CEP89_RS00010	SM00028	Tetratricopeptide repeats
CEP89_RS00040	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEP89_RS00055	SM00954	Region found in RelA / SpoT proteins
CEP89_RS00065	SM00981	CEP89_RS00065
CEP89_RS00085	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00165	SM01091	Transporter associated domain
CEP89_RS00195	SM00411	bacterial (prokaryotic) histone like domain
CEP89_RS00235	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEP89_RS00260	SM00358	Double-stranded RNA binding motif
CEP89_RS00260	SM00535	Ribonuclease III family
CEP89_RS00270	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00325	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00325	SM00994	ClpX C4-type zinc finger
CEP89_RS00325	SM01086	C-terminal, D2-small domain, of ClpB protein
CEP89_RS00330	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00330	SM00464	Found in ATP-dependent protease La (LON)
CEP89_RS00335	SM00904	Riboflavin kinase
CEP89_RS00375	SM00838	Elongation factor G C-terminus
CEP89_RS00380	SM00479	CEP89_RS00380
CEP89_RS00390	SM01230	CEP89_RS00390
CEP89_RS00425	SM00363	S4 RNA-binding domain
CEP89_RS00440	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00450	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00460	SM00448	cheY-homologous receiver domain
CEP89_RS00460	SM00862	Transcriptional regulatory protein, C terminal
CEP89_RS00465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEP89_RS00465	SM00387	Histidine kinase-like ATPases
CEP89_RS00465	SM00388	His Kinase A (phosphoacceptor) domain
CEP89_RS00510	SM00244	prohibitin homologues
CEP89_RS00525	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEP89_RS00525	SM00924	MgtE intracellular N domain
CEP89_RS00535	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00570	SM00478	endonuclease III
CEP89_RS00575	SM01323	CEP89_RS00575
CEP89_RS00580	SM00646	CEP89_RS00580
CEP89_RS00590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEP89_RS00595	SM00955	CEP89_RS00595
CEP89_RS00620	SM00487	DEAD-like helicases superfamily
CEP89_RS00620	SM00490	helicase superfamily c-terminal domain
CEP89_RS00635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEP89_RS00635	SM00245	tail specific protease
CEP89_RS00640	SM00363	S4 RNA-binding domain
CEP89_RS00650	SM01103	CEP89_RS00650
CEP89_RS00675	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00760	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00775	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00780	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS00810	SM00354	helix_turn _helix lactose operon repressor
CEP89_RS00845	SM00487	DEAD-like helicases superfamily
CEP89_RS00845	SM00490	helicase superfamily c-terminal domain
CEP89_RS00860	SM00487	DEAD-like helicases superfamily
CEP89_RS00900	SM01252	CEP89_RS00900
CEP89_RS00965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEP89_RS00985	SM00840	CEP89_RS00985
CEP89_RS00990	SM00463	Small MutS-related domain
CEP89_RS00990	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CEP89_RS00990	SM00534	ATPase domain of DNA mismatch repair MUTS family
CEP89_RS01000	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01005	SM00977	TilS substrate C-terminal domain
CEP89_RS01035	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01035	SM00930	CEP89_RS01035
CEP89_RS01045	SM00957	SecA DEAD-like domain
CEP89_RS01045	SM00958	SecA preprotein cross-linking domain
CEP89_RS01085	SM00937	CEP89_RS01085
CEP89_RS01115	SM00220	Serine/Threonine protein kinases, catalytic domain
CEP89_RS01170	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01175	SM00062	Bacterial periplasmic substrate-binding proteins
CEP89_RS01240	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS01270	SM00480	DNA polymerase III beta subunit
CEP89_RS01285	SM01207	CEP89_RS01285
CEP89_RS01295	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01320	SM00346	helix_turn_helix isocitrate lyase regulation
CEP89_RS01365	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01370	SM00829	Enoylreductase
CEP89_RS01510	SM01387	CEP89_RS01510
CEP89_RS01515	SM01131	CEP89_RS01515
CEP89_RS01520	SM00014	Acid phosphatase homologues
CEP89_RS01530	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEP89_RS01535	SM00487	DEAD-like helicases superfamily
CEP89_RS01535	SM00488	CEP89_RS01535
CEP89_RS01535	SM00491	CEP89_RS01535
CEP89_RS01570	SM00649	Ribosomal protein L11/L12
CEP89_RS01575	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CEP89_RS01595	SM00493	CEP89_RS01595
CEP89_RS01615	SM00650	Ribosomal RNA adenine dimethylases
CEP89_RS01635	SM01133	CEP89_RS01635
CEP89_RS01640	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CEP89_RS01660	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01665	SM00465	GIY-YIG type nucleases (URI domain)
CEP89_RS01680	SM00478	endonuclease III
CEP89_RS01745	SM00400	zinc finger
CEP89_RS01745	SM00493	CEP89_RS01745
CEP89_RS01750	SM01409	CEP89_RS01750
CEP89_RS01755	SM00072	Guanylate kinase homologues.
CEP89_RS01760	SM00663	RNA polymerase I subunit A N-terminus
CEP89_RS01800	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01865	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01870	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01895	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01920	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS01925	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS01940	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS01960	SM00245	tail specific protease
CEP89_RS01965	SM00849	Metallo-beta-lactamase superfamily
CEP89_RS01990	SM00849	Metallo-beta-lactamase superfamily
CEP89_RS02005	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEP89_RS02005	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEP89_RS02005	SM00493	CEP89_RS02005
CEP89_RS02015	SM00028	Tetratricopeptide repeats
CEP89_RS02050	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02075	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02095	SM00642	Alpha-amylase domain
CEP89_RS02105	SM00354	helix_turn _helix lactose operon repressor
CEP89_RS02110	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CEP89_RS02115	SM00732	Likely ribonuclease with RNase H fold.
CEP89_RS02130	SM00493	CEP89_RS02130
CEP89_RS02200	SM00831	Cation transporter/ATPase, N-terminus
CEP89_RS02210	SM00316	Ribosomal protein S1-like RNA-binding domain
CEP89_RS02210	SM00322	K homology RNA-binding domain
CEP89_RS02240	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CEP89_RS02250	SM00028	Tetratricopeptide repeats
CEP89_RS02275	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02320	SM01091	Transporter associated domain
CEP89_RS02330	SM00881	CoA binding domain
CEP89_RS02345	SM00487	DEAD-like helicases superfamily
CEP89_RS02345	SM00490	helicase superfamily c-terminal domain
CEP89_RS02355	SM00845	GatB domain
CEP89_RS02375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEP89_RS02380	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02435	SM00479	CEP89_RS02435
CEP89_RS02440	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02455	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CEP89_RS02460	SM00342	helix_turn_helix, arabinose operon control protein
CEP89_RS02490	SM00662	RNA polymerases D
CEP89_RS02495	SM00363	S4 RNA-binding domain
CEP89_RS02495	SM01390	CEP89_RS02495
CEP89_RS02515	SM00316	Ribosomal protein S1-like RNA-binding domain
CEP89_RS02530	SM00836	DALR anticodon binding domain
CEP89_RS02530	SM01016	Arginyl tRNA synthetase N terminal dom
CEP89_RS02535	SM00479	CEP89_RS02535
CEP89_RS02535	SM00481	DNA polymerase alpha chain like domain
CEP89_RS02540	SM00998	Adenylosuccinate lyase C-terminus
CEP89_RS02545	SM00788	Adenylosuccinate synthetase
CEP89_RS02605	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02665	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02695	SM00890	Domain of unknown function
CEP89_RS02785	SM00912	haemagglutination activity domain
CEP89_RS02800	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02815	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02905	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS02920	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03155	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03175	SM00028	Tetratricopeptide repeats
CEP89_RS03180	SM01321	CEP89_RS03180
CEP89_RS03235	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03250	SM00869	Autotransporter beta-domain
CEP89_RS03310	SM01403	CEP89_RS03310
CEP89_RS03320	SM00838	Elongation factor G C-terminus
CEP89_RS03320	SM00889	Elongation factor G, domain IV
CEP89_RS03450	SM00448	cheY-homologous receiver domain
CEP89_RS03530	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEP89_RS03535	SM01133	CEP89_RS03535
CEP89_RS03550	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03575	SM00873	B3/4 domain
CEP89_RS03630	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03660	SM00354	helix_turn _helix lactose operon repressor
CEP89_RS03690	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEP89_RS03690	SM01134	CEP89_RS03690
CEP89_RS03740	SM00864	Tubulin/FtsZ family, GTPase domain
CEP89_RS03740	SM00865	Tubulin/FtsZ family, C-terminal domain
CEP89_RS03755	SM00393	Putative single-stranded nucleic acids-binding domain
CEP89_RS03765	SM01234	CEP89_RS03765
CEP89_RS03905	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03915	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03920	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS03960	SM00642	Alpha-amylase domain
CEP89_RS03975	SM01209	CEP89_RS03975
CEP89_RS03975	SM01210	CEP89_RS03975
CEP89_RS03980	SM00798	AICARFT/IMPCHase bienzyme
CEP89_RS03980	SM00851	MGS-like domain
CEP89_RS04010	SM01001	AIR carboxylase
CEP89_RS04015	SM01211	CEP89_RS04015
CEP89_RS04025	SM00487	DEAD-like helicases superfamily
CEP89_RS04025	SM00490	helicase superfamily c-terminal domain
CEP89_RS04025	SM00982	CEP89_RS04025
CEP89_RS04025	SM01058	CarD-like/TRCF domain
CEP89_RS04120	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04125	SM00641	Glycosyl hydrolases family 25
CEP89_RS04150	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEP89_RS04160	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04195	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CEP89_RS04195	SM00534	ATPase domain of DNA mismatch repair MUTS family
CEP89_RS04205	SM00912	haemagglutination activity domain
CEP89_RS04230	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04230	SM00760	Bacterial dnaA protein helix-turn-helix domain
CEP89_RS04285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEP89_RS04285	SM00387	Histidine kinase-like ATPases
CEP89_RS04285	SM00388	His Kinase A (phosphoacceptor) domain
CEP89_RS04290	SM00448	cheY-homologous receiver domain
CEP89_RS04290	SM00862	Transcriptional regulatory protein, C terminal
CEP89_RS04365	SM00481	DNA polymerase alpha chain like domain
CEP89_RS04390	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04395	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04470	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04470	SM00962	SRP54-type protein, GTPase domain
CEP89_RS04470	SM00963	SRP54-type protein, helical bundle domain
CEP89_RS04475	SM00563	Phosphate acyltransferases
CEP89_RS04480	SM00563	Phosphate acyltransferases
CEP89_RS04510	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04525	SM01400	CEP89_RS04525
CEP89_RS04590	SM01120	CEP89_RS04590
CEP89_RS04590	SM01121	CEP89_RS04590
CEP89_RS04595	SM00316	Ribosomal protein S1-like RNA-binding domain
CEP89_RS04625	SM00331	Sigma factor PP2C-like phosphatases
CEP89_RS04655	SM00487	DEAD-like helicases superfamily
CEP89_RS04680	SM00155	Phospholipase D. Active site motifs.
CEP89_RS04705	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEP89_RS04745	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04750	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04770	SM00642	Alpha-amylase domain
CEP89_RS04795	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04810	SM00421	helix_turn_helix, Lux Regulon
CEP89_RS04810	SM00448	cheY-homologous receiver domain
CEP89_RS04825	SM00861	Transketolase, pyrimidine binding domain
CEP89_RS04870	SM00855	Phosphoglycerate mutase family
CEP89_RS04875	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04875	SM00843	CEP89_RS04875
CEP89_RS04890	SM00363	S4 RNA-binding domain
CEP89_RS04915	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS04915	SM01086	C-terminal, D2-small domain, of ClpB protein
CEP89_RS04940	SM00271	DnaJ molecular chaperone homology domain
CEP89_RS04950	SM01061	CAT RNA binding domain
CEP89_RS05010	SM00642	Alpha-amylase domain
CEP89_RS05045	SM00642	Alpha-amylase domain
CEP89_RS05070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEP89_RS05070	SM00866	CEP89_RS05070
CEP89_RS05145	SM01007	Class II Aldolase and Adducin N-terminal domain
CEP89_RS05150	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS05210	SM00354	helix_turn _helix lactose operon repressor
CEP89_RS05230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEP89_RS05350	SM01382	CEP89_RS05350
CEP89_RS05350	SM01383	CEP89_RS05350
CEP89_RS05365	SM00322	K homology RNA-binding domain
CEP89_RS05385	SM01374	CEP89_RS05385
CEP89_RS05440	SM00363	S4 RNA-binding domain
CEP89_RS05450	SM00363	S4 RNA-binding domain
CEP89_RS05460	SM00387	Histidine kinase-like ATPases
CEP89_RS05460	SM00433	TopoisomeraseII
CEP89_RS05465	SM00434	DNA Topoisomerase IV
CEP89_RS05490	SM00873	B3/4 domain
CEP89_RS05490	SM00874	tRNA synthetase B5 domain
CEP89_RS05490	SM00896	Ferredoxin-fold anticodon binding domain
CEP89_RS05495	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CEP89_RS05620	SM00244	prohibitin homologues
CEP89_RS05640	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS05645	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS05670	SM00861	Transketolase, pyrimidine binding domain
CEP89_RS05705	SM00862	Transcriptional regulatory protein, C terminal
CEP89_RS05725	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEP89_RS05740	SM00740	CEP89_RS05740
CEP89_RS05800	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS05820	SM01040	BRO family, N-terminal domain
CEP89_RS06005	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEP89_RS06005	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEP89_RS06005	SM00493	CEP89_RS06005
CEP89_RS06040	SM00912	haemagglutination activity domain
CEP89_RS06095	SM00861	Transketolase, pyrimidine binding domain
CEP89_RS06100	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06115	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06155	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06190	SM01228	CEP89_RS06190
CEP89_RS06245	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06260	SM00487	DEAD-like helicases superfamily
CEP89_RS06260	SM00490	helicase superfamily c-terminal domain
CEP89_RS06310	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEP89_RS06320	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06325	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06335	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CEP89_RS06335	SM00475	5'-3' exonuclease
CEP89_RS06335	SM00482	DNA polymerase A domain
CEP89_RS06350	SM00363	S4 RNA-binding domain
CEP89_RS06365	SM00316	Ribosomal protein S1-like RNA-binding domain
CEP89_RS06365	SM00732	Likely ribonuclease with RNase H fold.
CEP89_RS06395	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06545	SM00855	Phosphoglycerate mutase family
CEP89_RS06605	SM01130	CEP89_RS06605
CEP89_RS06635	SM00853	MutL C terminal dimerisation domain
CEP89_RS06635	SM01340	CEP89_RS06635
CEP89_RS06715	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS06795	SM00838	Elongation factor G C-terminus
CEP89_RS06795	SM00889	Elongation factor G, domain IV
CEP89_RS06865	SM01130	CEP89_RS06865
CEP89_RS06875	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEP89_RS06880	SM00841	Elongation factor P, C-terminal
CEP89_RS06880	SM01185	CEP89_RS06880
CEP89_RS06885	SM00476	deoxyribonuclease I
CEP89_RS06895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEP89_RS06925	SM00028	Tetratricopeptide repeats
CEP89_RS06985	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS07020	SM01192	CEP89_RS07020
CEP89_RS07020	SM01193	CEP89_RS07020
CEP89_RS07100	SM01228	CEP89_RS07100
CEP89_RS07105	SM00849	Metallo-beta-lactamase superfamily
CEP89_RS07115	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEP89_RS07115	SM01240	CEP89_RS07115
CEP89_RS07120	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEP89_RS07120	SM00292	breast cancer carboxy-terminal domain
CEP89_RS07120	SM00532	Ligase N family
CEP89_RS07135	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS07140	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS07160	SM00028	Tetratricopeptide repeats
CEP89_RS07175	SM00322	K homology RNA-binding domain
CEP89_RS07175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEP89_RS07190	SM01005	Alanine racemase, C-terminal domain
CEP89_RS07210	SM00363	S4 RNA-binding domain
CEP89_RS07215	SM00357	Cold shock protein domain
CEP89_RS07230	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS07235	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS07250	SM00487	DEAD-like helicases superfamily
CEP89_RS07250	SM00490	helicase superfamily c-terminal domain
CEP89_RS07270	SM00968	SMC proteins Flexible Hinge Domain
CEP89_RS07305	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS07310	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS07335	SM01040	BRO family, N-terminal domain
CEP89_RS07425	SM00382	ATPases associated with a variety of cellular activities
CEP89_RS07515	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEP89_RS07515	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEP89_RS07515	SM00493	CEP89_RS07515
CEP89_RS07530	SM00530	Helix-turn-helix XRE-family like proteins 
CEP89_RS07615	SM00248	ankyrin repeats
CEP89_RS07640	SM00883	Chaperonin 10 Kd subunit
CEP89_RS07690	SM00382	ATPases associated with a variety of cellular activities
