CCR98_RS00005	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CCR98_RS00010	SM00480	DNA polymerase III beta subunit
CCR98_RS00020	SM00387	Histidine kinase-like ATPases
CCR98_RS00020	SM00433	TopoisomeraseII
CCR98_RS00035	SM00028	Tetratricopeptide repeats
CCR98_RS00060	SM00155	Phospholipase D. Active site motifs.
CCR98_RS00075	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS00110	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CCR98_RS00125	SM00829	Enoylreductase
CCR98_RS00140	SM00354	helix_turn _helix lactose operon repressor
CCR98_RS00150	SM00344	helix_turn_helix ASNC type
CCR98_RS00175	SM00014	Acid phosphatase homologues
CCR98_RS00190	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS00210	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CCR98_RS00210	SM01232	CCR98_RS00210
CCR98_RS00250	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CCR98_RS00255	SM00020	Trypsin-like serine protease
CCR98_RS00265	SM00563	Phosphate acyltransferases
CCR98_RS00295	SM00387	Histidine kinase-like ATPases
CCR98_RS00295	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS00295	SM00448	cheY-homologous receiver domain
CCR98_RS00370	SM00487	DEAD-like helicases superfamily
CCR98_RS00370	SM00490	helicase superfamily c-terminal domain
CCR98_RS00440	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS00455	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS00465	SM00855	Phosphoglycerate mutase family
CCR98_RS00470	SM00867	YceI-like domain 
CCR98_RS00475	SM00155	Phospholipase D. Active site motifs.
CCR98_RS00485	SM00563	Phosphate acyltransferases
CCR98_RS00495	SM00028	Tetratricopeptide repeats
CCR98_RS00520	SM01230	CCR98_RS00520
CCR98_RS00525	SM00938	Nitrogen regulatory protein P-II
CCR98_RS00535	SM00644	CCR98_RS00535
CCR98_RS00540	SM00925	MltA specific insert domain
CCR98_RS00550	SM00855	Phosphoglycerate mutase family
CCR98_RS00580	SM00528	Domain in histone-like proteins of HNS family
CCR98_RS00630	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS00635	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS00660	SM00387	Histidine kinase-like ATPases
CCR98_RS00660	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS00665	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS00665	SM00448	cheY-homologous receiver domain
CCR98_RS00715	SM00450	Rhodanese Homology Domain
CCR98_RS00760	SM00869	Autotransporter beta-domain
CCR98_RS00780	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS00805	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS00855	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS00855	SM00448	cheY-homologous receiver domain
CCR98_RS00860	SM00062	Bacterial periplasmic substrate-binding proteins
CCR98_RS00860	SM00387	Histidine kinase-like ATPases
CCR98_RS00860	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS00860	SM00448	cheY-homologous receiver domain
CCR98_RS00965	SM00563	Phosphate acyltransferases
CCR98_RS01015	SM00100	Cyclic nucleotide-monophosphate binding domain
CCR98_RS01015	SM00267	diguanylate cyclase
CCR98_RS01035	SM00878	Biotin carboxylase C-terminal domain
CCR98_RS01165	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS01270	SM00232	JAB/MPN domain
CCR98_RS01325	SM00448	cheY-homologous receiver domain
CCR98_RS01325	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS01330	SM00387	Histidine kinase-like ATPases
CCR98_RS01425	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS01475	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS01485	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS01495	SM00387	Histidine kinase-like ATPases
CCR98_RS01500	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS01500	SM00448	cheY-homologous receiver domain
CCR98_RS01510	SM01060	CCR98_RS01510
CCR98_RS01545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCR98_RS01575	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS01575	SM00448	cheY-homologous receiver domain
CCR98_RS01605	SM00822	CCR98_RS01605
CCR98_RS01615	SM00836	DALR anticodon binding domain
CCR98_RS01615	SM01016	Arginyl tRNA synthetase N terminal dom
CCR98_RS01625	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS01625	SM00448	cheY-homologous receiver domain
CCR98_RS01645	SM00448	cheY-homologous receiver domain
CCR98_RS01645	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS01650	SM00387	Histidine kinase-like ATPases
CCR98_RS01650	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS01785	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCR98_RS01785	SM00245	tail specific protease
CCR98_RS01885	SM00400	zinc finger
CCR98_RS01885	SM00493	CCR98_RS01885
CCR98_RS01885	SM00766	DNA primase DnaG DnaB-binding
CCR98_RS01915	SM00905	Dihydroneopterin aldolase
CCR98_RS01925	SM01217	CCR98_RS01925
CCR98_RS01965	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCR98_RS01975	SM00460	Transglutaminase/protease-like homologues
CCR98_RS02015	SM01150	CCR98_RS02015
CCR98_RS02065	SM00867	YceI-like domain 
CCR98_RS02330	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CCR98_RS02335	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS02355	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS02435	SM00387	Histidine kinase-like ATPases
CCR98_RS02440	SM00448	cheY-homologous receiver domain
CCR98_RS02440	SM00850	LytTr DNA-binding domain
CCR98_RS02480	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS02480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS02480	SM00091	PAS domain
CCR98_RS02480	SM00267	diguanylate cyclase
CCR98_RS02550	SM00344	helix_turn_helix ASNC type
CCR98_RS02560	SM01005	Alanine racemase, C-terminal domain
CCR98_RS02570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS02570	SM00091	PAS domain
CCR98_RS02570	SM00387	Histidine kinase-like ATPases
CCR98_RS02570	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS02570	SM00448	cheY-homologous receiver domain
CCR98_RS02600	SM00825	Beta-ketoacyl synthase
CCR98_RS02615	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS02645	SM00855	Phosphoglycerate mutase family
CCR98_RS02665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS02685	SM00448	cheY-homologous receiver domain
CCR98_RS02685	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS02690	SM00387	Histidine kinase-like ATPases
CCR98_RS02690	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS02695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS02695	SM00387	Histidine kinase-like ATPases
CCR98_RS02695	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS02700	SM00448	cheY-homologous receiver domain
CCR98_RS02700	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS02725	SM00631	CCR98_RS02725
CCR98_RS02730	SM00487	DEAD-like helicases superfamily
CCR98_RS02730	SM00490	helicase superfamily c-terminal domain
CCR98_RS02745	SM00986	Uracil DNA glycosylase superfamily
CCR98_RS02745	SM00987	UreE urease accessory protein, C-terminal domain 
CCR98_RS02750	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS02775	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS02790	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS02850	SM00893	Electron transfer flavoprotein domain
CCR98_RS02855	SM00893	Electron transfer flavoprotein domain
CCR98_RS02890	SM00882	Coenzyme A transferase
CCR98_RS02895	SM00882	Coenzyme A transferase
CCR98_RS02915	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS02930	SM00528	Domain in histone-like proteins of HNS family
CCR98_RS03010	SM00060	Fibronectin type 3 domain
CCR98_RS03010	SM00495	Chitin-binding domain type 3
CCR98_RS03010	SM00636	CCR98_RS03010
CCR98_RS03025	SM01211	CCR98_RS03025
CCR98_RS03040	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS03150	SM00028	Tetratricopeptide repeats
CCR98_RS03165	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS03255	SM00869	Autotransporter beta-domain
CCR98_RS03260	SM00869	Autotransporter beta-domain
CCR98_RS03375	SM00842	Cell division protein FtsA
CCR98_RS03380	SM00864	Tubulin/FtsZ family, GTPase domain
CCR98_RS03380	SM00865	Tubulin/FtsZ family, C-terminal domain
CCR98_RS03400	SM00957	SecA DEAD-like domain
CCR98_RS03400	SM00958	SecA preprotein cross-linking domain
CCR98_RS03430	SM00448	cheY-homologous receiver domain
CCR98_RS03430	SM00850	LytTr DNA-binding domain
CCR98_RS03470	SM00996	S-adenosyl-L-homocysteine hydrolase
CCR98_RS03470	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CCR98_RS03495	SM00563	Phosphate acyltransferases
CCR98_RS03575	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS03585	SM00448	cheY-homologous receiver domain
CCR98_RS03585	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS03590	SM00387	Histidine kinase-like ATPases
CCR98_RS03590	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS03665	SM00650	Ribosomal RNA adenine dimethylases
CCR98_RS03810	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CCR98_RS03810	SM00475	5'-3' exonuclease
CCR98_RS03825	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CCR98_RS03825	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CCR98_RS03910	SM00028	Tetratricopeptide repeats
CCR98_RS03915	SM00937	CCR98_RS03915
CCR98_RS03925	SM00028	Tetratricopeptide repeats
CCR98_RS03945	SM01400	CCR98_RS03945
CCR98_RS03965	SM00869	Autotransporter beta-domain
CCR98_RS03970	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS03970	SM00448	cheY-homologous receiver domain
CCR98_RS03975	SM00387	Histidine kinase-like ATPases
CCR98_RS03975	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS03975	SM00448	cheY-homologous receiver domain
CCR98_RS03980	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS03980	SM00448	cheY-homologous receiver domain
CCR98_RS03985	SM00387	Histidine kinase-like ATPases
CCR98_RS03985	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS03985	SM00448	cheY-homologous receiver domain
CCR98_RS04035	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CCR98_RS04035	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CCR98_RS04040	SM00649	Ribosomal protein L11/L12
CCR98_RS04065	SM00663	RNA polymerase I subunit A N-terminus
CCR98_RS04080	SM00838	Elongation factor G C-terminus
CCR98_RS04080	SM00889	Elongation factor G, domain IV
CCR98_RS04090	SM01403	CCR98_RS04090
CCR98_RS04110	SM01382	CCR98_RS04110
CCR98_RS04110	SM01383	CCR98_RS04110
CCR98_RS04125	SM00322	K homology RNA-binding domain
CCR98_RS04145	SM01374	CCR98_RS04145
CCR98_RS04150	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CCR98_RS04215	SM00363	S4 RNA-binding domain
CCR98_RS04215	SM01390	CCR98_RS04215
CCR98_RS04220	SM00662	RNA polymerases D
CCR98_RS04260	SM00838	Elongation factor G C-terminus
CCR98_RS04315	SM00829	Enoylreductase
CCR98_RS04330	SM00363	S4 RNA-binding domain
CCR98_RS04350	SM00829	Enoylreductase
CCR98_RS04360	SM00855	Phosphoglycerate mutase family
CCR98_RS04405	SM00014	Acid phosphatase homologues
CCR98_RS04430	SM00387	Histidine kinase-like ATPases
CCR98_RS04430	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS04435	SM00448	cheY-homologous receiver domain
CCR98_RS04435	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS04455	SM01329	CCR98_RS04455
CCR98_RS04475	SM00903	Flavin reductase like domain
CCR98_RS04530	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS04530	SM00994	ClpX C4-type zinc finger
CCR98_RS04530	SM01086	C-terminal, D2-small domain, of ClpB protein
CCR98_RS04535	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS04535	SM00464	Found in ATP-dependent protease La (LON)
CCR98_RS04540	SM00411	bacterial (prokaryotic) histone like domain
CCR98_RS04580	SM00257	Lysin motif
CCR98_RS04585	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS04600	SM00479	CCR98_RS04600
CCR98_RS04605	SM00331	Sigma factor PP2C-like phosphatases
CCR98_RS04605	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CCR98_RS04650	SM00869	Autotransporter beta-domain
CCR98_RS04680	SM00240	Forkhead associated domain
CCR98_RS04690	SM00858	CCR98_RS04690
CCR98_RS04740	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS04750	SM00493	CCR98_RS04750
CCR98_RS04765	SM00460	Transglutaminase/protease-like homologues
CCR98_RS04775	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS04810	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CCR98_RS04815	SM00822	CCR98_RS04815
CCR98_RS04825	SM00825	Beta-ketoacyl synthase
CCR98_RS04935	SM00458	Ricin-type beta-trefoil
CCR98_RS04945	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCR98_RS04945	SM01134	CCR98_RS04945
CCR98_RS04960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS05000	SM00422	helix_turn_helix, mercury resistance
CCR98_RS05005	SM00822	CCR98_RS05005
CCR98_RS05025	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS05075	SM00732	Likely ribonuclease with RNase H fold.
CCR98_RS05085	SM01321	CCR98_RS05085
CCR98_RS05100	SM00924	MgtE intracellular N domain
CCR98_RS05145	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS05165	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS05315	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CCR98_RS05320	SM00671	Sel1-like repeats.
CCR98_RS05345	SM01321	CCR98_RS05345
CCR98_RS05360	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS05375	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CCR98_RS05400	SM00411	bacterial (prokaryotic) histone like domain
CCR98_RS05440	SM00860	SMI1 / KNR4 family
CCR98_RS05455	SM00642	Alpha-amylase domain
CCR98_RS05480	SM00642	Alpha-amylase domain
CCR98_RS05505	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS05510	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS05515	SM00091	PAS domain
CCR98_RS05515	SM00387	Histidine kinase-like ATPases
CCR98_RS05515	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS05515	SM00448	cheY-homologous receiver domain
CCR98_RS05520	SM00354	helix_turn _helix lactose operon repressor
CCR98_RS05575	SM00354	helix_turn _helix lactose operon repressor
CCR98_RS05580	SM00267	diguanylate cyclase
CCR98_RS05590	SM00267	diguanylate cyclase
CCR98_RS05625	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS05630	SM01091	Transporter associated domain
CCR98_RS05680	SM00448	cheY-homologous receiver domain
CCR98_RS05680	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS05685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS05685	SM00387	Histidine kinase-like ATPases
CCR98_RS05685	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS05710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS05710	SM00895	CCR98_RS05710
CCR98_RS05720	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CCR98_RS05845	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS05845	SM00448	cheY-homologous receiver domain
CCR98_RS05880	SM00244	prohibitin homologues
CCR98_RS05970	SM00904	Riboflavin kinase
CCR98_RS06025	SM00869	Autotransporter beta-domain
CCR98_RS06070	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS06070	SM00267	diguanylate cyclase
CCR98_RS06075	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS06100	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS06100	SM00962	SRP54-type protein, GTPase domain
CCR98_RS06100	SM00963	SRP54-type protein, helical bundle domain
CCR98_RS06165	SM00363	S4 RNA-binding domain
CCR98_RS06175	SM01060	CCR98_RS06175
CCR98_RS06180	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CCR98_RS06180	SM00534	ATPase domain of DNA mismatch repair MUTS family
CCR98_RS06195	SM00912	haemagglutination activity domain
CCR98_RS06240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS06240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS06335	SM00387	Histidine kinase-like ATPases
CCR98_RS06335	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS06340	SM00448	cheY-homologous receiver domain
CCR98_RS06340	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS06360	SM00267	diguanylate cyclase
CCR98_RS06380	SM00855	Phosphoglycerate mutase family
CCR98_RS06395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCR98_RS06400	SM00487	DEAD-like helicases superfamily
CCR98_RS06400	SM00490	helicase superfamily c-terminal domain
CCR98_RS06400	SM00982	CCR98_RS06400
CCR98_RS06400	SM01058	CarD-like/TRCF domain
CCR98_RS06415	SM00448	cheY-homologous receiver domain
CCR98_RS06415	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS06420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS06420	SM00387	Histidine kinase-like ATPases
CCR98_RS06420	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS06490	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS06490	SM00478	endonuclease III
CCR98_RS06490	SM01009	AlkA N-terminal domain
CCR98_RS06520	SM00487	DEAD-like helicases superfamily
CCR98_RS06520	SM00490	helicase superfamily c-terminal domain
CCR98_RS06525	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS06525	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS06525	SM00091	PAS domain
CCR98_RS06525	SM00267	diguanylate cyclase
CCR98_RS06530	SM00267	diguanylate cyclase
CCR98_RS06535	SM00363	S4 RNA-binding domain
CCR98_RS06540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCR98_RS06540	SM00267	diguanylate cyclase
CCR98_RS06575	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS06660	SM00481	DNA polymerase alpha chain like domain
CCR98_RS06725	SM00267	diguanylate cyclase
CCR98_RS06750	SM00972	Spore Coat Protein U domain
CCR98_RS06765	SM00972	Spore Coat Protein U domain
CCR98_RS06775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCR98_RS06800	SM00671	Sel1-like repeats.
CCR98_RS06805	SM01172	CCR98_RS06805
CCR98_RS06825	SM00434	DNA Topoisomerase IV
CCR98_RS06830	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS06835	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCR98_RS06880	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS06880	SM00357	Cold shock protein domain
CCR98_RS06880	SM00955	CCR98_RS06880
CCR98_RS06890	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CCR98_RS06900	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS06910	SM00448	cheY-homologous receiver domain
CCR98_RS06910	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS06915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS06915	SM00387	Histidine kinase-like ATPases
CCR98_RS06915	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS06920	SM00267	diguanylate cyclase
CCR98_RS06925	SM00479	CCR98_RS06925
CCR98_RS06955	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS06985	SM00478	endonuclease III
CCR98_RS06985	SM00525	CCR98_RS06985
CCR98_RS07010	SM00450	Rhodanese Homology Domain
CCR98_RS07015	SM00644	CCR98_RS07015
CCR98_RS07025	SM00981	CCR98_RS07025
CCR98_RS07080	SM00267	diguanylate cyclase
CCR98_RS07080	SM00448	cheY-homologous receiver domain
CCR98_RS07110	SM01230	CCR98_RS07110
CCR98_RS07120	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS07150	SM01091	Transporter associated domain
CCR98_RS07180	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS07190	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS07255	SM01001	AIR carboxylase
CCR98_RS07335	SM00487	DEAD-like helicases superfamily
CCR98_RS07335	SM00490	helicase superfamily c-terminal domain
CCR98_RS07365	SM00448	cheY-homologous receiver domain
CCR98_RS07365	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS07370	SM00387	Histidine kinase-like ATPases
CCR98_RS07370	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS07375	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS07390	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS07405	SM00226	Low molecular weight phosphatase family
CCR98_RS07415	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCR98_RS07415	SM00465	GIY-YIG type nucleases (URI domain)
CCR98_RS07450	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS07505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS07540	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS07580	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS07680	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS07900	SM01034	Sensors of blue-light using FAD
CCR98_RS07905	SM00984	UDP binding domain
CCR98_RS07935	SM00450	Rhodanese Homology Domain
CCR98_RS07955	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS07955	SM01091	Transporter associated domain
CCR98_RS07980	SM00387	Histidine kinase-like ATPases
CCR98_RS07980	SM00433	TopoisomeraseII
CCR98_RS08010	SM01192	CCR98_RS08010
CCR98_RS08010	SM01193	CCR98_RS08010
CCR98_RS08035	SM00463	Small MutS-related domain
CCR98_RS08055	SM00257	Lysin motif
CCR98_RS08070	SM01103	CCR98_RS08070
CCR98_RS08080	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08125	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08135	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CCR98_RS08175	SM00965	Secretin and TonB N terminus short domain
CCR98_RS08260	SM00670	Large family of predicted nucleotide-binding domains
CCR98_RS08275	SM01130	CCR98_RS08275
CCR98_RS08335	SM00448	cheY-homologous receiver domain
CCR98_RS08340	SM00387	Histidine kinase-like ATPases
CCR98_RS08350	SM00014	Acid phosphatase homologues
CCR98_RS08355	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS08355	SM00448	cheY-homologous receiver domain
CCR98_RS08385	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08435	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08450	SM00478	endonuclease III
CCR98_RS08455	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08455	SM00962	SRP54-type protein, GTPase domain
CCR98_RS08455	SM00963	SRP54-type protein, helical bundle domain
CCR98_RS08465	SM00387	Histidine kinase-like ATPases
CCR98_RS08495	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS08505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS08575	SM00822	CCR98_RS08575
CCR98_RS08605	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS08715	SM00271	DnaJ molecular chaperone homology domain
CCR98_RS08720	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS08745	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08765	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS08765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCR98_RS08765	SM00267	diguanylate cyclase
CCR98_RS08790	SM01323	CCR98_RS08790
CCR98_RS08810	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS08810	SM00267	diguanylate cyclase
CCR98_RS08820	SM01322	CCR98_RS08820
CCR98_RS08835	SM00357	Cold shock protein domain
CCR98_RS08860	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08860	SM00487	DEAD-like helicases superfamily
CCR98_RS08860	SM00490	helicase superfamily c-terminal domain
CCR98_RS08875	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS08940	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS08945	SM00411	bacterial (prokaryotic) histone like domain
CCR98_RS08990	SM00562	CCR98_RS08990
CCR98_RS09000	SM00028	Tetratricopeptide repeats
CCR98_RS09005	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS09015	SM00564	beta-propeller repeat
CCR98_RS09035	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS09040	SM00450	Rhodanese Homology Domain
CCR98_RS09055	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS09055	SM01240	CCR98_RS09055
CCR98_RS09140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS09160	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS09200	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS09205	SM00062	Bacterial periplasmic substrate-binding proteins
CCR98_RS09235	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS09250	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS09250	SM00450	Rhodanese Homology Domain
CCR98_RS09320	SM01130	CCR98_RS09320
CCR98_RS09335	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS09340	SM00448	cheY-homologous receiver domain
CCR98_RS09345	SM00091	PAS domain
CCR98_RS09345	SM00387	Histidine kinase-like ATPases
CCR98_RS09345	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS09350	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCR98_RS09350	SM00387	Histidine kinase-like ATPases
CCR98_RS09350	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS09350	SM00448	cheY-homologous receiver domain
CCR98_RS09355	SM00138	Methyltransferase, chemotaxis proteins 
CCR98_RS09365	SM00387	Histidine kinase-like ATPases
CCR98_RS09365	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS09365	SM00448	cheY-homologous receiver domain
CCR98_RS09370	SM01034	Sensors of blue-light using FAD
CCR98_RS09375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS09400	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS09425	SM00100	Cyclic nucleotide-monophosphate binding domain
CCR98_RS09425	SM00419	helix_turn_helix, cAMP Regulatory protein
CCR98_RS09520	SM00422	helix_turn_helix, mercury resistance
CCR98_RS09545	SM00354	helix_turn _helix lactose operon repressor
CCR98_RS09580	SM01007	Class II Aldolase and Adducin N-terminal domain
CCR98_RS09620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS09620	SM00387	Histidine kinase-like ATPases
CCR98_RS09620	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS09625	SM00448	cheY-homologous receiver domain
CCR98_RS09625	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS09655	SM00841	Elongation factor P, C-terminal
CCR98_RS09655	SM01185	CCR98_RS09655
CCR98_RS09660	SM00822	CCR98_RS09660
CCR98_RS09680	SM00899	CCR98_RS09680
CCR98_RS09705	SM00422	helix_turn_helix, mercury resistance
CCR98_RS09720	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CCR98_RS09725	SM00851	MGS-like domain
CCR98_RS09725	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CCR98_RS09760	SM00850	LytTr DNA-binding domain
CCR98_RS09770	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS09790	SM00448	cheY-homologous receiver domain
CCR98_RS09790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCR98_RS09795	SM00073	Histidine Phosphotransfer domain
CCR98_RS09795	SM00387	Histidine kinase-like ATPases
CCR98_RS09795	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS09795	SM00448	cheY-homologous receiver domain
CCR98_RS09835	SM00966	SpoVT / AbrB like domain 
CCR98_RS09865	SM00448	cheY-homologous receiver domain
CCR98_RS09875	SM00138	Methyltransferase, chemotaxis proteins 
CCR98_RS09880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS09880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS09880	SM01049	CCR98_RS09880
CCR98_RS09885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS09885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS09895	SM00260	Two component signalling adaptor domain
CCR98_RS09905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS09905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS09910	SM00073	Histidine Phosphotransfer domain
CCR98_RS09910	SM00260	Two component signalling adaptor domain
CCR98_RS09910	SM00387	Histidine kinase-like ATPases
CCR98_RS09910	SM01231	CCR98_RS09910
CCR98_RS09915	SM00448	cheY-homologous receiver domain
CCR98_RS09925	SM00260	Two component signalling adaptor domain
CCR98_RS09945	SM00073	Histidine Phosphotransfer domain
CCR98_RS09945	SM00260	Two component signalling adaptor domain
CCR98_RS09945	SM00387	Histidine kinase-like ATPases
CCR98_RS09945	SM01231	CCR98_RS09945
CCR98_RS09955	SM00448	cheY-homologous receiver domain
CCR98_RS09970	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS09970	SM00962	SRP54-type protein, GTPase domain
CCR98_RS09985	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS09985	SM00267	diguanylate cyclase
CCR98_RS10035	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS10065	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS10070	SM00448	cheY-homologous receiver domain
CCR98_RS10080	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS10080	SM00448	cheY-homologous receiver domain
CCR98_RS10130	SM00047	Lysozyme subfamily 2
CCR98_RS10175	SM00260	Two component signalling adaptor domain
CCR98_RS10175	SM00448	cheY-homologous receiver domain
CCR98_RS10180	SM00858	CCR98_RS10180
CCR98_RS10195	SM00387	Histidine kinase-like ATPases
CCR98_RS10200	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS10200	SM00267	diguanylate cyclase
CCR98_RS10200	SM00448	cheY-homologous receiver domain
CCR98_RS10205	SM00091	PAS domain
CCR98_RS10205	SM00387	Histidine kinase-like ATPases
CCR98_RS10210	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS10210	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS10210	SM00267	diguanylate cyclase
CCR98_RS10230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS10265	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS10265	SM01086	C-terminal, D2-small domain, of ClpB protein
CCR98_RS10275	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS10305	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS10305	SM00843	CCR98_RS10305
CCR98_RS10320	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS10355	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS10365	SM00838	Elongation factor G C-terminus
CCR98_RS10365	SM00889	Elongation factor G, domain IV
CCR98_RS10380	SM00387	Histidine kinase-like ATPases
CCR98_RS10380	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS10380	SM00448	cheY-homologous receiver domain
CCR98_RS10385	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS10385	SM00448	cheY-homologous receiver domain
CCR98_RS10450	SM00091	PAS domain
CCR98_RS10450	SM00387	Histidine kinase-like ATPases
CCR98_RS10450	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS10450	SM00448	cheY-homologous receiver domain
CCR98_RS10455	SM00448	cheY-homologous receiver domain
CCR98_RS10460	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCR98_RS10460	SM00387	Histidine kinase-like ATPases
CCR98_RS10460	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS10515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS10520	SM00226	Low molecular weight phosphatase family
CCR98_RS10540	SM00422	helix_turn_helix, mercury resistance
CCR98_RS10570	SM00422	helix_turn_helix, mercury resistance
CCR98_RS10595	SM00422	helix_turn_helix, mercury resistance
CCR98_RS10620	SM00746	metallochaperone-like domain
CCR98_RS10730	SM00100	Cyclic nucleotide-monophosphate binding domain
CCR98_RS10805	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CCR98_RS10810	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CCR98_RS10825	SM00091	PAS domain
CCR98_RS10825	SM00387	Histidine kinase-like ATPases
CCR98_RS10825	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS10830	SM00448	cheY-homologous receiver domain
CCR98_RS10835	SM01034	Sensors of blue-light using FAD
CCR98_RS10880	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS10925	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CCR98_RS10925	SM01232	CCR98_RS10925
CCR98_RS10935	SM01034	Sensors of blue-light using FAD
CCR98_RS10950	SM00448	cheY-homologous receiver domain
CCR98_RS10955	SM01034	Sensors of blue-light using FAD
CCR98_RS11085	SM00020	Trypsin-like serine protease
CCR98_RS11115	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CCR98_RS11125	SM00477	DNA/RNA non-specific endonuclease
CCR98_RS11125	SM00892	DNA/RNA non-specific endonuclease
CCR98_RS11150	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS11175	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS11255	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS11295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCR98_RS11295	SM00091	PAS domain
CCR98_RS11295	SM00267	diguanylate cyclase
CCR98_RS11305	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS11315	SM00448	cheY-homologous receiver domain
CCR98_RS11315	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS11320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS11320	SM00387	Histidine kinase-like ATPases
CCR98_RS11320	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS11370	SM00831	Cation transporter/ATPase, N-terminus
CCR98_RS11380	SM00387	Histidine kinase-like ATPases
CCR98_RS11380	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS11385	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS11385	SM00448	cheY-homologous receiver domain
CCR98_RS11415	SM00965	Secretin and TonB N terminus short domain
CCR98_RS11420	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS11450	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS11485	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS11520	SM00448	cheY-homologous receiver domain
CCR98_RS11520	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS11525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS11525	SM00387	Histidine kinase-like ATPases
CCR98_RS11525	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS11535	SM00822	CCR98_RS11535
CCR98_RS11555	SM00448	cheY-homologous receiver domain
CCR98_RS11555	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS11560	SM00387	Histidine kinase-like ATPases
CCR98_RS11560	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS11605	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS11605	SM00911	HWE histidine kinase
CCR98_RS11610	SM00448	cheY-homologous receiver domain
CCR98_RS11625	SM00965	Secretin and TonB N terminus short domain
CCR98_RS11705	SM00560	LamG-like jellyroll fold domain
CCR98_RS11740	SM00912	haemagglutination activity domain
CCR98_RS11755	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS11805	SM00965	Secretin and TonB N terminus short domain
CCR98_RS11810	SM00344	helix_turn_helix ASNC type
CCR98_RS11825	SM00091	PAS domain
CCR98_RS11835	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS11850	SM00100	Cyclic nucleotide-monophosphate binding domain
CCR98_RS11850	SM00419	helix_turn_helix, cAMP Regulatory protein
CCR98_RS11885	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCR98_RS11915	SM00852	Probable molybdopterin binding domain
CCR98_RS11920	SM00852	Probable molybdopterin binding domain
CCR98_RS11925	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS11990	SM00422	helix_turn_helix, mercury resistance
CCR98_RS12000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS12005	SM00226	Low molecular weight phosphatase family
CCR98_RS12085	SM00822	CCR98_RS12085
CCR98_RS12090	SM00823	Phosphopantetheine attachment site
CCR98_RS12090	SM00824	Thioesterase
CCR98_RS12145	SM00903	Flavin reductase like domain
CCR98_RS12150	SM00028	Tetratricopeptide repeats
CCR98_RS12180	SM00529	Helix-turn-helix diphteria tox regulatory element
CCR98_RS12210	SM00829	Enoylreductase
CCR98_RS12240	SM00965	Secretin and TonB N terminus short domain
CCR98_RS12280	SM00422	helix_turn_helix, mercury resistance
CCR98_RS12305	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS12325	SM00858	CCR98_RS12325
CCR98_RS12410	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS12420	SM00387	Histidine kinase-like ATPases
CCR98_RS12425	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS12425	SM00448	cheY-homologous receiver domain
CCR98_RS12445	SM00248	ankyrin repeats
CCR98_RS12510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS12510	SM00895	CCR98_RS12510
CCR98_RS12530	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS12535	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CCR98_RS12555	SM01217	CCR98_RS12555
CCR98_RS12565	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS12600	SM00481	DNA polymerase alpha chain like domain
CCR98_RS12610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS12645	SM00965	Secretin and TonB N terminus short domain
CCR98_RS12695	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS12700	SM00422	helix_turn_helix, mercury resistance
CCR98_RS12745	SM00448	cheY-homologous receiver domain
CCR98_RS12760	SM00267	diguanylate cyclase
CCR98_RS12765	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS12765	SM00091	PAS domain
CCR98_RS12765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS12790	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCR98_RS12790	SM00091	PAS domain
CCR98_RS12790	SM00267	diguanylate cyclase
CCR98_RS12795	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS12795	SM00732	Likely ribonuclease with RNase H fold.
CCR98_RS12885	SM00479	CCR98_RS12885
CCR98_RS13060	SM00422	helix_turn_helix, mercury resistance
CCR98_RS13120	SM00829	Enoylreductase
CCR98_RS13185	SM00830	Chorismate mutase type II
CCR98_RS13195	SM00240	Forkhead associated domain
CCR98_RS13225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS13225	SM00866	CCR98_RS13225
CCR98_RS13360	SM00829	Enoylreductase
CCR98_RS13375	SM00564	beta-propeller repeat
CCR98_RS13380	SM00434	DNA Topoisomerase IV
CCR98_RS13405	SM00292	breast cancer carboxy-terminal domain
CCR98_RS13405	SM00532	Ligase N family
CCR98_RS13415	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CCR98_RS13420	SM00968	SMC proteins Flexible Hinge Domain
CCR98_RS13470	SM00947	Carbonic anhydrase
CCR98_RS13490	SM00479	CCR98_RS13490
CCR98_RS13565	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS13575	SM01018	B12 binding domain
CCR98_RS13595	SM00984	UDP binding domain
CCR98_RS13615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS13620	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS13655	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CCR98_RS13665	SM00861	Transketolase, pyrimidine binding domain
CCR98_RS13715	SM00861	Transketolase, pyrimidine binding domain
CCR98_RS13760	SM00357	Cold shock protein domain
CCR98_RS13805	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS13900	SM00363	S4 RNA-binding domain
CCR98_RS13905	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS13945	SM00354	helix_turn _helix lactose operon repressor
CCR98_RS13970	SM00363	S4 RNA-binding domain
CCR98_RS13975	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS14005	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS14060	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS14065	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS14125	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CCR98_RS14140	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCR98_RS14175	SM00840	CCR98_RS14175
CCR98_RS14195	SM01234	CCR98_RS14195
CCR98_RS14230	SM00841	Elongation factor P, C-terminal
CCR98_RS14230	SM01185	CCR98_RS14230
CCR98_RS14240	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS14240	SM00267	diguanylate cyclase
CCR98_RS14240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS14270	SM00822	CCR98_RS14270
CCR98_RS14290	SM00853	MutL C terminal dimerisation domain
CCR98_RS14290	SM01340	CCR98_RS14290
CCR98_RS14295	SM00646	CCR98_RS14295
CCR98_RS14330	SM00474	3'-5' exonuclease
CCR98_RS14355	SM00822	CCR98_RS14355
CCR98_RS14360	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS14365	SM00829	Enoylreductase
CCR98_RS14395	SM00507	HNH nucleases
CCR98_RS14400	SM00861	Transketolase, pyrimidine binding domain
CCR98_RS14415	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS14415	SM00448	cheY-homologous receiver domain
CCR98_RS14430	SM00960	Roadblock/LC7 domain
CCR98_RS14505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCR98_RS14540	SM00422	helix_turn_helix, mercury resistance
CCR98_RS14545	SM00411	bacterial (prokaryotic) histone like domain
CCR98_RS14550	SM00873	B3/4 domain
CCR98_RS14550	SM00874	tRNA synthetase B5 domain
CCR98_RS14550	SM00896	Ferredoxin-fold anticodon binding domain
CCR98_RS14575	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CCR98_RS14595	SM00636	CCR98_RS14595
CCR98_RS14600	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS14600	SM00322	K homology RNA-binding domain
CCR98_RS14605	SM01387	CCR98_RS14605
CCR98_RS14625	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS14625	SM00322	K homology RNA-binding domain
CCR98_RS14680	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CCR98_RS14685	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CCR98_RS14825	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCR98_RS14860	SM00257	Lysin motif
CCR98_RS14880	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS15045	SM00098	Alkaline phosphatase homologues
CCR98_RS15055	SM00977	TilS substrate C-terminal domain
CCR98_RS15095	SM00316	Ribosomal protein S1-like RNA-binding domain
CCR98_RS15180	SM00257	Lysin motif
CCR98_RS15185	SM00267	diguanylate cyclase
CCR98_RS15185	SM01080	CCR98_RS15185
CCR98_RS15280	SM00028	Tetratricopeptide repeats
CCR98_RS15345	SM00363	S4 RNA-binding domain
CCR98_RS15350	SM00155	Phospholipase D. Active site motifs.
CCR98_RS15360	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CCR98_RS15365	SM00869	Autotransporter beta-domain
CCR98_RS15400	SM00487	DEAD-like helicases superfamily
CCR98_RS15400	SM00490	helicase superfamily c-terminal domain
CCR98_RS15420	SM00357	Cold shock protein domain
CCR98_RS15445	SM01118	CCR98_RS15445
CCR98_RS15455	SM00448	cheY-homologous receiver domain
CCR98_RS15470	SM00358	Double-stranded RNA binding motif
CCR98_RS15470	SM00535	Ribonuclease III family
CCR98_RS15485	SM00838	Elongation factor G C-terminus
CCR98_RS15490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCR98_RS15555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS15555	SM00387	Histidine kinase-like ATPases
CCR98_RS15555	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS15560	SM00448	cheY-homologous receiver domain
CCR98_RS15560	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS15615	SM00091	PAS domain
CCR98_RS15615	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS15620	SM01060	CCR98_RS15620
CCR98_RS15640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS15640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS15665	SM00788	Adenylosuccinate synthetase
CCR98_RS15675	SM00244	prohibitin homologues
CCR98_RS15680	SM00244	prohibitin homologues
CCR98_RS15685	SM00829	Enoylreductase
CCR98_RS15690	SM00448	cheY-homologous receiver domain
CCR98_RS15695	SM00271	DnaJ molecular chaperone homology domain
CCR98_RS15715	SM01359	CCR98_RS15715
CCR98_RS15715	SM01360	CCR98_RS15715
CCR98_RS15760	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS15815	SM00387	Histidine kinase-like ATPases
CCR98_RS15815	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS15815	SM00448	cheY-homologous receiver domain
CCR98_RS15820	SM00387	Histidine kinase-like ATPases
CCR98_RS15820	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS15820	SM00448	cheY-homologous receiver domain
CCR98_RS15825	SM00867	YceI-like domain 
CCR98_RS15835	SM00867	YceI-like domain 
CCR98_RS15890	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS16020	SM00260	Two component signalling adaptor domain
CCR98_RS16030	SM00073	Histidine Phosphotransfer domain
CCR98_RS16030	SM00260	Two component signalling adaptor domain
CCR98_RS16030	SM00387	Histidine kinase-like ATPases
CCR98_RS16030	SM00448	cheY-homologous receiver domain
CCR98_RS16030	SM01231	CCR98_RS16030
CCR98_RS16035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS16040	SM00260	Two component signalling adaptor domain
CCR98_RS16045	SM00448	cheY-homologous receiver domain
CCR98_RS16050	SM00448	cheY-homologous receiver domain
CCR98_RS16070	SM00491	CCR98_RS16070
CCR98_RS16100	SM00954	Region found in RelA / SpoT proteins
CCR98_RS16110	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS16110	SM00487	DEAD-like helicases superfamily
CCR98_RS16110	SM00490	helicase superfamily c-terminal domain
CCR98_RS16110	SM00847	Helicase associated domain (HA2)  Add an annotation
CCR98_RS16120	SM00341	Helicase and RNase D C-terminal
CCR98_RS16120	SM00487	DEAD-like helicases superfamily
CCR98_RS16120	SM00490	helicase superfamily c-terminal domain
CCR98_RS16120	SM00956	CCR98_RS16120
CCR98_RS16155	SM00448	cheY-homologous receiver domain
CCR98_RS16265	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS16275	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCR98_RS16335	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS16355	SM00448	cheY-homologous receiver domain
CCR98_RS16355	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS16360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS16360	SM00387	Histidine kinase-like ATPases
CCR98_RS16360	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS16370	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS16370	SM01086	C-terminal, D2-small domain, of ClpB protein
CCR98_RS16460	SM00881	CoA binding domain
CCR98_RS16470	SM00387	Histidine kinase-like ATPases
CCR98_RS16470	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS16475	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS16475	SM00448	cheY-homologous receiver domain
CCR98_RS16530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS16530	SM00387	Histidine kinase-like ATPases
CCR98_RS16530	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS16535	SM00448	cheY-homologous receiver domain
CCR98_RS16535	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS16590	SM00869	Autotransporter beta-domain
CCR98_RS16650	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CCR98_RS16695	SM00506	Appr-1"-p processing enzyme
CCR98_RS16735	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCR98_RS16755	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS16775	SM00903	Flavin reductase like domain
CCR98_RS16785	SM00861	Transketolase, pyrimidine binding domain
CCR98_RS16800	SM00028	Tetratricopeptide repeats
CCR98_RS16800	SM00327	von Willebrand factor (vWF) type A domain
CCR98_RS16805	SM00327	von Willebrand factor (vWF) type A domain
CCR98_RS16820	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS16825	SM00965	Secretin and TonB N terminus short domain
CCR98_RS16845	SM00842	Cell division protein FtsA
CCR98_RS16910	SM00487	DEAD-like helicases superfamily
CCR98_RS16910	SM00490	helicase superfamily c-terminal domain
CCR98_RS16920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCR98_RS16920	SM00954	Region found in RelA / SpoT proteins
CCR98_RS16925	SM01409	CCR98_RS16925
CCR98_RS16930	SM00072	Guanylate kinase homologues.
CCR98_RS16935	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCR98_RS17000	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS17020	SM01011	Aminopeptidase P, N-terminal domain
CCR98_RS17140	SM00464	Found in ATP-dependent protease La (LON)
CCR98_RS17215	SM00965	Secretin and TonB N terminus short domain
CCR98_RS17260	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS17265	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS17310	SM00917	LeuA allosteric (dimerisation) domain
CCR98_RS17330	SM01329	CCR98_RS17330
CCR98_RS17385	SM01321	CCR98_RS17385
CCR98_RS17415	SM00919	Malic enzyme, NAD binding domain
CCR98_RS17415	SM01274	CCR98_RS17415
CCR98_RS17430	SM00387	Histidine kinase-like ATPases
CCR98_RS17430	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS17430	SM00448	cheY-homologous receiver domain
CCR98_RS17435	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS17435	SM00448	cheY-homologous receiver domain
CCR98_RS17445	SM00387	Histidine kinase-like ATPases
CCR98_RS17445	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS17450	SM00448	cheY-homologous receiver domain
CCR98_RS17450	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS17465	SM00822	CCR98_RS17465
CCR98_RS17475	SM01154	CCR98_RS17475
CCR98_RS17505	SM00450	Rhodanese Homology Domain
CCR98_RS17575	SM00267	diguanylate cyclase
CCR98_RS17585	SM00829	Enoylreductase
CCR98_RS17620	SM00829	Enoylreductase
CCR98_RS17640	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS17645	SM00849	Metallo-beta-lactamase superfamily
CCR98_RS17680	SM00344	helix_turn_helix ASNC type
CCR98_RS17755	SM00869	Autotransporter beta-domain
CCR98_RS17775	SM00354	helix_turn _helix lactose operon repressor
CCR98_RS17825	SM00387	Histidine kinase-like ATPases
CCR98_RS17825	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS17825	SM00448	cheY-homologous receiver domain
CCR98_RS17830	SM00448	cheY-homologous receiver domain
CCR98_RS17835	SM00387	Histidine kinase-like ATPases
CCR98_RS17835	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS17840	SM00749	bacterial OsmY and nodulation domain
CCR98_RS17855	SM01350	CCR98_RS17855
CCR98_RS17870	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCR98_RS17870	SM00245	tail specific protease
CCR98_RS17875	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS17895	SM00936	Penicillin-binding protein 5, C-terminal domain 
CCR98_RS17935	SM00268	Actin
CCR98_RS17955	SM01263	CCR98_RS17955
CCR98_RS17985	SM01321	CCR98_RS17985
CCR98_RS18015	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18015	SM01086	C-terminal, D2-small domain, of ClpB protein
CCR98_RS18080	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS18095	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18095	SM00930	CCR98_RS18095
CCR98_RS18115	SM00822	CCR98_RS18115
CCR98_RS18145	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS18160	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18180	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18180	SM00448	cheY-homologous receiver domain
CCR98_RS18185	SM00387	Histidine kinase-like ATPases
CCR98_RS18215	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18270	SM00986	Uracil DNA glycosylase superfamily
CCR98_RS18270	SM00987	UreE urease accessory protein, C-terminal domain 
CCR98_RS18315	SM00448	cheY-homologous receiver domain
CCR98_RS18315	SM00850	LytTr DNA-binding domain
CCR98_RS18350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS18350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS18360	SM00245	tail specific protease
CCR98_RS18390	SM00869	Autotransporter beta-domain
CCR98_RS18405	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS18425	SM00528	Domain in histone-like proteins of HNS family
CCR98_RS18520	SM00257	Lysin motif
CCR98_RS18545	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CCR98_RS18545	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CCR98_RS18545	SM00493	CCR98_RS18545
CCR98_RS18595	SM00487	DEAD-like helicases superfamily
CCR98_RS18595	SM00490	helicase superfamily c-terminal domain
CCR98_RS18655	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCR98_RS18675	SM00883	Chaperonin 10 Kd subunit
CCR98_RS18705	SM00091	PAS domain
CCR98_RS18705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS18705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS18720	SM00062	Bacterial periplasmic substrate-binding proteins
CCR98_RS18730	SM00974	CCR98_RS18730
CCR98_RS18735	SM00098	Alkaline phosphatase homologues
CCR98_RS18785	SM00878	Biotin carboxylase C-terminal domain
CCR98_RS18820	SM00563	Phosphate acyltransferases
CCR98_RS18830	SM00195	Dual specificity phosphatase, catalytic domain
CCR98_RS18845	SM00798	AICARFT/IMPCHase bienzyme
CCR98_RS18845	SM00851	MGS-like domain
CCR98_RS18850	SM01209	CCR98_RS18850
CCR98_RS18850	SM01210	CCR98_RS18850
CCR98_RS18860	SM00986	Uracil DNA glycosylase superfamily
CCR98_RS18860	SM00987	UreE urease accessory protein, C-terminal domain 
CCR98_RS18865	SM00448	cheY-homologous receiver domain
CCR98_RS18875	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18885	SM00487	DEAD-like helicases superfamily
CCR98_RS18885	SM00490	helicase superfamily c-terminal domain
CCR98_RS18900	SM00357	Cold shock protein domain
CCR98_RS18900	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS18900	SM00959	Rho termination factor, N-terminal domain
CCR98_RS18905	SM00267	diguanylate cyclase
CCR98_RS18920	SM01252	CCR98_RS18920
CCR98_RS18930	SM00960	Roadblock/LC7 domain
CCR98_RS18965	SM00257	Lysin motif
CCR98_RS19010	SM00563	Phosphate acyltransferases
CCR98_RS19060	SM00052	Putative diguanylate phosphodiesterase
CCR98_RS19060	SM00267	diguanylate cyclase
CCR98_RS19060	SM00448	cheY-homologous receiver domain
CCR98_RS19065	SM00073	Histidine Phosphotransfer domain
CCR98_RS19065	SM00387	Histidine kinase-like ATPases
CCR98_RS19065	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS19065	SM00448	cheY-homologous receiver domain
CCR98_RS19120	SM00100	Cyclic nucleotide-monophosphate binding domain
CCR98_RS19120	SM00419	helix_turn_helix, cAMP Regulatory protein
CCR98_RS19160	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CCR98_RS19175	SM00271	DnaJ molecular chaperone homology domain
CCR98_RS19245	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCR98_RS19275	SM00861	Transketolase, pyrimidine binding domain
CCR98_RS19280	SM00326	Src homology 3 domains
CCR98_RS19305	SM00267	diguanylate cyclase
CCR98_RS19360	SM00448	cheY-homologous receiver domain
CCR98_RS19360	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS19365	SM00387	Histidine kinase-like ATPases
CCR98_RS19400	SM00938	Nitrogen regulatory protein P-II
CCR98_RS19420	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS19460	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS19535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS19550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCR98_RS19570	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS19570	SM00871	Bacterial transcription activator, effector binding domain
CCR98_RS19615	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS19660	SM00776	CCR98_RS19660
CCR98_RS19680	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCR98_RS19680	SM01134	CCR98_RS19680
CCR98_RS19720	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCR98_RS19720	SM00876	Biotin and Thiamin Synthesis associated domain
CCR98_RS19760	SM01228	CCR98_RS19760
CCR98_RS19795	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS19830	SM00491	CCR98_RS19830
CCR98_RS19855	SM01004	Delta-aminolevulinic acid dehydratase
CCR98_RS19910	SM00342	helix_turn_helix, arabinose operon control protein
CCR98_RS19925	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS19960	SM00404	Protein tyrosine phosphatase, catalytic domain motif
CCR98_RS19965	SM00869	Autotransporter beta-domain
CCR98_RS19985	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS19985	SM00448	cheY-homologous receiver domain
CCR98_RS20020	SM00062	Bacterial periplasmic substrate-binding proteins
CCR98_RS20020	SM00387	Histidine kinase-like ATPases
CCR98_RS20020	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS20020	SM00448	cheY-homologous receiver domain
CCR98_RS20025	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS20025	SM00448	cheY-homologous receiver domain
CCR98_RS20045	SM00448	cheY-homologous receiver domain
CCR98_RS20045	SM00862	Transcriptional regulatory protein, C terminal
CCR98_RS20060	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS20060	SM00448	cheY-homologous receiver domain
CCR98_RS20080	SM00530	Helix-turn-helix XRE-family like proteins 
CCR98_RS20110	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS20145	SM00487	DEAD-like helicases superfamily
CCR98_RS20145	SM00490	helicase superfamily c-terminal domain
CCR98_RS20145	SM00847	Helicase associated domain (HA2)  Add an annotation
CCR98_RS20180	SM00244	prohibitin homologues
CCR98_RS20200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS20200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCR98_RS20220	SM00881	CoA binding domain
CCR98_RS20225	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCR98_RS20225	SM00924	MgtE intracellular N domain
CCR98_RS20240	SM00248	ankyrin repeats
CCR98_RS20255	SM00825	Beta-ketoacyl synthase
CCR98_RS20260	SM00822	CCR98_RS20260
CCR98_RS20270	SM00825	Beta-ketoacyl synthase
CCR98_RS20335	SM00563	Phosphate acyltransferases
CCR98_RS20415	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CCR98_RS20415	SM00474	3'-5' exonuclease
CCR98_RS20415	SM00475	5'-3' exonuclease
CCR98_RS20415	SM00482	DNA polymerase A domain
CCR98_RS20445	SM00155	Phospholipase D. Active site motifs.
CCR98_RS20470	SM00479	CCR98_RS20470
CCR98_RS20510	SM01259	CCR98_RS20510
CCR98_RS20530	SM00470	ParB-like nuclease domain
CCR98_RS20580	SM00421	helix_turn_helix, Lux Regulon
CCR98_RS20580	SM00448	cheY-homologous receiver domain
CCR98_RS20590	SM00091	PAS domain
CCR98_RS20590	SM00387	Histidine kinase-like ATPases
CCR98_RS20590	SM00388	His Kinase A (phosphoacceptor) domain
CCR98_RS20590	SM00448	cheY-homologous receiver domain
CCR98_RS20625	SM00836	DALR anticodon binding domain
CCR98_RS20635	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS20680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCR98_RS20770	SM00267	diguanylate cyclase
CCR98_RS20805	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCR98_RS20850	SM00382	ATPases associated with a variety of cellular activities
CCR98_RS20900	SM00829	Enoylreductase
CCR98_RS20950	SM00028	Tetratricopeptide repeats
