locus-tag class description CCR98_RS00005 PF11638 DnaA N-terminal domain CCR98_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CCR98_RS00005 PF00308 Bacterial dnaA protein CCR98_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CCR98_RS00010 PF02767 DNA polymerase III beta subunit, central domain CCR98_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CCR98_RS00015 PF02463 RecF/RecN/SMC N terminal domain CCR98_RS00020 PF01751 Toprim domain CCR98_RS00020 PF00204 DNA gyrase B CCR98_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS00020 PF18053 DNA gyrase B subunit insert domain CCR98_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CCR98_RS00025 PF02517 CPBP intramembrane metalloprotease CCR98_RS00030 PF01435 Peptidase family M48 CCR98_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal CCR98_RS00045 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS00050 PF02472 Biopolymer transport protein ExbD/TolR CCR98_RS00055 PF02472 Biopolymer transport protein ExbD/TolR CCR98_RS00060 PF13396 Phospholipase_D-nuclease N-terminal CCR98_RS00060 PF13091 PLD-like domain CCR98_RS00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CCR98_RS00075 PF04055 Radical SAM superfamily CCR98_RS00085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CCR98_RS00090 PF00155 Aminotransferase class I and II CCR98_RS00095 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS00095 PF00593 TonB dependent receptor CCR98_RS00110 PF02735 Ku70/Ku80 beta-barrel domain CCR98_RS00115 PF13298 DNA polymerase Ligase (LigD) CCR98_RS00115 PF04679 ATP dependent DNA ligase C terminal region CCR98_RS00115 PF01068 ATP dependent DNA ligase domain CCR98_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS00125 PF00107 Zinc-binding dehydrogenase CCR98_RS00130 PF01081 KDPG and KHG aldolase CCR98_RS00140 PF00356 Bacterial regulatory proteins, lacI family CCR98_RS00145 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CCR98_RS00150 PF01037 Lrp/AsnC ligand binding domain CCR98_RS00155 PF01734 Patatin-like phospholipase CCR98_RS00170 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS00170 PF00593 TonB dependent receptor CCR98_RS00175 PF01569 PAP2 superfamily CCR98_RS00190 PF00005 ABC transporter CCR98_RS00210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCR98_RS00210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCR98_RS00210 PF06827 Zinc finger found in FPG and IleRS CCR98_RS00215 PF04349 Periplasmic glucan biosynthesis protein, MdoG CCR98_RS00220 PF00265 Thymidine kinase CCR98_RS00230 PF13361 UvrD-like helicase C-terminal domain CCR98_RS00230 PF00580 UvrD/REP helicase N-terminal domain CCR98_RS00240 PF04337 Protein of unknown function, DUF480 CCR98_RS00245 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CCR98_RS00250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CCR98_RS00255 PF00089 Trypsin CCR98_RS00265 PF01553 Acyltransferase CCR98_RS00275 PF01171 PP-loop family CCR98_RS00280 PF04381 Putative exonuclease, RdgC CCR98_RS00290 PF02142 MGS-like domain CCR98_RS00295 PF01627 Hpt domain CCR98_RS00295 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS00295 PF00989 PAS fold CCR98_RS00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS00295 PF00072 Response regulator receiver domain CCR98_RS00295 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCR98_RS00300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS00300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCR98_RS00305 PF01645 Conserved region in glutamate synthase CCR98_RS00305 PF04898 Glutamate synthase central domain CCR98_RS00305 PF01493 GXGXG motif CCR98_RS00305 PF00310 Glutamine amidotransferases class-II CCR98_RS00340 PF00144 Beta-lactamase CCR98_RS00370 PF09369 Domain of unknown function (DUF1998) CCR98_RS00370 PF00270 DEAD/DEAH box helicase CCR98_RS00370 PF00271 Helicase conserved C-terminal domain CCR98_RS00400 PF01882 Protein of unknown function DUF58 CCR98_RS00405 PF17863 AAA lid domain CCR98_RS00405 PF07726 ATPase family associated with various cellular activities (AAA) CCR98_RS00425 PF01523 Putative modulator of DNA gyrase CCR98_RS00435 PF13657 HipA N-terminal domain CCR98_RS00435 PF07804 HipA-like C-terminal domain CCR98_RS00455 PF01434 Peptidase family M41 CCR98_RS00455 PF17862 AAA+ lid domain CCR98_RS00455 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS00475 PF13091 PLD-like domain CCR98_RS00480 PF03061 Thioesterase superfamily CCR98_RS00485 PF01553 Acyltransferase CCR98_RS00500 PF01161 Phosphatidylethanolamine-binding protein CCR98_RS00515 PF02673 Bacitracin resistance protein BacA CCR98_RS00520 PF03951 Glutamine synthetase, beta-Grasp domain CCR98_RS00520 PF00120 Glutamine synthetase, catalytic domain CCR98_RS00525 PF00543 Nitrogen regulatory protein P-II CCR98_RS00530 PF00909 Ammonium Transporter Family CCR98_RS00540 PF06725 3D domain CCR98_RS00540 PF03562 MltA specific insert domain CCR98_RS00580 PF00816 H-NS histone family CCR98_RS00590 PF02028 BCCT, betaine/carnitine/choline family transporter CCR98_RS00595 PF10011 Predicted membrane protein (DUF2254) CCR98_RS00610 PF01925 Sulfite exporter TauE/SafE CCR98_RS00615 PF00753 Metallo-beta-lactamase superfamily CCR98_RS00615 PF04273 Putative phosphatase (DUF442) CCR98_RS00625 PF04143 Sulphur transport CCR98_RS00630 PF00753 Metallo-beta-lactamase superfamily CCR98_RS00660 PF00989 PAS fold CCR98_RS00660 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS00665 PF02954 Bacterial regulatory protein, Fis family CCR98_RS00665 PF00072 Response regulator receiver domain CCR98_RS00665 PF00158 Sigma-54 interaction domain CCR98_RS00670 PF00080 Copper/zinc superoxide dismutase (SODC) CCR98_RS00675 PF00080 Copper/zinc superoxide dismutase (SODC) CCR98_RS00685 PF00108 Thiolase, N-terminal domain CCR98_RS00685 PF02803 Thiolase, C-terminal domain CCR98_RS00720 PF02556 Preprotein translocase subunit SecB CCR98_RS00725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CCR98_RS00725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CCR98_RS00775 PF07804 HipA-like C-terminal domain CCR98_RS00775 PF13657 HipA N-terminal domain CCR98_RS00805 PF12833 Helix-turn-helix domain CCR98_RS00815 PF04261 Dyp-type peroxidase family CCR98_RS00855 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS00855 PF00072 Response regulator receiver domain CCR98_RS00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS00860 PF00072 Response regulator receiver domain CCR98_RS00860 PF00989 PAS fold CCR98_RS00860 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCR98_RS00860 PF01627 Hpt domain CCR98_RS00860 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS00875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS00875 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS00875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCR98_RS00880 PF00588 SpoU rRNA Methylase family CCR98_RS00890 PF05193 Peptidase M16 inactive domain CCR98_RS00890 PF00675 Insulinase (Peptidase family M16) CCR98_RS00900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCR98_RS00900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCR98_RS00905 PF00561 alpha/beta hydrolase fold CCR98_RS00915 PF00501 AMP-binding enzyme CCR98_RS00920 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CCR98_RS00930 PF07478 D-ala D-ala ligase C-terminus CCR98_RS00930 PF01820 D-ala D-ala ligase N-terminus CCR98_RS00940 PF03109 ABC1 family CCR98_RS00945 PF01596 O-methyltransferase CCR98_RS00950 PF04287 tRNA pseudouridine synthase C CCR98_RS00950 PF00849 RNA pseudouridylate synthase CCR98_RS00960 PF00472 RF-1 domain CCR98_RS00970 PF01432 Peptidase family M3 CCR98_RS00985 PF10502 Signal peptidase, peptidase S26 CCR98_RS00990 PF07690 Major Facilitator Superfamily CCR98_RS00995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS00995 PF03466 LysR substrate binding domain CCR98_RS01000 PF03466 LysR substrate binding domain CCR98_RS01000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS01005 PF01274 Malate synthase CCR98_RS01010 PF00463 Isocitrate lyase family CCR98_RS01015 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS01035 PF02785 Biotin carboxylase C-terminal domain CCR98_RS01035 PF00364 Biotin-requiring enzyme CCR98_RS01035 PF00289 Biotin carboxylase, N-terminal domain CCR98_RS01035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCR98_RS01040 PF01039 Carboxyl transferase domain CCR98_RS01045 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS01045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCR98_RS01045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS01075 PF03969 AFG1-like ATPase CCR98_RS01090 PF00317 Ribonucleotide reductase, all-alpha domain CCR98_RS01090 PF02867 Ribonucleotide reductase, barrel domain CCR98_RS01090 PF03477 ATP cone domain CCR98_RS01095 PF00268 Ribonucleotide reductase, small chain CCR98_RS01100 PF01810 LysE type translocator CCR98_RS01105 PF03061 Thioesterase superfamily CCR98_RS01110 PF02146 Sir2 family CCR98_RS01115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCR98_RS01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS01130 PF03466 LysR substrate binding domain CCR98_RS01135 PF00551 Formyl transferase CCR98_RS01140 PF00857 Isochorismatase family CCR98_RS01145 PF02677 Epoxyqueuosine reductase QueH CCR98_RS01155 PF00293 NUDIX domain CCR98_RS01155 PF01467 Cytidylyltransferase-like CCR98_RS01160 PF01734 Patatin-like phospholipase CCR98_RS01165 PF01381 Helix-turn-helix CCR98_RS01165 PF09856 Predicted transcriptional regulator (DUF2083) CCR98_RS01165 PF06114 IrrE N-terminal-like domain CCR98_RS01170 PF00171 Aldehyde dehydrogenase family CCR98_RS01175 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS01175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCR98_RS01175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS01180 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS01185 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS01190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCR98_RS01190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCR98_RS01195 PF02566 OsmC-like protein CCR98_RS01295 PF00916 Sulfate permease family CCR98_RS01295 PF01740 STAS domain CCR98_RS01315 PF01207 Dihydrouridine synthase (Dus) CCR98_RS01325 PF00072 Response regulator receiver domain CCR98_RS01325 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS01335 PF06167 Glucose-regulated metallo-peptidase M90 CCR98_RS01345 PF08279 HTH domain CCR98_RS01345 PF03099 Biotin/lipoate A/B protein ligase family CCR98_RS01345 PF02237 Biotin protein ligase C terminal domain CCR98_RS01350 PF03309 Type III pantothenate kinase CCR98_RS01395 PF00491 Arginase family CCR98_RS01405 PF05532 CsbD-like CCR98_RS01415 PF00579 tRNA synthetases class I (W and Y) CCR98_RS01425 PF00753 Metallo-beta-lactamase superfamily CCR98_RS01440 PF00083 Sugar (and other) transporter CCR98_RS01445 PF00892 EamA-like transporter family CCR98_RS01450 PF00892 EamA-like transporter family CCR98_RS01455 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS01455 PF00593 TonB dependent receptor CCR98_RS01465 PF12704 MacB-like periplasmic core domain CCR98_RS01465 PF02687 FtsX-like permease family CCR98_RS01465 PF00005 ABC transporter CCR98_RS01475 PF00005 ABC transporter CCR98_RS01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS01485 PF00005 ABC transporter CCR98_RS01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS01495 PF07730 Histidine kinase CCR98_RS01500 PF00072 Response regulator receiver domain CCR98_RS01500 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS01515 PF00883 Cytosol aminopeptidase family, catalytic domain CCR98_RS01515 PF02789 Cytosol aminopeptidase family, N-terminal domain CCR98_RS01525 PF01594 AI-2E family transporter CCR98_RS01545 PF00595 PDZ domain CCR98_RS01545 PF13180 PDZ domain CCR98_RS01560 PF07237 Protein of unknown function (DUF1428) CCR98_RS01565 PF00326 Prolyl oligopeptidase family CCR98_RS01565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CCR98_RS01590 PF07690 Major Facilitator Superfamily CCR98_RS01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS01595 PF03466 LysR substrate binding domain CCR98_RS01600 PF07308 Protein of unknown function (DUF1456) CCR98_RS01605 PF00106 short chain dehydrogenase CCR98_RS01615 PF05746 DALR anticodon binding domain CCR98_RS01615 PF03485 Arginyl tRNA synthetase N terminal domain CCR98_RS01615 PF00750 tRNA synthetases class I (R) CCR98_RS01620 PF04002 RadC-like JAB domain CCR98_RS01625 PF00072 Response regulator receiver domain CCR98_RS01625 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS01630 PF02441 Flavoprotein CCR98_RS01630 PF04127 DNA / pantothenate metabolism flavoprotein CCR98_RS01635 PF00692 dUTPase CCR98_RS01640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCR98_RS01640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCR98_RS01640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCR98_RS01640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCR98_RS01645 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS01645 PF00072 Response regulator receiver domain CCR98_RS01650 PF13493 Domain of unknown function (DUF4118) CCR98_RS01650 PF13492 GAF domain CCR98_RS01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS01650 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS01650 PF02702 Osmosensitive K+ channel His kinase sensor domain CCR98_RS01655 PF02669 K+-transporting ATPase, c chain CCR98_RS01665 PF03814 Potassium-transporting ATPase A subunit CCR98_RS01680 PF00156 Phosphoribosyl transferase domain CCR98_RS01685 PF03372 Endonuclease/Exonuclease/phosphatase family CCR98_RS01690 PF07690 Major Facilitator Superfamily CCR98_RS01700 PF03702 Anhydro-N-acetylmuramic acid kinase CCR98_RS01705 PF04225 Opacity-associated protein A LysM-like domain CCR98_RS01705 PF01551 Peptidase family M23 CCR98_RS01710 PF00579 tRNA synthetases class I (W and Y) CCR98_RS01770 PF04389 Peptidase family M28 CCR98_RS01780 PF01551 Peptidase family M23 CCR98_RS01785 PF03572 Peptidase family S41 CCR98_RS01785 PF13180 PDZ domain CCR98_RS01795 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CCR98_RS01800 PF04973 Nicotinamide mononucleotide transporter CCR98_RS01810 PF14850 DNA-binding domain of Proline dehydrogenase CCR98_RS01810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CCR98_RS01810 PF00171 Aldehyde dehydrogenase family CCR98_RS01810 PF01619 Proline dehydrogenase CCR98_RS01820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCR98_RS01820 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CCR98_RS01825 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCR98_RS01835 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CCR98_RS01840 PF00510 Cytochrome c oxidase subunit III CCR98_RS01850 PF02104 SURF1 family CCR98_RS01865 PF01040 UbiA prenyltransferase family CCR98_RS01875 PF13593 SBF-like CPA transporter family (DUF4137) CCR98_RS01885 PF01807 CHC2 zinc finger CCR98_RS01885 PF08275 DNA primase catalytic core, N-terminal domain CCR98_RS01885 PF08278 DNA primase DnaG DnaB-binding CCR98_RS01885 PF10410 DnaB-helicase binding domain of primase CCR98_RS01890 PF03631 Virulence factor BrkB CCR98_RS01900 PF01165 Ribosomal protein S21 CCR98_RS01905 PF00814 Glycoprotease family CCR98_RS01915 PF02152 Dihydroneopterin aldolase CCR98_RS01920 PF00924 Mechanosensitive ion channel CCR98_RS01925 PF00933 Glycosyl hydrolase family 3 N terminal domain CCR98_RS01925 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCR98_RS01925 PF14310 Fibronectin type III-like domain CCR98_RS01935 PF07995 Glucose / Sorbosone dehydrogenase CCR98_RS01940 PF05360 yiaA/B two helix domain CCR98_RS01950 PF13520 Amino acid permease CCR98_RS01960 PF01380 SIS domain CCR98_RS01960 PF01418 Helix-turn-helix domain, rpiR family CCR98_RS01965 PF13378 Enolase C-terminal domain-like CCR98_RS01965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCR98_RS01980 PF00593 TonB dependent receptor CCR98_RS01985 PF00144 Beta-lactamase CCR98_RS01990 PF01427 D-ala-D-ala dipeptidase CCR98_RS02015 PF07063 Domain of unknown function (DUF1338) CCR98_RS02020 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CCR98_RS02020 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CCR98_RS02025 PF03710 Glutamate-ammonia ligase adenylyltransferase CCR98_RS02025 PF08335 GlnD PII-uridylyltransferase CCR98_RS02030 PF02592 Putative vitamin uptake transporter CCR98_RS02060 PF00881 Nitroreductase family CCR98_RS02065 PF04264 YceI-like domain CCR98_RS02075 PF08021 Siderophore-interacting FAD-binding domain CCR98_RS02075 PF04954 Siderophore-interacting protein CCR98_RS02080 PF03551 Transcriptional regulator PadR-like family CCR98_RS02085 PF17831 Pyruvate dehydrogenase E1 component middle domain CCR98_RS02085 PF00456 Transketolase, thiamine diphosphate binding domain CCR98_RS02110 PF13099 Domain of unknown function (DUF3944) CCR98_RS02110 PF03981 Ubiquinol-cytochrome C chaperone CCR98_RS02135 PF00266 Aminotransferase class-V CCR98_RS02140 PF00266 Aminotransferase class-V CCR98_RS02190 PF13276 HTH-like domain CCR98_RS02190 PF13683 Integrase core domain CCR98_RS02265 PF00561 alpha/beta hydrolase fold CCR98_RS02285 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CCR98_RS02315 PF01545 Cation efflux family CCR98_RS02315 PF16916 Dimerisation domain of Zinc Transporter CCR98_RS02320 PF02583 Metal-sensitive transcriptional repressor CCR98_RS02330 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCR98_RS02330 PF07683 Cobalamin synthesis protein cobW C-terminal domain CCR98_RS02335 PF00005 ABC transporter CCR98_RS02335 PF12848 ABC transporter CCR98_RS02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS02340 PF03466 LysR substrate binding domain CCR98_RS02345 PF00144 Beta-lactamase CCR98_RS02350 PF07690 Major Facilitator Superfamily CCR98_RS02355 PF00563 EAL domain CCR98_RS02355 PF12792 CSS motif domain associated with EAL CCR98_RS02360 PF00324 Amino acid permease CCR98_RS02365 PF01464 Transglycosylase SLT domain CCR98_RS02390 PF06983 3-demethylubiquinone-9 3-methyltransferase CCR98_RS02400 PF07237 Protein of unknown function (DUF1428) CCR98_RS02405 PF04542 Sigma-70 region 2 CCR98_RS02405 PF08281 Sigma-70, region 4 CCR98_RS02435 PF06580 Histidine kinase CCR98_RS02435 PF07694 5TMR of 5TMR-LYT CCR98_RS02440 PF00072 Response regulator receiver domain CCR98_RS02440 PF04397 LytTr DNA-binding domain CCR98_RS02460 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS02470 PF07690 Major Facilitator Superfamily CCR98_RS02475 PF01431 Peptidase family M13 CCR98_RS02475 PF05649 Peptidase family M13 CCR98_RS02480 PF08448 PAS fold CCR98_RS02480 PF00563 EAL domain CCR98_RS02480 PF08447 PAS fold CCR98_RS02480 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS02485 PF03466 LysR substrate binding domain CCR98_RS02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS02495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CCR98_RS02500 PF00999 Sodium/hydrogen exchanger family CCR98_RS02525 PF00691 OmpA family CCR98_RS02525 PF13677 Membrane MotB of proton-channel complex MotA/MotB CCR98_RS02530 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS02535 PF01641 SelR domain CCR98_RS02550 PF01037 Lrp/AsnC ligand binding domain CCR98_RS02555 PF01266 FAD dependent oxidoreductase CCR98_RS02560 PF00842 Alanine racemase, C-terminal domain CCR98_RS02560 PF01168 Alanine racemase, N-terminal domain CCR98_RS02570 PF00672 HAMP domain CCR98_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS02570 PF00989 PAS fold CCR98_RS02570 PF18698 Histidine kinase sensor domain CCR98_RS02570 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS02585 PF05175 Methyltransferase small domain CCR98_RS02585 PF08468 Methyltransferase small domain N-terminal CCR98_RS02590 PF01479 S4 domain CCR98_RS02590 PF00849 RNA pseudouridylate synthase CCR98_RS02595 PF13419 Haloacid dehalogenase-like hydrolase CCR98_RS02600 PF02801 Beta-ketoacyl synthase, C-terminal domain CCR98_RS02600 PF00109 Beta-ketoacyl synthase, N-terminal domain CCR98_RS02605 PF07977 FabA-like domain CCR98_RS02610 PF11798 IMS family HHH motif CCR98_RS02610 PF11799 impB/mucB/samB family C-terminal domain CCR98_RS02610 PF00817 impB/mucB/samB family CCR98_RS02620 PF13460 NAD(P)H-binding CCR98_RS02625 PF03466 LysR substrate binding domain CCR98_RS02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS02630 PF08241 Methyltransferase domain CCR98_RS02635 PF13419 Haloacid dehalogenase-like hydrolase CCR98_RS02640 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS02640 PF00593 TonB dependent receptor CCR98_RS02655 PF13185 GAF domain CCR98_RS02665 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS02665 PF00155 Aminotransferase class I and II CCR98_RS02670 PF01625 Peptide methionine sulfoxide reductase CCR98_RS02675 PF17991 Thioredoxin like C-terminal domain CCR98_RS02675 PF02683 Cytochrome C biogenesis protein transmembrane region CCR98_RS02675 PF00578 AhpC/TSA family CCR98_RS02680 PF01641 SelR domain CCR98_RS02685 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS02685 PF00072 Response regulator receiver domain CCR98_RS02690 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS02690 PF00672 HAMP domain CCR98_RS02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS02690 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB CCR98_RS02690 PF08448 PAS fold CCR98_RS02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS02695 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS02695 PF00672 HAMP domain CCR98_RS02700 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS02700 PF00072 Response regulator receiver domain CCR98_RS02705 PF00733 Asparagine synthase CCR98_RS02705 PF13537 Glutamine amidotransferase domain CCR98_RS02715 PF01242 6-pyruvoyl tetrahydropterin synthase CCR98_RS02720 PF00593 TonB dependent receptor CCR98_RS02720 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS02730 PF00271 Helicase conserved C-terminal domain CCR98_RS02730 PF00270 DEAD/DEAH box helicase CCR98_RS02740 PF14497 Glutathione S-transferase, C-terminal domain CCR98_RS02740 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS02755 PF00437 Type II/IV secretion system protein CCR98_RS02775 PF00571 CBS domain CCR98_RS02775 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS02780 PF01053 Cys/Met metabolism PLP-dependent enzyme CCR98_RS02790 PF00005 ABC transporter CCR98_RS02790 PF14524 Wzt C-terminal domain CCR98_RS02810 PF13439 Glycosyltransferase Family 4 CCR98_RS02810 PF00534 Glycosyl transferases group 1 CCR98_RS02820 PF16363 GDP-mannose 4,6 dehydratase CCR98_RS02830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCR98_RS02835 PF00892 EamA-like transporter family CCR98_RS02845 PF00535 Glycosyl transferase family 2 CCR98_RS02850 PF01012 Electron transfer flavoprotein domain CCR98_RS02850 PF00766 Electron transfer flavoprotein FAD-binding domain CCR98_RS02855 PF01012 Electron transfer flavoprotein domain CCR98_RS02860 PF16363 GDP-mannose 4,6 dehydratase CCR98_RS02865 PF00483 Nucleotidyl transferase CCR98_RS02870 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CCR98_RS02875 PF04321 RmlD substrate binding domain CCR98_RS02880 PF01050 Mannose-6-phosphate isomerase CCR98_RS02880 PF00483 Nucleotidyl transferase CCR98_RS02885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCR98_RS02885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCR98_RS02885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCR98_RS02885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCR98_RS02890 PF01144 Coenzyme A transferase CCR98_RS02895 PF01144 Coenzyme A transferase CCR98_RS02915 PF00005 ABC transporter CCR98_RS02920 PF02405 Permease MlaE CCR98_RS02930 PF00816 H-NS histone family CCR98_RS02935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCR98_RS02935 PF03129 Anticodon binding domain CCR98_RS02935 PF04073 Aminoacyl-tRNA editing domain CCR98_RS02945 PF01066 CDP-alcohol phosphatidyltransferase CCR98_RS02955 PF00583 Acetyltransferase (GNAT) family CCR98_RS02965 PF10458 Valyl tRNA synthetase tRNA binding arm CCR98_RS02965 PF00133 tRNA synthetases class I (I, L, M and V) CCR98_RS02965 PF08264 Anticodon-binding domain of tRNA CCR98_RS02980 PF02789 Cytosol aminopeptidase family, N-terminal domain CCR98_RS02980 PF00883 Cytosol aminopeptidase family, catalytic domain CCR98_RS02990 PF03739 Lipopolysaccharide export system permease LptF/LptG CCR98_RS03000 PF00589 Phage integrase family CCR98_RS03000 PF02899 Phage integrase, N-terminal SAM-like domain CCR98_RS03005 PF10411 Disulfide bond isomerase protein N-terminus CCR98_RS03005 PF13098 Thioredoxin-like domain CCR98_RS03010 PF00041 Fibronectin type III domain CCR98_RS03010 PF00704 Glycosyl hydrolases family 18 CCR98_RS03010 PF00553 Cellulose binding domain CCR98_RS03015 PF01527 Transposase CCR98_RS03020 PF13276 HTH-like domain CCR98_RS03020 PF13333 Integrase core domain CCR98_RS03020 PF00665 Integrase core domain CCR98_RS03025 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CCR98_RS03025 PF02769 AIR synthase related protein, C-terminal domain CCR98_RS03025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CCR98_RS03030 PF03895 YadA-like membrane anchor domain CCR98_RS03030 PF05658 Head domain of trimeric autotransporter adhesin CCR98_RS03030 PF05662 Coiled stalk of trimeric autotransporter adhesin CCR98_RS03030 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS03035 PF00082 Subtilase family CCR98_RS03035 PF04151 Bacterial pre-peptidase C-terminal domain CCR98_RS03040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CCR98_RS03040 PF00437 Type II/IV secretion system protein CCR98_RS03045 PF00482 Type II secretion system (T2SS), protein F CCR98_RS03050 PF08334 Type II secretion system (T2SS), protein G CCR98_RS03055 PF12019 Type II transport protein GspH CCR98_RS03060 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS03070 PF03934 Type II secretion system (T2SS), protein K CCR98_RS03075 PF05137 Fimbrial assembly protein (PilN) CCR98_RS03080 PF10741 Type II secretion system (T2SS), protein M subtype b CCR98_RS03090 PF00263 Bacterial type II and III secretion system protein CCR98_RS03090 PF03958 Bacterial type II/III secretion system short domain CCR98_RS03100 PF00535 Glycosyl transferase family 2 CCR98_RS03105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CCR98_RS03105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CCR98_RS03115 PF16970 Type-1 fimbrial protein, A CCR98_RS03120 PF02753 Pili assembly chaperone PapD, C-terminal domain CCR98_RS03120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CCR98_RS03125 PF13953 PapC C-terminal domain CCR98_RS03125 PF13954 PapC N-terminal domain CCR98_RS03125 PF00577 Outer membrane usher protein CCR98_RS03135 PF02350 UDP-N-acetylglucosamine 2-epimerase CCR98_RS03145 PF13632 Glycosyl transferase family group 2 CCR98_RS03145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CCR98_RS03160 PF00860 Permease family CCR98_RS03165 PF12848 ABC transporter CCR98_RS03165 PF00005 ABC transporter CCR98_RS03175 PF00464 Serine hydroxymethyltransferase CCR98_RS03195 PF03477 ATP cone domain CCR98_RS03200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCR98_RS03200 PF01872 RibD C-terminal domain CCR98_RS03220 PF00677 Lumazine binding domain CCR98_RS03225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CCR98_RS03225 PF00925 GTP cyclohydrolase II CCR98_RS03230 PF00885 6,7-dimethyl-8-ribityllumazine synthase CCR98_RS03235 PF01029 NusB family CCR98_RS03240 PF02769 AIR synthase related protein, C-terminal domain CCR98_RS03240 PF00586 AIR synthase related protein, N-terminal domain CCR98_RS03255 PF03797 Autotransporter beta-domain CCR98_RS03260 PF03797 Autotransporter beta-domain CCR98_RS03270 PF01757 Acyltransferase family CCR98_RS03275 PF01565 FAD binding domain CCR98_RS03275 PF02913 FAD linked oxidases, C-terminal domain CCR98_RS03280 PF04307 LexA-binding, inner membrane-associated putative hydrolase CCR98_RS03285 PF02021 Uncharacterised protein family UPF0102 CCR98_RS03295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCR98_RS03315 PF02381 MraZ protein, putative antitoxin-like CCR98_RS03320 PF01795 MraW methylase family CCR98_RS03325 PF04999 Cell division protein FtsL CCR98_RS03330 PF00905 Penicillin binding protein transpeptidase domain CCR98_RS03330 PF03717 Penicillin-binding Protein dimerisation domain CCR98_RS03335 PF08245 Mur ligase middle domain CCR98_RS03335 PF02875 Mur ligase family, glutamate ligase domain CCR98_RS03335 PF01225 Mur ligase family, catalytic domain CCR98_RS03340 PF02875 Mur ligase family, glutamate ligase domain CCR98_RS03340 PF01225 Mur ligase family, catalytic domain CCR98_RS03340 PF08245 Mur ligase middle domain CCR98_RS03345 PF00953 Glycosyl transferase family 4 CCR98_RS03350 PF01098 Cell cycle protein CCR98_RS03355 PF04101 Glycosyltransferase family 28 C-terminal domain CCR98_RS03355 PF03033 Glycosyltransferase family 28 N-terminal domain CCR98_RS03360 PF08245 Mur ligase middle domain CCR98_RS03360 PF01225 Mur ligase family, catalytic domain CCR98_RS03360 PF02875 Mur ligase family, glutamate ligase domain CCR98_RS03365 PF01820 D-ala D-ala ligase N-terminus CCR98_RS03365 PF07478 D-ala D-ala ligase C-terminus CCR98_RS03370 PF08478 POTRA domain, FtsQ-type CCR98_RS03370 PF03799 Cell division protein FtsQ CCR98_RS03375 PF02491 SHS2 domain inserted in FTSA CCR98_RS03380 PF00091 Tubulin/FtsZ family, GTPase domain CCR98_RS03380 PF12327 FtsZ family, C-terminal domain CCR98_RS03385 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CCR98_RS03395 PF01476 LysM domain CCR98_RS03395 PF08525 Opacity-associated protein A N-terminal motif CCR98_RS03395 PF01551 Peptidase family M23 CCR98_RS03400 PF02810 SEC-C motif CCR98_RS03400 PF07517 SecA DEAD-like domain CCR98_RS03400 PF01043 SecA preprotein cross-linking domain CCR98_RS03400 PF07516 SecA Wing and Scaffold domain CCR98_RS03405 PF00293 NUDIX domain CCR98_RS03415 PF02219 Methylenetetrahydrofolate reductase CCR98_RS03420 PF00561 alpha/beta hydrolase fold CCR98_RS03425 PF06580 Histidine kinase CCR98_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS03425 PF13492 GAF domain CCR98_RS03425 PF07694 5TMR of 5TMR-LYT CCR98_RS03430 PF04397 LytTr DNA-binding domain CCR98_RS03430 PF00072 Response regulator receiver domain CCR98_RS03435 PF01979 Amidohydrolase family CCR98_RS03455 PF04073 Aminoacyl-tRNA editing domain CCR98_RS03460 PF07486 Cell Wall Hydrolase CCR98_RS03460 PF01471 Putative peptidoglycan binding domain CCR98_RS03470 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CCR98_RS03470 PF05221 S-adenosyl-L-homocysteine hydrolase CCR98_RS03480 PF00311 Phosphoenolpyruvate carboxylase CCR98_RS03485 PF03061 Thioesterase superfamily CCR98_RS03490 PF02772 S-adenosylmethionine synthetase, central domain CCR98_RS03490 PF02773 S-adenosylmethionine synthetase, C-terminal domain CCR98_RS03490 PF00438 S-adenosylmethionine synthetase, N-terminal domain CCR98_RS03510 PF13847 Methyltransferase domain CCR98_RS03515 PF01207 Dihydrouridine synthase (Dus) CCR98_RS03525 PF00294 pfkB family carbohydrate kinase CCR98_RS03525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CCR98_RS03530 PF01773 Na+ dependent nucleoside transporter N-terminus CCR98_RS03530 PF07662 Na+ dependent nucleoside transporter C-terminus CCR98_RS03530 PF07670 Nucleoside recognition CCR98_RS03535 PF00248 Aldo/keto reductase family CCR98_RS03545 PF00593 TonB dependent receptor CCR98_RS03545 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS03575 PF00005 ABC transporter CCR98_RS03580 PF13472 GDSL-like Lipase/Acylhydrolase family CCR98_RS03585 PF00072 Response regulator receiver domain CCR98_RS03585 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS03590 PF08521 Two-component sensor kinase N-terminal CCR98_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS03590 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS03600 PF01219 Prokaryotic diacylglycerol kinase CCR98_RS03605 PF03741 Integral membrane protein TerC family CCR98_RS03610 PF07690 Major Facilitator Superfamily CCR98_RS03615 PF04011 LemA family CCR98_RS03630 PF01790 Prolipoprotein diacylglyceryl transferase CCR98_RS03635 PF00303 Thymidylate synthase CCR98_RS03645 PF00186 Dihydrofolate reductase CCR98_RS03650 PF06940 Domain of unknown function (DUF1287) CCR98_RS03655 PF00149 Calcineurin-like phosphoesterase CCR98_RS03660 PF04379 ApaG domain CCR98_RS03665 PF00398 Ribosomal RNA adenine dimethylase CCR98_RS03670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CCR98_RS03675 PF09312 SurA N-terminal domain CCR98_RS03675 PF00639 PPIC-type PPIASE domain CCR98_RS03680 PF04453 LPS transport system D CCR98_RS03680 PF03968 OstA-like protein CCR98_RS03685 PF00850 Histone deacetylase domain CCR98_RS03690 PF01923 Cobalamin adenosyltransferase CCR98_RS03700 PF01494 FAD binding domain CCR98_RS03705 PF01494 FAD binding domain CCR98_RS03710 PF13202 EF hand CCR98_RS03710 PF00923 Transaldolase/Fructose-6-phosphate aldolase CCR98_RS03715 PF18125 RlmM ferredoxin-like domain CCR98_RS03715 PF01728 FtsJ-like methyltransferase CCR98_RS03735 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CCR98_RS03735 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCR98_RS03745 PF01625 Peptide methionine sulfoxide reductase CCR98_RS03750 PF00923 Transaldolase/Fructose-6-phosphate aldolase CCR98_RS03755 PF01272 Transcription elongation factor, GreA/GreB, C-term CCR98_RS03755 PF14760 Rnk N-terminus CCR98_RS03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS03760 PF03466 LysR substrate binding domain CCR98_RS03765 PF13192 Thioredoxin domain CCR98_RS03765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS03770 PF10417 C-terminal domain of 1-Cys peroxiredoxin CCR98_RS03770 PF00578 AhpC/TSA family CCR98_RS03775 PF17827 PrmC N-terminal domain CCR98_RS03775 PF05175 Methyltransferase small domain CCR98_RS03780 PF00561 alpha/beta hydrolase fold CCR98_RS03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS03785 PF03466 LysR substrate binding domain CCR98_RS03790 PF07690 Major Facilitator Superfamily CCR98_RS03805 PF00293 NUDIX domain CCR98_RS03810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCR98_RS03810 PF01612 3'-5' exonuclease CCR98_RS03810 PF00476 DNA polymerase family A CCR98_RS03810 PF01367 5'-3' exonuclease, C-terminal SAM fold CCR98_RS03825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CCR98_RS03825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CCR98_RS03825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CCR98_RS03845 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CCR98_RS03850 PF02233 NAD(P) transhydrogenase beta subunit CCR98_RS03860 PF01883 Iron-sulfur cluster assembly protein CCR98_RS03865 PF01063 Amino-transferase class IV CCR98_RS03870 PF00082 Subtilase family CCR98_RS03870 PF04151 Bacterial pre-peptidase C-terminal domain CCR98_RS03885 PF03358 NADPH-dependent FMN reductase CCR98_RS03890 PF03631 Virulence factor BrkB CCR98_RS03895 PF00578 AhpC/TSA family CCR98_RS03905 PF03976 Polyphosphate kinase 2 (PPK2) CCR98_RS03915 PF03462 PCRF domain CCR98_RS03915 PF00472 RF-1 domain CCR98_RS03920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CCR98_RS03920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CCR98_RS03920 PF01488 Shikimate / quinate 5-dehydrogenase CCR98_RS03930 PF03550 Outer membrane lipoprotein LolB CCR98_RS03935 PF08544 GHMP kinases C terminal CCR98_RS03935 PF00288 GHMP kinases N terminal domain CCR98_RS03945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CCR98_RS03945 PF14572 Phosphoribosyl synthetase-associated domain CCR98_RS03950 PF01386 Ribosomal L25p family CCR98_RS03950 PF14693 Ribosomal protein TL5, C-terminal domain CCR98_RS03955 PF01195 Peptidyl-tRNA hydrolase CCR98_RS03960 PF06071 Protein of unknown function (DUF933) CCR98_RS03960 PF01926 50S ribosome-binding GTPase CCR98_RS03965 PF03797 Autotransporter beta-domain CCR98_RS03965 PF12951 Passenger-associated-transport-repeat CCR98_RS03970 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS03970 PF00072 Response regulator receiver domain CCR98_RS03975 PF00072 Response regulator receiver domain CCR98_RS03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS03975 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS03975 PF09456 RcsC Alpha-Beta-Loop (ABL) CCR98_RS03980 PF01590 GAF domain CCR98_RS03980 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS03980 PF00563 EAL domain CCR98_RS03980 PF00989 PAS fold CCR98_RS03985 PF00072 Response regulator receiver domain CCR98_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS03985 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS03985 PF09456 RcsC Alpha-Beta-Loop (ABL) CCR98_RS03990 PF00593 TonB dependent receptor CCR98_RS03990 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS03995 PF03575 Peptidase family S51 CCR98_RS04000 PF01112 Asparaginase CCR98_RS04020 PF00009 Elongation factor Tu GTP binding domain CCR98_RS04020 PF03144 Elongation factor Tu domain 2 CCR98_RS04020 PF03143 Elongation factor Tu C-terminal domain CCR98_RS04030 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CCR98_RS04035 PF02357 Transcription termination factor nusG CCR98_RS04035 PF00467 KOW motif CCR98_RS04040 PF03946 Ribosomal protein L11, N-terminal domain CCR98_RS04040 PF00298 Ribosomal protein L11, RNA binding domain CCR98_RS04045 PF00687 Ribosomal protein L1p/L10e family CCR98_RS04050 PF00466 Ribosomal protein L10 CCR98_RS04055 PF00542 Ribosomal protein L7/L12 C-terminal domain CCR98_RS04055 PF16320 Ribosomal protein L7/L12 dimerisation domain CCR98_RS04060 PF00562 RNA polymerase Rpb2, domain 6 CCR98_RS04060 PF04563 RNA polymerase beta subunit CCR98_RS04060 PF04560 RNA polymerase Rpb2, domain 7 CCR98_RS04060 PF04561 RNA polymerase Rpb2, domain 2 CCR98_RS04060 PF10385 RNA polymerase beta subunit external 1 domain CCR98_RS04060 PF04565 RNA polymerase Rpb2, domain 3 CCR98_RS04065 PF00623 RNA polymerase Rpb1, domain 2 CCR98_RS04065 PF04983 RNA polymerase Rpb1, domain 3 CCR98_RS04065 PF05000 RNA polymerase Rpb1, domain 4 CCR98_RS04065 PF04998 RNA polymerase Rpb1, domain 5 CCR98_RS04065 PF04997 RNA polymerase Rpb1, domain 1 CCR98_RS04070 PF00164 Ribosomal protein S12/S23 CCR98_RS04075 PF00177 Ribosomal protein S7p/S5e CCR98_RS04080 PF00009 Elongation factor Tu GTP binding domain CCR98_RS04080 PF03144 Elongation factor Tu domain 2 CCR98_RS04080 PF00679 Elongation factor G C-terminus CCR98_RS04080 PF03764 Elongation factor G, domain IV CCR98_RS04080 PF14492 Elongation Factor G, domain II CCR98_RS04085 PF00009 Elongation factor Tu GTP binding domain CCR98_RS04085 PF03144 Elongation factor Tu domain 2 CCR98_RS04085 PF03143 Elongation factor Tu C-terminal domain CCR98_RS04090 PF00338 Ribosomal protein S10p/S20e CCR98_RS04095 PF00297 Ribosomal protein L3 CCR98_RS04100 PF00573 Ribosomal protein L4/L1 family CCR98_RS04105 PF00276 Ribosomal protein L23 CCR98_RS04110 PF03947 Ribosomal Proteins L2, C-terminal domain CCR98_RS04110 PF00181 Ribosomal Proteins L2, RNA binding domain CCR98_RS04115 PF00203 Ribosomal protein S19 CCR98_RS04120 PF00237 Ribosomal protein L22p/L17e CCR98_RS04125 PF07650 KH domain CCR98_RS04125 PF00189 Ribosomal protein S3, C-terminal domain CCR98_RS04130 PF00252 Ribosomal protein L16p/L10e CCR98_RS04135 PF00831 Ribosomal L29 protein CCR98_RS04140 PF00366 Ribosomal protein S17 CCR98_RS04145 PF00238 Ribosomal protein L14p/L23e CCR98_RS04150 PF00467 KOW motif CCR98_RS04150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CCR98_RS04155 PF00673 ribosomal L5P family C-terminus CCR98_RS04155 PF00281 Ribosomal protein L5 CCR98_RS04160 PF00253 Ribosomal protein S14p/S29e CCR98_RS04170 PF00410 Ribosomal protein S8 CCR98_RS04175 PF00347 Ribosomal protein L6 CCR98_RS04180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CCR98_RS04185 PF03719 Ribosomal protein S5, C-terminal domain CCR98_RS04185 PF00333 Ribosomal protein S5, N-terminal domain CCR98_RS04190 PF00327 Ribosomal protein L30p/L7e CCR98_RS04195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CCR98_RS04200 PF00344 SecY translocase CCR98_RS04205 PF00416 Ribosomal protein S13/S18 CCR98_RS04210 PF00411 Ribosomal protein S11 CCR98_RS04215 PF00163 Ribosomal protein S4/S9 N-terminal domain CCR98_RS04215 PF01479 S4 domain CCR98_RS04220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CCR98_RS04220 PF01000 RNA polymerase Rpb3/RpoA insert domain CCR98_RS04220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CCR98_RS04225 PF01196 Ribosomal protein L17 CCR98_RS04230 PF02600 Disulfide bond formation protein DsbB CCR98_RS04240 PF01474 Class-II DAHP synthetase family CCR98_RS04250 PF01425 Amidase CCR98_RS04260 PF00679 Elongation factor G C-terminus CCR98_RS04260 PF03144 Elongation factor Tu domain 2 CCR98_RS04260 PF00009 Elongation factor Tu GTP binding domain CCR98_RS04265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCR98_RS04270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CCR98_RS04270 PF00056 lactate/malate dehydrogenase, NAD binding domain CCR98_RS04275 PF00849 RNA pseudouridylate synthase CCR98_RS04280 PF13193 AMP-binding enzyme C-terminal domain CCR98_RS04280 PF00501 AMP-binding enzyme CCR98_RS04280 PF16177 Acetyl-coenzyme A synthetase N-terminus CCR98_RS04295 PF00043 Glutathione S-transferase, C-terminal domain CCR98_RS04295 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS04305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS04305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCR98_RS04315 PF00107 Zinc-binding dehydrogenase CCR98_RS04315 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS04320 PF00691 OmpA family CCR98_RS04320 PF05736 OprF membrane domain CCR98_RS04330 PF01479 S4 domain CCR98_RS04330 PF00849 RNA pseudouridylate synthase CCR98_RS04340 PF00155 Aminotransferase class I and II CCR98_RS04350 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS04350 PF00107 Zinc-binding dehydrogenase CCR98_RS04355 PF10459 Peptidase S46 CCR98_RS04360 PF00300 Histidine phosphatase superfamily (branch 1) CCR98_RS04365 PF08245 Mur ligase middle domain CCR98_RS04365 PF02875 Mur ligase family, glutamate ligase domain CCR98_RS04380 PF00156 Phosphoribosyl transferase domain CCR98_RS04385 PF04305 Protein of unknown function (DUF455) CCR98_RS04400 PF00149 Calcineurin-like phosphoesterase CCR98_RS04405 PF01569 PAP2 superfamily CCR98_RS04410 PF13439 Glycosyltransferase Family 4 CCR98_RS04410 PF00534 Glycosyl transferases group 1 CCR98_RS04415 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS04415 PF00593 TonB dependent receptor CCR98_RS04420 PF02541 Ppx/GppA phosphatase family CCR98_RS04425 PF02503 Polyphosphate kinase middle domain CCR98_RS04425 PF17941 Polyphosphate kinase C-terminal domain 1 CCR98_RS04425 PF13089 Polyphosphate kinase N-terminal domain CCR98_RS04425 PF13090 Polyphosphate kinase C-terminal domain 2 CCR98_RS04430 PF11808 Phosphate regulon sensor protein PhoR CCR98_RS04430 PF00989 PAS fold CCR98_RS04430 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS04435 PF00072 Response regulator receiver domain CCR98_RS04435 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS04440 PF01435 Peptidase family M48 CCR98_RS04440 PF07720 Tetratricopeptide repeat CCR98_RS04445 PF00462 Glutaredoxin CCR98_RS04455 PF00180 Isocitrate/isopropylmalate dehydrogenase CCR98_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS04465 PF03466 LysR substrate binding domain CCR98_RS04520 PF05697 Bacterial trigger factor protein (TF) CCR98_RS04520 PF05698 Bacterial trigger factor protein (TF) C-terminus CCR98_RS04525 PF00574 Clp protease CCR98_RS04530 PF07724 AAA domain (Cdc48 subfamily) CCR98_RS04530 PF10431 C-terminal, D2-small domain, of ClpB protein CCR98_RS04530 PF06689 ClpX C4-type zinc finger CCR98_RS04535 PF02190 ATP-dependent protease La (LON) substrate-binding domain CCR98_RS04535 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS04535 PF05362 Lon protease (S16) C-terminal proteolytic domain CCR98_RS04540 PF00216 Bacterial DNA-binding protein CCR98_RS04570 PF05698 Bacterial trigger factor protein (TF) C-terminus CCR98_RS04580 PF01476 LysM domain CCR98_RS04580 PF05257 CHAP domain CCR98_RS04585 PF16123 Hydroxyacylglutathione hydrolase C-terminus CCR98_RS04585 PF00753 Metallo-beta-lactamase superfamily CCR98_RS04590 PF08241 Methyltransferase domain CCR98_RS04595 PF00075 RNase H CCR98_RS04600 PF00929 Exonuclease CCR98_RS04620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCR98_RS04630 PF12706 Beta-lactamase superfamily domain CCR98_RS04645 PF00893 Small Multidrug Resistance protein CCR98_RS04680 PF00437 Type II/IV secretion system protein CCR98_RS04685 PF03958 Bacterial type II/III secretion system short domain CCR98_RS04685 PF00263 Bacterial type II and III secretion system protein CCR98_RS04725 PF00691 OmpA family CCR98_RS04725 PF05736 OprF membrane domain CCR98_RS04740 PF12170 DNA polymerase III tau subunit V interacting with alpha CCR98_RS04740 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CCR98_RS04740 PF12169 DNA polymerase III subunits gamma and tau domain III CCR98_RS04745 PF02575 YbaB/EbfC DNA-binding family CCR98_RS04750 PF02132 RecR protein CCR98_RS04750 PF13662 Toprim domain CCR98_RS04755 PF01230 HIT domain CCR98_RS04765 PF13559 Domain of unknown function (DUF4129) CCR98_RS04765 PF11992 Domain of unknown function (DUF3488) CCR98_RS04765 PF01841 Transglutaminase-like superfamily CCR98_RS04775 PF17863 AAA lid domain CCR98_RS04775 PF07726 ATPase family associated with various cellular activities (AAA) CCR98_RS04785 PF02545 Maf-like protein CCR98_RS04790 PF02620 Large ribosomal RNA subunit accumulation protein YceD CCR98_RS04795 PF01783 Ribosomal L32p protein family CCR98_RS04800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCR98_RS04800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCR98_RS04810 PF00698 Acyl transferase domain CCR98_RS04820 PF00550 Phosphopantetheine attachment site CCR98_RS04825 PF02801 Beta-ketoacyl synthase, C-terminal domain CCR98_RS04825 PF00109 Beta-ketoacyl synthase, N-terminal domain CCR98_RS04830 PF04715 Anthranilate synthase component I, N terminal region CCR98_RS04830 PF00425 chorismate binding enzyme CCR98_RS04835 PF02618 YceG-like family CCR98_RS04840 PF02223 Thymidylate kinase CCR98_RS04845 PF09115 DNA polymerase III, delta subunit, C terminal CCR98_RS04925 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS04925 PF00593 TonB dependent receptor CCR98_RS04940 PF07690 Major Facilitator Superfamily CCR98_RS04945 PF08220 DeoR-like helix-turn-helix domain CCR98_RS04945 PF00455 DeoR C terminal sensor domain CCR98_RS04950 PF13599 Pentapeptide repeats (9 copies) CCR98_RS04955 PF13649 Methyltransferase domain CCR98_RS04960 PF00155 Aminotransferase class I and II CCR98_RS04960 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS04965 PF00892 EamA-like transporter family CCR98_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS04975 PF03466 LysR substrate binding domain CCR98_RS04995 PF07690 Major Facilitator Superfamily CCR98_RS05000 PF09278 MerR, DNA binding CCR98_RS05000 PF00376 MerR family regulatory protein CCR98_RS05010 PF03466 LysR substrate binding domain CCR98_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS05015 PF14748 Pyrroline-5-carboxylate reductase dimerisation CCR98_RS05015 PF03807 NADP oxidoreductase coenzyme F420-dependent CCR98_RS05020 PF01168 Alanine racemase, N-terminal domain CCR98_RS05025 PF00437 Type II/IV secretion system protein CCR98_RS05030 PF00437 Type II/IV secretion system protein CCR98_RS05035 PF00248 Aldo/keto reductase family CCR98_RS05040 PF03466 LysR substrate binding domain CCR98_RS05040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS05050 PF00583 Acetyltransferase (GNAT) family CCR98_RS05060 PF00958 GMP synthase C terminal domain CCR98_RS05060 PF00117 Glutamine amidotransferase class-I CCR98_RS05060 PF13673 Acetyltransferase (GNAT) domain CCR98_RS05060 PF13302 Acetyltransferase (GNAT) domain CCR98_RS05060 PF03352 Methyladenine glycosylase CCR98_RS05065 PF13687 Domain of unknown function (DUF4153) CCR98_RS05070 PF02622 Uncharacterized ACR, COG1678 CCR98_RS05075 PF03652 Holliday junction resolvase CCR98_RS05080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCR98_RS05080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCR98_RS05100 PF03448 MgtE intracellular N domain CCR98_RS05100 PF01769 Divalent cation transporter CCR98_RS05100 PF00571 CBS domain CCR98_RS05105 PF00391 PEP-utilising enzyme, mobile domain CCR98_RS05105 PF05524 PEP-utilising enzyme, N-terminal CCR98_RS05105 PF02896 PEP-utilising enzyme, TIM barrel domain CCR98_RS05110 PF00381 PTS HPr component phosphorylation site CCR98_RS05120 PF03668 P-loop ATPase protein family CCR98_RS05125 PF07475 HPr Serine kinase C-terminal domain CCR98_RS05125 PF02603 HPr Serine kinase N terminus CCR98_RS05130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCR98_RS05135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CCR98_RS05140 PF04552 Sigma-54, DNA binding domain CCR98_RS05140 PF00309 Sigma-54 factor, Activator interacting domain (AID) CCR98_RS05140 PF04963 Sigma-54 factor, core binding domain CCR98_RS05145 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCR98_RS05145 PF00005 ABC transporter CCR98_RS05165 PF00571 CBS domain CCR98_RS05165 PF01380 SIS domain CCR98_RS05175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCR98_RS05195 PF00551 Formyl transferase CCR98_RS05215 PF00586 AIR synthase related protein, N-terminal domain CCR98_RS05215 PF02769 AIR synthase related protein, C-terminal domain CCR98_RS05225 PF01594 AI-2E family transporter CCR98_RS05230 PF00308 Bacterial dnaA protein CCR98_RS05235 PF00483 Nucleotidyl transferase CCR98_RS05240 PF01636 Phosphotransferase enzyme family CCR98_RS05245 PF04226 Transglycosylase associated protein CCR98_RS05275 PF00175 Oxidoreductase NAD-binding domain CCR98_RS05275 PF00667 FAD binding domain CCR98_RS05275 PF00258 Flavodoxin CCR98_RS05280 PF02424 ApbE family CCR98_RS05305 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS05305 PF00593 TonB dependent receptor CCR98_RS05315 PF13640 2OG-Fe(II) oxygenase superfamily CCR98_RS05315 PF18331 PKHD-type hydroxylase C-terminal domain CCR98_RS05325 PF00593 TonB dependent receptor CCR98_RS05325 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS05335 PF00355 Rieske [2Fe-2S] domain CCR98_RS05350 PF00266 Aminotransferase class-V CCR98_RS05355 PF01458 Uncharacterized protein family (UPF0051) CCR98_RS05360 PF00005 ABC transporter CCR98_RS05365 PF01458 Uncharacterized protein family (UPF0051) CCR98_RS05370 PF02082 Transcriptional regulator CCR98_RS05380 PF01965 DJ-1/PfpI family CCR98_RS05405 PF02566 OsmC-like protein CCR98_RS05410 PF02567 Phenazine biosynthesis-like protein CCR98_RS05415 PF02567 Phenazine biosynthesis-like protein CCR98_RS05420 PF00696 Amino acid kinase family CCR98_RS05420 PF01842 ACT domain CCR98_RS05430 PF08245 Mur ligase middle domain CCR98_RS05430 PF02875 Mur ligase family, glutamate ligase domain CCR98_RS05450 PF00348 Polyprenyl synthetase CCR98_RS05455 PF00128 Alpha amylase, catalytic domain CCR98_RS05465 PF10566 Glycoside hydrolase 97 CCR98_RS05465 PF14508 Glycosyl-hydrolase 97 N-terminal CCR98_RS05465 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CCR98_RS05475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCR98_RS05480 PF00128 Alpha amylase, catalytic domain CCR98_RS05480 PF00686 Starch binding domain CCR98_RS05505 PF13732 Domain of unknown function (DUF4162) CCR98_RS05505 PF00005 ABC transporter CCR98_RS05510 PF06745 KaiC CCR98_RS05515 PF08448 PAS fold CCR98_RS05515 PF00072 Response regulator receiver domain CCR98_RS05515 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS05515 PF13188 PAS domain CCR98_RS05520 PF00356 Bacterial regulatory proteins, lacI family CCR98_RS05525 PF00436 Single-strand binding protein family CCR98_RS05535 PF05199 GMC oxidoreductase CCR98_RS05535 PF00732 GMC oxidoreductase CCR98_RS05550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCR98_RS05560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCR98_RS05560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCR98_RS05565 PF03825 Nucleoside H+ symporter CCR98_RS05575 PF00356 Bacterial regulatory proteins, lacI family CCR98_RS05580 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS05580 PF00072 Response regulator receiver domain CCR98_RS05590 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS05625 PF13443 Cro/C1-type HTH DNA-binding domain CCR98_RS05630 PF03741 Integral membrane protein TerC family CCR98_RS05630 PF00571 CBS domain CCR98_RS05630 PF03471 Transporter associated domain CCR98_RS05635 PF00149 Calcineurin-like phosphoesterase CCR98_RS05645 PF01794 Ferric reductase like transmembrane component CCR98_RS05655 PF05114 Protein of unknown function (DUF692) CCR98_RS05665 PF07681 DoxX CCR98_RS05675 PF02683 Cytochrome C biogenesis protein transmembrane region CCR98_RS05675 PF00578 AhpC/TSA family CCR98_RS05675 PF17991 Thioredoxin like C-terminal domain CCR98_RS05680 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS05680 PF00072 Response regulator receiver domain CCR98_RS05685 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS05685 PF00672 HAMP domain CCR98_RS05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS05695 PF08946 Osmosensory transporter coiled coil CCR98_RS05695 PF00083 Sugar (and other) transporter CCR98_RS05700 PF01156 Inosine-uridine preferring nucleoside hydrolase CCR98_RS05710 PF07729 FCD domain CCR98_RS05710 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS05720 PF00698 Acyl transferase domain CCR98_RS05725 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CCR98_RS05730 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CCR98_RS05740 PF01039 Carboxyl transferase domain CCR98_RS05745 PF06857 Malonate decarboxylase delta subunit (MdcD) CCR98_RS05750 PF16957 Malonate decarboxylase, alpha subunit, transporter CCR98_RS05755 PF00593 TonB dependent receptor CCR98_RS05755 PF07660 Secretin and TonB N terminus short domain CCR98_RS05755 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS05760 PF06039 Malate:quinone oxidoreductase (Mqo) CCR98_RS05765 PF13673 Acetyltransferase (GNAT) domain CCR98_RS05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS05775 PF03466 LysR substrate binding domain CCR98_RS05780 PF01810 LysE type translocator CCR98_RS05790 PF00854 POT family CCR98_RS05800 PF03169 OPT oligopeptide transporter protein CCR98_RS05805 PF00326 Prolyl oligopeptidase family CCR98_RS05805 PF07676 WD40-like Beta Propeller Repeat CCR98_RS05805 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CCR98_RS05820 PF03776 Septum formation topological specificity factor MinE CCR98_RS05825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCR98_RS05830 PF03775 Septum formation inhibitor MinC, C-terminal domain CCR98_RS05830 PF05209 Septum formation inhibitor MinC, N-terminal domain CCR98_RS05840 PF07730 Histidine kinase CCR98_RS05845 PF00072 Response regulator receiver domain CCR98_RS05845 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS05885 PF01370 NAD dependent epimerase/dehydratase family CCR98_RS05885 PF02222 ATP-grasp domain CCR98_RS05895 PF04377 Arginine-tRNA-protein transferase, C terminus CCR98_RS05895 PF04376 Arginine-tRNA-protein transferase, N terminus CCR98_RS05905 PF08281 Sigma-70, region 4 CCR98_RS05905 PF04542 Sigma-70 region 2 CCR98_RS05920 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS05940 PF17760 UvrA interaction domain CCR98_RS05940 PF00005 ABC transporter CCR98_RS05940 PF17755 UvrA DNA-binding domain CCR98_RS05945 PF00829 Ribosomal prokaryotic L21 protein CCR98_RS05950 PF01016 Ribosomal L27 protein CCR98_RS05955 PF01018 GTP1/OBG CCR98_RS05955 PF01926 50S ribosome-binding GTPase CCR98_RS05960 PF01649 Ribosomal protein S20 CCR98_RS05965 PF03023 Lipid II flippase MurJ CCR98_RS05970 PF01687 Riboflavin kinase CCR98_RS05970 PF06574 FAD synthetase CCR98_RS05975 PF06827 Zinc finger found in FPG and IleRS CCR98_RS05975 PF00133 tRNA synthetases class I (I, L, M and V) CCR98_RS05975 PF08264 Anticodon-binding domain of tRNA CCR98_RS05980 PF01252 Signal peptidase (SPase) II CCR98_RS05985 PF02401 LytB protein CCR98_RS05995 PF07947 YhhN family CCR98_RS06010 PF00593 TonB dependent receptor CCR98_RS06010 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS06030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCR98_RS06030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCR98_RS06050 PF06481 COX Aromatic Rich Motif CCR98_RS06050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCR98_RS06055 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCR98_RS06060 PF00510 Cytochrome c oxidase subunit III CCR98_RS06065 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CCR98_RS06070 PF03707 Bacterial signalling protein N terminal repeat CCR98_RS06070 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06070 PF00563 EAL domain CCR98_RS06075 PF18073 Rubredoxin metal binding domain CCR98_RS06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS06080 PF00183 Hsp90 protein CCR98_RS06100 PF02978 Signal peptide binding domain CCR98_RS06100 PF02881 SRP54-type protein, helical bundle domain CCR98_RS06100 PF00448 SRP54-type protein, GTPase domain CCR98_RS06105 PF03060 Nitronate monooxygenase CCR98_RS06120 PF00886 Ribosomal protein S16 CCR98_RS06125 PF01782 RimM N-terminal domain CCR98_RS06125 PF05239 PRC-barrel domain CCR98_RS06130 PF01746 tRNA (Guanine-1)-methyltransferase CCR98_RS06135 PF01245 Ribosomal protein L19 CCR98_RS06155 PF01554 MatE CCR98_RS06165 PF01479 S4 domain CCR98_RS06175 PF06628 Catalase-related immune-responsive CCR98_RS06175 PF00199 Catalase CCR98_RS06180 PF01624 MutS domain I CCR98_RS06180 PF05188 MutS domain II CCR98_RS06180 PF05190 MutS family domain IV CCR98_RS06180 PF05192 MutS domain III CCR98_RS06180 PF00488 MutS domain V CCR98_RS06190 PF08479 POTRA domain, ShlB-type CCR98_RS06190 PF17287 POTRA domain CCR98_RS06190 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CCR98_RS06195 PF04829 Pre-toxin domain with VENN motif CCR98_RS06195 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS06195 PF13332 Hemagglutinin repeat CCR98_RS06195 PF05860 haemagglutination activity domain CCR98_RS06205 PF04829 Pre-toxin domain with VENN motif CCR98_RS06205 PF13332 Hemagglutinin repeat CCR98_RS06205 PF05594 Haemagluttinin repeat CCR98_RS06215 PF05860 haemagglutination activity domain CCR98_RS06215 PF04829 Pre-toxin domain with VENN motif CCR98_RS06215 PF13332 Hemagglutinin repeat CCR98_RS06240 PF00672 HAMP domain CCR98_RS06240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS06245 PF05433 Glycine zipper 2TM domain CCR98_RS06260 PF13533 Biotin-lipoyl like CCR98_RS06270 PF03466 LysR substrate binding domain CCR98_RS06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS06275 PF01810 LysE type translocator CCR98_RS06280 PF00557 Metallopeptidase family M24 CCR98_RS06305 PF00202 Aminotransferase class-III CCR98_RS06315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCR98_RS06320 PF00892 EamA-like transporter family CCR98_RS06325 PF00892 EamA-like transporter family CCR98_RS06330 PF12146 Serine aminopeptidase, S33 CCR98_RS06335 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS06335 PF08521 Two-component sensor kinase N-terminal CCR98_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS06340 PF00072 Response regulator receiver domain CCR98_RS06340 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS06350 PF01638 HxlR-like helix-turn-helix CCR98_RS06355 PF07690 Major Facilitator Superfamily CCR98_RS06360 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06365 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS06365 PF00593 TonB dependent receptor CCR98_RS06370 PF01545 Cation efflux family CCR98_RS06375 PF04493 Endonuclease V CCR98_RS06380 PF00300 Histidine phosphatase superfamily (branch 1) CCR98_RS06390 PF05649 Peptidase family M13 CCR98_RS06390 PF01431 Peptidase family M13 CCR98_RS06395 PF00072 Response regulator receiver domain CCR98_RS06395 PF01966 HD domain CCR98_RS06400 PF03461 TRCF domain CCR98_RS06400 PF00270 DEAD/DEAH box helicase CCR98_RS06400 PF17757 UvrB interaction domain CCR98_RS06400 PF02559 CarD-like/TRCF domain CCR98_RS06400 PF00271 Helicase conserved C-terminal domain CCR98_RS06410 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CCR98_RS06415 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS06415 PF00072 Response regulator receiver domain CCR98_RS06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS06420 PF00672 HAMP domain CCR98_RS06420 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS06425 PF06123 Inner membrane protein CreD CCR98_RS06435 PF04389 Peptidase family M28 CCR98_RS06435 PF02225 PA domain CCR98_RS06440 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCR98_RS06445 PF01475 Ferric uptake regulator family CCR98_RS06450 PF13533 Biotin-lipoyl like CCR98_RS06465 PF00593 TonB dependent receptor CCR98_RS06465 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS06485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCR98_RS06485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CCR98_RS06490 PF06029 AlkA N-terminal domain CCR98_RS06490 PF02805 Metal binding domain of Ada CCR98_RS06490 PF12833 Helix-turn-helix domain CCR98_RS06490 PF00730 HhH-GPD superfamily base excision DNA repair protein CCR98_RS06510 PF01494 FAD binding domain CCR98_RS06520 PF03880 DbpA RNA binding domain CCR98_RS06520 PF00271 Helicase conserved C-terminal domain CCR98_RS06520 PF00270 DEAD/DEAH box helicase CCR98_RS06525 PF00563 EAL domain CCR98_RS06525 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06525 PF08448 PAS fold CCR98_RS06530 PF00072 Response regulator receiver domain CCR98_RS06530 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06535 PF00849 RNA pseudouridylate synthase CCR98_RS06535 PF01479 S4 domain CCR98_RS06540 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06545 PF02463 RecF/RecN/SMC N terminal domain CCR98_RS06570 PF00144 Beta-lactamase CCR98_RS06575 PF00664 ABC transporter transmembrane region CCR98_RS06575 PF00005 ABC transporter CCR98_RS06580 PF00328 Histidine phosphatase superfamily (branch 2) CCR98_RS06610 PF03466 LysR substrate binding domain CCR98_RS06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS06620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCR98_RS06625 PF03551 Transcriptional regulator PadR-like family CCR98_RS06645 PF03653 Uncharacterised protein family (UPF0093) CCR98_RS06650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCR98_RS06660 PF01336 OB-fold nucleic acid binding domain CCR98_RS06660 PF02811 PHP domain CCR98_RS06660 PF14579 Helix-hairpin-helix motif CCR98_RS06660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CCR98_RS06660 PF07733 Bacterial DNA polymerase III alpha NTPase domain CCR98_RS06665 PF01351 Ribonuclease HII CCR98_RS06670 PF02684 Lipid-A-disaccharide synthetase CCR98_RS06675 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CCR98_RS06675 PF00132 Bacterial transferase hexapeptide (six repeats) CCR98_RS06680 PF07977 FabA-like domain CCR98_RS06685 PF00132 Bacterial transferase hexapeptide (six repeats) CCR98_RS06685 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CCR98_RS06690 PF01103 Surface antigen CCR98_RS06690 PF07244 Surface antigen variable number repeat CCR98_RS06695 PF02163 Peptidase family M50 CCR98_RS06695 PF17820 PDZ domain CCR98_RS06700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CCR98_RS06700 PF13288 DXP reductoisomerase C-terminal domain CCR98_RS06700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CCR98_RS06710 PF01255 Putative undecaprenyl diphosphate synthase CCR98_RS06715 PF01765 Ribosome recycling factor CCR98_RS06720 PF00696 Amino acid kinase family CCR98_RS06725 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06730 PF00889 Elongation factor TS CCR98_RS06735 PF00318 Ribosomal protein S2 CCR98_RS06755 PF13953 PapC C-terminal domain CCR98_RS06755 PF13954 PapC N-terminal domain CCR98_RS06755 PF00577 Outer membrane usher protein CCR98_RS06770 PF00557 Metallopeptidase family M24 CCR98_RS06775 PF01966 HD domain CCR98_RS06775 PF01909 Nucleotidyltransferase domain CCR98_RS06775 PF08335 GlnD PII-uridylyltransferase CCR98_RS06780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CCR98_RS06780 PF00132 Bacterial transferase hexapeptide (six repeats) CCR98_RS06780 PF14602 Hexapeptide repeat of succinyl-transferase CCR98_RS06790 PF03960 ArsC family CCR98_RS06795 PF01546 Peptidase family M20/M25/M40 CCR98_RS06795 PF07687 Peptidase dimerisation domain CCR98_RS06805 PF13537 Glutamine amidotransferase domain CCR98_RS06805 PF00733 Asparagine synthase CCR98_RS06810 PF00999 Sodium/hydrogen exchanger family CCR98_RS06815 PF01804 Penicillin amidase CCR98_RS06820 PF00210 Ferritin-like domain CCR98_RS06825 PF03989 DNA gyrase C-terminal domain, beta-propeller CCR98_RS06825 PF00521 DNA gyrase/topoisomerase IV, subunit A CCR98_RS06830 PF12833 Helix-turn-helix domain CCR98_RS06840 PF02321 Outer membrane efflux protein CCR98_RS06845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS06845 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS06850 PF07690 Major Facilitator Superfamily CCR98_RS06860 PF03466 LysR substrate binding domain CCR98_RS06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS06880 PF00575 S1 RNA binding domain CCR98_RS06880 PF00773 RNB domain CCR98_RS06880 PF08206 Ribonuclease B OB domain CCR98_RS06880 PF17876 Cold shock domain CCR98_RS06880 PF08461 Ribonuclease R winged-helix domain CCR98_RS06890 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCR98_RS06890 PF00588 SpoU rRNA Methylase family CCR98_RS06895 PF02321 Outer membrane efflux protein CCR98_RS06900 PF02687 FtsX-like permease family CCR98_RS06900 PF00005 ABC transporter CCR98_RS06900 PF12704 MacB-like periplasmic core domain CCR98_RS06905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS06910 PF00072 Response regulator receiver domain CCR98_RS06910 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS06915 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS06915 PF00672 HAMP domain CCR98_RS06920 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS06925 PF00929 Exonuclease CCR98_RS06930 PF07681 DoxX CCR98_RS06940 PF05114 Protein of unknown function (DUF692) CCR98_RS06950 PF01895 PhoU domain CCR98_RS06955 PF00005 ABC transporter CCR98_RS06960 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS06970 PF12849 PBP superfamily domain CCR98_RS06975 PF12849 PBP superfamily domain CCR98_RS06985 PF00730 HhH-GPD superfamily base excision DNA repair protein CCR98_RS06985 PF00633 Helix-hairpin-helix motif CCR98_RS06985 PF10576 Iron-sulfur binding domain of endonuclease III CCR98_RS06995 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS07000 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CCR98_RS07000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCR98_RS07005 PF00293 NUDIX domain CCR98_RS07010 PF00581 Rhodanese-like domain CCR98_RS07025 PF10672 S-adenosylmethionine-dependent methyltransferase CCR98_RS07025 PF02926 THUMP domain CCR98_RS07025 PF01170 Putative RNA methylase family UPF0020 CCR98_RS07045 PF07660 Secretin and TonB N terminus short domain CCR98_RS07045 PF00593 TonB dependent receptor CCR98_RS07045 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS07050 PF04286 Protein of unknown function (DUF445) CCR98_RS07060 PF00202 Aminotransferase class-III CCR98_RS07065 PF00171 Aldehyde dehydrogenase family CCR98_RS07070 PF00083 Sugar (and other) transporter CCR98_RS07070 PF07690 Major Facilitator Superfamily CCR98_RS07075 PF01814 Hemerythrin HHE cation binding domain CCR98_RS07080 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS07080 PF00072 Response regulator receiver domain CCR98_RS07100 PF01266 FAD dependent oxidoreductase CCR98_RS07110 PF00120 Glutamine synthetase, catalytic domain CCR98_RS07115 PF13416 Bacterial extracellular solute-binding protein CCR98_RS07120 PF08402 TOBE domain CCR98_RS07120 PF00005 ABC transporter CCR98_RS07125 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS07135 PF00171 Aldehyde dehydrogenase family CCR98_RS07150 PF00571 CBS domain CCR98_RS07150 PF03471 Transporter associated domain CCR98_RS07165 PF02130 Uncharacterized protein family UPF0054 CCR98_RS07170 PF02562 PhoH-like protein CCR98_RS07180 PF00005 ABC transporter CCR98_RS07190 PF04055 Radical SAM superfamily CCR98_RS07190 PF01938 TRAM domain CCR98_RS07190 PF00919 Uncharacterized protein family UPF0004 CCR98_RS07195 PF13417 Glutathione S-transferase, N-terminal domain CCR98_RS07205 PF01464 Transglycosylase SLT domain CCR98_RS07210 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CCR98_RS07210 PF00355 Rieske [2Fe-2S] domain CCR98_RS07215 PF00033 Cytochrome b/b6/petB CCR98_RS07215 PF00032 Cytochrome b(C-terminal)/b6/petD CCR98_RS07220 PF02167 Cytochrome C1 family CCR98_RS07225 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS07225 PF00043 Glutathione S-transferase, C-terminal domain CCR98_RS07230 PF04386 Stringent starvation protein B CCR98_RS07245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CCR98_RS07245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CCR98_RS07255 PF00731 AIR carboxylase CCR98_RS07260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CCR98_RS07260 PF02222 ATP-grasp domain CCR98_RS07265 PF02627 Carboxymuconolactone decarboxylase family CCR98_RS07270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCR98_RS07270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCR98_RS07275 PF00462 Glutaredoxin CCR98_RS07285 PF00593 TonB dependent receptor CCR98_RS07290 PF11892 Domain of unknown function (DUF3412) CCR98_RS07290 PF03641 Possible lysine decarboxylase CCR98_RS07290 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CCR98_RS07315 PF05567 Neisseria PilC beta-propeller domain CCR98_RS07320 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CCR98_RS07320 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS07335 PF12344 Ultra-violet resistance protein B CCR98_RS07335 PF17757 UvrB interaction domain CCR98_RS07335 PF00271 Helicase conserved C-terminal domain CCR98_RS07335 PF02151 UvrB/uvrC motif CCR98_RS07335 PF04851 Type III restriction enzyme, res subunit CCR98_RS07360 PF06629 MltA-interacting protein MipA CCR98_RS07365 PF00072 Response regulator receiver domain CCR98_RS07365 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS07370 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS07375 PF00753 Metallo-beta-lactamase superfamily CCR98_RS07375 PF03772 Competence protein CCR98_RS07375 PF13567 Domain of unknown function (DUF4131) CCR98_RS07380 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS07390 PF00664 ABC transporter transmembrane region CCR98_RS07390 PF00005 ABC transporter CCR98_RS07395 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CCR98_RS07400 PF02348 Cytidylyltransferase CCR98_RS07405 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCR98_RS07415 PF02151 UvrB/uvrC motif CCR98_RS07415 PF08459 UvrC Helix-hairpin-helix N-terminal CCR98_RS07415 PF01541 GIY-YIG catalytic domain CCR98_RS07420 PF01066 CDP-alcohol phosphatidyltransferase CCR98_RS07440 PF02321 Outer membrane efflux protein CCR98_RS07450 PF02687 FtsX-like permease family CCR98_RS07450 PF00005 ABC transporter CCR98_RS07450 PF12704 MacB-like periplasmic core domain CCR98_RS07500 PF01613 Flavin reductase like domain CCR98_RS07540 PF02311 AraC-like ligand binding domain CCR98_RS07540 PF12833 Helix-turn-helix domain CCR98_RS07545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CCR98_RS07565 PF13746 4Fe-4S dicluster domain CCR98_RS07565 PF12801 4Fe-4S binding domain CCR98_RS07565 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CCR98_RS07580 PF04055 Radical SAM superfamily CCR98_RS07580 PF06969 HemN C-terminal domain CCR98_RS07585 PF00589 Phage integrase family CCR98_RS07625 PF00436 Single-strand binding protein family CCR98_RS07710 PF00772 DnaB-like helicase N terminal domain CCR98_RS07710 PF03796 DnaB-like helicase C terminal domain CCR98_RS07905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCR98_RS07905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCR98_RS07905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCR98_RS07910 PF01645 Conserved region in glutamate synthase CCR98_RS07915 PF13673 Acetyltransferase (GNAT) domain CCR98_RS07920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCR98_RS07920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS07925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCR98_RS07935 PF00581 Rhodanese-like domain CCR98_RS07935 PF17773 UPF0176 acylphosphatase like domain CCR98_RS07940 PF00296 Luciferase-like monooxygenase CCR98_RS07955 PF03471 Transporter associated domain CCR98_RS07955 PF00571 CBS domain CCR98_RS07955 PF01595 Cyclin M transmembrane N-terminal domain CCR98_RS07965 PF01384 Phosphate transporter family CCR98_RS07975 PF13302 Acetyltransferase (GNAT) domain CCR98_RS07980 PF00986 DNA gyrase B subunit, carboxyl terminus CCR98_RS07980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS07980 PF01751 Toprim domain CCR98_RS07980 PF00204 DNA gyrase B CCR98_RS07990 PF06418 CTP synthase N-terminus CCR98_RS07990 PF00117 Glutamine amidotransferase class-I CCR98_RS07995 PF00793 DAHP synthetase I family CCR98_RS08010 PF00113 Enolase, C-terminal TIM barrel domain CCR98_RS08010 PF03952 Enolase, N-terminal domain CCR98_RS08015 PF04977 Septum formation initiator CCR98_RS08020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CCR98_RS08025 PF02542 YgbB family CCR98_RS08030 PF01142 tRNA pseudouridine synthase D (TruD) CCR98_RS08035 PF01713 Smr domain CCR98_RS08040 PF01975 Survival protein SurE CCR98_RS08055 PF01551 Peptidase family M23 CCR98_RS08055 PF01476 LysM domain CCR98_RS08065 PF04430 Protein of unknown function (DUF498/DUF598) CCR98_RS08070 PF01985 CRS1 / YhbY (CRM) domain CCR98_RS08075 PF01728 FtsJ-like methyltransferase CCR98_RS08080 PF17862 AAA+ lid domain CCR98_RS08080 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS08080 PF06480 FtsH Extracellular CCR98_RS08080 PF01434 Peptidase family M41 CCR98_RS08090 PF00809 Pterin binding enzyme CCR98_RS08100 PF17209 Hfq protein CCR98_RS08105 PF16360 GTP-binding GTPase Middle Region CCR98_RS08105 PF13167 GTP-binding GTPase N-terminal CCR98_RS08105 PF01926 50S ribosome-binding GTPase CCR98_RS08110 PF02464 Competence-damaged protein CCR98_RS08115 PF03109 ABC1 family CCR98_RS08120 PF00717 Peptidase S24-like CCR98_RS08120 PF01726 LexA DNA binding domain CCR98_RS08125 PF00154 recA bacterial DNA recombination protein CCR98_RS08130 PF02631 RecX family CCR98_RS08135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCR98_RS08135 PF02272 DHHA1 domain CCR98_RS08135 PF01411 tRNA synthetases class II (A) CCR98_RS08140 PF02599 Global regulator protein family CCR98_RS08150 PF00593 TonB dependent receptor CCR98_RS08150 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS08150 PF04886 PT repeat CCR98_RS08160 PF17831 Pyruvate dehydrogenase E1 component middle domain CCR98_RS08160 PF00456 Transketolase, thiamine diphosphate binding domain CCR98_RS08180 PF09423 PhoD-like phosphatase CCR98_RS08180 PF16655 PhoD-like phosphatase, N-terminal domain CCR98_RS08185 PF05506 Domain of unknown function (DUF756) CCR98_RS08185 PF04185 Phosphoesterase family CCR98_RS08190 PF00593 TonB dependent receptor CCR98_RS08190 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS08195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCR98_RS08200 PF00034 Cytochrome c CCR98_RS08200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCR98_RS08210 PF07690 Major Facilitator Superfamily CCR98_RS08215 PF17954 Quercetinase C-terminal cupin domain CCR98_RS08215 PF02678 Pirin CCR98_RS08220 PF03466 LysR substrate binding domain CCR98_RS08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS08245 PF08543 Phosphomethylpyrimidine kinase CCR98_RS08245 PF02581 Thiamine monophosphate synthase CCR98_RS08260 PF13638 PIN domain CCR98_RS08260 PF02562 PhoH-like protein CCR98_RS08265 PF00578 AhpC/TSA family CCR98_RS08275 PF00701 Dihydrodipicolinate synthetase family CCR98_RS08285 PF00037 4Fe-4S binding domain CCR98_RS08285 PF11953 Domain of unknown function (DUF3470) CCR98_RS08290 PF00083 Sugar (and other) transporter CCR98_RS08300 PF12627 Probable RNA and SrmB- binding site of polymerase A CCR98_RS08300 PF12626 Polymerase A arginine-rich C-terminus CCR98_RS08300 PF01743 Poly A polymerase head domain CCR98_RS08305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CCR98_RS08310 PF02548 Ketopantoate hydroxymethyltransferase CCR98_RS08315 PF02569 Pantoate-beta-alanine ligase CCR98_RS08325 PF02261 Aspartate decarboxylase CCR98_RS08330 PF00342 Phosphoglucose isomerase CCR98_RS08335 PF00072 Response regulator receiver domain CCR98_RS08335 PF02954 Bacterial regulatory protein, Fis family CCR98_RS08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS08340 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS08345 PF04551 GcpE protein CCR98_RS08350 PF01569 PAP2 superfamily CCR98_RS08355 PF00072 Response regulator receiver domain CCR98_RS08355 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS08360 PF01081 KDPG and KHG aldolase CCR98_RS08365 PF00920 Dehydratase family CCR98_RS08370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CCR98_RS08375 PF02685 Glucokinase CCR98_RS08380 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CCR98_RS08380 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CCR98_RS08385 PF17912 MalK OB fold domain CCR98_RS08385 PF00005 ABC transporter CCR98_RS08400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CCR98_RS08405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CCR98_RS08410 PF02910 Fumarate reductase flavoprotein C-term CCR98_RS08410 PF00890 FAD binding domain CCR98_RS08415 PF13085 2Fe-2S iron-sulfur cluster binding domain CCR98_RS08415 PF13237 4Fe-4S dicluster domain CCR98_RS08420 PF03937 Flavinator of succinate dehydrogenase CCR98_RS08430 PF02687 FtsX-like permease family CCR98_RS08430 PF12704 MacB-like periplasmic core domain CCR98_RS08435 PF00005 ABC transporter CCR98_RS08445 PF04362 Bacterial Fe(2+) trafficking CCR98_RS08450 PF14815 NUDIX domain CCR98_RS08450 PF00730 HhH-GPD superfamily base excision DNA repair protein CCR98_RS08450 PF00633 Helix-hairpin-helix motif CCR98_RS08455 PF02881 SRP54-type protein, helical bundle domain CCR98_RS08455 PF00448 SRP54-type protein, GTPase domain CCR98_RS08465 PF00183 Hsp90 protein CCR98_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS08475 PF01467 Cytidylyltransferase-like CCR98_RS08485 PF00037 4Fe-4S binding domain CCR98_RS08495 PF00753 Metallo-beta-lactamase superfamily CCR98_RS08535 PF00719 Inorganic pyrophosphatase CCR98_RS08540 PF03441 FAD binding domain of DNA photolyase CCR98_RS08540 PF00875 DNA photolyase CCR98_RS08545 PF13488 Glycine zipper CCR98_RS08545 PF00691 OmpA family CCR98_RS08550 PF03466 LysR substrate binding domain CCR98_RS08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS08565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS08570 PF00873 AcrB/AcrD/AcrF family CCR98_RS08575 PF00106 short chain dehydrogenase CCR98_RS08580 PF02321 Outer membrane efflux protein CCR98_RS08615 PF00067 Cytochrome P450 CCR98_RS08655 PF13673 Acetyltransferase (GNAT) domain CCR98_RS08660 PF01668 SmpB protein CCR98_RS08665 PF03364 Polyketide cyclase / dehydrase and lipid transport CCR98_RS08670 PF03658 RnfH family Ubiquitin CCR98_RS08675 PF04355 SmpA / OmlA family CCR98_RS08680 PF01475 Ferric uptake regulator family CCR98_RS08690 PF03466 LysR substrate binding domain CCR98_RS08690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS08695 PF02463 RecF/RecN/SMC N terminal domain CCR98_RS08700 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CCR98_RS08700 PF01628 HrcA protein C terminal domain CCR98_RS08705 PF01025 GrpE CCR98_RS08710 PF00012 Hsp70 protein CCR98_RS08715 PF00684 DnaJ central domain CCR98_RS08715 PF01556 DnaJ C terminal domain CCR98_RS08715 PF00226 DnaJ domain CCR98_RS08720 PF02311 AraC-like ligand binding domain CCR98_RS08720 PF12833 Helix-turn-helix domain CCR98_RS08725 PF07690 Major Facilitator Superfamily CCR98_RS08730 PF08543 Phosphomethylpyrimidine kinase CCR98_RS08735 PF01817 Chorismate mutase type II CCR98_RS08735 PF02153 Prephenate dehydrogenase CCR98_RS08745 PF00664 ABC transporter transmembrane region CCR98_RS08745 PF00005 ABC transporter CCR98_RS08750 PF01205 Uncharacterized protein family UPF0029 CCR98_RS08760 PF04545 Sigma-70, region 4 CCR98_RS08760 PF04542 Sigma-70 region 2 CCR98_RS08765 PF08447 PAS fold CCR98_RS08765 PF08448 PAS fold CCR98_RS08765 PF00563 EAL domain CCR98_RS08765 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS08770 PF03641 Possible lysine decarboxylase CCR98_RS08775 PF00202 Aminotransferase class-III CCR98_RS08780 PF02547 Queuosine biosynthesis protein CCR98_RS08785 PF01702 Queuine tRNA-ribosyltransferase CCR98_RS08790 PF02699 Preprotein translocase subunit CCR98_RS08795 PF02355 Protein export membrane protein CCR98_RS08795 PF13721 SecD export protein N-terminal TM region CCR98_RS08795 PF07549 SecD/SecF GG Motif CCR98_RS08800 PF02355 Protein export membrane protein CCR98_RS08800 PF07549 SecD/SecF GG Motif CCR98_RS08805 PF12241 Trans-2-enoyl-CoA reductase catalytic region CCR98_RS08805 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CCR98_RS08805 PF07055 Enoyl reductase FAD binding domain CCR98_RS08810 PF00563 EAL domain CCR98_RS08810 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS08810 PF00072 Response regulator receiver domain CCR98_RS08820 PF07152 YaeQ protein CCR98_RS08825 PF00849 RNA pseudouridylate synthase CCR98_RS08830 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CCR98_RS08835 PF00313 'Cold-shock' DNA-binding domain CCR98_RS08840 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS08845 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CCR98_RS08855 PF00156 Phosphoribosyl transferase domain CCR98_RS08860 PF00271 Helicase conserved C-terminal domain CCR98_RS08860 PF03880 DbpA RNA binding domain CCR98_RS08860 PF00270 DEAD/DEAH box helicase CCR98_RS08865 PF03601 Conserved hypothetical protein 698 CCR98_RS08870 PF03466 LysR substrate binding domain CCR98_RS08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS08875 PF16326 ABC transporter C-terminal domain CCR98_RS08875 PF00005 ABC transporter CCR98_RS08875 PF12848 ABC transporter CCR98_RS08880 PF00034 Cytochrome c CCR98_RS08890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS08895 PF00873 AcrB/AcrD/AcrF family CCR98_RS08900 PF00873 AcrB/AcrD/AcrF family CCR98_RS08915 PF00795 Carbon-nitrogen hydrolase CCR98_RS08920 PF04371 Porphyromonas-type peptidyl-arginine deiminase CCR98_RS08930 PF00444 Ribosomal protein L36 CCR98_RS08935 PF02224 Cytidylate kinase CCR98_RS08940 PF00575 S1 RNA binding domain CCR98_RS08945 PF00216 Bacterial DNA-binding protein CCR98_RS08955 PF18073 Rubredoxin metal binding domain CCR98_RS08960 PF00953 Glycosyl transferase family 4 CCR98_RS08965 PF02719 Polysaccharide biosynthesis protein CCR98_RS08970 PF00483 Nucleotidyl transferase CCR98_RS08975 PF00108 Thiolase, N-terminal domain CCR98_RS08975 PF02803 Thiolase, C-terminal domain CCR98_RS08980 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS08980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCR98_RS08980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCR98_RS08990 PF00334 Nucleoside diphosphate kinase CCR98_RS08995 PF04055 Radical SAM superfamily CCR98_RS09005 PF13464 Domain of unknown function (DUF4115) CCR98_RS09010 PF09976 Tetratricopeptide repeat-like domain CCR98_RS09015 PF13360 PQQ-like domain CCR98_RS09015 PF01011 PQQ enzyme repeat CCR98_RS09020 PF01926 50S ribosome-binding GTPase CCR98_RS09020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CCR98_RS09040 PF00899 ThiF family CCR98_RS09045 PF00999 Sodium/hydrogen exchanger family CCR98_RS09045 PF02254 TrkA-N domain CCR98_RS09050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CCR98_RS09050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CCR98_RS09055 PF00571 CBS domain CCR98_RS09055 PF00478 IMP dehydrogenase / GMP reductase domain CCR98_RS09065 PF00958 GMP synthase C terminal domain CCR98_RS09065 PF00117 Glutamine amidotransferase class-I CCR98_RS09065 PF02540 NAD synthase CCR98_RS09090 PF03466 LysR substrate binding domain CCR98_RS09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS09130 PF00106 short chain dehydrogenase CCR98_RS09140 PF01022 Bacterial regulatory protein, arsR family CCR98_RS09160 PF01965 DJ-1/PfpI family CCR98_RS09170 PF03358 NADPH-dependent FMN reductase CCR98_RS09180 PF00296 Luciferase-like monooxygenase CCR98_RS09185 PF00296 Luciferase-like monooxygenase CCR98_RS09190 PF07687 Peptidase dimerisation domain CCR98_RS09190 PF01546 Peptidase family M20/M25/M40 CCR98_RS09195 PF00583 Acetyltransferase (GNAT) family CCR98_RS09200 PF00005 ABC transporter CCR98_RS09205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCR98_RS09225 PF12706 Beta-lactamase superfamily domain CCR98_RS09230 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS09230 PF08361 MAATS-type transcriptional repressor, C-terminal region CCR98_RS09235 PF00563 EAL domain CCR98_RS09235 PF12792 CSS motif domain associated with EAL CCR98_RS09240 PF00106 short chain dehydrogenase CCR98_RS09250 PF00581 Rhodanese-like domain CCR98_RS09260 PF01636 Phosphotransferase enzyme family CCR98_RS09265 PF17932 Tetracyclin repressor-like, C-terminal domain CCR98_RS09265 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS09280 PF00892 EamA-like transporter family CCR98_RS09285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CCR98_RS09285 PF01565 FAD binding domain CCR98_RS09290 PF01180 Dihydroorotate dehydrogenase CCR98_RS09310 PF00171 Aldehyde dehydrogenase family CCR98_RS09320 PF00701 Dihydrodipicolinate synthetase family CCR98_RS09340 PF00072 Response regulator receiver domain CCR98_RS09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS09345 PF13426 PAS domain CCR98_RS09345 PF00072 Response regulator receiver domain CCR98_RS09350 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS09350 PF01627 Hpt domain CCR98_RS09350 PF00672 HAMP domain CCR98_RS09350 PF00072 Response regulator receiver domain CCR98_RS09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS09350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CCR98_RS09355 PF03705 CheR methyltransferase, all-alpha domain CCR98_RS09355 PF01739 CheR methyltransferase, SAM binding domain CCR98_RS09360 PF01339 CheB methylesterase CCR98_RS09365 PF00072 Response regulator receiver domain CCR98_RS09365 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS09375 PF01022 Bacterial regulatory protein, arsR family CCR98_RS09410 PF03447 Homoserine dehydrogenase, NAD binding domain CCR98_RS09410 PF00696 Amino acid kinase family CCR98_RS09410 PF00742 Homoserine dehydrogenase CCR98_RS09410 PF01842 ACT domain CCR98_RS09410 PF13840 ACT domain CCR98_RS09415 PF00288 GHMP kinases N terminal domain CCR98_RS09415 PF08544 GHMP kinases C terminal CCR98_RS09420 PF14821 Threonine synthase N terminus CCR98_RS09420 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS09425 PF13545 Crp-like helix-turn-helix domain CCR98_RS09425 PF00027 Cyclic nucleotide-binding domain CCR98_RS09430 PF03129 Anticodon binding domain CCR98_RS09430 PF13393 Histidyl-tRNA synthetase CCR98_RS09445 PF01634 ATP phosphoribosyltransferase CCR98_RS09445 PF08029 HisG, C-terminal domain CCR98_RS09450 PF00815 Histidinol dehydrogenase CCR98_RS09455 PF00155 Aminotransferase class I and II CCR98_RS09460 PF00475 Imidazoleglycerol-phosphate dehydratase CCR98_RS09460 PF08645 Polynucleotide kinase 3 phosphatase CCR98_RS09465 PF00117 Glutamine amidotransferase class-I CCR98_RS09470 PF00977 Histidine biosynthesis protein CCR98_RS09475 PF00977 Histidine biosynthesis protein CCR98_RS09480 PF01502 Phosphoribosyl-AMP cyclohydrolase CCR98_RS09480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CCR98_RS09495 PF02685 Glucokinase CCR98_RS09500 PF01112 Asparaginase CCR98_RS09505 PF03932 CutC family CCR98_RS09510 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS09510 PF00593 TonB dependent receptor CCR98_RS09515 PF00403 Heavy-metal-associated domain CCR98_RS09520 PF00376 MerR family regulatory protein CCR98_RS09520 PF09278 MerR, DNA binding CCR98_RS09540 PF17678 Glycosyl hydrolase family 92 N-terminal domain CCR98_RS09540 PF07971 Glycosyl hydrolase family 92 CCR98_RS09545 PF00356 Bacterial regulatory proteins, lacI family CCR98_RS09550 PF07690 Major Facilitator Superfamily CCR98_RS09555 PF00294 pfkB family carbohydrate kinase CCR98_RS09575 PF03079 ARD/ARD' family CCR98_RS09580 PF00596 Class II Aldolase and Adducin N-terminal domain CCR98_RS09585 PF13520 Amino acid permease CCR98_RS09590 PF13520 Amino acid permease CCR98_RS09600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCR98_RS09600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCR98_RS09605 PF01565 FAD binding domain CCR98_RS09605 PF02913 FAD linked oxidases, C-terminal domain CCR98_RS09620 PF00672 HAMP domain CCR98_RS09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS09620 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS09625 PF00072 Response regulator receiver domain CCR98_RS09625 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS09630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS09630 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS09635 PF00873 AcrB/AcrD/AcrF family CCR98_RS09655 PF01132 Elongation factor P (EF-P) OB domain CCR98_RS09655 PF08207 Elongation factor P (EF-P) KOW-like domain CCR98_RS09655 PF09285 Elongation factor P, C-terminal CCR98_RS09660 PF00106 short chain dehydrogenase CCR98_RS09665 PF00682 HMGL-like CCR98_RS09675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCR98_RS09675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCR98_RS09675 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS09685 PF02421 Ferrous iron transport protein B CCR98_RS09685 PF07664 Ferrous iron transport protein B C terminus CCR98_RS09685 PF07670 Nucleoside recognition CCR98_RS09700 PF02525 Flavodoxin-like fold CCR98_RS09710 PF00106 short chain dehydrogenase CCR98_RS09715 PF01113 Dihydrodipicolinate reductase, N-terminus CCR98_RS09715 PF05173 Dihydrodipicolinate reductase, C-terminus CCR98_RS09720 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CCR98_RS09720 PF00117 Glutamine amidotransferase class-I CCR98_RS09725 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CCR98_RS09725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCR98_RS09725 PF02142 MGS-like domain CCR98_RS09730 PF01272 Transcription elongation factor, GreA/GreB, C-term CCR98_RS09730 PF03449 Transcription elongation factor, N-terminal CCR98_RS09740 PF02272 DHHA1 domain CCR98_RS09740 PF01368 DHH family CCR98_RS09740 PF17768 RecJ OB domain CCR98_RS09750 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CCR98_RS09775 PF00171 Aldehyde dehydrogenase family CCR98_RS09780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCR98_RS09780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCR98_RS09780 PF00205 Thiamine pyrophosphate enzyme, central domain CCR98_RS09785 PF01336 OB-fold nucleic acid binding domain CCR98_RS09785 PF00152 tRNA synthetases class II (D, K and N) CCR98_RS09790 PF00072 Response regulator receiver domain CCR98_RS09795 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS09795 PF01627 Hpt domain CCR98_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS09795 PF00072 Response regulator receiver domain CCR98_RS09800 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS09805 PF00501 AMP-binding enzyme CCR98_RS09805 PF13193 AMP-binding enzyme C-terminal domain CCR98_RS09810 PF05199 GMC oxidoreductase CCR98_RS09810 PF00732 GMC oxidoreductase CCR98_RS09815 PF00171 Aldehyde dehydrogenase family CCR98_RS09820 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS09820 PF13977 BetI-type transcriptional repressor, C-terminal CCR98_RS09825 PF02028 BCCT, betaine/carnitine/choline family transporter CCR98_RS09830 PF00330 Aconitase family (aconitate hydratase) CCR98_RS09830 PF00694 Aconitase C-terminal domain CCR98_RS09845 PF00330 Aconitase family (aconitate hydratase) CCR98_RS09845 PF11791 Aconitate B N-terminal domain CCR98_RS09845 PF06434 Aconitate hydratase 2 N-terminus CCR98_RS09860 PF08386 TAP-like protein CCR98_RS09860 PF00561 alpha/beta hydrolase fold CCR98_RS09865 PF00072 Response regulator receiver domain CCR98_RS09865 PF01339 CheB methylesterase CCR98_RS09870 PF03975 CheD chemotactic sensory transduction CCR98_RS09875 PF03705 CheR methyltransferase, all-alpha domain CCR98_RS09875 PF01739 CheR methyltransferase, SAM binding domain CCR98_RS09880 PF08269 Cache domain CCR98_RS09880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS09885 PF00672 HAMP domain CCR98_RS09885 PF02203 Tar ligand binding domain homologue CCR98_RS09895 PF01584 CheW-like domain CCR98_RS09900 PF07238 PilZ domain CCR98_RS09900 PF07317 Flagellar regulator YcgR CCR98_RS09905 PF00672 HAMP domain CCR98_RS09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS09905 PF02203 Tar ligand binding domain homologue CCR98_RS09910 PF01627 Hpt domain CCR98_RS09910 PF01584 CheW-like domain CCR98_RS09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS09910 PF02895 Signal transducing histidine kinase, homodimeric domain CCR98_RS09910 PF09078 CheY binding CCR98_RS09915 PF00072 Response regulator receiver domain CCR98_RS09925 PF01584 CheW-like domain CCR98_RS09930 PF13614 AAA domain CCR98_RS09935 PF13677 Membrane MotB of proton-channel complex MotA/MotB CCR98_RS09935 PF00691 OmpA family CCR98_RS09940 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS09945 PF00072 Response regulator receiver domain CCR98_RS09945 PF01584 CheW-like domain CCR98_RS09945 PF02895 Signal transducing histidine kinase, homodimeric domain CCR98_RS09945 PF01627 Hpt domain CCR98_RS09950 PF04344 Chemotaxis phosphatase, CheZ CCR98_RS09955 PF00072 Response regulator receiver domain CCR98_RS09960 PF04542 Sigma-70 region 2 CCR98_RS09960 PF04545 Sigma-70, region 4 CCR98_RS09960 PF04539 Sigma-70 region 3 CCR98_RS09965 PF10609 NUBPL iron-transfer P-loop NTPase CCR98_RS09970 PF00448 SRP54-type protein, GTPase domain CCR98_RS09975 PF00771 FHIPEP family CCR98_RS09980 PF01312 FlhB HrpN YscU SpaS Family CCR98_RS09985 PF00563 EAL domain CCR98_RS09985 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS09985 PF03707 Bacterial signalling protein N terminal repeat CCR98_RS09990 PF01311 Bacterial export proteins, family 1 CCR98_RS09995 PF01313 Bacterial export proteins, family 3 CCR98_RS10000 PF00813 FliP family CCR98_RS10005 PF04347 Flagellar biosynthesis protein, FliO CCR98_RS10010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CCR98_RS10015 PF02154 Flagellar motor switch protein FliM CCR98_RS10015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CCR98_RS10035 PF18269 T3SS EscN ATPase C-terminal domain CCR98_RS10035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCR98_RS10045 PF14842 FliG N-terminal domain CCR98_RS10045 PF14841 FliG middle domain CCR98_RS10045 PF01706 FliG C-terminal domain CCR98_RS10050 PF08345 Flagellar M-ring protein C-terminal CCR98_RS10050 PF01514 Secretory protein of YscJ/FliF family CCR98_RS10055 PF02049 Flagellar hook-basal body complex protein FliE CCR98_RS10065 PF00158 Sigma-54 interaction domain CCR98_RS10065 PF02954 Bacterial regulatory protein, Fis family CCR98_RS10065 PF06490 Flagellar regulatory protein FleQ CCR98_RS10070 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS10070 PF00072 Response regulator receiver domain CCR98_RS10075 PF04963 Sigma-54 factor, core binding domain CCR98_RS10075 PF00309 Sigma-54 factor, Activator interacting domain (AID) CCR98_RS10075 PF04552 Sigma-54, DNA binding domain CCR98_RS10080 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS10080 PF00072 Response regulator receiver domain CCR98_RS10095 PF02561 Flagellar protein FliS CCR98_RS10100 PF07195 Flagellar hook-associated protein 2 C-terminus CCR98_RS10100 PF02465 Flagellar hook-associated protein 2 N-terminus CCR98_RS10105 PF00669 Bacterial flagellin N-terminal helical region CCR98_RS10105 PF00700 Bacterial flagellin C-terminal helical region CCR98_RS10110 PF00669 Bacterial flagellin N-terminal helical region CCR98_RS10110 PF00700 Bacterial flagellin C-terminal helical region CCR98_RS10115 PF00700 Bacterial flagellin C-terminal helical region CCR98_RS10115 PF00669 Bacterial flagellin N-terminal helical region CCR98_RS10125 PF00460 Flagella basal body rod protein CCR98_RS10125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCR98_RS10130 PF10135 Rod binding protein CCR98_RS10130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CCR98_RS10135 PF02119 Flagellar P-ring protein CCR98_RS10140 PF02107 Flagellar L-ring protein CCR98_RS10145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCR98_RS10145 PF00460 Flagella basal body rod protein CCR98_RS10150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCR98_RS10150 PF00460 Flagella basal body rod protein CCR98_RS10155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCR98_RS10155 PF00460 Flagella basal body rod protein CCR98_RS10155 PF07559 Flagellar basal body protein FlaE CCR98_RS10165 PF00460 Flagella basal body rod protein CCR98_RS10165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCR98_RS10170 PF00460 Flagella basal body rod protein CCR98_RS10175 PF01584 CheW-like domain CCR98_RS10175 PF00072 Response regulator receiver domain CCR98_RS10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS10195 PF13426 PAS domain CCR98_RS10195 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS10195 PF00989 PAS fold CCR98_RS10195 PF13188 PAS domain CCR98_RS10200 PF03707 Bacterial signalling protein N terminal repeat CCR98_RS10200 PF00563 EAL domain CCR98_RS10200 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS10205 PF07730 Histidine kinase CCR98_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS10210 PF00563 EAL domain CCR98_RS10210 PF03707 Bacterial signalling protein N terminal repeat CCR98_RS10210 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS10230 PF12729 Four helix bundle sensory module for signal transduction CCR98_RS10230 PF00672 HAMP domain CCR98_RS10235 PF04356 Protein of unknown function (DUF489) CCR98_RS10245 PF00293 NUDIX domain CCR98_RS10255 PF02617 ATP-dependent Clp protease adaptor protein ClpS CCR98_RS10260 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CCR98_RS10265 PF10431 C-terminal, D2-small domain, of ClpB protein CCR98_RS10265 PF07724 AAA domain (Cdc48 subfamily) CCR98_RS10265 PF17871 AAA lid domain CCR98_RS10265 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS10265 PF02861 Clp amino terminal domain, pathogenicity island component CCR98_RS10275 PF01176 Translation initiation factor 1A / IF-1 CCR98_RS10280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CCR98_RS10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS10305 PF17854 FtsK alpha domain CCR98_RS10305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CCR98_RS10305 PF09397 Ftsk gamma domain CCR98_RS10305 PF01580 FtsK/SpoIIIE family CCR98_RS10315 PF03548 Outer membrane lipoprotein carrier protein LolA CCR98_RS10320 PF12002 MgsA AAA+ ATPase C terminal CCR98_RS10320 PF16193 AAA C-terminal domain CCR98_RS10320 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS10325 PF05656 Protein of unknown function (DUF805) CCR98_RS10335 PF00756 Putative esterase CCR98_RS10345 PF01497 Periplasmic binding protein CCR98_RS10350 PF01032 FecCD transport family CCR98_RS10355 PF00005 ABC transporter CCR98_RS10365 PF14492 Elongation Factor G, domain II CCR98_RS10365 PF00679 Elongation factor G C-terminus CCR98_RS10365 PF03144 Elongation factor Tu domain 2 CCR98_RS10365 PF03764 Elongation factor G, domain IV CCR98_RS10365 PF00009 Elongation factor Tu GTP binding domain CCR98_RS10380 PF09308 LuxQ, periplasmic CCR98_RS10380 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS10380 PF00072 Response regulator receiver domain CCR98_RS10385 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS10385 PF00072 Response regulator receiver domain CCR98_RS10420 PF01593 Flavin containing amine oxidoreductase CCR98_RS10435 PF08281 Sigma-70, region 4 CCR98_RS10435 PF04542 Sigma-70 region 2 CCR98_RS10450 PF13188 PAS domain CCR98_RS10450 PF08448 PAS fold CCR98_RS10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS10450 PF00072 Response regulator receiver domain CCR98_RS10450 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS10455 PF00072 Response regulator receiver domain CCR98_RS10460 PF00360 Phytochrome region CCR98_RS10460 PF08446 PAS fold CCR98_RS10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS10460 PF01590 GAF domain CCR98_RS10460 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS10470 PF03073 TspO/MBR family CCR98_RS10480 PF00583 Acetyltransferase (GNAT) family CCR98_RS10505 PF03960 ArsC family CCR98_RS10510 PF03358 NADPH-dependent FMN reductase CCR98_RS10525 PF01758 Sodium Bile acid symporter family CCR98_RS10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS10540 PF09278 MerR, DNA binding CCR98_RS10540 PF00376 MerR family regulatory protein CCR98_RS10545 PF02411 MerT mercuric transport protein CCR98_RS10550 PF00403 Heavy-metal-associated domain CCR98_RS10560 PF13700 Domain of unknown function (DUF4158) CCR98_RS10560 PF01526 Tn3 transposase DDE domain CCR98_RS10570 PF00376 MerR family regulatory protein CCR98_RS10570 PF09278 MerR, DNA binding CCR98_RS10575 PF02411 MerT mercuric transport protein CCR98_RS10580 PF00403 Heavy-metal-associated domain CCR98_RS10585 PF03203 MerC mercury resistance protein CCR98_RS10590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCR98_RS10590 PF00403 Heavy-metal-associated domain CCR98_RS10590 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS10595 PF00376 MerR family regulatory protein CCR98_RS10595 PF09278 MerR, DNA binding CCR98_RS10600 PF00394 Multicopper oxidase CCR98_RS10600 PF07731 Multicopper oxidase CCR98_RS10600 PF07732 Multicopper oxidase CCR98_RS10605 PF05275 Copper resistance protein B precursor (CopB) CCR98_RS10620 PF04945 YHS domain CCR98_RS10635 PF03239 Iron permease FTR1 family CCR98_RS10655 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS10655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS10660 PF00873 AcrB/AcrD/AcrF family CCR98_RS10670 PF00873 AcrB/AcrD/AcrF family CCR98_RS10675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS10675 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS10720 PF00589 Phage integrase family CCR98_RS10800 PF02625 XdhC and CoxI family CCR98_RS10800 PF13478 XdhC Rossmann domain CCR98_RS10805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCR98_RS10805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCR98_RS10810 PF00941 FAD binding domain in molybdopterin dehydrogenase CCR98_RS10810 PF03450 CO dehydrogenase flavoprotein C-terminal domain CCR98_RS10815 PF00111 2Fe-2S iron-sulfur cluster binding domain CCR98_RS10815 PF01799 [2Fe-2S] binding domain CCR98_RS10825 PF13426 PAS domain CCR98_RS10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS10825 PF00072 Response regulator receiver domain CCR98_RS10830 PF00072 Response regulator receiver domain CCR98_RS10830 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS10845 PF02566 OsmC-like protein CCR98_RS10855 PF03466 LysR substrate binding domain CCR98_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS10875 PF04542 Sigma-70 region 2 CCR98_RS10875 PF12680 SnoaL-like domain CCR98_RS10875 PF08281 Sigma-70, region 4 CCR98_RS10880 PF00753 Metallo-beta-lactamase superfamily CCR98_RS10880 PF16123 Hydroxyacylglutathione hydrolase C-terminus CCR98_RS10895 PF00561 alpha/beta hydrolase fold CCR98_RS10900 PF17755 UvrA DNA-binding domain CCR98_RS10920 PF05974 Domain of unknown function (DUF892) CCR98_RS10925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCR98_RS10925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCR98_RS10940 PF05974 Domain of unknown function (DUF892) CCR98_RS10955 PF00563 EAL domain CCR98_RS10955 PF04940 Sensors of blue-light using FAD CCR98_RS10965 PF00398 Ribosomal RNA adenine dimethylase CCR98_RS10985 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS10985 PF13823 Alcohol dehydrogenase GroES-associated CCR98_RS10985 PF00107 Zinc-binding dehydrogenase CCR98_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS11015 PF03466 LysR substrate binding domain CCR98_RS11020 PF07690 Major Facilitator Superfamily CCR98_RS11025 PF00248 Aldo/keto reductase family CCR98_RS11035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CCR98_RS11050 PF00144 Beta-lactamase CCR98_RS11055 PF02219 Methylenetetrahydrofolate reductase CCR98_RS11060 PF03466 LysR substrate binding domain CCR98_RS11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS11065 PF03358 NADPH-dependent FMN reductase CCR98_RS11075 PF01717 Cobalamin-independent synthase, Catalytic domain CCR98_RS11075 PF08267 Cobalamin-independent synthase, N-terminal domain CCR98_RS11135 PF13419 Haloacid dehalogenase-like hydrolase CCR98_RS11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS11155 PF03466 LysR substrate binding domain CCR98_RS11175 PF00158 Sigma-54 interaction domain CCR98_RS11175 PF00072 Response regulator receiver domain CCR98_RS11175 PF02954 Bacterial regulatory protein, Fis family CCR98_RS11255 PF01590 GAF domain CCR98_RS11255 PF00158 Sigma-54 interaction domain CCR98_RS11290 PF02245 Methylpurine-DNA glycosylase (MPG) CCR98_RS11295 PF08448 PAS fold CCR98_RS11295 PF08447 PAS fold CCR98_RS11295 PF05231 MASE1 CCR98_RS11295 PF00563 EAL domain CCR98_RS11295 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS11295 PF13426 PAS domain CCR98_RS11305 PF00005 ABC transporter CCR98_RS11305 PF02687 FtsX-like permease family CCR98_RS11305 PF12704 MacB-like periplasmic core domain CCR98_RS11310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS11315 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS11315 PF00072 Response regulator receiver domain CCR98_RS11320 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS11320 PF00672 HAMP domain CCR98_RS11330 PF06224 Winged helix DNA-binding domain CCR98_RS11340 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS11340 PF00593 TonB dependent receptor CCR98_RS11355 PF00561 alpha/beta hydrolase fold CCR98_RS11370 PF00690 Cation transporter/ATPase, N-terminus CCR98_RS11370 PF00689 Cation transporting ATPase, C-terminus CCR98_RS11375 PF02308 MgtC family CCR98_RS11380 PF13493 Domain of unknown function (DUF4118) CCR98_RS11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS11380 PF00989 PAS fold CCR98_RS11380 PF08447 PAS fold CCR98_RS11380 PF13426 PAS domain CCR98_RS11380 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS11385 PF00072 Response regulator receiver domain CCR98_RS11385 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS11395 PF06772 Bacterial low temperature requirement A protein (LtrA) CCR98_RS11420 PF00753 Metallo-beta-lactamase superfamily CCR98_RS11435 PF00384 Molybdopterin oxidoreductase CCR98_RS11440 PF02634 FdhD/NarQ family CCR98_RS11460 PF07690 Major Facilitator Superfamily CCR98_RS11485 PF00005 ABC transporter CCR98_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS11500 PF03466 LysR substrate binding domain CCR98_RS11505 PF00248 Aldo/keto reductase family CCR98_RS11515 PF05425 Copper resistance protein D CCR98_RS11520 PF00072 Response regulator receiver domain CCR98_RS11520 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS11525 PF00672 HAMP domain CCR98_RS11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS11525 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS11530 PF03466 LysR substrate binding domain CCR98_RS11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS11540 PF00873 AcrB/AcrD/AcrF family CCR98_RS11545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS11545 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS11555 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS11555 PF00072 Response regulator receiver domain CCR98_RS11560 PF08521 Two-component sensor kinase N-terminal CCR98_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS11560 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS11565 PF07971 Glycosyl hydrolase family 92 CCR98_RS11565 PF17678 Glycosyl hydrolase family 92 N-terminal domain CCR98_RS11590 PF08946 Osmosensory transporter coiled coil CCR98_RS11590 PF00083 Sugar (and other) transporter CCR98_RS11605 PF08447 PAS fold CCR98_RS11605 PF13426 PAS domain CCR98_RS11605 PF07536 HWE histidine kinase CCR98_RS11625 PF00593 TonB dependent receptor CCR98_RS11625 PF07660 Secretin and TonB N terminus short domain CCR98_RS11625 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS11640 PF00593 TonB dependent receptor CCR98_RS11640 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS11645 PF02514 CobN/Magnesium Chelatase CCR98_RS11645 PF11965 Domain of unknown function (DUF3479) CCR98_RS11660 PF03466 LysR substrate binding domain CCR98_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS11665 PF02678 Pirin CCR98_RS11665 PF05726 Pirin C-terminal cupin domain CCR98_RS11670 PF00857 Isochorismatase family CCR98_RS11675 PF00857 Isochorismatase family CCR98_RS11700 PF02472 Biopolymer transport protein ExbD/TolR CCR98_RS11705 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS11725 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS11725 PF12019 Type II transport protein GspH CCR98_RS11730 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS11730 PF02501 Type II secretion system (T2SS), protein I CCR98_RS11735 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS11735 PF11612 Type II secretion system (T2SS), protein J CCR98_RS11745 PF12849 PBP superfamily domain CCR98_RS11750 PF00482 Type II secretion system (T2SS), protein F CCR98_RS11755 PF00437 Type II/IV secretion system protein CCR98_RS11760 PF03958 Bacterial type II/III secretion system short domain CCR98_RS11760 PF00263 Bacterial type II and III secretion system protein CCR98_RS11780 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS11780 PF08334 Type II secretion system (T2SS), protein G CCR98_RS11810 PF01037 Lrp/AsnC ligand binding domain CCR98_RS11825 PF08447 PAS fold CCR98_RS11825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS11830 PF00667 FAD binding domain CCR98_RS11830 PF00258 Flavodoxin CCR98_RS11830 PF00175 Oxidoreductase NAD-binding domain CCR98_RS11835 PF00005 ABC transporter CCR98_RS11835 PF08402 TOBE domain CCR98_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS11850 PF00027 Cyclic nucleotide-binding domain CCR98_RS11850 PF13545 Crp-like helix-turn-helix domain CCR98_RS11855 PF04055 Radical SAM superfamily CCR98_RS11855 PF06969 HemN C-terminal domain CCR98_RS11860 PF07690 Major Facilitator Superfamily CCR98_RS11865 PF09312 SurA N-terminal domain CCR98_RS11865 PF00639 PPIC-type PPIASE domain CCR98_RS11870 PF02665 Nitrate reductase gamma subunit CCR98_RS11875 PF02613 Nitrate reductase delta subunit CCR98_RS11880 PF14711 Respiratory nitrate reductase beta C-terminal CCR98_RS11880 PF13247 4Fe-4S dicluster domain CCR98_RS11885 PF00384 Molybdopterin oxidoreductase CCR98_RS11885 PF14710 Respiratory nitrate reductase alpha N-terminal CCR98_RS11885 PF01568 Molydopterin dinucleotide binding domain CCR98_RS11890 PF07690 Major Facilitator Superfamily CCR98_RS11900 PF12804 MobA-like NTP transferase domain CCR98_RS11905 PF02391 MoaE protein CCR98_RS11915 PF03454 MoeA C-terminal region (domain IV) CCR98_RS11915 PF00994 Probable molybdopterin binding domain CCR98_RS11915 PF03453 MoeA N-terminal region (domain I and II) CCR98_RS11920 PF00994 Probable molybdopterin binding domain CCR98_RS11920 PF01967 MoaC family CCR98_RS11925 PF04055 Radical SAM superfamily CCR98_RS11925 PF06463 Molybdenum Cofactor Synthesis C CCR98_RS11990 PF00376 MerR family regulatory protein CCR98_RS11990 PF09278 MerR, DNA binding CCR98_RS11995 PF03358 NADPH-dependent FMN reductase CCR98_RS12005 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCR98_RS12010 PF01758 Sodium Bile acid symporter family CCR98_RS12015 PF00561 alpha/beta hydrolase fold CCR98_RS12055 PF01219 Prokaryotic diacylglycerol kinase CCR98_RS12075 PF00691 OmpA family CCR98_RS12075 PF04972 BON domain CCR98_RS12085 PF00106 short chain dehydrogenase CCR98_RS12090 PF00975 Thioesterase domain CCR98_RS12090 PF00550 Phosphopantetheine attachment site CCR98_RS12090 PF00668 Condensation domain CCR98_RS12090 PF00501 AMP-binding enzyme CCR98_RS12095 PF00857 Isochorismatase family CCR98_RS12095 PF00550 Phosphopantetheine attachment site CCR98_RS12100 PF00857 Isochorismatase family CCR98_RS12100 PF00550 Phosphopantetheine attachment site CCR98_RS12105 PF00501 AMP-binding enzyme CCR98_RS12105 PF13193 AMP-binding enzyme C-terminal domain CCR98_RS12110 PF00425 chorismate binding enzyme CCR98_RS12115 PF07690 Major Facilitator Superfamily CCR98_RS12120 PF03176 MMPL family CCR98_RS12120 PF12823 Domain of unknown function (DUF3817) CCR98_RS12125 PF00296 Luciferase-like monooxygenase CCR98_RS12140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCR98_RS12140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCR98_RS12145 PF01613 Flavin reductase like domain CCR98_RS12155 PF00487 Fatty acid desaturase CCR98_RS12160 PF00970 Oxidoreductase FAD-binding domain CCR98_RS12160 PF00175 Oxidoreductase NAD-binding domain CCR98_RS12160 PF00111 2Fe-2S iron-sulfur cluster binding domain CCR98_RS12165 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS12170 PF00593 TonB dependent receptor CCR98_RS12170 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS12180 PF02742 Iron dependent repressor, metal binding and dimerisation domain CCR98_RS12180 PF01325 Iron dependent repressor, N-terminal DNA binding domain CCR98_RS12185 PF01566 Natural resistance-associated macrophage protein CCR98_RS12200 PF00268 Ribonucleotide reductase, small chain CCR98_RS12205 PF00317 Ribonucleotide reductase, all-alpha domain CCR98_RS12205 PF02867 Ribonucleotide reductase, barrel domain CCR98_RS12205 PF03477 ATP cone domain CCR98_RS12210 PF00109 Beta-ketoacyl synthase, N-terminal domain CCR98_RS12210 PF14765 Polyketide synthase dehydratase CCR98_RS12210 PF00550 Phosphopantetheine attachment site CCR98_RS12210 PF00698 Acyl transferase domain CCR98_RS12210 PF02801 Beta-ketoacyl synthase, C-terminal domain CCR98_RS12210 PF16197 Ketoacyl-synthetase C-terminal extension CCR98_RS12210 PF08659 KR domain CCR98_RS12210 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS12210 PF00107 Zinc-binding dehydrogenase CCR98_RS12215 PF00593 TonB dependent receptor CCR98_RS12215 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS12220 PF02028 BCCT, betaine/carnitine/choline family transporter CCR98_RS12245 PF00893 Small Multidrug Resistance protein CCR98_RS12250 PF00893 Small Multidrug Resistance protein CCR98_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS12255 PF03466 LysR substrate binding domain CCR98_RS12265 PF07660 Secretin and TonB N terminus short domain CCR98_RS12265 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS12265 PF00593 TonB dependent receptor CCR98_RS12270 PF00654 Voltage gated chloride channel CCR98_RS12275 PF02308 MgtC family CCR98_RS12285 PF01209 ubiE/COQ5 methyltransferase family CCR98_RS12295 PF00691 OmpA family CCR98_RS12300 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS12300 PF03895 YadA-like membrane anchor domain CCR98_RS12300 PF05662 Coiled stalk of trimeric autotransporter adhesin CCR98_RS12300 PF05658 Head domain of trimeric autotransporter adhesin CCR98_RS12300 PF05662 Coiled stalk of trimeric autotransporter adhesin CCR98_RS12300 PF05658 Head domain of trimeric autotransporter adhesin CCR98_RS12300 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS12300 PF03895 YadA-like membrane anchor domain CCR98_RS12330 PF04972 BON domain CCR98_RS12330 PF00263 Bacterial type II and III secretion system protein CCR98_RS12330 PF13629 Pilus formation protein N terminal region CCR98_RS12340 PF00437 Type II/IV secretion system protein CCR98_RS12380 PF00561 alpha/beta hydrolase fold CCR98_RS12385 PF05977 Transmembrane secretion effector CCR98_RS12395 PF01979 Amidohydrolase family CCR98_RS12405 PF00857 Isochorismatase family CCR98_RS12410 PF12833 Helix-turn-helix domain CCR98_RS12410 PF10114 Sensory domain found in PocR CCR98_RS12420 PF07730 Histidine kinase CCR98_RS12420 PF00672 HAMP domain CCR98_RS12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS12420 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CCR98_RS12425 PF00072 Response regulator receiver domain CCR98_RS12425 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS12430 PF07690 Major Facilitator Superfamily CCR98_RS12435 PF03466 LysR substrate binding domain CCR98_RS12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS12440 PF01979 Amidohydrolase family CCR98_RS12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS12450 PF03466 LysR substrate binding domain CCR98_RS12460 PF01979 Amidohydrolase family CCR98_RS12470 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS12470 PF00593 TonB dependent receptor CCR98_RS12480 PF02611 CDP-diacylglycerol pyrophosphatase CCR98_RS12500 PF01565 FAD binding domain CCR98_RS12500 PF09330 D-lactate dehydrogenase, membrane binding CCR98_RS12505 PF01070 FMN-dependent dehydrogenase CCR98_RS12510 PF07729 FCD domain CCR98_RS12510 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS12515 PF02652 L-lactate permease CCR98_RS12520 PF02308 MgtC family CCR98_RS12530 PF12833 Helix-turn-helix domain CCR98_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS12550 PF03466 LysR substrate binding domain CCR98_RS12555 PF07691 PA14 domain CCR98_RS12555 PF14310 Fibronectin type III-like domain CCR98_RS12555 PF00933 Glycosyl hydrolase family 3 N terminal domain CCR98_RS12555 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCR98_RS12565 PF12833 Helix-turn-helix domain CCR98_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS12575 PF03466 LysR substrate binding domain CCR98_RS12600 PF14579 Helix-hairpin-helix motif CCR98_RS12600 PF01336 OB-fold nucleic acid binding domain CCR98_RS12600 PF02811 PHP domain CCR98_RS12600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CCR98_RS12600 PF07733 Bacterial DNA polymerase III alpha NTPase domain CCR98_RS12610 PF00155 Aminotransferase class I and II CCR98_RS12610 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS12615 PF01168 Alanine racemase, N-terminal domain CCR98_RS12635 PF04542 Sigma-70 region 2 CCR98_RS12635 PF08281 Sigma-70, region 4 CCR98_RS12645 PF00593 TonB dependent receptor CCR98_RS12645 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS12670 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CCR98_RS12670 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CCR98_RS12670 PF01276 Orn/Lys/Arg decarboxylase, major domain CCR98_RS12675 PF13520 Amino acid permease CCR98_RS12685 PF13098 Thioredoxin-like domain CCR98_RS12690 PF00578 AhpC/TSA family CCR98_RS12700 PF00376 MerR family regulatory protein CCR98_RS12700 PF09278 MerR, DNA binding CCR98_RS12760 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS12765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS12765 PF08447 PAS fold CCR98_RS12765 PF13426 PAS domain CCR98_RS12790 PF08447 PAS fold CCR98_RS12790 PF08448 PAS fold CCR98_RS12790 PF05231 MASE1 CCR98_RS12790 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS12790 PF00563 EAL domain CCR98_RS12790 PF13426 PAS domain CCR98_RS12795 PF09371 Tex-like protein N-terminal domain CCR98_RS12795 PF00575 S1 RNA binding domain CCR98_RS12795 PF17674 HHH domain CCR98_RS12795 PF16921 Tex protein YqgF-like domain CCR98_RS12815 PF17263 Family of unknown function (DUF5329) CCR98_RS12820 PF00561 alpha/beta hydrolase fold CCR98_RS12840 PF01554 MatE CCR98_RS12860 PF03618 Kinase/pyrophosphorylase CCR98_RS12865 PF00391 PEP-utilising enzyme, mobile domain CCR98_RS12865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CCR98_RS12865 PF02896 PEP-utilising enzyme, TIM barrel domain CCR98_RS12870 PF05552 Conserved TM helix CCR98_RS12870 PF00924 Mechanosensitive ion channel CCR98_RS12875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCR98_RS12885 PF00929 Exonuclease CCR98_RS12890 PF14437 MafB19-like deaminase CCR98_RS12895 PF01638 HxlR-like helix-turn-helix CCR98_RS12900 PF02525 Flavodoxin-like fold CCR98_RS12905 PF13673 Acetyltransferase (GNAT) domain CCR98_RS13000 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CCR98_RS13005 PF05101 Type IV secretory pathway, VirB3-like protein CCR98_RS13010 PF04956 TrbC/VIRB2 family CCR98_RS13015 PF01464 Transglycosylase SLT domain CCR98_RS13020 PF00437 Type II/IV secretion system protein CCR98_RS13025 PF03743 Bacterial conjugation TrbI-like protein CCR98_RS13035 PF04335 VirB8 protein CCR98_RS13045 PF02534 Type IV secretory system Conjugative DNA transfer CCR98_RS13055 PF07690 Major Facilitator Superfamily CCR98_RS13065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCR98_RS13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS13085 PF01494 FAD binding domain CCR98_RS13090 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS13090 PF17754 MftR C-terminal domain CCR98_RS13095 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS13095 PF00593 TonB dependent receptor CCR98_RS13115 PF01638 HxlR-like helix-turn-helix CCR98_RS13120 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS13120 PF00107 Zinc-binding dehydrogenase CCR98_RS13135 PF00580 UvrD/REP helicase N-terminal domain CCR98_RS13135 PF13361 UvrD-like helicase C-terminal domain CCR98_RS13135 PF12462 DNA helicase IV / RNA helicase N terminal CCR98_RS13150 PF03466 LysR substrate binding domain CCR98_RS13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS13155 PF02525 Flavodoxin-like fold CCR98_RS13165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCR98_RS13165 PF02403 Seryl-tRNA synthetase N-terminal domain CCR98_RS13170 PF03544 Gram-negative bacterial TonB protein C-terminal CCR98_RS13180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCR98_RS13185 PF01817 Chorismate mutase type II CCR98_RS13185 PF00800 Prephenate dehydratase CCR98_RS13185 PF01842 ACT domain CCR98_RS13190 PF00266 Aminotransferase class-V CCR98_RS13235 PF07969 Amidohydrolase family CCR98_RS13240 PF00221 Aromatic amino acid lyase CCR98_RS13250 PF17392 Urocanase C-terminal domain CCR98_RS13250 PF01175 Urocanase Rossmann-like domain CCR98_RS13250 PF17391 Urocanase N-terminal domain CCR98_RS13255 PF00144 Beta-lactamase CCR98_RS13280 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS13295 PF04371 Porphyromonas-type peptidyl-arginine deiminase CCR98_RS13300 PF03466 LysR substrate binding domain CCR98_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS13355 PF03466 LysR substrate binding domain CCR98_RS13360 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS13360 PF00107 Zinc-binding dehydrogenase CCR98_RS13375 PF13360 PQQ-like domain CCR98_RS13380 PF03989 DNA gyrase C-terminal domain, beta-propeller CCR98_RS13380 PF00521 DNA gyrase/topoisomerase IV, subunit A CCR98_RS13385 PF01008 Initiation factor 2 subunit family CCR98_RS13395 PF00152 tRNA synthetases class II (D, K and N) CCR98_RS13405 PF01653 NAD-dependent DNA ligase adenylation domain CCR98_RS13405 PF03120 NAD-dependent DNA ligase OB-fold domain CCR98_RS13405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CCR98_RS13405 PF12826 Helix-hairpin-helix motif CCR98_RS13405 PF00533 BRCA1 C Terminus (BRCT) domain CCR98_RS13410 PF00155 Aminotransferase class I and II CCR98_RS13415 PF04354 ZipA, C-terminal FtsZ-binding domain CCR98_RS13420 PF02463 RecF/RecN/SMC N terminal domain CCR98_RS13425 PF03948 Ribosomal protein L9, C-terminal domain CCR98_RS13425 PF01281 Ribosomal protein L9, N-terminal domain CCR98_RS13430 PF01084 Ribosomal protein S18 CCR98_RS13435 PF01250 Ribosomal protein S6 CCR98_RS13440 PF03691 Uncharacterised protein family (UPF0167) CCR98_RS13445 PF01521 Iron-sulphur cluster biosynthesis CCR98_RS13450 PF01336 OB-fold nucleic acid binding domain CCR98_RS13450 PF00152 tRNA synthetases class II (D, K and N) CCR98_RS13470 PF00484 Carbonic anhydrase CCR98_RS13475 PF06052 3-hydroxyanthranilic acid dioxygenase CCR98_RS13480 PF00266 Aminotransferase class-V CCR98_RS13485 PF01494 FAD binding domain CCR98_RS13490 PF08411 Exonuclease C-terminal CCR98_RS13490 PF00929 Exonuclease CCR98_RS13500 PF00248 Aldo/keto reductase family CCR98_RS13515 PF01513 ATP-NAD kinase CCR98_RS13530 PF05088 Bacterial NAD-glutamate dehydrogenase CCR98_RS13540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS13540 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS13545 PF00873 AcrB/AcrD/AcrF family CCR98_RS13560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS13560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCR98_RS13560 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS13565 PF03551 Transcriptional regulator PadR-like family CCR98_RS13565 PF13847 Methyltransferase domain CCR98_RS13570 PF02310 B12 binding domain CCR98_RS13570 PF00809 Pterin binding enzyme CCR98_RS13570 PF02607 B12 binding domain CCR98_RS13570 PF02965 Vitamin B12 dependent methionine synthase, activation domain CCR98_RS13570 PF02574 Homocysteine S-methyltransferase CCR98_RS13575 PF00809 Pterin binding enzyme CCR98_RS13575 PF02574 Homocysteine S-methyltransferase CCR98_RS13575 PF02607 B12 binding domain CCR98_RS13575 PF02310 B12 binding domain CCR98_RS13575 PF02965 Vitamin B12 dependent methionine synthase, activation domain CCR98_RS13590 PF04102 SlyX CCR98_RS13595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCR98_RS13595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCR98_RS13595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCR98_RS13600 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CCR98_RS13600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCR98_RS13605 PF00255 Glutathione peroxidase CCR98_RS13615 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS13620 PF00005 ABC transporter CCR98_RS13645 PF10415 Fumarase C C-terminus CCR98_RS13645 PF00206 Lyase CCR98_RS13650 PF00206 Lyase CCR98_RS13650 PF08328 Adenylosuccinate lyase C-terminal CCR98_RS13655 PF08007 Cupin superfamily protein CCR98_RS13665 PF16078 2-oxoglutarate dehydrogenase N-terminus CCR98_RS13665 PF02779 Transketolase, pyrimidine binding domain CCR98_RS13665 PF16870 2-oxoglutarate dehydrogenase C-terminal CCR98_RS13665 PF00676 Dehydrogenase E1 component CCR98_RS13670 PF00364 Biotin-requiring enzyme CCR98_RS13670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCR98_RS13670 PF02817 e3 binding domain CCR98_RS13675 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS13675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCR98_RS13690 PF16655 PhoD-like phosphatase, N-terminal domain CCR98_RS13690 PF09423 PhoD-like phosphatase CCR98_RS13700 PF00772 DnaB-like helicase N terminal domain CCR98_RS13700 PF03796 DnaB-like helicase C terminal domain CCR98_RS13705 PF03358 NADPH-dependent FMN reductase CCR98_RS13710 PF13537 Glutamine amidotransferase domain CCR98_RS13710 PF00733 Asparagine synthase CCR98_RS13715 PF02779 Transketolase, pyrimidine binding domain CCR98_RS13715 PF02780 Transketolase, C-terminal domain CCR98_RS13720 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS13740 PF01026 TatD related DNase CCR98_RS13745 PF00899 ThiF family CCR98_RS13750 PF01322 Cytochrome C' CCR98_RS13760 PF00313 'Cold-shock' DNA-binding domain CCR98_RS13770 PF02253 Phospholipase A1 CCR98_RS13775 PF03960 ArsC family CCR98_RS13780 PF00043 Glutathione S-transferase, C-terminal domain CCR98_RS13780 PF13417 Glutathione S-transferase, N-terminal domain CCR98_RS13790 PF05683 Fumarase C-terminus CCR98_RS13790 PF05681 Fumarate hydratase (Fumerase) CCR98_RS13795 PF08281 Sigma-70, region 4 CCR98_RS13795 PF04542 Sigma-70 region 2 CCR98_RS13795 PF12680 SnoaL-like domain CCR98_RS13800 PF02627 Carboxymuconolactone decarboxylase family CCR98_RS13805 PF00005 ABC transporter CCR98_RS13810 PF00175 Oxidoreductase NAD-binding domain CCR98_RS13810 PF00970 Oxidoreductase FAD-binding domain CCR98_RS13815 PF00255 Glutathione peroxidase CCR98_RS13820 PF01432 Peptidase family M3 CCR98_RS13845 PF01694 Rhomboid family CCR98_RS13850 PF00854 POT family CCR98_RS13860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCR98_RS13860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCR98_RS13865 PF00545 ribonuclease CCR98_RS13880 PF01106 NifU-like domain CCR98_RS13885 PF01329 Pterin 4 alpha carbinolamine dehydratase CCR98_RS13895 PF02535 ZIP Zinc transporter CCR98_RS13900 PF01479 S4 domain CCR98_RS13900 PF00849 RNA pseudouridylate synthase CCR98_RS13905 PF12111 Polyribonucleotide phosphorylase C terminal CCR98_RS13905 PF10150 Ribonuclease E/G family CCR98_RS13905 PF00575 S1 RNA binding domain CCR98_RS13920 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS13925 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS13930 PF01547 Bacterial extracellular solute-binding protein CCR98_RS13945 PF00356 Bacterial regulatory proteins, lacI family CCR98_RS13950 PF01722 BolA-like protein CCR98_RS13955 PF03795 YCII-related domain CCR98_RS13960 PF02616 Segregation and condensation protein ScpA CCR98_RS13965 PF04079 Segregation and condensation complex subunit ScpB CCR98_RS13970 PF01479 S4 domain CCR98_RS13970 PF00849 RNA pseudouridylate synthase CCR98_RS13975 PF12833 Helix-turn-helix domain CCR98_RS13975 PF14525 AraC-binding-like domain CCR98_RS13980 PF07690 Major Facilitator Superfamily CCR98_RS13995 PF00795 Carbon-nitrogen hydrolase CCR98_RS14000 PF00155 Aminotransferase class I and II CCR98_RS14005 PF00005 ABC transporter CCR98_RS14010 PF03379 CcmB protein CCR98_RS14015 PF01578 Cytochrome C assembly protein CCR98_RS14025 PF03100 CcmE CCR98_RS14030 PF01578 Cytochrome C assembly protein CCR98_RS14030 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CCR98_RS14035 PF08534 Redoxin CCR98_RS14040 PF03918 Cytochrome C biogenesis protein CCR98_RS14050 PF00561 alpha/beta hydrolase fold CCR98_RS14060 PF00005 ABC transporter CCR98_RS14060 PF00664 ABC transporter transmembrane region CCR98_RS14065 PF00005 ABC transporter CCR98_RS14065 PF00664 ABC transporter transmembrane region CCR98_RS14070 PF01654 Cytochrome bd terminal oxidase subunit I CCR98_RS14075 PF02322 Cytochrome bd terminal oxidase subunit II CCR98_RS14105 PF14883 Hypothetical glycosyl hydrolase family 13 CCR98_RS14105 PF01522 Polysaccharide deacetylase CCR98_RS14110 PF00535 Glycosyl transferase family 2 CCR98_RS14120 PF00171 Aldehyde dehydrogenase family CCR98_RS14125 PF01472 PUA domain CCR98_RS14125 PF00696 Amino acid kinase family CCR98_RS14135 PF00206 Lyase CCR98_RS14140 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCR98_RS14150 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase CCR98_RS14150 PF00696 Amino acid kinase family CCR98_RS14155 PF01546 Peptidase family M20/M25/M40 CCR98_RS14155 PF07687 Peptidase dimerisation domain CCR98_RS14160 PF00764 Arginosuccinate synthase CCR98_RS14165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCR98_RS14165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCR98_RS14175 PF01406 tRNA synthetases class I (C) catalytic domain CCR98_RS14175 PF09190 DALR domain CCR98_RS14180 PF02657 Fe-S metabolism associated domain CCR98_RS14190 PF01258 Prokaryotic dksA/traR C4-type zinc finger CCR98_RS14195 PF01809 Putative membrane protein insertion efficiency factor CCR98_RS14200 PF01979 Amidohydrolase family CCR98_RS14205 PF01551 Peptidase family M23 CCR98_RS14205 PF08460 Bacterial SH3 domain CCR98_RS14215 PF13419 Haloacid dehalogenase-like hydrolase CCR98_RS14225 PF01979 Amidohydrolase family CCR98_RS14230 PF08207 Elongation factor P (EF-P) KOW-like domain CCR98_RS14230 PF09285 Elongation factor P, C-terminal CCR98_RS14230 PF01132 Elongation factor P (EF-P) OB domain CCR98_RS14235 PF04055 Radical SAM superfamily CCR98_RS14240 PF03707 Bacterial signalling protein N terminal repeat CCR98_RS14240 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS14240 PF00563 EAL domain CCR98_RS14240 PF13188 PAS domain CCR98_RS14250 PF00588 SpoU rRNA Methylase family CCR98_RS14255 PF00459 Inositol monophosphatase family CCR98_RS14260 PF01435 Peptidase family M48 CCR98_RS14265 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCR98_RS14270 PF00106 short chain dehydrogenase CCR98_RS14275 PF07879 PHB/PHA accumulation regulator DNA-binding domain CCR98_RS14275 PF05233 PHB accumulation regulatory domain CCR98_RS14290 PF01119 DNA mismatch repair protein, C-terminal domain CCR98_RS14290 PF08676 MutL C terminal dimerisation domain CCR98_RS14295 PF01520 N-acetylmuramoyl-L-alanine amidase CCR98_RS14295 PF11741 AMIN domain CCR98_RS14300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CCR98_RS14305 PF01256 Carbohydrate kinase CCR98_RS14305 PF03853 YjeF-related protein N-terminus CCR98_RS14310 PF08331 Domain of unknown function (DUF1730) CCR98_RS14315 PF13742 OB-fold nucleic acid binding domain CCR98_RS14315 PF02601 Exonuclease VII, large subunit CCR98_RS14325 PF03781 Sulfatase-modifying factor enzyme 1 CCR98_RS14330 PF00570 HRDC domain CCR98_RS14330 PF01612 3'-5' exonuclease CCR98_RS14340 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS14340 PF00593 TonB dependent receptor CCR98_RS14360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CCR98_RS14360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCR98_RS14360 PF02805 Metal binding domain of Ada CCR98_RS14360 PF12833 Helix-turn-helix domain CCR98_RS14365 PF00107 Zinc-binding dehydrogenase CCR98_RS14365 PF16884 N-terminal domain of oxidoreductase CCR98_RS14390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCR98_RS14390 PF12806 Acetyl-CoA dehydrogenase C-terminal like CCR98_RS14390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS14390 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS14400 PF02779 Transketolase, pyrimidine binding domain CCR98_RS14400 PF02780 Transketolase, C-terminal domain CCR98_RS14400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CCR98_RS14415 PF00072 Response regulator receiver domain CCR98_RS14415 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS14445 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS14445 PF00114 Pilin (bacterial filament) CCR98_RS14475 PF17932 Tetracyclin repressor-like, C-terminal domain CCR98_RS14475 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS14480 PF00893 Small Multidrug Resistance protein CCR98_RS14485 PF07043 Protein of unknown function (DUF1328) CCR98_RS14490 PF01810 LysE type translocator CCR98_RS14495 PF00574 Clp protease CCR98_RS14505 PF01022 Bacterial regulatory protein, arsR family CCR98_RS14510 PF01177 Asp/Glu/Hydantoin racemase CCR98_RS14530 PF00583 Acetyltransferase (GNAT) family CCR98_RS14545 PF00216 Bacterial DNA-binding protein CCR98_RS14550 PF03147 Ferredoxin-fold anticodon binding domain CCR98_RS14550 PF03483 B3/4 domain CCR98_RS14550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CCR98_RS14550 PF01588 Putative tRNA binding domain CCR98_RS14550 PF03484 tRNA synthetase B5 domain CCR98_RS14555 PF01409 tRNA synthetases class II core domain (F) CCR98_RS14555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CCR98_RS14560 PF00453 Ribosomal protein L20 CCR98_RS14565 PF01632 Ribosomal protein L35 CCR98_RS14570 PF05198 Translation initiation factor IF-3, N-terminal domain CCR98_RS14570 PF00707 Translation initiation factor IF-3, C-terminal domain CCR98_RS14575 PF03129 Anticodon binding domain CCR98_RS14575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCR98_RS14575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCR98_RS14575 PF02824 TGS domain CCR98_RS14595 PF00041 Fibronectin type III domain CCR98_RS14595 PF00704 Glycosyl hydrolases family 18 CCR98_RS14600 PF00575 S1 RNA binding domain CCR98_RS14600 PF01138 3' exoribonuclease family, domain 1 CCR98_RS14600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CCR98_RS14600 PF00013 KH domain CCR98_RS14600 PF03725 3' exoribonuclease family, domain 2 CCR98_RS14605 PF00312 Ribosomal protein S15 CCR98_RS14610 PF09157 Pseudouridine synthase II TruB, C-terminal CCR98_RS14610 PF16198 tRNA pseudouridylate synthase B C-terminal domain CCR98_RS14610 PF01509 TruB family pseudouridylate synthase (N terminal domain) CCR98_RS14615 PF02033 Ribosome-binding factor A CCR98_RS14620 PF04760 Translation initiation factor IF-2, N-terminal region CCR98_RS14620 PF08364 Bacterial translation initiation factor IF-2 associated region CCR98_RS14620 PF11987 Translation-initiation factor 2 CCR98_RS14620 PF00009 Elongation factor Tu GTP binding domain CCR98_RS14625 PF13184 NusA-like KH domain CCR98_RS14625 PF00575 S1 RNA binding domain CCR98_RS14625 PF08529 NusA N-terminal domain CCR98_RS14630 PF02576 RimP N-terminal domain CCR98_RS14630 PF17384 RimP C-terminal SH3 domain CCR98_RS14645 PF00361 Proton-conducting membrane transporter CCR98_RS14650 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CCR98_RS14650 PF00361 Proton-conducting membrane transporter CCR98_RS14655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CCR98_RS14655 PF00361 Proton-conducting membrane transporter CCR98_RS14660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CCR98_RS14665 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CCR98_RS14670 PF12838 4Fe-4S dicluster domain CCR98_RS14675 PF00146 NADH dehydrogenase CCR98_RS14680 PF00384 Molybdopterin oxidoreductase CCR98_RS14680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CCR98_RS14680 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CCR98_RS14685 PF10531 SLBB domain CCR98_RS14685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CCR98_RS14685 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CCR98_RS14695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CCR98_RS14700 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CCR98_RS14705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CCR98_RS14710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CCR98_RS14725 PF00121 Triosephosphate isomerase CCR98_RS14735 PF00884 Sulfatase CCR98_RS14740 PF13439 Glycosyltransferase Family 4 CCR98_RS14740 PF00534 Glycosyl transferases group 1 CCR98_RS14745 PF01522 Polysaccharide deacetylase CCR98_RS14750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCR98_RS14750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCR98_RS14750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCR98_RS14750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCR98_RS14755 PF17848 Acetyl-coA carboxylase zinc finger domain CCR98_RS14755 PF01039 Carboxyl transferase domain CCR98_RS14760 PF00290 Tryptophan synthase alpha chain CCR98_RS14770 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS14775 PF03466 LysR substrate binding domain CCR98_RS14780 PF05816 Toxic anion resistance protein (TelA) CCR98_RS14790 PF17864 RuvB AAA lid domain CCR98_RS14790 PF05491 RuvB C-terminal winged helix domain CCR98_RS14790 PF05496 Holliday junction DNA helicase RuvB P-loop domain CCR98_RS14805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CCR98_RS14810 PF01416 tRNA pseudouridine synthase CCR98_RS14825 PF02774 Semialdehyde dehydrogenase, dimerisation domain CCR98_RS14825 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCR98_RS14830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCR98_RS14830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCR98_RS14835 PF01264 Chorismate synthase CCR98_RS14840 PF05175 Methyltransferase small domain CCR98_RS14845 PF02630 SCO1/SenC CCR98_RS14850 PF02666 Phosphatidylserine decarboxylase CCR98_RS14865 PF05872 Bacterial protein of unknown function (DUF853) CCR98_RS14870 PF01272 Transcription elongation factor, GreA/GreB, C-term CCR98_RS14870 PF03449 Transcription elongation factor, N-terminal CCR98_RS14880 PF18693 TRAM domain CCR98_RS14880 PF00919 Uncharacterized protein family UPF0004 CCR98_RS14880 PF04055 Radical SAM superfamily CCR98_RS14930 PF01738 Dienelactone hydrolase family CCR98_RS14945 PF00692 dUTPase CCR98_RS14955 PF10609 NUBPL iron-transfer P-loop NTPase CCR98_RS14960 PF00593 TonB dependent receptor CCR98_RS14960 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS14965 PF00593 TonB dependent receptor CCR98_RS14965 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS14970 PF00593 TonB dependent receptor CCR98_RS14970 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS14975 PF01431 Peptidase family M13 CCR98_RS14975 PF05649 Peptidase family M13 CCR98_RS15005 PF00892 EamA-like transporter family CCR98_RS15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS15010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCR98_RS15015 PF01266 FAD dependent oxidoreductase CCR98_RS15020 PF04235 Protein of unknown function (DUF418) CCR98_RS15025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCR98_RS15030 PF00877 NlpC/P60 family CCR98_RS15035 PF00877 NlpC/P60 family CCR98_RS15040 PF00375 Sodium:dicarboxylate symporter family CCR98_RS15055 PF09179 TilS substrate binding domain CCR98_RS15055 PF01171 PP-loop family CCR98_RS15055 PF11734 TilS substrate C-terminal domain CCR98_RS15060 PF02609 Exonuclease VII small subunit CCR98_RS15065 PF00348 Polyprenyl synthetase CCR98_RS15075 PF01523 Putative modulator of DNA gyrase CCR98_RS15080 PF04751 Protein of unknown function (DUF615) CCR98_RS15085 PF01523 Putative modulator of DNA gyrase CCR98_RS15095 PF10150 Ribonuclease E/G family CCR98_RS15095 PF00575 S1 RNA binding domain CCR98_RS15100 PF02545 Maf-like protein CCR98_RS15105 PF04402 Protein of unknown function (DUF541) CCR98_RS15115 PF00593 TonB dependent receptor CCR98_RS15115 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS15125 PF13520 Amino acid permease CCR98_RS15135 PF02590 Predicted SPOUT methyltransferase CCR98_RS15145 PF01467 Cytidylyltransferase-like CCR98_RS15160 PF13603 Leucyl-tRNA synthetase, Domain 2 CCR98_RS15160 PF08264 Anticodon-binding domain of tRNA CCR98_RS15160 PF00133 tRNA synthetases class I (I, L, M and V) CCR98_RS15175 PF00085 Thioredoxin CCR98_RS15185 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS15185 PF00360 Phytochrome region CCR98_RS15185 PF00563 EAL domain CCR98_RS15185 PF01590 GAF domain CCR98_RS15210 PF02592 Putative vitamin uptake transporter CCR98_RS15220 PF00144 Beta-lactamase CCR98_RS15225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCR98_RS15235 PF01588 Putative tRNA binding domain CCR98_RS15235 PF09334 tRNA synthetases class I (M) CCR98_RS15245 PF04060 Putative Fe-S cluster CCR98_RS15250 PF01042 Endoribonuclease L-PSP CCR98_RS15255 PF03706 Lysylphosphatidylglycerol synthase TM region CCR98_RS15255 PF09924 Uncharacterised conserved protein (DUF2156) CCR98_RS15285 PF08274 PhnA Zinc-Ribbon CCR98_RS15285 PF03831 PhnA domain CCR98_RS15290 PF00012 Hsp70 protein CCR98_RS15315 PF04542 Sigma-70 region 2 CCR98_RS15315 PF08281 Sigma-70, region 4 CCR98_RS15330 PF01258 Prokaryotic dksA/traR C4-type zinc finger CCR98_RS15335 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CCR98_RS15340 PF01863 Protein of unknown function DUF45 CCR98_RS15350 PF13091 PLD-like domain CCR98_RS15360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CCR98_RS15360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCR98_RS15365 PF03797 Autotransporter beta-domain CCR98_RS15365 PF00082 Subtilase family CCR98_RS15370 PF02803 Thiolase, C-terminal domain CCR98_RS15370 PF00108 Thiolase, N-terminal domain CCR98_RS15385 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS15385 PF18158 Adaptive response protein AidB N-terminal domain CCR98_RS15385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS15395 PF04679 ATP dependent DNA ligase C terminal region CCR98_RS15395 PF01068 ATP dependent DNA ligase domain CCR98_RS15395 PF04675 DNA ligase N terminus CCR98_RS15400 PF00270 DEAD/DEAH box helicase CCR98_RS15400 PF08494 DEAD/H associated CCR98_RS15400 PF00271 Helicase conserved C-terminal domain CCR98_RS15415 PF01494 FAD binding domain CCR98_RS15420 PF00313 'Cold-shock' DNA-binding domain CCR98_RS15425 PF01048 Phosphorylase superfamily CCR98_RS15430 PF00156 Phosphoribosyl transferase domain CCR98_RS15435 PF00933 Glycosyl hydrolase family 3 N terminal domain CCR98_RS15440 PF01323 DSBA-like thioredoxin domain CCR98_RS15445 PF01928 CYTH domain CCR98_RS15450 PF05958 tRNA (Uracil-5-)-methyltransferase CCR98_RS15455 PF00158 Sigma-54 interaction domain CCR98_RS15455 PF00072 Response regulator receiver domain CCR98_RS15455 PF02954 Bacterial regulatory protein, Fis family CCR98_RS15460 PF11967 Recombination protein O N terminal CCR98_RS15460 PF02565 Recombination protein O C terminal CCR98_RS15465 PF07650 KH domain CCR98_RS15465 PF01926 50S ribosome-binding GTPase CCR98_RS15470 PF14622 Ribonuclease-III-like CCR98_RS15470 PF00035 Double-stranded RNA binding motif CCR98_RS15480 PF10502 Signal peptidase, peptidase S26 CCR98_RS15485 PF00009 Elongation factor Tu GTP binding domain CCR98_RS15485 PF06421 GTP-binding protein LepA C-terminus CCR98_RS15485 PF00679 Elongation factor G C-terminus CCR98_RS15485 PF03144 Elongation factor Tu domain 2 CCR98_RS15490 PF13180 PDZ domain CCR98_RS15500 PF04542 Sigma-70 region 2 CCR98_RS15500 PF08281 Sigma-70, region 4 CCR98_RS15505 PF00378 Enoyl-CoA hydratase/isomerase CCR98_RS15505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCR98_RS15505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCR98_RS15510 PF02678 Pirin CCR98_RS15510 PF05726 Pirin C-terminal cupin domain CCR98_RS15515 PF00230 Major intrinsic protein CCR98_RS15525 PF05726 Pirin C-terminal cupin domain CCR98_RS15525 PF02678 Pirin CCR98_RS15535 PF02554 Carbon starvation protein CstA CCR98_RS15535 PF13722 5TM C-terminal transporter carbon starvation CstA CCR98_RS15540 PF04328 Selenoprotein, putative CCR98_RS15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS15555 PF00672 HAMP domain CCR98_RS15555 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS15560 PF00072 Response regulator receiver domain CCR98_RS15560 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS15575 PF08019 Phosphoethanolamine transferase EptA/EptB CCR98_RS15575 PF00884 Sulfatase CCR98_RS15595 PF07690 Major Facilitator Superfamily CCR98_RS15600 PF02347 Glycine cleavage system P-protein CCR98_RS15610 PF00324 Amino acid permease CCR98_RS15615 PF12833 Helix-turn-helix domain CCR98_RS15615 PF02311 AraC-like ligand binding domain CCR98_RS15620 PF00199 Catalase CCR98_RS15620 PF06628 Catalase-related immune-responsive CCR98_RS15620 PF18011 C-terminal domain found in long catalases CCR98_RS15640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS15640 PF00672 HAMP domain CCR98_RS15640 PF02203 Tar ligand binding domain homologue CCR98_RS15650 PF01476 LysM domain CCR98_RS15650 PF03734 L,D-transpeptidase catalytic domain CCR98_RS15655 PF04225 Opacity-associated protein A LysM-like domain CCR98_RS15655 PF01551 Peptidase family M23 CCR98_RS15665 PF00709 Adenylosuccinate synthetase CCR98_RS15675 PF01145 SPFH domain / Band 7 family CCR98_RS15680 PF12221 Bacterial membrane protein N terminal CCR98_RS15680 PF01145 SPFH domain / Band 7 family CCR98_RS15685 PF00107 Zinc-binding dehydrogenase CCR98_RS15685 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS15690 PF00072 Response regulator receiver domain CCR98_RS15695 PF01556 DnaJ C terminal domain CCR98_RS15695 PF00226 DnaJ domain CCR98_RS15700 PF08534 Redoxin CCR98_RS15710 PF00912 Transglycosylase CCR98_RS15710 PF06832 Penicillin-Binding Protein C-terminus Family CCR98_RS15710 PF00905 Penicillin binding protein transpeptidase domain CCR98_RS15715 PF01835 MG2 domain CCR98_RS15715 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CCR98_RS15715 PF07703 Alpha-2-macroglobulin bait region domain CCR98_RS15715 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CCR98_RS15715 PF17962 Bacterial macroglobulin domain 6 CCR98_RS15715 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CCR98_RS15715 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CCR98_RS15715 PF00207 Alpha-2-macroglobulin family CCR98_RS15725 PF03972 MmgE/PrpD family CCR98_RS15730 PF04303 PrpF protein CCR98_RS15740 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CCR98_RS15745 PF00694 Aconitase C-terminal domain CCR98_RS15745 PF00330 Aconitase family (aconitate hydratase) CCR98_RS15750 PF00285 Citrate synthase, C-terminal domain CCR98_RS15760 PF02954 Bacterial regulatory protein, Fis family CCR98_RS15760 PF06506 Propionate catabolism activator CCR98_RS15760 PF00158 Sigma-54 interaction domain CCR98_RS15775 PF01243 Pyridoxamine 5'-phosphate oxidase CCR98_RS15775 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CCR98_RS15790 PF01202 Shikimate kinase CCR98_RS15795 PF01761 3-dehydroquinate synthase CCR98_RS15805 PF01208 Uroporphyrinogen decarboxylase (URO-D) CCR98_RS15810 PF07690 Major Facilitator Superfamily CCR98_RS15815 PF17149 Periplasmic sensor domain found in signal transduction proteins CCR98_RS15815 PF00072 Response regulator receiver domain CCR98_RS15815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS15815 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS15815 PF01627 Hpt domain CCR98_RS15815 PF00672 HAMP domain CCR98_RS15820 PF01627 Hpt domain CCR98_RS15820 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS15820 PF00072 Response regulator receiver domain CCR98_RS15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS15830 PF01292 Prokaryotic cytochrome b561 CCR98_RS15845 PF03313 Serine dehydratase alpha chain CCR98_RS15845 PF03315 Serine dehydratase beta chain CCR98_RS15850 PF00561 alpha/beta hydrolase fold CCR98_RS15855 PF00742 Homoserine dehydrogenase CCR98_RS15855 PF00696 Amino acid kinase family CCR98_RS15855 PF03447 Homoserine dehydrogenase, NAD binding domain CCR98_RS15860 PF01053 Cys/Met metabolism PLP-dependent enzyme CCR98_RS15865 PF00561 alpha/beta hydrolase fold CCR98_RS15870 PF01551 Peptidase family M23 CCR98_RS15870 PF08525 Opacity-associated protein A N-terminal motif CCR98_RS15870 PF01476 LysM domain CCR98_RS15875 PF00009 Elongation factor Tu GTP binding domain CCR98_RS15875 PF16658 Class II release factor RF3, C-terminal domain CCR98_RS15880 PF03006 Haemolysin-III related CCR98_RS15885 PF05170 AsmA family CCR98_RS15895 PF00535 Glycosyl transferase family 2 CCR98_RS15900 PF00912 Transglycosylase CCR98_RS15905 PF01430 Hsp33 protein CCR98_RS15915 PF00593 TonB dependent receptor CCR98_RS15915 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS15920 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS15930 PF09317 Domain of unknown function (DUF1974) CCR98_RS15930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCR98_RS15930 PF02770 Acyl-CoA dehydrogenase, middle domain CCR98_RS15930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCR98_RS15965 PF03466 LysR substrate binding domain CCR98_RS15965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS15975 PF01597 Glycine cleavage H-protein CCR98_RS15980 PF08669 Glycine cleavage T-protein C-terminal barrel domain CCR98_RS15980 PF01571 Aminomethyltransferase folate-binding domain CCR98_RS15990 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CCR98_RS15995 PF03819 MazG nucleotide pyrophosphohydrolase domain CCR98_RS16000 PF00459 Inositol monophosphatase family CCR98_RS16005 PF00293 NUDIX domain CCR98_RS16010 PF00202 Aminotransferase class-III CCR98_RS16015 PF04452 RNA methyltransferase CCR98_RS16030 PF01584 CheW-like domain CCR98_RS16030 PF02895 Signal transducing histidine kinase, homodimeric domain CCR98_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS16030 PF01627 Hpt domain CCR98_RS16030 PF00072 Response regulator receiver domain CCR98_RS16035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS16035 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CCR98_RS16040 PF01584 CheW-like domain CCR98_RS16045 PF00072 Response regulator receiver domain CCR98_RS16050 PF00072 Response regulator receiver domain CCR98_RS16055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CCR98_RS16055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CCR98_RS16065 PF00814 Glycoprotease family CCR98_RS16070 PF04851 Type III restriction enzyme, res subunit CCR98_RS16070 PF13307 Helicase C-terminal domain CCR98_RS16080 PF14814 Bifunctional transglycosylase second domain CCR98_RS16080 PF00905 Penicillin binding protein transpeptidase domain CCR98_RS16080 PF00912 Transglycosylase CCR98_RS16085 PF00535 Glycosyl transferase family 2 CCR98_RS16090 PF00535 Glycosyl transferase family 2 CCR98_RS16100 PF02824 TGS domain CCR98_RS16100 PF13291 ACT domain CCR98_RS16100 PF04607 Region found in RelA / SpoT proteins CCR98_RS16110 PF00270 DEAD/DEAH box helicase CCR98_RS16110 PF11898 Domain of unknown function (DUF3418) CCR98_RS16110 PF04408 Helicase associated domain (HA2) CCR98_RS16110 PF00271 Helicase conserved C-terminal domain CCR98_RS16110 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CCR98_RS16115 PF00210 Ferritin-like domain CCR98_RS16120 PF09382 RQC domain CCR98_RS16120 PF00270 DEAD/DEAH box helicase CCR98_RS16120 PF00271 Helicase conserved C-terminal domain CCR98_RS16120 PF00570 HRDC domain CCR98_RS16120 PF16124 RecQ zinc-binding CCR98_RS16130 PF00394 Multicopper oxidase CCR98_RS16130 PF07732 Multicopper oxidase CCR98_RS16130 PF07731 Multicopper oxidase CCR98_RS16135 PF05275 Copper resistance protein B precursor (CopB) CCR98_RS16220 PF06508 Queuosine biosynthesis protein QueC CCR98_RS16225 PF04055 Radical SAM superfamily CCR98_RS16235 PF00691 OmpA family CCR98_RS16240 PF04052 TolB amino-terminal domain CCR98_RS16240 PF07676 WD40-like Beta Propeller Repeat CCR98_RS16250 PF02472 Biopolymer transport protein ExbD/TolR CCR98_RS16255 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS16260 PF03061 Thioesterase superfamily CCR98_RS16265 PF05491 RuvB C-terminal winged helix domain CCR98_RS16265 PF17864 RuvB AAA lid domain CCR98_RS16265 PF05496 Holliday junction DNA helicase RuvB P-loop domain CCR98_RS16270 PF02705 K+ potassium transporter CCR98_RS16275 PF01330 RuvA N terminal domain CCR98_RS16275 PF07499 RuvA, C-terminal domain CCR98_RS16280 PF02075 Crossover junction endodeoxyribonuclease RuvC CCR98_RS16285 PF01709 Transcriptional regulator CCR98_RS16305 PF02938 GAD domain CCR98_RS16305 PF00152 tRNA synthetases class II (D, K and N) CCR98_RS16305 PF01336 OB-fold nucleic acid binding domain CCR98_RS16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS16330 PF03466 LysR substrate binding domain CCR98_RS16335 PF00005 ABC transporter CCR98_RS16335 PF12848 ABC transporter CCR98_RS16345 PF00999 Sodium/hydrogen exchanger family CCR98_RS16345 PF02254 TrkA-N domain CCR98_RS16350 PF01053 Cys/Met metabolism PLP-dependent enzyme CCR98_RS16355 PF00072 Response regulator receiver domain CCR98_RS16355 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS16360 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS16360 PF00672 HAMP domain CCR98_RS16360 PF16527 Two-component sensor protein CpxA, periplasmic domain CCR98_RS16370 PF02861 Clp amino terminal domain, pathogenicity island component CCR98_RS16370 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS16370 PF10431 C-terminal, D2-small domain, of ClpB protein CCR98_RS16370 PF07724 AAA domain (Cdc48 subfamily) CCR98_RS16370 PF17871 AAA lid domain CCR98_RS16390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCR98_RS16390 PF00205 Thiamine pyrophosphate enzyme, central domain CCR98_RS16390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCR98_RS16405 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS16405 PF00593 TonB dependent receptor CCR98_RS16410 PF02358 Trehalose-phosphatase CCR98_RS16415 PF00723 Glycosyl hydrolases family 15 CCR98_RS16420 PF00982 Glycosyltransferase family 20 CCR98_RS16425 PF04134 Protein of unknown function, DUF393 CCR98_RS16435 PF02578 Multi-copper polyphenol oxidoreductase laccase CCR98_RS16440 PF00849 RNA pseudouridylate synthase CCR98_RS16445 PF13525 Outer membrane lipoprotein CCR98_RS16455 PF00795 Carbon-nitrogen hydrolase CCR98_RS16455 PF02540 NAD synthase CCR98_RS16460 PF02629 CoA binding domain CCR98_RS16460 PF00549 CoA-ligase CCR98_RS16465 PF00549 CoA-ligase CCR98_RS16465 PF08442 ATP-grasp domain CCR98_RS16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS16470 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS16475 PF00072 Response regulator receiver domain CCR98_RS16475 PF00158 Sigma-54 interaction domain CCR98_RS16475 PF02954 Bacterial regulatory protein, Fis family CCR98_RS16485 PF00437 Type II/IV secretion system protein CCR98_RS16485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CCR98_RS16490 PF00114 Pilin (bacterial filament) CCR98_RS16490 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS16495 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS16495 PF00114 Pilin (bacterial filament) CCR98_RS16500 PF00482 Type II secretion system (T2SS), protein F CCR98_RS16505 PF06750 Bacterial Peptidase A24 N-terminal domain CCR98_RS16505 PF01478 Type IV leader peptidase family CCR98_RS16510 PF01121 Dephospho-CoA kinase CCR98_RS16530 PF00672 HAMP domain CCR98_RS16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS16530 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS16535 PF00072 Response regulator receiver domain CCR98_RS16535 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS16555 PF08443 RimK-like ATP-grasp domain CCR98_RS16555 PF18030 RimK PreATP-grasp domain CCR98_RS16580 PF05656 Protein of unknown function (DUF805) CCR98_RS16590 PF03797 Autotransporter beta-domain CCR98_RS16590 PF00657 GDSL-like Lipase/Acylhydrolase CCR98_RS16600 PF05690 Thiazole biosynthesis protein ThiG CCR98_RS16605 PF02390 Putative methyltransferase CCR98_RS16610 PF03600 Citrate transporter CCR98_RS16610 PF02080 TrkA-C domain CCR98_RS16625 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCR98_RS16630 PF01741 Large-conductance mechanosensitive channel, MscL CCR98_RS16640 PF01235 Sodium:alanine symporter family CCR98_RS16650 PF00588 SpoU rRNA Methylase family CCR98_RS16650 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCR98_RS16655 PF01235 Sodium:alanine symporter family CCR98_RS16660 PF13302 Acetyltransferase (GNAT) domain CCR98_RS16665 PF00873 AcrB/AcrD/AcrF family CCR98_RS16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS16670 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS16685 PF03466 LysR substrate binding domain CCR98_RS16690 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS16695 PF01661 Macro domain CCR98_RS16705 PF00274 Fructose-bisphosphate aldolase class-I CCR98_RS16710 PF02887 Pyruvate kinase, alpha/beta domain CCR98_RS16710 PF00224 Pyruvate kinase, barrel domain CCR98_RS16715 PF13419 Haloacid dehalogenase-like hydrolase CCR98_RS16720 PF00162 Phosphoglycerate kinase CCR98_RS16735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCR98_RS16735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CCR98_RS16740 PF03922 OmpW family CCR98_RS16755 PF04273 Putative phosphatase (DUF442) CCR98_RS16755 PF00753 Metallo-beta-lactamase superfamily CCR98_RS16770 PF03965 Penicillinase repressor CCR98_RS16785 PF00456 Transketolase, thiamine diphosphate binding domain CCR98_RS16785 PF02780 Transketolase, C-terminal domain CCR98_RS16785 PF02779 Transketolase, pyrimidine binding domain CCR98_RS16790 PF00375 Sodium:dicarboxylate symporter family CCR98_RS16800 PF13519 von Willebrand factor type A domain CCR98_RS16800 PF07584 Aerotolerance regulator N-terminal CCR98_RS16820 PF07726 ATPase family associated with various cellular activities (AAA) CCR98_RS16820 PF17863 AAA lid domain CCR98_RS16825 PF11741 AMIN domain CCR98_RS16825 PF00263 Bacterial type II and III secretion system protein CCR98_RS16825 PF03958 Bacterial type II/III secretion system short domain CCR98_RS16825 PF07660 Secretin and TonB N terminus short domain CCR98_RS16830 PF04351 Pilus assembly protein, PilP CCR98_RS16835 PF04350 Pilus assembly protein, PilO CCR98_RS16845 PF11104 Type IV pilus assembly protein PilM; CCR98_RS16850 PF00905 Penicillin binding protein transpeptidase domain CCR98_RS16850 PF00912 Transglycosylase CCR98_RS16850 PF17092 Penicillin-binding protein OB-like domain CCR98_RS16865 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS16865 PF03895 YadA-like membrane anchor domain CCR98_RS16865 PF05662 Coiled stalk of trimeric autotransporter adhesin CCR98_RS16865 PF05658 Head domain of trimeric autotransporter adhesin CCR98_RS16895 PF00285 Citrate synthase, C-terminal domain CCR98_RS16900 PF01197 Ribosomal protein L31 CCR98_RS16905 PF01156 Inosine-uridine preferring nucleoside hydrolase CCR98_RS16910 PF17191 RecG wedge domain CCR98_RS16910 PF00271 Helicase conserved C-terminal domain CCR98_RS16910 PF00270 DEAD/DEAH box helicase CCR98_RS16915 PF01042 Endoribonuclease L-PSP CCR98_RS16920 PF02824 TGS domain CCR98_RS16920 PF04607 Region found in RelA / SpoT proteins CCR98_RS16920 PF13291 ACT domain CCR98_RS16925 PF01192 RNA polymerase Rpb6 CCR98_RS16930 PF00625 Guanylate kinase CCR98_RS16935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CCR98_RS16935 PF01568 Molydopterin dinucleotide binding domain CCR98_RS16935 PF00384 Molybdopterin oxidoreductase CCR98_RS16940 PF01568 Molydopterin dinucleotide binding domain CCR98_RS16940 PF00384 Molybdopterin oxidoreductase CCR98_RS16940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CCR98_RS16945 PF13247 4Fe-4S dicluster domain CCR98_RS16945 PF09163 Formate dehydrogenase N, transmembrane CCR98_RS16950 PF01292 Prokaryotic cytochrome b561 CCR98_RS16955 PF04216 Protein involved in formate dehydrogenase formation CCR98_RS16960 PF03841 L-seryl-tRNA selenium transferase CCR98_RS16960 PF12390 Selenocysteine synthase N terminal CCR98_RS16965 PF09106 Elongation factor SelB, winged helix CCR98_RS16965 PF00009 Elongation factor Tu GTP binding domain CCR98_RS16965 PF03144 Elongation factor Tu domain 2 CCR98_RS16965 PF09107 Elongation factor SelB, winged helix CCR98_RS16975 PF00586 AIR synthase related protein, N-terminal domain CCR98_RS16975 PF02769 AIR synthase related protein, C-terminal domain CCR98_RS16980 PF03755 YicC-like family, N-terminal region CCR98_RS16980 PF08340 Domain of unknown function (DUF1732) CCR98_RS16985 PF03725 3' exoribonuclease family, domain 2 CCR98_RS16985 PF01138 3' exoribonuclease family, domain 1 CCR98_RS16990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCR98_RS16995 PF01725 Ham1 family CCR98_RS17000 PF04055 Radical SAM superfamily CCR98_RS17000 PF06969 HemN C-terminal domain CCR98_RS17015 PF00557 Metallopeptidase family M24 CCR98_RS17020 PF05195 Aminopeptidase P, N-terminal domain CCR98_RS17020 PF00557 Metallopeptidase family M24 CCR98_RS17025 PF03695 Uncharacterised protein family (UPF0149) CCR98_RS17035 PF05164 Cell division protein ZapA CCR98_RS17045 PF01812 5-formyltetrahydrofolate cyclo-ligase family CCR98_RS17055 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CCR98_RS17065 PF13369 Transglutaminase-like superfamily CCR98_RS17070 PF00301 Rubredoxin CCR98_RS17075 PF02581 Thiamine monophosphate synthase CCR98_RS17080 PF00202 Aminotransferase class-III CCR98_RS17085 PF00127 Copper binding proteins, plastocyanin/azurin family CCR98_RS17090 PF13419 Haloacid dehalogenase-like hydrolase CCR98_RS17095 PF00202 Aminotransferase class-III CCR98_RS17100 PF00027 Cyclic nucleotide-binding domain CCR98_RS17100 PF00520 Ion transport protein CCR98_RS17105 PF12889 Protein of unknown function (DUF3829) CCR98_RS17110 PF12889 Protein of unknown function (DUF3829) CCR98_RS17115 PF00106 short chain dehydrogenase CCR98_RS17135 PF01569 PAP2 superfamily CCR98_RS17145 PF01225 Mur ligase family, catalytic domain CCR98_RS17145 PF02875 Mur ligase family, glutamate ligase domain CCR98_RS17145 PF08245 Mur ligase middle domain CCR98_RS17155 PF00365 Phosphofructokinase CCR98_RS17175 PF03030 Inorganic H+ pyrophosphatase CCR98_RS17185 PF03544 Gram-negative bacterial TonB protein C-terminal CCR98_RS17190 PF02472 Biopolymer transport protein ExbD/TolR CCR98_RS17195 PF01618 MotA/TolQ/ExbB proton channel family CCR98_RS17200 PF04304 Protein of unknown function (DUF454) CCR98_RS17205 PF01126 Heme oxygenase CCR98_RS17215 PF00593 TonB dependent receptor CCR98_RS17215 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS17240 PF00719 Inorganic pyrophosphatase CCR98_RS17255 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS17255 PF00593 TonB dependent receptor CCR98_RS17260 PF01965 DJ-1/PfpI family CCR98_RS17260 PF12833 Helix-turn-helix domain CCR98_RS17265 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS17265 PF00072 Response regulator receiver domain CCR98_RS17275 PF13667 ThiC-associated domain CCR98_RS17275 PF01964 Radical SAM ThiC family CCR98_RS17280 PF02028 BCCT, betaine/carnitine/choline family transporter CCR98_RS17290 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CCR98_RS17290 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CCR98_RS17295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCR98_RS17295 PF00205 Thiamine pyrophosphate enzyme, central domain CCR98_RS17295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCR98_RS17305 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS17310 PF08502 LeuA allosteric (dimerisation) domain CCR98_RS17310 PF00682 HMGL-like CCR98_RS17320 PF00330 Aconitase family (aconitate hydratase) CCR98_RS17325 PF00694 Aconitase C-terminal domain CCR98_RS17330 PF00180 Isocitrate/isopropylmalate dehydrogenase CCR98_RS17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS17340 PF03466 LysR substrate binding domain CCR98_RS17345 PF00873 AcrB/AcrD/AcrF family CCR98_RS17350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS17365 PF02321 Outer membrane efflux protein CCR98_RS17375 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CCR98_RS17380 PF03279 Bacterial lipid A biosynthesis acyltransferase CCR98_RS17415 PF03949 Malic enzyme, NAD binding domain CCR98_RS17415 PF01515 Phosphate acetyl/butaryl transferase CCR98_RS17415 PF00390 Malic enzyme, N-terminal domain CCR98_RS17420 PF00375 Sodium:dicarboxylate symporter family CCR98_RS17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS17430 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS17435 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS17435 PF00072 Response regulator receiver domain CCR98_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS17445 PF08521 Two-component sensor kinase N-terminal CCR98_RS17445 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS17450 PF00072 Response regulator receiver domain CCR98_RS17450 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS17460 PF03600 Citrate transporter CCR98_RS17465 PF00106 short chain dehydrogenase CCR98_RS17480 PF03193 RsgA GTPase CCR98_RS17485 PF00155 Aminotransferase class I and II CCR98_RS17500 PF01522 Polysaccharide deacetylase CCR98_RS17505 PF00462 Glutaredoxin CCR98_RS17520 PF01979 Amidohydrolase family CCR98_RS17525 PF01979 Amidohydrolase family CCR98_RS17525 PF00449 Urease alpha-subunit, N-terminal domain CCR98_RS17530 PF01323 DSBA-like thioredoxin domain CCR98_RS17535 PF02645 Uncharacterised protein, DegV family COG1307 CCR98_RS17545 PF02321 Outer membrane efflux protein CCR98_RS17550 PF13533 Biotin-lipoyl like CCR98_RS17560 PF03466 LysR substrate binding domain CCR98_RS17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS17575 PF00360 Phytochrome region CCR98_RS17575 PF00563 EAL domain CCR98_RS17575 PF01590 GAF domain CCR98_RS17575 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS17580 PF00756 Putative esterase CCR98_RS17585 PF00107 Zinc-binding dehydrogenase CCR98_RS17585 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS17590 PF02583 Metal-sensitive transcriptional repressor CCR98_RS17595 PF03466 LysR substrate binding domain CCR98_RS17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS17600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCR98_RS17615 PF03466 LysR substrate binding domain CCR98_RS17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS17620 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS17620 PF00107 Zinc-binding dehydrogenase CCR98_RS17630 PF04107 Glutamate-cysteine ligase family 2(GCS2) CCR98_RS17640 PF12833 Helix-turn-helix domain CCR98_RS17640 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CCR98_RS17645 PF00753 Metallo-beta-lactamase superfamily CCR98_RS17645 PF10996 Beta-Casp domain CCR98_RS17645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CCR98_RS17650 PF01926 50S ribosome-binding GTPase CCR98_RS17655 PF00034 Cytochrome c CCR98_RS17660 PF01323 DSBA-like thioredoxin domain CCR98_RS17665 PF01323 DSBA-like thioredoxin domain CCR98_RS17675 PF00892 EamA-like transporter family CCR98_RS17680 PF01037 Lrp/AsnC ligand binding domain CCR98_RS17690 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS17690 PF00593 TonB dependent receptor CCR98_RS17695 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS17695 PF00593 TonB dependent receptor CCR98_RS17705 PF02472 Biopolymer transport protein ExbD/TolR CCR98_RS17710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CCR98_RS17710 PF01464 Transglycosylase SLT domain CCR98_RS17720 PF01743 Poly A polymerase head domain CCR98_RS17720 PF01966 HD domain CCR98_RS17720 PF12627 Probable RNA and SrmB- binding site of polymerase A CCR98_RS17755 PF03797 Autotransporter beta-domain CCR98_RS17755 PF16168 Adhesin of bacterial autotransporter system, probable stalk CCR98_RS17755 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS17765 PF01979 Amidohydrolase family CCR98_RS17770 PF01380 SIS domain CCR98_RS17775 PF00356 Bacterial regulatory proteins, lacI family CCR98_RS17780 PF07690 Major Facilitator Superfamily CCR98_RS17785 PF02685 Glucokinase CCR98_RS17795 PF00728 Glycosyl hydrolase family 20, catalytic domain CCR98_RS17795 PF02838 Glycosyl hydrolase family 20, domain 2 CCR98_RS17795 PF07691 PA14 domain CCR98_RS17815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CCR98_RS17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS17825 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS17830 PF00072 Response regulator receiver domain CCR98_RS17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS17835 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS17835 PF08446 PAS fold CCR98_RS17835 PF00360 Phytochrome region CCR98_RS17835 PF01590 GAF domain CCR98_RS17840 PF04972 BON domain CCR98_RS17845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCR98_RS17845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCR98_RS17855 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CCR98_RS17855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCR98_RS17870 PF11818 C-terminal domain of tail specific protease (DUF3340) CCR98_RS17870 PF17804 Tail specific protease N-terminal domain CCR98_RS17870 PF00595 PDZ domain CCR98_RS17870 PF03572 Peptidase family S41 CCR98_RS17875 PF04055 Radical SAM superfamily CCR98_RS17875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CCR98_RS17880 PF03099 Biotin/lipoate A/B protein ligase family CCR98_RS17885 PF04359 Protein of unknown function (DUF493) CCR98_RS17895 PF00768 D-alanyl-D-alanine carboxypeptidase CCR98_RS17895 PF07943 Penicillin-binding protein 5, C-terminal domain CCR98_RS17900 PF03330 Lytic transglycolase CCR98_RS17900 PF05036 Sporulation related domain CCR98_RS17905 PF13406 Transglycosylase SLT domain CCR98_RS17910 PF01098 Cell cycle protein CCR98_RS17915 PF01098 Cell cycle protein CCR98_RS17920 PF03717 Penicillin-binding Protein dimerisation domain CCR98_RS17920 PF00905 Penicillin binding protein transpeptidase domain CCR98_RS17930 PF04085 rod shape-determining protein MreC CCR98_RS17940 PF00294 pfkB family carbohydrate kinase CCR98_RS17955 PF01433 Peptidase family M1 domain CCR98_RS17955 PF11838 ERAP1-like C-terminal domain CCR98_RS17960 PF01209 ubiE/COQ5 methyltransferase family CCR98_RS17990 PF02321 Outer membrane efflux protein CCR98_RS17995 PF00873 AcrB/AcrD/AcrF family CCR98_RS18000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS18000 PF00529 HlyD membrane-fusion protein of T1SS CCR98_RS18005 PF00440 Bacterial regulatory proteins, tetR family CCR98_RS18005 PF08361 MAATS-type transcriptional repressor, C-terminal region CCR98_RS18010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCR98_RS18010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCR98_RS18015 PF00004 ATPase family associated with various cellular activities (AAA) CCR98_RS18015 PF10431 C-terminal, D2-small domain, of ClpB protein CCR98_RS18015 PF07724 AAA domain (Cdc48 subfamily) CCR98_RS18020 PF00227 Proteasome subunit CCR98_RS18030 PF02899 Phage integrase, N-terminal SAM-like domain CCR98_RS18030 PF00589 Phage integrase family CCR98_RS18040 PF01678 Diaminopimelate epimerase CCR98_RS18050 PF04304 Protein of unknown function (DUF454) CCR98_RS18055 PF00326 Prolyl oligopeptidase family CCR98_RS18055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CCR98_RS18060 PF00155 Aminotransferase class I and II CCR98_RS18065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CCR98_RS18065 PF00326 Prolyl oligopeptidase family CCR98_RS18080 PF01381 Helix-turn-helix CCR98_RS18090 PF00528 Binding-protein-dependent transport system inner membrane component CCR98_RS18095 PF00005 ABC transporter CCR98_RS18095 PF09383 NIL domain CCR98_RS18100 PF00892 EamA-like transporter family CCR98_RS18105 PF04461 Protein of unknown function (DUF520) CCR98_RS18120 PF01432 Peptidase family M3 CCR98_RS18130 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS18135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCR98_RS18150 PF01380 SIS domain CCR98_RS18155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS18160 PF00005 ABC transporter CCR98_RS18165 PF12704 MacB-like periplasmic core domain CCR98_RS18165 PF02687 FtsX-like permease family CCR98_RS18165 PF00005 ABC transporter CCR98_RS18170 PF00005 ABC transporter CCR98_RS18170 PF02687 FtsX-like permease family CCR98_RS18170 PF12704 MacB-like periplasmic core domain CCR98_RS18180 PF00072 Response regulator receiver domain CCR98_RS18180 PF02954 Bacterial regulatory protein, Fis family CCR98_RS18180 PF00158 Sigma-54 interaction domain CCR98_RS18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS18185 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS18185 PF00989 PAS fold CCR98_RS18195 PF00132 Bacterial transferase hexapeptide (six repeats) CCR98_RS18195 PF12804 MobA-like NTP transferase domain CCR98_RS18195 PF14602 Hexapeptide repeat of succinyl-transferase CCR98_RS18210 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CCR98_RS18210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CCR98_RS18215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCR98_RS18215 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCR98_RS18220 PF00231 ATP synthase CCR98_RS18225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCR98_RS18225 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCR98_RS18225 PF00306 ATP synthase alpha/beta chain, C terminal domain CCR98_RS18230 PF00213 ATP synthase delta (OSCP) subunit CCR98_RS18235 PF00430 ATP synthase B/B' CF(0) CCR98_RS18240 PF00137 ATP synthase subunit C CCR98_RS18245 PF00119 ATP synthase A chain CCR98_RS18260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCR98_RS18260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS18265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCR98_RS18265 PF02817 e3 binding domain CCR98_RS18265 PF00364 Biotin-requiring enzyme CCR98_RS18280 PF01266 FAD dependent oxidoreductase CCR98_RS18280 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CCR98_RS18285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CCR98_RS18285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CCR98_RS18290 PF03180 NLPA lipoprotein CCR98_RS18310 PF03900 Porphobilinogen deaminase, C-terminal domain CCR98_RS18310 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CCR98_RS18315 PF04397 LytTr DNA-binding domain CCR98_RS18315 PF00072 Response regulator receiver domain CCR98_RS18320 PF06580 Histidine kinase CCR98_RS18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS18325 PF02230 Phospholipase/Carboxylesterase CCR98_RS18330 PF13632 Glycosyl transferase family group 2 CCR98_RS18340 PF00593 TonB dependent receptor CCR98_RS18340 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS18345 PF10947 Protein of unknown function (DUF2628) CCR98_RS18350 PF02203 Tar ligand binding domain homologue CCR98_RS18350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS18350 PF00672 HAMP domain CCR98_RS18390 PF03797 Autotransporter beta-domain CCR98_RS18390 PF12951 Passenger-associated-transport-repeat CCR98_RS18390 PF00082 Subtilase family CCR98_RS18415 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS18430 PF07681 DoxX CCR98_RS18455 PF04539 Sigma-70 region 3 CCR98_RS18455 PF04545 Sigma-70, region 4 CCR98_RS18455 PF00140 Sigma-70 factor, region 1.2 CCR98_RS18455 PF03979 Sigma-70 factor, region 1.1 CCR98_RS18455 PF04546 Sigma-70, non-essential region CCR98_RS18455 PF04542 Sigma-70 region 2 CCR98_RS18460 PF02580 D-Tyr-tRNA(Tyr) deacylase CCR98_RS18470 PF00925 GTP cyclohydrolase II CCR98_RS18490 PF00535 Glycosyl transferase family 2 CCR98_RS18505 PF01189 16S rRNA methyltransferase RsmB/F CCR98_RS18505 PF01029 NusB family CCR98_RS18510 PF00551 Formyl transferase CCR98_RS18510 PF02911 Formyl transferase, C-terminal domain CCR98_RS18515 PF01327 Polypeptide deformylase CCR98_RS18525 PF02481 DNA recombination-mediator protein A CCR98_RS18525 PF17782 DprA winged helix domain CCR98_RS18530 PF04361 Protein of unknown function (DUF494) CCR98_RS18535 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS18535 PF00114 Pilin (bacterial filament) CCR98_RS18540 PF06271 RDD family CCR98_RS18545 PF13368 Topoisomerase C-terminal repeat CCR98_RS18545 PF01131 DNA topoisomerase CCR98_RS18545 PF01751 Toprim domain CCR98_RS18550 PF01300 Telomere recombination CCR98_RS18575 PF01343 Peptidase family S49 CCR98_RS18580 PF01554 MatE CCR98_RS18595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CCR98_RS18595 PF18074 Primosomal protein N C-terminal domain CCR98_RS18595 PF17764 3′ DNA-binding domain (3′BD) CCR98_RS18595 PF00270 DEAD/DEAH box helicase CCR98_RS18595 PF00271 Helicase conserved C-terminal domain CCR98_RS18600 PF00043 Glutathione S-transferase, C-terminal domain CCR98_RS18600 PF13417 Glutathione S-transferase, N-terminal domain CCR98_RS18610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCR98_RS18625 PF01541 GIY-YIG catalytic domain CCR98_RS18630 PF03458 UPF0126 domain CCR98_RS18635 PF00793 DAHP synthetase I family CCR98_RS18655 PF01047 MarR family CCR98_RS18670 PF00118 TCP-1/cpn60 chaperonin family CCR98_RS18675 PF00166 Chaperonin 10 Kd subunit CCR98_RS18680 PF04231 Endonuclease I CCR98_RS18685 PF03091 CutA1 divalent ion tolerance protein CCR98_RS18690 PF11412 Disulphide bond corrector protein DsbC CCR98_RS18690 PF02683 Cytochrome C biogenesis protein transmembrane region CCR98_RS18695 PF08534 Redoxin CCR98_RS18700 PF00175 Oxidoreductase NAD-binding domain CCR98_RS18700 PF00667 FAD binding domain CCR98_RS18700 PF00258 Flavodoxin CCR98_RS18705 PF02203 Tar ligand binding domain homologue CCR98_RS18705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS18705 PF00672 HAMP domain CCR98_RS18710 PF00797 N-acetyltransferase CCR98_RS18725 PF03466 LysR substrate binding domain CCR98_RS18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS18735 PF00245 Alkaline phosphatase CCR98_RS18740 PF00768 D-alanyl-D-alanine carboxypeptidase CCR98_RS18740 PF07943 Penicillin-binding protein 5, C-terminal domain CCR98_RS18750 PF02525 Flavodoxin-like fold CCR98_RS18770 PF01220 Dehydroquinase class II CCR98_RS18780 PF00364 Biotin-requiring enzyme CCR98_RS18785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCR98_RS18785 PF02785 Biotin carboxylase C-terminal domain CCR98_RS18785 PF00289 Biotin carboxylase, N-terminal domain CCR98_RS18810 PF02954 Bacterial regulatory protein, Fis family CCR98_RS18820 PF01553 Acyltransferase CCR98_RS18830 PF00782 Dual specificity phosphatase, catalytic domain CCR98_RS18835 PF12146 Serine aminopeptidase, S33 CCR98_RS18835 PF12147 Putative methyltransferase CCR98_RS18840 PF01066 CDP-alcohol phosphatidyltransferase CCR98_RS18845 PF02142 MGS-like domain CCR98_RS18845 PF01808 AICARFT/IMPCHase bienzyme CCR98_RS18850 PF02843 Phosphoribosylglycinamide synthetase, C domain CCR98_RS18850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CCR98_RS18850 PF02844 Phosphoribosylglycinamide synthetase, N domain CCR98_RS18855 PF00140 Sigma-70 factor, region 1.2 CCR98_RS18855 PF04545 Sigma-70, region 4 CCR98_RS18855 PF04542 Sigma-70 region 2 CCR98_RS18860 PF03167 Uracil DNA glycosylase superfamily CCR98_RS18865 PF00072 Response regulator receiver domain CCR98_RS18865 PF01339 CheB methylesterase CCR98_RS18870 PF18075 FtsX extracellular domain CCR98_RS18875 PF00005 ABC transporter CCR98_RS18885 PF00270 DEAD/DEAH box helicase CCR98_RS18885 PF00271 Helicase conserved C-terminal domain CCR98_RS18885 PF12300 ATP-dependent RNA helicase RhlB CCR98_RS18895 PF00085 Thioredoxin CCR98_RS18900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCR98_RS18900 PF07497 Rho termination factor, RNA-binding domain CCR98_RS18900 PF07498 Rho termination factor, N-terminal domain CCR98_RS18905 PF07694 5TMR of 5TMR-LYT CCR98_RS18905 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS18915 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CCR98_RS18945 PF03971 Monomeric isocitrate dehydrogenase CCR98_RS18955 PF03527 RHS protein CCR98_RS18955 PF05593 RHS Repeat CCR98_RS18965 PF04972 BON domain CCR98_RS18965 PF01476 LysM domain CCR98_RS18970 PF14489 QueF-like protein CCR98_RS18970 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CCR98_RS18975 PF01546 Peptidase family M20/M25/M40 CCR98_RS18975 PF07687 Peptidase dimerisation domain CCR98_RS18980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS18985 PF00873 AcrB/AcrD/AcrF family CCR98_RS18990 PF00873 AcrB/AcrD/AcrF family CCR98_RS18995 PF00593 TonB dependent receptor CCR98_RS18995 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS19000 PF12805 FUSC-like inner membrane protein yccS CCR98_RS19005 PF00106 short chain dehydrogenase CCR98_RS19010 PF07690 Major Facilitator Superfamily CCR98_RS19035 PF09297 NADH pyrophosphatase zinc ribbon domain CCR98_RS19035 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CCR98_RS19035 PF00293 NUDIX domain CCR98_RS19040 PF01521 Iron-sulphur cluster biosynthesis CCR98_RS19060 PF00563 EAL domain CCR98_RS19060 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS19060 PF00072 Response regulator receiver domain CCR98_RS19065 PF00072 Response regulator receiver domain CCR98_RS19065 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS19065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CCR98_RS19065 PF00672 HAMP domain CCR98_RS19065 PF01627 Hpt domain CCR98_RS19070 PF00210 Ferritin-like domain CCR98_RS19080 PF00293 NUDIX domain CCR98_RS19095 PF00380 Ribosomal protein S9/S16 CCR98_RS19100 PF00572 Ribosomal protein L13 CCR98_RS19105 PF03232 Ubiquinone biosynthesis protein COQ7 CCR98_RS19110 PF00893 Small Multidrug Resistance protein CCR98_RS19115 PF02675 S-adenosylmethionine decarboxylase CCR98_RS19120 PF00027 Cyclic nucleotide-binding domain CCR98_RS19120 PF00325 Bacterial regulatory proteins, crp family CCR98_RS19125 PF01925 Sulfite exporter TauE/SafE CCR98_RS19135 PF00218 Indole-3-glycerol phosphate synthase CCR98_RS19140 PF00591 Glycosyl transferase family, a/b domain CCR98_RS19140 PF02885 Glycosyl transferase family, helical bundle domain CCR98_RS19145 PF00117 Glutamine amidotransferase class-I CCR98_RS19155 PF04715 Anthranilate synthase component I, N terminal region CCR98_RS19155 PF00425 chorismate binding enzyme CCR98_RS19160 PF00781 Diacylglycerol kinase catalytic domain CCR98_RS19170 PF00834 Ribulose-phosphate 3 epimerase family CCR98_RS19175 PF05099 Tellurite resistance protein TerB CCR98_RS19175 PF00226 DnaJ domain CCR98_RS19180 PF01259 SAICAR synthetase CCR98_RS19190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CCR98_RS19190 PF00361 Proton-conducting membrane transporter CCR98_RS19190 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CCR98_RS19190 PF13244 Domain of unknown function (DUF4040) CCR98_RS19195 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CCR98_RS19200 PF00361 Proton-conducting membrane transporter CCR98_RS19205 PF01899 Na+/H+ ion antiporter subunit CCR98_RS19210 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CCR98_RS19215 PF03334 Na+/H+ antiporter subunit CCR98_RS19220 PF01699 Sodium/calcium exchanger protein CCR98_RS19235 PF04209 homogentisate 1,2-dioxygenase CCR98_RS19240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCR98_RS19245 PF01047 MarR family CCR98_RS19260 PF00854 POT family CCR98_RS19265 PF03301 Tryptophan 2,3-dioxygenase CCR98_RS19270 PF00676 Dehydrogenase E1 component CCR98_RS19275 PF02780 Transketolase, C-terminal domain CCR98_RS19275 PF02779 Transketolase, pyrimidine binding domain CCR98_RS19285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCR98_RS19285 PF00364 Biotin-requiring enzyme CCR98_RS19285 PF02817 e3 binding domain CCR98_RS19295 PF13280 WYL domain CCR98_RS19295 PF08279 HTH domain CCR98_RS19305 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS19310 PF05661 Protein of unknown function (DUF808) CCR98_RS19315 PF03109 ABC1 family CCR98_RS19320 PF00884 Sulfatase CCR98_RS19325 PF00924 Mechanosensitive ion channel CCR98_RS19325 PF12794 Mechanosensitive ion channel inner membrane domain 1 CCR98_RS19325 PF12795 Mechanosensitive ion channel porin domain CCR98_RS19340 PF01266 FAD dependent oxidoreductase CCR98_RS19340 PF04324 BFD-like [2Fe-2S] binding domain CCR98_RS19360 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS19360 PF00072 Response regulator receiver domain CCR98_RS19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS19375 PF17810 Arginine decarboxylase helical bundle domain CCR98_RS19375 PF17944 Arginine decarboxylase C-terminal helical extension CCR98_RS19375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCR98_RS19380 PF17284 Spermidine synthase tetramerisation domain CCR98_RS19400 PF00543 Nitrogen regulatory protein P-II CCR98_RS19405 PF04380 Membrane fusogenic activity CCR98_RS19420 PF01965 DJ-1/PfpI family CCR98_RS19425 PF12706 Beta-lactamase superfamily domain CCR98_RS19430 PF00857 Isochorismatase family CCR98_RS19460 PF13335 Magnesium chelatase, subunit ChlI C-terminal CCR98_RS19460 PF01078 Magnesium chelatase, subunit ChlI CCR98_RS19480 PF06055 Exopolysaccharide synthesis, ExoD CCR98_RS19485 PF07995 Glucose / Sorbosone dehydrogenase CCR98_RS19500 PF00082 Subtilase family CCR98_RS19500 PF01483 Proprotein convertase P-domain CCR98_RS19510 PF02630 SCO1/SenC CCR98_RS19515 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CCR98_RS19520 PF00510 Cytochrome c oxidase subunit III CCR98_RS19525 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCR98_RS19530 PF06481 COX Aromatic Rich Motif CCR98_RS19530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCR98_RS19535 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS19535 PF00155 Aminotransferase class I and II CCR98_RS19550 PF00155 Aminotransferase class I and II CCR98_RS19550 PF00392 Bacterial regulatory proteins, gntR family CCR98_RS19555 PF00266 Aminotransferase class-V CCR98_RS19600 PF02667 Short chain fatty acid transporter CCR98_RS19605 PF01040 UbiA prenyltransferase family CCR98_RS19620 PF00595 PDZ domain CCR98_RS19650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCR98_RS19655 PF07715 TonB-dependent Receptor Plug Domain CCR98_RS19655 PF00593 TonB dependent receptor CCR98_RS19660 PF01055 Glycosyl hydrolases family 31 CCR98_RS19660 PF17137 Domain of unknown function (DUF5110) CCR98_RS19660 PF16338 Domain of unknown function (DUF4968) CCR98_RS19665 PF01380 SIS domain CCR98_RS19670 PF00480 ROK family CCR98_RS19675 PF08013 Tagatose 6 phosphate kinase CCR98_RS19680 PF00455 DeoR C terminal sensor domain CCR98_RS19680 PF08220 DeoR-like helix-turn-helix domain CCR98_RS19685 PF01979 Amidohydrolase family CCR98_RS19690 PF00083 Sugar (and other) transporter CCR98_RS19705 PF00156 Phosphoribosyl transferase domain CCR98_RS19710 PF00654 Voltage gated chloride channel CCR98_RS19720 PF04055 Radical SAM superfamily CCR98_RS19720 PF06968 Biotin and Thiamin Synthesis associated domain CCR98_RS19725 PF00155 Aminotransferase class I and II CCR98_RS19730 PF12697 Alpha/beta hydrolase family CCR98_RS19740 PF13649 Methyltransferase domain CCR98_RS19750 PF00291 Pyridoxal-phosphate dependent enzyme CCR98_RS19760 PF01134 Glucose inhibited division protein A CCR98_RS19760 PF13932 GidA associated domain CCR98_RS19765 PF10127 RNA repair pathway DNA polymerase beta family CCR98_RS19770 PF00132 Bacterial transferase hexapeptide (six repeats) CCR98_RS19795 PF17863 AAA lid domain CCR98_RS19795 PF07726 ATPase family associated with various cellular activities (AAA) CCR98_RS19805 PF03738 Glutathionylspermidine synthase preATP-grasp CCR98_RS19820 PF00920 Dehydratase family CCR98_RS19830 PF13307 Helicase C-terminal domain CCR98_RS19830 PF06733 DEAD_2 CCR98_RS19840 PF08501 Shikimate dehydrogenase substrate binding domain CCR98_RS19840 PF01488 Shikimate / quinate 5-dehydrogenase CCR98_RS19840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CCR98_RS19855 PF00490 Delta-aminolevulinic acid dehydratase CCR98_RS19860 PF01062 Bestrophin, RFP-TM, chloride channel CCR98_RS19885 PF00326 Prolyl oligopeptidase family CCR98_RS19885 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CCR98_RS19890 PF02798 Glutathione S-transferase, N-terminal domain CCR98_RS19890 PF00043 Glutathione S-transferase, C-terminal domain CCR98_RS19895 PF03350 Uncharacterized protein family, UPF0114 CCR98_RS19910 PF02311 AraC-like ligand binding domain CCR98_RS19910 PF12833 Helix-turn-helix domain CCR98_RS19925 PF00005 ABC transporter CCR98_RS19930 PF00561 alpha/beta hydrolase fold CCR98_RS19945 PF18416 N-acetylglucosamine binding protein domain 2 CCR98_RS19945 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CCR98_RS19950 PF18416 N-acetylglucosamine binding protein domain 2 CCR98_RS19950 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CCR98_RS19965 PF03797 Autotransporter beta-domain CCR98_RS19985 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS19985 PF00072 Response regulator receiver domain CCR98_RS19995 PF05567 Neisseria PilC beta-propeller domain CCR98_RS20015 PF00114 Pilin (bacterial filament) CCR98_RS20015 PF07963 Prokaryotic N-terminal methylation motif CCR98_RS20020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS20020 PF01627 Hpt domain CCR98_RS20020 PF00072 Response regulator receiver domain CCR98_RS20020 PF00672 HAMP domain CCR98_RS20020 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS20020 PF17149 Periplasmic sensor domain found in signal transduction proteins CCR98_RS20025 PF00072 Response regulator receiver domain CCR98_RS20025 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS20035 PF04151 Bacterial pre-peptidase C-terminal domain CCR98_RS20035 PF00082 Subtilase family CCR98_RS20040 PF13018 Extended Signal Peptide of Type V secretion system CCR98_RS20040 PF05658 Head domain of trimeric autotransporter adhesin CCR98_RS20040 PF03895 YadA-like membrane anchor domain CCR98_RS20040 PF05662 Coiled stalk of trimeric autotransporter adhesin CCR98_RS20045 PF00072 Response regulator receiver domain CCR98_RS20045 PF00486 Transcriptional regulatory protein, C terminal CCR98_RS20060 PF00072 Response regulator receiver domain CCR98_RS20060 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS20105 PF00970 Oxidoreductase FAD-binding domain CCR98_RS20105 PF00111 2Fe-2S iron-sulfur cluster binding domain CCR98_RS20105 PF00175 Oxidoreductase NAD-binding domain CCR98_RS20110 PF00005 ABC transporter CCR98_RS20115 PF01061 ABC-2 type transporter CCR98_RS20125 PF02558 Ketopantoate reductase PanE/ApbA CCR98_RS20125 PF08546 Ketopantoate reductase PanE/ApbA C terminal CCR98_RS20135 PF01026 TatD related DNase CCR98_RS20145 PF08482 ATP-dependent helicase C-terminal CCR98_RS20145 PF00270 DEAD/DEAH box helicase CCR98_RS20145 PF04408 Helicase associated domain (HA2) CCR98_RS20145 PF00271 Helicase conserved C-terminal domain CCR98_RS20155 PF00849 RNA pseudouridylate synthase CCR98_RS20170 PF00248 Aldo/keto reductase family CCR98_RS20185 PF01139 tRNA-splicing ligase RtcB CCR98_RS20200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS20200 PF02203 Tar ligand binding domain homologue CCR98_RS20200 PF00672 HAMP domain CCR98_RS20205 PF00248 Aldo/keto reductase family CCR98_RS20210 PF00561 alpha/beta hydrolase fold CCR98_RS20215 PF01906 Putative heavy-metal-binding CCR98_RS20220 PF13607 Succinyl-CoA ligase like flavodoxin domain CCR98_RS20220 PF13380 CoA binding domain CCR98_RS20220 PF00583 Acetyltransferase (GNAT) family CCR98_RS20225 PF01769 Divalent cation transporter CCR98_RS20225 PF03448 MgtE intracellular N domain CCR98_RS20225 PF00571 CBS domain CCR98_RS20235 PF02254 TrkA-N domain CCR98_RS20235 PF00999 Sodium/hydrogen exchanger family CCR98_RS20240 PF12796 Ankyrin repeats (3 copies) CCR98_RS20240 PF02661 Fic/DOC family CCR98_RS20245 PF05166 YcgL domain CCR98_RS20255 PF00109 Beta-ketoacyl synthase, N-terminal domain CCR98_RS20255 PF02801 Beta-ketoacyl synthase, C-terminal domain CCR98_RS20270 PF00109 Beta-ketoacyl synthase, N-terminal domain CCR98_RS20270 PF02801 Beta-ketoacyl synthase, C-terminal domain CCR98_RS20280 PF01494 FAD binding domain CCR98_RS20300 PF00221 Aromatic amino acid lyase CCR98_RS20310 PF00535 Glycosyl transferase family 2 CCR98_RS20325 PF00550 Phosphopantetheine attachment site CCR98_RS20330 PF00550 Phosphopantetheine attachment site CCR98_RS20345 PF02322 Cytochrome bd terminal oxidase subunit II CCR98_RS20350 PF01654 Cytochrome bd terminal oxidase subunit I CCR98_RS20360 PF08281 Sigma-70, region 4 CCR98_RS20360 PF04542 Sigma-70 region 2 CCR98_RS20380 PF00293 NUDIX domain CCR98_RS20400 PF01218 Coproporphyrinogen III oxidase CCR98_RS20410 PF04239 Protein of unknown function (DUF421) CCR98_RS20415 PF00476 DNA polymerase family A CCR98_RS20415 PF01612 3'-5' exonuclease CCR98_RS20415 PF01367 5'-3' exonuclease, C-terminal SAM fold CCR98_RS20415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCR98_RS20425 PF00582 Universal stress protein family CCR98_RS20435 PF00580 UvrD/REP helicase N-terminal domain CCR98_RS20435 PF13361 UvrD-like helicase C-terminal domain CCR98_RS20445 PF13396 Phospholipase_D-nuclease N-terminal CCR98_RS20445 PF13091 PLD-like domain CCR98_RS20455 PF00471 Ribosomal protein L33 CCR98_RS20460 PF00830 Ribosomal L28 family CCR98_RS20465 PF03033 Glycosyltransferase family 28 N-terminal domain CCR98_RS20470 PF00929 Exonuclease CCR98_RS20475 PF03466 LysR substrate binding domain CCR98_RS20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS20480 PF01042 Endoribonuclease L-PSP CCR98_RS20490 PF02321 Outer membrane efflux protein CCR98_RS20495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCR98_RS20500 PF00873 AcrB/AcrD/AcrF family CCR98_RS20515 PF00535 Glycosyl transferase family 2 CCR98_RS20520 PF01370 NAD dependent epimerase/dehydratase family CCR98_RS20530 PF02195 ParB-like nuclease domain CCR98_RS20530 PF17762 HTH domain found in ParB protein CCR98_RS20535 PF13614 AAA domain CCR98_RS20540 PF02527 rRNA small subunit methyltransferase G CCR98_RS20545 PF01648 4'-phosphopantetheinyl transferase superfamily CCR98_RS20550 PF04226 Transglycosylase associated protein CCR98_RS20560 PF00171 Aldehyde dehydrogenase family CCR98_RS20565 PF00083 Sugar (and other) transporter CCR98_RS20565 PF08946 Osmosensory transporter coiled coil CCR98_RS20575 PF16177 Acetyl-coenzyme A synthetase N-terminus CCR98_RS20575 PF13193 AMP-binding enzyme C-terminal domain CCR98_RS20575 PF00501 AMP-binding enzyme CCR98_RS20580 PF00072 Response regulator receiver domain CCR98_RS20580 PF00196 Bacterial regulatory proteins, luxR family CCR98_RS20585 PF02659 Putative manganese efflux pump CCR98_RS20590 PF09456 RcsC Alpha-Beta-Loop (ABL) CCR98_RS20590 PF00512 His Kinase A (phospho-acceptor) domain CCR98_RS20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCR98_RS20590 PF00072 Response regulator receiver domain CCR98_RS20595 PF10459 Peptidase S46 CCR98_RS20600 PF00012 Hsp70 protein CCR98_RS20615 PF04357 TamB, inner membrane protein subunit of TAM complex CCR98_RS20620 PF01103 Surface antigen CCR98_RS20620 PF17243 POTRA domain TamA domain 1 CCR98_RS20620 PF07244 Surface antigen variable number repeat CCR98_RS20625 PF02092 Glycyl-tRNA synthetase beta subunit CCR98_RS20625 PF05746 DALR anticodon binding domain CCR98_RS20630 PF02091 Glycyl-tRNA synthetase alpha subunit CCR98_RS20635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CCR98_RS20635 PF00437 Type II/IV secretion system protein CCR98_RS20640 PF00958 GMP synthase C terminal domain CCR98_RS20640 PF00117 Glutamine amidotransferase class-I CCR98_RS20650 PF00902 Sec-independent protein translocase protein (TatC) CCR98_RS20655 PF02416 mttA/Hcf106 family CCR98_RS20660 PF02416 mttA/Hcf106 family CCR98_RS20670 PF00762 Ferrochelatase CCR98_RS20675 PF12697 Alpha/beta hydrolase family CCR98_RS20680 PF02203 Tar ligand binding domain homologue CCR98_RS20680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCR98_RS20680 PF00672 HAMP domain CCR98_RS20735 PF03594 Benzoate membrane transport protein CCR98_RS20750 PF01263 Aldose 1-epimerase CCR98_RS20755 PF13406 Transglycosylase SLT domain CCR98_RS20760 PF10017 Histidine-specific methyltransferase, SAM-dependent CCR98_RS20765 PF03781 Sulfatase-modifying factor enzyme 1 CCR98_RS20765 PF12867 DinB superfamily CCR98_RS20770 PF00990 Diguanylate cyclase, GGDEF domain CCR98_RS20775 PF02810 SEC-C motif CCR98_RS20780 PF01925 Sulfite exporter TauE/SafE CCR98_RS20800 PF01227 GTP cyclohydrolase I CCR98_RS20810 PF07869 Protein of unknown function (DUF1656) CCR98_RS20815 PF13533 Biotin-lipoyl like CCR98_RS20820 PF02321 Outer membrane efflux protein CCR98_RS20825 PF04632 Fusaric acid resistance protein family CCR98_RS20835 PF13538 UvrD-like helicase C-terminal domain CCR98_RS20840 PF12705 PD-(D/E)XK nuclease superfamily CCR98_RS20840 PF13361 UvrD-like helicase C-terminal domain CCR98_RS20840 PF00580 UvrD/REP helicase N-terminal domain CCR98_RS20845 PF17946 RecC C-terminal domain CCR98_RS20850 PF00005 ABC transporter CCR98_RS20855 PF02405 Permease MlaE CCR98_RS20860 PF02470 MlaD protein CCR98_RS20875 PF04333 MlaA lipoprotein CCR98_RS20880 PF00255 Glutathione peroxidase CCR98_RS20890 PF02646 RmuC family CCR98_RS20895 PF00043 Glutathione S-transferase, C-terminal domain CCR98_RS20895 PF13417 Glutathione S-transferase, N-terminal domain CCR98_RS20900 PF08240 Alcohol dehydrogenase GroES-like domain CCR98_RS20900 PF00107 Zinc-binding dehydrogenase CCR98_RS20905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCR98_RS20905 PF03466 LysR substrate binding domain CCR98_RS20910 PF01810 LysE type translocator CCR98_RS20915 PF13520 Amino acid permease CCR98_RS20925 PF10672 S-adenosylmethionine-dependent methyltransferase CCR98_RS20925 PF17785 PUA-like domain CCR98_RS20930 PF03741 Integral membrane protein TerC family CCR98_RS20935 PF01694 Rhomboid family CCR98_RS20940 PF03009 Glycerophosphoryl diester phosphodiesterase family CCR98_RS20945 PF10396 GTP-binding protein TrmE N-terminus CCR98_RS20945 PF12631 MnmE helical domain CCR98_RS20945 PF01926 50S ribosome-binding GTPase CCR98_RS20955 PF14849 YidC periplasmic domain CCR98_RS20955 PF02096 60Kd inner membrane protein CCR98_RS20960 PF00825 Ribonuclease P CCR98_RS20965 PF00468 Ribosomal protein L34