07963 Prokaryotic N-terminal methylation motif DM611_RS12685 PF12849 PBP superfamily domain DM611_RS12690 PF00482 Type II secretion system (T2SS), protein F DM611_RS12695 PF00437 Type II/IV secretion system protein DM611_RS12700 PF00263 Bacterial type II and III secretion system protein DM611_RS12700 PF03958 Bacterial type II/III secretion system short domain DM611_RS12720 PF07963 Prokaryotic N-terminal methylation motif DM611_RS12720 PF08334 Type II secretion system (T2SS), protein G DM611_RS12755 PF01037 Lrp/AsnC ligand binding domain DM611_RS12770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS12770 PF08447 PAS fold DM611_RS12775 PF00175 Oxidoreductase NAD-binding domain DM611_RS12775 PF00258 Flavodoxin DM611_RS12775 PF00667 FAD binding domain DM611_RS12780 PF03459 TOBE domain DM611_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS12795 PF01497 Periplasmic binding protein DM611_RS12800 PF01032 FecCD transport family DM611_RS12805 PF00005 ABC transporter DM611_RS12810 PF05958 tRNA (Uracil-5-)-methyltransferase DM611_RS12810 PF01938 TRAM domain DM611_RS12815 PF00005 ABC transporter DM611_RS12815 PF08402 TOBE domain DM611_RS12820 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS12830 PF00027 Cyclic nucleotide-binding domain DM611_RS12830 PF13545 Crp-like helix-turn-helix domain DM611_RS12835 PF04055 Radical SAM superfamily DM611_RS12835 PF06969 HemN C-terminal domain DM611_RS12840 PF07690 Major Facilitator Superfamily DM611_RS12845 PF09312 SurA N-terminal domain DM611_RS12845 PF00639 PPIC-type PPIASE domain DM611_RS12850 PF02665 Nitrate reductase gamma subunit DM611_RS12855 PF02613 Nitrate reductase delta subunit DM611_RS12860 PF13247 4Fe-4S dicluster domain DM611_RS12860 PF14711 Respiratory nitrate reductase beta C-terminal DM611_RS12865 PF00384 Molybdopterin oxidoreductase DM611_RS12865 PF01568 Molydopterin dinucleotide binding domain DM611_RS12865 PF14710 Respiratory nitrate reductase alpha N-terminal DM611_RS12870 PF07690 Major Facilitator Superfamily DM611_RS12880 PF12804 MobA-like NTP transferase domain DM611_RS12885 PF02391 MoaE protein DM611_RS12895 PF03453 MoeA N-terminal region (domain I and II) DM611_RS12895 PF00994 Probable molybdopterin binding domain DM611_RS12895 PF03454 MoeA C-terminal region (domain IV) DM611_RS12900 PF00994 Probable molybdopterin binding domain DM611_RS12900 PF01967 MoaC family DM611_RS12905 PF04055 Radical SAM superfamily DM611_RS12905 PF06463 Molybdenum Cofactor Synthesis C DM611_RS12930 PF09278 MerR, DNA binding DM611_RS12930 PF00376 MerR family regulatory protein DM611_RS12935 PF03358 NADPH-dependent FMN reductase DM611_RS12945 PF01451 Low molecular weight phosphotyrosine protein phosphatase DM611_RS12950 PF01758 Sodium Bile acid symporter family DM611_RS12970 PF01219 Prokaryotic diacylglycerol kinase DM611_RS12990 PF04972 BON domain DM611_RS12990 PF00691 OmpA family DM611_RS13015 PF00106 short chain dehydrogenase DM611_RS13020 PF00501 AMP-binding enzyme DM611_RS13020 PF00550 Phosphopantetheine attachment site DM611_RS13020 PF00668 Condensation domain DM611_RS13020 PF00975 Thioesterase domain DM611_RS13025 PF00857 Isochorismatase family DM611_RS13025 PF00550 Phosphopantetheine attachment site DM611_RS13030 PF00550 Phosphopantetheine attachment site DM611_RS13030 PF00857 Isochorismatase family DM611_RS13035 PF00501 AMP-binding enzyme DM611_RS13035 PF13193 AMP-binding enzyme C-terminal domain DM611_RS13040 PF00425 chorismate binding enzyme DM611_RS13045 PF07690 Major Facilitator Superfamily DM611_RS13050 PF12823 Domain of unknown function (DUF3817) DM611_RS13050 PF03176 MMPL family DM611_RS13055 PF00296 Luciferase-like monooxygenase DM611_RS13070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DM611_RS13070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DM611_RS13075 PF01613 Flavin reductase like domain DM611_RS13085 PF00487 Fatty acid desaturase DM611_RS13090 PF00175 Oxidoreductase NAD-binding domain DM611_RS13090 PF00970 Oxidoreductase FAD-binding domain DM611_RS13090 PF00111 2Fe-2S iron-sulfur cluster binding domain DM611_RS13095 PF00440 Bacterial regulatory proteins, tetR family DM611_RS13100 PF03797 Autotransporter beta-domain DM611_RS13105 PF00593 TonB dependent receptor DM611_RS13105 PF07715 TonB-dependent Receptor Plug Domain DM611_RS13115 PF01325 Iron dependent repressor, N-terminal DNA binding domain DM611_RS13115 PF02742 Iron dependent repressor, metal binding and dimerisation domain DM611_RS13120 PF01566 Natural resistance-associated macrophage protein DM611_RS13135 PF00268 Ribonucleotide reductase, small chain DM611_RS13140 PF03477 ATP cone domain DM611_RS13140 PF00317 Ribonucleotide reductase, all-alpha domain DM611_RS13140 PF02867 Ribonucleotide reductase, barrel domain DM611_RS13145 PF08659 KR domain DM611_RS13145 PF00550 Phosphopantetheine attachment site DM611_RS13145 PF14765 Polyketide synthase dehydratase DM611_RS13145 PF00107 Zinc-binding dehydrogenase DM611_RS13145 PF16197 Ketoacyl-synthetase C-terminal extension DM611_RS13145 PF02801 Beta-ketoacyl synthase, C-terminal domain DM611_RS13145 PF00109 Beta-ketoacyl synthase, N-terminal domain DM611_RS13145 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS13145 PF00698 Acyl transferase domain DM611_RS13150 PF00593 TonB dependent receptor DM611_RS13150 PF07715 TonB-dependent Receptor Plug Domain DM611_RS13155 PF02028 BCCT, betaine/carnitine/choline family transporter DM611_RS13180 PF00893 Small Multidrug Resistance protein DM611_RS13185 PF00893 Small Multidrug Resistance protein DM611_RS13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS13190 PF03466 LysR substrate binding domain DM611_RS13200 PF07715 TonB-dependent Receptor Plug Domain DM611_RS13200 PF00593 TonB dependent receptor DM611_RS13200 PF07660 Secretin and TonB N terminus short domain DM611_RS13205 PF00654 Voltage gated chloride channel DM611_RS13210 PF02308 MgtC family DM611_RS13220 PF01209 ubiE/COQ5 methyltransferase family DM611_RS13230 PF00691 OmpA family DM611_RS13235 PF13018 Extended Signal Peptide of Type V secretion system DM611_RS13235 PF03895 YadA-like membrane anchor domain DM611_RS13235 PF05658 Head domain of trimeric autotransporter adhesin DM611_RS13235 PF03895 YadA-like membrane anchor domain DM611_RS13235 PF05662 Coiled stalk of trimeric autotransporter adhesin DM611_RS13235 PF05662 Coiled stalk of trimeric autotransporter adhesin DM611_RS13235 PF05658 Head domain of trimeric autotransporter adhesin DM611_RS13235 PF13018 Extended Signal Peptide of Type V secretion system DM611_RS13265 PF13629 Pilus formation protein N terminal region DM611_RS13265 PF00263 Bacterial type II and III secretion system protein DM611_RS13265 PF04972 BON domain DM611_RS13275 PF00437 Type II/IV secretion system protein DM611_RS13315 PF00561 alpha/beta hydrolase fold DM611_RS13320 PF05977 Transmembrane secretion effector DM611_RS13330 PF01979 Amidohydrolase family DM611_RS13340 PF00857 Isochorismatase family DM611_RS13345 PF12833 Helix-turn-helix domain DM611_RS13345 PF10114 Sensory domain found in PocR DM611_RS13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS13355 PF00672 HAMP domain DM611_RS13355 PF07730 Histidine kinase DM611_RS13355 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DM611_RS13360 PF00072 Response regulator receiver domain DM611_RS13360 PF00196 Bacterial regulatory proteins, luxR family DM611_RS13365 PF01979 Amidohydrolase family DM611_RS13375 PF03466 LysR substrate binding domain DM611_RS13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS13385 PF01979 Amidohydrolase family DM611_RS13400 PF00593 TonB dependent receptor DM611_RS13400 PF07715 TonB-dependent Receptor Plug Domain DM611_RS13410 PF02611 CDP-diacylglycerol pyrophosphatase DM611_RS13430 PF06715 Gp5 C-terminal repeat (3 copies) DM611_RS13430 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS13470 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS13470 PF06715 Gp5 C-terminal repeat (3 copies) DM611_RS13480 PF13488 Glycine zipper DM611_RS13480 PF00691 OmpA family DM611_RS13490 PF06761 Intracellular multiplication and human macrophage-killing DM611_RS13490 PF14331 ImcF-related N-terminal domain DM611_RS13490 PF06744 Type VI secretion protein IcmF C-terminal DM611_RS13600 PF06715 Gp5 C-terminal repeat (3 copies) DM611_RS13600 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS13610 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS13610 PF07724 AAA domain (Cdc48 subfamily) DM611_RS13610 PF17871 AAA lid domain DM611_RS13610 PF10431 C-terminal, D2-small domain, of ClpB protein DM611_RS13620 PF05947 Type VI secretion system, TssF DM611_RS13635 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DM611_RS13640 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DM611_RS13655 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DM611_RS13700 PF09330 D-lactate dehydrogenase, membrane binding DM611_RS13700 PF01565 FAD binding domain DM611_RS13705 PF01070 FMN-dependent dehydrogenase DM611_RS13710 PF07729 FCD domain DM611_RS13710 PF00392 Bacterial regulatory proteins, gntR family DM611_RS13715 PF02652 L-lactate permease DM611_RS13730 PF12833 Helix-turn-helix domain DM611_RS13745 PF07690 Major Facilitator Superfamily DM611_RS13750 PF03466 LysR substrate binding domain DM611_RS13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS13755 PF14310 Fibronectin type III-like domain DM611_RS13755 PF00933 Glycosyl hydrolase family 3 N terminal domain DM611_RS13755 PF01915 Glycosyl hydrolase family 3 C-terminal domain DM611_RS13755 PF07691 PA14 domain DM611_RS13780 PF03466 LysR substrate binding domain DM611_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS13805 PF01336 OB-fold nucleic acid binding domain DM611_RS13805 PF02811 PHP domain DM611_RS13805 PF14579 Helix-hairpin-helix motif DM611_RS13805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DM611_RS13805 PF07733 Bacterial DNA polymerase III alpha NTPase domain DM611_RS13815 PF00392 Bacterial regulatory proteins, gntR family DM611_RS13815 PF00155 Aminotransferase class I and II DM611_RS13820 PF01168 Alanine racemase, N-terminal domain DM611_RS13825 PF02540 NAD synthase DM611_RS13825 PF00958 GMP synthase C terminal domain DM611_RS13825 PF00117 Glutamine amidotransferase class-I DM611_RS13845 PF08281 Sigma-70, region 4 DM611_RS13845 PF04542 Sigma-70 region 2 DM611_RS13855 PF00593 TonB dependent receptor DM611_RS13855 PF07715 TonB-dependent Receptor Plug Domain DM611_RS13875 PF01276 Orn/Lys/Arg decarboxylase, major domain DM611_RS13875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DM611_RS13875 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DM611_RS13880 PF13520 Amino acid permease DM611_RS13890 PF13098 Thioredoxin-like domain DM611_RS13895 PF00578 AhpC/TSA family DM611_RS13905 PF13411 MerR HTH family regulatory protein DM611_RS13970 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS13975 PF13426 PAS domain DM611_RS13975 PF08447 PAS fold DM611_RS13975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS13995 PF00563 EAL domain DM611_RS13995 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS13995 PF08447 PAS fold DM611_RS13995 PF05231 MASE1 DM611_RS13995 PF08448 PAS fold DM611_RS13995 PF13426 PAS domain DM611_RS14000 PF09371 Tex-like protein N-terminal domain DM611_RS14000 PF17674 HHH domain DM611_RS14000 PF00575 S1 RNA binding domain DM611_RS14000 PF16921 Tex protein YqgF-like domain DM611_RS14020 PF17263 Family of unknown function (DUF5329) DM611_RS14025 PF00561 alpha/beta hydrolase fold DM611_RS14040 PF08241 Methyltransferase domain DM611_RS14040 PF12697 Alpha/beta hydrolase family DM611_RS14045 PF01554 MatE DM611_RS14065 PF03618 Kinase/pyrophosphorylase DM611_RS14070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DM611_RS14070 PF00391 PEP-utilising enzyme, mobile domain DM611_RS14070 PF02896 PEP-utilising enzyme, TIM barrel domain DM611_RS14075 PF05552 Conserved TM helix DM611_RS14075 PF00924 Mechanosensitive ion channel DM611_RS14080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM611_RS14090 PF00929 Exonuclease DM611_RS14095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DM611_RS14100 PF01638 HxlR-like helix-turn-helix DM611_RS14110 PF13673 Acetyltransferase (GNAT) domain DM611_RS14125 PF09857 Putative toxin of bacterial toxin-antitoxin pair DM611_RS14135 PF07690 Major Facilitator Superfamily DM611_RS14145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM611_RS14145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS14165 PF01494 FAD binding domain DM611_RS14170 PF17754 MftR C-terminal domain DM611_RS14170 PF00440 Bacterial regulatory proteins, tetR family DM611_RS14175 PF00593 TonB dependent receptor DM611_RS14175 PF07715 TonB-dependent Receptor Plug Domain DM611_RS14185 PF00486 Transcriptional regulatory protein, C terminal DM611_RS14185 PF00072 Response regulator receiver domain DM611_RS14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS14190 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS14205 PF12704 MacB-like periplasmic core domain DM611_RS14205 PF02687 FtsX-like permease family DM611_RS14205 PF00005 ABC transporter DM611_RS14230 PF12462 DNA helicase IV / RNA helicase N terminal DM611_RS14230 PF00580 UvrD/REP helicase N-terminal domain DM611_RS14230 PF13361 UvrD-like helicase C-terminal domain DM611_RS14250 PF05662 Coiled stalk of trimeric autotransporter adhesin DM611_RS14250 PF03895 YadA-like membrane anchor domain DM611_RS14250 PF05658 Head domain of trimeric autotransporter adhesin DM611_RS14285 PF10544 T5orf172 domain DM611_RS14345 PF03466 LysR substrate binding domain DM611_RS14345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS14350 PF02525 Flavodoxin-like fold DM611_RS14360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM611_RS14360 PF02403 Seryl-tRNA synthetase N-terminal domain DM611_RS14365 PF03544 Gram-negative bacterial TonB protein C-terminal DM611_RS14375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM611_RS14380 PF01817 Chorismate mutase type II DM611_RS14380 PF01842 ACT domain DM611_RS14380 PF00800 Prephenate dehydratase DM611_RS14385 PF00266 Aminotransferase class-V DM611_RS14430 PF07969 Amidohydrolase family DM611_RS14435 PF00221 Aromatic amino acid lyase DM611_RS14445 PF17391 Urocanase N-terminal domain DM611_RS14445 PF17392 Urocanase C-terminal domain DM611_RS14445 PF01175 Urocanase Rossmann-like domain DM611_RS14460 PF00144 Beta-lactamase DM611_RS14465 PF07715 TonB-dependent Receptor Plug Domain DM611_RS14465 PF00593 TonB dependent receptor DM611_RS14490 PF00440 Bacterial regulatory proteins, tetR family DM611_RS14500 PF04371 Porphyromonas-type peptidyl-arginine deiminase DM611_RS14505 PF03466 LysR substrate binding domain DM611_RS14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS14550 PF00144 Beta-lactamase DM611_RS14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS14555 PF03466 LysR substrate binding domain DM611_RS14560 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS14560 PF00107 Zinc-binding dehydrogenase DM611_RS14565 PF13360 PQQ-like domain DM611_RS14570 PF03989 DNA gyrase C-terminal domain, beta-propeller DM611_RS14570 PF00521 DNA gyrase/topoisomerase IV, subunit A DM611_RS14575 PF01008 Initiation factor 2 subunit family DM611_RS14585 PF00152 tRNA synthetases class II (D, K and N) DM611_RS14595 PF00533 BRCA1 C Terminus (BRCT) domain DM611_RS14595 PF03120 NAD-dependent DNA ligase OB-fold domain DM611_RS14595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DM611_RS14595 PF01653 NAD-dependent DNA ligase adenylation domain DM611_RS14595 PF12826 Helix-hairpin-helix motif DM611_RS14600 PF00155 Aminotransferase class I and II DM611_RS14610 PF04354 ZipA, C-terminal FtsZ-binding domain DM611_RS14615 PF02463 RecF/RecN/SMC N terminal domain DM611_RS14620 PF03948 Ribosomal protein L9, C-terminal domain DM611_RS14620 PF01281 Ribosomal protein L9, N-terminal domain DM611_RS14625 PF01084 Ribosomal protein S18 DM611_RS14630 PF01250 Ribosomal protein S6 DM611_RS14635 PF03691 Uncharacterised protein family (UPF0167) DM611_RS14640 PF01521 Iron-sulphur cluster biosynthesis DM611_RS14645 PF01336 OB-fold nucleic acid binding domain DM611_RS14645 PF00152 tRNA synthetases class II (D, K and N) DM611_RS14665 PF00484 Carbonic anhydrase DM611_RS14670 PF06052 3-hydroxyanthranilic acid dioxygenase DM611_RS14675 PF00266 Aminotransferase class-V DM611_RS14680 PF01494 FAD binding domain DM611_RS14685 PF08411 Exonuclease C-terminal DM611_RS14685 PF00929 Exonuclease DM611_RS14695 PF00248 Aldo/keto reductase family DM611_RS14710 PF01513 ATP-NAD kinase DM611_RS14715 PF05088 Bacterial NAD-glutamate dehydrogenase DM611_RS14725 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS14725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS14730 PF00873 AcrB/AcrD/AcrF family DM611_RS14735 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS14735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM611_RS14735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS14740 PF03551 Transcriptional regulator PadR-like family DM611_RS14740 PF13847 Methyltransferase domain DM611_RS14745 PF02607 B12 binding domain DM611_RS14745 PF02965 Vitamin B12 dependent methionine synthase, activation domain DM611_RS14745 PF02574 Homocysteine S-methyltransferase DM611_RS14745 PF00809 Pterin binding enzyme DM611_RS14745 PF02310 B12 binding domain DM611_RS14750 PF02965 Vitamin B12 dependent methionine synthase, activation domain DM611_RS14750 PF02310 B12 binding domain DM611_RS14750 PF02574 Homocysteine S-methyltransferase DM611_RS14750 PF00809 Pterin binding enzyme DM611_RS14750 PF02607 B12 binding domain DM611_RS14760 PF01757 Acyltransferase family DM611_RS14770 PF04102 SlyX DM611_RS14775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DM611_RS14775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DM611_RS14775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DM611_RS14780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM611_RS14780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DM611_RS14785 PF00255 Glutathione peroxidase DM611_RS14795 PF00392 Bacterial regulatory proteins, gntR family DM611_RS14800 PF00005 ABC transporter DM611_RS14825 PF00206 Lyase DM611_RS14825 PF10415 Fumarase C C-terminus DM611_RS14830 PF00206 Lyase DM611_RS14830 PF08328 Adenylosuccinate lyase C-terminal DM611_RS14835 PF08007 Cupin superfamily protein DM611_RS14845 PF16870 2-oxoglutarate dehydrogenase C-terminal DM611_RS14845 PF02779 Transketolase, pyrimidine binding domain DM611_RS14845 PF00676 Dehydrogenase E1 component DM611_RS14845 PF16078 2-oxoglutarate dehydrogenase N-terminus DM611_RS14850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM611_RS14850 PF02817 e3 binding domain DM611_RS14850 PF00364 Biotin-requiring enzyme DM611_RS14855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM611_RS14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS14860 PF03466 LysR substrate binding domain DM611_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS14865 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS14865 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS14880 PF09423 PhoD-like phosphatase DM611_RS14880 PF16655 PhoD-like phosphatase, N-terminal domain DM611_RS14890 PF00772 DnaB-like helicase N terminal domain DM611_RS14890 PF03796 DnaB-like helicase C terminal domain DM611_RS14895 PF03358 NADPH-dependent FMN reductase DM611_RS14900 PF13537 Glutamine amidotransferase domain DM611_RS14900 PF00733 Asparagine synthase DM611_RS14905 PF02780 Transketolase, C-terminal domain DM611_RS14905 PF02779 Transketolase, pyrimidine binding domain DM611_RS14905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DM611_RS14910 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS14930 PF01026 TatD related DNase DM611_RS14935 PF00899 ThiF family DM611_RS14940 PF01322 Cytochrome C' DM611_RS14950 PF00313 'Cold-shock' DNA-binding domain DM611_RS14960 PF02253 Phospholipase A1 DM611_RS14965 PF03960 ArsC family DM611_RS14970 PF13417 Glutathione S-transferase, N-terminal domain DM611_RS14970 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS14980 PF05683 Fumarase C-terminus DM611_RS14980 PF05681 Fumarate hydratase (Fumerase) DM611_RS14985 PF04542 Sigma-70 region 2 DM611_RS14985 PF08281 Sigma-70, region 4 DM611_RS14985 PF12680 SnoaL-like domain DM611_RS14990 PF02627 Carboxymuconolactone decarboxylase family DM611_RS15000 PF00005 ABC transporter DM611_RS15005 PF00175 Oxidoreductase NAD-binding domain DM611_RS15005 PF00970 Oxidoreductase FAD-binding domain DM611_RS15010 PF00255 Glutathione peroxidase DM611_RS15015 PF01432 Peptidase family M3 DM611_RS15040 PF01694 Rhomboid family DM611_RS15045 PF00854 POT family DM611_RS15055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DM611_RS15055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DM611_RS15060 PF00545 ribonuclease DM611_RS15075 PF01106 NifU-like domain DM611_RS15080 PF01329 Pterin 4 alpha carbinolamine dehydratase DM611_RS15090 PF02535 ZIP Zinc transporter DM611_RS15095 PF01479 S4 domain DM611_RS15095 PF00849 RNA pseudouridylate synthase DM611_RS15100 PF12111 Polyribonucleotide phosphorylase C terminal DM611_RS15100 PF00575 S1 RNA binding domain DM611_RS15100 PF10150 Ribonuclease E/G family DM611_RS15115 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS15120 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS15125 PF01547 Bacterial extracellular solute-binding protein DM611_RS15140 PF00356 Bacterial regulatory proteins, lacI family DM611_RS15145 PF01722 BolA-like protein DM611_RS15150 PF03795 YCII-related domain DM611_RS15155 PF02616 Segregation and condensation protein ScpA DM611_RS15160 PF04079 Segregation and condensation complex subunit ScpB DM611_RS15165 PF00849 RNA pseudouridylate synthase DM611_RS15165 PF01479 S4 domain DM611_RS15175 PF07690 Major Facilitator Superfamily DM611_RS15195 PF00795 Carbon-nitrogen hydrolase DM611_RS15200 PF00155 Aminotransferase class I and II DM611_RS15205 PF00005 ABC transporter DM611_RS15210 PF03379 CcmB protein DM611_RS15215 PF01578 Cytochrome C assembly protein DM611_RS15225 PF03100 CcmE DM611_RS15230 PF01578 Cytochrome C assembly protein DM611_RS15230 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DM611_RS15235 PF08534 Redoxin DM611_RS15240 PF03918 Cytochrome C biogenesis protein DM611_RS15250 PF00561 alpha/beta hydrolase fold DM611_RS15260 PF00005 ABC transporter DM611_RS15260 PF00664 ABC transporter transmembrane region DM611_RS15265 PF00664 ABC transporter transmembrane region DM611_RS15265 PF00005 ABC transporter DM611_RS15270 PF01654 Cytochrome bd terminal oxidase subunit I DM611_RS15275 PF02322 Cytochrome bd terminal oxidase subunit II DM611_RS15330 PF14883 Hypothetical glycosyl hydrolase family 13 DM611_RS15330 PF01522 Polysaccharide deacetylase DM611_RS15335 PF00535 Glycosyl transferase family 2 DM611_RS15345 PF00171 Aldehyde dehydrogenase family DM611_RS15350 PF01472 PUA domain DM611_RS15350 PF00696 Amino acid kinase family DM611_RS15360 PF00206 Lyase DM611_RS15365 PF01118 Semialdehyde dehydrogenase, NAD binding domain DM611_RS15375 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DM611_RS15375 PF00696 Amino acid kinase family DM611_RS15380 PF01546 Peptidase family M20/M25/M40 DM611_RS15380 PF07687 Peptidase dimerisation domain DM611_RS15385 PF00764 Arginosuccinate synthase DM611_RS15390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM611_RS15390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM611_RS15400 PF01406 tRNA synthetases class I (C) catalytic domain DM611_RS15400 PF09190 DALR domain DM611_RS15405 PF02657 Fe-S metabolism associated domain DM611_RS15415 PF01258 Prokaryotic dksA/traR C4-type zinc finger DM611_RS15420 PF01809 Putative membrane protein insertion efficiency factor DM611_RS15425 PF01979 Amidohydrolase family DM611_RS15430 PF08460 Bacterial SH3 domain DM611_RS15430 PF01551 Peptidase family M23 DM611_RS15445 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS15455 PF01979 Amidohydrolase family DM611_RS15460 PF08207 Elongation factor P (EF-P) KOW-like domain DM611_RS15460 PF01132 Elongation factor P (EF-P) OB domain DM611_RS15460 PF09285 Elongation factor P, C-terminal DM611_RS15465 PF04055 Radical SAM superfamily DM611_RS15470 PF00563 EAL domain DM611_RS15470 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS15470 PF13188 PAS domain DM611_RS15470 PF03707 Bacterial signalling protein N terminal repeat DM611_RS15480 PF00588 SpoU rRNA Methylase family DM611_RS15485 PF00459 Inositol monophosphatase family DM611_RS15490 PF01435 Peptidase family M48 DM611_RS15495 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM611_RS15500 PF00106 short chain dehydrogenase DM611_RS15505 PF07879 PHB/PHA accumulation regulator DNA-binding domain DM611_RS15505 PF05233 PHB accumulation regulatory domain DM611_RS15520 PF08676 MutL C terminal dimerisation domain DM611_RS15520 PF01119 DNA mismatch repair protein, C-terminal domain DM611_RS15525 PF01520 N-acetylmuramoyl-L-alanine amidase DM611_RS15530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DM611_RS15535 PF03853 YjeF-related protein N-terminus DM611_RS15535 PF01256 Carbohydrate kinase DM611_RS15540 PF08331 Domain of unknown function (DUF1730) DM611_RS15545 PF13742 OB-fold nucleic acid binding domain DM611_RS15545 PF02601 Exonuclease VII, large subunit DM611_RS15555 PF03781 Sulfatase-modifying factor enzyme 1 DM611_RS15560 PF00570 HRDC domain DM611_RS15560 PF01612 3'-5' exonuclease DM611_RS15570 PF00593 TonB dependent receptor DM611_RS15570 PF07715 TonB-dependent Receptor Plug Domain DM611_RS15575 PF00440 Bacterial regulatory proteins, tetR family DM611_RS15585 PF00561 alpha/beta hydrolase fold DM611_RS15590 PF07859 alpha/beta hydrolase fold DM611_RS15605 PF13099 Domain of unknown function (DUF3944) DM611_RS15605 PF03981 Ubiquinol-cytochrome C chaperone DM611_RS15620 PF04245 37-kD nucleoid-associated bacterial protein DM611_RS15645 PF12833 Helix-turn-helix domain DM611_RS15645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DM611_RS15645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DM611_RS15645 PF02805 Metal binding domain of Ada DM611_RS15650 PF00107 Zinc-binding dehydrogenase DM611_RS15650 PF16884 N-terminal domain of oxidoreductase DM611_RS15675 PF12806 Acetyl-CoA dehydrogenase C-terminal like DM611_RS15675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM611_RS15675 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS15675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS15690 PF02779 Transketolase, pyrimidine binding domain DM611_RS15690 PF02780 Transketolase, C-terminal domain DM611_RS15690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DM611_RS15720 PF00440 Bacterial regulatory proteins, tetR family DM611_RS15720 PF17932 Tetracyclin repressor-like, C-terminal domain DM611_RS15725 PF00893 Small Multidrug Resistance protein DM611_RS15730 PF07043 Protein of unknown function (DUF1328) DM611_RS15735 PF01810 LysE type translocator DM611_RS15740 PF00574 Clp protease DM611_RS15750 PF01022 Bacterial regulatory protein, arsR family DM611_RS15755 PF01177 Asp/Glu/Hydantoin racemase DM611_RS15795 PF00216 Bacterial DNA-binding protein DM611_RS15800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DM611_RS15800 PF01588 Putative tRNA binding domain DM611_RS15800 PF03147 Ferredoxin-fold anticodon binding domain DM611_RS15800 PF03484 tRNA synthetase B5 domain DM611_RS15800 PF03483 B3/4 domain DM611_RS15805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DM611_RS15805 PF01409 tRNA synthetases class II core domain (F) DM611_RS15810 PF00453 Ribosomal protein L20 DM611_RS15815 PF01632 Ribosomal protein L35 DM611_RS15820 PF00707 Translation initiation factor IF-3, C-terminal domain DM611_RS15820 PF05198 Translation initiation factor IF-3, N-terminal domain DM611_RS15825 PF02824 TGS domain DM611_RS15825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM611_RS15825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM611_RS15825 PF03129 Anticodon binding domain DM611_RS15845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM611_RS15850 PF00704 Glycosyl hydrolases family 18 DM611_RS15850 PF00041 Fibronectin type III domain DM611_RS15860 PF00575 S1 RNA binding domain DM611_RS15860 PF00013 KH domain DM611_RS15860 PF01138 3' exoribonuclease family, domain 1 DM611_RS15860 PF03725 3' exoribonuclease family, domain 2 DM611_RS15860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DM611_RS15865 PF00312 Ribosomal protein S15 DM611_RS15870 PF01509 TruB family pseudouridylate synthase (N terminal domain) DM611_RS15870 PF09157 Pseudouridine synthase II TruB, C-terminal DM611_RS15870 PF16198 tRNA pseudouridylate synthase B C-terminal domain DM611_RS15875 PF02033 Ribosome-binding factor A DM611_RS15880 PF00009 Elongation factor Tu GTP binding domain DM611_RS15880 PF11987 Translation-initiation factor 2 DM611_RS15880 PF08364 Bacterial translation initiation factor IF-2 associated region DM611_RS15880 PF04760 Translation initiation factor IF-2, N-terminal region DM611_RS15885 PF13184 NusA-like KH domain DM611_RS15885 PF08529 NusA N-terminal domain DM611_RS15885 PF00575 S1 RNA binding domain DM611_RS15890 PF17384 RimP C-terminal SH3 domain DM611_RS15890 PF02576 RimP N-terminal domain DM611_RS15905 PF00361 Proton-conducting membrane transporter DM611_RS15910 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DM611_RS15910 PF00361 Proton-conducting membrane transporter DM611_RS15915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DM611_RS15915 PF00361 Proton-conducting membrane transporter DM611_RS15920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DM611_RS15925 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DM611_RS15930 PF12838 4Fe-4S dicluster domain DM611_RS15935 PF00146 NADH dehydrogenase DM611_RS15940 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM611_RS15940 PF00384 Molybdopterin oxidoreductase DM611_RS15940 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DM611_RS15945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DM611_RS15945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM611_RS15945 PF10531 SLBB domain DM611_RS15955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DM611_RS15960 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DM611_RS15965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DM611_RS15970 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DM611_RS15985 PF00121 Triosephosphate isomerase DM611_RS15995 PF00884 Sulfatase DM611_RS15995 PF11893 Domain of unknown function (DUF3413) DM611_RS16000 PF00534 Glycosyl transferases group 1 DM611_RS16000 PF13439 Glycosyltransferase Family 4 DM611_RS16005 PF01522 Polysaccharide deacetylase DM611_RS16010 PF16363 GDP-mannose 4,6 dehydratase DM611_RS16020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM611_RS16020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM611_RS16020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM611_RS16020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM611_RS16025 PF17848 Acetyl-coA carboxylase zinc finger domain DM611_RS16025 PF01039 Carboxyl transferase domain DM611_RS16030 PF00290 Tryptophan synthase alpha chain DM611_RS16040 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS16045 PF03466 LysR substrate binding domain DM611_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS16050 PF05816 Toxic anion resistance protein (TelA) DM611_RS16060 PF17864 RuvB AAA lid domain DM611_RS16060 PF05491 RuvB C-terminal winged helix domain DM611_RS16060 PF05496 Holliday junction DNA helicase RuvB P-loop domain DM611_RS16075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DM611_RS16080 PF01416 tRNA pseudouridine synthase DM611_RS16095 PF02774 Semialdehyde dehydrogenase, dimerisation domain DM611_RS16095 PF01118 Semialdehyde dehydrogenase, NAD binding domain DM611_RS16100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM611_RS16100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM611_RS16105 PF01264 Chorismate synthase DM611_RS16110 PF05175 Methyltransferase small domain DM611_RS16115 PF02630 SCO1/SenC DM611_RS16120 PF02666 Phosphatidylserine decarboxylase DM611_RS16135 PF05872 Bacterial protein of unknown function (DUF853) DM611_RS16140 PF03449 Transcription elongation factor, N-terminal DM611_RS16140 PF01272 Transcription elongation factor, GreA/GreB, C-term DM611_RS16150 PF00919 Uncharacterized protein family UPF0004 DM611_RS16150 PF04055 Radical SAM superfamily DM611_RS16150 PF18693 TRAM domain DM611_RS16155 PF01738 Dienelactone hydrolase family DM611_RS16165 PF00692 dUTPase DM611_RS16170 PF10609 NUBPL iron-transfer P-loop NTPase DM611_RS16175 PF07715 TonB-dependent Receptor Plug Domain DM611_RS16175 PF00593 TonB dependent receptor DM611_RS16190 PF00593 TonB dependent receptor DM611_RS16190 PF07715 TonB-dependent Receptor Plug Domain DM611_RS16195 PF05649 Peptidase family M13 DM611_RS16195 PF01431 Peptidase family M13 DM611_RS16205 PF00665 Integrase core domain DM611_RS16205 PF13333 Integrase core domain DM611_RS16205 PF13276 HTH-like domain DM611_RS16235 PF00892 EamA-like transporter family DM611_RS16240 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS16240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM611_RS16245 PF01266 FAD dependent oxidoreductase DM611_RS16250 PF04235 Protein of unknown function (DUF418) DM611_RS16255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM611_RS16260 PF00877 NlpC/P60 family DM611_RS16265 PF00877 NlpC/P60 family DM611_RS16270 PF00375 Sodium:dicarboxylate symporter family DM611_RS16285 PF01171 PP-loop family DM611_RS16285 PF09179 TilS substrate binding domain DM611_RS16285 PF11734 TilS substrate C-terminal domain DM611_RS16290 PF02609 Exonuclease VII small subunit DM611_RS16295 PF00348 Polyprenyl synthetase DM611_RS16305 PF01523 Putative modulator of DNA gyrase DM611_RS16310 PF04751 Protein of unknown function (DUF615) DM611_RS16315 PF01523 Putative modulator of DNA gyrase DM611_RS16325 PF00575 S1 RNA binding domain DM611_RS16325 PF10150 Ribonuclease E/G family DM611_RS16330 PF02545 Maf-like protein DM611_RS16335 PF04402 Protein of unknown function (DUF541) DM611_RS16345 PF00593 TonB dependent receptor DM611_RS16345 PF07715 TonB-dependent Receptor Plug Domain DM611_RS16350 PF13520 Amino acid permease DM611_RS16360 PF02590 Predicted SPOUT methyltransferase DM611_RS16370 PF01467 Cytidylyltransferase-like DM611_RS16385 PF00133 tRNA synthetases class I (I, L, M and V) DM611_RS16385 PF08264 Anticodon-binding domain of tRNA DM611_RS16385 PF13603 Leucyl-tRNA synthetase, Domain 2 DM611_RS16395 PF00085 Thioredoxin DM611_RS16405 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS16405 PF01590 GAF domain DM611_RS16405 PF00563 EAL domain DM611_RS16405 PF00360 Phytochrome region DM611_RS16425 PF02592 Putative vitamin uptake transporter DM611_RS16435 PF00144 Beta-lactamase DM611_RS16440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM611_RS16450 PF01588 Putative tRNA binding domain DM611_RS16450 PF09334 tRNA synthetases class I (M) DM611_RS16460 PF04060 Putative Fe-S cluster DM611_RS16465 PF01042 Endoribonuclease L-PSP DM611_RS16470 PF09924 Uncharacterised conserved protein (DUF2156) DM611_RS16470 PF03706 Lysylphosphatidylglycerol synthase TM region DM611_RS16500 PF08274 PhnA Zinc-Ribbon DM611_RS16500 PF03831 PhnA domain DM611_RS16505 PF00012 Hsp70 protein DM611_RS16530 PF04542 Sigma-70 region 2 DM611_RS16530 PF08281 Sigma-70, region 4 DM611_RS16545 PF01258 Prokaryotic dksA/traR C4-type zinc finger DM611_RS16550 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DM611_RS16555 PF01863 Protein of unknown function DUF45 DM611_RS16565 PF13091 PLD-like domain DM611_RS16575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DM611_RS16575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DM611_RS16580 PF00082 Subtilase family DM611_RS16580 PF03797 Autotransporter beta-domain DM611_RS16585 PF00108 Thiolase, N-terminal domain DM611_RS16585 PF02803 Thiolase, C-terminal domain DM611_RS16600 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS16600 PF18158 Adaptive response protein AidB N-terminal domain DM611_RS16600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS16610 PF04675 DNA ligase N terminus DM611_RS16610 PF01068 ATP dependent DNA ligase domain DM611_RS16610 PF04679 ATP dependent DNA ligase C terminal region DM611_RS16615 PF08494 DEAD/H associated DM611_RS16615 PF00270 DEAD/DEAH box helicase DM611_RS16615 PF00271 Helicase conserved C-terminal domain DM611_RS16630 PF01494 FAD binding domain DM611_RS16635 PF00313 'Cold-shock' DNA-binding domain DM611_RS16640 PF01048 Phosphorylase superfamily DM611_RS16645 PF00156 Phosphoribosyl transferase domain DM611_RS16650 PF00933 Glycosyl hydrolase family 3 N terminal domain DM611_RS16655 PF01323 DSBA-like thioredoxin domain DM611_RS16660 PF01928 CYTH domain DM611_RS16665 PF05958 tRNA (Uracil-5-)-methyltransferase DM611_RS16670 PF00486 Transcriptional regulatory protein, C terminal DM611_RS16670 PF00072 Response regulator receiver domain DM611_RS16675 PF11967 Recombination protein O N terminal DM611_RS16675 PF02565 Recombination protein O C terminal DM611_RS16680 PF01926 50S ribosome-binding GTPase DM611_RS16680 PF07650 KH domain DM611_RS16685 PF14622 Ribonuclease-III-like DM611_RS16685 PF00035 Double-stranded RNA binding motif DM611_RS16695 PF10502 Signal peptidase, peptidase S26 DM611_RS16700 PF03144 Elongation factor Tu domain 2 DM611_RS16700 PF06421 GTP-binding protein LepA C-terminus DM611_RS16700 PF00679 Elongation factor G C-terminus DM611_RS16700 PF00009 Elongation factor Tu GTP binding domain DM611_RS16705 PF13180 PDZ domain DM611_RS16715 PF08281 Sigma-70, region 4 DM611_RS16715 PF04542 Sigma-70 region 2 DM611_RS16720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM611_RS16720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM611_RS16720 PF00378 Enoyl-CoA hydratase/isomerase DM611_RS16725 PF02678 Pirin DM611_RS16725 PF05726 Pirin C-terminal cupin domain DM611_RS16730 PF00230 Major intrinsic protein DM611_RS16740 PF05726 Pirin C-terminal cupin domain DM611_RS16740 PF02678 Pirin DM611_RS16750 PF13722 5TM C-terminal transporter carbon starvation CstA DM611_RS16750 PF02554 Carbon starvation protein CstA DM611_RS16755 PF04328 Selenoprotein, putative DM611_RS16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS16770 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS16770 PF00672 HAMP domain DM611_RS16775 PF00486 Transcriptional regulatory protein, C terminal DM611_RS16775 PF00072 Response regulator receiver domain DM611_RS16790 PF00884 Sulfatase DM611_RS16790 PF08019 Phosphoethanolamine transferase EptA/EptB DM611_RS16810 PF07690 Major Facilitator Superfamily DM611_RS16815 PF02347 Glycine cleavage system P-protein DM611_RS16825 PF00324 Amino acid permease DM611_RS16830 PF12833 Helix-turn-helix domain DM611_RS16830 PF02311 AraC-like ligand binding domain DM611_RS16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS16845 PF00672 HAMP domain DM611_RS16845 PF02203 Tar ligand binding domain homologue DM611_RS16855 PF00709 Adenylosuccinate synthetase DM611_RS16865 PF01145 SPFH domain / Band 7 family DM611_RS16870 PF01145 SPFH domain / Band 7 family DM611_RS16870 PF12221 Bacterial membrane protein N terminal DM611_RS16875 PF00107 Zinc-binding dehydrogenase DM611_RS16875 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS16880 PF00072 Response regulator receiver domain DM611_RS16885 PF01556 DnaJ C terminal domain DM611_RS16885 PF00226 DnaJ domain DM611_RS16890 PF08534 Redoxin DM611_RS16900 PF00905 Penicillin binding protein transpeptidase domain DM611_RS16900 PF06832 Penicillin-Binding Protein C-terminus Family DM611_RS16900 PF00912 Transglycosylase DM611_RS16905 PF17962 Bacterial macroglobulin domain 6 DM611_RS16905 PF01835 MG2 domain DM611_RS16905 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DM611_RS16905 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DM611_RS16905 PF00207 Alpha-2-macroglobulin family DM611_RS16905 PF07703 Alpha-2-macroglobulin bait region domain DM611_RS16905 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DM611_RS16905 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DM611_RS16910 PF03972 MmgE/PrpD family DM611_RS16915 PF04303 PrpF protein DM611_RS16925 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DM611_RS16930 PF00694 Aconitase C-terminal domain DM611_RS16930 PF00330 Aconitase family (aconitate hydratase) DM611_RS16935 PF00285 Citrate synthase, C-terminal domain DM611_RS16945 PF06506 Propionate catabolism activator DM611_RS16945 PF00158 Sigma-54 interaction domain DM611_RS16945 PF02954 Bacterial regulatory protein, Fis family DM611_RS16955 PF00583 Acetyltransferase (GNAT) family DM611_RS16960 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DM611_RS16960 PF01243 Pyridoxamine 5'-phosphate oxidase DM611_RS16975 PF01202 Shikimate kinase DM611_RS16980 PF01761 3-dehydroquinate synthase DM611_RS16990 PF01208 Uroporphyrinogen decarboxylase (URO-D) DM611_RS16995 PF07690 Major Facilitator Superfamily DM611_RS17000 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS17000 PF01627 Hpt domain DM611_RS17000 PF00072 Response regulator receiver domain DM611_RS17000 PF00672 HAMP domain DM611_RS17000 PF17149 Periplasmic sensor domain found in signal transduction proteins DM611_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS17005 PF17149 Periplasmic sensor domain found in signal transduction proteins DM611_RS17005 PF00672 HAMP domain DM611_RS17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS17005 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS17005 PF01627 Hpt domain DM611_RS17005 PF00072 Response regulator receiver domain DM611_RS17015 PF01292 Prokaryotic cytochrome b561 DM611_RS17030 PF03315 Serine dehydratase beta chain DM611_RS17030 PF03313 Serine dehydratase alpha chain DM611_RS17035 PF12697 Alpha/beta hydrolase family DM611_RS17040 PF03447 Homoserine dehydrogenase, NAD binding domain DM611_RS17040 PF00696 Amino acid kinase family DM611_RS17040 PF00742 Homoserine dehydrogenase DM611_RS17045 PF01053 Cys/Met metabolism PLP-dependent enzyme DM611_RS17050 PF00561 alpha/beta hydrolase fold DM611_RS17055 PF08525 Opacity-associated protein A N-terminal motif DM611_RS17055 PF01551 Peptidase family M23 DM611_RS17055 PF01476 LysM domain DM611_RS17060 PF16658 Class II release factor RF3, C-terminal domain DM611_RS17060 PF00009 Elongation factor Tu GTP binding domain DM611_RS17065 PF03006 Haemolysin-III related DM611_RS17080 PF00535 Glycosyl transferase family 2 DM611_RS17085 PF00912 Transglycosylase DM611_RS17090 PF01430 Hsp33 protein DM611_RS17100 PF07715 TonB-dependent Receptor Plug Domain DM611_RS17100 PF00593 TonB dependent receptor DM611_RS17105 PF01209 ubiE/COQ5 methyltransferase family DM611_RS17135 PF00440 Bacterial regulatory proteins, tetR family DM611_RS17145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM611_RS17145 PF02770 Acyl-CoA dehydrogenase, middle domain DM611_RS17145 PF09317 Domain of unknown function (DUF1974) DM611_RS17145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM611_RS17175 PF03466 LysR substrate binding domain DM611_RS17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS17185 PF01597 Glycine cleavage H-protein DM611_RS17190 PF08669 Glycine cleavage T-protein C-terminal barrel domain DM611_RS17190 PF01571 Aminomethyltransferase folate-binding domain DM611_RS17200 PF16200 C-terminal region of band_7 DM611_RS17200 PF01145 SPFH domain / Band 7 family DM611_RS17210 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DM611_RS17215 PF03819 MazG nucleotide pyrophosphohydrolase domain DM611_RS17220 PF00459 Inositol monophosphatase family DM611_RS17225 PF00293 NUDIX domain DM611_RS17230 PF00202 Aminotransferase class-III DM611_RS17235 PF04452 RNA methyltransferase DM611_RS17250 PF01627 Hpt domain DM611_RS17250 PF01584 CheW-like domain DM611_RS17250 PF00072 Response regulator receiver domain DM611_RS17250 PF02895 Signal transducing histidine kinase, homodimeric domain DM611_RS17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS17255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DM611_RS17255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS17260 PF01584 CheW-like domain DM611_RS17265 PF00072 Response regulator receiver domain DM611_RS17270 PF00072 Response regulator receiver domain DM611_RS17275 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DM611_RS17275 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DM611_RS17285 PF00814 Glycoprotease family DM611_RS17290 PF13307 Helicase C-terminal domain DM611_RS17290 PF04851 Type III restriction enzyme, res subunit DM611_RS17300 PF14814 Bifunctional transglycosylase second domain DM611_RS17300 PF00905 Penicillin binding protein transpeptidase domain DM611_RS17300 PF00912 Transglycosylase DM611_RS17305 PF00535 Glycosyl transferase family 2 DM611_RS17315 PF02824 TGS domain DM611_RS17315 PF04607 Region found in RelA / SpoT proteins DM611_RS17315 PF13291 ACT domain DM611_RS17325 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DM611_RS17325 PF04408 Helicase associated domain (HA2) DM611_RS17325 PF00271 Helicase conserved C-terminal domain DM611_RS17325 PF11898 Domain of unknown function (DUF3418) DM611_RS17325 PF00270 DEAD/DEAH box helicase DM611_RS17330 PF00210 Ferritin-like domain DM611_RS17335 PF09382 RQC domain DM611_RS17335 PF16124 RecQ zinc-binding DM611_RS17335 PF00271 Helicase conserved C-terminal domain DM611_RS17335 PF00270 DEAD/DEAH box helicase DM611_RS17335 PF00570 HRDC domain DM611_RS17345 PF07732 Multicopper oxidase DM611_RS17345 PF00394 Multicopper oxidase DM611_RS17345 PF07731 Multicopper oxidase DM611_RS17350 PF05275 Copper resistance protein B precursor (CopB) DM611_RS17400 PF06508 Queuosine biosynthesis protein QueC DM611_RS17405 PF04055 Radical SAM superfamily DM611_RS17415 PF00691 OmpA family DM611_RS17420 PF04052 TolB amino-terminal domain DM611_RS17420 PF07676 WD40-like Beta Propeller Repeat DM611_RS17430 PF02472 Biopolymer transport protein ExbD/TolR DM611_RS17435 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS17440 PF03061 Thioesterase superfamily DM611_RS17445 PF17864 RuvB AAA lid domain DM611_RS17445 PF05491 RuvB C-terminal winged helix domain DM611_RS17445 PF05496 Holliday junction DNA helicase RuvB P-loop domain DM611_RS17450 PF02705 K+ potassium transporter DM611_RS17455 PF01330 RuvA N terminal domain DM611_RS17455 PF07499 RuvA, C-terminal domain DM611_RS17460 PF02075 Crossover junction endodeoxyribonuclease RuvC DM611_RS17465 PF01709 Transcriptional regulator DM611_RS17480 PF02938 GAD domain DM611_RS17480 PF01336 OB-fold nucleic acid binding domain DM611_RS17480 PF00152 tRNA synthetases class II (D, K and N) DM611_RS17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS17505 PF03466 LysR substrate binding domain DM611_RS17510 PF12848 ABC transporter DM611_RS17510 PF00005 ABC transporter DM611_RS17520 PF00999 Sodium/hydrogen exchanger family DM611_RS17520 PF02254 TrkA-N domain DM611_RS17525 PF01053 Cys/Met metabolism PLP-dependent enzyme DM611_RS17530 PF00072 Response regulator receiver domain DM611_RS17530 PF00486 Transcriptional regulatory protein, C terminal DM611_RS17535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS17535 PF16527 Two-component sensor protein CpxA, periplasmic domain DM611_RS17535 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS17535 PF00672 HAMP domain DM611_RS17545 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS17545 PF17871 AAA lid domain DM611_RS17545 PF10431 C-terminal, D2-small domain, of ClpB protein DM611_RS17545 PF02861 Clp amino terminal domain, pathogenicity island component DM611_RS17545 PF07724 AAA domain (Cdc48 subfamily) DM611_RS17570 PF00205 Thiamine pyrophosphate enzyme, central domain DM611_RS17570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM611_RS17570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM611_RS17585 PF00593 TonB dependent receptor DM611_RS17585 PF07715 TonB-dependent Receptor Plug Domain DM611_RS17590 PF02358 Trehalose-phosphatase DM611_RS17595 PF00723 Glycosyl hydrolases family 15 DM611_RS17600 PF00982 Glycosyltransferase family 20 DM611_RS17605 PF04134 Protein of unknown function, DUF393 DM611_RS17615 PF02578 Multi-copper polyphenol oxidoreductase laccase DM611_RS17620 PF00849 RNA pseudouridylate synthase DM611_RS17625 PF13525 Outer membrane lipoprotein DM611_RS17635 PF00795 Carbon-nitrogen hydrolase DM611_RS17635 PF02540 NAD synthase DM611_RS17660 PF00664 ABC transporter transmembrane region DM611_RS17660 PF00005 ABC transporter DM611_RS17665 PF00549 CoA-ligase DM611_RS17665 PF02629 CoA binding domain DM611_RS17670 PF08442 ATP-grasp domain DM611_RS17670 PF00549 CoA-ligase DM611_RS17675 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS17680 PF00072 Response regulator receiver domain DM611_RS17680 PF00158 Sigma-54 interaction domain DM611_RS17680 PF02954 Bacterial regulatory protein, Fis family DM611_RS17685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DM611_RS17685 PF00437 Type II/IV secretion system protein DM611_RS17690 PF07963 Prokaryotic N-terminal methylation motif DM611_RS17690 PF00114 Pilin (bacterial filament) DM611_RS17695 PF00482 Type II secretion system (T2SS), protein F DM611_RS17700 PF06750 Bacterial Peptidase A24 N-terminal domain DM611_RS17700 PF01478 Type IV leader peptidase family DM611_RS17705 PF01121 Dephospho-CoA kinase DM611_RS17740 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS17750 PF00672 HAMP domain DM611_RS17750 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS17755 PF00072 Response regulator receiver domain DM611_RS17755 PF00486 Transcriptional regulatory protein, C terminal DM611_RS17765 PF08443 RimK-like ATP-grasp domain DM611_RS17765 PF18030 RimK PreATP-grasp domain DM611_RS17790 PF03797 Autotransporter beta-domain DM611_RS17790 PF00657 GDSL-like Lipase/Acylhydrolase DM611_RS17800 PF05690 Thiazole biosynthesis protein ThiG DM611_RS17805 PF02390 Putative methyltransferase DM611_RS17810 PF03600 Citrate transporter DM611_RS17810 PF02080 TrkA-C domain DM611_RS17825 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM611_RS17830 PF01741 Large-conductance mechanosensitive channel, MscL DM611_RS17840 PF01235 Sodium:alanine symporter family DM611_RS17850 PF00588 SpoU rRNA Methylase family DM611_RS17850 PF08032 RNA 2'-O ribose methyltransferase substrate binding DM611_RS17855 PF01235 Sodium:alanine symporter family DM611_RS17860 PF13302 Acetyltransferase (GNAT) domain DM611_RS17865 PF00873 AcrB/AcrD/AcrF family DM611_RS17870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS17870 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS17890 PF03466 LysR substrate binding domain DM611_RS17895 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS17900 PF01661 Macro domain DM611_RS17910 PF00274 Fructose-bisphosphate aldolase class-I DM611_RS17915 PF00224 Pyruvate kinase, barrel domain DM611_RS17915 PF02887 Pyruvate kinase, alpha/beta domain DM611_RS17920 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS17925 PF00162 Phosphoglycerate kinase DM611_RS17940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DM611_RS17940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DM611_RS17945 PF03922 OmpW family DM611_RS17950 PF01548 Transposase DM611_RS17950 PF02371 Transposase IS116/IS110/IS902 family DM611_RS17965 PF00753 Metallo-beta-lactamase superfamily DM611_RS17980 PF03965 Penicillinase repressor DM611_RS17995 PF01381 Helix-turn-helix DM611_RS18000 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DM611_RS18005 PF02779 Transketolase, pyrimidine binding domain DM611_RS18005 PF02780 Transketolase, C-terminal domain DM611_RS18005 PF00456 Transketolase, thiamine diphosphate binding domain DM611_RS18010 PF00375 Sodium:dicarboxylate symporter family DM611_RS18020 PF07584 Aerotolerance regulator N-terminal DM611_RS18020 PF13519 von Willebrand factor type A domain DM611_RS18040 PF07726 ATPase family associated with various cellular activities (AAA) DM611_RS18040 PF17863 AAA lid domain DM611_RS18045 PF11741 AMIN domain DM611_RS18045 PF07660 Secretin and TonB N terminus short domain DM611_RS18045 PF00263 Bacterial type II and III secretion system protein DM611_RS18045 PF03958 Bacterial type II/III secretion system short domain DM611_RS18050 PF04351 Pilus assembly protein, PilP DM611_RS18055 PF04350 Pilus assembly protein, PilO DM611_RS18065 PF11104 Type IV pilus assembly protein PilM; DM611_RS18070 PF00905 Penicillin binding protein transpeptidase domain DM611_RS18070 PF00912 Transglycosylase DM611_RS18070 PF17092 Penicillin-binding protein OB-like domain DM611_RS18085 PF13018 Extended Signal Peptide of Type V secretion system DM611_RS18085 PF05658 Head domain of trimeric autotransporter adhesin DM611_RS18085 PF03895 YadA-like membrane anchor domain DM611_RS18085 PF05662 Coiled stalk of trimeric autotransporter adhesin DM611_RS18120 PF00285 Citrate synthase, C-terminal domain DM611_RS18125 PF01197 Ribosomal protein L31 DM611_RS18130 PF01156 Inosine-uridine preferring nucleoside hydrolase DM611_RS18135 PF00270 DEAD/DEAH box helicase DM611_RS18135 PF00271 Helicase conserved C-terminal domain DM611_RS18135 PF17191 RecG wedge domain DM611_RS18140 PF01042 Endoribonuclease L-PSP DM611_RS18145 PF04607 Region found in RelA / SpoT proteins DM611_RS18145 PF02824 TGS domain DM611_RS18145 PF13291 ACT domain DM611_RS18150 PF01192 RNA polymerase Rpb6 DM611_RS18155 PF00625 Guanylate kinase DM611_RS18160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM611_RS18160 PF01568 Molydopterin dinucleotide binding domain DM611_RS18160 PF00384 Molybdopterin oxidoreductase DM611_RS18165 PF01568 Molydopterin dinucleotide binding domain DM611_RS18165 PF00384 Molybdopterin oxidoreductase DM611_RS18165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM611_RS18170 PF09163 Formate dehydrogenase N, transmembrane DM611_RS18170 PF13247 4Fe-4S dicluster domain DM611_RS18170 PF12800 4Fe-4S binding domain DM611_RS18175 PF01292 Prokaryotic cytochrome b561 DM611_RS18180 PF04216 Protein involved in formate dehydrogenase formation DM611_RS18185 PF12390 Selenocysteine synthase N terminal DM611_RS18185 PF03841 L-seryl-tRNA selenium transferase DM611_RS18190 PF09107 Elongation factor SelB, winged helix DM611_RS18190 PF09106 Elongation factor SelB, winged helix DM611_RS18190 PF03144 Elongation factor Tu domain 2 DM611_RS18190 PF00009 Elongation factor Tu GTP binding domain DM611_RS18200 PF00586 AIR synthase related protein, N-terminal domain DM611_RS18200 PF02769 AIR synthase related protein, C-terminal domain DM611_RS18240 PF02463 RecF/RecN/SMC N terminal domain DM611_RS18245 PF13356 Arm DNA-binding domain DM611_RS18245 PF00589 Phage integrase family DM611_RS18245 PF14659 Phage integrase, N-terminal SAM-like domain DM611_RS18250 PF03755 YicC-like family, N-terminal region DM611_RS18250 PF08340 Domain of unknown function (DUF1732) DM611_RS18255 PF01138 3' exoribonuclease family, domain 1 DM611_RS18255 PF03725 3' exoribonuclease family, domain 2 DM611_RS18260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM611_RS18265 PF01725 Ham1 family DM611_RS18270 PF06969 HemN C-terminal domain DM611_RS18270 PF04055 Radical SAM superfamily DM611_RS18285 PF00557 Metallopeptidase family M24 DM611_RS18290 PF00557 Metallopeptidase family M24 DM611_RS18290 PF05195 Aminopeptidase P, N-terminal domain DM611_RS18295 PF03695 Uncharacterised protein family (UPF0149) DM611_RS18305 PF05164 Cell division protein ZapA DM611_RS18315 PF01812 5-formyltetrahydrofolate cyclo-ligase family DM611_RS18325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DM611_RS18335 PF13369 Transglutaminase-like superfamily DM611_RS18340 PF00301 Rubredoxin DM611_RS18345 PF02581 Thiamine monophosphate synthase DM611_RS18350 PF00202 Aminotransferase class-III DM611_RS18355 PF00127 Copper binding proteins, plastocyanin/azurin family DM611_RS18360 PF13419 Haloacid dehalogenase-like hydrolase DM611_RS18365 PF00202 Aminotransferase class-III DM611_RS18370 PF00520 Ion transport protein DM611_RS18370 PF00027 Cyclic nucleotide-binding domain DM611_RS18375 PF12889 Protein of unknown function (DUF3829) DM611_RS18400 PF01569 PAP2 superfamily DM611_RS18410 PF02875 Mur ligase family, glutamate ligase domain DM611_RS18410 PF08245 Mur ligase middle domain DM611_RS18410 PF01225 Mur ligase family, catalytic domain DM611_RS18420 PF00365 Phosphofructokinase DM611_RS18435 PF03030 Inorganic H+ pyrophosphatase DM611_RS18440 PF03544 Gram-negative bacterial TonB protein C-terminal DM611_RS18445 PF02472 Biopolymer transport protein ExbD/TolR DM611_RS18450 PF01618 MotA/TolQ/ExbB proton channel family DM611_RS18455 PF04304 Protein of unknown function (DUF454) DM611_RS18460 PF01126 Heme oxygenase DM611_RS18470 PF07715 TonB-dependent Receptor Plug Domain DM611_RS18470 PF00593 TonB dependent receptor DM611_RS18490 PF00719 Inorganic pyrophosphatase DM611_RS18505 PF00593 TonB dependent receptor DM611_RS18505 PF07715 TonB-dependent Receptor Plug Domain DM611_RS18510 PF01965 DJ-1/PfpI family DM611_RS18510 PF12833 Helix-turn-helix domain DM611_RS18515 PF00072 Response regulator receiver domain DM611_RS18515 PF00486 Transcriptional regulatory protein, C terminal DM611_RS18525 PF13667 ThiC-associated domain DM611_RS18525 PF01964 Radical SAM ThiC family DM611_RS18530 PF02028 BCCT, betaine/carnitine/choline family transporter DM611_RS18545 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DM611_RS18545 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DM611_RS18550 PF00205 Thiamine pyrophosphate enzyme, central domain DM611_RS18550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM611_RS18550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM611_RS18560 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS18565 PF08502 LeuA allosteric (dimerisation) domain DM611_RS18565 PF00682 HMGL-like DM611_RS18570 PF01209 ubiE/COQ5 methyltransferase family DM611_RS18575 PF00330 Aconitase family (aconitate hydratase) DM611_RS18580 PF00694 Aconitase C-terminal domain DM611_RS18585 PF00180 Isocitrate/isopropylmalate dehydrogenase DM611_RS18595 PF03466 LysR substrate binding domain DM611_RS18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS18600 PF00873 AcrB/AcrD/AcrF family DM611_RS18605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS18620 PF02321 Outer membrane efflux protein DM611_RS18625 PF13520 Amino acid permease DM611_RS18630 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DM611_RS18635 PF03279 Bacterial lipid A biosynthesis acyltransferase DM611_RS18660 PF03949 Malic enzyme, NAD binding domain DM611_RS18660 PF01515 Phosphate acetyl/butaryl transferase DM611_RS18660 PF00390 Malic enzyme, N-terminal domain DM611_RS18665 PF00375 Sodium:dicarboxylate symporter family DM611_RS18675 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS18685 PF00196 Bacterial regulatory proteins, luxR family DM611_RS18685 PF00072 Response regulator receiver domain DM611_RS18695 PF08521 Two-component sensor kinase N-terminal DM611_RS18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS18695 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS18700 PF00072 Response regulator receiver domain DM611_RS18700 PF00486 Transcriptional regulatory protein, C terminal DM611_RS18710 PF03600 Citrate transporter DM611_RS18715 PF00106 short chain dehydrogenase DM611_RS18740 PF03193 RsgA GTPase DM611_RS18745 PF00155 Aminotransferase class I and II DM611_RS18760 PF01522 Polysaccharide deacetylase DM611_RS18765 PF00462 Glutaredoxin DM611_RS18780 PF01979 Amidohydrolase family DM611_RS18785 PF00449 Urease alpha-subunit, N-terminal domain DM611_RS18785 PF01979 Amidohydrolase family DM611_RS18790 PF01323 DSBA-like thioredoxin domain DM611_RS18795 PF02645 Uncharacterised protein, DegV family COG1307 DM611_RS18805 PF02321 Outer membrane efflux protein DM611_RS18810 PF13533 Biotin-lipoyl like DM611_RS18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS18820 PF03466 LysR substrate binding domain DM611_RS18835 PF00563 EAL domain DM611_RS18835 PF01590 GAF domain DM611_RS18835 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS18835 PF00360 Phytochrome region DM611_RS18840 PF00756 Putative esterase DM611_RS18850 PF00107 Zinc-binding dehydrogenase DM611_RS18850 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS18855 PF02583 Metal-sensitive transcriptional repressor DM611_RS18860 PF00593 TonB dependent receptor DM611_RS18860 PF07715 TonB-dependent Receptor Plug Domain DM611_RS18865 PF03466 LysR substrate binding domain DM611_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS18870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM611_RS18905 PF03466 LysR substrate binding domain DM611_RS18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS18910 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS18910 PF00107 Zinc-binding dehydrogenase DM611_RS18920 PF04229 GrpB protein DM611_RS18925 PF04107 Glutamate-cysteine ligase family 2(GCS2) DM611_RS18935 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DM611_RS18935 PF12833 Helix-turn-helix domain DM611_RS18945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DM611_RS18945 PF00753 Metallo-beta-lactamase superfamily DM611_RS18945 PF10996 Beta-Casp domain DM611_RS18950 PF01926 50S ribosome-binding GTPase DM611_RS18955 PF00034 Cytochrome c DM611_RS18960 PF01323 DSBA-like thioredoxin domain DM611_RS18965 PF01323 DSBA-like thioredoxin domain DM611_RS18975 PF00892 EamA-like transporter family DM611_RS18980 PF01037 Lrp/AsnC ligand binding domain DM611_RS18990 PF00593 TonB dependent receptor DM611_RS18990 PF07715 TonB-dependent Receptor Plug Domain DM611_RS19000 PF00593 TonB dependent receptor DM611_RS19000 PF07715 TonB-dependent Receptor Plug Domain DM611_RS19010 PF02472 Biopolymer transport protein ExbD/TolR DM611_RS19015 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DM611_RS19015 PF01464 Transglycosylase SLT domain DM611_RS19025 PF12627 Probable RNA and SrmB- binding site of polymerase A DM611_RS19025 PF01966 HD domain DM611_RS19025 PF01743 Poly A polymerase head domain DM611_RS19050 PF13018 Extended Signal Peptide of Type V secretion system DM611_RS19050 PF03797 Autotransporter beta-domain DM611_RS19050 PF16168 Adhesin of bacterial autotransporter system, probable stalk DM611_RS19060 PF01979 Amidohydrolase family DM611_RS19065 PF01380 SIS domain DM611_RS19070 PF00356 Bacterial regulatory proteins, lacI family DM611_RS19075 PF07690 Major Facilitator Superfamily DM611_RS19080 PF02685 Glucokinase DM611_RS19090 PF00728 Glycosyl hydrolase family 20, catalytic domain DM611_RS19090 PF07691 PA14 domain DM611_RS19090 PF02838 Glycosyl hydrolase family 20, domain 2 DM611_RS19110 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DM611_RS19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS19120 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS19125 PF00072 Response regulator receiver domain DM611_RS19130 PF08446 PAS fold DM611_RS19130 PF00360 Phytochrome region DM611_RS19130 PF01590 GAF domain DM611_RS19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS19130 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS19135 PF04972 BON domain DM611_RS19140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM611_RS19140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM611_RS19145 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DM611_RS19145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM611_RS19160 PF11818 C-terminal domain of tail specific protease (DUF3340) DM611_RS19160 PF17804 Tail specific protease N-terminal domain DM611_RS19160 PF00595 PDZ domain DM611_RS19160 PF03572 Peptidase family S41 DM611_RS19165 PF04055 Radical SAM superfamily DM611_RS19165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DM611_RS19170 PF03099 Biotin/lipoate A/B protein ligase family DM611_RS19175 PF04359 Protein of unknown function (DUF493) DM611_RS19185 PF00768 D-alanyl-D-alanine carboxypeptidase DM611_RS19185 PF07943 Penicillin-binding protein 5, C-terminal domain DM611_RS19190 PF03330 Lytic transglycolase DM611_RS19190 PF05036 Sporulation related domain DM611_RS19195 PF13406 Transglycosylase SLT domain DM611_RS19200 PF01098 Cell cycle protein DM611_RS19205 PF01098 Cell cycle protein DM611_RS19210 PF03717 Penicillin-binding Protein dimerisation domain DM611_RS19210 PF00905 Penicillin binding protein transpeptidase domain DM611_RS19220 PF04085 rod shape-determining protein MreC DM611_RS19230 PF00294 pfkB family carbohydrate kinase DM611_RS19245 PF01433 Peptidase family M1 domain DM611_RS19245 PF11838 ERAP1-like C-terminal domain DM611_RS19250 PF01209 ubiE/COQ5 methyltransferase family DM611_RS19275 PF02321 Outer membrane efflux protein DM611_RS19280 PF00873 AcrB/AcrD/AcrF family DM611_RS19285 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS19285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS19290 PF00440 Bacterial regulatory proteins, tetR family DM611_RS19290 PF08361 MAATS-type transcriptional repressor, C-terminal region DM611_RS19300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM611_RS19300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM611_RS19305 PF07724 AAA domain (Cdc48 subfamily) DM611_RS19305 PF10431 C-terminal, D2-small domain, of ClpB protein DM611_RS19305 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS19310 PF00227 Proteasome subunit DM611_RS19320 PF00589 Phage integrase family DM611_RS19320 PF02899 Phage integrase, N-terminal SAM-like domain DM611_RS19330 PF01678 Diaminopimelate epimerase DM611_RS19340 PF04304 Protein of unknown function (DUF454) DM611_RS19345 PF00326 Prolyl oligopeptidase family DM611_RS19345 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DM611_RS19350 PF00155 Aminotransferase class I and II DM611_RS19355 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DM611_RS19355 PF00326 Prolyl oligopeptidase family DM611_RS19370 PF00528 Binding-protein-dependent transport system inner membrane component DM611_RS19375 PF00005 ABC transporter DM611_RS19375 PF09383 NIL domain DM611_RS19380 PF00892 EamA-like transporter family DM611_RS19385 PF04461 Protein of unknown function (DUF520) DM611_RS19395 PF00107 Zinc-binding dehydrogenase DM611_RS19395 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS19400 PF00171 Aldehyde dehydrogenase family DM611_RS19415 PF01432 Peptidase family M3 DM611_RS19425 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS19430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM611_RS19445 PF01380 SIS domain DM611_RS19450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS19455 PF00005 ABC transporter DM611_RS19460 PF12704 MacB-like periplasmic core domain DM611_RS19460 PF02687 FtsX-like permease family DM611_RS19460 PF00005 ABC transporter DM611_RS19465 PF12704 MacB-like periplasmic core domain DM611_RS19465 PF02687 FtsX-like permease family DM611_RS19465 PF00005 ABC transporter DM611_RS19475 PF00072 Response regulator receiver domain DM611_RS19475 PF02954 Bacterial regulatory protein, Fis family DM611_RS19475 PF00158 Sigma-54 interaction domain DM611_RS19480 PF00989 PAS fold DM611_RS19480 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS19480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS19490 PF14602 Hexapeptide repeat of succinyl-transferase DM611_RS19490 PF12804 MobA-like NTP transferase domain DM611_RS19490 PF00132 Bacterial transferase hexapeptide (six repeats) DM611_RS19505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DM611_RS19505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DM611_RS19510 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM611_RS19510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM611_RS19515 PF00231 ATP synthase DM611_RS19520 PF00306 ATP synthase alpha/beta chain, C terminal domain DM611_RS19520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM611_RS19520 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM611_RS19525 PF00213 ATP synthase delta (OSCP) subunit DM611_RS19530 PF00430 ATP synthase B/B' CF(0) DM611_RS19535 PF00137 ATP synthase subunit C DM611_RS19540 PF00119 ATP synthase A chain DM611_RS19555 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS19555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM611_RS19560 PF00364 Biotin-requiring enzyme DM611_RS19560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM611_RS19560 PF02817 e3 binding domain DM611_RS19575 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DM611_RS19575 PF01266 FAD dependent oxidoreductase DM611_RS19580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM611_RS19580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM611_RS19585 PF03180 NLPA lipoprotein DM611_RS19605 PF03900 Porphobilinogen deaminase, C-terminal domain DM611_RS19605 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DM611_RS19610 PF00072 Response regulator receiver domain DM611_RS19610 PF04397 LytTr DNA-binding domain DM611_RS19615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS19615 PF06580 Histidine kinase DM611_RS19620 PF02230 Phospholipase/Carboxylesterase DM611_RS19625 PF13632 Glycosyl transferase family group 2 DM611_RS19635 PF00593 TonB dependent receptor DM611_RS19635 PF07715 TonB-dependent Receptor Plug Domain DM611_RS19640 PF10947 Protein of unknown function (DUF2628) DM611_RS19645 PF00672 HAMP domain DM611_RS19645 PF02203 Tar ligand binding domain homologue DM611_RS19645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS19675 PF07690 Major Facilitator Superfamily DM611_RS19695 PF03797 Autotransporter beta-domain DM611_RS19695 PF12951 Passenger-associated-transport-repeat DM611_RS19695 PF00082 Subtilase family DM611_RS19700 PF07690 Major Facilitator Superfamily DM611_RS19705 PF03466 LysR substrate binding domain DM611_RS19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS19710 PF07690 Major Facilitator Superfamily DM611_RS19720 PF07715 TonB-dependent Receptor Plug Domain DM611_RS19720 PF00593 TonB dependent receptor DM611_RS19745 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS19745 PF13417 Glutathione S-transferase, N-terminal domain DM611_RS19760 PF07681 DoxX DM611_RS19765 PF01965 DJ-1/PfpI family DM611_RS19765 PF12833 Helix-turn-helix domain DM611_RS19770 PF00561 alpha/beta hydrolase fold DM611_RS19825 PF04539 Sigma-70 region 3 DM611_RS19825 PF04542 Sigma-70 region 2 DM611_RS19825 PF00140 Sigma-70 factor, region 1.2 DM611_RS19825 PF03979 Sigma-70 factor, region 1.1 DM611_RS19825 PF04545 Sigma-70, region 4 DM611_RS19825 PF04546 Sigma-70, non-essential region DM611_RS19830 PF02580 D-Tyr-tRNA(Tyr) deacylase DM611_RS19840 PF00925 GTP cyclohydrolase II DM611_RS19860 PF00535 Glycosyl transferase family 2 DM611_RS19875 PF01029 NusB family DM611_RS19875 PF01189 16S rRNA methyltransferase RsmB/F DM611_RS19880 PF02911 Formyl transferase, C-terminal domain DM611_RS19880 PF00551 Formyl transferase DM611_RS19885 PF01327 Polypeptide deformylase DM611_RS19895 PF02481 DNA recombination-mediator protein A DM611_RS19895 PF17782 DprA winged helix domain DM611_RS19900 PF04361 Protein of unknown function (DUF494) DM611_RS19905 PF07963 Prokaryotic N-terminal methylation motif DM611_RS19905 PF00114 Pilin (bacterial filament) DM611_RS19910 PF06271 RDD family DM611_RS19915 PF13368 Topoisomerase C-terminal repeat DM611_RS19915 PF01751 Toprim domain DM611_RS19915 PF01131 DNA topoisomerase DM611_RS19920 PF01300 Telomere recombination DM611_RS19945 PF01343 Peptidase family S49 DM611_RS19950 PF01554 MatE DM611_RS19965 PF17764 3′ DNA-binding domain (3′BD) DM611_RS19965 PF00271 Helicase conserved C-terminal domain DM611_RS19965 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DM611_RS19965 PF00270 DEAD/DEAH box helicase DM611_RS19965 PF18074 Primosomal protein N C-terminal domain DM611_RS19970 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS19970 PF13417 Glutathione S-transferase, N-terminal domain DM611_RS19980 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM611_RS19995 PF01541 GIY-YIG catalytic domain DM611_RS20000 PF03458 UPF0126 domain DM611_RS20005 PF00793 DAHP synthetase I family DM611_RS20030 PF01047 MarR family DM611_RS20035 PF00672 HAMP domain DM611_RS20035 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS20035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS20040 PF00072 Response regulator receiver domain DM611_RS20040 PF00486 Transcriptional regulatory protein, C terminal DM611_RS20055 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS20055 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS20060 PF03466 LysR substrate binding domain DM611_RS20060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS20065 PF00118 TCP-1/cpn60 chaperonin family DM611_RS20070 PF00166 Chaperonin 10 Kd subunit DM611_RS20075 PF04231 Endonuclease I DM611_RS20080 PF03091 CutA1 divalent ion tolerance protein DM611_RS20085 PF11412 Disulphide bond corrector protein DsbC DM611_RS20085 PF02683 Cytochrome C biogenesis protein transmembrane region DM611_RS20090 PF08534 Redoxin DM611_RS20095 PF00175 Oxidoreductase NAD-binding domain DM611_RS20095 PF00258 Flavodoxin DM611_RS20095 PF00667 FAD binding domain DM611_RS20100 PF00672 HAMP domain DM611_RS20100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS20100 PF02203 Tar ligand binding domain homologue DM611_RS20105 PF00797 N-acetyltransferase DM611_RS20115 PF00072 Response regulator receiver domain DM611_RS20115 PF00196 Bacterial regulatory proteins, luxR family DM611_RS20120 PF07730 Histidine kinase DM611_RS20130 PF03055 Retinal pigment epithelial membrane protein DM611_RS20140 PF03466 LysR substrate binding domain DM611_RS20140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS20150 PF00245 Alkaline phosphatase DM611_RS20155 PF00768 D-alanyl-D-alanine carboxypeptidase DM611_RS20155 PF07943 Penicillin-binding protein 5, C-terminal domain DM611_RS20165 PF02525 Flavodoxin-like fold DM611_RS20185 PF01220 Dehydroquinase class II DM611_RS20190 PF00364 Biotin-requiring enzyme DM611_RS20195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM611_RS20195 PF00289 Biotin carboxylase, N-terminal domain DM611_RS20195 PF02785 Biotin carboxylase C-terminal domain DM611_RS20220 PF02954 Bacterial regulatory protein, Fis family DM611_RS20230 PF01553 Acyltransferase DM611_RS20240 PF00782 Dual specificity phosphatase, catalytic domain DM611_RS20245 PF12147 Putative methyltransferase DM611_RS20245 PF12146 Serine aminopeptidase, S33 DM611_RS20250 PF01066 CDP-alcohol phosphatidyltransferase DM611_RS20260 PF01808 AICARFT/IMPCHase bienzyme DM611_RS20260 PF02142 MGS-like domain DM611_RS20270 PF02844 Phosphoribosylglycinamide synthetase, N domain DM611_RS20270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DM611_RS20270 PF02843 Phosphoribosylglycinamide synthetase, C domain DM611_RS20285 PF04545 Sigma-70, region 4 DM611_RS20285 PF00140 Sigma-70 factor, region 1.2 DM611_RS20285 PF04542 Sigma-70 region 2 DM611_RS20290 PF03167 Uracil DNA glycosylase superfamily DM611_RS20295 PF00072 Response regulator receiver domain DM611_RS20295 PF01339 CheB methylesterase DM611_RS20300 PF18075 FtsX extracellular domain DM611_RS20305 PF00005 ABC transporter DM611_RS20315 PF00270 DEAD/DEAH box helicase DM611_RS20315 PF00271 Helicase conserved C-terminal domain DM611_RS20315 PF12300 ATP-dependent RNA helicase RhlB DM611_RS20325 PF00085 Thioredoxin DM611_RS20330 PF07498 Rho termination factor, N-terminal domain DM611_RS20330 PF07497 Rho termination factor, RNA-binding domain DM611_RS20330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM611_RS20335 PF07694 5TMR of 5TMR-LYT DM611_RS20335 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS20345 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DM611_RS20370 PF03971 Monomeric isocitrate dehydrogenase DM611_RS20380 PF01476 LysM domain DM611_RS20380 PF04972 BON domain DM611_RS20385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DM611_RS20385 PF14489 QueF-like protein DM611_RS20405 PF01546 Peptidase family M20/M25/M40 DM611_RS20405 PF07687 Peptidase dimerisation domain DM611_RS20410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS20415 PF00873 AcrB/AcrD/AcrF family DM611_RS20420 PF00873 AcrB/AcrD/AcrF family DM611_RS20425 PF12805 FUSC-like inner membrane protein yccS DM611_RS20430 PF00106 short chain dehydrogenase DM611_RS20435 PF07690 Major Facilitator Superfamily DM611_RS20460 PF09297 NADH pyrophosphatase zinc ribbon domain DM611_RS20460 PF00293 NUDIX domain DM611_RS20460 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DM611_RS20465 PF01521 Iron-sulphur cluster biosynthesis DM611_RS20485 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS20485 PF00072 Response regulator receiver domain DM611_RS20485 PF00563 EAL domain DM611_RS20490 PF01627 Hpt domain DM611_RS20490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS20490 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS20490 PF00072 Response regulator receiver domain DM611_RS20490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DM611_RS20490 PF00672 HAMP domain DM611_RS20495 PF00210 Ferritin-like domain DM611_RS20505 PF00293 NUDIX domain DM611_RS20520 PF00380 Ribosomal protein S9/S16 DM611_RS20525 PF00572 Ribosomal protein L13 DM611_RS20530 PF03232 Ubiquinone biosynthesis protein COQ7 DM611_RS20535 PF00893 Small Multidrug Resistance protein DM611_RS20540 PF02675 S-adenosylmethionine decarboxylase DM611_RS20545 PF00027 Cyclic nucleotide-binding domain DM611_RS20545 PF00325 Bacterial regulatory proteins, crp family DM611_RS20550 PF01925 Sulfite exporter TauE/SafE DM611_RS20560 PF00218 Indole-3-glycerol phosphate synthase DM611_RS20565 PF00591 Glycosyl transferase family, a/b domain DM611_RS20565 PF02885 Glycosyl transferase family, helical bundle domain DM611_RS20570 PF00117 Glutamine amidotransferase class-I DM611_RS20580 PF04715 Anthranilate synthase component I, N terminal region DM611_RS20580 PF00425 chorismate binding enzyme DM611_RS20585 PF00781 Diacylglycerol kinase catalytic domain DM611_RS20595 PF00834 Ribulose-phosphate 3 epimerase family DM611_RS20600 PF05099 Tellurite resistance protein TerB DM611_RS20600 PF00226 DnaJ domain DM611_RS20605 PF01259 SAICAR synthetase DM611_RS20615 PF00361 Proton-conducting membrane transporter DM611_RS20615 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DM611_RS20615 PF13244 Domain of unknown function (DUF4040) DM611_RS20615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DM611_RS20620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DM611_RS20625 PF00361 Proton-conducting membrane transporter DM611_RS20630 PF01899 Na+/H+ ion antiporter subunit DM611_RS20635 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DM611_RS20640 PF03334 Na+/H+ antiporter subunit DM611_RS20645 PF01699 Sodium/calcium exchanger protein DM611_RS20660 PF04209 homogentisate 1,2-dioxygenase DM611_RS20665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM611_RS20670 PF01047 MarR family DM611_RS20675 PF06250 YhcG PDDEXK nuclease domain DM611_RS20675 PF17761 DUF1016 N-terminal domain DM611_RS20690 PF00854 POT family DM611_RS20695 PF03301 Tryptophan 2,3-dioxygenase DM611_RS20700 PF00676 Dehydrogenase E1 component DM611_RS20705 PF02780 Transketolase, C-terminal domain DM611_RS20705 PF02779 Transketolase, pyrimidine binding domain DM611_RS20715 PF02817 e3 binding domain DM611_RS20715 PF00364 Biotin-requiring enzyme DM611_RS20715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM611_RS20730 PF13280 WYL domain DM611_RS20730 PF08279 HTH domain DM611_RS20740 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS20745 PF05661 Protein of unknown function (DUF808) DM611_RS20750 PF03109 ABC1 family DM611_RS20755 PF00884 Sulfatase DM611_RS20760 PF12795 Mechanosensitive ion channel porin domain DM611_RS20760 PF00924 Mechanosensitive ion channel DM611_RS20760 PF12794 Mechanosensitive ion channel inner membrane domain 1 DM611_RS20775 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DM611_RS20775 PF01266 FAD dependent oxidoreductase DM611_RS20795 PF00486 Transcriptional regulatory protein, C terminal DM611_RS20795 PF00072 Response regulator receiver domain DM611_RS20800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS20810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DM611_RS20810 PF17944 Arginine decarboxylase C-terminal helical extension DM611_RS20810 PF17810 Arginine decarboxylase helical bundle domain DM611_RS20815 PF17284 Spermidine synthase tetramerisation domain DM611_RS20830 PF00543 Nitrogen regulatory protein P-II DM611_RS20835 PF04380 Membrane fusogenic activity DM611_RS20845 PF01527 Transposase DM611_RS20850 PF13333 Integrase core domain DM611_RS20850 PF13276 HTH-like domain DM611_RS20850 PF00665 Integrase core domain DM611_RS20885 PF03527 RHS protein DM611_RS20885 PF05593 RHS Repeat DM611_RS20890 PF01078 Magnesium chelatase, subunit ChlI DM611_RS20890 PF13335 Magnesium chelatase, subunit ChlI C-terminal DM611_RS20910 PF06055 Exopolysaccharide synthesis, ExoD DM611_RS20915 PF07995 Glucose / Sorbosone dehydrogenase DM611_RS20935 PF00082 Subtilase family DM611_RS20935 PF01483 Proprotein convertase P-domain DM611_RS20945 PF02630 SCO1/SenC DM611_RS20950 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DM611_RS20955 PF00510 Cytochrome c oxidase subunit III DM611_RS20960 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM611_RS20965 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM611_RS20965 PF06481 COX Aromatic Rich Motif DM611_RS20970 PF00155 Aminotransferase class I and II DM611_RS20970 PF00392 Bacterial regulatory proteins, gntR family DM611_RS20985 PF00155 Aminotransferase class I and II DM611_RS20985 PF00392 Bacterial regulatory proteins, gntR family DM611_RS20990 PF00266 Aminotransferase class-V DM611_RS21015 PF04536 TPM domain DM611_RS21035 PF02667 Short chain fatty acid transporter DM611_RS21040 PF01040 UbiA prenyltransferase family DM611_RS21055 PF00595 PDZ domain DM611_RS21065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM611_RS21070 PF00593 TonB dependent receptor DM611_RS21070 PF07715 TonB-dependent Receptor Plug Domain DM611_RS21075 PF16338 Domain of unknown function (DUF4968) DM611_RS21075 PF17137 Domain of unknown function (DUF5110) DM611_RS21075 PF01055 Glycosyl hydrolases family 31 DM611_RS21080 PF01380 SIS domain DM611_RS21085 PF00480 ROK family DM611_RS21090 PF08013 Tagatose 6 phosphate kinase DM611_RS21095 PF08220 DeoR-like helix-turn-helix domain DM611_RS21095 PF00455 DeoR C terminal sensor domain DM611_RS21100 PF01979 Amidohydrolase family DM611_RS21105 PF00083 Sugar (and other) transporter DM611_RS21120 PF00156 Phosphoribosyl transferase domain DM611_RS21125 PF00654 Voltage gated chloride channel DM611_RS21140 PF04055 Radical SAM superfamily DM611_RS21140 PF06968 Biotin and Thiamin Synthesis associated domain DM611_RS21145 PF00155 Aminotransferase class I and II DM611_RS21150 PF12697 Alpha/beta hydrolase family DM611_RS21160 PF13649 Methyltransferase domain DM611_RS21170 PF00291 Pyridoxal-phosphate dependent enzyme DM611_RS21185 PF13932 GidA associated domain DM611_RS21185 PF01134 Glucose inhibited division protein A DM611_RS21190 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DM611_RS21190 PF02321 Outer membrane efflux protein DM611_RS21195 PF00873 AcrB/AcrD/AcrF family DM611_RS21200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS21200 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS21205 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS21205 PF00672 HAMP domain DM611_RS21205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS21210 PF00072 Response regulator receiver domain DM611_RS21210 PF00486 Transcriptional regulatory protein, C terminal DM611_RS21215 PF10127 RNA repair pathway DNA polymerase beta family DM611_RS21220 PF00132 Bacterial transferase hexapeptide (six repeats) DM611_RS21245 PF07726 ATPase family associated with various cellular activities (AAA) DM611_RS21245 PF17863 AAA lid domain DM611_RS21255 PF03738 Glutathionylspermidine synthase preATP-grasp DM611_RS21270 PF00920 Dehydratase family DM611_RS21275 PF04235 Protein of unknown function (DUF418) DM611_RS21280 PF13307 Helicase C-terminal domain DM611_RS21280 PF06733 DEAD_2 DM611_RS21290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DM611_RS21290 PF01488 Shikimate / quinate 5-dehydrogenase DM611_RS21290 PF08501 Shikimate dehydrogenase substrate binding domain DM611_RS21305 PF00490 Delta-aminolevulinic acid dehydratase DM611_RS21310 PF01062 Bestrophin, RFP-TM, chloride channel DM611_RS21335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DM611_RS21335 PF00326 Prolyl oligopeptidase family DM611_RS21340 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS21340 PF02798 Glutathione S-transferase, N-terminal domain DM611_RS21345 PF03350 Uncharacterized protein family, UPF0114 DM611_RS21360 PF12833 Helix-turn-helix domain DM611_RS21360 PF02311 AraC-like ligand binding domain DM611_RS21375 PF00005 ABC transporter DM611_RS21380 PF00561 alpha/beta hydrolase fold DM611_RS21385 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS21395 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DM611_RS21395 PF18416 N-acetylglucosamine binding protein domain 2 DM611_RS21400 PF18416 N-acetylglucosamine binding protein domain 2 DM611_RS21400 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DM611_RS21420 PF13801 Heavy-metal resistance DM611_RS21425 PF08281 Sigma-70, region 4 DM611_RS21425 PF04542 Sigma-70 region 2 DM611_RS21430 PF02321 Outer membrane efflux protein DM611_RS21435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS21440 PF00873 AcrB/AcrD/AcrF family DM611_RS21470 PF02321 Outer membrane efflux protein DM611_RS21475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS21475 PF00529 HlyD membrane-fusion protein of T1SS DM611_RS21480 PF00873 AcrB/AcrD/AcrF family DM611_RS21500 PF07715 TonB-dependent Receptor Plug Domain DM611_RS21500 PF00593 TonB dependent receptor DM611_RS21530 PF00665 Integrase core domain DM611_RS21535 PF01695 IstB-like ATP binding protein DM611_RS21555 PF00111 2Fe-2S iron-sulfur cluster binding domain DM611_RS21555 PF00175 Oxidoreductase NAD-binding domain DM611_RS21555 PF00970 Oxidoreductase FAD-binding domain DM611_RS21560 PF00005 ABC transporter DM611_RS21565 PF01061 ABC-2 type transporter DM611_RS21575 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM611_RS21575 PF02558 Ketopantoate reductase PanE/ApbA DM611_RS21585 PF01026 TatD related DNase DM611_RS21590 PF04408 Helicase associated domain (HA2) DM611_RS21590 PF08482 ATP-dependent helicase C-terminal DM611_RS21590 PF00270 DEAD/DEAH box helicase DM611_RS21590 PF00271 Helicase conserved C-terminal domain DM611_RS21600 PF00849 RNA pseudouridylate synthase DM611_RS21615 PF00248 Aldo/keto reductase family DM611_RS21630 PF01139 tRNA-splicing ligase RtcB DM611_RS21645 PF00672 HAMP domain DM611_RS21645 PF02203 Tar ligand binding domain homologue DM611_RS21645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS21650 PF03466 LysR substrate binding domain DM611_RS21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS21655 PF07690 Major Facilitator Superfamily DM611_RS21660 PF00248 Aldo/keto reductase family DM611_RS21665 PF00561 alpha/beta hydrolase fold DM611_RS21670 PF01906 Putative heavy-metal-binding DM611_RS21675 PF00583 Acetyltransferase (GNAT) family DM611_RS21675 PF13380 CoA binding domain DM611_RS21675 PF13607 Succinyl-CoA ligase like flavodoxin domain DM611_RS21680 PF03448 MgtE intracellular N domain DM611_RS21680 PF01769 Divalent cation transporter DM611_RS21680 PF00571 CBS domain DM611_RS21690 PF00999 Sodium/hydrogen exchanger family DM611_RS21690 PF02254 TrkA-N domain DM611_RS21695 PF12796 Ankyrin repeats (3 copies) DM611_RS21695 PF02661 Fic/DOC family DM611_RS21700 PF05166 YcgL domain DM611_RS21710 PF00109 Beta-ketoacyl synthase, N-terminal domain DM611_RS21710 PF02801 Beta-ketoacyl synthase, C-terminal domain DM611_RS21725 PF00109 Beta-ketoacyl synthase, N-terminal domain DM611_RS21725 PF02801 Beta-ketoacyl synthase, C-terminal domain DM611_RS21735 PF01494 FAD binding domain DM611_RS21755 PF00221 Aromatic amino acid lyase DM611_RS21765 PF00535 Glycosyl transferase family 2 DM611_RS21770 PF07977 FabA-like domain DM611_RS21780 PF00550 Phosphopantetheine attachment site DM611_RS21785 PF00550 Phosphopantetheine attachment site DM611_RS21800 PF02322 Cytochrome bd terminal oxidase subunit II DM611_RS21805 PF01654 Cytochrome bd terminal oxidase subunit I DM611_RS21840 PF04542 Sigma-70 region 2 DM611_RS21840 PF08281 Sigma-70, region 4 DM611_RS21860 PF00293 NUDIX domain DM611_RS21880 PF01218 Coproporphyrinogen III oxidase DM611_RS21890 PF04239 Protein of unknown function (DUF421) DM611_RS21895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DM611_RS21895 PF01367 5'-3' exonuclease, C-terminal SAM fold DM611_RS21895 PF00476 DNA polymerase family A DM611_RS21895 PF01612 3'-5' exonuclease DM611_RS21905 PF06812 ImpA, N-terminal, type VI secretion system DM611_RS21920 PF03793 PASTA domain DM611_RS21920 PF00069 Protein kinase domain DM611_RS21935 PF06744 Type VI secretion protein IcmF C-terminal DM611_RS21935 PF06761 Intracellular multiplication and human macrophage-killing DM611_RS21935 PF14331 ImcF-related N-terminal domain DM611_RS21945 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DM611_RS21960 PF06715 Gp5 C-terminal repeat (3 copies) DM611_RS21960 PF04717 Type VI secretion system, phage-baseplate injector DM611_RS21965 PF03793 PASTA domain DM611_RS21965 PF00069 Protein kinase domain DM611_RS21995 PF00004 ATPase family associated with various cellular activities (AAA) DM611_RS21995 PF07724 AAA domain (Cdc48 subfamily) DM611_RS21995 PF17871 AAA lid domain DM611_RS21995 PF10431 C-terminal, D2-small domain, of ClpB protein DM611_RS22005 PF05947 Type VI secretion system, TssF DM611_RS22010 PF04965 Gene 25-like lysozyme DM611_RS22015 PF07024 ImpE protein DM611_RS22020 PF05638 Type VI secretion system effector, Hcp DM611_RS22025 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DM611_RS22030 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DM611_RS22040 PF00582 Universal stress protein family DM611_RS22060 PF13361 UvrD-like helicase C-terminal domain DM611_RS22060 PF00580 UvrD/REP helicase N-terminal domain DM611_RS22070 PF13091 PLD-like domain DM611_RS22070 PF13396 Phospholipase_D-nuclease N-terminal DM611_RS22075 PF00471 Ribosomal protein L33 DM611_RS22080 PF00830 Ribosomal L28 family DM611_RS22085 PF00929 Exonuclease DM611_RS22090 PF03466 LysR substrate binding domain DM611_RS22090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS22095 PF01042 Endoribonuclease L-PSP DM611_RS22115 PF02321 Outer membrane efflux protein DM611_RS22120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM611_RS22125 PF00873 AcrB/AcrD/AcrF family DM611_RS22140 PF00535 Glycosyl transferase family 2 DM611_RS22145 PF01370 NAD dependent epimerase/dehydratase family DM611_RS22155 PF17762 HTH domain found in ParB protein DM611_RS22155 PF02195 ParB-like nuclease domain DM611_RS22160 PF13614 AAA domain DM611_RS22165 PF02527 rRNA small subunit methyltransferase G DM611_RS22170 PF01648 4'-phosphopantetheinyl transferase superfamily DM611_RS22175 PF04226 Transglycosylase associated protein DM611_RS22185 PF00171 Aldehyde dehydrogenase family DM611_RS22190 PF08946 Osmosensory transporter coiled coil DM611_RS22190 PF00083 Sugar (and other) transporter DM611_RS22200 PF00501 AMP-binding enzyme DM611_RS22200 PF13193 AMP-binding enzyme C-terminal domain DM611_RS22200 PF16177 Acetyl-coenzyme A synthetase N-terminus DM611_RS22205 PF00196 Bacterial regulatory proteins, luxR family DM611_RS22205 PF00072 Response regulator receiver domain DM611_RS22210 PF02659 Putative manganese efflux pump DM611_RS22215 PF00512 His Kinase A (phospho-acceptor) domain DM611_RS22215 PF09456 RcsC Alpha-Beta-Loop (ABL) DM611_RS22215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM611_RS22215 PF00072 Response regulator receiver domain DM611_RS22220 PF10459 Peptidase S46 DM611_RS22225 PF04357 TamB, inner membrane protein subunit of TAM complex DM611_RS22230 PF07244 Surface antigen variable number repeat DM611_RS22230 PF17243 POTRA domain TamA domain 1 DM611_RS22230 PF01103 Surface antigen DM611_RS22235 PF05746 DALR anticodon binding domain DM611_RS22235 PF02092 Glycyl-tRNA synthetase beta subunit DM611_RS22240 PF02091 Glycyl-tRNA synthetase alpha subunit DM611_RS22245 PF00437 Type II/IV secretion system protein DM611_RS22245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DM611_RS22250 PF00117 Glutamine amidotransferase class-I DM611_RS22250 PF00958 GMP synthase C terminal domain DM611_RS22260 PF00902 Sec-independent protein translocase protein (TatC) DM611_RS22265 PF02416 mttA/Hcf106 family DM611_RS22270 PF02416 mttA/Hcf106 family DM611_RS22280 PF00762 Ferrochelatase DM611_RS22285 PF12697 Alpha/beta hydrolase family DM611_RS22290 PF02203 Tar ligand binding domain homologue DM611_RS22290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM611_RS22290 PF00672 HAMP domain DM611_RS22345 PF03594 Benzoate membrane transport protein DM611_RS22355 PF01263 Aldose 1-epimerase DM611_RS22360 PF13406 Transglycosylase SLT domain DM611_RS22365 PF10017 Histidine-specific methyltransferase, SAM-dependent DM611_RS22370 PF12867 DinB superfamily DM611_RS22370 PF03781 Sulfatase-modifying factor enzyme 1 DM611_RS22375 PF00990 Diguanylate cyclase, GGDEF domain DM611_RS22380 PF02810 SEC-C motif DM611_RS22385 PF01925 Sulfite exporter TauE/SafE DM611_RS22405 PF01227 GTP cyclohydrolase I DM611_RS22415 PF07869 Protein of unknown function (DUF1656) DM611_RS22420 PF13533 Biotin-lipoyl like DM611_RS22425 PF02321 Outer membrane efflux protein DM611_RS22430 PF04632 Fusaric acid resistance protein family DM611_RS22440 PF13538 UvrD-like helicase C-terminal domain DM611_RS22445 PF13361 UvrD-like helicase C-terminal domain DM611_RS22445 PF12705 PD-(D/E)XK nuclease superfamily DM611_RS22445 PF00580 UvrD/REP helicase N-terminal domain DM611_RS22450 PF17946 RecC C-terminal domain DM611_RS22455 PF00005 ABC transporter DM611_RS22460 PF02405 Permease MlaE DM611_RS22465 PF02470 MlaD protein DM611_RS22480 PF04333 MlaA lipoprotein DM611_RS22485 PF00255 Glutathione peroxidase DM611_RS22495 PF02646 RmuC family DM611_RS22500 PF00043 Glutathione S-transferase, C-terminal domain DM611_RS22500 PF13417 Glutathione S-transferase, N-terminal domain DM611_RS22505 PF08240 Alcohol dehydrogenase GroES-like domain DM611_RS22505 PF00107 Zinc-binding dehydrogenase DM611_RS22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM611_RS22510 PF03466 LysR substrate binding domain DM611_RS22515 PF01810 LysE type translocator DM611_RS22530 PF13520 Amino acid permease DM611_RS22540 PF17785 PUA-like domain DM611_RS22540 PF10672 S-adenosylmethionine-dependent methyltransferase DM611_RS22545 PF03741 Integral membrane protein TerC family DM611_RS22550 PF01694 Rhomboid family DM611_RS22555 PF03009 Glycerophosphoryl diester phosphodiesterase family DM611_RS22560 PF01926 50S ribosome-binding GTPase DM611_RS22560 PF12631 MnmE helical domain DM611_RS22560 PF10396 GTP-binding protein TrmE N-terminus DM611_RS22570 PF14849 YidC periplasmic domain DM611_RS22570 PF02096 60Kd inner membrane protein DM611_RS22575 PF00825 Ribonuclease P DM611_RS22580 PF00468 Ribosomal protein L34