locus-tag class description LNN95_RS00005 PF00308 Bacterial dnaA protein LNN95_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LNN95_RS00005 PF11638 DnaA N-terminal domain LNN95_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LNN95_RS00010 PF02767 DNA polymerase III beta subunit, central domain LNN95_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LNN95_RS00015 PF02463 RecF/RecN/SMC N terminal domain LNN95_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS00020 PF18053 DNA gyrase B subunit insert domain LNN95_RS00020 PF01751 Toprim domain LNN95_RS00020 PF00204 DNA gyrase B LNN95_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LNN95_RS00030 PF01435 Peptidase family M48 LNN95_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal LNN95_RS00045 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS00050 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS00055 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS00060 PF13091 PLD-like domain LNN95_RS00060 PF13396 Phospholipase_D-nuclease N-terminal LNN95_RS00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LNN95_RS00075 PF04055 Radical SAM superfamily LNN95_RS00085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LNN95_RS00090 PF00155 Aminotransferase class I and II LNN95_RS00095 PF00593 TonB dependent receptor LNN95_RS00095 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS00110 PF02735 Ku70/Ku80 beta-barrel domain LNN95_RS00115 PF04679 ATP dependent DNA ligase C terminal region LNN95_RS00115 PF01068 ATP dependent DNA ligase domain LNN95_RS00115 PF13298 DNA polymerase Ligase (LigD) LNN95_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS00125 PF00107 Zinc-binding dehydrogenase LNN95_RS00130 PF01081 KDPG and KHG aldolase LNN95_RS00140 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS00145 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LNN95_RS00150 PF01037 Lrp/AsnC ligand binding domain LNN95_RS00160 PF01734 Patatin-like phospholipase LNN95_RS00170 PF00593 TonB dependent receptor LNN95_RS00170 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS00175 PF01569 PAP2 superfamily LNN95_RS00190 PF00005 ABC transporter LNN95_RS00205 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LNN95_RS00205 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LNN95_RS00205 PF06827 Zinc finger found in FPG and IleRS LNN95_RS00210 PF04349 Periplasmic glucan biosynthesis protein, MdoG LNN95_RS00215 PF00265 Thymidine kinase LNN95_RS00220 PF00580 UvrD/REP helicase N-terminal domain LNN95_RS00220 PF13361 UvrD-like helicase C-terminal domain LNN95_RS00230 PF04337 Protein of unknown function, DUF480 LNN95_RS00235 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LNN95_RS00240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LNN95_RS00250 PF01553 Acyltransferase LNN95_RS00260 PF01171 PP-loop family LNN95_RS00265 PF04381 Putative exonuclease, RdgC LNN95_RS00280 PF02142 MGS-like domain LNN95_RS00285 PF01627 Hpt domain LNN95_RS00285 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNN95_RS00285 PF00072 Response regulator receiver domain LNN95_RS00285 PF00989 PAS fold LNN95_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS00285 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS00290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LNN95_RS00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS00295 PF04898 Glutamate synthase central domain LNN95_RS00295 PF01645 Conserved region in glutamate synthase LNN95_RS00295 PF01493 GXGXG motif LNN95_RS00295 PF00310 Glutamine amidotransferases class-II LNN95_RS00330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS00330 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS00370 PF00664 ABC transporter transmembrane region LNN95_RS00370 PF00005 ABC transporter LNN95_RS00370 PF03412 Peptidase C39 family LNN95_RS00395 PF00270 DEAD/DEAH box helicase LNN95_RS00395 PF09369 Domain of unknown function (DUF1998) LNN95_RS00395 PF00271 Helicase conserved C-terminal domain LNN95_RS00430 PF01882 Protein of unknown function DUF58 LNN95_RS00435 PF07726 ATPase family associated with various cellular activities (AAA) LNN95_RS00435 PF17863 AAA lid domain LNN95_RS00455 PF01523 Putative modulator of DNA gyrase LNN95_RS00465 PF07804 HipA-like C-terminal domain LNN95_RS00465 PF13657 HipA N-terminal domain LNN95_RS00485 PF01434 Peptidase family M41 LNN95_RS00485 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS00485 PF17862 AAA+ lid domain LNN95_RS00505 PF13091 PLD-like domain LNN95_RS00510 PF03061 Thioesterase superfamily LNN95_RS00535 PF03358 NADPH-dependent FMN reductase LNN95_RS00550 PF02673 Bacitracin resistance protein BacA LNN95_RS00555 PF03951 Glutamine synthetase, beta-Grasp domain LNN95_RS00555 PF00120 Glutamine synthetase, catalytic domain LNN95_RS00560 PF00543 Nitrogen regulatory protein P-II LNN95_RS00565 PF00909 Ammonium Transporter Family LNN95_RS00570 PF01510 N-acetylmuramoyl-L-alanine amidase LNN95_RS00575 PF06725 3D domain LNN95_RS00575 PF03562 MltA specific insert domain LNN95_RS00590 PF00989 PAS fold LNN95_RS00590 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS00590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS00595 PF00072 Response regulator receiver domain LNN95_RS00595 PF02954 Bacterial regulatory protein, Fis family LNN95_RS00595 PF00158 Sigma-54 interaction domain LNN95_RS00600 PF00080 Copper/zinc superoxide dismutase (SODC) LNN95_RS00605 PF00080 Copper/zinc superoxide dismutase (SODC) LNN95_RS00615 PF02803 Thiolase, C-terminal domain LNN95_RS00615 PF00108 Thiolase, N-terminal domain LNN95_RS00650 PF02556 Preprotein translocase subunit SecB LNN95_RS00655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LNN95_RS00655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LNN95_RS00675 PF01758 Sodium Bile acid symporter family LNN95_RS00695 PF03358 NADPH-dependent FMN reductase LNN95_RS00735 PF01758 Sodium Bile acid symporter family LNN95_RS00750 PF03358 NADPH-dependent FMN reductase LNN95_RS00755 PF03960 ArsC family LNN95_RS00765 PF00816 H-NS histone family LNN95_RS00775 PF02028 BCCT, betaine/carnitine/choline family transporter LNN95_RS00780 PF10011 Predicted membrane protein (DUF2254) LNN95_RS00785 PF01925 Sulfite exporter TauE/SafE LNN95_RS00790 PF04273 Putative phosphatase (DUF442) LNN95_RS00790 PF00753 Metallo-beta-lactamase superfamily LNN95_RS00800 PF04143 Sulphur transport LNN95_RS00805 PF00753 Metallo-beta-lactamase superfamily LNN95_RS00900 PF01381 Helix-turn-helix LNN95_RS00920 PF12833 Helix-turn-helix domain LNN95_RS00930 PF04261 Dyp-type peroxidase family LNN95_RS00970 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS00970 PF00072 Response regulator receiver domain LNN95_RS00975 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS00975 PF01627 Hpt domain LNN95_RS00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS00975 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNN95_RS00975 PF00072 Response regulator receiver domain LNN95_RS00975 PF00989 PAS fold LNN95_RS00990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNN95_RS00990 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS00990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS00995 PF00588 SpoU rRNA Methylase family LNN95_RS01005 PF00675 Insulinase (Peptidase family M16) LNN95_RS01005 PF05193 Peptidase M16 inactive domain LNN95_RS01015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LNN95_RS01015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LNN95_RS01020 PF00561 alpha/beta hydrolase fold LNN95_RS01030 PF00501 AMP-binding enzyme LNN95_RS01035 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LNN95_RS01045 PF07478 D-ala D-ala ligase C-terminus LNN95_RS01045 PF01820 D-ala D-ala ligase N-terminus LNN95_RS01055 PF03109 ABC1 family LNN95_RS01060 PF01596 O-methyltransferase LNN95_RS01065 PF04287 tRNA pseudouridine synthase C LNN95_RS01065 PF00849 RNA pseudouridylate synthase LNN95_RS01075 PF00472 RF-1 domain LNN95_RS01085 PF01432 Peptidase family M3 LNN95_RS01100 PF10502 Signal peptidase, peptidase S26 LNN95_RS01105 PF07690 Major Facilitator Superfamily LNN95_RS01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS01110 PF03466 LysR substrate binding domain LNN95_RS01115 PF03466 LysR substrate binding domain LNN95_RS01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS01120 PF01274 Malate synthase LNN95_RS01125 PF00463 Isocitrate lyase family LNN95_RS01130 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS01150 PF00364 Biotin-requiring enzyme LNN95_RS01150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNN95_RS01150 PF00289 Biotin carboxylase, N-terminal domain LNN95_RS01150 PF02785 Biotin carboxylase C-terminal domain LNN95_RS01155 PF01039 Carboxyl transferase domain LNN95_RS01160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS01160 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS01160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNN95_RS01190 PF03969 AFG1-like ATPase LNN95_RS01200 PF03477 ATP cone domain LNN95_RS01200 PF02867 Ribonucleotide reductase, barrel domain LNN95_RS01200 PF00317 Ribonucleotide reductase, all-alpha domain LNN95_RS01205 PF00268 Ribonucleotide reductase, small chain LNN95_RS01210 PF01810 LysE type translocator LNN95_RS01215 PF03061 Thioesterase superfamily LNN95_RS01220 PF02146 Sir2 family LNN95_RS01225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNN95_RS01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS01230 PF03466 LysR substrate binding domain LNN95_RS01235 PF00551 Formyl transferase LNN95_RS01240 PF00857 Isochorismatase family LNN95_RS01245 PF02677 Epoxyqueuosine reductase QueH LNN95_RS01250 PF01734 Patatin-like phospholipase LNN95_RS01255 PF09856 Predicted transcriptional regulator (DUF2083) LNN95_RS01255 PF06114 IrrE N-terminal-like domain LNN95_RS01255 PF01381 Helix-turn-helix LNN95_RS01260 PF00171 Aldehyde dehydrogenase family LNN95_RS01265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS01265 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS01265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNN95_RS01270 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS01275 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS01280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LNN95_RS01280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LNN95_RS01285 PF02566 OsmC-like protein LNN95_RS01295 PF00916 Sulfate permease family LNN95_RS01295 PF01740 STAS domain LNN95_RS01310 PF01207 Dihydrouridine synthase (Dus) LNN95_RS01320 PF00072 Response regulator receiver domain LNN95_RS01320 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS01330 PF06167 Glucose-regulated metallo-peptidase M90 LNN95_RS01340 PF02237 Biotin protein ligase C terminal domain LNN95_RS01340 PF03099 Biotin/lipoate A/B protein ligase family LNN95_RS01340 PF08279 HTH domain LNN95_RS01345 PF03309 Type III pantothenate kinase LNN95_RS01370 PF05973 Phage derived protein Gp49-like (DUF891) LNN95_RS01400 PF00491 Arginase family LNN95_RS01410 PF05532 CsbD-like LNN95_RS01420 PF00579 tRNA synthetases class I (W and Y) LNN95_RS01445 PF00083 Sugar (and other) transporter LNN95_RS01450 PF00892 EamA-like transporter family LNN95_RS01455 PF00892 EamA-like transporter family LNN95_RS01460 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS01460 PF00593 TonB dependent receptor LNN95_RS01465 PF00005 ABC transporter LNN95_RS01465 PF02687 FtsX-like permease family LNN95_RS01465 PF12704 MacB-like periplasmic core domain LNN95_RS01475 PF00005 ABC transporter LNN95_RS01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS01485 PF00005 ABC transporter LNN95_RS01495 PF07730 Histidine kinase LNN95_RS01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS01500 PF00072 Response regulator receiver domain LNN95_RS01500 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS01505 PF01292 Prokaryotic cytochrome b561 LNN95_RS01515 PF02789 Cytosol aminopeptidase family, N-terminal domain LNN95_RS01515 PF00883 Cytosol aminopeptidase family, catalytic domain LNN95_RS01520 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS01530 PF01594 AI-2E family transporter LNN95_RS01550 PF00595 PDZ domain LNN95_RS01550 PF13180 PDZ domain LNN95_RS01565 PF07237 Protein of unknown function (DUF1428) LNN95_RS01570 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LNN95_RS01570 PF00326 Prolyl oligopeptidase family LNN95_RS01580 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS01580 PF00072 Response regulator receiver domain LNN95_RS01595 PF07690 Major Facilitator Superfamily LNN95_RS01600 PF03466 LysR substrate binding domain LNN95_RS01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS01605 PF07308 Protein of unknown function (DUF1456) LNN95_RS01610 PF00106 short chain dehydrogenase LNN95_RS01625 PF03485 Arginyl tRNA synthetase N terminal domain LNN95_RS01625 PF00750 tRNA synthetases class I (R) LNN95_RS01625 PF05746 DALR anticodon binding domain LNN95_RS01630 PF04002 RadC-like JAB domain LNN95_RS01635 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS01635 PF00072 Response regulator receiver domain LNN95_RS01640 PF04127 DNA / pantothenate metabolism flavoprotein LNN95_RS01640 PF02441 Flavoprotein LNN95_RS01645 PF00692 dUTPase LNN95_RS01650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNN95_RS01650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNN95_RS01650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNN95_RS01650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNN95_RS01655 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS01655 PF00072 Response regulator receiver domain LNN95_RS01660 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS01660 PF13492 GAF domain LNN95_RS01660 PF02702 Osmosensitive K+ channel His kinase sensor domain LNN95_RS01660 PF13493 Domain of unknown function (DUF4118) LNN95_RS01665 PF02669 K+-transporting ATPase, c chain LNN95_RS01675 PF03814 Potassium-transporting ATPase A subunit LNN95_RS01690 PF00156 Phosphoribosyl transferase domain LNN95_RS01695 PF03372 Endonuclease/Exonuclease/phosphatase family LNN95_RS01700 PF07690 Major Facilitator Superfamily LNN95_RS01710 PF03702 Anhydro-N-acetylmuramic acid kinase LNN95_RS01715 PF04225 Opacity-associated protein A LysM-like domain LNN95_RS01715 PF01551 Peptidase family M23 LNN95_RS01720 PF00579 tRNA synthetases class I (W and Y) LNN95_RS01780 PF04389 Peptidase family M28 LNN95_RS01790 PF01551 Peptidase family M23 LNN95_RS01795 PF13180 PDZ domain LNN95_RS01795 PF03572 Peptidase family S41 LNN95_RS01810 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LNN95_RS01815 PF04973 Nicotinamide mononucleotide transporter LNN95_RS01820 PF00171 Aldehyde dehydrogenase family LNN95_RS01820 PF01619 Proline dehydrogenase LNN95_RS01820 PF14850 DNA-binding domain of Proline dehydrogenase LNN95_RS01820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LNN95_RS01830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LNN95_RS01830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LNN95_RS01835 PF00115 Cytochrome C and Quinol oxidase polypeptide I LNN95_RS01845 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LNN95_RS01850 PF00510 Cytochrome c oxidase subunit III LNN95_RS01875 PF01040 UbiA prenyltransferase family LNN95_RS01890 PF13593 SBF-like CPA transporter family (DUF4137) LNN95_RS01900 PF08275 DNA primase catalytic core, N-terminal domain LNN95_RS01900 PF10410 DnaB-helicase binding domain of primase LNN95_RS01900 PF08278 DNA primase DnaG DnaB-binding LNN95_RS01900 PF01807 CHC2 zinc finger LNN95_RS01905 PF03631 Virulence factor BrkB LNN95_RS01915 PF01165 Ribosomal protein S21 LNN95_RS01920 PF00814 Glycoprotease family LNN95_RS01930 PF02152 Dihydroneopterin aldolase LNN95_RS01935 PF00924 Mechanosensitive ion channel LNN95_RS01940 PF14310 Fibronectin type III-like domain LNN95_RS01940 PF00933 Glycosyl hydrolase family 3 N terminal domain LNN95_RS01940 PF01915 Glycosyl hydrolase family 3 C-terminal domain LNN95_RS01955 PF07995 Glucose / Sorbosone dehydrogenase LNN95_RS01960 PF05360 yiaA/B two helix domain LNN95_RS01970 PF13520 Amino acid permease LNN95_RS01980 PF01380 SIS domain LNN95_RS01980 PF01418 Helix-turn-helix domain, rpiR family LNN95_RS01985 PF13378 Enolase C-terminal domain-like LNN95_RS01985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LNN95_RS02000 PF00593 TonB dependent receptor LNN95_RS02010 PF01427 D-ala-D-ala dipeptidase LNN95_RS02035 PF07063 Domain of unknown function (DUF1338) LNN95_RS02040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LNN95_RS02040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LNN95_RS02045 PF03710 Glutamate-ammonia ligase adenylyltransferase LNN95_RS02045 PF08335 GlnD PII-uridylyltransferase LNN95_RS02050 PF02592 Putative vitamin uptake transporter LNN95_RS02080 PF00881 Nitroreductase family LNN95_RS02085 PF04264 YceI-like domain LNN95_RS02100 PF08021 Siderophore-interacting FAD-binding domain LNN95_RS02100 PF04954 Siderophore-interacting protein LNN95_RS02105 PF03551 Transcriptional regulator PadR-like family LNN95_RS02110 PF17831 Pyruvate dehydrogenase E1 component middle domain LNN95_RS02110 PF00456 Transketolase, thiamine diphosphate binding domain LNN95_RS02165 PF00350 Dynamin family LNN95_RS02180 PF00271 Helicase conserved C-terminal domain LNN95_RS02180 PF00176 SNF2 family N-terminal domain LNN95_RS02230 PF00561 alpha/beta hydrolase fold LNN95_RS02280 PF16916 Dimerisation domain of Zinc Transporter LNN95_RS02280 PF01545 Cation efflux family LNN95_RS02285 PF02583 Metal-sensitive transcriptional repressor LNN95_RS02295 PF02492 CobW/HypB/UreG, nucleotide-binding domain LNN95_RS02295 PF07683 Cobalamin synthesis protein cobW C-terminal domain LNN95_RS02300 PF00005 ABC transporter LNN95_RS02300 PF12848 ABC transporter LNN95_RS02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS02305 PF03466 LysR substrate binding domain LNN95_RS02310 PF00144 Beta-lactamase LNN95_RS02315 PF07690 Major Facilitator Superfamily LNN95_RS02320 PF12792 CSS motif domain associated with EAL LNN95_RS02320 PF00563 EAL domain LNN95_RS02325 PF00324 Amino acid permease LNN95_RS02330 PF01464 Transglycosylase SLT domain LNN95_RS02355 PF06983 3-demethylubiquinone-9 3-methyltransferase LNN95_RS02365 PF07237 Protein of unknown function (DUF1428) LNN95_RS02370 PF04542 Sigma-70 region 2 LNN95_RS02370 PF08281 Sigma-70, region 4 LNN95_RS02400 PF07694 5TMR of 5TMR-LYT LNN95_RS02400 PF06580 Histidine kinase LNN95_RS02405 PF00072 Response regulator receiver domain LNN95_RS02405 PF04397 LytTr DNA-binding domain LNN95_RS02425 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS02435 PF07690 Major Facilitator Superfamily LNN95_RS02440 PF05649 Peptidase family M13 LNN95_RS02440 PF01431 Peptidase family M13 LNN95_RS02445 PF08448 PAS fold LNN95_RS02445 PF08447 PAS fold LNN95_RS02445 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS02445 PF00563 EAL domain LNN95_RS02450 PF03466 LysR substrate binding domain LNN95_RS02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS02460 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LNN95_RS02465 PF00999 Sodium/hydrogen exchanger family LNN95_RS02490 PF00691 OmpA family LNN95_RS02490 PF13677 Membrane MotB of proton-channel complex MotA/MotB LNN95_RS02495 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS02500 PF01641 SelR domain LNN95_RS02515 PF01037 Lrp/AsnC ligand binding domain LNN95_RS02520 PF01266 FAD dependent oxidoreductase LNN95_RS02525 PF01168 Alanine racemase, N-terminal domain LNN95_RS02525 PF00842 Alanine racemase, C-terminal domain LNN95_RS02535 PF00072 Response regulator receiver domain LNN95_RS02535 PF09308 LuxQ, periplasmic LNN95_RS02535 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS02550 PF05175 Methyltransferase small domain LNN95_RS02550 PF08468 Methyltransferase small domain N-terminal LNN95_RS02555 PF01479 S4 domain LNN95_RS02555 PF00849 RNA pseudouridylate synthase LNN95_RS02560 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS02565 PF00109 Beta-ketoacyl synthase, N-terminal domain LNN95_RS02565 PF02801 Beta-ketoacyl synthase, C-terminal domain LNN95_RS02570 PF07977 FabA-like domain LNN95_RS02575 PF11798 IMS family HHH motif LNN95_RS02575 PF00817 impB/mucB/samB family LNN95_RS02575 PF11799 impB/mucB/samB family C-terminal domain LNN95_RS02590 PF03466 LysR substrate binding domain LNN95_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS02595 PF08241 Methyltransferase domain LNN95_RS02600 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS02605 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS02605 PF00593 TonB dependent receptor LNN95_RS02620 PF13185 GAF domain LNN95_RS02640 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS02640 PF00155 Aminotransferase class I and II LNN95_RS02645 PF01625 Peptide methionine sulfoxide reductase LNN95_RS02650 PF00578 AhpC/TSA family LNN95_RS02650 PF02683 Cytochrome C biogenesis protein transmembrane region LNN95_RS02650 PF17991 Thioredoxin like C-terminal domain LNN95_RS02655 PF01641 SelR domain LNN95_RS02660 PF00072 Response regulator receiver domain LNN95_RS02660 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS02665 PF00672 HAMP domain LNN95_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS02665 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS02665 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB LNN95_RS02665 PF08448 PAS fold LNN95_RS02670 PF00672 HAMP domain LNN95_RS02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS02670 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS02675 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS02675 PF00072 Response regulator receiver domain LNN95_RS02680 PF13537 Glutamine amidotransferase domain LNN95_RS02680 PF00733 Asparagine synthase LNN95_RS02690 PF01242 6-pyruvoyl tetrahydropterin synthase LNN95_RS02695 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS02695 PF00593 TonB dependent receptor LNN95_RS02705 PF00271 Helicase conserved C-terminal domain LNN95_RS02705 PF00270 DEAD/DEAH box helicase LNN95_RS02715 PF14497 Glutathione S-transferase, C-terminal domain LNN95_RS02715 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS02720 PF03167 Uracil DNA glycosylase superfamily LNN95_RS02730 PF00437 Type II/IV secretion system protein LNN95_RS02750 PF00571 CBS domain LNN95_RS02750 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS02755 PF01053 Cys/Met metabolism PLP-dependent enzyme LNN95_RS02765 PF00005 ABC transporter LNN95_RS02770 PF08241 Methyltransferase domain LNN95_RS02775 PF08323 Starch synthase catalytic domain LNN95_RS02775 PF00534 Glycosyl transferases group 1 LNN95_RS02780 PF01370 NAD dependent epimerase/dehydratase family LNN95_RS02805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNN95_RS02805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNN95_RS02805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNN95_RS02810 PF00766 Electron transfer flavoprotein FAD-binding domain LNN95_RS02810 PF01012 Electron transfer flavoprotein domain LNN95_RS02815 PF01012 Electron transfer flavoprotein domain LNN95_RS02820 PF16363 GDP-mannose 4,6 dehydratase LNN95_RS02825 PF00483 Nucleotidyl transferase LNN95_RS02830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LNN95_RS02835 PF04321 RmlD substrate binding domain LNN95_RS02840 PF01050 Mannose-6-phosphate isomerase LNN95_RS02840 PF00483 Nucleotidyl transferase LNN95_RS02845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNN95_RS02845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNN95_RS02845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNN95_RS02845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNN95_RS02850 PF00271 Helicase conserved C-terminal domain LNN95_RS02850 PF00176 SNF2 family N-terminal domain LNN95_RS02850 PF12419 SNF2 Helicase protein LNN95_RS02855 PF01144 Coenzyme A transferase LNN95_RS02860 PF01144 Coenzyme A transferase LNN95_RS02880 PF00005 ABC transporter LNN95_RS02885 PF02405 Permease MlaE LNN95_RS02895 PF00816 H-NS histone family LNN95_RS02900 PF03129 Anticodon binding domain LNN95_RS02900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNN95_RS02900 PF04073 Aminoacyl-tRNA editing domain LNN95_RS02910 PF01066 CDP-alcohol phosphatidyltransferase LNN95_RS02920 PF00583 Acetyltransferase (GNAT) family LNN95_RS02930 PF10458 Valyl tRNA synthetase tRNA binding arm LNN95_RS02930 PF08264 Anticodon-binding domain of tRNA LNN95_RS02930 PF00133 tRNA synthetases class I (I, L, M and V) LNN95_RS02945 PF00883 Cytosol aminopeptidase family, catalytic domain LNN95_RS02945 PF02789 Cytosol aminopeptidase family, N-terminal domain LNN95_RS02955 PF03739 Lipopolysaccharide export system permease LptF/LptG LNN95_RS02970 PF00589 Phage integrase family LNN95_RS02970 PF02899 Phage integrase, N-terminal SAM-like domain LNN95_RS02975 PF10411 Disulfide bond isomerase protein N-terminus LNN95_RS02975 PF13098 Thioredoxin-like domain LNN95_RS02980 PF00553 Cellulose binding domain LNN95_RS02980 PF00041 Fibronectin type III domain LNN95_RS02980 PF00704 Glycosyl hydrolases family 18 LNN95_RS02985 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LNN95_RS02985 PF02769 AIR synthase related protein, C-terminal domain LNN95_RS02985 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LNN95_RS02990 PF13018 Extended Signal Peptide of Type V secretion system LNN95_RS02990 PF03895 YadA-like membrane anchor domain LNN95_RS02990 PF05658 Head domain of trimeric autotransporter adhesin LNN95_RS02990 PF05662 Coiled stalk of trimeric autotransporter adhesin LNN95_RS02995 PF04151 Bacterial pre-peptidase C-terminal domain LNN95_RS02995 PF00082 Subtilase family LNN95_RS03000 PF00437 Type II/IV secretion system protein LNN95_RS03000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LNN95_RS03005 PF00482 Type II secretion system (T2SS), protein F LNN95_RS03010 PF08334 Type II secretion system (T2SS), protein G LNN95_RS03015 PF12019 Type II transport protein GspH LNN95_RS03020 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS03030 PF03934 Type II secretion system (T2SS), protein K LNN95_RS03035 PF05137 Fimbrial assembly protein (PilN) LNN95_RS03040 PF10741 Type II secretion system (T2SS), protein M subtype b LNN95_RS03050 PF03958 Bacterial type II/III secretion system short domain LNN95_RS03050 PF00263 Bacterial type II and III secretion system protein LNN95_RS03080 PF04381 Putative exonuclease, RdgC LNN95_RS03215 PF03237 Terminase-like family LNN95_RS03340 PF00535 Glycosyl transferase family 2 LNN95_RS03345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LNN95_RS03345 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LNN95_RS03355 PF16970 Type-1 fimbrial protein, A LNN95_RS03360 PF02753 Pili assembly chaperone PapD, C-terminal domain LNN95_RS03360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LNN95_RS03365 PF13953 PapC C-terminal domain LNN95_RS03365 PF13954 PapC N-terminal domain LNN95_RS03365 PF00577 Outer membrane usher protein LNN95_RS03375 PF02350 UDP-N-acetylglucosamine 2-epimerase LNN95_RS03385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LNN95_RS03385 PF13632 Glycosyl transferase family group 2 LNN95_RS03400 PF00860 Permease family LNN95_RS03405 PF12848 ABC transporter LNN95_RS03405 PF00005 ABC transporter LNN95_RS03415 PF00464 Serine hydroxymethyltransferase LNN95_RS03430 PF03477 ATP cone domain LNN95_RS03435 PF01872 RibD C-terminal domain LNN95_RS03435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LNN95_RS03455 PF00677 Lumazine binding domain LNN95_RS03460 PF00925 GTP cyclohydrolase II LNN95_RS03460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LNN95_RS03465 PF00885 6,7-dimethyl-8-ribityllumazine synthase LNN95_RS03470 PF01029 NusB family LNN95_RS03475 PF02769 AIR synthase related protein, C-terminal domain LNN95_RS03475 PF00586 AIR synthase related protein, N-terminal domain LNN95_RS03485 PF01565 FAD binding domain LNN95_RS03485 PF02913 FAD linked oxidases, C-terminal domain LNN95_RS03490 PF04307 LexA-binding, inner membrane-associated putative hydrolase LNN95_RS03495 PF02021 Uncharacterised protein family UPF0102 LNN95_RS03505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LNN95_RS03535 PF02381 MraZ protein, putative antitoxin-like LNN95_RS03540 PF01795 MraW methylase family LNN95_RS03545 PF04999 Cell division protein FtsL LNN95_RS03550 PF03717 Penicillin-binding Protein dimerisation domain LNN95_RS03550 PF00905 Penicillin binding protein transpeptidase domain LNN95_RS03555 PF08245 Mur ligase middle domain LNN95_RS03555 PF01225 Mur ligase family, catalytic domain LNN95_RS03555 PF02875 Mur ligase family, glutamate ligase domain LNN95_RS03560 PF08245 Mur ligase middle domain LNN95_RS03560 PF01225 Mur ligase family, catalytic domain LNN95_RS03560 PF02875 Mur ligase family, glutamate ligase domain LNN95_RS03565 PF00953 Glycosyl transferase family 4 LNN95_RS03570 PF01098 Cell cycle protein LNN95_RS03575 PF04101 Glycosyltransferase family 28 C-terminal domain LNN95_RS03575 PF03033 Glycosyltransferase family 28 N-terminal domain LNN95_RS03580 PF08245 Mur ligase middle domain LNN95_RS03580 PF02875 Mur ligase family, glutamate ligase domain LNN95_RS03580 PF01225 Mur ligase family, catalytic domain LNN95_RS03585 PF07478 D-ala D-ala ligase C-terminus LNN95_RS03585 PF01820 D-ala D-ala ligase N-terminus LNN95_RS03590 PF03799 Cell division protein FtsQ LNN95_RS03590 PF08478 POTRA domain, FtsQ-type LNN95_RS03595 PF02491 SHS2 domain inserted in FTSA LNN95_RS03600 PF00091 Tubulin/FtsZ family, GTPase domain LNN95_RS03600 PF12327 FtsZ family, C-terminal domain LNN95_RS03605 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LNN95_RS03615 PF01551 Peptidase family M23 LNN95_RS03615 PF01476 LysM domain LNN95_RS03615 PF08525 Opacity-associated protein A N-terminal motif LNN95_RS03620 PF01043 SecA preprotein cross-linking domain LNN95_RS03620 PF07517 SecA DEAD-like domain LNN95_RS03620 PF02810 SEC-C motif LNN95_RS03620 PF07516 SecA Wing and Scaffold domain LNN95_RS03625 PF00293 NUDIX domain LNN95_RS03635 PF02219 Methylenetetrahydrofolate reductase LNN95_RS03640 PF00561 alpha/beta hydrolase fold LNN95_RS03645 PF07694 5TMR of 5TMR-LYT LNN95_RS03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS03645 PF06580 Histidine kinase LNN95_RS03650 PF04397 LytTr DNA-binding domain LNN95_RS03650 PF00072 Response regulator receiver domain LNN95_RS03655 PF01979 Amidohydrolase family LNN95_RS03675 PF04073 Aminoacyl-tRNA editing domain LNN95_RS03680 PF04607 Region found in RelA / SpoT proteins LNN95_RS03685 PF05221 S-adenosyl-L-homocysteine hydrolase LNN95_RS03685 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LNN95_RS03695 PF00311 Phosphoenolpyruvate carboxylase LNN95_RS03700 PF03061 Thioesterase superfamily LNN95_RS03705 PF02772 S-adenosylmethionine synthetase, central domain LNN95_RS03705 PF02773 S-adenosylmethionine synthetase, C-terminal domain LNN95_RS03705 PF00438 S-adenosylmethionine synthetase, N-terminal domain LNN95_RS03730 PF13847 Methyltransferase domain LNN95_RS03735 PF01207 Dihydrouridine synthase (Dus) LNN95_RS03745 PF00294 pfkB family carbohydrate kinase LNN95_RS03750 PF07662 Na+ dependent nucleoside transporter C-terminus LNN95_RS03750 PF07670 Nucleoside recognition LNN95_RS03750 PF01773 Na+ dependent nucleoside transporter N-terminus LNN95_RS03755 PF00248 Aldo/keto reductase family LNN95_RS03765 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS03765 PF00593 TonB dependent receptor LNN95_RS03800 PF00005 ABC transporter LNN95_RS03805 PF13472 GDSL-like Lipase/Acylhydrolase family LNN95_RS03810 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS03810 PF00072 Response regulator receiver domain LNN95_RS03815 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS03815 PF08521 Two-component sensor kinase N-terminal LNN95_RS03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS03825 PF01219 Prokaryotic diacylglycerol kinase LNN95_RS03830 PF03741 Integral membrane protein TerC family LNN95_RS03835 PF07690 Major Facilitator Superfamily LNN95_RS03840 PF04011 LemA family LNN95_RS03855 PF01790 Prolipoprotein diacylglyceryl transferase LNN95_RS03860 PF00303 Thymidylate synthase LNN95_RS03870 PF00186 Dihydrofolate reductase LNN95_RS03880 PF06940 Domain of unknown function (DUF1287) LNN95_RS03885 PF00149 Calcineurin-like phosphoesterase LNN95_RS03890 PF04379 ApaG domain LNN95_RS03895 PF00398 Ribosomal RNA adenine dimethylase LNN95_RS03900 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LNN95_RS03905 PF00639 PPIC-type PPIASE domain LNN95_RS03905 PF09312 SurA N-terminal domain LNN95_RS03910 PF04453 LPS transport system D LNN95_RS03910 PF03968 OstA-like protein LNN95_RS03915 PF00850 Histone deacetylase domain LNN95_RS03920 PF01923 Cobalamin adenosyltransferase LNN95_RS03930 PF01494 FAD binding domain LNN95_RS03935 PF01494 FAD binding domain LNN95_RS03940 PF13202 EF hand LNN95_RS03940 PF00923 Transaldolase/Fructose-6-phosphate aldolase LNN95_RS03945 PF01728 FtsJ-like methyltransferase LNN95_RS03945 PF18125 RlmM ferredoxin-like domain LNN95_RS03965 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNN95_RS03965 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LNN95_RS03975 PF01625 Peptide methionine sulfoxide reductase LNN95_RS03980 PF00923 Transaldolase/Fructose-6-phosphate aldolase LNN95_RS03985 PF01272 Transcription elongation factor, GreA/GreB, C-term LNN95_RS03985 PF14760 Rnk N-terminus LNN95_RS03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS03990 PF03466 LysR substrate binding domain LNN95_RS03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS03995 PF13192 Thioredoxin domain LNN95_RS04000 PF10417 C-terminal domain of 1-Cys peroxiredoxin LNN95_RS04000 PF00578 AhpC/TSA family LNN95_RS04005 PF05175 Methyltransferase small domain LNN95_RS04005 PF17827 PrmC N-terminal domain LNN95_RS04010 PF00561 alpha/beta hydrolase fold LNN95_RS04015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS04015 PF03466 LysR substrate binding domain LNN95_RS04020 PF07690 Major Facilitator Superfamily LNN95_RS04035 PF00293 NUDIX domain LNN95_RS04040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LNN95_RS04040 PF01612 3'-5' exonuclease LNN95_RS04040 PF00476 DNA polymerase family A LNN95_RS04040 PF01367 5'-3' exonuclease, C-terminal SAM fold LNN95_RS04055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LNN95_RS04055 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LNN95_RS04055 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LNN95_RS04075 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LNN95_RS04080 PF02233 NAD(P) transhydrogenase beta subunit LNN95_RS04090 PF01883 Iron-sulfur cluster assembly protein LNN95_RS04095 PF01063 Amino-transferase class IV LNN95_RS04115 PF00082 Subtilase family LNN95_RS04115 PF04151 Bacterial pre-peptidase C-terminal domain LNN95_RS04130 PF03358 NADPH-dependent FMN reductase LNN95_RS04135 PF03631 Virulence factor BrkB LNN95_RS04140 PF00578 AhpC/TSA family LNN95_RS04145 PF03976 Polyphosphate kinase 2 (PPK2) LNN95_RS04155 PF03462 PCRF domain LNN95_RS04155 PF00472 RF-1 domain LNN95_RS04160 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LNN95_RS04160 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LNN95_RS04160 PF01488 Shikimate / quinate 5-dehydrogenase LNN95_RS04170 PF03550 Outer membrane lipoprotein LolB LNN95_RS04175 PF00288 GHMP kinases N terminal domain LNN95_RS04175 PF08544 GHMP kinases C terminal LNN95_RS04185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LNN95_RS04185 PF14572 Phosphoribosyl synthetase-associated domain LNN95_RS04190 PF14693 Ribosomal protein TL5, C-terminal domain LNN95_RS04190 PF01386 Ribosomal L25p family LNN95_RS04195 PF01195 Peptidyl-tRNA hydrolase LNN95_RS04200 PF06071 Protein of unknown function (DUF933) LNN95_RS04200 PF01926 50S ribosome-binding GTPase LNN95_RS04205 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS04205 PF00593 TonB dependent receptor LNN95_RS04210 PF03575 Peptidase family S51 LNN95_RS04215 PF01112 Asparaginase LNN95_RS04235 PF00009 Elongation factor Tu GTP binding domain LNN95_RS04235 PF03144 Elongation factor Tu domain 2 LNN95_RS04235 PF03143 Elongation factor Tu C-terminal domain LNN95_RS04245 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LNN95_RS04250 PF02357 Transcription termination factor nusG LNN95_RS04250 PF00467 KOW motif LNN95_RS04255 PF00298 Ribosomal protein L11, RNA binding domain LNN95_RS04255 PF03946 Ribosomal protein L11, N-terminal domain LNN95_RS04260 PF00687 Ribosomal protein L1p/L10e family LNN95_RS04265 PF00466 Ribosomal protein L10 LNN95_RS04270 PF00542 Ribosomal protein L7/L12 C-terminal domain LNN95_RS04270 PF16320 Ribosomal protein L7/L12 dimerisation domain LNN95_RS04275 PF04560 RNA polymerase Rpb2, domain 7 LNN95_RS04275 PF04563 RNA polymerase beta subunit LNN95_RS04275 PF04561 RNA polymerase Rpb2, domain 2 LNN95_RS04275 PF10385 RNA polymerase beta subunit external 1 domain LNN95_RS04275 PF00562 RNA polymerase Rpb2, domain 6 LNN95_RS04275 PF04565 RNA polymerase Rpb2, domain 3 LNN95_RS04280 PF04998 RNA polymerase Rpb1, domain 5 LNN95_RS04280 PF05000 RNA polymerase Rpb1, domain 4 LNN95_RS04280 PF04983 RNA polymerase Rpb1, domain 3 LNN95_RS04280 PF00623 RNA polymerase Rpb1, domain 2 LNN95_RS04280 PF04997 RNA polymerase Rpb1, domain 1 LNN95_RS04285 PF00164 Ribosomal protein S12/S23 LNN95_RS04290 PF00177 Ribosomal protein S7p/S5e LNN95_RS04295 PF14492 Elongation Factor G, domain II LNN95_RS04295 PF00679 Elongation factor G C-terminus LNN95_RS04295 PF03764 Elongation factor G, domain IV LNN95_RS04295 PF00009 Elongation factor Tu GTP binding domain LNN95_RS04295 PF03144 Elongation factor Tu domain 2 LNN95_RS04300 PF03143 Elongation factor Tu C-terminal domain LNN95_RS04300 PF03144 Elongation factor Tu domain 2 LNN95_RS04300 PF00009 Elongation factor Tu GTP binding domain LNN95_RS04305 PF00338 Ribosomal protein S10p/S20e LNN95_RS04310 PF00297 Ribosomal protein L3 LNN95_RS04315 PF00573 Ribosomal protein L4/L1 family LNN95_RS04320 PF00276 Ribosomal protein L23 LNN95_RS04325 PF00181 Ribosomal Proteins L2, RNA binding domain LNN95_RS04325 PF03947 Ribosomal Proteins L2, C-terminal domain LNN95_RS04330 PF00203 Ribosomal protein S19 LNN95_RS04335 PF00237 Ribosomal protein L22p/L17e LNN95_RS04340 PF00189 Ribosomal protein S3, C-terminal domain LNN95_RS04340 PF07650 KH domain LNN95_RS04345 PF00252 Ribosomal protein L16p/L10e LNN95_RS04350 PF00831 Ribosomal L29 protein LNN95_RS04355 PF00366 Ribosomal protein S17 LNN95_RS04360 PF00238 Ribosomal protein L14p/L23e LNN95_RS04365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LNN95_RS04365 PF00467 KOW motif LNN95_RS04370 PF00281 Ribosomal protein L5 LNN95_RS04370 PF00673 ribosomal L5P family C-terminus LNN95_RS04375 PF00253 Ribosomal protein S14p/S29e LNN95_RS04380 PF00410 Ribosomal protein S8 LNN95_RS04385 PF00347 Ribosomal protein L6 LNN95_RS04390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LNN95_RS04395 PF00333 Ribosomal protein S5, N-terminal domain LNN95_RS04395 PF03719 Ribosomal protein S5, C-terminal domain LNN95_RS04400 PF00327 Ribosomal protein L30p/L7e LNN95_RS04405 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LNN95_RS04410 PF00344 SecY translocase LNN95_RS04415 PF00416 Ribosomal protein S13/S18 LNN95_RS04420 PF00411 Ribosomal protein S11 LNN95_RS04425 PF01479 S4 domain LNN95_RS04425 PF00163 Ribosomal protein S4/S9 N-terminal domain LNN95_RS04430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LNN95_RS04430 PF01000 RNA polymerase Rpb3/RpoA insert domain LNN95_RS04430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LNN95_RS04435 PF01196 Ribosomal protein L17 LNN95_RS04440 PF02600 Disulfide bond formation protein DsbB LNN95_RS04450 PF01474 Class-II DAHP synthetase family LNN95_RS04465 PF01425 Amidase LNN95_RS04475 PF00679 Elongation factor G C-terminus LNN95_RS04475 PF00009 Elongation factor Tu GTP binding domain LNN95_RS04475 PF03144 Elongation factor Tu domain 2 LNN95_RS04480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LNN95_RS04485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LNN95_RS04485 PF00056 lactate/malate dehydrogenase, NAD binding domain LNN95_RS04490 PF00849 RNA pseudouridylate synthase LNN95_RS04495 PF00501 AMP-binding enzyme LNN95_RS04495 PF16177 Acetyl-coenzyme A synthetase N-terminus LNN95_RS04495 PF13193 AMP-binding enzyme C-terminal domain LNN95_RS04510 PF00043 Glutathione S-transferase, C-terminal domain LNN95_RS04510 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS04520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS04520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNN95_RS04530 PF00107 Zinc-binding dehydrogenase LNN95_RS04530 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS04535 PF05736 OprF membrane domain LNN95_RS04535 PF00691 OmpA family LNN95_RS04545 PF01479 S4 domain LNN95_RS04545 PF00849 RNA pseudouridylate synthase LNN95_RS04555 PF00155 Aminotransferase class I and II LNN95_RS04565 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS04565 PF00107 Zinc-binding dehydrogenase LNN95_RS04570 PF10459 Peptidase S46 LNN95_RS04575 PF00300 Histidine phosphatase superfamily (branch 1) LNN95_RS04580 PF02875 Mur ligase family, glutamate ligase domain LNN95_RS04580 PF08245 Mur ligase middle domain LNN95_RS04595 PF00156 Phosphoribosyl transferase domain LNN95_RS04600 PF04305 Protein of unknown function (DUF455) LNN95_RS04615 PF00149 Calcineurin-like phosphoesterase LNN95_RS04620 PF01569 PAP2 superfamily LNN95_RS04625 PF00534 Glycosyl transferases group 1 LNN95_RS04625 PF13439 Glycosyltransferase Family 4 LNN95_RS04630 PF02541 Ppx/GppA phosphatase family LNN95_RS04635 PF17941 Polyphosphate kinase C-terminal domain 1 LNN95_RS04635 PF13090 Polyphosphate kinase C-terminal domain 2 LNN95_RS04635 PF02503 Polyphosphate kinase middle domain LNN95_RS04635 PF13089 Polyphosphate kinase N-terminal domain LNN95_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS04640 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS04640 PF11808 Phosphate regulon sensor protein PhoR LNN95_RS04640 PF00989 PAS fold LNN95_RS04645 PF00072 Response regulator receiver domain LNN95_RS04645 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS04650 PF01435 Peptidase family M48 LNN95_RS04650 PF07720 Tetratricopeptide repeat LNN95_RS04655 PF00462 Glutaredoxin LNN95_RS04665 PF00180 Isocitrate/isopropylmalate dehydrogenase LNN95_RS04675 PF03466 LysR substrate binding domain LNN95_RS04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS04735 PF05698 Bacterial trigger factor protein (TF) C-terminus LNN95_RS04735 PF05697 Bacterial trigger factor protein (TF) LNN95_RS04740 PF00574 Clp protease LNN95_RS04745 PF07724 AAA domain (Cdc48 subfamily) LNN95_RS04745 PF10431 C-terminal, D2-small domain, of ClpB protein LNN95_RS04745 PF06689 ClpX C4-type zinc finger LNN95_RS04750 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS04750 PF02190 ATP-dependent protease La (LON) substrate-binding domain LNN95_RS04750 PF05362 Lon protease (S16) C-terminal proteolytic domain LNN95_RS04755 PF00216 Bacterial DNA-binding protein LNN95_RS04785 PF05698 Bacterial trigger factor protein (TF) C-terminus LNN95_RS04790 PF05257 CHAP domain LNN95_RS04790 PF01476 LysM domain LNN95_RS04795 PF16123 Hydroxyacylglutathione hydrolase C-terminus LNN95_RS04795 PF00753 Metallo-beta-lactamase superfamily LNN95_RS04805 PF00075 RNase H LNN95_RS04810 PF00929 Exonuclease LNN95_RS04840 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LNN95_RS04850 PF12706 Beta-lactamase superfamily domain LNN95_RS04865 PF00893 Small Multidrug Resistance protein LNN95_RS04915 PF12169 DNA polymerase III subunits gamma and tau domain III LNN95_RS04915 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LNN95_RS04915 PF12170 DNA polymerase III tau subunit V interacting with alpha LNN95_RS04920 PF02575 YbaB/EbfC DNA-binding family LNN95_RS04925 PF13662 Toprim domain LNN95_RS04925 PF02132 RecR protein LNN95_RS04930 PF01230 HIT domain LNN95_RS04940 PF11992 Domain of unknown function (DUF3488) LNN95_RS04940 PF13559 Domain of unknown function (DUF4129) LNN95_RS04940 PF01841 Transglutaminase-like superfamily LNN95_RS04950 PF07726 ATPase family associated with various cellular activities (AAA) LNN95_RS04950 PF17863 AAA lid domain LNN95_RS04960 PF02545 Maf-like protein LNN95_RS04965 PF02620 Large ribosomal RNA subunit accumulation protein YceD LNN95_RS04970 PF01783 Ribosomal L32p protein family LNN95_RS04975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LNN95_RS04975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LNN95_RS04985 PF00698 Acyl transferase domain LNN95_RS04995 PF00550 Phosphopantetheine attachment site LNN95_RS05000 PF00109 Beta-ketoacyl synthase, N-terminal domain LNN95_RS05000 PF02801 Beta-ketoacyl synthase, C-terminal domain LNN95_RS05005 PF00425 chorismate binding enzyme LNN95_RS05005 PF04715 Anthranilate synthase component I, N terminal region LNN95_RS05010 PF02618 YceG-like family LNN95_RS05015 PF02223 Thymidylate kinase LNN95_RS05020 PF09115 DNA polymerase III, delta subunit, C terminal LNN95_RS05080 PF04984 Phage tail sheath protein subtilisin-like domain LNN95_RS05080 PF17482 Phage tail sheath C-terminal domain LNN95_RS05130 PF06737 Transglycosylase-like domain LNN95_RS05190 PF00593 TonB dependent receptor LNN95_RS05190 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS05200 PF07690 Major Facilitator Superfamily LNN95_RS05205 PF00455 DeoR C terminal sensor domain LNN95_RS05205 PF08220 DeoR-like helix-turn-helix domain LNN95_RS05210 PF13599 Pentapeptide repeats (9 copies) LNN95_RS05215 PF13649 Methyltransferase domain LNN95_RS05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS05225 PF03466 LysR substrate binding domain LNN95_RS05230 PF00155 Aminotransferase class I and II LNN95_RS05230 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS05235 PF00892 EamA-like transporter family LNN95_RS05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS05245 PF03466 LysR substrate binding domain LNN95_RS05250 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS05250 PF00593 TonB dependent receptor LNN95_RS05255 PF00672 HAMP domain LNN95_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS05255 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS05260 PF00072 Response regulator receiver domain LNN95_RS05260 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS05265 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS05265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS05270 PF00873 AcrB/AcrD/AcrF family LNN95_RS05290 PF07690 Major Facilitator Superfamily LNN95_RS05295 PF09278 MerR, DNA binding LNN95_RS05295 PF00376 MerR family regulatory protein LNN95_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS05305 PF03466 LysR substrate binding domain LNN95_RS05310 PF14748 Pyrroline-5-carboxylate reductase dimerisation LNN95_RS05310 PF03807 NADP oxidoreductase coenzyme F420-dependent LNN95_RS05315 PF01168 Alanine racemase, N-terminal domain LNN95_RS05320 PF00437 Type II/IV secretion system protein LNN95_RS05325 PF00437 Type II/IV secretion system protein LNN95_RS05330 PF00248 Aldo/keto reductase family LNN95_RS05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS05335 PF03466 LysR substrate binding domain LNN95_RS05350 PF03352 Methyladenine glycosylase LNN95_RS05355 PF13687 Domain of unknown function (DUF4153) LNN95_RS05360 PF02622 Uncharacterized ACR, COG1678 LNN95_RS05365 PF03652 Holliday junction resolvase LNN95_RS05370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LNN95_RS05370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LNN95_RS05390 PF00571 CBS domain LNN95_RS05390 PF01769 Divalent cation transporter LNN95_RS05390 PF03448 MgtE intracellular N domain LNN95_RS05395 PF05524 PEP-utilising enzyme, N-terminal LNN95_RS05395 PF02896 PEP-utilising enzyme, TIM barrel domain LNN95_RS05395 PF00391 PEP-utilising enzyme, mobile domain LNN95_RS05400 PF00381 PTS HPr component phosphorylation site LNN95_RS05410 PF03668 P-loop ATPase protein family LNN95_RS05415 PF07475 HPr Serine kinase C-terminal domain LNN95_RS05415 PF02603 HPr Serine kinase N terminus LNN95_RS05420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNN95_RS05425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LNN95_RS05430 PF04552 Sigma-54, DNA binding domain LNN95_RS05430 PF04963 Sigma-54 factor, core binding domain LNN95_RS05430 PF00309 Sigma-54 factor, Activator interacting domain (AID) LNN95_RS05435 PF12399 Branched-chain amino acid ATP-binding cassette transporter LNN95_RS05435 PF00005 ABC transporter LNN95_RS05455 PF01380 SIS domain LNN95_RS05455 PF00571 CBS domain LNN95_RS05465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LNN95_RS05485 PF00551 Formyl transferase LNN95_RS05505 PF02769 AIR synthase related protein, C-terminal domain LNN95_RS05505 PF00586 AIR synthase related protein, N-terminal domain LNN95_RS05515 PF01594 AI-2E family transporter LNN95_RS05520 PF00308 Bacterial dnaA protein LNN95_RS05530 PF00483 Nucleotidyl transferase LNN95_RS05535 PF01636 Phosphotransferase enzyme family LNN95_RS05540 PF04226 Transglycosylase associated protein LNN95_RS05570 PF00667 FAD binding domain LNN95_RS05570 PF00258 Flavodoxin LNN95_RS05570 PF00175 Oxidoreductase NAD-binding domain LNN95_RS05575 PF02424 ApbE family LNN95_RS05595 PF00593 TonB dependent receptor LNN95_RS05595 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS05605 PF18331 PKHD-type hydroxylase C-terminal domain LNN95_RS05605 PF13640 2OG-Fe(II) oxygenase superfamily LNN95_RS05615 PF00593 TonB dependent receptor LNN95_RS05615 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS05625 PF00355 Rieske [2Fe-2S] domain LNN95_RS05645 PF00266 Aminotransferase class-V LNN95_RS05650 PF01458 Uncharacterized protein family (UPF0051) LNN95_RS05655 PF00005 ABC transporter LNN95_RS05660 PF01458 Uncharacterized protein family (UPF0051) LNN95_RS05665 PF02082 Transcriptional regulator LNN95_RS05675 PF01965 DJ-1/PfpI family LNN95_RS05700 PF02566 OsmC-like protein LNN95_RS05705 PF02567 Phenazine biosynthesis-like protein LNN95_RS05710 PF02567 Phenazine biosynthesis-like protein LNN95_RS05715 PF01842 ACT domain LNN95_RS05715 PF00696 Amino acid kinase family LNN95_RS05725 PF02875 Mur ligase family, glutamate ligase domain LNN95_RS05725 PF08245 Mur ligase middle domain LNN95_RS05740 PF00348 Polyprenyl synthetase LNN95_RS05745 PF00128 Alpha amylase, catalytic domain LNN95_RS05755 PF10566 Glycoside hydrolase 97 LNN95_RS05755 PF14508 Glycosyl-hydrolase 97 N-terminal LNN95_RS05755 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LNN95_RS05765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LNN95_RS05770 PF00128 Alpha amylase, catalytic domain LNN95_RS05770 PF00686 Starch binding domain LNN95_RS05795 PF13732 Domain of unknown function (DUF4162) LNN95_RS05795 PF00005 ABC transporter LNN95_RS05800 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS05810 PF00436 Single-strand binding protein family LNN95_RS05815 PF03466 LysR substrate binding domain LNN95_RS05815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS05835 PF05199 GMC oxidoreductase LNN95_RS05835 PF00732 GMC oxidoreductase LNN95_RS05850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LNN95_RS05860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNN95_RS05860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LNN95_RS05865 PF03825 Nucleoside H+ symporter LNN95_RS05875 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS05880 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS05880 PF00563 EAL domain LNN95_RS05880 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS05890 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS05910 PF13443 Cro/C1-type HTH DNA-binding domain LNN95_RS05915 PF00571 CBS domain LNN95_RS05915 PF03471 Transporter associated domain LNN95_RS05915 PF03741 Integral membrane protein TerC family LNN95_RS05920 PF00149 Calcineurin-like phosphoesterase LNN95_RS05920 PF10518 TAT (twin-arginine translocation) pathway signal sequence LNN95_RS05925 PF01794 Ferric reductase like transmembrane component LNN95_RS05935 PF05114 Protein of unknown function (DUF692) LNN95_RS05945 PF07681 DoxX LNN95_RS05955 PF00578 AhpC/TSA family LNN95_RS05955 PF17991 Thioredoxin like C-terminal domain LNN95_RS05955 PF02683 Cytochrome C biogenesis protein transmembrane region LNN95_RS05960 PF00072 Response regulator receiver domain LNN95_RS05960 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS05965 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS05965 PF00672 HAMP domain LNN95_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS05975 PF08946 Osmosensory transporter coiled coil LNN95_RS05975 PF00083 Sugar (and other) transporter LNN95_RS05980 PF01156 Inosine-uridine preferring nucleoside hydrolase LNN95_RS05995 PF07729 FCD domain LNN95_RS05995 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS06005 PF00698 Acyl transferase domain LNN95_RS06010 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LNN95_RS06015 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LNN95_RS06025 PF01039 Carboxyl transferase domain LNN95_RS06030 PF06857 Malonate decarboxylase delta subunit (MdcD) LNN95_RS06035 PF16957 Malonate decarboxylase, alpha subunit, transporter LNN95_RS06040 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS06040 PF00593 TonB dependent receptor LNN95_RS06040 PF07660 Secretin and TonB N terminus short domain LNN95_RS06045 PF06039 Malate:quinone oxidoreductase (Mqo) LNN95_RS06050 PF13673 Acetyltransferase (GNAT) domain LNN95_RS06055 PF03466 LysR substrate binding domain LNN95_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS06060 PF01810 LysE type translocator LNN95_RS06065 PF00326 Prolyl oligopeptidase family LNN95_RS06070 PF00854 POT family LNN95_RS06080 PF03169 OPT oligopeptide transporter protein LNN95_RS06085 PF07676 WD40-like Beta Propeller Repeat LNN95_RS06085 PF00326 Prolyl oligopeptidase family LNN95_RS06085 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LNN95_RS06100 PF03776 Septum formation topological specificity factor MinE LNN95_RS06105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LNN95_RS06110 PF03775 Septum formation inhibitor MinC, C-terminal domain LNN95_RS06110 PF05209 Septum formation inhibitor MinC, N-terminal domain LNN95_RS06120 PF07730 Histidine kinase LNN95_RS06125 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS06125 PF00072 Response regulator receiver domain LNN95_RS06160 PF01145 SPFH domain / Band 7 family LNN95_RS06160 PF12221 Bacterial membrane protein N terminal LNN95_RS06165 PF01370 NAD dependent epimerase/dehydratase family LNN95_RS06165 PF02222 ATP-grasp domain LNN95_RS06175 PF04376 Arginine-tRNA-protein transferase, N terminus LNN95_RS06175 PF04377 Arginine-tRNA-protein transferase, C terminus LNN95_RS06185 PF04542 Sigma-70 region 2 LNN95_RS06185 PF08281 Sigma-70, region 4 LNN95_RS06200 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS06220 PF17760 UvrA interaction domain LNN95_RS06220 PF17755 UvrA DNA-binding domain LNN95_RS06220 PF00005 ABC transporter LNN95_RS06225 PF00829 Ribosomal prokaryotic L21 protein LNN95_RS06230 PF01016 Ribosomal L27 protein LNN95_RS06235 PF01926 50S ribosome-binding GTPase LNN95_RS06235 PF01018 GTP1/OBG LNN95_RS06240 PF01649 Ribosomal protein S20 LNN95_RS06245 PF03023 Lipid II flippase MurJ LNN95_RS06250 PF06574 FAD synthetase LNN95_RS06250 PF01687 Riboflavin kinase LNN95_RS06255 PF06827 Zinc finger found in FPG and IleRS LNN95_RS06255 PF00133 tRNA synthetases class I (I, L, M and V) LNN95_RS06255 PF08264 Anticodon-binding domain of tRNA LNN95_RS06260 PF01252 Signal peptidase (SPase) II LNN95_RS06265 PF02401 LytB protein LNN95_RS06275 PF07947 YhhN family LNN95_RS06290 PF00593 TonB dependent receptor LNN95_RS06290 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS06310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNN95_RS06310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNN95_RS06325 PF05593 RHS Repeat LNN95_RS06325 PF03527 RHS protein LNN95_RS06360 PF00589 Phage integrase family LNN95_RS06460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LNN95_RS06460 PF06481 COX Aromatic Rich Motif LNN95_RS06465 PF00115 Cytochrome C and Quinol oxidase polypeptide I LNN95_RS06470 PF00510 Cytochrome c oxidase subunit III LNN95_RS06475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LNN95_RS06480 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS06480 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS06480 PF00563 EAL domain LNN95_RS06485 PF18073 Rubredoxin metal binding domain LNN95_RS06490 PF00183 Hsp90 protein LNN95_RS06490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS06510 PF02978 Signal peptide binding domain LNN95_RS06510 PF02881 SRP54-type protein, helical bundle domain LNN95_RS06510 PF00448 SRP54-type protein, GTPase domain LNN95_RS06515 PF03060 Nitronate monooxygenase LNN95_RS06525 PF00886 Ribosomal protein S16 LNN95_RS06530 PF05239 PRC-barrel domain LNN95_RS06530 PF01782 RimM N-terminal domain LNN95_RS06535 PF01746 tRNA (Guanine-1)-methyltransferase LNN95_RS06540 PF01245 Ribosomal protein L19 LNN95_RS06560 PF01554 MatE LNN95_RS06570 PF01479 S4 domain LNN95_RS06585 PF06628 Catalase-related immune-responsive LNN95_RS06585 PF00199 Catalase LNN95_RS06590 PF01624 MutS domain I LNN95_RS06590 PF00488 MutS domain V LNN95_RS06590 PF05190 MutS family domain IV LNN95_RS06590 PF05192 MutS domain III LNN95_RS06590 PF05188 MutS domain II LNN95_RS06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS06610 PF00672 HAMP domain LNN95_RS06615 PF05433 Glycine zipper 2TM domain LNN95_RS06635 PF13533 Biotin-lipoyl like LNN95_RS06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS06645 PF03466 LysR substrate binding domain LNN95_RS06650 PF01810 LysE type translocator LNN95_RS06660 PF00557 Metallopeptidase family M24 LNN95_RS06685 PF00202 Aminotransferase class-III LNN95_RS06695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LNN95_RS06700 PF00892 EamA-like transporter family LNN95_RS06705 PF00892 EamA-like transporter family LNN95_RS06710 PF12146 Serine aminopeptidase, S33 LNN95_RS06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS06715 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS06720 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS06720 PF00072 Response regulator receiver domain LNN95_RS06735 PF00593 TonB dependent receptor LNN95_RS06735 PF07660 Secretin and TonB N terminus short domain LNN95_RS06735 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS06755 PF01638 HxlR-like helix-turn-helix LNN95_RS06760 PF07690 Major Facilitator Superfamily LNN95_RS06765 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS06770 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS06770 PF00593 TonB dependent receptor LNN95_RS06775 PF01545 Cation efflux family LNN95_RS06780 PF04493 Endonuclease V LNN95_RS06785 PF00300 Histidine phosphatase superfamily (branch 1) LNN95_RS06790 PF01431 Peptidase family M13 LNN95_RS06790 PF05649 Peptidase family M13 LNN95_RS06795 PF00072 Response regulator receiver domain LNN95_RS06795 PF01966 HD domain LNN95_RS06800 PF00270 DEAD/DEAH box helicase LNN95_RS06800 PF03461 TRCF domain LNN95_RS06800 PF17757 UvrB interaction domain LNN95_RS06800 PF02559 CarD-like/TRCF domain LNN95_RS06800 PF00271 Helicase conserved C-terminal domain LNN95_RS06810 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LNN95_RS06815 PF00072 Response regulator receiver domain LNN95_RS06815 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS06820 PF00672 HAMP domain LNN95_RS06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS06820 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS06825 PF06123 Inner membrane protein CreD LNN95_RS06835 PF02225 PA domain LNN95_RS06835 PF04389 Peptidase family M28 LNN95_RS06840 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNN95_RS06845 PF01475 Ferric uptake regulator family LNN95_RS06850 PF13533 Biotin-lipoyl like LNN95_RS06865 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS06865 PF00593 TonB dependent receptor LNN95_RS06885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LNN95_RS06885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LNN95_RS06890 PF02805 Metal binding domain of Ada LNN95_RS06890 PF06029 AlkA N-terminal domain LNN95_RS06890 PF00730 HhH-GPD superfamily base excision DNA repair protein LNN95_RS06890 PF12833 Helix-turn-helix domain LNN95_RS06910 PF01494 FAD binding domain LNN95_RS06920 PF00270 DEAD/DEAH box helicase LNN95_RS06920 PF00271 Helicase conserved C-terminal domain LNN95_RS06920 PF03880 DbpA RNA binding domain LNN95_RS06925 PF00563 EAL domain LNN95_RS06925 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS06925 PF08448 PAS fold LNN95_RS06930 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS06930 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS06930 PF00563 EAL domain LNN95_RS06935 PF01479 S4 domain LNN95_RS06935 PF00849 RNA pseudouridylate synthase LNN95_RS06940 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS06945 PF02463 RecF/RecN/SMC N terminal domain LNN95_RS06965 PF00144 Beta-lactamase LNN95_RS06965 PF07930 D-aminopeptidase, domain B LNN95_RS06970 PF00005 ABC transporter LNN95_RS06970 PF00664 ABC transporter transmembrane region LNN95_RS06975 PF00328 Histidine phosphatase superfamily (branch 2) LNN95_RS07000 PF03466 LysR substrate binding domain LNN95_RS07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS07010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LNN95_RS07015 PF03551 Transcriptional regulator PadR-like family LNN95_RS07035 PF03653 Uncharacterised protein family (UPF0093) LNN95_RS07040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LNN95_RS07050 PF01336 OB-fold nucleic acid binding domain LNN95_RS07050 PF07733 Bacterial DNA polymerase III alpha NTPase domain LNN95_RS07050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LNN95_RS07050 PF14579 Helix-hairpin-helix motif LNN95_RS07050 PF02811 PHP domain LNN95_RS07060 PF01351 Ribonuclease HII LNN95_RS07065 PF02684 Lipid-A-disaccharide synthetase LNN95_RS07070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LNN95_RS07070 PF00132 Bacterial transferase hexapeptide (six repeats) LNN95_RS07075 PF07977 FabA-like domain LNN95_RS07080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LNN95_RS07080 PF00132 Bacterial transferase hexapeptide (six repeats) LNN95_RS07085 PF07244 Surface antigen variable number repeat LNN95_RS07085 PF01103 Surface antigen LNN95_RS07090 PF02163 Peptidase family M50 LNN95_RS07090 PF17820 PDZ domain LNN95_RS07095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LNN95_RS07095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LNN95_RS07095 PF13288 DXP reductoisomerase C-terminal domain LNN95_RS07105 PF01255 Putative undecaprenyl diphosphate synthase LNN95_RS07110 PF01765 Ribosome recycling factor LNN95_RS07115 PF00696 Amino acid kinase family LNN95_RS07120 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS07125 PF00889 Elongation factor TS LNN95_RS07130 PF00318 Ribosomal protein S2 LNN95_RS07150 PF13953 PapC C-terminal domain LNN95_RS07150 PF13954 PapC N-terminal domain LNN95_RS07150 PF00577 Outer membrane usher protein LNN95_RS07165 PF00557 Metallopeptidase family M24 LNN95_RS07170 PF01966 HD domain LNN95_RS07170 PF08335 GlnD PII-uridylyltransferase LNN95_RS07170 PF01909 Nucleotidyltransferase domain LNN95_RS07175 PF14602 Hexapeptide repeat of succinyl-transferase LNN95_RS07175 PF00132 Bacterial transferase hexapeptide (six repeats) LNN95_RS07175 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LNN95_RS07185 PF03960 ArsC family LNN95_RS07190 PF07687 Peptidase dimerisation domain LNN95_RS07190 PF01546 Peptidase family M20/M25/M40 LNN95_RS07200 PF00733 Asparagine synthase LNN95_RS07200 PF13537 Glutamine amidotransferase domain LNN95_RS07205 PF00999 Sodium/hydrogen exchanger family LNN95_RS07210 PF01804 Penicillin amidase LNN95_RS07215 PF00210 Ferritin-like domain LNN95_RS07220 PF03989 DNA gyrase C-terminal domain, beta-propeller LNN95_RS07220 PF00521 DNA gyrase/topoisomerase IV, subunit A LNN95_RS07225 PF12833 Helix-turn-helix domain LNN95_RS07235 PF02321 Outer membrane efflux protein LNN95_RS07240 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS07240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS07245 PF07690 Major Facilitator Superfamily LNN95_RS07260 PF03466 LysR substrate binding domain LNN95_RS07260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS07280 PF00773 RNB domain LNN95_RS07280 PF17876 Cold shock domain LNN95_RS07280 PF08461 Ribonuclease R winged-helix domain LNN95_RS07280 PF08206 Ribonuclease B OB domain LNN95_RS07280 PF00575 S1 RNA binding domain LNN95_RS07290 PF00588 SpoU rRNA Methylase family LNN95_RS07290 PF08032 RNA 2'-O ribose methyltransferase substrate binding LNN95_RS07295 PF02321 Outer membrane efflux protein LNN95_RS07300 PF00005 ABC transporter LNN95_RS07300 PF02687 FtsX-like permease family LNN95_RS07300 PF12704 MacB-like periplasmic core domain LNN95_RS07305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS07310 PF00072 Response regulator receiver domain LNN95_RS07310 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS07315 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS07315 PF00672 HAMP domain LNN95_RS07320 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS07330 PF00929 Exonuclease LNN95_RS07335 PF07681 DoxX LNN95_RS07345 PF05114 Protein of unknown function (DUF692) LNN95_RS07355 PF01895 PhoU domain LNN95_RS07360 PF00005 ABC transporter LNN95_RS07365 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS07375 PF12849 PBP superfamily domain LNN95_RS07380 PF12849 PBP superfamily domain LNN95_RS07390 PF00633 Helix-hairpin-helix motif LNN95_RS07390 PF00730 HhH-GPD superfamily base excision DNA repair protein LNN95_RS07390 PF10576 Iron-sulfur binding domain of endonuclease III LNN95_RS07400 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS07405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNN95_RS07405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LNN95_RS07410 PF00293 NUDIX domain LNN95_RS07415 PF00581 Rhodanese-like domain LNN95_RS07430 PF01170 Putative RNA methylase family UPF0020 LNN95_RS07430 PF02926 THUMP domain LNN95_RS07430 PF10672 S-adenosylmethionine-dependent methyltransferase LNN95_RS07450 PF04286 Protein of unknown function (DUF445) LNN95_RS07460 PF00202 Aminotransferase class-III LNN95_RS07465 PF00171 Aldehyde dehydrogenase family LNN95_RS07475 PF07690 Major Facilitator Superfamily LNN95_RS07475 PF00083 Sugar (and other) transporter LNN95_RS07480 PF01814 Hemerythrin HHE cation binding domain LNN95_RS07485 PF00072 Response regulator receiver domain LNN95_RS07485 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS07505 PF01266 FAD dependent oxidoreductase LNN95_RS07515 PF00120 Glutamine synthetase, catalytic domain LNN95_RS07520 PF13416 Bacterial extracellular solute-binding protein LNN95_RS07530 PF00005 ABC transporter LNN95_RS07530 PF08402 TOBE domain LNN95_RS07535 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS07540 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS07545 PF00171 Aldehyde dehydrogenase family LNN95_RS07560 PF03471 Transporter associated domain LNN95_RS07560 PF00571 CBS domain LNN95_RS07575 PF02130 Uncharacterized protein family UPF0054 LNN95_RS07580 PF02562 PhoH-like protein LNN95_RS07590 PF00005 ABC transporter LNN95_RS07600 PF01938 TRAM domain LNN95_RS07600 PF04055 Radical SAM superfamily LNN95_RS07600 PF00919 Uncharacterized protein family UPF0004 LNN95_RS07605 PF13417 Glutathione S-transferase, N-terminal domain LNN95_RS07615 PF01464 Transglycosylase SLT domain LNN95_RS07620 PF00355 Rieske [2Fe-2S] domain LNN95_RS07620 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LNN95_RS07625 PF00032 Cytochrome b(C-terminal)/b6/petD LNN95_RS07625 PF00033 Cytochrome b/b6/petB LNN95_RS07630 PF02167 Cytochrome C1 family LNN95_RS07635 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS07635 PF00043 Glutathione S-transferase, C-terminal domain LNN95_RS07640 PF04386 Stringent starvation protein B LNN95_RS07655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LNN95_RS07655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LNN95_RS07665 PF00731 AIR carboxylase LNN95_RS07670 PF02222 ATP-grasp domain LNN95_RS07670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LNN95_RS07675 PF02627 Carboxymuconolactone decarboxylase family LNN95_RS07680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNN95_RS07680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNN95_RS07685 PF00462 Glutaredoxin LNN95_RS07695 PF00593 TonB dependent receptor LNN95_RS07700 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LNN95_RS07700 PF11892 Domain of unknown function (DUF3412) LNN95_RS07700 PF03641 Possible lysine decarboxylase LNN95_RS07705 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS07705 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LNN95_RS07725 PF05567 Neisseria PilC beta-propeller domain LNN95_RS07745 PF17757 UvrB interaction domain LNN95_RS07745 PF00271 Helicase conserved C-terminal domain LNN95_RS07745 PF04851 Type III restriction enzyme, res subunit LNN95_RS07745 PF02151 UvrB/uvrC motif LNN95_RS07745 PF12344 Ultra-violet resistance protein B LNN95_RS07775 PF06629 MltA-interacting protein MipA LNN95_RS07780 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS07780 PF00072 Response regulator receiver domain LNN95_RS07785 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS07795 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS07800 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS07805 PF00664 ABC transporter transmembrane region LNN95_RS07805 PF00005 ABC transporter LNN95_RS07810 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LNN95_RS07815 PF02348 Cytidylyltransferase LNN95_RS07820 PF01451 Low molecular weight phosphotyrosine protein phosphatase LNN95_RS07830 PF08459 UvrC Helix-hairpin-helix N-terminal LNN95_RS07830 PF02151 UvrB/uvrC motif LNN95_RS07830 PF01541 GIY-YIG catalytic domain LNN95_RS07835 PF01066 CDP-alcohol phosphatidyltransferase LNN95_RS07855 PF00589 Phage integrase family LNN95_RS07855 PF13356 Arm DNA-binding domain LNN95_RS07860 PF00665 Integrase core domain LNN95_RS07865 PF01695 IstB-like ATP binding protein LNN95_RS07880 PF05425 Copper resistance protein D LNN95_RS07885 PF04234 CopC domain LNN95_RS07905 PF05275 Copper resistance protein B precursor (CopB) LNN95_RS07910 PF00394 Multicopper oxidase LNN95_RS07910 PF07731 Multicopper oxidase LNN95_RS07910 PF07732 Multicopper oxidase LNN95_RS07915 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS07915 PF00072 Response regulator receiver domain LNN95_RS07920 PF00672 HAMP domain LNN95_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS07920 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS07925 PF01022 Bacterial regulatory protein, arsR family LNN95_RS07940 PF01758 Sodium Bile acid symporter family LNN95_RS07945 PF03960 ArsC family LNN95_RS07950 PF03551 Transcriptional regulator PadR-like family LNN95_RS08025 PF04002 RadC-like JAB domain LNN95_RS08080 PF12728 Helix-turn-helix domain LNN95_RS08090 PF01434 Peptidase family M41 LNN95_RS08090 PF06480 FtsH Extracellular LNN95_RS08090 PF17862 AAA+ lid domain LNN95_RS08090 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS08200 PF06067 Domain of unknown function (DUF932) LNN95_RS08225 PF00403 Heavy-metal-associated domain LNN95_RS08225 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS08225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNN95_RS08230 PF00403 Heavy-metal-associated domain LNN95_RS08235 PF02411 MerT mercuric transport protein LNN95_RS08240 PF00376 MerR family regulatory protein LNN95_RS08240 PF09278 MerR, DNA binding LNN95_RS08275 PF01252 Signal peptidase (SPase) II LNN95_RS08280 PF00403 Heavy-metal-associated domain LNN95_RS08285 PF13411 MerR HTH family regulatory protein LNN95_RS08300 PF01131 DNA topoisomerase LNN95_RS08300 PF01751 Toprim domain LNN95_RS08305 PF00436 Single-strand binding protein family LNN95_RS08340 PF13614 AAA domain LNN95_RS08365 PF02321 Outer membrane efflux protein LNN95_RS08375 PF02687 FtsX-like permease family LNN95_RS08375 PF12704 MacB-like periplasmic core domain LNN95_RS08375 PF00005 ABC transporter LNN95_RS08410 PF00293 NUDIX domain LNN95_RS08410 PF13344 Haloacid dehalogenase-like hydrolase LNN95_RS08415 PF00583 Acetyltransferase (GNAT) family LNN95_RS08425 PF01613 Flavin reductase like domain LNN95_RS08460 PF03466 LysR substrate binding domain LNN95_RS08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS08465 PF00248 Aldo/keto reductase family LNN95_RS08480 PF02311 AraC-like ligand binding domain LNN95_RS08480 PF12833 Helix-turn-helix domain LNN95_RS08485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LNN95_RS08505 PF13746 4Fe-4S dicluster domain LNN95_RS08505 PF12801 4Fe-4S binding domain LNN95_RS08505 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LNN95_RS08520 PF04055 Radical SAM superfamily LNN95_RS08520 PF06969 HemN C-terminal domain LNN95_RS08535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNN95_RS08535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNN95_RS08535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNN95_RS08540 PF01645 Conserved region in glutamate synthase LNN95_RS08545 PF13673 Acetyltransferase (GNAT) domain LNN95_RS08550 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS08550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LNN95_RS08555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNN95_RS08565 PF00581 Rhodanese-like domain LNN95_RS08565 PF17773 UPF0176 acylphosphatase like domain LNN95_RS08570 PF00296 Luciferase-like monooxygenase LNN95_RS08585 PF00571 CBS domain LNN95_RS08585 PF03471 Transporter associated domain LNN95_RS08585 PF01595 Cyclin M transmembrane N-terminal domain LNN95_RS08595 PF01384 Phosphate transporter family LNN95_RS08610 PF13302 Acetyltransferase (GNAT) domain LNN95_RS08615 PF00204 DNA gyrase B LNN95_RS08615 PF00986 DNA gyrase B subunit, carboxyl terminus LNN95_RS08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS08615 PF01751 Toprim domain LNN95_RS08625 PF06418 CTP synthase N-terminus LNN95_RS08625 PF00117 Glutamine amidotransferase class-I LNN95_RS08630 PF00793 DAHP synthetase I family LNN95_RS08645 PF00113 Enolase, C-terminal TIM barrel domain LNN95_RS08645 PF03952 Enolase, N-terminal domain LNN95_RS08650 PF04977 Septum formation initiator LNN95_RS08655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LNN95_RS08660 PF02542 YgbB family LNN95_RS08665 PF01142 tRNA pseudouridine synthase D (TruD) LNN95_RS08670 PF01713 Smr domain LNN95_RS08675 PF01975 Survival protein SurE LNN95_RS08690 PF01476 LysM domain LNN95_RS08690 PF01551 Peptidase family M23 LNN95_RS08695 PF04430 Protein of unknown function (DUF498/DUF598) LNN95_RS08700 PF01985 CRS1 / YhbY (CRM) domain LNN95_RS08705 PF01728 FtsJ-like methyltransferase LNN95_RS08710 PF17862 AAA+ lid domain LNN95_RS08710 PF06480 FtsH Extracellular LNN95_RS08710 PF01434 Peptidase family M41 LNN95_RS08710 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS08720 PF00809 Pterin binding enzyme LNN95_RS08730 PF17209 Hfq protein LNN95_RS08735 PF16360 GTP-binding GTPase Middle Region LNN95_RS08735 PF13167 GTP-binding GTPase N-terminal LNN95_RS08735 PF01926 50S ribosome-binding GTPase LNN95_RS08740 PF02464 Competence-damaged protein LNN95_RS08745 PF03109 ABC1 family LNN95_RS08750 PF01726 LexA DNA binding domain LNN95_RS08750 PF00717 Peptidase S24-like LNN95_RS08755 PF00154 recA bacterial DNA recombination protein LNN95_RS08760 PF02631 RecX family LNN95_RS08765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNN95_RS08765 PF01411 tRNA synthetases class II (A) LNN95_RS08765 PF02272 DHHA1 domain LNN95_RS08770 PF02599 Global regulator protein family LNN95_RS08795 PF00593 TonB dependent receptor LNN95_RS08795 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS08810 PF00480 ROK family LNN95_RS08825 PF00456 Transketolase, thiamine diphosphate binding domain LNN95_RS08825 PF17831 Pyruvate dehydrogenase E1 component middle domain LNN95_RS08850 PF09423 PhoD-like phosphatase LNN95_RS08850 PF16655 PhoD-like phosphatase, N-terminal domain LNN95_RS08855 PF05506 Domain of unknown function (DUF756) LNN95_RS08855 PF04185 Phosphoesterase family LNN95_RS08860 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS08860 PF00593 TonB dependent receptor LNN95_RS08865 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LNN95_RS08870 PF00034 Cytochrome c LNN95_RS08870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LNN95_RS08880 PF07690 Major Facilitator Superfamily LNN95_RS08890 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS08890 PF07660 Secretin and TonB N terminus short domain LNN95_RS08890 PF00593 TonB dependent receptor LNN95_RS08895 PF02678 Pirin LNN95_RS08895 PF17954 Quercetinase C-terminal cupin domain LNN95_RS08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS08900 PF03466 LysR substrate binding domain LNN95_RS08915 PF08543 Phosphomethylpyrimidine kinase LNN95_RS08915 PF02581 Thiamine monophosphate synthase LNN95_RS08930 PF13638 PIN domain LNN95_RS08930 PF02562 PhoH-like protein LNN95_RS08935 PF00578 AhpC/TSA family LNN95_RS08945 PF00701 Dihydrodipicolinate synthetase family LNN95_RS08955 PF11953 Domain of unknown function (DUF3470) LNN95_RS08955 PF00037 4Fe-4S binding domain LNN95_RS08960 PF00083 Sugar (and other) transporter LNN95_RS08970 PF12626 Polymerase A arginine-rich C-terminus LNN95_RS08970 PF01743 Poly A polymerase head domain LNN95_RS08970 PF12627 Probable RNA and SrmB- binding site of polymerase A LNN95_RS08975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LNN95_RS08980 PF02548 Ketopantoate hydroxymethyltransferase LNN95_RS08985 PF02569 Pantoate-beta-alanine ligase LNN95_RS08995 PF02261 Aspartate decarboxylase LNN95_RS09000 PF00342 Phosphoglucose isomerase LNN95_RS09015 PF02954 Bacterial regulatory protein, Fis family LNN95_RS09015 PF00072 Response regulator receiver domain LNN95_RS09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS09020 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS09025 PF04551 GcpE protein LNN95_RS09030 PF01569 PAP2 superfamily LNN95_RS09035 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS09035 PF00072 Response regulator receiver domain LNN95_RS09040 PF01081 KDPG and KHG aldolase LNN95_RS09045 PF00920 Dehydratase family LNN95_RS09050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LNN95_RS09055 PF02685 Glucokinase LNN95_RS09060 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LNN95_RS09060 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LNN95_RS09065 PF17912 MalK OB fold domain LNN95_RS09065 PF00005 ABC transporter LNN95_RS09080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LNN95_RS09085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LNN95_RS09090 PF00890 FAD binding domain LNN95_RS09090 PF02910 Fumarate reductase flavoprotein C-term LNN95_RS09095 PF13237 4Fe-4S dicluster domain LNN95_RS09095 PF13085 2Fe-2S iron-sulfur cluster binding domain LNN95_RS09100 PF03937 Flavinator of succinate dehydrogenase LNN95_RS09110 PF02687 FtsX-like permease family LNN95_RS09110 PF12704 MacB-like periplasmic core domain LNN95_RS09115 PF00005 ABC transporter LNN95_RS09125 PF04362 Bacterial Fe(2+) trafficking LNN95_RS09130 PF14815 NUDIX domain LNN95_RS09130 PF00730 HhH-GPD superfamily base excision DNA repair protein LNN95_RS09130 PF00633 Helix-hairpin-helix motif LNN95_RS09135 PF02881 SRP54-type protein, helical bundle domain LNN95_RS09135 PF00448 SRP54-type protein, GTPase domain LNN95_RS09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS09145 PF00183 Hsp90 protein LNN95_RS09155 PF01467 Cytidylyltransferase-like LNN95_RS09165 PF00037 4Fe-4S binding domain LNN95_RS09175 PF00753 Metallo-beta-lactamase superfamily LNN95_RS09215 PF00719 Inorganic pyrophosphatase LNN95_RS09220 PF03441 FAD binding domain of DNA photolyase LNN95_RS09220 PF00875 DNA photolyase LNN95_RS09225 PF13488 Glycine zipper LNN95_RS09225 PF00691 OmpA family LNN95_RS09230 PF03466 LysR substrate binding domain LNN95_RS09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS09245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS09250 PF00873 AcrB/AcrD/AcrF family LNN95_RS09255 PF00106 short chain dehydrogenase LNN95_RS09260 PF02321 Outer membrane efflux protein LNN95_RS09290 PF03472 Autoinducer binding domain LNN95_RS09290 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS09300 PF02311 AraC-like ligand binding domain LNN95_RS09300 PF12833 Helix-turn-helix domain LNN95_RS09325 PF00082 Subtilase family LNN95_RS09325 PF04151 Bacterial pre-peptidase C-terminal domain LNN95_RS09350 PF03389 MobA/MobL family LNN95_RS09390 PF12849 PBP superfamily domain LNN95_RS09415 PF01668 SmpB protein LNN95_RS09420 PF03364 Polyketide cyclase / dehydrase and lipid transport LNN95_RS09425 PF03658 RnfH family Ubiquitin LNN95_RS09430 PF04355 SmpA / OmlA family LNN95_RS09435 PF01475 Ferric uptake regulator family LNN95_RS09445 PF03466 LysR substrate binding domain LNN95_RS09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS09450 PF02463 RecF/RecN/SMC N terminal domain LNN95_RS09455 PF01628 HrcA protein C terminal domain LNN95_RS09455 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LNN95_RS09460 PF01025 GrpE LNN95_RS09465 PF00012 Hsp70 protein LNN95_RS09470 PF01556 DnaJ C terminal domain LNN95_RS09470 PF00684 DnaJ central domain LNN95_RS09470 PF00226 DnaJ domain LNN95_RS09475 PF12833 Helix-turn-helix domain LNN95_RS09475 PF02311 AraC-like ligand binding domain LNN95_RS09480 PF07690 Major Facilitator Superfamily LNN95_RS09485 PF08543 Phosphomethylpyrimidine kinase LNN95_RS09490 PF02153 Prephenate dehydrogenase LNN95_RS09490 PF01817 Chorismate mutase type II LNN95_RS09500 PF00664 ABC transporter transmembrane region LNN95_RS09500 PF00005 ABC transporter LNN95_RS09505 PF01205 Uncharacterized protein family UPF0029 LNN95_RS09515 PF04545 Sigma-70, region 4 LNN95_RS09515 PF04542 Sigma-70 region 2 LNN95_RS09520 PF00360 Phytochrome region LNN95_RS09520 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS09520 PF01590 GAF domain LNN95_RS09520 PF00563 EAL domain LNN95_RS09525 PF03641 Possible lysine decarboxylase LNN95_RS09530 PF00202 Aminotransferase class-III LNN95_RS09535 PF02547 Queuosine biosynthesis protein LNN95_RS09540 PF01702 Queuine tRNA-ribosyltransferase LNN95_RS09545 PF02699 Preprotein translocase subunit LNN95_RS09550 PF07549 SecD/SecF GG Motif LNN95_RS09550 PF13721 SecD export protein N-terminal TM region LNN95_RS09550 PF02355 Protein export membrane protein LNN95_RS09555 PF07549 SecD/SecF GG Motif LNN95_RS09555 PF02355 Protein export membrane protein LNN95_RS09560 PF07055 Enoyl reductase FAD binding domain LNN95_RS09560 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LNN95_RS09560 PF12241 Trans-2-enoyl-CoA reductase catalytic region LNN95_RS09565 PF00563 EAL domain LNN95_RS09565 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS09565 PF00072 Response regulator receiver domain LNN95_RS09575 PF07152 YaeQ protein LNN95_RS09580 PF00849 RNA pseudouridylate synthase LNN95_RS09585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LNN95_RS09590 PF00313 'Cold-shock' DNA-binding domain LNN95_RS09595 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS09600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LNN95_RS09605 PF00156 Phosphoribosyl transferase domain LNN95_RS09610 PF03880 DbpA RNA binding domain LNN95_RS09610 PF00270 DEAD/DEAH box helicase LNN95_RS09610 PF00271 Helicase conserved C-terminal domain LNN95_RS09615 PF03601 Conserved hypothetical protein 698 LNN95_RS09620 PF03466 LysR substrate binding domain LNN95_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS09625 PF16326 ABC transporter C-terminal domain LNN95_RS09625 PF12848 ABC transporter LNN95_RS09625 PF00005 ABC transporter LNN95_RS09630 PF00034 Cytochrome c LNN95_RS09640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS09645 PF00873 AcrB/AcrD/AcrF family LNN95_RS09650 PF00873 AcrB/AcrD/AcrF family LNN95_RS09665 PF00795 Carbon-nitrogen hydrolase LNN95_RS09670 PF04371 Porphyromonas-type peptidyl-arginine deiminase LNN95_RS09680 PF00444 Ribosomal protein L36 LNN95_RS09685 PF02224 Cytidylate kinase LNN95_RS09690 PF00575 S1 RNA binding domain LNN95_RS09695 PF00216 Bacterial DNA-binding protein LNN95_RS09705 PF18073 Rubredoxin metal binding domain LNN95_RS09710 PF00953 Glycosyl transferase family 4 LNN95_RS09715 PF02719 Polysaccharide biosynthesis protein LNN95_RS09720 PF00483 Nucleotidyl transferase LNN95_RS09725 PF02803 Thiolase, C-terminal domain LNN95_RS09725 PF00108 Thiolase, N-terminal domain LNN95_RS09730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNN95_RS09730 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS09730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNN95_RS09740 PF00334 Nucleoside diphosphate kinase LNN95_RS09745 PF04055 Radical SAM superfamily LNN95_RS09755 PF13464 Domain of unknown function (DUF4115) LNN95_RS09760 PF09976 Tetratricopeptide repeat-like domain LNN95_RS09765 PF01011 PQQ enzyme repeat LNN95_RS09765 PF13360 PQQ-like domain LNN95_RS09770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LNN95_RS09770 PF01926 50S ribosome-binding GTPase LNN95_RS09790 PF00899 ThiF family LNN95_RS09795 PF02254 TrkA-N domain LNN95_RS09795 PF00999 Sodium/hydrogen exchanger family LNN95_RS09800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LNN95_RS09800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LNN95_RS09805 PF00571 CBS domain LNN95_RS09805 PF00478 IMP dehydrogenase / GMP reductase domain LNN95_RS09815 PF00117 Glutamine amidotransferase class-I LNN95_RS09815 PF00958 GMP synthase C terminal domain LNN95_RS09815 PF02540 NAD synthase LNN95_RS09835 PF13361 UvrD-like helicase C-terminal domain LNN95_RS09835 PF00580 UvrD/REP helicase N-terminal domain LNN95_RS09840 PF01555 DNA methylase LNN95_RS09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS09855 PF03466 LysR substrate binding domain LNN95_RS09875 PF00106 short chain dehydrogenase LNN95_RS09890 PF01022 Bacterial regulatory protein, arsR family LNN95_RS09905 PF06100 MCRA family LNN95_RS09920 PF01965 DJ-1/PfpI family LNN95_RS09930 PF03358 NADPH-dependent FMN reductase LNN95_RS09940 PF00296 Luciferase-like monooxygenase LNN95_RS09945 PF00296 Luciferase-like monooxygenase LNN95_RS09950 PF01546 Peptidase family M20/M25/M40 LNN95_RS09950 PF07687 Peptidase dimerisation domain LNN95_RS09955 PF00583 Acetyltransferase (GNAT) family LNN95_RS09965 PF00005 ABC transporter LNN95_RS09970 PF00497 Bacterial extracellular solute-binding proteins, family 3 LNN95_RS09980 PF12706 Beta-lactamase superfamily domain LNN95_RS09985 PF08361 MAATS-type transcriptional repressor, C-terminal region LNN95_RS09985 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS09990 PF12792 CSS motif domain associated with EAL LNN95_RS09990 PF00563 EAL domain LNN95_RS09995 PF00106 short chain dehydrogenase LNN95_RS10005 PF01636 Phosphotransferase enzyme family LNN95_RS10015 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS10015 PF17932 Tetracyclin repressor-like, C-terminal domain LNN95_RS10030 PF00892 EamA-like transporter family LNN95_RS10035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LNN95_RS10035 PF01565 FAD binding domain LNN95_RS10040 PF01180 Dihydroorotate dehydrogenase LNN95_RS10060 PF00171 Aldehyde dehydrogenase family LNN95_RS10065 PF02397 Bacterial sugar transferase LNN95_RS10070 PF01451 Low molecular weight phosphotyrosine protein phosphatase LNN95_RS10075 PF06082 Exopolysaccharide biosynthesis protein YbjH LNN95_RS10090 PF02563 Polysaccharide biosynthesis/export protein LNN95_RS10090 PF10531 SLBB domain LNN95_RS10090 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LNN95_RS10100 PF01569 PAP2 superfamily LNN95_RS10110 PF00701 Dihydrodipicolinate synthetase family LNN95_RS10140 PF00072 Response regulator receiver domain LNN95_RS10140 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS10145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10145 PF13426 PAS domain LNN95_RS10145 PF00072 Response regulator receiver domain LNN95_RS10150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LNN95_RS10150 PF00672 HAMP domain LNN95_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10150 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS10150 PF01627 Hpt domain LNN95_RS10150 PF00072 Response regulator receiver domain LNN95_RS10155 PF03705 CheR methyltransferase, all-alpha domain LNN95_RS10155 PF01739 CheR methyltransferase, SAM binding domain LNN95_RS10160 PF01339 CheB methylesterase LNN95_RS10165 PF00672 HAMP domain LNN95_RS10165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10165 PF18698 Histidine kinase sensor domain LNN95_RS10165 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS10165 PF00989 PAS fold LNN95_RS10215 PF00696 Amino acid kinase family LNN95_RS10215 PF03447 Homoserine dehydrogenase, NAD binding domain LNN95_RS10215 PF00742 Homoserine dehydrogenase LNN95_RS10215 PF13840 ACT domain LNN95_RS10215 PF01842 ACT domain LNN95_RS10220 PF08544 GHMP kinases C terminal LNN95_RS10220 PF00288 GHMP kinases N terminal domain LNN95_RS10225 PF14821 Threonine synthase N terminus LNN95_RS10225 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS10230 PF13545 Crp-like helix-turn-helix domain LNN95_RS10230 PF00027 Cyclic nucleotide-binding domain LNN95_RS10235 PF13393 Histidyl-tRNA synthetase LNN95_RS10235 PF03129 Anticodon binding domain LNN95_RS10250 PF08029 HisG, C-terminal domain LNN95_RS10250 PF01634 ATP phosphoribosyltransferase LNN95_RS10255 PF00815 Histidinol dehydrogenase LNN95_RS10260 PF00155 Aminotransferase class I and II LNN95_RS10265 PF08645 Polynucleotide kinase 3 phosphatase LNN95_RS10265 PF00475 Imidazoleglycerol-phosphate dehydratase LNN95_RS10270 PF00117 Glutamine amidotransferase class-I LNN95_RS10275 PF00977 Histidine biosynthesis protein LNN95_RS10280 PF00977 Histidine biosynthesis protein LNN95_RS10285 PF01502 Phosphoribosyl-AMP cyclohydrolase LNN95_RS10285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LNN95_RS10300 PF02685 Glucokinase LNN95_RS10305 PF01112 Asparaginase LNN95_RS10310 PF03932 CutC family LNN95_RS10315 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS10315 PF00593 TonB dependent receptor LNN95_RS10320 PF00403 Heavy-metal-associated domain LNN95_RS10325 PF09278 MerR, DNA binding LNN95_RS10325 PF00376 MerR family regulatory protein LNN95_RS10340 PF17678 Glycosyl hydrolase family 92 N-terminal domain LNN95_RS10340 PF07971 Glycosyl hydrolase family 92 LNN95_RS10345 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS10350 PF07690 Major Facilitator Superfamily LNN95_RS10355 PF00294 pfkB family carbohydrate kinase LNN95_RS10375 PF03079 ARD/ARD' family LNN95_RS10380 PF00596 Class II Aldolase and Adducin N-terminal domain LNN95_RS10385 PF13520 Amino acid permease LNN95_RS10390 PF13520 Amino acid permease LNN95_RS10400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNN95_RS10400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNN95_RS10405 PF01565 FAD binding domain LNN95_RS10405 PF02913 FAD linked oxidases, C-terminal domain LNN95_RS10420 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10420 PF00672 HAMP domain LNN95_RS10425 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS10425 PF00072 Response regulator receiver domain LNN95_RS10430 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS10430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS10435 PF00873 AcrB/AcrD/AcrF family LNN95_RS10450 PF09285 Elongation factor P, C-terminal LNN95_RS10450 PF08207 Elongation factor P (EF-P) KOW-like domain LNN95_RS10450 PF01132 Elongation factor P (EF-P) OB domain LNN95_RS10455 PF00106 short chain dehydrogenase LNN95_RS10460 PF00682 HMGL-like LNN95_RS10470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNN95_RS10470 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS10470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNN95_RS10480 PF07670 Nucleoside recognition LNN95_RS10480 PF02421 Ferrous iron transport protein B LNN95_RS10480 PF07664 Ferrous iron transport protein B C terminus LNN95_RS10495 PF02525 Flavodoxin-like fold LNN95_RS10505 PF00106 short chain dehydrogenase LNN95_RS10510 PF01113 Dihydrodipicolinate reductase, N-terminus LNN95_RS10510 PF05173 Dihydrodipicolinate reductase, C-terminus LNN95_RS10515 PF00117 Glutamine amidotransferase class-I LNN95_RS10515 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LNN95_RS10520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LNN95_RS10520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNN95_RS10520 PF02142 MGS-like domain LNN95_RS10525 PF01272 Transcription elongation factor, GreA/GreB, C-term LNN95_RS10525 PF03449 Transcription elongation factor, N-terminal LNN95_RS10545 PF02272 DHHA1 domain LNN95_RS10545 PF01368 DHH family LNN95_RS10545 PF17768 RecJ OB domain LNN95_RS10550 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) LNN95_RS10565 PF04397 LytTr DNA-binding domain LNN95_RS10580 PF00171 Aldehyde dehydrogenase family LNN95_RS10585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNN95_RS10585 PF00205 Thiamine pyrophosphate enzyme, central domain LNN95_RS10585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNN95_RS10590 PF01336 OB-fold nucleic acid binding domain LNN95_RS10590 PF00152 tRNA synthetases class II (D, K and N) LNN95_RS10595 PF00072 Response regulator receiver domain LNN95_RS10600 PF00072 Response regulator receiver domain LNN95_RS10600 PF01627 Hpt domain LNN95_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10600 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS10605 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS10610 PF00501 AMP-binding enzyme LNN95_RS10610 PF13193 AMP-binding enzyme C-terminal domain LNN95_RS10615 PF00732 GMC oxidoreductase LNN95_RS10615 PF05199 GMC oxidoreductase LNN95_RS10620 PF00171 Aldehyde dehydrogenase family LNN95_RS10625 PF13977 BetI-type transcriptional repressor, C-terminal LNN95_RS10625 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS10630 PF02028 BCCT, betaine/carnitine/choline family transporter LNN95_RS10635 PF00330 Aconitase family (aconitate hydratase) LNN95_RS10635 PF00694 Aconitase C-terminal domain LNN95_RS10650 PF00330 Aconitase family (aconitate hydratase) LNN95_RS10650 PF06434 Aconitate hydratase 2 N-terminus LNN95_RS10650 PF11791 Aconitate B N-terminal domain LNN95_RS10655 PF01339 CheB methylesterase LNN95_RS10655 PF00072 Response regulator receiver domain LNN95_RS10660 PF03975 CheD chemotactic sensory transduction LNN95_RS10665 PF01739 CheR methyltransferase, SAM binding domain LNN95_RS10665 PF03705 CheR methyltransferase, all-alpha domain LNN95_RS10670 PF02203 Tar ligand binding domain homologue LNN95_RS10670 PF00672 HAMP domain LNN95_RS10670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS10680 PF02203 Tar ligand binding domain homologue LNN95_RS10680 PF00672 HAMP domain LNN95_RS10680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS10690 PF01584 CheW-like domain LNN95_RS10695 PF07238 PilZ domain LNN95_RS10695 PF07317 Flagellar regulator YcgR LNN95_RS10700 PF02203 Tar ligand binding domain homologue LNN95_RS10700 PF00672 HAMP domain LNN95_RS10700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS10705 PF02895 Signal transducing histidine kinase, homodimeric domain LNN95_RS10705 PF09078 CheY binding LNN95_RS10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10705 PF01627 Hpt domain LNN95_RS10705 PF01584 CheW-like domain LNN95_RS10710 PF00072 Response regulator receiver domain LNN95_RS10720 PF01584 CheW-like domain LNN95_RS10725 PF13614 AAA domain LNN95_RS10730 PF13677 Membrane MotB of proton-channel complex MotA/MotB LNN95_RS10730 PF00691 OmpA family LNN95_RS10735 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS10740 PF00072 Response regulator receiver domain LNN95_RS10740 PF01627 Hpt domain LNN95_RS10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10740 PF02895 Signal transducing histidine kinase, homodimeric domain LNN95_RS10740 PF01584 CheW-like domain LNN95_RS10745 PF04344 Chemotaxis phosphatase, CheZ LNN95_RS10750 PF00072 Response regulator receiver domain LNN95_RS10755 PF04542 Sigma-70 region 2 LNN95_RS10755 PF04539 Sigma-70 region 3 LNN95_RS10755 PF04545 Sigma-70, region 4 LNN95_RS10760 PF10609 NUBPL iron-transfer P-loop NTPase LNN95_RS10765 PF00448 SRP54-type protein, GTPase domain LNN95_RS10770 PF00771 FHIPEP family LNN95_RS10775 PF01312 FlhB HrpN YscU SpaS Family LNN95_RS10780 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS10780 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS10780 PF00563 EAL domain LNN95_RS10785 PF01311 Bacterial export proteins, family 1 LNN95_RS10790 PF01313 Bacterial export proteins, family 3 LNN95_RS10795 PF00813 FliP family LNN95_RS10800 PF04347 Flagellar biosynthesis protein, FliO LNN95_RS10805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNN95_RS10810 PF02154 Flagellar motor switch protein FliM LNN95_RS10810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LNN95_RS10830 PF18269 T3SS EscN ATPase C-terminal domain LNN95_RS10830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNN95_RS10840 PF14841 FliG middle domain LNN95_RS10840 PF01706 FliG C-terminal domain LNN95_RS10840 PF14842 FliG N-terminal domain LNN95_RS10845 PF01514 Secretory protein of YscJ/FliF family LNN95_RS10845 PF08345 Flagellar M-ring protein C-terminal LNN95_RS10850 PF02049 Flagellar hook-basal body complex protein FliE LNN95_RS10855 PF06490 Flagellar regulatory protein FleQ LNN95_RS10855 PF02954 Bacterial regulatory protein, Fis family LNN95_RS10855 PF00158 Sigma-54 interaction domain LNN95_RS10860 PF00072 Response regulator receiver domain LNN95_RS10860 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS10865 PF04552 Sigma-54, DNA binding domain LNN95_RS10865 PF04963 Sigma-54 factor, core binding domain LNN95_RS10865 PF00309 Sigma-54 factor, Activator interacting domain (AID) LNN95_RS10870 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS10870 PF00072 Response regulator receiver domain LNN95_RS10885 PF02561 Flagellar protein FliS LNN95_RS10890 PF07196 Flagellin hook IN motif LNN95_RS10890 PF07195 Flagellar hook-associated protein 2 C-terminus LNN95_RS10890 PF02465 Flagellar hook-associated protein 2 N-terminus LNN95_RS10895 PF00700 Bacterial flagellin C-terminal helical region LNN95_RS10895 PF08884 Flagellin D3 domain LNN95_RS10895 PF00669 Bacterial flagellin N-terminal helical region LNN95_RS10915 PF00460 Flagella basal body rod protein LNN95_RS10915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNN95_RS10920 PF10135 Rod binding protein LNN95_RS10920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LNN95_RS10925 PF02119 Flagellar P-ring protein LNN95_RS10930 PF02107 Flagellar L-ring protein LNN95_RS10935 PF00460 Flagella basal body rod protein LNN95_RS10935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNN95_RS10940 PF00460 Flagella basal body rod protein LNN95_RS10940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNN95_RS10945 PF07559 Flagellar basal body protein FlaE LNN95_RS10945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNN95_RS10945 PF00460 Flagella basal body rod protein LNN95_RS10955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LNN95_RS10955 PF00460 Flagella basal body rod protein LNN95_RS10960 PF00460 Flagella basal body rod protein LNN95_RS10965 PF01584 CheW-like domain LNN95_RS10965 PF00072 Response regulator receiver domain LNN95_RS10985 PF13188 PAS domain LNN95_RS10985 PF13426 PAS domain LNN95_RS10985 PF00989 PAS fold LNN95_RS10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10985 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS10990 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS10990 PF00563 EAL domain LNN95_RS10990 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS10995 PF07730 Histidine kinase LNN95_RS11000 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS11000 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS11000 PF00563 EAL domain LNN95_RS11015 PF12729 Four helix bundle sensory module for signal transduction LNN95_RS11015 PF00672 HAMP domain LNN95_RS11015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS11020 PF04356 Protein of unknown function (DUF489) LNN95_RS11030 PF00293 NUDIX domain LNN95_RS11040 PF02617 ATP-dependent Clp protease adaptor protein ClpS LNN95_RS11045 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LNN95_RS11050 PF07724 AAA domain (Cdc48 subfamily) LNN95_RS11050 PF17871 AAA lid domain LNN95_RS11050 PF02861 Clp amino terminal domain, pathogenicity island component LNN95_RS11050 PF10431 C-terminal, D2-small domain, of ClpB protein LNN95_RS11050 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS11065 PF01176 Translation initiation factor 1A / IF-1 LNN95_RS11070 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LNN95_RS11085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS11090 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LNN95_RS11090 PF17854 FtsK alpha domain LNN95_RS11090 PF09397 Ftsk gamma domain LNN95_RS11090 PF01580 FtsK/SpoIIIE family LNN95_RS11100 PF03548 Outer membrane lipoprotein carrier protein LolA LNN95_RS11105 PF16193 AAA C-terminal domain LNN95_RS11105 PF12002 MgsA AAA+ ATPase C terminal LNN95_RS11105 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS11125 PF00756 Putative esterase LNN95_RS11135 PF01497 Periplasmic binding protein LNN95_RS11140 PF01032 FecCD transport family LNN95_RS11145 PF00005 ABC transporter LNN95_RS11155 PF03144 Elongation factor Tu domain 2 LNN95_RS11155 PF00009 Elongation factor Tu GTP binding domain LNN95_RS11155 PF14492 Elongation Factor G, domain II LNN95_RS11155 PF00679 Elongation factor G C-terminus LNN95_RS11155 PF03764 Elongation factor G, domain IV LNN95_RS11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS11170 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS11170 PF09308 LuxQ, periplasmic LNN95_RS11170 PF00072 Response regulator receiver domain LNN95_RS11175 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS11175 PF00072 Response regulator receiver domain LNN95_RS11215 PF01593 Flavin containing amine oxidoreductase LNN95_RS11230 PF04542 Sigma-70 region 2 LNN95_RS11230 PF08281 Sigma-70, region 4 LNN95_RS11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS11245 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS11245 PF08448 PAS fold LNN95_RS11245 PF13188 PAS domain LNN95_RS11245 PF00072 Response regulator receiver domain LNN95_RS11250 PF00072 Response regulator receiver domain LNN95_RS11255 PF00360 Phytochrome region LNN95_RS11255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS11255 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS11255 PF01590 GAF domain LNN95_RS11255 PF08446 PAS fold LNN95_RS11265 PF03073 TspO/MBR family LNN95_RS11275 PF00293 NUDIX domain LNN95_RS11380 PF00132 Bacterial transferase hexapeptide (six repeats) LNN95_RS11380 PF12804 MobA-like NTP transferase domain LNN95_RS11385 PF13478 XdhC Rossmann domain LNN95_RS11385 PF02625 XdhC and CoxI family LNN95_RS11390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LNN95_RS11390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LNN95_RS11395 PF00941 FAD binding domain in molybdopterin dehydrogenase LNN95_RS11395 PF03450 CO dehydrogenase flavoprotein C-terminal domain LNN95_RS11400 PF01799 [2Fe-2S] binding domain LNN95_RS11400 PF10518 TAT (twin-arginine translocation) pathway signal sequence LNN95_RS11400 PF00111 2Fe-2S iron-sulfur cluster binding domain LNN95_RS11420 PF00561 alpha/beta hydrolase fold LNN95_RS11455 PF17755 UvrA DNA-binding domain LNN95_RS11470 PF01266 FAD dependent oxidoreductase LNN95_RS11490 PF01068 ATP dependent DNA ligase domain LNN95_RS11490 PF13298 DNA polymerase Ligase (LigD) LNN95_RS11490 PF04679 ATP dependent DNA ligase C terminal region LNN95_RS11500 PF05974 Domain of unknown function (DUF892) LNN95_RS11505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LNN95_RS11505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LNN95_RS11525 PF05067 Manganese containing catalase LNN95_RS11530 PF05974 Domain of unknown function (DUF892) LNN95_RS11555 PF00398 Ribosomal RNA adenine dimethylase LNN95_RS11575 PF00107 Zinc-binding dehydrogenase LNN95_RS11575 PF13823 Alcohol dehydrogenase GroES-associated LNN95_RS11575 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS11610 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS11615 PF05524 PEP-utilising enzyme, N-terminal LNN95_RS11615 PF00391 PEP-utilising enzyme, mobile domain LNN95_RS11615 PF02896 PEP-utilising enzyme, TIM barrel domain LNN95_RS11615 PF00381 PTS HPr component phosphorylation site LNN95_RS11615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LNN95_RS11620 PF00294 pfkB family carbohydrate kinase LNN95_RS11625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LNN95_RS11640 PF04616 Glycosyl hydrolases family 43 LNN95_RS11650 PF07691 PA14 domain LNN95_RS11650 PF01915 Glycosyl hydrolase family 3 C-terminal domain LNN95_RS11650 PF14310 Fibronectin type III-like domain LNN95_RS11650 PF00933 Glycosyl hydrolase family 3 N terminal domain LNN95_RS11655 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LNN95_RS11655 PF04616 Glycosyl hydrolases family 43 LNN95_RS11665 PF07477 Glycosyl hydrolase family 67 C-terminus LNN95_RS11665 PF07488 Glycosyl hydrolase family 67 middle domain LNN95_RS11665 PF03648 Glycosyl hydrolase family 67 N-terminus LNN95_RS11670 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS11675 PF00933 Glycosyl hydrolase family 3 N terminal domain LNN95_RS11675 PF01915 Glycosyl hydrolase family 3 C-terminal domain LNN95_RS11675 PF14310 Fibronectin type III-like domain LNN95_RS11680 PF00083 Sugar (and other) transporter LNN95_RS11690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LNN95_RS11690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LNN95_RS11695 PF04820 Tryptophan halogenase LNN95_RS11715 PF02469 Fasciclin domain LNN95_RS11725 PF00144 Beta-lactamase LNN95_RS11730 PF03600 Citrate transporter LNN95_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS11745 PF00005 ABC transporter LNN95_RS11755 PF04303 PrpF protein LNN95_RS11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS11760 PF03466 LysR substrate binding domain LNN95_RS11770 PF02219 Methylenetetrahydrofolate reductase LNN95_RS11775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS11775 PF03466 LysR substrate binding domain LNN95_RS11780 PF03358 NADPH-dependent FMN reductase LNN95_RS11790 PF01717 Cobalamin-independent synthase, Catalytic domain LNN95_RS11805 PF10503 Esterase PHB depolymerase LNN95_RS11810 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS11810 PF00593 TonB dependent receptor LNN95_RS11815 PF00561 alpha/beta hydrolase fold LNN95_RS11820 PF01575 MaoC like domain LNN95_RS11825 PF00672 HAMP domain LNN95_RS11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS11825 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS11830 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS11830 PF00072 Response regulator receiver domain LNN95_RS11835 PF00501 AMP-binding enzyme LNN95_RS11835 PF13193 AMP-binding enzyme C-terminal domain LNN95_RS11840 PF03358 NADPH-dependent FMN reductase LNN95_RS11845 PF00005 ABC transporter LNN95_RS11845 PF00664 ABC transporter transmembrane region LNN95_RS11850 PF00593 TonB dependent receptor LNN95_RS11850 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS11865 PF00005 ABC transporter LNN95_RS11890 PF07729 FCD domain LNN95_RS11890 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS11900 PF14592 Chondroitinase B LNN95_RS11905 PF05426 Alginate lyase LNN95_RS11905 PF07940 Heparinase II/III-like protein LNN95_RS11910 PF07690 Major Facilitator Superfamily LNN95_RS11925 PF00294 pfkB family carbohydrate kinase LNN95_RS11955 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS11975 PF03466 LysR substrate binding domain LNN95_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS12000 PF00158 Sigma-54 interaction domain LNN95_RS12000 PF00072 Response regulator receiver domain LNN95_RS12000 PF02954 Bacterial regulatory protein, Fis family LNN95_RS12055 PF13350 Tyrosine phosphatase family LNN95_RS12060 PF00593 TonB dependent receptor LNN95_RS12060 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS12080 PF02245 Methylpurine-DNA glycosylase (MPG) LNN95_RS12090 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS12090 PF00563 EAL domain LNN95_RS12090 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS12095 PF03372 Endonuclease/Exonuclease/phosphatase family LNN95_RS12100 PF00128 Alpha amylase, catalytic domain LNN95_RS12100 PF16657 Maltogenic Amylase, C-terminal domain LNN95_RS12105 PF00296 Luciferase-like monooxygenase LNN95_RS12125 PF12704 MacB-like periplasmic core domain LNN95_RS12125 PF02687 FtsX-like permease family LNN95_RS12125 PF00005 ABC transporter LNN95_RS12130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS12140 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS12140 PF00072 Response regulator receiver domain LNN95_RS12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS12145 PF00672 HAMP domain LNN95_RS12145 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS12165 PF00593 TonB dependent receptor LNN95_RS12165 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS12185 PF06224 Winged helix DNA-binding domain LNN95_RS12195 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS12195 PF00593 TonB dependent receptor LNN95_RS12205 PF00561 alpha/beta hydrolase fold LNN95_RS12220 PF00689 Cation transporting ATPase, C-terminus LNN95_RS12220 PF00690 Cation transporter/ATPase, N-terminus LNN95_RS12225 PF02308 MgtC family LNN95_RS12230 PF13493 Domain of unknown function (DUF4118) LNN95_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS12230 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS12230 PF08447 PAS fold LNN95_RS12230 PF13426 PAS domain LNN95_RS12230 PF00989 PAS fold LNN95_RS12235 PF00072 Response regulator receiver domain LNN95_RS12235 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS12245 PF06772 Bacterial low temperature requirement A protein (LtrA) LNN95_RS12270 PF00753 Metallo-beta-lactamase superfamily LNN95_RS12280 PF00384 Molybdopterin oxidoreductase LNN95_RS12285 PF02634 FdhD/NarQ family LNN95_RS12305 PF07690 Major Facilitator Superfamily LNN95_RS12330 PF00005 ABC transporter LNN95_RS12345 PF03466 LysR substrate binding domain LNN95_RS12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS12350 PF00248 Aldo/keto reductase family LNN95_RS12375 PF05425 Copper resistance protein D LNN95_RS12380 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS12380 PF00072 Response regulator receiver domain LNN95_RS12385 PF00672 HAMP domain LNN95_RS12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS12385 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS12390 PF03466 LysR substrate binding domain LNN95_RS12405 PF00873 AcrB/AcrD/AcrF family LNN95_RS12410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS12410 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS12420 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS12420 PF00072 Response regulator receiver domain LNN95_RS12425 PF08521 Two-component sensor kinase N-terminal LNN95_RS12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS12425 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS12430 PF17678 Glycosyl hydrolase family 92 N-terminal domain LNN95_RS12430 PF07971 Glycosyl hydrolase family 92 LNN95_RS12435 PF00085 Thioredoxin LNN95_RS12450 PF00083 Sugar (and other) transporter LNN95_RS12450 PF08946 Osmosensory transporter coiled coil LNN95_RS12465 PF07536 HWE histidine kinase LNN95_RS12465 PF13426 PAS domain LNN95_RS12465 PF08447 PAS fold LNN95_RS12490 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS12490 PF07660 Secretin and TonB N terminus short domain LNN95_RS12490 PF00593 TonB dependent receptor LNN95_RS12505 PF03466 LysR substrate binding domain LNN95_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS12510 PF02678 Pirin LNN95_RS12510 PF05726 Pirin C-terminal cupin domain LNN95_RS12515 PF00857 Isochorismatase family LNN95_RS12520 PF00857 Isochorismatase family LNN95_RS12545 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS12550 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS12570 PF12019 Type II transport protein GspH LNN95_RS12570 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS12575 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS12575 PF02501 Type II secretion system (T2SS), protein I LNN95_RS12580 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS12580 PF11612 Type II secretion system (T2SS), protein J LNN95_RS12590 PF12849 PBP superfamily domain LNN95_RS12595 PF12849 PBP superfamily domain LNN95_RS12600 PF00482 Type II secretion system (T2SS), protein F LNN95_RS12605 PF00437 Type II/IV secretion system protein LNN95_RS12610 PF03958 Bacterial type II/III secretion system short domain LNN95_RS12610 PF00263 Bacterial type II and III secretion system protein LNN95_RS12630 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS12630 PF08334 Type II secretion system (T2SS), protein G LNN95_RS12660 PF01037 Lrp/AsnC ligand binding domain LNN95_RS12675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNN95_RS12675 PF00128 Alpha amylase, catalytic domain LNN95_RS12685 PF00128 Alpha amylase, catalytic domain LNN95_RS12690 PF02446 4-alpha-glucanotransferase LNN95_RS12695 PF00128 Alpha amylase, catalytic domain LNN95_RS12695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNN95_RS12695 PF11941 Domain of unknown function (DUF3459) LNN95_RS12700 PF02806 Alpha amylase, C-terminal all-beta domain LNN95_RS12700 PF00128 Alpha amylase, catalytic domain LNN95_RS12700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LNN95_RS12705 PF08323 Starch synthase catalytic domain LNN95_RS12705 PF00534 Glycosyl transferases group 1 LNN95_RS12710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS12710 PF08447 PAS fold LNN95_RS12715 PF00667 FAD binding domain LNN95_RS12715 PF00258 Flavodoxin LNN95_RS12715 PF00175 Oxidoreductase NAD-binding domain LNN95_RS12720 PF08402 TOBE domain LNN95_RS12720 PF00005 ABC transporter LNN95_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS12735 PF00027 Cyclic nucleotide-binding domain LNN95_RS12735 PF13545 Crp-like helix-turn-helix domain LNN95_RS12745 PF12804 MobA-like NTP transferase domain LNN95_RS12750 PF02391 MoaE protein LNN95_RS12760 PF03453 MoeA N-terminal region (domain I and II) LNN95_RS12760 PF03454 MoeA C-terminal region (domain IV) LNN95_RS12760 PF00994 Probable molybdopterin binding domain LNN95_RS12765 PF00994 Probable molybdopterin binding domain LNN95_RS12765 PF01967 MoaC family LNN95_RS12770 PF04055 Radical SAM superfamily LNN95_RS12770 PF06463 Molybdenum Cofactor Synthesis C LNN95_RS12790 PF12833 Helix-turn-helix domain LNN95_RS12790 PF02311 AraC-like ligand binding domain LNN95_RS12805 PF13533 Biotin-lipoyl like LNN95_RS12810 PF02321 Outer membrane efflux protein LNN95_RS12840 PF00072 Response regulator receiver domain LNN95_RS12840 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS12845 PF00672 HAMP domain LNN95_RS12845 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS12850 PF01219 Prokaryotic diacylglycerol kinase LNN95_RS12855 PF00884 Sulfatase LNN95_RS12855 PF08019 Phosphoethanolamine transferase EptA/EptB LNN95_RS12875 PF00691 OmpA family LNN95_RS12895 PF00106 short chain dehydrogenase LNN95_RS12900 PF00550 Phosphopantetheine attachment site LNN95_RS12900 PF00501 AMP-binding enzyme LNN95_RS12900 PF00668 Condensation domain LNN95_RS12900 PF00975 Thioesterase domain LNN95_RS12905 PF00857 Isochorismatase family LNN95_RS12905 PF00550 Phosphopantetheine attachment site LNN95_RS12910 PF00857 Isochorismatase family LNN95_RS12910 PF00550 Phosphopantetheine attachment site LNN95_RS12915 PF13193 AMP-binding enzyme C-terminal domain LNN95_RS12915 PF00501 AMP-binding enzyme LNN95_RS12920 PF00425 chorismate binding enzyme LNN95_RS12925 PF07690 Major Facilitator Superfamily LNN95_RS12930 PF03176 MMPL family LNN95_RS12930 PF12823 Domain of unknown function (DUF3817) LNN95_RS12935 PF00296 Luciferase-like monooxygenase LNN95_RS12950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNN95_RS12950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNN95_RS12955 PF01613 Flavin reductase like domain LNN95_RS12965 PF00487 Fatty acid desaturase LNN95_RS12970 PF00970 Oxidoreductase FAD-binding domain LNN95_RS12970 PF00111 2Fe-2S iron-sulfur cluster binding domain LNN95_RS12970 PF00175 Oxidoreductase NAD-binding domain LNN95_RS12975 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS12980 PF00593 TonB dependent receptor LNN95_RS12980 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS12990 PF01325 Iron dependent repressor, N-terminal DNA binding domain LNN95_RS12990 PF02742 Iron dependent repressor, metal binding and dimerisation domain LNN95_RS12995 PF01566 Natural resistance-associated macrophage protein LNN95_RS13010 PF00268 Ribonucleotide reductase, small chain LNN95_RS13015 PF00317 Ribonucleotide reductase, all-alpha domain LNN95_RS13015 PF02867 Ribonucleotide reductase, barrel domain LNN95_RS13015 PF03477 ATP cone domain LNN95_RS13020 PF00109 Beta-ketoacyl synthase, N-terminal domain LNN95_RS13020 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS13020 PF16197 Ketoacyl-synthetase C-terminal extension LNN95_RS13020 PF02801 Beta-ketoacyl synthase, C-terminal domain LNN95_RS13020 PF08659 KR domain LNN95_RS13020 PF00550 Phosphopantetheine attachment site LNN95_RS13020 PF14765 Polyketide synthase dehydratase LNN95_RS13020 PF00698 Acyl transferase domain LNN95_RS13025 PF00593 TonB dependent receptor LNN95_RS13025 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS13030 PF02028 BCCT, betaine/carnitine/choline family transporter LNN95_RS13055 PF00893 Small Multidrug Resistance protein LNN95_RS13060 PF00893 Small Multidrug Resistance protein LNN95_RS13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS13065 PF03466 LysR substrate binding domain LNN95_RS13075 PF07660 Secretin and TonB N terminus short domain LNN95_RS13075 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS13075 PF00593 TonB dependent receptor LNN95_RS13080 PF00654 Voltage gated chloride channel LNN95_RS13085 PF02308 MgtC family LNN95_RS13095 PF13649 Methyltransferase domain LNN95_RS13105 PF00691 OmpA family LNN95_RS13110 PF05662 Coiled stalk of trimeric autotransporter adhesin LNN95_RS13110 PF05658 Head domain of trimeric autotransporter adhesin LNN95_RS13110 PF03895 YadA-like membrane anchor domain LNN95_RS13110 PF03895 YadA-like membrane anchor domain LNN95_RS13110 PF05662 Coiled stalk of trimeric autotransporter adhesin LNN95_RS13110 PF05658 Head domain of trimeric autotransporter adhesin LNN95_RS13110 PF13018 Extended Signal Peptide of Type V secretion system LNN95_RS13110 PF13018 Extended Signal Peptide of Type V secretion system LNN95_RS13140 PF04972 BON domain LNN95_RS13140 PF00263 Bacterial type II and III secretion system protein LNN95_RS13140 PF13629 Pilus formation protein N terminal region LNN95_RS13150 PF00437 Type II/IV secretion system protein LNN95_RS13190 PF00561 alpha/beta hydrolase fold LNN95_RS13195 PF05977 Transmembrane secretion effector LNN95_RS13205 PF01979 Amidohydrolase family LNN95_RS13215 PF00857 Isochorismatase family LNN95_RS13220 PF12833 Helix-turn-helix domain LNN95_RS13220 PF10114 Sensory domain found in PocR LNN95_RS13230 PF00672 HAMP domain LNN95_RS13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS13230 PF07730 Histidine kinase LNN95_RS13230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LNN95_RS13235 PF00072 Response regulator receiver domain LNN95_RS13235 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS13245 PF07690 Major Facilitator Superfamily LNN95_RS13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS13250 PF03466 LysR substrate binding domain LNN95_RS13255 PF13382 Adenine deaminase C-terminal domain LNN95_RS13255 PF01979 Amidohydrolase family LNN95_RS13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS13265 PF03466 LysR substrate binding domain LNN95_RS13275 PF01979 Amidohydrolase family LNN95_RS13290 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS13290 PF00593 TonB dependent receptor LNN95_RS13300 PF02611 CDP-diacylglycerol pyrophosphatase LNN95_RS13320 PF09330 D-lactate dehydrogenase, membrane binding LNN95_RS13320 PF01565 FAD binding domain LNN95_RS13325 PF01070 FMN-dependent dehydrogenase LNN95_RS13330 PF07729 FCD domain LNN95_RS13330 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS13335 PF02652 L-lactate permease LNN95_RS13340 PF02308 MgtC family LNN95_RS13350 PF12833 Helix-turn-helix domain LNN95_RS13365 PF07690 Major Facilitator Superfamily LNN95_RS13370 PF03466 LysR substrate binding domain LNN95_RS13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS13375 PF00933 Glycosyl hydrolase family 3 N terminal domain LNN95_RS13375 PF01915 Glycosyl hydrolase family 3 C-terminal domain LNN95_RS13375 PF07691 PA14 domain LNN95_RS13375 PF14310 Fibronectin type III-like domain LNN95_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS13395 PF03466 LysR substrate binding domain LNN95_RS13420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LNN95_RS13420 PF14579 Helix-hairpin-helix motif LNN95_RS13420 PF01336 OB-fold nucleic acid binding domain LNN95_RS13420 PF07733 Bacterial DNA polymerase III alpha NTPase domain LNN95_RS13420 PF02811 PHP domain LNN95_RS13430 PF00155 Aminotransferase class I and II LNN95_RS13430 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS13435 PF01168 Alanine racemase, N-terminal domain LNN95_RS13440 PF00958 GMP synthase C terminal domain LNN95_RS13440 PF02540 NAD synthase LNN95_RS13440 PF00117 Glutamine amidotransferase class-I LNN95_RS13455 PF04542 Sigma-70 region 2 LNN95_RS13455 PF08281 Sigma-70, region 4 LNN95_RS13465 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS13465 PF00593 TonB dependent receptor LNN95_RS13490 PF01276 Orn/Lys/Arg decarboxylase, major domain LNN95_RS13490 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LNN95_RS13490 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LNN95_RS13495 PF13520 Amino acid permease LNN95_RS13505 PF13098 Thioredoxin-like domain LNN95_RS13510 PF00578 AhpC/TSA family LNN95_RS13520 PF13411 MerR HTH family regulatory protein LNN95_RS13585 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS13590 PF08447 PAS fold LNN95_RS13590 PF13426 PAS domain LNN95_RS13590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS13610 PF00563 EAL domain LNN95_RS13610 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS13610 PF05231 MASE1 LNN95_RS13610 PF08447 PAS fold LNN95_RS13610 PF08448 PAS fold LNN95_RS13610 PF13426 PAS domain LNN95_RS13615 PF17674 HHH domain LNN95_RS13615 PF00575 S1 RNA binding domain LNN95_RS13615 PF09371 Tex-like protein N-terminal domain LNN95_RS13615 PF16921 Tex protein YqgF-like domain LNN95_RS13635 PF17263 Family of unknown function (DUF5329) LNN95_RS13640 PF00561 alpha/beta hydrolase fold LNN95_RS13660 PF01554 MatE LNN95_RS13680 PF03618 Kinase/pyrophosphorylase LNN95_RS13685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LNN95_RS13685 PF00391 PEP-utilising enzyme, mobile domain LNN95_RS13685 PF02896 PEP-utilising enzyme, TIM barrel domain LNN95_RS13695 PF00924 Mechanosensitive ion channel LNN95_RS13695 PF05552 Conserved TM helix LNN95_RS13700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNN95_RS13715 PF00929 Exonuclease LNN95_RS13720 PF14437 MafB19-like deaminase LNN95_RS13725 PF01638 HxlR-like helix-turn-helix LNN95_RS13730 PF02525 Flavodoxin-like fold LNN95_RS13735 PF13673 Acetyltransferase (GNAT) domain LNN95_RS13820 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LNN95_RS13825 PF05101 Type IV secretory pathway, VirB3-like protein LNN95_RS13830 PF04956 TrbC/VIRB2 family LNN95_RS13835 PF01464 Transglycosylase SLT domain LNN95_RS13840 PF00437 Type II/IV secretion system protein LNN95_RS13845 PF03743 Bacterial conjugation TrbI-like protein LNN95_RS13855 PF04335 VirB8 protein LNN95_RS13865 PF02534 Type IV secretory system Conjugative DNA transfer LNN95_RS13875 PF07690 Major Facilitator Superfamily LNN95_RS13880 PF00376 MerR family regulatory protein LNN95_RS13880 PF09278 MerR, DNA binding LNN95_RS13885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNN95_RS13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS13910 PF13426 PAS domain LNN95_RS13910 PF00072 Response regulator receiver domain LNN95_RS13915 PF01494 FAD binding domain LNN95_RS13920 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS13920 PF17754 MftR C-terminal domain LNN95_RS13925 PF00593 TonB dependent receptor LNN95_RS13925 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS13935 PF00072 Response regulator receiver domain LNN95_RS13935 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS13940 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS13955 PF12704 MacB-like periplasmic core domain LNN95_RS13955 PF02687 FtsX-like permease family LNN95_RS13955 PF00005 ABC transporter LNN95_RS13975 PF01638 HxlR-like helix-turn-helix LNN95_RS13980 PF00107 Zinc-binding dehydrogenase LNN95_RS13980 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS13990 PF13361 UvrD-like helicase C-terminal domain LNN95_RS13990 PF12462 DNA helicase IV / RNA helicase N terminal LNN95_RS13990 PF00580 UvrD/REP helicase N-terminal domain LNN95_RS14005 PF03895 YadA-like membrane anchor domain LNN95_RS14005 PF05658 Head domain of trimeric autotransporter adhesin LNN95_RS14005 PF05662 Coiled stalk of trimeric autotransporter adhesin LNN95_RS14025 PF17841 BID domain of Bartonella effector protein (Bep) LNN95_RS14025 PF01443 Viral (Superfamily 1) RNA helicase LNN95_RS14025 PF03389 MobA/MobL family LNN95_RS14035 PF12796 Ankyrin repeats (3 copies) LNN95_RS14105 PF13614 AAA domain LNN95_RS14230 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS14230 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS14230 PF00563 EAL domain LNN95_RS14250 PF02954 Bacterial regulatory protein, Fis family LNN95_RS14250 PF00072 Response regulator receiver domain LNN95_RS14250 PF00158 Sigma-54 interaction domain LNN95_RS14255 PF00072 Response regulator receiver domain LNN95_RS14255 PF13188 PAS domain LNN95_RS14255 PF08448 PAS fold LNN95_RS14255 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS14260 PF00072 Response regulator receiver domain LNN95_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS14260 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS14260 PF08448 PAS fold LNN95_RS14260 PF13188 PAS domain LNN95_RS14265 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS14265 PF00563 EAL domain LNN95_RS14265 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS14425 PF18818 Metallopeptidase superfamily domain LNN95_RS14425 PF08401 Domain of unknown function (DUF1738) LNN95_RS14425 PF13362 Toprim domain LNN95_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS14475 PF03466 LysR substrate binding domain LNN95_RS14480 PF02525 Flavodoxin-like fold LNN95_RS14490 PF02403 Seryl-tRNA synthetase N-terminal domain LNN95_RS14490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNN95_RS14495 PF03544 Gram-negative bacterial TonB protein C-terminal LNN95_RS14505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LNN95_RS14510 PF01842 ACT domain LNN95_RS14510 PF01817 Chorismate mutase type II LNN95_RS14510 PF00800 Prephenate dehydratase LNN95_RS14515 PF00266 Aminotransferase class-V LNN95_RS14550 PF07969 Amidohydrolase family LNN95_RS14555 PF00221 Aromatic amino acid lyase LNN95_RS14565 PF17391 Urocanase N-terminal domain LNN95_RS14565 PF17392 Urocanase C-terminal domain LNN95_RS14565 PF01175 Urocanase Rossmann-like domain LNN95_RS14570 PF00144 Beta-lactamase LNN95_RS14575 PF02371 Transposase IS116/IS110/IS902 family LNN95_RS14575 PF01548 Transposase LNN95_RS14585 PF00593 TonB dependent receptor LNN95_RS14585 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS14615 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS14625 PF04371 Porphyromonas-type peptidyl-arginine deiminase LNN95_RS14630 PF03466 LysR substrate binding domain LNN95_RS14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS14675 PF00144 Beta-lactamase LNN95_RS14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS14685 PF03466 LysR substrate binding domain LNN95_RS14690 PF00107 Zinc-binding dehydrogenase LNN95_RS14690 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS14695 PF13360 PQQ-like domain LNN95_RS14700 PF03989 DNA gyrase C-terminal domain, beta-propeller LNN95_RS14700 PF00521 DNA gyrase/topoisomerase IV, subunit A LNN95_RS14705 PF01008 Initiation factor 2 subunit family LNN95_RS14715 PF00152 tRNA synthetases class II (D, K and N) LNN95_RS14725 PF00533 BRCA1 C Terminus (BRCT) domain LNN95_RS14725 PF01653 NAD-dependent DNA ligase adenylation domain LNN95_RS14725 PF03120 NAD-dependent DNA ligase OB-fold domain LNN95_RS14725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LNN95_RS14725 PF12826 Helix-hairpin-helix motif LNN95_RS14730 PF00155 Aminotransferase class I and II LNN95_RS14735 PF04354 ZipA, C-terminal FtsZ-binding domain LNN95_RS14740 PF02463 RecF/RecN/SMC N terminal domain LNN95_RS14745 PF03948 Ribosomal protein L9, C-terminal domain LNN95_RS14745 PF01281 Ribosomal protein L9, N-terminal domain LNN95_RS14750 PF01084 Ribosomal protein S18 LNN95_RS14755 PF01250 Ribosomal protein S6 LNN95_RS14760 PF01521 Iron-sulphur cluster biosynthesis LNN95_RS14765 PF01336 OB-fold nucleic acid binding domain LNN95_RS14765 PF00152 tRNA synthetases class II (D, K and N) LNN95_RS14785 PF00484 Carbonic anhydrase LNN95_RS14790 PF06052 3-hydroxyanthranilic acid dioxygenase LNN95_RS14795 PF00266 Aminotransferase class-V LNN95_RS14800 PF01494 FAD binding domain LNN95_RS14805 PF08411 Exonuclease C-terminal LNN95_RS14805 PF00929 Exonuclease LNN95_RS14815 PF00248 Aldo/keto reductase family LNN95_RS14830 PF01513 ATP-NAD kinase LNN95_RS14835 PF05088 Bacterial NAD-glutamate dehydrogenase LNN95_RS14845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS14845 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS14850 PF00873 AcrB/AcrD/AcrF family LNN95_RS14860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS14860 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS14860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNN95_RS14865 PF03551 Transcriptional regulator PadR-like family LNN95_RS14865 PF13847 Methyltransferase domain LNN95_RS14870 PF02574 Homocysteine S-methyltransferase LNN95_RS14870 PF00809 Pterin binding enzyme LNN95_RS14870 PF02965 Vitamin B12 dependent methionine synthase, activation domain LNN95_RS14870 PF02607 B12 binding domain LNN95_RS14870 PF02310 B12 binding domain LNN95_RS14875 PF00809 Pterin binding enzyme LNN95_RS14875 PF02965 Vitamin B12 dependent methionine synthase, activation domain LNN95_RS14875 PF02607 B12 binding domain LNN95_RS14875 PF02310 B12 binding domain LNN95_RS14875 PF02574 Homocysteine S-methyltransferase LNN95_RS14890 PF04102 SlyX LNN95_RS14895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNN95_RS14895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNN95_RS14895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNN95_RS14900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LNN95_RS14900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNN95_RS14905 PF00255 Glutathione peroxidase LNN95_RS14910 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS14915 PF00005 ABC transporter LNN95_RS14940 PF10415 Fumarase C C-terminus LNN95_RS14940 PF00206 Lyase LNN95_RS14945 PF08328 Adenylosuccinate lyase C-terminal LNN95_RS14945 PF00206 Lyase LNN95_RS14950 PF02371 Transposase IS116/IS110/IS902 family LNN95_RS14950 PF01548 Transposase LNN95_RS14960 PF08007 Cupin superfamily protein LNN95_RS14965 PF13673 Acetyltransferase (GNAT) domain LNN95_RS14970 PF16870 2-oxoglutarate dehydrogenase C-terminal LNN95_RS14970 PF00676 Dehydrogenase E1 component LNN95_RS14970 PF16078 2-oxoglutarate dehydrogenase N-terminus LNN95_RS14970 PF02779 Transketolase, pyrimidine binding domain LNN95_RS14975 PF02817 e3 binding domain LNN95_RS14975 PF00364 Biotin-requiring enzyme LNN95_RS14975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNN95_RS14980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS14980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNN95_RS14995 PF09423 PhoD-like phosphatase LNN95_RS14995 PF16655 PhoD-like phosphatase, N-terminal domain LNN95_RS15005 PF00772 DnaB-like helicase N terminal domain LNN95_RS15005 PF03796 DnaB-like helicase C terminal domain LNN95_RS15010 PF03358 NADPH-dependent FMN reductase LNN95_RS15015 PF13537 Glutamine amidotransferase domain LNN95_RS15015 PF00733 Asparagine synthase LNN95_RS15020 PF02779 Transketolase, pyrimidine binding domain LNN95_RS15020 PF02780 Transketolase, C-terminal domain LNN95_RS15020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LNN95_RS15025 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS15045 PF01026 TatD related DNase LNN95_RS15050 PF00899 ThiF family LNN95_RS15055 PF01322 Cytochrome C' LNN95_RS15065 PF00313 'Cold-shock' DNA-binding domain LNN95_RS15075 PF02253 Phospholipase A1 LNN95_RS15080 PF03960 ArsC family LNN95_RS15085 PF00043 Glutathione S-transferase, C-terminal domain LNN95_RS15085 PF13417 Glutathione S-transferase, N-terminal domain LNN95_RS15100 PF05681 Fumarate hydratase (Fumerase) LNN95_RS15100 PF05683 Fumarase C-terminus LNN95_RS15105 PF12680 SnoaL-like domain LNN95_RS15105 PF04542 Sigma-70 region 2 LNN95_RS15105 PF08281 Sigma-70, region 4 LNN95_RS15110 PF02627 Carboxymuconolactone decarboxylase family LNN95_RS15115 PF00005 ABC transporter LNN95_RS15120 PF00175 Oxidoreductase NAD-binding domain LNN95_RS15120 PF00970 Oxidoreductase FAD-binding domain LNN95_RS15125 PF00255 Glutathione peroxidase LNN95_RS15130 PF01432 Peptidase family M3 LNN95_RS15155 PF01694 Rhomboid family LNN95_RS15160 PF00854 POT family LNN95_RS15170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LNN95_RS15170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LNN95_RS15175 PF00545 ribonuclease LNN95_RS15190 PF01106 NifU-like domain LNN95_RS15195 PF01329 Pterin 4 alpha carbinolamine dehydratase LNN95_RS15205 PF02535 ZIP Zinc transporter LNN95_RS15210 PF00849 RNA pseudouridylate synthase LNN95_RS15210 PF01479 S4 domain LNN95_RS15215 PF10150 Ribonuclease E/G family LNN95_RS15215 PF00575 S1 RNA binding domain LNN95_RS15215 PF12111 Polyribonucleotide phosphorylase C terminal LNN95_RS15230 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS15235 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS15240 PF01547 Bacterial extracellular solute-binding protein LNN95_RS15255 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS15260 PF01722 BolA-like protein LNN95_RS15265 PF03795 YCII-related domain LNN95_RS15270 PF02616 Segregation and condensation protein ScpA LNN95_RS15275 PF04079 Segregation and condensation complex subunit ScpB LNN95_RS15280 PF00849 RNA pseudouridylate synthase LNN95_RS15280 PF01479 S4 domain LNN95_RS15290 PF07690 Major Facilitator Superfamily LNN95_RS15310 PF00795 Carbon-nitrogen hydrolase LNN95_RS15315 PF00155 Aminotransferase class I and II LNN95_RS15320 PF00005 ABC transporter LNN95_RS15325 PF03379 CcmB protein LNN95_RS15330 PF01578 Cytochrome C assembly protein LNN95_RS15340 PF03100 CcmE LNN95_RS15345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LNN95_RS15345 PF01578 Cytochrome C assembly protein LNN95_RS15350 PF08534 Redoxin LNN95_RS15355 PF03918 Cytochrome C biogenesis protein LNN95_RS15365 PF00561 alpha/beta hydrolase fold LNN95_RS15375 PF00664 ABC transporter transmembrane region LNN95_RS15375 PF00005 ABC transporter LNN95_RS15380 PF00664 ABC transporter transmembrane region LNN95_RS15380 PF00005 ABC transporter LNN95_RS15385 PF01654 Cytochrome bd terminal oxidase subunit I LNN95_RS15390 PF02322 Cytochrome bd terminal oxidase subunit II LNN95_RS15420 PF14883 Hypothetical glycosyl hydrolase family 13 LNN95_RS15420 PF01522 Polysaccharide deacetylase LNN95_RS15425 PF00535 Glycosyl transferase family 2 LNN95_RS15435 PF00171 Aldehyde dehydrogenase family LNN95_RS15440 PF01472 PUA domain LNN95_RS15440 PF00696 Amino acid kinase family LNN95_RS15450 PF00206 Lyase LNN95_RS15455 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNN95_RS15465 PF00696 Amino acid kinase family LNN95_RS15465 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LNN95_RS15470 PF07687 Peptidase dimerisation domain LNN95_RS15470 PF01546 Peptidase family M20/M25/M40 LNN95_RS15475 PF00764 Arginosuccinate synthase LNN95_RS15480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LNN95_RS15480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LNN95_RS15490 PF09190 DALR domain LNN95_RS15490 PF01406 tRNA synthetases class I (C) catalytic domain LNN95_RS15495 PF02657 Fe-S metabolism associated domain LNN95_RS15505 PF01258 Prokaryotic dksA/traR C4-type zinc finger LNN95_RS15510 PF01809 Putative membrane protein insertion efficiency factor LNN95_RS15515 PF01979 Amidohydrolase family LNN95_RS15520 PF01551 Peptidase family M23 LNN95_RS15520 PF08460 Bacterial SH3 domain LNN95_RS15530 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS15540 PF01979 Amidohydrolase family LNN95_RS15545 PF08207 Elongation factor P (EF-P) KOW-like domain LNN95_RS15545 PF09285 Elongation factor P, C-terminal LNN95_RS15545 PF01132 Elongation factor P (EF-P) OB domain LNN95_RS15550 PF04055 Radical SAM superfamily LNN95_RS15555 PF13188 PAS domain LNN95_RS15555 PF03707 Bacterial signalling protein N terminal repeat LNN95_RS15555 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS15555 PF00563 EAL domain LNN95_RS15565 PF00588 SpoU rRNA Methylase family LNN95_RS15570 PF00459 Inositol monophosphatase family LNN95_RS15575 PF01435 Peptidase family M48 LNN95_RS15580 PF00749 tRNA synthetases class I (E and Q), catalytic domain LNN95_RS15585 PF00106 short chain dehydrogenase LNN95_RS15590 PF07879 PHB/PHA accumulation regulator DNA-binding domain LNN95_RS15590 PF05233 PHB accumulation regulatory domain LNN95_RS15605 PF01119 DNA mismatch repair protein, C-terminal domain LNN95_RS15605 PF08676 MutL C terminal dimerisation domain LNN95_RS15610 PF01520 N-acetylmuramoyl-L-alanine amidase LNN95_RS15615 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LNN95_RS15620 PF01256 Carbohydrate kinase LNN95_RS15620 PF03853 YjeF-related protein N-terminus LNN95_RS15625 PF08331 Domain of unknown function (DUF1730) LNN95_RS15630 PF13742 OB-fold nucleic acid binding domain LNN95_RS15630 PF02601 Exonuclease VII, large subunit LNN95_RS15640 PF03781 Sulfatase-modifying factor enzyme 1 LNN95_RS15645 PF00570 HRDC domain LNN95_RS15645 PF01612 3'-5' exonuclease LNN95_RS15660 PF00593 TonB dependent receptor LNN95_RS15660 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS15665 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS15675 PF00561 alpha/beta hydrolase fold LNN95_RS15680 PF07859 alpha/beta hydrolase fold LNN95_RS15705 PF02805 Metal binding domain of Ada LNN95_RS15705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LNN95_RS15705 PF12833 Helix-turn-helix domain LNN95_RS15705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LNN95_RS15710 PF00107 Zinc-binding dehydrogenase LNN95_RS15710 PF16884 N-terminal domain of oxidoreductase LNN95_RS15740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNN95_RS15740 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS15740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS15740 PF12806 Acetyl-CoA dehydrogenase C-terminal like LNN95_RS15750 PF02780 Transketolase, C-terminal domain LNN95_RS15750 PF02779 Transketolase, pyrimidine binding domain LNN95_RS15750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LNN95_RS15780 PF17932 Tetracyclin repressor-like, C-terminal domain LNN95_RS15780 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS15785 PF00893 Small Multidrug Resistance protein LNN95_RS15790 PF07043 Protein of unknown function (DUF1328) LNN95_RS15795 PF01810 LysE type translocator LNN95_RS15800 PF00574 Clp protease LNN95_RS15810 PF01022 Bacterial regulatory protein, arsR family LNN95_RS15815 PF01177 Asp/Glu/Hydantoin racemase LNN95_RS15835 PF00583 Acetyltransferase (GNAT) family LNN95_RS15850 PF00216 Bacterial DNA-binding protein LNN95_RS15855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LNN95_RS15855 PF03483 B3/4 domain LNN95_RS15855 PF03484 tRNA synthetase B5 domain LNN95_RS15855 PF03147 Ferredoxin-fold anticodon binding domain LNN95_RS15855 PF01588 Putative tRNA binding domain LNN95_RS15860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LNN95_RS15860 PF01409 tRNA synthetases class II core domain (F) LNN95_RS15865 PF00453 Ribosomal protein L20 LNN95_RS15870 PF01632 Ribosomal protein L35 LNN95_RS15875 PF00707 Translation initiation factor IF-3, C-terminal domain LNN95_RS15875 PF05198 Translation initiation factor IF-3, N-terminal domain LNN95_RS15880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LNN95_RS15880 PF03129 Anticodon binding domain LNN95_RS15880 PF02824 TGS domain LNN95_RS15880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LNN95_RS15900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNN95_RS15905 PF00041 Fibronectin type III domain LNN95_RS15905 PF00704 Glycosyl hydrolases family 18 LNN95_RS15910 PF00013 KH domain LNN95_RS15910 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LNN95_RS15910 PF01138 3' exoribonuclease family, domain 1 LNN95_RS15910 PF00575 S1 RNA binding domain LNN95_RS15910 PF03725 3' exoribonuclease family, domain 2 LNN95_RS15915 PF00312 Ribosomal protein S15 LNN95_RS15920 PF16198 tRNA pseudouridylate synthase B C-terminal domain LNN95_RS15920 PF01509 TruB family pseudouridylate synthase (N terminal domain) LNN95_RS15920 PF09157 Pseudouridine synthase II TruB, C-terminal LNN95_RS15925 PF02033 Ribosome-binding factor A LNN95_RS15930 PF08364 Bacterial translation initiation factor IF-2 associated region LNN95_RS15930 PF00009 Elongation factor Tu GTP binding domain LNN95_RS15930 PF11987 Translation-initiation factor 2 LNN95_RS15930 PF04760 Translation initiation factor IF-2, N-terminal region LNN95_RS15935 PF00575 S1 RNA binding domain LNN95_RS15935 PF08529 NusA N-terminal domain LNN95_RS15935 PF13184 NusA-like KH domain LNN95_RS15940 PF17384 RimP C-terminal SH3 domain LNN95_RS15940 PF02576 RimP N-terminal domain LNN95_RS15955 PF00361 Proton-conducting membrane transporter LNN95_RS15960 PF00361 Proton-conducting membrane transporter LNN95_RS15960 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LNN95_RS15965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LNN95_RS15965 PF00361 Proton-conducting membrane transporter LNN95_RS15970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LNN95_RS15975 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LNN95_RS15980 PF12838 4Fe-4S dicluster domain LNN95_RS15985 PF00146 NADH dehydrogenase LNN95_RS15990 PF00384 Molybdopterin oxidoreductase LNN95_RS15990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LNN95_RS15990 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LNN95_RS15995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LNN95_RS15995 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LNN95_RS15995 PF10531 SLBB domain LNN95_RS16005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LNN95_RS16010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LNN95_RS16015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LNN95_RS16020 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LNN95_RS16035 PF00121 Triosephosphate isomerase LNN95_RS16045 PF00884 Sulfatase LNN95_RS16050 PF13439 Glycosyltransferase Family 4 LNN95_RS16050 PF00534 Glycosyl transferases group 1 LNN95_RS16055 PF01522 Polysaccharide deacetylase LNN95_RS16060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LNN95_RS16060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LNN95_RS16060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LNN95_RS16060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LNN95_RS16065 PF01039 Carboxyl transferase domain LNN95_RS16065 PF17848 Acetyl-coA carboxylase zinc finger domain LNN95_RS16070 PF00290 Tryptophan synthase alpha chain LNN95_RS16080 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS16085 PF03466 LysR substrate binding domain LNN95_RS16090 PF01520 N-acetylmuramoyl-L-alanine amidase LNN95_RS16090 PF01471 Putative peptidoglycan binding domain LNN95_RS16100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LNN95_RS16105 PF01416 tRNA pseudouridine synthase LNN95_RS16120 PF02774 Semialdehyde dehydrogenase, dimerisation domain LNN95_RS16120 PF01118 Semialdehyde dehydrogenase, NAD binding domain LNN95_RS16125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LNN95_RS16125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LNN95_RS16130 PF01264 Chorismate synthase LNN95_RS16135 PF05175 Methyltransferase small domain LNN95_RS16140 PF02630 SCO1/SenC LNN95_RS16145 PF02666 Phosphatidylserine decarboxylase LNN95_RS16160 PF05872 Bacterial protein of unknown function (DUF853) LNN95_RS16165 PF03449 Transcription elongation factor, N-terminal LNN95_RS16165 PF01272 Transcription elongation factor, GreA/GreB, C-term LNN95_RS16180 PF04055 Radical SAM superfamily LNN95_RS16180 PF18693 TRAM domain LNN95_RS16180 PF00919 Uncharacterized protein family UPF0004 LNN95_RS16185 PF01738 Dienelactone hydrolase family LNN95_RS16200 PF00692 dUTPase LNN95_RS16205 PF10609 NUBPL iron-transfer P-loop NTPase LNN95_RS16210 PF00593 TonB dependent receptor LNN95_RS16210 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS16215 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS16215 PF00593 TonB dependent receptor LNN95_RS16220 PF05649 Peptidase family M13 LNN95_RS16220 PF01431 Peptidase family M13 LNN95_RS16260 PF00892 EamA-like transporter family LNN95_RS16265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS16265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNN95_RS16270 PF01266 FAD dependent oxidoreductase LNN95_RS16275 PF04235 Protein of unknown function (DUF418) LNN95_RS16280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LNN95_RS16285 PF00877 NlpC/P60 family LNN95_RS16290 PF00877 NlpC/P60 family LNN95_RS16295 PF00375 Sodium:dicarboxylate symporter family LNN95_RS16310 PF01171 PP-loop family LNN95_RS16310 PF09179 TilS substrate binding domain LNN95_RS16310 PF11734 TilS substrate C-terminal domain LNN95_RS16315 PF02609 Exonuclease VII small subunit LNN95_RS16320 PF00348 Polyprenyl synthetase LNN95_RS16330 PF01523 Putative modulator of DNA gyrase LNN95_RS16335 PF04751 Protein of unknown function (DUF615) LNN95_RS16340 PF01523 Putative modulator of DNA gyrase LNN95_RS16350 PF10150 Ribonuclease E/G family LNN95_RS16350 PF00575 S1 RNA binding domain LNN95_RS16355 PF02545 Maf-like protein LNN95_RS16360 PF04402 Protein of unknown function (DUF541) LNN95_RS16370 PF00593 TonB dependent receptor LNN95_RS16370 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS16375 PF13520 Amino acid permease LNN95_RS16390 PF02590 Predicted SPOUT methyltransferase LNN95_RS16400 PF01467 Cytidylyltransferase-like LNN95_RS16415 PF00133 tRNA synthetases class I (I, L, M and V) LNN95_RS16415 PF13603 Leucyl-tRNA synthetase, Domain 2 LNN95_RS16415 PF08264 Anticodon-binding domain of tRNA LNN95_RS16425 PF00085 Thioredoxin LNN95_RS16435 PF01590 GAF domain LNN95_RS16435 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS16435 PF00360 Phytochrome region LNN95_RS16435 PF00563 EAL domain LNN95_RS16460 PF02592 Putative vitamin uptake transporter LNN95_RS16470 PF00144 Beta-lactamase LNN95_RS16475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNN95_RS16485 PF09334 tRNA synthetases class I (M) LNN95_RS16485 PF01588 Putative tRNA binding domain LNN95_RS16495 PF04060 Putative Fe-S cluster LNN95_RS16500 PF01042 Endoribonuclease L-PSP LNN95_RS16505 PF09924 Uncharacterised conserved protein (DUF2156) LNN95_RS16505 PF03706 Lysylphosphatidylglycerol synthase TM region LNN95_RS16535 PF08274 PhnA Zinc-Ribbon LNN95_RS16535 PF03831 PhnA domain LNN95_RS16540 PF00012 Hsp70 protein LNN95_RS16565 PF08281 Sigma-70, region 4 LNN95_RS16565 PF04542 Sigma-70 region 2 LNN95_RS16580 PF01258 Prokaryotic dksA/traR C4-type zinc finger LNN95_RS16585 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LNN95_RS16590 PF01863 Protein of unknown function DUF45 LNN95_RS16600 PF13091 PLD-like domain LNN95_RS16610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LNN95_RS16610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LNN95_RS16615 PF00082 Subtilase family LNN95_RS16615 PF03797 Autotransporter beta-domain LNN95_RS16620 PF02803 Thiolase, C-terminal domain LNN95_RS16620 PF00108 Thiolase, N-terminal domain LNN95_RS16635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS16635 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS16635 PF18158 Adaptive response protein AidB N-terminal domain LNN95_RS16645 PF04679 ATP dependent DNA ligase C terminal region LNN95_RS16645 PF01068 ATP dependent DNA ligase domain LNN95_RS16645 PF04675 DNA ligase N terminus LNN95_RS16650 PF08494 DEAD/H associated LNN95_RS16650 PF00270 DEAD/DEAH box helicase LNN95_RS16650 PF00271 Helicase conserved C-terminal domain LNN95_RS16665 PF01494 FAD binding domain LNN95_RS16670 PF00313 'Cold-shock' DNA-binding domain LNN95_RS16675 PF01048 Phosphorylase superfamily LNN95_RS16680 PF00156 Phosphoribosyl transferase domain LNN95_RS16685 PF00933 Glycosyl hydrolase family 3 N terminal domain LNN95_RS16690 PF01323 DSBA-like thioredoxin domain LNN95_RS16695 PF01928 CYTH domain LNN95_RS16700 PF05958 tRNA (Uracil-5-)-methyltransferase LNN95_RS16705 PF00072 Response regulator receiver domain LNN95_RS16705 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS16710 PF02565 Recombination protein O C terminal LNN95_RS16710 PF11967 Recombination protein O N terminal LNN95_RS16715 PF07650 KH domain LNN95_RS16715 PF01926 50S ribosome-binding GTPase LNN95_RS16720 PF00035 Double-stranded RNA binding motif LNN95_RS16720 PF14622 Ribonuclease-III-like LNN95_RS16730 PF10502 Signal peptidase, peptidase S26 LNN95_RS16735 PF00679 Elongation factor G C-terminus LNN95_RS16735 PF00009 Elongation factor Tu GTP binding domain LNN95_RS16735 PF03144 Elongation factor Tu domain 2 LNN95_RS16735 PF06421 GTP-binding protein LepA C-terminus LNN95_RS16740 PF13180 PDZ domain LNN95_RS16750 PF04542 Sigma-70 region 2 LNN95_RS16750 PF08281 Sigma-70, region 4 LNN95_RS16755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LNN95_RS16755 PF00378 Enoyl-CoA hydratase/isomerase LNN95_RS16755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LNN95_RS16760 PF02678 Pirin LNN95_RS16760 PF05726 Pirin C-terminal cupin domain LNN95_RS16765 PF00230 Major intrinsic protein LNN95_RS16775 PF02678 Pirin LNN95_RS16775 PF05726 Pirin C-terminal cupin domain LNN95_RS16780 PF02554 Carbon starvation protein CstA LNN95_RS16780 PF13722 5TM C-terminal transporter carbon starvation CstA LNN95_RS16785 PF04328 Selenoprotein, putative LNN95_RS16800 PF00672 HAMP domain LNN95_RS16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS16800 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS16805 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS16805 PF00072 Response regulator receiver domain LNN95_RS16820 PF08019 Phosphoethanolamine transferase EptA/EptB LNN95_RS16820 PF00884 Sulfatase LNN95_RS16845 PF07690 Major Facilitator Superfamily LNN95_RS16850 PF02347 Glycine cleavage system P-protein LNN95_RS16860 PF00324 Amino acid permease LNN95_RS16865 PF12833 Helix-turn-helix domain LNN95_RS16865 PF02311 AraC-like ligand binding domain LNN95_RS16870 PF18011 C-terminal domain found in long catalases LNN95_RS16870 PF00199 Catalase LNN95_RS16870 PF06628 Catalase-related immune-responsive LNN95_RS16880 PF02203 Tar ligand binding domain homologue LNN95_RS16880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS16880 PF00672 HAMP domain LNN95_RS16885 PF03734 L,D-transpeptidase catalytic domain LNN95_RS16885 PF01476 LysM domain LNN95_RS16890 PF04225 Opacity-associated protein A LysM-like domain LNN95_RS16890 PF01551 Peptidase family M23 LNN95_RS16900 PF00709 Adenylosuccinate synthetase LNN95_RS16910 PF01145 SPFH domain / Band 7 family LNN95_RS16915 PF12221 Bacterial membrane protein N terminal LNN95_RS16915 PF01145 SPFH domain / Band 7 family LNN95_RS16920 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS16920 PF00107 Zinc-binding dehydrogenase LNN95_RS16925 PF00072 Response regulator receiver domain LNN95_RS16930 PF01556 DnaJ C terminal domain LNN95_RS16930 PF00226 DnaJ domain LNN95_RS16935 PF08534 Redoxin LNN95_RS16945 PF00905 Penicillin binding protein transpeptidase domain LNN95_RS16945 PF06832 Penicillin-Binding Protein C-terminus Family LNN95_RS16945 PF00912 Transglycosylase LNN95_RS16950 PF00207 Alpha-2-macroglobulin family LNN95_RS16950 PF07703 Alpha-2-macroglobulin bait region domain LNN95_RS16950 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LNN95_RS16950 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LNN95_RS16950 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LNN95_RS16950 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LNN95_RS16950 PF17962 Bacterial macroglobulin domain 6 LNN95_RS16950 PF01835 MG2 domain LNN95_RS16955 PF03972 MmgE/PrpD family LNN95_RS16960 PF04303 PrpF protein LNN95_RS16970 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LNN95_RS16975 PF00330 Aconitase family (aconitate hydratase) LNN95_RS16975 PF00694 Aconitase C-terminal domain LNN95_RS16980 PF00285 Citrate synthase, C-terminal domain LNN95_RS16990 PF02954 Bacterial regulatory protein, Fis family LNN95_RS16990 PF06506 Propionate catabolism activator LNN95_RS16990 PF00158 Sigma-54 interaction domain LNN95_RS17010 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LNN95_RS17010 PF01243 Pyridoxamine 5'-phosphate oxidase LNN95_RS17025 PF01202 Shikimate kinase LNN95_RS17030 PF01761 3-dehydroquinate synthase LNN95_RS17040 PF01208 Uroporphyrinogen decarboxylase (URO-D) LNN95_RS17045 PF07690 Major Facilitator Superfamily LNN95_RS17055 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS17055 PF00072 Response regulator receiver domain LNN95_RS17055 PF00989 PAS fold LNN95_RS17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS17055 PF01627 Hpt domain LNN95_RS17055 PF18415 Histidine kinase receptor ArcB trans-membrane domain LNN95_RS17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS17060 PF09308 LuxQ, periplasmic LNN95_RS17060 PF00072 Response regulator receiver domain LNN95_RS17060 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS17070 PF01292 Prokaryotic cytochrome b561 LNN95_RS17085 PF03313 Serine dehydratase alpha chain LNN95_RS17085 PF03315 Serine dehydratase beta chain LNN95_RS17090 PF12697 Alpha/beta hydrolase family LNN95_RS17095 PF00696 Amino acid kinase family LNN95_RS17095 PF03447 Homoserine dehydrogenase, NAD binding domain LNN95_RS17095 PF00742 Homoserine dehydrogenase LNN95_RS17100 PF01053 Cys/Met metabolism PLP-dependent enzyme LNN95_RS17105 PF00561 alpha/beta hydrolase fold LNN95_RS17110 PF01476 LysM domain LNN95_RS17110 PF01551 Peptidase family M23 LNN95_RS17110 PF08525 Opacity-associated protein A N-terminal motif LNN95_RS17115 PF00009 Elongation factor Tu GTP binding domain LNN95_RS17115 PF16658 Class II release factor RF3, C-terminal domain LNN95_RS17120 PF03006 Haemolysin-III related LNN95_RS17125 PF05170 AsmA family LNN95_RS17140 PF00535 Glycosyl transferase family 2 LNN95_RS17145 PF00912 Transglycosylase LNN95_RS17150 PF01430 Hsp33 protein LNN95_RS17160 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS17160 PF00593 TonB dependent receptor LNN95_RS17165 PF01209 ubiE/COQ5 methyltransferase family LNN95_RS17195 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS17205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LNN95_RS17205 PF09317 Domain of unknown function (DUF1974) LNN95_RS17205 PF02770 Acyl-CoA dehydrogenase, middle domain LNN95_RS17205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LNN95_RS17240 PF03466 LysR substrate binding domain LNN95_RS17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS17255 PF01597 Glycine cleavage H-protein LNN95_RS17260 PF01571 Aminomethyltransferase folate-binding domain LNN95_RS17260 PF08669 Glycine cleavage T-protein C-terminal barrel domain LNN95_RS17270 PF01145 SPFH domain / Band 7 family LNN95_RS17270 PF16200 C-terminal region of band_7 LNN95_RS17280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LNN95_RS17285 PF03819 MazG nucleotide pyrophosphohydrolase domain LNN95_RS17290 PF00459 Inositol monophosphatase family LNN95_RS17295 PF00293 NUDIX domain LNN95_RS17300 PF00202 Aminotransferase class-III LNN95_RS17305 PF04452 RNA methyltransferase LNN95_RS17320 PF00072 Response regulator receiver domain LNN95_RS17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS17320 PF02895 Signal transducing histidine kinase, homodimeric domain LNN95_RS17320 PF01627 Hpt domain LNN95_RS17320 PF01584 CheW-like domain LNN95_RS17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS17325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LNN95_RS17330 PF01584 CheW-like domain LNN95_RS17335 PF00072 Response regulator receiver domain LNN95_RS17340 PF00072 Response regulator receiver domain LNN95_RS17345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LNN95_RS17345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LNN95_RS17355 PF00814 Glycoprotease family LNN95_RS17360 PF04851 Type III restriction enzyme, res subunit LNN95_RS17360 PF13307 Helicase C-terminal domain LNN95_RS17370 PF00912 Transglycosylase LNN95_RS17370 PF00905 Penicillin binding protein transpeptidase domain LNN95_RS17370 PF14814 Bifunctional transglycosylase second domain LNN95_RS17375 PF00535 Glycosyl transferase family 2 LNN95_RS17385 PF04607 Region found in RelA / SpoT proteins LNN95_RS17385 PF02824 TGS domain LNN95_RS17385 PF13291 ACT domain LNN95_RS17395 PF11898 Domain of unknown function (DUF3418) LNN95_RS17395 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LNN95_RS17395 PF00270 DEAD/DEAH box helicase LNN95_RS17395 PF04408 Helicase associated domain (HA2) LNN95_RS17395 PF00271 Helicase conserved C-terminal domain LNN95_RS17400 PF00210 Ferritin-like domain LNN95_RS17405 PF00270 DEAD/DEAH box helicase LNN95_RS17405 PF00271 Helicase conserved C-terminal domain LNN95_RS17405 PF00570 HRDC domain LNN95_RS17405 PF16124 RecQ zinc-binding LNN95_RS17405 PF09382 RQC domain LNN95_RS17415 PF00394 Multicopper oxidase LNN95_RS17415 PF07732 Multicopper oxidase LNN95_RS17415 PF07731 Multicopper oxidase LNN95_RS17420 PF05275 Copper resistance protein B precursor (CopB) LNN95_RS17480 PF06508 Queuosine biosynthesis protein QueC LNN95_RS17485 PF04055 Radical SAM superfamily LNN95_RS17495 PF00691 OmpA family LNN95_RS17500 PF07676 WD40-like Beta Propeller Repeat LNN95_RS17500 PF04052 TolB amino-terminal domain LNN95_RS17510 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS17515 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS17520 PF03061 Thioesterase superfamily LNN95_RS17525 PF05496 Holliday junction DNA helicase RuvB P-loop domain LNN95_RS17525 PF17864 RuvB AAA lid domain LNN95_RS17525 PF05491 RuvB C-terminal winged helix domain LNN95_RS17530 PF02705 K+ potassium transporter LNN95_RS17535 PF07499 RuvA, C-terminal domain LNN95_RS17535 PF01330 RuvA N terminal domain LNN95_RS17540 PF02075 Crossover junction endodeoxyribonuclease RuvC LNN95_RS17545 PF01709 Transcriptional regulator LNN95_RS17565 PF02938 GAD domain LNN95_RS17565 PF01336 OB-fold nucleic acid binding domain LNN95_RS17565 PF00152 tRNA synthetases class II (D, K and N) LNN95_RS17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS17590 PF03466 LysR substrate binding domain LNN95_RS17595 PF00005 ABC transporter LNN95_RS17595 PF12848 ABC transporter LNN95_RS17605 PF00999 Sodium/hydrogen exchanger family LNN95_RS17605 PF02254 TrkA-N domain LNN95_RS17610 PF01053 Cys/Met metabolism PLP-dependent enzyme LNN95_RS17615 PF00072 Response regulator receiver domain LNN95_RS17615 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS17620 PF00672 HAMP domain LNN95_RS17620 PF16527 Two-component sensor protein CpxA, periplasmic domain LNN95_RS17620 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS17630 PF10431 C-terminal, D2-small domain, of ClpB protein LNN95_RS17630 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS17630 PF07724 AAA domain (Cdc48 subfamily) LNN95_RS17630 PF17871 AAA lid domain LNN95_RS17630 PF02861 Clp amino terminal domain, pathogenicity island component LNN95_RS17655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNN95_RS17655 PF00205 Thiamine pyrophosphate enzyme, central domain LNN95_RS17655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNN95_RS17670 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS17670 PF00593 TonB dependent receptor LNN95_RS17675 PF02358 Trehalose-phosphatase LNN95_RS17680 PF00723 Glycosyl hydrolases family 15 LNN95_RS17685 PF00982 Glycosyltransferase family 20 LNN95_RS17690 PF04134 Protein of unknown function, DUF393 LNN95_RS17700 PF02578 Multi-copper polyphenol oxidoreductase laccase LNN95_RS17705 PF00849 RNA pseudouridylate synthase LNN95_RS17710 PF13525 Outer membrane lipoprotein LNN95_RS17720 PF02540 NAD synthase LNN95_RS17720 PF00795 Carbon-nitrogen hydrolase LNN95_RS17725 PF00549 CoA-ligase LNN95_RS17725 PF02629 CoA binding domain LNN95_RS17730 PF08442 ATP-grasp domain LNN95_RS17730 PF00549 CoA-ligase LNN95_RS17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS17735 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS17740 PF00072 Response regulator receiver domain LNN95_RS17740 PF00158 Sigma-54 interaction domain LNN95_RS17740 PF02954 Bacterial regulatory protein, Fis family LNN95_RS17745 PF00437 Type II/IV secretion system protein LNN95_RS17745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LNN95_RS17750 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS17750 PF00114 Pilin (bacterial filament) LNN95_RS17765 PF00482 Type II secretion system (T2SS), protein F LNN95_RS17770 PF06750 Bacterial Peptidase A24 N-terminal domain LNN95_RS17770 PF01478 Type IV leader peptidase family LNN95_RS17775 PF01121 Dephospho-CoA kinase LNN95_RS17785 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS17785 PF00672 HAMP domain LNN95_RS17790 PF00072 Response regulator receiver domain LNN95_RS17790 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS17800 PF08443 RimK-like ATP-grasp domain LNN95_RS17800 PF18030 RimK PreATP-grasp domain LNN95_RS17820 PF05656 Protein of unknown function (DUF805) LNN95_RS17835 PF03797 Autotransporter beta-domain LNN95_RS17835 PF00657 GDSL-like Lipase/Acylhydrolase LNN95_RS17845 PF05690 Thiazole biosynthesis protein ThiG LNN95_RS17850 PF02390 Putative methyltransferase LNN95_RS17855 PF02080 TrkA-C domain LNN95_RS17855 PF03600 Citrate transporter LNN95_RS17870 PF01557 Fumarylacetoacetate (FAA) hydrolase family LNN95_RS17875 PF01741 Large-conductance mechanosensitive channel, MscL LNN95_RS17885 PF00588 SpoU rRNA Methylase family LNN95_RS17885 PF08032 RNA 2'-O ribose methyltransferase substrate binding LNN95_RS17890 PF01235 Sodium:alanine symporter family LNN95_RS17895 PF13302 Acetyltransferase (GNAT) domain LNN95_RS17900 PF00873 AcrB/AcrD/AcrF family LNN95_RS17905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS17905 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS17920 PF03466 LysR substrate binding domain LNN95_RS17925 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS17930 PF01661 Macro domain LNN95_RS17940 PF00274 Fructose-bisphosphate aldolase class-I LNN95_RS17945 PF00224 Pyruvate kinase, barrel domain LNN95_RS17945 PF02887 Pyruvate kinase, alpha/beta domain LNN95_RS17950 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS17955 PF00162 Phosphoglycerate kinase LNN95_RS17970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LNN95_RS17970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LNN95_RS17975 PF03922 OmpW family LNN95_RS17985 PF00753 Metallo-beta-lactamase superfamily LNN95_RS18000 PF03965 Penicillinase repressor LNN95_RS18015 PF01381 Helix-turn-helix LNN95_RS18020 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LNN95_RS18025 PF02780 Transketolase, C-terminal domain LNN95_RS18025 PF00456 Transketolase, thiamine diphosphate binding domain LNN95_RS18025 PF02779 Transketolase, pyrimidine binding domain LNN95_RS18030 PF00375 Sodium:dicarboxylate symporter family LNN95_RS18040 PF07584 Aerotolerance regulator N-terminal LNN95_RS18040 PF00092 von Willebrand factor type A domain LNN95_RS18060 PF17863 AAA lid domain LNN95_RS18060 PF07726 ATPase family associated with various cellular activities (AAA) LNN95_RS18065 PF11741 AMIN domain LNN95_RS18065 PF00263 Bacterial type II and III secretion system protein LNN95_RS18065 PF03958 Bacterial type II/III secretion system short domain LNN95_RS18065 PF07660 Secretin and TonB N terminus short domain LNN95_RS18070 PF04351 Pilus assembly protein, PilP LNN95_RS18075 PF04350 Pilus assembly protein, PilO LNN95_RS18085 PF11104 Type IV pilus assembly protein PilM; LNN95_RS18090 PF17092 Penicillin-binding protein OB-like domain LNN95_RS18090 PF00912 Transglycosylase LNN95_RS18090 PF00905 Penicillin binding protein transpeptidase domain LNN95_RS18105 PF05658 Head domain of trimeric autotransporter adhesin LNN95_RS18105 PF05662 Coiled stalk of trimeric autotransporter adhesin LNN95_RS18105 PF13018 Extended Signal Peptide of Type V secretion system LNN95_RS18105 PF03895 YadA-like membrane anchor domain LNN95_RS18120 PF15976 CS1-pili formation C-terminal LNN95_RS18120 PF17271 TcfC Usher-like barrel domain LNN95_RS18120 PF16967 E-set like domain LNN95_RS18150 PF00285 Citrate synthase, C-terminal domain LNN95_RS18155 PF01197 Ribosomal protein L31 LNN95_RS18160 PF01156 Inosine-uridine preferring nucleoside hydrolase LNN95_RS18165 PF00271 Helicase conserved C-terminal domain LNN95_RS18165 PF17191 RecG wedge domain LNN95_RS18165 PF00270 DEAD/DEAH box helicase LNN95_RS18170 PF01042 Endoribonuclease L-PSP LNN95_RS18175 PF13291 ACT domain LNN95_RS18175 PF04607 Region found in RelA / SpoT proteins LNN95_RS18175 PF02824 TGS domain LNN95_RS18180 PF01192 RNA polymerase Rpb6 LNN95_RS18185 PF00625 Guanylate kinase LNN95_RS18195 PF13247 4Fe-4S dicluster domain LNN95_RS18195 PF12800 4Fe-4S binding domain LNN95_RS18195 PF09163 Formate dehydrogenase N, transmembrane LNN95_RS18200 PF01292 Prokaryotic cytochrome b561 LNN95_RS18210 PF04216 Protein involved in formate dehydrogenase formation LNN95_RS18215 PF03841 L-seryl-tRNA selenium transferase LNN95_RS18215 PF12390 Selenocysteine synthase N terminal LNN95_RS18220 PF09107 Elongation factor SelB, winged helix LNN95_RS18220 PF03144 Elongation factor Tu domain 2 LNN95_RS18220 PF09106 Elongation factor SelB, winged helix LNN95_RS18220 PF00009 Elongation factor Tu GTP binding domain LNN95_RS18230 PF00586 AIR synthase related protein, N-terminal domain LNN95_RS18230 PF02769 AIR synthase related protein, C-terminal domain LNN95_RS18235 PF03755 YicC-like family, N-terminal region LNN95_RS18235 PF08340 Domain of unknown function (DUF1732) LNN95_RS18240 PF01138 3' exoribonuclease family, domain 1 LNN95_RS18240 PF03725 3' exoribonuclease family, domain 2 LNN95_RS18245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNN95_RS18250 PF01725 Ham1 family LNN95_RS18255 PF06969 HemN C-terminal domain LNN95_RS18255 PF04055 Radical SAM superfamily LNN95_RS18270 PF00557 Metallopeptidase family M24 LNN95_RS18275 PF05195 Aminopeptidase P, N-terminal domain LNN95_RS18275 PF00557 Metallopeptidase family M24 LNN95_RS18280 PF03695 Uncharacterised protein family (UPF0149) LNN95_RS18290 PF05164 Cell division protein ZapA LNN95_RS18300 PF01812 5-formyltetrahydrofolate cyclo-ligase family LNN95_RS18310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LNN95_RS18320 PF13369 Transglutaminase-like superfamily LNN95_RS18325 PF00301 Rubredoxin LNN95_RS18330 PF02581 Thiamine monophosphate synthase LNN95_RS18335 PF00202 Aminotransferase class-III LNN95_RS18340 PF00127 Copper binding proteins, plastocyanin/azurin family LNN95_RS18345 PF13419 Haloacid dehalogenase-like hydrolase LNN95_RS18350 PF00202 Aminotransferase class-III LNN95_RS18355 PF00027 Cyclic nucleotide-binding domain LNN95_RS18355 PF00520 Ion transport protein LNN95_RS18360 PF12889 Protein of unknown function (DUF3829) LNN95_RS18365 PF12889 Protein of unknown function (DUF3829) LNN95_RS18370 PF00106 short chain dehydrogenase LNN95_RS18390 PF01569 PAP2 superfamily LNN95_RS18400 PF02875 Mur ligase family, glutamate ligase domain LNN95_RS18400 PF08245 Mur ligase middle domain LNN95_RS18400 PF01225 Mur ligase family, catalytic domain LNN95_RS18410 PF00365 Phosphofructokinase LNN95_RS18425 PF03030 Inorganic H+ pyrophosphatase LNN95_RS18435 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS18440 PF01618 MotA/TolQ/ExbB proton channel family LNN95_RS18445 PF04304 Protein of unknown function (DUF454) LNN95_RS18450 PF01126 Heme oxygenase LNN95_RS18460 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS18460 PF00593 TonB dependent receptor LNN95_RS18480 PF00719 Inorganic pyrophosphatase LNN95_RS18490 PF00593 TonB dependent receptor LNN95_RS18490 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS18495 PF01965 DJ-1/PfpI family LNN95_RS18495 PF12833 Helix-turn-helix domain LNN95_RS18500 PF00072 Response regulator receiver domain LNN95_RS18500 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS18510 PF13667 ThiC-associated domain LNN95_RS18510 PF01964 Radical SAM ThiC family LNN95_RS18515 PF02028 BCCT, betaine/carnitine/choline family transporter LNN95_RS18525 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LNN95_RS18525 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LNN95_RS18530 PF00205 Thiamine pyrophosphate enzyme, central domain LNN95_RS18530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LNN95_RS18530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LNN95_RS18540 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS18545 PF00682 HMGL-like LNN95_RS18545 PF08502 LeuA allosteric (dimerisation) domain LNN95_RS18550 PF01209 ubiE/COQ5 methyltransferase family LNN95_RS18555 PF00330 Aconitase family (aconitate hydratase) LNN95_RS18560 PF00694 Aconitase C-terminal domain LNN95_RS18565 PF00180 Isocitrate/isopropylmalate dehydrogenase LNN95_RS18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS18575 PF03466 LysR substrate binding domain LNN95_RS18580 PF00873 AcrB/AcrD/AcrF family LNN95_RS18585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS18600 PF02321 Outer membrane efflux protein LNN95_RS18605 PF13520 Amino acid permease LNN95_RS18610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LNN95_RS18615 PF03279 Bacterial lipid A biosynthesis acyltransferase LNN95_RS18645 PF01515 Phosphate acetyl/butaryl transferase LNN95_RS18645 PF03949 Malic enzyme, NAD binding domain LNN95_RS18645 PF00390 Malic enzyme, N-terminal domain LNN95_RS18650 PF00375 Sodium:dicarboxylate symporter family LNN95_RS18660 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS18660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS18670 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS18670 PF00072 Response regulator receiver domain LNN95_RS18680 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS18680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS18680 PF08521 Two-component sensor kinase N-terminal LNN95_RS18685 PF00072 Response regulator receiver domain LNN95_RS18685 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS18695 PF03600 Citrate transporter LNN95_RS18700 PF00106 short chain dehydrogenase LNN95_RS18720 PF03193 RsgA GTPase LNN95_RS18725 PF00155 Aminotransferase class I and II LNN95_RS18740 PF01522 Polysaccharide deacetylase LNN95_RS18745 PF00462 Glutaredoxin LNN95_RS18760 PF00082 Subtilase family LNN95_RS18760 PF03797 Autotransporter beta-domain LNN95_RS18760 PF12951 Passenger-associated-transport-repeat LNN95_RS18765 PF01979 Amidohydrolase family LNN95_RS18770 PF01979 Amidohydrolase family LNN95_RS18770 PF00449 Urease alpha-subunit, N-terminal domain LNN95_RS18775 PF01323 DSBA-like thioredoxin domain LNN95_RS18780 PF02645 Uncharacterised protein, DegV family COG1307 LNN95_RS18795 PF02321 Outer membrane efflux protein LNN95_RS18800 PF13533 Biotin-lipoyl like LNN95_RS18815 PF03466 LysR substrate binding domain LNN95_RS18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS18830 PF00360 Phytochrome region LNN95_RS18830 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS18830 PF01590 GAF domain LNN95_RS18830 PF00563 EAL domain LNN95_RS18835 PF00756 Putative esterase LNN95_RS18845 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS18845 PF00107 Zinc-binding dehydrogenase LNN95_RS18850 PF02583 Metal-sensitive transcriptional repressor LNN95_RS18860 PF03466 LysR substrate binding domain LNN95_RS18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS18865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LNN95_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS18890 PF03466 LysR substrate binding domain LNN95_RS18895 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS18895 PF00107 Zinc-binding dehydrogenase LNN95_RS18900 PF04107 Glutamate-cysteine ligase family 2(GCS2) LNN95_RS18910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LNN95_RS18910 PF12833 Helix-turn-helix domain LNN95_RS18915 PF00753 Metallo-beta-lactamase superfamily LNN95_RS18915 PF10996 Beta-Casp domain LNN95_RS18915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LNN95_RS18920 PF01926 50S ribosome-binding GTPase LNN95_RS18925 PF00034 Cytochrome c LNN95_RS18930 PF01323 DSBA-like thioredoxin domain LNN95_RS18935 PF01323 DSBA-like thioredoxin domain LNN95_RS18945 PF00892 EamA-like transporter family LNN95_RS18950 PF01037 Lrp/AsnC ligand binding domain LNN95_RS18960 PF00593 TonB dependent receptor LNN95_RS18960 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS18965 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS18965 PF00593 TonB dependent receptor LNN95_RS18975 PF02472 Biopolymer transport protein ExbD/TolR LNN95_RS18980 PF01464 Transglycosylase SLT domain LNN95_RS18980 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LNN95_RS18990 PF01743 Poly A polymerase head domain LNN95_RS18990 PF12627 Probable RNA and SrmB- binding site of polymerase A LNN95_RS18990 PF01966 HD domain LNN95_RS19020 PF16168 Adhesin of bacterial autotransporter system, probable stalk LNN95_RS19020 PF03797 Autotransporter beta-domain LNN95_RS19020 PF13018 Extended Signal Peptide of Type V secretion system LNN95_RS19030 PF01979 Amidohydrolase family LNN95_RS19035 PF01380 SIS domain LNN95_RS19040 PF00356 Bacterial regulatory proteins, lacI family LNN95_RS19045 PF07690 Major Facilitator Superfamily LNN95_RS19050 PF02685 Glucokinase LNN95_RS19060 PF02838 Glycosyl hydrolase family 20, domain 2 LNN95_RS19060 PF07691 PA14 domain LNN95_RS19060 PF00728 Glycosyl hydrolase family 20, catalytic domain LNN95_RS19080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LNN95_RS19090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS19090 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS19095 PF00072 Response regulator receiver domain LNN95_RS19100 PF00360 Phytochrome region LNN95_RS19100 PF08446 PAS fold LNN95_RS19100 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS19100 PF01590 GAF domain LNN95_RS19105 PF04972 BON domain LNN95_RS19110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LNN95_RS19110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNN95_RS19115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LNN95_RS19115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LNN95_RS19130 PF11818 C-terminal domain of tail specific protease (DUF3340) LNN95_RS19130 PF00595 PDZ domain LNN95_RS19130 PF03572 Peptidase family S41 LNN95_RS19130 PF17804 Tail specific protease N-terminal domain LNN95_RS19135 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LNN95_RS19135 PF04055 Radical SAM superfamily LNN95_RS19140 PF03099 Biotin/lipoate A/B protein ligase family LNN95_RS19145 PF04359 Protein of unknown function (DUF493) LNN95_RS19155 PF07943 Penicillin-binding protein 5, C-terminal domain LNN95_RS19155 PF00768 D-alanyl-D-alanine carboxypeptidase LNN95_RS19160 PF03330 Lytic transglycolase LNN95_RS19160 PF05036 Sporulation related domain LNN95_RS19165 PF13406 Transglycosylase SLT domain LNN95_RS19170 PF02371 Transposase IS116/IS110/IS902 family LNN95_RS19170 PF01548 Transposase LNN95_RS19175 PF01098 Cell cycle protein LNN95_RS19180 PF01098 Cell cycle protein LNN95_RS19185 PF03717 Penicillin-binding Protein dimerisation domain LNN95_RS19185 PF00905 Penicillin binding protein transpeptidase domain LNN95_RS19195 PF04085 rod shape-determining protein MreC LNN95_RS19205 PF00294 pfkB family carbohydrate kinase LNN95_RS19220 PF11838 ERAP1-like C-terminal domain LNN95_RS19220 PF01433 Peptidase family M1 domain LNN95_RS19225 PF01209 ubiE/COQ5 methyltransferase family LNN95_RS19250 PF02321 Outer membrane efflux protein LNN95_RS19255 PF00873 AcrB/AcrD/AcrF family LNN95_RS19260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS19260 PF00529 HlyD membrane-fusion protein of T1SS LNN95_RS19265 PF08361 MAATS-type transcriptional repressor, C-terminal region LNN95_RS19265 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS19270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNN95_RS19270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LNN95_RS19275 PF07724 AAA domain (Cdc48 subfamily) LNN95_RS19275 PF10431 C-terminal, D2-small domain, of ClpB protein LNN95_RS19275 PF00004 ATPase family associated with various cellular activities (AAA) LNN95_RS19280 PF00227 Proteasome subunit LNN95_RS19290 PF00589 Phage integrase family LNN95_RS19290 PF02899 Phage integrase, N-terminal SAM-like domain LNN95_RS19300 PF01678 Diaminopimelate epimerase LNN95_RS19310 PF04304 Protein of unknown function (DUF454) LNN95_RS19315 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LNN95_RS19315 PF00326 Prolyl oligopeptidase family LNN95_RS19320 PF00155 Aminotransferase class I and II LNN95_RS19325 PF00326 Prolyl oligopeptidase family LNN95_RS19325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LNN95_RS19340 PF00528 Binding-protein-dependent transport system inner membrane component LNN95_RS19345 PF00005 ABC transporter LNN95_RS19345 PF09383 NIL domain LNN95_RS19350 PF00892 EamA-like transporter family LNN95_RS19355 PF04461 Protein of unknown function (DUF520) LNN95_RS19365 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS19365 PF00107 Zinc-binding dehydrogenase LNN95_RS19370 PF00171 Aldehyde dehydrogenase family LNN95_RS19385 PF01432 Peptidase family M3 LNN95_RS19395 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS19400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNN95_RS19415 PF01380 SIS domain LNN95_RS19420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS19425 PF00005 ABC transporter LNN95_RS19430 PF00005 ABC transporter LNN95_RS19430 PF02687 FtsX-like permease family LNN95_RS19430 PF12704 MacB-like periplasmic core domain LNN95_RS19435 PF02687 FtsX-like permease family LNN95_RS19435 PF12704 MacB-like periplasmic core domain LNN95_RS19445 PF00158 Sigma-54 interaction domain LNN95_RS19445 PF00072 Response regulator receiver domain LNN95_RS19445 PF02954 Bacterial regulatory protein, Fis family LNN95_RS19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS19450 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS19450 PF00989 PAS fold LNN95_RS19460 PF14602 Hexapeptide repeat of succinyl-transferase LNN95_RS19460 PF12804 MobA-like NTP transferase domain LNN95_RS19460 PF00132 Bacterial transferase hexapeptide (six repeats) LNN95_RS19470 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LNN95_RS19470 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LNN95_RS19475 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNN95_RS19475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNN95_RS19480 PF00231 ATP synthase LNN95_RS19485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNN95_RS19485 PF00306 ATP synthase alpha/beta chain, C terminal domain LNN95_RS19485 PF02874 ATP synthase alpha/beta family, beta-barrel domain LNN95_RS19490 PF00213 ATP synthase delta (OSCP) subunit LNN95_RS19495 PF00430 ATP synthase B/B' CF(0) LNN95_RS19500 PF00137 ATP synthase subunit C LNN95_RS19505 PF00119 ATP synthase A chain LNN95_RS19520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS19520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LNN95_RS19525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNN95_RS19525 PF00364 Biotin-requiring enzyme LNN95_RS19525 PF02817 e3 binding domain LNN95_RS19540 PF01266 FAD dependent oxidoreductase LNN95_RS19540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LNN95_RS19545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LNN95_RS19545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LNN95_RS19550 PF03180 NLPA lipoprotein LNN95_RS19570 PF03900 Porphobilinogen deaminase, C-terminal domain LNN95_RS19570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LNN95_RS19575 PF04397 LytTr DNA-binding domain LNN95_RS19575 PF00072 Response regulator receiver domain LNN95_RS19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS19580 PF06580 Histidine kinase LNN95_RS19585 PF02230 Phospholipase/Carboxylesterase LNN95_RS19590 PF13632 Glycosyl transferase family group 2 LNN95_RS19595 PF00593 TonB dependent receptor LNN95_RS19595 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS19605 PF10947 Protein of unknown function (DUF2628) LNN95_RS19610 PF02203 Tar ligand binding domain homologue LNN95_RS19610 PF00672 HAMP domain LNN95_RS19610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS19655 PF07690 Major Facilitator Superfamily LNN95_RS19660 PF08361 MAATS-type transcriptional repressor, C-terminal region LNN95_RS19660 PF00440 Bacterial regulatory proteins, tetR family LNN95_RS19670 PF03797 Autotransporter beta-domain LNN95_RS19670 PF12951 Passenger-associated-transport-repeat LNN95_RS19670 PF00082 Subtilase family LNN95_RS19680 PF17761 DUF1016 N-terminal domain LNN95_RS19680 PF06250 YhcG PDDEXK nuclease domain LNN95_RS19690 PF04002 RadC-like JAB domain LNN95_RS19740 PF13614 AAA domain LNN95_RS19755 PF10502 Signal peptidase, peptidase S26 LNN95_RS19765 PF00462 Glutaredoxin LNN95_RS19775 PF07690 Major Facilitator Superfamily LNN95_RS19780 PF13411 MerR HTH family regulatory protein LNN95_RS19785 PF02321 Outer membrane efflux protein LNN95_RS19790 PF00873 AcrB/AcrD/AcrF family LNN95_RS19795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS19800 PF01022 Bacterial regulatory protein, arsR family LNN95_RS19805 PF01545 Cation efflux family LNN95_RS19810 PF02583 Metal-sensitive transcriptional repressor LNN95_RS19815 PF07690 Major Facilitator Superfamily LNN95_RS19820 PF01022 Bacterial regulatory protein, arsR family LNN95_RS19825 PF00403 Heavy-metal-associated domain LNN95_RS19830 PF09278 MerR, DNA binding LNN95_RS19830 PF00376 MerR family regulatory protein LNN95_RS19835 PF00111 2Fe-2S iron-sulfur cluster binding domain LNN95_RS19850 PF01037 Lrp/AsnC ligand binding domain LNN95_RS19860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS19860 PF03466 LysR substrate binding domain LNN95_RS19875 PF02534 Type IV secretory system Conjugative DNA transfer LNN95_RS19885 PF00437 Type II/IV secretion system protein LNN95_RS19890 PF04956 TrbC/VIRB2 family LNN95_RS19900 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LNN95_RS19915 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LNN95_RS19930 PF03743 Bacterial conjugation TrbI-like protein LNN95_RS19940 PF07690 Major Facilitator Superfamily LNN95_RS19945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS19945 PF03466 LysR substrate binding domain LNN95_RS19950 PF07690 Major Facilitator Superfamily LNN95_RS19960 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS19960 PF00593 TonB dependent receptor LNN95_RS19985 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS19990 PF07681 DoxX LNN95_RS20015 PF01965 DJ-1/PfpI family LNN95_RS20015 PF12833 Helix-turn-helix domain LNN95_RS20020 PF00561 alpha/beta hydrolase fold LNN95_RS20095 PF13356 Arm DNA-binding domain LNN95_RS20095 PF00589 Phage integrase family LNN95_RS20105 PF04546 Sigma-70, non-essential region LNN95_RS20105 PF03979 Sigma-70 factor, region 1.1 LNN95_RS20105 PF00140 Sigma-70 factor, region 1.2 LNN95_RS20105 PF04542 Sigma-70 region 2 LNN95_RS20105 PF04539 Sigma-70 region 3 LNN95_RS20105 PF04545 Sigma-70, region 4 LNN95_RS20110 PF02580 D-Tyr-tRNA(Tyr) deacylase LNN95_RS20120 PF00925 GTP cyclohydrolase II LNN95_RS20140 PF00535 Glycosyl transferase family 2 LNN95_RS20155 PF01189 16S rRNA methyltransferase RsmB/F LNN95_RS20155 PF01029 NusB family LNN95_RS20160 PF00551 Formyl transferase LNN95_RS20160 PF02911 Formyl transferase, C-terminal domain LNN95_RS20165 PF01327 Polypeptide deformylase LNN95_RS20175 PF17782 DprA winged helix domain LNN95_RS20175 PF02481 DNA recombination-mediator protein A LNN95_RS20180 PF04361 Protein of unknown function (DUF494) LNN95_RS20195 PF06271 RDD family LNN95_RS20200 PF13368 Topoisomerase C-terminal repeat LNN95_RS20200 PF01751 Toprim domain LNN95_RS20200 PF01131 DNA topoisomerase LNN95_RS20205 PF01300 Telomere recombination LNN95_RS20230 PF01343 Peptidase family S49 LNN95_RS20235 PF01554 MatE LNN95_RS20250 PF00270 DEAD/DEAH box helicase LNN95_RS20250 PF00271 Helicase conserved C-terminal domain LNN95_RS20250 PF17764 3′ DNA-binding domain (3′BD) LNN95_RS20250 PF18074 Primosomal protein N C-terminal domain LNN95_RS20250 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LNN95_RS20255 PF00043 Glutathione S-transferase, C-terminal domain LNN95_RS20255 PF13417 Glutathione S-transferase, N-terminal domain LNN95_RS20265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LNN95_RS20275 PF01541 GIY-YIG catalytic domain LNN95_RS20280 PF03458 UPF0126 domain LNN95_RS20285 PF00793 DAHP synthetase I family LNN95_RS20305 PF01047 MarR family LNN95_RS20310 PF00672 HAMP domain LNN95_RS20310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS20310 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS20315 PF00072 Response regulator receiver domain LNN95_RS20315 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS20335 PF00118 TCP-1/cpn60 chaperonin family LNN95_RS20340 PF00166 Chaperonin 10 Kd subunit LNN95_RS20345 PF04231 Endonuclease I LNN95_RS20350 PF03091 CutA1 divalent ion tolerance protein LNN95_RS20355 PF02683 Cytochrome C biogenesis protein transmembrane region LNN95_RS20355 PF11412 Disulphide bond corrector protein DsbC LNN95_RS20360 PF08534 Redoxin LNN95_RS20365 PF00667 FAD binding domain LNN95_RS20365 PF00175 Oxidoreductase NAD-binding domain LNN95_RS20365 PF00258 Flavodoxin LNN95_RS20370 PF02203 Tar ligand binding domain homologue LNN95_RS20370 PF00672 HAMP domain LNN95_RS20370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS20375 PF00797 N-acetyltransferase LNN95_RS20385 PF00072 Response regulator receiver domain LNN95_RS20385 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS20390 PF07730 Histidine kinase LNN95_RS20400 PF03055 Retinal pigment epithelial membrane protein LNN95_RS20410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS20410 PF03466 LysR substrate binding domain LNN95_RS20425 PF00245 Alkaline phosphatase LNN95_RS20430 PF00768 D-alanyl-D-alanine carboxypeptidase LNN95_RS20430 PF07943 Penicillin-binding protein 5, C-terminal domain LNN95_RS20440 PF02525 Flavodoxin-like fold LNN95_RS20460 PF01220 Dehydroquinase class II LNN95_RS20470 PF00364 Biotin-requiring enzyme LNN95_RS20475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LNN95_RS20475 PF00289 Biotin carboxylase, N-terminal domain LNN95_RS20475 PF02785 Biotin carboxylase C-terminal domain LNN95_RS20500 PF02954 Bacterial regulatory protein, Fis family LNN95_RS20520 PF00782 Dual specificity phosphatase, catalytic domain LNN95_RS20525 PF12147 Putative methyltransferase LNN95_RS20525 PF12146 Serine aminopeptidase, S33 LNN95_RS20530 PF01066 CDP-alcohol phosphatidyltransferase LNN95_RS20535 PF02142 MGS-like domain LNN95_RS20535 PF01808 AICARFT/IMPCHase bienzyme LNN95_RS20545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LNN95_RS20545 PF02843 Phosphoribosylglycinamide synthetase, C domain LNN95_RS20545 PF02844 Phosphoribosylglycinamide synthetase, N domain LNN95_RS20555 PF05593 RHS Repeat LNN95_RS20555 PF03527 RHS protein LNN95_RS20560 PF00140 Sigma-70 factor, region 1.2 LNN95_RS20560 PF04542 Sigma-70 region 2 LNN95_RS20560 PF04545 Sigma-70, region 4 LNN95_RS20565 PF03167 Uracil DNA glycosylase superfamily LNN95_RS20570 PF00072 Response regulator receiver domain LNN95_RS20570 PF01339 CheB methylesterase LNN95_RS20575 PF18075 FtsX extracellular domain LNN95_RS20580 PF00005 ABC transporter LNN95_RS20585 PF00271 Helicase conserved C-terminal domain LNN95_RS20585 PF12300 ATP-dependent RNA helicase RhlB LNN95_RS20585 PF00270 DEAD/DEAH box helicase LNN95_RS20590 PF00085 Thioredoxin LNN95_RS20595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LNN95_RS20595 PF07498 Rho termination factor, N-terminal domain LNN95_RS20595 PF07497 Rho termination factor, RNA-binding domain LNN95_RS20600 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS20600 PF07694 5TMR of 5TMR-LYT LNN95_RS20610 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LNN95_RS20635 PF03971 Monomeric isocitrate dehydrogenase LNN95_RS20645 PF01476 LysM domain LNN95_RS20645 PF04972 BON domain LNN95_RS20650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LNN95_RS20650 PF14489 QueF-like protein LNN95_RS20655 PF01546 Peptidase family M20/M25/M40 LNN95_RS20655 PF07687 Peptidase dimerisation domain LNN95_RS20660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS20665 PF00873 AcrB/AcrD/AcrF family LNN95_RS20670 PF00873 AcrB/AcrD/AcrF family LNN95_RS20675 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS20675 PF00593 TonB dependent receptor LNN95_RS20680 PF12805 FUSC-like inner membrane protein yccS LNN95_RS20685 PF00106 short chain dehydrogenase LNN95_RS20690 PF07690 Major Facilitator Superfamily LNN95_RS20710 PF01548 Transposase LNN95_RS20710 PF02371 Transposase IS116/IS110/IS902 family LNN95_RS20720 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LNN95_RS20720 PF00293 NUDIX domain LNN95_RS20720 PF09297 NADH pyrophosphatase zinc ribbon domain LNN95_RS20725 PF01521 Iron-sulphur cluster biosynthesis LNN95_RS20745 PF00563 EAL domain LNN95_RS20745 PF00072 Response regulator receiver domain LNN95_RS20745 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS20750 PF00072 Response regulator receiver domain LNN95_RS20750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LNN95_RS20750 PF01627 Hpt domain LNN95_RS20750 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS20750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS20750 PF00672 HAMP domain LNN95_RS20755 PF00210 Ferritin-like domain LNN95_RS20770 PF00293 NUDIX domain LNN95_RS20785 PF00380 Ribosomal protein S9/S16 LNN95_RS20790 PF00572 Ribosomal protein L13 LNN95_RS20795 PF03232 Ubiquinone biosynthesis protein COQ7 LNN95_RS20800 PF00893 Small Multidrug Resistance protein LNN95_RS20805 PF02675 S-adenosylmethionine decarboxylase LNN95_RS20810 PF00325 Bacterial regulatory proteins, crp family LNN95_RS20810 PF00027 Cyclic nucleotide-binding domain LNN95_RS20815 PF01925 Sulfite exporter TauE/SafE LNN95_RS20825 PF00218 Indole-3-glycerol phosphate synthase LNN95_RS20830 PF02885 Glycosyl transferase family, helical bundle domain LNN95_RS20830 PF00591 Glycosyl transferase family, a/b domain LNN95_RS20835 PF00117 Glutamine amidotransferase class-I LNN95_RS20845 PF04715 Anthranilate synthase component I, N terminal region LNN95_RS20845 PF00425 chorismate binding enzyme LNN95_RS20860 PF00781 Diacylglycerol kinase catalytic domain LNN95_RS20870 PF00834 Ribulose-phosphate 3 epimerase family LNN95_RS20875 PF00226 DnaJ domain LNN95_RS20875 PF05099 Tellurite resistance protein TerB LNN95_RS20880 PF01259 SAICAR synthetase LNN95_RS20890 PF13244 Domain of unknown function (DUF4040) LNN95_RS20890 PF00361 Proton-conducting membrane transporter LNN95_RS20890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LNN95_RS20890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LNN95_RS20895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LNN95_RS20900 PF00361 Proton-conducting membrane transporter LNN95_RS20905 PF01899 Na+/H+ ion antiporter subunit LNN95_RS20910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LNN95_RS20915 PF03334 Na+/H+ antiporter subunit LNN95_RS20920 PF01699 Sodium/calcium exchanger protein LNN95_RS20935 PF04209 homogentisate 1,2-dioxygenase LNN95_RS20940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LNN95_RS20945 PF01047 MarR family LNN95_RS20960 PF00854 POT family LNN95_RS20965 PF03301 Tryptophan 2,3-dioxygenase LNN95_RS20970 PF00676 Dehydrogenase E1 component LNN95_RS20975 PF02780 Transketolase, C-terminal domain LNN95_RS20975 PF02779 Transketolase, pyrimidine binding domain LNN95_RS20985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LNN95_RS20985 PF00364 Biotin-requiring enzyme LNN95_RS20985 PF02817 e3 binding domain LNN95_RS20995 PF08279 HTH domain LNN95_RS20995 PF13280 WYL domain LNN95_RS21005 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS21010 PF05661 Protein of unknown function (DUF808) LNN95_RS21015 PF03109 ABC1 family LNN95_RS21020 PF00884 Sulfatase LNN95_RS21025 PF12795 Mechanosensitive ion channel porin domain LNN95_RS21025 PF00924 Mechanosensitive ion channel LNN95_RS21025 PF12794 Mechanosensitive ion channel inner membrane domain 1 LNN95_RS21040 PF04324 BFD-like [2Fe-2S] binding domain LNN95_RS21040 PF01266 FAD dependent oxidoreductase LNN95_RS21060 PF00072 Response regulator receiver domain LNN95_RS21060 PF00486 Transcriptional regulatory protein, C terminal LNN95_RS21065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS21075 PF17810 Arginine decarboxylase helical bundle domain LNN95_RS21075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LNN95_RS21075 PF17944 Arginine decarboxylase C-terminal helical extension LNN95_RS21080 PF17284 Spermidine synthase tetramerisation domain LNN95_RS21095 PF00543 Nitrogen regulatory protein P-II LNN95_RS21100 PF04380 Membrane fusogenic activity LNN95_RS21120 PF00005 ABC transporter LNN95_RS21120 PF02687 FtsX-like permease family LNN95_RS21120 PF12704 MacB-like periplasmic core domain LNN95_RS21125 PF12704 MacB-like periplasmic core domain LNN95_RS21125 PF02687 FtsX-like permease family LNN95_RS21125 PF00005 ABC transporter LNN95_RS21155 PF13335 Magnesium chelatase, subunit ChlI C-terminal LNN95_RS21155 PF01078 Magnesium chelatase, subunit ChlI LNN95_RS21180 PF06055 Exopolysaccharide synthesis, ExoD LNN95_RS21185 PF07995 Glucose / Sorbosone dehydrogenase LNN95_RS21195 PF01483 Proprotein convertase P-domain LNN95_RS21195 PF00082 Subtilase family LNN95_RS21205 PF02630 SCO1/SenC LNN95_RS21210 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LNN95_RS21215 PF00510 Cytochrome c oxidase subunit III LNN95_RS21220 PF00115 Cytochrome C and Quinol oxidase polypeptide I LNN95_RS21225 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LNN95_RS21225 PF06481 COX Aromatic Rich Motif LNN95_RS21230 PF00155 Aminotransferase class I and II LNN95_RS21230 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS21245 PF00392 Bacterial regulatory proteins, gntR family LNN95_RS21245 PF00155 Aminotransferase class I and II LNN95_RS21260 PF12833 Helix-turn-helix domain LNN95_RS21275 PF04536 TPM domain LNN95_RS21300 PF02667 Short chain fatty acid transporter LNN95_RS21305 PF01040 UbiA prenyltransferase family LNN95_RS21310 PF13614 AAA domain LNN95_RS21310 PF13807 G-rich domain on putative tyrosine kinase LNN95_RS21310 PF02706 Chain length determinant protein LNN95_RS21315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LNN95_RS21315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LNN95_RS21315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LNN95_RS21320 PF16363 GDP-mannose 4,6 dehydratase LNN95_RS21340 PF00534 Glycosyl transferases group 1 LNN95_RS21340 PF13439 Glycosyltransferase Family 4 LNN95_RS21350 PF00293 NUDIX domain LNN95_RS21355 PF01370 NAD dependent epimerase/dehydratase family LNN95_RS21375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LNN95_RS21380 PF00593 TonB dependent receptor LNN95_RS21380 PF07715 TonB-dependent Receptor Plug Domain LNN95_RS21385 PF16338 Domain of unknown function (DUF4968) LNN95_RS21385 PF17137 Domain of unknown function (DUF5110) LNN95_RS21385 PF01055 Glycosyl hydrolases family 31 LNN95_RS21390 PF01380 SIS domain LNN95_RS21395 PF00480 ROK family LNN95_RS21400 PF08013 Tagatose 6 phosphate kinase LNN95_RS21405 PF00455 DeoR C terminal sensor domain LNN95_RS21405 PF08220 DeoR-like helix-turn-helix domain LNN95_RS21410 PF01979 Amidohydrolase family LNN95_RS21415 PF00083 Sugar (and other) transporter LNN95_RS21430 PF00156 Phosphoribosyl transferase domain LNN95_RS21440 PF00654 Voltage gated chloride channel LNN95_RS21450 PF06968 Biotin and Thiamin Synthesis associated domain LNN95_RS21450 PF04055 Radical SAM superfamily LNN95_RS21455 PF00155 Aminotransferase class I and II LNN95_RS21460 PF12697 Alpha/beta hydrolase family LNN95_RS21465 PF00106 short chain dehydrogenase LNN95_RS21470 PF13649 Methyltransferase domain LNN95_RS21480 PF00291 Pyridoxal-phosphate dependent enzyme LNN95_RS21490 PF01134 Glucose inhibited division protein A LNN95_RS21490 PF13932 GidA associated domain LNN95_RS21495 PF00132 Bacterial transferase hexapeptide (six repeats) LNN95_RS21520 PF07726 ATPase family associated with various cellular activities (AAA) LNN95_RS21520 PF17863 AAA lid domain LNN95_RS21535 PF03738 Glutathionylspermidine synthase preATP-grasp LNN95_RS21545 PF00920 Dehydratase family LNN95_RS21555 PF06733 DEAD_2 LNN95_RS21555 PF13307 Helicase C-terminal domain LNN95_RS21565 PF01488 Shikimate / quinate 5-dehydrogenase LNN95_RS21565 PF08501 Shikimate dehydrogenase substrate binding domain LNN95_RS21565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LNN95_RS21580 PF00490 Delta-aminolevulinic acid dehydratase LNN95_RS21585 PF01062 Bestrophin, RFP-TM, chloride channel LNN95_RS21620 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LNN95_RS21620 PF00326 Prolyl oligopeptidase family LNN95_RS21625 PF00043 Glutathione S-transferase, C-terminal domain LNN95_RS21625 PF02798 Glutathione S-transferase, N-terminal domain LNN95_RS21630 PF03350 Uncharacterized protein family, UPF0114 LNN95_RS21645 PF12833 Helix-turn-helix domain LNN95_RS21645 PF02311 AraC-like ligand binding domain LNN95_RS21660 PF00005 ABC transporter LNN95_RS21665 PF00561 alpha/beta hydrolase fold LNN95_RS21670 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS21680 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNN95_RS21680 PF18416 N-acetylglucosamine binding protein domain 2 LNN95_RS21685 PF18416 N-acetylglucosamine binding protein domain 2 LNN95_RS21685 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LNN95_RS21690 PF00970 Oxidoreductase FAD-binding domain LNN95_RS21690 PF00111 2Fe-2S iron-sulfur cluster binding domain LNN95_RS21690 PF00175 Oxidoreductase NAD-binding domain LNN95_RS21695 PF00005 ABC transporter LNN95_RS21700 PF01061 ABC-2 type transporter LNN95_RS21715 PF02558 Ketopantoate reductase PanE/ApbA LNN95_RS21715 PF08546 Ketopantoate reductase PanE/ApbA C terminal LNN95_RS21725 PF01026 TatD related DNase LNN95_RS21730 PF00270 DEAD/DEAH box helicase LNN95_RS21730 PF00271 Helicase conserved C-terminal domain LNN95_RS21730 PF08482 ATP-dependent helicase C-terminal LNN95_RS21730 PF04408 Helicase associated domain (HA2) LNN95_RS21740 PF00849 RNA pseudouridylate synthase LNN95_RS21755 PF00248 Aldo/keto reductase family LNN95_RS21770 PF01139 tRNA-splicing ligase RtcB LNN95_RS21785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS21785 PF00672 HAMP domain LNN95_RS21790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS21790 PF03466 LysR substrate binding domain LNN95_RS21795 PF07690 Major Facilitator Superfamily LNN95_RS21800 PF00248 Aldo/keto reductase family LNN95_RS21805 PF00561 alpha/beta hydrolase fold LNN95_RS21810 PF01906 Putative heavy-metal-binding LNN95_RS21815 PF00583 Acetyltransferase (GNAT) family LNN95_RS21815 PF13607 Succinyl-CoA ligase like flavodoxin domain LNN95_RS21815 PF13380 CoA binding domain LNN95_RS21820 PF01769 Divalent cation transporter LNN95_RS21820 PF03448 MgtE intracellular N domain LNN95_RS21820 PF00571 CBS domain LNN95_RS21825 PF02254 TrkA-N domain LNN95_RS21825 PF00999 Sodium/hydrogen exchanger family LNN95_RS21835 PF05166 YcgL domain LNN95_RS21845 PF02801 Beta-ketoacyl synthase, C-terminal domain LNN95_RS21845 PF00109 Beta-ketoacyl synthase, N-terminal domain LNN95_RS21860 PF00109 Beta-ketoacyl synthase, N-terminal domain LNN95_RS21860 PF02801 Beta-ketoacyl synthase, C-terminal domain LNN95_RS21870 PF01494 FAD binding domain LNN95_RS21890 PF00221 Aromatic amino acid lyase LNN95_RS21900 PF00535 Glycosyl transferase family 2 LNN95_RS21915 PF00550 Phosphopantetheine attachment site LNN95_RS21920 PF00550 Phosphopantetheine attachment site LNN95_RS21935 PF02322 Cytochrome bd terminal oxidase subunit II LNN95_RS21940 PF01654 Cytochrome bd terminal oxidase subunit I LNN95_RS21950 PF04542 Sigma-70 region 2 LNN95_RS21950 PF08281 Sigma-70, region 4 LNN95_RS21965 PF00293 NUDIX domain LNN95_RS21985 PF01218 Coproporphyrinogen III oxidase LNN95_RS21995 PF04239 Protein of unknown function (DUF421) LNN95_RS22000 PF01612 3'-5' exonuclease LNN95_RS22000 PF00476 DNA polymerase family A LNN95_RS22000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LNN95_RS22000 PF01367 5'-3' exonuclease, C-terminal SAM fold LNN95_RS22010 PF00582 Universal stress protein family LNN95_RS22030 PF13361 UvrD-like helicase C-terminal domain LNN95_RS22030 PF00580 UvrD/REP helicase N-terminal domain LNN95_RS22040 PF13396 Phospholipase_D-nuclease N-terminal LNN95_RS22040 PF13091 PLD-like domain LNN95_RS22045 PF00471 Ribosomal protein L33 LNN95_RS22050 PF00830 Ribosomal L28 family LNN95_RS22055 PF00929 Exonuclease LNN95_RS22060 PF03466 LysR substrate binding domain LNN95_RS22060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS22065 PF01042 Endoribonuclease L-PSP LNN95_RS22075 PF02321 Outer membrane efflux protein LNN95_RS22080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LNN95_RS22085 PF00873 AcrB/AcrD/AcrF family LNN95_RS22100 PF00535 Glycosyl transferase family 2 LNN95_RS22105 PF01370 NAD dependent epimerase/dehydratase family LNN95_RS22115 PF02195 ParB-like nuclease domain LNN95_RS22115 PF17762 HTH domain found in ParB protein LNN95_RS22120 PF13614 AAA domain LNN95_RS22125 PF02527 rRNA small subunit methyltransferase G LNN95_RS22130 PF01648 4'-phosphopantetheinyl transferase superfamily LNN95_RS22135 PF04226 Transglycosylase associated protein LNN95_RS22145 PF00171 Aldehyde dehydrogenase family LNN95_RS22165 PF08946 Osmosensory transporter coiled coil LNN95_RS22165 PF00083 Sugar (and other) transporter LNN95_RS22175 PF13193 AMP-binding enzyme C-terminal domain LNN95_RS22175 PF00501 AMP-binding enzyme LNN95_RS22175 PF16177 Acetyl-coenzyme A synthetase N-terminus LNN95_RS22180 PF00196 Bacterial regulatory proteins, luxR family LNN95_RS22180 PF00072 Response regulator receiver domain LNN95_RS22190 PF02659 Putative manganese efflux pump LNN95_RS22195 PF00072 Response regulator receiver domain LNN95_RS22195 PF09456 RcsC Alpha-Beta-Loop (ABL) LNN95_RS22195 PF00512 His Kinase A (phospho-acceptor) domain LNN95_RS22195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LNN95_RS22200 PF10459 Peptidase S46 LNN95_RS22205 PF04357 TamB, inner membrane protein subunit of TAM complex LNN95_RS22210 PF01103 Surface antigen LNN95_RS22210 PF17243 POTRA domain TamA domain 1 LNN95_RS22210 PF07244 Surface antigen variable number repeat LNN95_RS22215 PF05746 DALR anticodon binding domain LNN95_RS22215 PF02092 Glycyl-tRNA synthetase beta subunit LNN95_RS22220 PF02091 Glycyl-tRNA synthetase alpha subunit LNN95_RS22225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LNN95_RS22225 PF00437 Type II/IV secretion system protein LNN95_RS22230 PF00958 GMP synthase C terminal domain LNN95_RS22230 PF00117 Glutamine amidotransferase class-I LNN95_RS22240 PF00902 Sec-independent protein translocase protein (TatC) LNN95_RS22245 PF02416 mttA/Hcf106 family LNN95_RS22250 PF02416 mttA/Hcf106 family LNN95_RS22260 PF00762 Ferrochelatase LNN95_RS22265 PF12697 Alpha/beta hydrolase family LNN95_RS22270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LNN95_RS22270 PF00672 HAMP domain LNN95_RS22270 PF02203 Tar ligand binding domain homologue LNN95_RS22325 PF03594 Benzoate membrane transport protein LNN95_RS22335 PF01263 Aldose 1-epimerase LNN95_RS22340 PF13406 Transglycosylase SLT domain LNN95_RS22345 PF10017 Histidine-specific methyltransferase, SAM-dependent LNN95_RS22350 PF03781 Sulfatase-modifying factor enzyme 1 LNN95_RS22350 PF12867 DinB superfamily LNN95_RS22355 PF00990 Diguanylate cyclase, GGDEF domain LNN95_RS22360 PF02810 SEC-C motif LNN95_RS22365 PF01925 Sulfite exporter TauE/SafE LNN95_RS22385 PF01227 GTP cyclohydrolase I LNN95_RS22395 PF07869 Protein of unknown function (DUF1656) LNN95_RS22400 PF13533 Biotin-lipoyl like LNN95_RS22405 PF02321 Outer membrane efflux protein LNN95_RS22410 PF04632 Fusaric acid resistance protein family LNN95_RS22425 PF13538 UvrD-like helicase C-terminal domain LNN95_RS22430 PF00580 UvrD/REP helicase N-terminal domain LNN95_RS22430 PF12705 PD-(D/E)XK nuclease superfamily LNN95_RS22430 PF13361 UvrD-like helicase C-terminal domain LNN95_RS22435 PF17946 RecC C-terminal domain LNN95_RS22440 PF00005 ABC transporter LNN95_RS22445 PF02405 Permease MlaE LNN95_RS22450 PF02470 MlaD protein LNN95_RS22465 PF04333 MlaA lipoprotein LNN95_RS22470 PF00255 Glutathione peroxidase LNN95_RS22480 PF02646 RmuC family LNN95_RS22485 PF00043 Glutathione S-transferase, C-terminal domain LNN95_RS22485 PF13417 Glutathione S-transferase, N-terminal domain LNN95_RS22490 PF00107 Zinc-binding dehydrogenase LNN95_RS22490 PF08240 Alcohol dehydrogenase GroES-like domain LNN95_RS22495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS22495 PF03466 LysR substrate binding domain LNN95_RS22500 PF01810 LysE type translocator LNN95_RS22510 PF03466 LysR substrate binding domain LNN95_RS22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LNN95_RS22515 PF00248 Aldo/keto reductase family LNN95_RS22520 PF13520 Amino acid permease LNN95_RS22530 PF10672 S-adenosylmethionine-dependent methyltransferase LNN95_RS22530 PF17785 PUA-like domain LNN95_RS22535 PF03741 Integral membrane protein TerC family LNN95_RS22540 PF01694 Rhomboid family LNN95_RS22545 PF03009 Glycerophosphoryl diester phosphodiesterase family LNN95_RS22560 PF01926 50S ribosome-binding GTPase LNN95_RS22560 PF12631 MnmE helical domain LNN95_RS22560 PF10396 GTP-binding protein TrmE N-terminus LNN95_RS22570 PF02096 60Kd inner membrane protein LNN95_RS22570 PF14849 YidC periplasmic domain LNN95_RS22575 PF00825 Ribonuclease P LNN95_RS22580 PF00468 Ribosomal protein L34 LNN95_RS22620 PF07963 Prokaryotic N-terminal methylation motif LNN95_RS22620 PF00114 Pilin (bacterial filament)