locus-tag class description SLY_RS00005 PF00308 Bacterial dnaA protein SLY_RS00005 PF11638 DnaA N-terminal domain SLY_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SLY_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SLY_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SLY_RS00040 PF00753 Metallo-beta-lactamase superfamily SLY_RS00040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SLY_RS00040 PF17770 Ribonuclease J C-terminal domain SLY_RS00080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SLY_RS00085 PF17770 Ribonuclease J C-terminal domain SLY_RS00085 PF00753 Metallo-beta-lactamase superfamily SLY_RS00085 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SLY_RS00090 PF03960 ArsC family SLY_RS00110 PF03129 Anticodon binding domain SLY_RS00110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SLY_RS00110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SLY_RS00115 PF01368 DHH family SLY_RS00115 PF02272 DHHA1 domain SLY_RS00120 PF01926 50S ribosome-binding GTPase SLY_RS00120 PF10396 GTP-binding protein TrmE N-terminus SLY_RS00120 PF12631 MnmE helical domain SLY_RS00130 PF02272 DHHA1 domain SLY_RS00130 PF01368 DHH family SLY_RS00150 PF00005 ABC transporter SLY_RS00150 PF08402 TOBE domain SLY_RS00155 PF01336 OB-fold nucleic acid binding domain SLY_RS00155 PF00152 tRNA synthetases class II (D, K and N) SLY_RS00175 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SLY_RS00175 PF01348 Type II intron maturase SLY_RS00190 PF03796 DnaB-like helicase C terminal domain SLY_RS00190 PF00772 DnaB-like helicase N terminal domain SLY_RS00195 PF00665 Integrase core domain SLY_RS00195 PF13333 Integrase core domain SLY_RS00225 PF13333 Integrase core domain SLY_RS00225 PF00665 Integrase core domain SLY_RS00230 PF01348 Type II intron maturase SLY_RS00230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SLY_RS00250 PF03796 DnaB-like helicase C terminal domain SLY_RS00250 PF00772 DnaB-like helicase N terminal domain SLY_RS00260 PF02223 Thymidylate kinase SLY_RS00280 PF00216 Bacterial DNA-binding protein SLY_RS00320 PF06480 FtsH Extracellular SLY_RS00320 PF01434 Peptidase family M41 SLY_RS00320 PF17862 AAA+ lid domain SLY_RS00320 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS00335 PF08343 Ribonucleotide reductase N-terminal SLY_RS00335 PF02867 Ribonucleotide reductase, barrel domain SLY_RS00335 PF00317 Ribonucleotide reductase, all-alpha domain SLY_RS00345 PF13274 Protein of unknown function (DUF4065) SLY_RS00350 PF03952 Enolase, N-terminal domain SLY_RS00350 PF00113 Enolase, C-terminal TIM barrel domain SLY_RS00355 PF01676 Metalloenzyme superfamily SLY_RS00355 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SLY_RS00360 PF00224 Pyruvate kinase, barrel domain SLY_RS00360 PF00391 PEP-utilising enzyme, mobile domain SLY_RS00360 PF02887 Pyruvate kinase, alpha/beta domain SLY_RS00375 PF00303 Thymidylate synthase SLY_RS00380 PF00186 Dihydrofolate reductase SLY_RS00395 PF01479 S4 domain SLY_RS00395 PF00163 Ribosomal protein S4/S9 N-terminal domain SLY_RS00400 PF00689 Cation transporting ATPase, C-terminus SLY_RS00400 PF00690 Cation transporter/ATPase, N-terminus SLY_RS00405 PF02457 DisA bacterial checkpoint controller nucleotide-binding SLY_RS00410 PF02645 Uncharacterised protein, DegV family COG1307 SLY_RS00420 PF00814 Glycoprotease family SLY_RS00425 PF00772 DnaB-like helicase N terminal domain SLY_RS00425 PF03796 DnaB-like helicase C terminal domain SLY_RS00450 PF17862 AAA+ lid domain SLY_RS00450 PF06480 FtsH Extracellular SLY_RS00450 PF01434 Peptidase family M41 SLY_RS00450 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS00490 PF00216 Bacterial DNA-binding protein SLY_RS00505 PF02223 Thymidylate kinase SLY_RS00515 PF03796 DnaB-like helicase C terminal domain SLY_RS00515 PF00772 DnaB-like helicase N terminal domain SLY_RS00550 PF02660 Glycerol-3-phosphate acyltransferase SLY_RS00570 PF04026 SpoVG SLY_RS00575 PF00398 Ribosomal RNA adenine dimethylase SLY_RS00580 PF01966 HD domain SLY_RS00585 PF06130 Phosphate propanoyltransferase SLY_RS00625 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS00625 PF01434 Peptidase family M41 SLY_RS00625 PF17862 AAA+ lid domain SLY_RS00645 PF04545 Sigma-70, region 4 SLY_RS00645 PF04539 Sigma-70 region 3 SLY_RS00645 PF03979 Sigma-70 factor, region 1.1 SLY_RS00645 PF00140 Sigma-70 factor, region 1.2 SLY_RS00645 PF04542 Sigma-70 region 2 SLY_RS00660 PF00145 C-5 cytosine-specific DNA methylase SLY_RS00680 PF03796 DnaB-like helicase C terminal domain SLY_RS00680 PF00772 DnaB-like helicase N terminal domain SLY_RS00690 PF02223 Thymidylate kinase SLY_RS00705 PF02086 D12 class N6 adenine-specific DNA methyltransferase SLY_RS00715 PF13274 Protein of unknown function (DUF4065) SLY_RS00750 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS00750 PF17862 AAA+ lid domain SLY_RS00750 PF01434 Peptidase family M41 SLY_RS00800 PF00665 Integrase core domain SLY_RS00800 PF13333 Integrase core domain SLY_RS00800 PF13276 HTH-like domain SLY_RS00810 PF00690 Cation transporter/ATPase, N-terminus SLY_RS00810 PF00689 Cation transporting ATPase, C-terminus SLY_RS00815 PF00133 tRNA synthetases class I (I, L, M and V) SLY_RS00815 PF08264 Anticodon-binding domain of tRNA SLY_RS00820 PF01926 50S ribosome-binding GTPase SLY_RS00820 PF06071 Protein of unknown function (DUF933) SLY_RS00825 PF03193 RsgA GTPase SLY_RS00840 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS00840 PF17862 AAA+ lid domain SLY_RS00840 PF01434 Peptidase family M41 SLY_RS00870 PF00216 Bacterial DNA-binding protein SLY_RS00900 PF02223 Thymidylate kinase SLY_RS00910 PF00772 DnaB-like helicase N terminal domain SLY_RS00910 PF03796 DnaB-like helicase C terminal domain SLY_RS00935 PF00665 Integrase core domain SLY_RS00935 PF13333 Integrase core domain SLY_RS00940 PF13333 Integrase core domain SLY_RS00940 PF00665 Integrase core domain SLY_RS00940 PF13276 HTH-like domain SLY_RS00945 PF13333 Integrase core domain SLY_RS00945 PF00665 Integrase core domain SLY_RS00960 PF00271 Helicase conserved C-terminal domain SLY_RS00960 PF00270 DEAD/DEAH box helicase SLY_RS00965 PF00497 Bacterial extracellular solute-binding proteins, family 3 SLY_RS00970 PF01687 Riboflavin kinase SLY_RS00970 PF06574 FAD synthetase SLY_RS00975 PF01541 GIY-YIG catalytic domain SLY_RS00975 PF08459 UvrC Helix-hairpin-helix N-terminal SLY_RS00980 PF04851 Type III restriction enzyme, res subunit SLY_RS00980 PF17757 UvrB interaction domain SLY_RS00980 PF12344 Ultra-violet resistance protein B SLY_RS00980 PF00271 Helicase conserved C-terminal domain SLY_RS00980 PF02151 UvrB/uvrC motif SLY_RS01085 PF00005 ABC transporter SLY_RS01090 PF00950 ABC 3 transport family SLY_RS01095 PF00950 ABC 3 transport family SLY_RS01100 PF03129 Anticodon binding domain SLY_RS01100 PF13393 Histidyl-tRNA synthetase SLY_RS01105 PF01336 OB-fold nucleic acid binding domain SLY_RS01105 PF00152 tRNA synthetases class II (D, K and N) SLY_RS01110 PF11734 TilS substrate C-terminal domain SLY_RS01110 PF01171 PP-loop family SLY_RS01115 PF01434 Peptidase family M41 SLY_RS01115 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS01115 PF17862 AAA+ lid domain SLY_RS01120 PF01479 S4 domain SLY_RS01120 PF00849 RNA pseudouridylate synthase SLY_RS01125 PF00005 ABC transporter SLY_RS01125 PF09383 NIL domain SLY_RS01140 PF06153 Cyclic-di-AMP receptor SLY_RS01145 PF00312 Ribosomal protein S15 SLY_RS01155 PF00572 Ribosomal protein L13 SLY_RS01160 PF00380 Ribosomal protein S9/S16 SLY_RS01165 PF00749 tRNA synthetases class I (E and Q), catalytic domain SLY_RS01170 PF01406 tRNA synthetases class I (C) catalytic domain SLY_RS01175 PF00881 Nitroreductase family SLY_RS01185 PF03672 Uncharacterised protein family (UPF0154) SLY_RS01205 PF01272 Transcription elongation factor, GreA/GreB, C-term SLY_RS01205 PF03449 Transcription elongation factor, N-terminal SLY_RS01210 PF01596 O-methyltransferase SLY_RS01215 PF03652 Holliday junction resolvase SLY_RS01220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SLY_RS01220 PF01411 tRNA synthetases class II (A) SLY_RS01220 PF02272 DHHA1 domain SLY_RS01225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SLY_RS01225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SLY_RS01230 PF00162 Phosphoglycerate kinase SLY_RS01235 PF01116 Fructose-bisphosphate aldolase class-II SLY_RS01245 PF00121 Triosephosphate isomerase SLY_RS01255 PF01765 Ribosome recycling factor SLY_RS01260 PF00696 Amino acid kinase family SLY_RS01265 PF00889 Elongation factor TS SLY_RS01270 PF00318 Ribosomal protein S2 SLY_RS01275 PF00692 dUTPase SLY_RS01280 PF03167 Uracil DNA glycosylase superfamily SLY_RS01290 PF17862 AAA+ lid domain SLY_RS01290 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS01290 PF01434 Peptidase family M41 SLY_RS01325 PF12704 MacB-like periplasmic core domain SLY_RS01325 PF02687 FtsX-like permease family SLY_RS01325 PF00005 ABC transporter SLY_RS01330 PF03147 Ferredoxin-fold anticodon binding domain SLY_RS01330 PF03484 tRNA synthetase B5 domain SLY_RS01330 PF03483 B3/4 domain SLY_RS01330 PF01588 Putative tRNA binding domain SLY_RS01330 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SLY_RS01335 PF01409 tRNA synthetases class II core domain (F) SLY_RS01335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SLY_RS01355 PF07733 Bacterial DNA polymerase III alpha NTPase domain SLY_RS01355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SLY_RS01355 PF14579 Helix-hairpin-helix motif SLY_RS01355 PF02811 PHP domain SLY_RS01355 PF01336 OB-fold nucleic acid binding domain SLY_RS01360 PF01336 OB-fold nucleic acid binding domain SLY_RS01360 PF00152 tRNA synthetases class II (D, K and N) SLY_RS01365 PF03099 Biotin/lipoate A/B protein ligase family SLY_RS01365 PF10437 Bacterial lipoate protein ligase C-terminus SLY_RS01375 PF01434 Peptidase family M41 SLY_RS01375 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS01375 PF17862 AAA+ lid domain SLY_RS01380 PF03485 Arginyl tRNA synthetase N terminal domain SLY_RS01380 PF05746 DALR anticodon binding domain SLY_RS01380 PF00750 tRNA synthetases class I (R) SLY_RS01390 PF11490 DNA polymerase III polC-type N-terminus II SLY_RS01390 PF14579 Helix-hairpin-helix motif SLY_RS01390 PF14480 DNA polymerase III polC-type N-terminus I SLY_RS01390 PF02811 PHP domain SLY_RS01390 PF07733 Bacterial DNA polymerase III alpha NTPase domain SLY_RS01390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SLY_RS01390 PF00929 Exonuclease SLY_RS01395 PF00579 tRNA synthetases class I (W and Y) SLY_RS01410 PF00266 Aminotransferase class-V SLY_RS01415 PF00579 tRNA synthetases class I (W and Y) SLY_RS01420 PF01245 Ribosomal protein L19 SLY_RS01425 PF01746 tRNA (Guanine-1)-methyltransferase SLY_RS01430 PF00886 Ribosomal protein S16 SLY_RS01435 PF00472 RF-1 domain SLY_RS01435 PF03462 PCRF domain SLY_RS01440 PF07517 SecA DEAD-like domain SLY_RS01440 PF01043 SecA preprotein cross-linking domain SLY_RS01440 PF07516 SecA Wing and Scaffold domain SLY_RS01450 PF01556 DnaJ C terminal domain SLY_RS01450 PF00684 DnaJ central domain SLY_RS01450 PF00226 DnaJ domain SLY_RS01455 PF00012 Hsp70 protein SLY_RS01460 PF01025 GrpE SLY_RS01465 PF01628 HrcA protein C terminal domain SLY_RS01475 PF01196 Ribosomal protein L17 SLY_RS01480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SLY_RS01480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SLY_RS01480 PF01000 RNA polymerase Rpb3/RpoA insert domain SLY_RS01485 PF00411 Ribosomal protein S11 SLY_RS01490 PF00416 Ribosomal protein S13/S18 SLY_RS01495 PF00444 Ribosomal protein L36 SLY_RS01500 PF01176 Translation initiation factor 1A / IF-1 SLY_RS01505 PF00557 Metallopeptidase family M24 SLY_RS01510 PF05191 Adenylate kinase, active site lid SLY_RS01515 PF00344 SecY translocase SLY_RS01520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SLY_RS01525 PF00327 Ribosomal protein L30p/L7e SLY_RS01530 PF00333 Ribosomal protein S5, N-terminal domain SLY_RS01530 PF03719 Ribosomal protein S5, C-terminal domain SLY_RS01535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SLY_RS01540 PF00347 Ribosomal protein L6 SLY_RS01545 PF00410 Ribosomal protein S8 SLY_RS01550 PF00253 Ribosomal protein S14p/S29e SLY_RS01555 PF00281 Ribosomal protein L5 SLY_RS01555 PF00673 ribosomal L5P family C-terminus SLY_RS01560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SLY_RS01565 PF00238 Ribosomal protein L14p/L23e SLY_RS01570 PF00366 Ribosomal protein S17 SLY_RS01575 PF00831 Ribosomal L29 protein SLY_RS01580 PF00252 Ribosomal protein L16p/L10e SLY_RS01585 PF00189 Ribosomal protein S3, C-terminal domain SLY_RS01585 PF07650 KH domain SLY_RS01590 PF00237 Ribosomal protein L22p/L17e SLY_RS01595 PF00203 Ribosomal protein S19 SLY_RS01600 PF00181 Ribosomal Proteins L2, RNA binding domain SLY_RS01600 PF03947 Ribosomal Proteins L2, C-terminal domain SLY_RS01605 PF00276 Ribosomal protein L23 SLY_RS01610 PF00573 Ribosomal protein L4/L1 family SLY_RS01615 PF00297 Ribosomal protein L3 SLY_RS01620 PF00338 Ribosomal protein S10p/S20e SLY_RS01625 PF01783 Ribosomal L32p protein family SLY_RS01635 PF09269 Domain of unknown function (DUF1967) SLY_RS01635 PF01926 50S ribosome-binding GTPase SLY_RS01635 PF01018 GTP1/OBG SLY_RS01640 PF01016 Ribosomal L27 protein SLY_RS01650 PF00829 Ribosomal prokaryotic L21 protein SLY_RS01655 PF17773 UPF0176 acylphosphatase like domain SLY_RS01655 PF12368 Rhodanase C-terminal SLY_RS01655 PF00581 Rhodanese-like domain SLY_RS01660 PF02403 Seryl-tRNA synthetase N-terminal domain SLY_RS01660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SLY_RS01675 PF01649 Ribosomal protein S20 SLY_RS01685 PF02926 THUMP domain SLY_RS01685 PF02568 Thiamine biosynthesis protein (ThiI) SLY_RS01690 PF00719 Inorganic pyrophosphatase SLY_RS01695 PF01668 SmpB protein SLY_RS01705 PF11074 Domain of unknown function(DUF2779) SLY_RS01710 PF00575 S1 RNA binding domain SLY_RS01710 PF08529 NusA N-terminal domain SLY_RS01710 PF13184 NusA-like KH domain SLY_RS01720 PF00009 Elongation factor Tu GTP binding domain SLY_RS01720 PF11987 Translation-initiation factor 2 SLY_RS01720 PF04760 Translation initiation factor IF-2, N-terminal region SLY_RS01725 PF02033 Ribosome-binding factor A SLY_RS01730 PF01195 Peptidyl-tRNA hydrolase SLY_RS01735 PF00571 CBS domain SLY_RS01735 PF01595 Cyclin M transmembrane N-terminal domain SLY_RS01735 PF03471 Transporter associated domain SLY_RS01745 PF00140 Sigma-70 factor, region 1.2 SLY_RS01745 PF04542 Sigma-70 region 2 SLY_RS01745 PF04539 Sigma-70 region 3 SLY_RS01745 PF04545 Sigma-70, region 4 SLY_RS01745 PF03979 Sigma-70 factor, region 1.1 SLY_RS01750 PF00772 DnaB-like helicase N terminal domain SLY_RS01750 PF13662 Toprim domain SLY_RS01750 PF08275 DNA primase catalytic core, N-terminal domain SLY_RS01750 PF01807 CHC2 zinc finger SLY_RS01755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SLY_RS01755 PF03129 Anticodon binding domain SLY_RS01760 PF01926 50S ribosome-binding GTPase SLY_RS01760 PF07650 KH domain SLY_RS01765 PF02130 Uncharacterized protein family UPF0054 SLY_RS01770 PF01165 Ribosomal protein S21 SLY_RS01785 PF12169 DNA polymerase III subunits gamma and tau domain III SLY_RS01800 PF01066 CDP-alcohol phosphatidyltransferase SLY_RS01805 PF02666 Phosphatidylserine decarboxylase SLY_RS01810 PF00117 Glutamine amidotransferase class-I SLY_RS01810 PF06418 CTP synthase N-terminus SLY_RS01825 PF00035 Double-stranded RNA binding motif SLY_RS01825 PF14622 Ribonuclease-III-like SLY_RS01830 PF02504 Fatty acid synthesis protein SLY_RS01840 PF01131 DNA topoisomerase SLY_RS01840 PF01396 Topoisomerase DNA binding C4 zinc finger SLY_RS01840 PF01751 Toprim domain SLY_RS01845 PF01926 50S ribosome-binding GTPase SLY_RS01855 PF01132 Elongation factor P (EF-P) OB domain SLY_RS01855 PF08207 Elongation factor P (EF-P) KOW-like domain SLY_RS01855 PF09285 Elongation factor P, C-terminal SLY_RS01865 PF13277 YmdB-like protein SLY_RS01870 PF12072 Domain of unknown function (DUF3552) SLY_RS01870 PF01966 HD domain SLY_RS01870 PF00013 KH domain SLY_RS01880 PF02646 RmuC family SLY_RS01895 PF01134 Glucose inhibited division protein A SLY_RS01895 PF13932 GidA associated domain SLY_RS01900 PF02527 rRNA small subunit methyltransferase G SLY_RS01905 PF17862 AAA+ lid domain SLY_RS01905 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS01905 PF01434 Peptidase family M41 SLY_RS01915 PF04539 Sigma-70 region 3 SLY_RS01915 PF04542 Sigma-70 region 2 SLY_RS01915 PF04545 Sigma-70, region 4 SLY_RS01915 PF00140 Sigma-70 factor, region 1.2 SLY_RS01915 PF03979 Sigma-70 factor, region 1.1 SLY_RS01930 PF00772 DnaB-like helicase N terminal domain SLY_RS01930 PF03796 DnaB-like helicase C terminal domain SLY_RS01940 PF02223 Thymidylate kinase SLY_RS01945 PF13333 Integrase core domain SLY_RS01945 PF00665 Integrase core domain SLY_RS01945 PF13276 HTH-like domain SLY_RS01950 PF03144 Elongation factor Tu domain 2 SLY_RS01950 PF00009 Elongation factor Tu GTP binding domain SLY_RS01950 PF03143 Elongation factor Tu C-terminal domain SLY_RS01955 PF03144 Elongation factor Tu domain 2 SLY_RS01955 PF00009 Elongation factor Tu GTP binding domain SLY_RS01955 PF03764 Elongation factor G, domain IV SLY_RS01955 PF14492 Elongation Factor G, domain II SLY_RS01955 PF00679 Elongation factor G C-terminus SLY_RS01960 PF00177 Ribosomal protein S7p/S5e SLY_RS01965 PF00164 Ribosomal protein S12/S23 SLY_RS01970 PF04998 RNA polymerase Rpb1, domain 5 SLY_RS01970 PF05000 RNA polymerase Rpb1, domain 4 SLY_RS01970 PF04983 RNA polymerase Rpb1, domain 3 SLY_RS01970 PF04997 RNA polymerase Rpb1, domain 1 SLY_RS01970 PF00623 RNA polymerase Rpb1, domain 2 SLY_RS01975 PF00562 RNA polymerase Rpb2, domain 6 SLY_RS01975 PF04560 RNA polymerase Rpb2, domain 7 SLY_RS01975 PF04565 RNA polymerase Rpb2, domain 3 SLY_RS01975 PF04561 RNA polymerase Rpb2, domain 2 SLY_RS01975 PF04563 RNA polymerase beta subunit SLY_RS01975 PF10385 RNA polymerase beta subunit external 1 domain SLY_RS01980 PF16320 Ribosomal protein L7/L12 dimerisation domain SLY_RS01980 PF00542 Ribosomal protein L7/L12 C-terminal domain SLY_RS01985 PF00466 Ribosomal protein L10 SLY_RS01990 PF00687 Ribosomal protein L1p/L10e family SLY_RS01995 PF00298 Ribosomal protein L11, RNA binding domain SLY_RS01995 PF03946 Ribosomal protein L11, N-terminal domain SLY_RS02000 PF02357 Transcription termination factor nusG SLY_RS02000 PF00467 KOW motif SLY_RS02010 PF08032 RNA 2'-O ribose methyltransferase substrate binding SLY_RS02010 PF00588 SpoU rRNA Methylase family SLY_RS02020 PF01138 3' exoribonuclease family, domain 1 SLY_RS02020 PF00013 KH domain SLY_RS02020 PF03725 3' exoribonuclease family, domain 2 SLY_RS02055 PF02096 60Kd inner membrane protein SLY_RS02060 PF00825 Ribonuclease P SLY_RS02065 PF00468 Ribosomal protein L34 SLY_RS02070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SLY_RS02070 PF09180 Prolyl-tRNA synthetase, C-terminal SLY_RS02070 PF03129 Anticodon binding domain SLY_RS02085 PF00557 Metallopeptidase family M24 SLY_RS02085 PF05195 Aminopeptidase P, N-terminal domain SLY_RS02090 PF00471 Ribosomal protein L33 SLY_RS02105 PF00216 Bacterial DNA-binding protein SLY_RS02110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SLY_RS02110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SLY_RS02115 PF03796 DnaB-like helicase C terminal domain SLY_RS02115 PF00772 DnaB-like helicase N terminal domain SLY_RS02125 PF01555 DNA methylase SLY_RS02130 PF00676 Dehydrogenase E1 component SLY_RS02135 PF02779 Transketolase, pyrimidine binding domain SLY_RS02135 PF02780 Transketolase, C-terminal domain SLY_RS02140 PF00364 Biotin-requiring enzyme SLY_RS02140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SLY_RS02140 PF02817 e3 binding domain SLY_RS02145 PF07992 Pyridine nucleotide-disulphide oxidoreductase SLY_RS02155 PF01026 TatD related DNase SLY_RS02175 PF00580 UvrD/REP helicase N-terminal domain SLY_RS02175 PF13361 UvrD-like helicase C-terminal domain SLY_RS02180 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SLY_RS02180 PF00749 tRNA synthetases class I (E and Q), catalytic domain SLY_RS02200 PF17760 UvrA interaction domain SLY_RS02200 PF17755 UvrA DNA-binding domain SLY_RS02200 PF00005 ABC transporter SLY_RS02205 PF05697 Bacterial trigger factor protein (TF) SLY_RS02205 PF05698 Bacterial trigger factor protein (TF) C-terminus SLY_RS02205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SLY_RS02210 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS02210 PF02190 ATP-dependent protease La (LON) substrate-binding domain SLY_RS02210 PF05362 Lon protease (S16) C-terminal proteolytic domain SLY_RS02220 PF01523 Putative modulator of DNA gyrase SLY_RS02230 PF01230 HIT domain SLY_RS02240 PF01351 Ribonuclease HII SLY_RS02250 PF01336 OB-fold nucleic acid binding domain SLY_RS02250 PF01966 HD domain SLY_RS02255 PF01743 Poly A polymerase head domain SLY_RS02255 PF12627 Probable RNA and SrmB- binding site of polymerase A SLY_RS02255 PF13735 tRNA nucleotidyltransferase domain 2 putative SLY_RS02260 PF14437 MafB19-like deaminase SLY_RS02265 PF00265 Thymidine kinase SLY_RS02270 PF01197 Ribosomal protein L31 SLY_RS02275 PF00830 Ribosomal L28 family SLY_RS02285 PF00011 Hsp20/alpha crystallin family SLY_RS02290 PF00005 ABC transporter SLY_RS02290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SLY_RS02295 PF13276 HTH-like domain SLY_RS02295 PF13333 Integrase core domain SLY_RS02295 PF00665 Integrase core domain SLY_RS02350 PF17862 AAA+ lid domain SLY_RS02350 PF01434 Peptidase family M41 SLY_RS02350 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS02350 PF06480 FtsH Extracellular SLY_RS02355 PF00772 DnaB-like helicase N terminal domain SLY_RS02355 PF03796 DnaB-like helicase C terminal domain SLY_RS02365 PF00772 DnaB-like helicase N terminal domain SLY_RS02365 PF03796 DnaB-like helicase C terminal domain SLY_RS02365 PF14528 LAGLIDADG-like domain SLY_RS02385 PF04545 Sigma-70, region 4 SLY_RS02385 PF04539 Sigma-70 region 3 SLY_RS02385 PF04542 Sigma-70 region 2 SLY_RS02385 PF03979 Sigma-70 factor, region 1.1 SLY_RS02385 PF00140 Sigma-70 factor, region 1.2 SLY_RS02400 PF00145 C-5 cytosine-specific DNA methylase SLY_RS02420 PF03796 DnaB-like helicase C terminal domain SLY_RS02420 PF00772 DnaB-like helicase N terminal domain SLY_RS02430 PF02223 Thymidylate kinase SLY_RS02445 PF02086 D12 class N6 adenine-specific DNA methyltransferase SLY_RS02455 PF13274 Protein of unknown function (DUF4065) SLY_RS02490 PF17862 AAA+ lid domain SLY_RS02490 PF01434 Peptidase family M41 SLY_RS02490 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS02535 PF13276 HTH-like domain SLY_RS02535 PF00665 Integrase core domain SLY_RS02535 PF13333 Integrase core domain SLY_RS02590 PF06480 FtsH Extracellular SLY_RS02590 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS02590 PF17862 AAA+ lid domain SLY_RS02590 PF01434 Peptidase family M41 SLY_RS02630 PF00216 Bacterial DNA-binding protein SLY_RS02650 PF02223 Thymidylate kinase SLY_RS02660 PF03796 DnaB-like helicase C terminal domain SLY_RS02660 PF00772 DnaB-like helicase N terminal domain SLY_RS02670 PF00145 C-5 cytosine-specific DNA methylase SLY_RS02695 PF00665 Integrase core domain SLY_RS02695 PF13276 HTH-like domain SLY_RS02695 PF13333 Integrase core domain SLY_RS02705 PF02223 Thymidylate kinase SLY_RS02715 PF00772 DnaB-like helicase N terminal domain SLY_RS02715 PF03796 DnaB-like helicase C terminal domain SLY_RS02735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SLY_RS02735 PF00005 ABC transporter SLY_RS02740 PF00005 ABC transporter SLY_RS02740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SLY_RS02755 PF00528 Binding-protein-dependent transport system inner membrane component SLY_RS02760 PF12911 N-terminal TM domain of oligopeptide transport permease C SLY_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component SLY_RS02765 PF00166 Chaperonin 10 Kd subunit SLY_RS02770 PF00118 TCP-1/cpn60 chaperonin family SLY_RS02790 PF13291 ACT domain SLY_RS02790 PF04607 Region found in RelA / SpoT proteins SLY_RS02790 PF02824 TGS domain SLY_RS02795 PF03390 2-hydroxycarboxylate transporter family SLY_RS02800 PF03949 Malic enzyme, NAD binding domain SLY_RS02800 PF00390 Malic enzyme, N-terminal domain SLY_RS02805 PF12826 Helix-hairpin-helix motif SLY_RS02805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SLY_RS02805 PF03120 NAD-dependent DNA ligase OB-fold domain SLY_RS02805 PF01653 NAD-dependent DNA ligase adenylation domain SLY_RS02805 PF00533 BRCA1 C Terminus (BRCT) domain SLY_RS02810 PF14527 WhiA LAGLIDADG-like domain SLY_RS02810 PF02650 WhiA C-terminal HTH domain SLY_RS02810 PF10298 WhiA N-terminal LAGLIDADG-like domain SLY_RS02825 PF04539 Sigma-70 region 3 SLY_RS02825 PF04545 Sigma-70, region 4 SLY_RS02825 PF04542 Sigma-70 region 2 SLY_RS02825 PF00140 Sigma-70 factor, region 1.2 SLY_RS02825 PF03979 Sigma-70 factor, region 1.1 SLY_RS02840 PF00145 C-5 cytosine-specific DNA methylase SLY_RS02850 PF00772 DnaB-like helicase N terminal domain SLY_RS02850 PF03796 DnaB-like helicase C terminal domain SLY_RS02860 PF02223 Thymidylate kinase SLY_RS02880 PF13274 Protein of unknown function (DUF4065) SLY_RS02895 PF00216 Bacterial DNA-binding protein SLY_RS02935 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS02935 PF06480 FtsH Extracellular SLY_RS02935 PF17862 AAA+ lid domain SLY_RS02935 PF01434 Peptidase family M41 SLY_RS02950 PF13274 Protein of unknown function (DUF4065) SLY_RS02965 PF13333 Integrase core domain SLY_RS02965 PF13276 HTH-like domain SLY_RS02965 PF00665 Integrase core domain SLY_RS02970 PF03796 DnaB-like helicase C terminal domain SLY_RS02970 PF00772 DnaB-like helicase N terminal domain SLY_RS02990 PF01434 Peptidase family M41 SLY_RS02990 PF06480 FtsH Extracellular SLY_RS02990 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS02990 PF17862 AAA+ lid domain SLY_RS03025 PF00216 Bacterial DNA-binding protein SLY_RS03045 PF02223 Thymidylate kinase SLY_RS03055 PF03796 DnaB-like helicase C terminal domain SLY_RS03055 PF00772 DnaB-like helicase N terminal domain SLY_RS03070 PF00464 Serine hydroxymethyltransferase SLY_RS03075 PF02361 Cobalt transport protein SLY_RS03080 PF00005 ABC transporter SLY_RS03085 PF00005 ABC transporter SLY_RS03105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SLY_RS03105 PF01348 Type II intron maturase SLY_RS03110 PF00204 DNA gyrase B SLY_RS03110 PF01751 Toprim domain SLY_RS03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SLY_RS03110 PF00986 DNA gyrase B subunit, carboxyl terminus SLY_RS03115 PF03989 DNA gyrase C-terminal domain, beta-propeller SLY_RS03115 PF00521 DNA gyrase/topoisomerase IV, subunit A SLY_RS03120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SLY_RS03125 PF00583 Acetyltransferase (GNAT) family SLY_RS03125 PF00814 Glycoprotease family SLY_RS03150 PF00128 Alpha amylase, catalytic domain SLY_RS03155 PF00679 Elongation factor G C-terminus SLY_RS03155 PF03144 Elongation factor Tu domain 2 SLY_RS03155 PF06421 GTP-binding protein LepA C-terminus SLY_RS03155 PF00009 Elongation factor Tu GTP binding domain SLY_RS03175 PF13276 HTH-like domain SLY_RS03175 PF13333 Integrase core domain SLY_RS03175 PF00665 Integrase core domain SLY_RS03190 PF00665 Integrase core domain SLY_RS03190 PF13333 Integrase core domain SLY_RS03190 PF13276 HTH-like domain SLY_RS03210 PF01434 Peptidase family M41 SLY_RS03210 PF06480 FtsH Extracellular SLY_RS03210 PF17862 AAA+ lid domain SLY_RS03210 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS03250 PF00216 Bacterial DNA-binding protein SLY_RS03265 PF02223 Thymidylate kinase SLY_RS03275 PF03796 DnaB-like helicase C terminal domain SLY_RS03275 PF00772 DnaB-like helicase N terminal domain SLY_RS03290 PF00707 Translation initiation factor IF-3, C-terminal domain SLY_RS03290 PF05198 Translation initiation factor IF-3, N-terminal domain SLY_RS03295 PF01632 Ribosomal protein L35 SLY_RS03300 PF00453 Ribosomal protein L20 SLY_RS03300 PF07498 Rho termination factor, N-terminal domain SLY_RS03310 PF00550 Phosphopantetheine attachment site SLY_RS03320 PF09334 tRNA synthetases class I (M) SLY_RS03320 PF08264 Anticodon-binding domain of tRNA SLY_RS03320 PF13603 Leucyl-tRNA synthetase, Domain 2 SLY_RS03325 PF00625 Guanylate kinase SLY_RS03330 PF01192 RNA polymerase Rpb6 SLY_RS03335 PF01795 MraW methylase family SLY_RS03360 PF00268 Ribonucleotide reductase, small chain SLY_RS03365 PF01741 Large-conductance mechanosensitive channel, MscL SLY_RS03370 PF00664 ABC transporter transmembrane region SLY_RS03370 PF00005 ABC transporter SLY_RS03375 PF00664 ABC transporter transmembrane region SLY_RS03375 PF00005 ABC transporter SLY_RS03380 PF13333 Integrase core domain SLY_RS03380 PF00665 Integrase core domain SLY_RS03395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SLY_RS03395 PF01348 Type II intron maturase SLY_RS03415 PF17862 AAA+ lid domain SLY_RS03415 PF01434 Peptidase family M41 SLY_RS03415 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS03445 PF00216 Bacterial DNA-binding protein SLY_RS03480 PF02223 Thymidylate kinase SLY_RS03490 PF03796 DnaB-like helicase C terminal domain SLY_RS03490 PF00772 DnaB-like helicase N terminal domain SLY_RS03510 PF03006 Haemolysin-III related SLY_RS03515 PF00871 Acetokinase family SLY_RS03530 PF00271 Helicase conserved C-terminal domain SLY_RS03530 PF17764 3′ DNA-binding domain (3′BD) SLY_RS03530 PF18074 Primosomal protein N C-terminal domain SLY_RS03530 PF04851 Type III restriction enzyme, res subunit SLY_RS03530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SLY_RS03550 PF13333 Integrase core domain SLY_RS03550 PF00665 Integrase core domain SLY_RS03550 PF13276 HTH-like domain SLY_RS03555 PF00665 Integrase core domain SLY_RS03555 PF13333 Integrase core domain SLY_RS03570 PF02223 Thymidylate kinase SLY_RS03580 PF00772 DnaB-like helicase N terminal domain SLY_RS03580 PF03796 DnaB-like helicase C terminal domain SLY_RS03595 PF04545 Sigma-70, region 4 SLY_RS03595 PF04539 Sigma-70 region 3 SLY_RS03595 PF04542 Sigma-70 region 2 SLY_RS03595 PF00140 Sigma-70 factor, region 1.2 SLY_RS03595 PF03979 Sigma-70 factor, region 1.1 SLY_RS03600 PF09334 tRNA synthetases class I (M) SLY_RS03600 PF01588 Putative tRNA binding domain SLY_RS03605 PF00883 Cytosol aminopeptidase family, catalytic domain SLY_RS03605 PF02789 Cytosol aminopeptidase family, N-terminal domain SLY_RS03620 PF13416 Bacterial extracellular solute-binding protein SLY_RS03625 PF00528 Binding-protein-dependent transport system inner membrane component SLY_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component SLY_RS03635 PF08402 TOBE domain SLY_RS03635 PF00005 ABC transporter SLY_RS03640 PF06480 FtsH Extracellular SLY_RS03640 PF17862 AAA+ lid domain SLY_RS03640 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS03640 PF01434 Peptidase family M41 SLY_RS03645 PF13180 PDZ domain SLY_RS03650 PF02361 Cobalt transport protein SLY_RS03655 PF12558 ATP-binding cassette cobalt transporter SLY_RS03655 PF00005 ABC transporter SLY_RS03660 PF07155 ECF-type riboflavin transporter, S component SLY_RS03665 PF08264 Anticodon-binding domain of tRNA SLY_RS03665 PF00133 tRNA synthetases class I (I, L, M and V) SLY_RS03670 PF01926 50S ribosome-binding GTPase SLY_RS03685 PF03481 Putative GTP-binding controlling metal-binding SLY_RS03685 PF01300 Telomere recombination SLY_RS03690 PF00472 RF-1 domain SLY_RS03690 PF03462 PCRF domain SLY_RS03695 PF00772 DnaB-like helicase N terminal domain SLY_RS03695 PF03796 DnaB-like helicase C terminal domain SLY_RS03700 PF03948 Ribosomal protein L9, C-terminal domain SLY_RS03700 PF02272 DHHA1 domain SLY_RS03700 PF01281 Ribosomal protein L9, N-terminal domain SLY_RS03700 PF01368 DHH family SLY_RS03705 PF01084 Ribosomal protein S18 SLY_RS03710 PF00436 Single-strand binding protein family SLY_RS03715 PF01250 Ribosomal protein S6 SLY_RS03735 PF00665 Integrase core domain SLY_RS03735 PF13333 Integrase core domain SLY_RS03735 PF13276 HTH-like domain SLY_RS03745 PF00270 DEAD/DEAH box helicase SLY_RS03745 PF00271 Helicase conserved C-terminal domain SLY_RS03780 PF00365 Phosphofructokinase SLY_RS03790 PF00342 Phosphoglucose isomerase SLY_RS03795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SLY_RS03805 PF02223 Thymidylate kinase SLY_RS03810 PF01416 tRNA pseudouridine synthase SLY_RS03820 PF13276 HTH-like domain SLY_RS03820 PF13333 Integrase core domain SLY_RS03820 PF00665 Integrase core domain SLY_RS03840 PF00665 Integrase core domain SLY_RS03840 PF13333 Integrase core domain SLY_RS03865 PF01434 Peptidase family M41 SLY_RS03865 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS03865 PF17862 AAA+ lid domain SLY_RS03895 PF00216 Bacterial DNA-binding protein SLY_RS03925 PF02223 Thymidylate kinase SLY_RS03935 PF03796 DnaB-like helicase C terminal domain SLY_RS03935 PF00772 DnaB-like helicase N terminal domain SLY_RS03955 PF00145 C-5 cytosine-specific DNA methylase SLY_RS03965 PF03796 DnaB-like helicase C terminal domain SLY_RS03965 PF00772 DnaB-like helicase N terminal domain SLY_RS03975 PF02223 Thymidylate kinase SLY_RS03995 PF13274 Protein of unknown function (DUF4065) SLY_RS04010 PF00216 Bacterial DNA-binding protein SLY_RS04050 PF06480 FtsH Extracellular SLY_RS04050 PF17862 AAA+ lid domain SLY_RS04050 PF01434 Peptidase family M41 SLY_RS04050 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS04070 PF13274 Protein of unknown function (DUF4065) SLY_RS04085 PF04542 Sigma-70 region 2 SLY_RS04085 PF08281 Sigma-70, region 4 SLY_RS04095 PF03796 DnaB-like helicase C terminal domain SLY_RS04095 PF00772 DnaB-like helicase N terminal domain SLY_RS04105 PF02223 Thymidylate kinase SLY_RS04185 PF01434 Peptidase family M41 SLY_RS04185 PF06480 FtsH Extracellular SLY_RS04185 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS04185 PF17862 AAA+ lid domain SLY_RS04215 PF13333 Integrase core domain SLY_RS04215 PF00665 Integrase core domain SLY_RS04215 PF13276 HTH-like domain SLY_RS04230 PF00005 ABC transporter SLY_RS04235 PF00293 NUDIX domain SLY_RS04250 PF00689 Cation transporting ATPase, C-terminus SLY_RS04250 PF00690 Cation transporter/ATPase, N-terminus SLY_RS04255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SLY_RS04255 PF01926 50S ribosome-binding GTPase SLY_RS04260 PF02224 Cytidylate kinase SLY_RS04265 PF01479 S4 domain SLY_RS04265 PF00849 RNA pseudouridylate synthase SLY_RS04270 PF01509 TruB family pseudouridylate synthase (N terminal domain) SLY_RS04275 PF00085 Thioredoxin SLY_RS04295 PF03796 DnaB-like helicase C terminal domain SLY_RS04295 PF00772 DnaB-like helicase N terminal domain SLY_RS04305 PF02223 Thymidylate kinase SLY_RS04330 PF00436 Single-strand binding protein family SLY_RS04340 PF00436 Single-strand binding protein family SLY_RS04380 PF01066 CDP-alcohol phosphatidyltransferase SLY_RS04420 PF02734 DAK2 domain SLY_RS04420 PF13684 Dihydroxyacetone kinase family SLY_RS04440 PF00313 'Cold-shock' DNA-binding domain SLY_RS04445 PF07319 Primosomal protein DnaI N-terminus SLY_RS04445 PF01695 IstB-like ATP binding protein SLY_RS04455 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SLY_RS04455 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SLY_RS04455 PF06827 Zinc finger found in FPG and IleRS SLY_RS04460 PF00476 DNA polymerase family A SLY_RS04460 PF01367 5'-3' exonuclease, C-terminal SAM fold SLY_RS04460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SLY_RS04465 PF02978 Signal peptide binding domain SLY_RS04465 PF00448 SRP54-type protein, GTPase domain SLY_RS04465 PF02881 SRP54-type protein, helical bundle domain SLY_RS04470 PF02978 Signal peptide binding domain SLY_RS04470 PF02881 SRP54-type protein, helical bundle domain SLY_RS04470 PF00448 SRP54-type protein, GTPase domain SLY_RS04475 PF00448 SRP54-type protein, GTPase domain SLY_RS04475 PF02881 SRP54-type protein, helical bundle domain SLY_RS04500 PF00772 DnaB-like helicase N terminal domain SLY_RS04500 PF03796 DnaB-like helicase C terminal domain SLY_RS04510 PF02223 Thymidylate kinase SLY_RS04530 PF03796 DnaB-like helicase C terminal domain SLY_RS04530 PF00772 DnaB-like helicase N terminal domain SLY_RS04540 PF02223 Thymidylate kinase SLY_RS04545 PF00772 DnaB-like helicase N terminal domain SLY_RS04545 PF03796 DnaB-like helicase C terminal domain SLY_RS04555 PF02223 Thymidylate kinase SLY_RS04615 PF17862 AAA+ lid domain SLY_RS04615 PF01434 Peptidase family M41 SLY_RS04615 PF06480 FtsH Extracellular SLY_RS04615 PF00004 ATPase family associated with various cellular activities (AAA) SLY_RS04640 PF13333 Integrase core domain SLY_RS04640 PF00665 Integrase core domain SLY_RS04645 PF00665 Integrase core domain SLY_RS04645 PF13333 Integrase core domain SLY_RS04645 PF13276 HTH-like domain SLY_RS04755 PF01029 NusB family SLY_RS04760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SLY_RS04760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SLY_RS04765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SLY_RS04765 PF07992 Pyridine nucleotide-disulphide oxidoreductase SLY_RS04770 PF01648 4'-phosphopantetheinyl transferase superfamily SLY_RS04780 PF00528 Binding-protein-dependent transport system inner membrane component