locus-tag class description DX05_RS00005 PF00308 Bacterial dnaA protein DX05_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DX05_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DX05_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DX05_RS00010 PF02767 DNA polymerase III beta subunit, central domain DX05_RS00025 PF01381 Helix-turn-helix DX05_RS00035 PF06071 Protein of unknown function (DUF933) DX05_RS00035 PF01926 50S ribosome-binding GTPase DX05_RS00040 PF01195 Peptidyl-tRNA hydrolase DX05_RS00045 PF17757 UvrB interaction domain DX05_RS00045 PF00271 Helicase conserved C-terminal domain DX05_RS00045 PF00270 DEAD/DEAH box helicase DX05_RS00045 PF02559 CarD-like/TRCF domain DX05_RS00045 PF03461 TRCF domain DX05_RS00050 PF01479 S4 domain DX05_RS00070 PF01171 PP-loop family DX05_RS00075 PF00156 Phosphoribosyl transferase domain DX05_RS00080 PF06480 FtsH Extracellular DX05_RS00080 PF01434 Peptidase family M41 DX05_RS00080 PF00004 ATPase family associated with various cellular activities (AAA) DX05_RS00080 PF17862 AAA+ lid domain DX05_RS00260 PF14572 Phosphoribosyl synthetase-associated domain DX05_RS00260 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DX05_RS00265 PF00155 Aminotransferase class I and II DX05_RS00270 PF11967 Recombination protein O N terminal DX05_RS00270 PF02565 Recombination protein O C terminal DX05_RS00285 PF02504 Fatty acid synthesis protein DX05_RS00290 PF00550 Phosphopantetheine attachment site DX05_RS00295 PF01259 SAICAR synthetase DX05_RS00300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DX05_RS00300 PF00586 AIR synthase related protein, N-terminal domain DX05_RS00300 PF02769 AIR synthase related protein, C-terminal domain DX05_RS00310 PF13537 Glutamine amidotransferase domain DX05_RS00310 PF00156 Phosphoribosyl transferase domain DX05_RS00315 PF00586 AIR synthase related protein, N-terminal domain DX05_RS00315 PF02769 AIR synthase related protein, C-terminal domain DX05_RS00320 PF00551 Formyl transferase DX05_RS00330 PF02142 MGS-like domain DX05_RS00330 PF01808 AICARFT/IMPCHase bienzyme DX05_RS00335 PF01551 Peptidase family M23 DX05_RS00335 PF01476 LysM domain DX05_RS00345 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DX05_RS00355 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS00360 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS00375 PF00701 Dihydrodipicolinate synthetase family DX05_RS00380 PF00480 ROK family DX05_RS00385 PF05448 Acetyl xylan esterase (AXE1) DX05_RS00395 PF02843 Phosphoribosylglycinamide synthetase, C domain DX05_RS00395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DX05_RS00395 PF02844 Phosphoribosylglycinamide synthetase, N domain DX05_RS00400 PF00731 AIR carboxylase DX05_RS00405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DX05_RS00405 PF02222 ATP-grasp domain DX05_RS00430 PF10397 Adenylosuccinate lyase C-terminus DX05_RS00430 PF00206 Lyase DX05_RS00440 PF05491 RuvB C-terminal winged helix domain DX05_RS00440 PF17864 RuvB AAA lid domain DX05_RS00440 PF05496 Holliday junction DNA helicase RuvB P-loop domain DX05_RS00445 PF01451 Low molecular weight phosphotyrosine protein phosphatase DX05_RS00455 PF01757 Acyltransferase family DX05_RS00460 PF00171 Aldehyde dehydrogenase family DX05_RS00460 PF00465 Iron-containing alcohol dehydrogenase DX05_RS00465 PF00107 Zinc-binding dehydrogenase DX05_RS00465 PF08240 Alcohol dehydrogenase GroES-like domain DX05_RS00470 PF00291 Pyridoxal-phosphate dependent enzyme DX05_RS00470 PF14821 Threonine synthase N terminus DX05_RS00475 PF01554 MatE DX05_RS00480 PF00338 Ribosomal protein S10p/S20e DX05_RS00485 PF00297 Ribosomal protein L3 DX05_RS00490 PF00573 Ribosomal protein L4/L1 family DX05_RS00495 PF00276 Ribosomal protein L23 DX05_RS00500 PF00181 Ribosomal Proteins L2, RNA binding domain DX05_RS00500 PF03947 Ribosomal Proteins L2, C-terminal domain DX05_RS00505 PF00203 Ribosomal protein S19 DX05_RS00510 PF00237 Ribosomal protein L22p/L17e DX05_RS00515 PF00189 Ribosomal protein S3, C-terminal domain DX05_RS00515 PF07650 KH domain DX05_RS00520 PF00252 Ribosomal protein L16p/L10e DX05_RS00525 PF00831 Ribosomal L29 protein DX05_RS00530 PF00366 Ribosomal protein S17 DX05_RS00535 PF00238 Ribosomal protein L14p/L23e DX05_RS00540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DX05_RS00540 PF00467 KOW motif DX05_RS00545 PF00673 ribosomal L5P family C-terminus DX05_RS00545 PF00281 Ribosomal protein L5 DX05_RS00550 PF00253 Ribosomal protein S14p/S29e DX05_RS00555 PF00410 Ribosomal protein S8 DX05_RS00560 PF00347 Ribosomal protein L6 DX05_RS00565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DX05_RS00570 PF03719 Ribosomal protein S5, C-terminal domain DX05_RS00570 PF00333 Ribosomal protein S5, N-terminal domain DX05_RS00575 PF00327 Ribosomal protein L30p/L7e DX05_RS00580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DX05_RS00585 PF00344 SecY translocase DX05_RS00595 PF01176 Translation initiation factor 1A / IF-1 DX05_RS00600 PF00416 Ribosomal protein S13/S18 DX05_RS00605 PF00411 Ribosomal protein S11 DX05_RS00610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DX05_RS00610 PF01000 RNA polymerase Rpb3/RpoA insert domain DX05_RS00610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DX05_RS00615 PF01196 Ribosomal protein L17 DX05_RS00730 PF11208 Protein of unknown function (DUF2992) DX05_RS00735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS00750 PF02557 D-alanyl-D-alanine carboxypeptidase DX05_RS00755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DX05_RS00755 PF13457 GW (Gly-Tryp) dipeptide domain DX05_RS00760 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DX05_RS00760 PF01628 HrcA protein C terminal domain DX05_RS00765 PF01025 GrpE DX05_RS00770 PF00012 Hsp70 protein DX05_RS00775 PF00226 DnaJ domain DX05_RS00775 PF01556 DnaJ C terminal domain DX05_RS00775 PF00684 DnaJ central domain DX05_RS00780 PF00392 Bacterial regulatory proteins, gntR family DX05_RS00780 PF00155 Aminotransferase class I and II DX05_RS00785 PF01416 tRNA pseudouridine synthase DX05_RS00790 PF08543 Phosphomethylpyrimidine kinase DX05_RS00795 PF07155 ECF-type riboflavin transporter, S component DX05_RS00800 PF04260 Protein of unknown function (DUF436) DX05_RS00810 PF00924 Mechanosensitive ion channel DX05_RS00815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DX05_RS00815 PF05698 Bacterial trigger factor protein (TF) C-terminus DX05_RS00815 PF05697 Bacterial trigger factor protein (TF) DX05_RS00820 PF05066 HB1, ASXL, restriction endonuclease HTH domain DX05_RS00825 PF06418 CTP synthase N-terminus DX05_RS00825 PF00117 Glutamine amidotransferase class-I DX05_RS00840 PF00692 dUTPase DX05_RS00845 PF18073 Rubredoxin metal binding domain DX05_RS00850 PF00484 Carbonic anhydrase DX05_RS00855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DX05_RS00855 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS00860 PF00749 tRNA synthetases class I (E and Q), catalytic domain DX05_RS00865 PF13407 Periplasmic binding protein domain DX05_RS00870 PF02653 Branched-chain amino acid transport system / permease component DX05_RS00875 PF00005 ABC transporter DX05_RS00880 PF05025 RbsD / FucU transport protein family DX05_RS00885 PF00294 pfkB family carbohydrate kinase DX05_RS00890 PF00356 Bacterial regulatory proteins, lacI family DX05_RS00895 PF02687 FtsX-like permease family DX05_RS00900 PF00005 ABC transporter DX05_RS00905 PF00072 Response regulator receiver domain DX05_RS00905 PF00486 Transcriptional regulatory protein, C terminal DX05_RS00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS00910 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS00915 PF00764 Arginosuccinate synthase DX05_RS00920 PF14698 Argininosuccinate lyase C-terminal DX05_RS00920 PF00206 Lyase DX05_RS00925 PF01116 Fructose-bisphosphate aldolase class-II DX05_RS00930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DX05_RS00930 PF00056 lactate/malate dehydrogenase, NAD binding domain DX05_RS00935 PF00830 Ribosomal L28 family DX05_RS00940 PF03780 Asp23 family, cell envelope-related function DX05_RS00945 PF02734 DAK2 domain DX05_RS00945 PF13684 Dihydroxyacetone kinase family DX05_RS00965 PF00005 ABC transporter DX05_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS00980 PF02673 Bacitracin resistance protein BacA DX05_RS00985 PF05389 Negative regulator of genetic competence (MecA) DX05_RS00990 PF00953 Glycosyl transferase family 4 DX05_RS00995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS01005 PF00005 ABC transporter DX05_RS01010 PF01458 Uncharacterized protein family (UPF0051) DX05_RS01015 PF00266 Aminotransferase class-V DX05_RS01020 PF01592 NifU-like N terminal domain DX05_RS01025 PF01458 Uncharacterized protein family (UPF0051) DX05_RS01030 PF00768 D-alanyl-D-alanine carboxypeptidase DX05_RS01030 PF07943 Penicillin-binding protein 5, C-terminal domain DX05_RS01035 PF00768 D-alanyl-D-alanine carboxypeptidase DX05_RS01035 PF07943 Penicillin-binding protein 5, C-terminal domain DX05_RS01040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DX05_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01050 PF12911 N-terminal TM domain of oligopeptide transport permease C DX05_RS01055 PF00005 ABC transporter DX05_RS01055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DX05_RS01060 PF00005 ABC transporter DX05_RS01060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DX05_RS01090 PF00288 GHMP kinases N terminal domain DX05_RS01090 PF08544 GHMP kinases C terminal DX05_RS01095 PF01047 MarR family DX05_RS01100 PF00005 ABC transporter DX05_RS01105 PF00950 ABC 3 transport family DX05_RS01115 PF02899 Phage integrase, N-terminal SAM-like domain DX05_RS01115 PF00589 Phage integrase family DX05_RS01215 PF00579 tRNA synthetases class I (W and Y) DX05_RS01215 PF01479 S4 domain DX05_RS01220 PF00905 Penicillin binding protein transpeptidase domain DX05_RS01220 PF00912 Transglycosylase DX05_RS01225 PF04563 RNA polymerase beta subunit DX05_RS01225 PF04565 RNA polymerase Rpb2, domain 3 DX05_RS01225 PF04561 RNA polymerase Rpb2, domain 2 DX05_RS01225 PF10385 RNA polymerase beta subunit external 1 domain DX05_RS01225 PF00562 RNA polymerase Rpb2, domain 6 DX05_RS01225 PF04560 RNA polymerase Rpb2, domain 7 DX05_RS01230 PF04983 RNA polymerase Rpb1, domain 3 DX05_RS01230 PF05000 RNA polymerase Rpb1, domain 4 DX05_RS01230 PF04998 RNA polymerase Rpb1, domain 5 DX05_RS01230 PF00623 RNA polymerase Rpb1, domain 2 DX05_RS01230 PF04997 RNA polymerase Rpb1, domain 1 DX05_RS01240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS01250 PF00437 Type II/IV secretion system protein DX05_RS01260 PF00665 Integrase core domain DX05_RS01260 PF13333 Integrase core domain DX05_RS01260 PF13276 HTH-like domain DX05_RS01285 PF00871 Acetokinase family DX05_RS01300 PF14748 Pyrroline-5-carboxylate reductase dimerisation DX05_RS01300 PF03807 NADP oxidoreductase coenzyme F420-dependent DX05_RS01305 PF05343 M42 glutamyl aminopeptidase DX05_RS01320 PF00085 Thioredoxin DX05_RS01325 PF14794 Domain of unknown function (DUF4479) DX05_RS01325 PF01588 Putative tRNA binding domain DX05_RS01335 PF00436 Single-strand binding protein family DX05_RS01340 PF13419 Haloacid dehalogenase-like hydrolase DX05_RS01345 PF06580 Histidine kinase DX05_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS01345 PF07694 5TMR of 5TMR-LYT DX05_RS01355 PF03788 LrgA family DX05_RS01360 PF04172 LrgB-like family DX05_RS01365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DX05_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01375 PF12911 N-terminal TM domain of oligopeptide transport permease C DX05_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01380 PF12558 ATP-binding cassette cobalt transporter DX05_RS01380 PF00005 ABC transporter DX05_RS01385 PF00005 ABC transporter DX05_RS01390 PF02378 Phosphotransferase system, EIIC DX05_RS01390 PF00367 phosphotransferase system, EIIB DX05_RS01395 PF16657 Maltogenic Amylase, C-terminal domain DX05_RS01395 PF00128 Alpha amylase, catalytic domain DX05_RS01400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DX05_RS01405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DX05_RS01410 PF03611 PTS system sugar-specific permease component DX05_RS01415 PF00456 Transketolase, thiamine diphosphate binding domain DX05_RS01420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DX05_RS01420 PF02779 Transketolase, pyrimidine binding domain DX05_RS01420 PF02780 Transketolase, C-terminal domain DX05_RS01425 PF00111 2Fe-2S iron-sulfur cluster binding domain DX05_RS01425 PF00970 Oxidoreductase FAD-binding domain DX05_RS01425 PF00175 Oxidoreductase NAD-binding domain DX05_RS01430 PF00312 Ribosomal protein S15 DX05_RS01435 PF00013 KH domain DX05_RS01435 PF01138 3' exoribonuclease family, domain 1 DX05_RS01435 PF03725 3' exoribonuclease family, domain 2 DX05_RS01435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DX05_RS01435 PF00575 S1 RNA binding domain DX05_RS01445 PF06426 Serine acetyltransferase, N-terminal DX05_RS01445 PF00132 Bacterial transferase hexapeptide (six repeats) DX05_RS01455 PF01406 tRNA synthetases class I (C) catalytic domain DX05_RS01455 PF09190 DALR domain DX05_RS01460 PF00636 Ribonuclease III domain DX05_RS01470 PF08032 RNA 2'-O ribose methyltransferase substrate binding DX05_RS01470 PF00588 SpoU rRNA Methylase family DX05_RS01480 PF02645 Uncharacterised protein, DegV family COG1307 DX05_RS01485 PF01381 Helix-turn-helix DX05_RS01490 PF00572 Ribosomal protein L13 DX05_RS01495 PF00380 Ribosomal protein S9/S16 DX05_RS01500 PF02899 Phage integrase, N-terminal SAM-like domain DX05_RS01500 PF00589 Phage integrase family DX05_RS01535 PF02486 Replication initiation factor DX05_RS01545 PF01076 Plasmid recombination enzyme DX05_RS01565 PF06013 Proteins of 100 residues with WXG DX05_RS01605 PF01381 Helix-turn-helix DX05_RS01610 PF07690 Major Facilitator Superfamily DX05_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DX05_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01630 PF00005 ABC transporter DX05_RS01630 PF00571 CBS domain DX05_RS01720 PF00958 GMP synthase C terminal domain DX05_RS01720 PF00117 Glutamine amidotransferase class-I DX05_RS01720 PF13673 Acetyltransferase (GNAT) domain DX05_RS01720 PF13302 Acetyltransferase (GNAT) domain DX05_RS01720 PF03352 Methyladenine glycosylase DX05_RS01735 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DX05_RS01745 PF00440 Bacterial regulatory proteins, tetR family DX05_RS01755 PF00005 ABC transporter DX05_RS01765 PF03551 Transcriptional regulator PadR-like family DX05_RS01775 PF01979 Amidohydrolase family DX05_RS01780 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DX05_RS01785 PF02091 Glycyl-tRNA synthetase alpha subunit DX05_RS01790 PF02525 Flavodoxin-like fold DX05_RS01795 PF02092 Glycyl-tRNA synthetase beta subunit DX05_RS01795 PF05746 DALR anticodon binding domain DX05_RS01800 PF05979 Bacterial protein of unknown function (DUF896) DX05_RS01810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DX05_RS01810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DX05_RS01815 PF01266 FAD dependent oxidoreductase DX05_RS01815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DX05_RS01820 PF00230 Major intrinsic protein DX05_RS01825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DX05_RS01825 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS01835 PF00456 Transketolase, thiamine diphosphate binding domain DX05_RS01835 PF02780 Transketolase, C-terminal domain DX05_RS01835 PF02779 Transketolase, pyrimidine binding domain DX05_RS01845 PF00005 ABC transporter DX05_RS01855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DX05_RS01855 PF02378 Phosphotransferase system, EIIC DX05_RS01855 PF00367 phosphotransferase system, EIIB DX05_RS01860 PF00696 Amino acid kinase family DX05_RS01865 PF00171 Aldehyde dehydrogenase family DX05_RS01870 PF01795 MraW methylase family DX05_RS01880 PF03793 PASTA domain DX05_RS01880 PF03717 Penicillin-binding Protein dimerisation domain DX05_RS01880 PF00905 Penicillin binding protein transpeptidase domain DX05_RS01885 PF00953 Glycosyl transferase family 4 DX05_RS01885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DX05_RS01890 PF00270 DEAD/DEAH box helicase DX05_RS01890 PF00271 Helicase conserved C-terminal domain DX05_RS01895 PF00497 Bacterial extracellular solute-binding proteins, family 3 DX05_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS01905 PF00005 ABC transporter DX05_RS01915 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS01920 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DX05_RS01920 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DX05_RS01920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DX05_RS01925 PF02540 NAD synthase DX05_RS01935 PF03051 Peptidase C1-like family DX05_RS01940 PF00912 Transglycosylase DX05_RS01940 PF00905 Penicillin binding protein transpeptidase domain DX05_RS01945 PF03838 Recombination protein U DX05_RS01950 PF06908 YspA SLOG family DX05_RS01955 PF05103 DivIVA protein DX05_RS01960 PF02926 THUMP domain DX05_RS01960 PF01170 Putative RNA methylase family UPF0020 DX05_RS01965 PF18708 MapZ extracellular C-terminal domain 2 DX05_RS01965 PF18041 MapZ extracellular domain 1 DX05_RS01970 PF02664 S-Ribosylhomocysteinase (LuxS) DX05_RS01975 PF00013 KH domain DX05_RS01975 PF12072 Domain of unknown function (DUF3552) DX05_RS01975 PF01966 HD domain DX05_RS01980 PF00005 ABC transporter DX05_RS01995 PF00196 Bacterial regulatory proteins, luxR family DX05_RS01995 PF00072 Response regulator receiver domain DX05_RS02000 PF06736 Protein of unknown function (DUF1211) DX05_RS02005 PF00625 Guanylate kinase DX05_RS02010 PF01192 RNA polymerase Rpb6 DX05_RS02015 PF00271 Helicase conserved C-terminal domain DX05_RS02015 PF04851 Type III restriction enzyme, res subunit DX05_RS02015 PF17764 3′ DNA-binding domain (3′BD) DX05_RS02015 PF18074 Primosomal protein N C-terminal domain DX05_RS02015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DX05_RS02020 PF00551 Formyl transferase DX05_RS02020 PF02911 Formyl transferase, C-terminal domain DX05_RS02025 PF01029 NusB family DX05_RS02025 PF01189 16S rRNA methyltransferase RsmB/F DX05_RS02035 PF03793 PASTA domain DX05_RS02035 PF00069 Protein kinase domain DX05_RS02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS02045 PF00672 HAMP domain DX05_RS02045 PF07730 Histidine kinase DX05_RS02050 PF00072 Response regulator receiver domain DX05_RS02050 PF00196 Bacterial regulatory proteins, luxR family DX05_RS02055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DX05_RS02060 PF00575 S1 RNA binding domain DX05_RS02065 PF04055 Radical SAM superfamily DX05_RS02070 PF00455 DeoR C terminal sensor domain DX05_RS02070 PF08220 DeoR-like helix-turn-helix domain DX05_RS02075 PF13936 Helix-turn-helix domain DX05_RS02075 PF04198 Putative sugar-binding domain DX05_RS02080 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DX05_RS02090 PF02378 Phosphotransferase system, EIIC DX05_RS02095 PF01228 Glycine radical DX05_RS02095 PF02901 Pyruvate formate lyase-like DX05_RS02100 PF00923 Transaldolase/Fructose-6-phosphate aldolase DX05_RS02105 PF00465 Iron-containing alcohol dehydrogenase DX05_RS02110 PF00291 Pyridoxal-phosphate dependent enzyme DX05_RS02115 PF01205 Uncharacterized protein family UPF0029 DX05_RS02115 PF09186 Domain of unknown function (DUF1949) DX05_RS02120 PF04851 Type III restriction enzyme, res subunit DX05_RS02120 PF00271 Helicase conserved C-terminal domain DX05_RS02130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DX05_RS02130 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DX05_RS02160 PF00696 Amino acid kinase family DX05_RS02160 PF13840 ACT domain DX05_RS02165 PF13419 Haloacid dehalogenase-like hydrolase DX05_RS02170 PF00378 Enoyl-CoA hydratase/isomerase DX05_RS02180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DX05_RS02180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DX05_RS02185 PF00550 Phosphopantetheine attachment site DX05_RS02190 PF03060 Nitronate monooxygenase DX05_RS02195 PF00698 Acyl transferase domain DX05_RS02205 PF00109 Beta-ketoacyl synthase, N-terminal domain DX05_RS02205 PF02801 Beta-ketoacyl synthase, C-terminal domain DX05_RS02210 PF00364 Biotin-requiring enzyme DX05_RS02215 PF07977 FabA-like domain DX05_RS02220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DX05_RS02220 PF00289 Biotin carboxylase, N-terminal domain DX05_RS02220 PF02785 Biotin carboxylase C-terminal domain DX05_RS02225 PF17848 Acetyl-coA carboxylase zinc finger domain DX05_RS02225 PF01039 Carboxyl transferase domain DX05_RS02230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DX05_RS02240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DX05_RS02240 PF02403 Seryl-tRNA synthetase N-terminal domain DX05_RS02260 PF03613 PTS system mannose/fructose/sorbose family IID component DX05_RS02265 PF03609 PTS system sorbose-specific iic component DX05_RS02270 PF03610 PTS system fructose IIA component DX05_RS02270 PF03830 PTS system sorbose subfamily IIB component DX05_RS02290 PF00860 Permease family DX05_RS02295 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DX05_RS02300 PF13302 Acetyltransferase (GNAT) domain DX05_RS02305 PF03816 Cell envelope-related transcriptional attenuator domain DX05_RS02315 PF01230 HIT domain DX05_RS02330 PF00005 ABC transporter DX05_RS02335 PF05975 Bacterial ABC transporter protein EcsB DX05_RS02345 PF02390 Putative methyltransferase DX05_RS02355 PF17384 RimP C-terminal SH3 domain DX05_RS02355 PF02576 RimP N-terminal domain DX05_RS02360 PF08529 NusA N-terminal domain DX05_RS02360 PF00575 S1 RNA binding domain DX05_RS02360 PF13184 NusA-like KH domain DX05_RS02365 PF04296 Protein of unknown function (DUF448) DX05_RS02370 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DX05_RS02375 PF11987 Translation-initiation factor 2 DX05_RS02375 PF04760 Translation initiation factor IF-2, N-terminal region DX05_RS02375 PF00009 Elongation factor Tu GTP binding domain DX05_RS02380 PF02033 Ribosome-binding factor A DX05_RS02385 PF07859 alpha/beta hydrolase fold DX05_RS02390 PF03965 Penicillinase repressor DX05_RS02395 PF00403 Heavy-metal-associated domain DX05_RS02405 PF03458 UPF0126 domain DX05_RS02415 PF01367 5'-3' exonuclease, C-terminal SAM fold DX05_RS02415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DX05_RS02415 PF00476 DNA polymerase family A DX05_RS02420 PF13380 CoA binding domain DX05_RS02425 PF01475 Ferric uptake regulator family DX05_RS02430 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS02440 PF00486 Transcriptional regulatory protein, C terminal DX05_RS02440 PF00072 Response regulator receiver domain DX05_RS02445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS02445 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS02455 PF01702 Queuine tRNA-ribosyltransferase DX05_RS02465 PF02632 BioY family DX05_RS02470 PF12706 Beta-lactamase superfamily domain DX05_RS02475 PF14437 MafB19-like deaminase DX05_RS02485 PF00342 Phosphoglucose isomerase DX05_RS02490 PF01812 5-formyltetrahydrofolate cyclo-ligase family DX05_RS02495 PF01694 Rhomboid family DX05_RS02500 PF02608 ABC transporter substrate-binding protein PnrA-like DX05_RS02515 PF00483 Nucleotidyl transferase DX05_RS02520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DX05_RS02520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DX05_RS02525 PF00825 Ribonuclease P DX05_RS02530 PF02096 60Kd inner membrane protein DX05_RS02595 PF04167 Protein of unknown function (DUF402) DX05_RS02600 PF02631 RecX family DX05_RS02605 PF01938 TRAM domain DX05_RS02605 PF05958 tRNA (Uracil-5-)-methyltransferase DX05_RS02615 PF13673 Acetyltransferase (GNAT) domain DX05_RS02625 PF01501 Glycosyl transferase family 8 DX05_RS02625 PF00535 Glycosyl transferase family 2 DX05_RS02630 PF00268 Ribonucleotide reductase, small chain DX05_RS02635 PF07972 NrdI Flavodoxin like DX05_RS02640 PF02867 Ribonucleotide reductase, barrel domain DX05_RS02640 PF08343 Ribonucleotide reductase N-terminal DX05_RS02640 PF00317 Ribonucleotide reductase, all-alpha domain DX05_RS02660 PF00665 Integrase core domain DX05_RS02660 PF13333 Integrase core domain DX05_RS02660 PF13276 HTH-like domain DX05_RS02670 PF02627 Carboxymuconolactone decarboxylase family DX05_RS02680 PF13411 MerR HTH family regulatory protein DX05_RS02690 PF00248 Aldo/keto reductase family DX05_RS02695 PF01545 Cation efflux family DX05_RS02705 PF12833 Helix-turn-helix domain DX05_RS02710 PF17480 AlphaC C-terminal DX05_RS02710 PF04650 YSIRK type signal peptide DX05_RS02710 PF00746 LPXTG cell wall anchor motif DX05_RS02710 PF08829 Alpha C protein N terminal DX05_RS02745 PF13302 Acetyltransferase (GNAT) domain DX05_RS02755 PF08264 Anticodon-binding domain of tRNA DX05_RS02755 PF00133 tRNA synthetases class I (I, L, M and V) DX05_RS02755 PF10458 Valyl tRNA synthetase tRNA binding arm DX05_RS02760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DX05_RS02760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DX05_RS02770 PF04237 YjbR DX05_RS02775 PF03590 Aspartate-ammonia ligase DX05_RS02795 PF01467 Cytidylyltransferase-like DX05_RS02800 PF13180 PDZ domain DX05_RS02800 PF05362 Lon protease (S16) C-terminal proteolytic domain DX05_RS02805 PF02872 5'-nucleotidase, C-terminal domain DX05_RS02810 PF06265 Protein of unknown function (DUF1027) DX05_RS02815 PF04055 Radical SAM superfamily DX05_RS02825 PF01609 Transposase DDE domain DX05_RS02825 PF13808 DDE_Tnp_1-associated DX05_RS02830 PF00664 ABC transporter transmembrane region DX05_RS02830 PF00005 ABC transporter DX05_RS02835 PF00005 ABC transporter DX05_RS02835 PF00664 ABC transporter transmembrane region DX05_RS02840 PF00117 Glutamine amidotransferase class-I DX05_RS02845 PF02632 BioY family DX05_RS02850 PF06968 Biotin and Thiamin Synthesis associated domain DX05_RS02850 PF04055 Radical SAM superfamily DX05_RS02860 PF02803 Thiolase, C-terminal domain DX05_RS02860 PF00108 Thiolase, N-terminal domain DX05_RS02870 PF00730 HhH-GPD superfamily base excision DNA repair protein DX05_RS02870 PF00633 Helix-hairpin-helix motif DX05_RS02870 PF10576 Iron-sulfur binding domain of endonuclease III DX05_RS02885 PF00480 ROK family DX05_RS02890 PF00581 Rhodanese-like domain DX05_RS02895 PF00009 Elongation factor Tu GTP binding domain DX05_RS02895 PF03144 Elongation factor Tu domain 2 DX05_RS02895 PF14492 Elongation Factor G, domain II DX05_RS02895 PF00679 Elongation factor G C-terminus DX05_RS02905 PF08245 Mur ligase middle domain DX05_RS02905 PF02875 Mur ligase family, glutamate ligase domain DX05_RS02910 PF04101 Glycosyltransferase family 28 C-terminal domain DX05_RS02910 PF03033 Glycosyltransferase family 28 N-terminal domain DX05_RS02915 PF08478 POTRA domain, FtsQ-type DX05_RS02920 PF11983 Membrane-attachment and polymerisation-promoting switch DX05_RS02920 PF02491 SHS2 domain inserted in FTSA DX05_RS02925 PF00091 Tubulin/FtsZ family, GTPase domain DX05_RS02925 PF12327 FtsZ family, C-terminal domain DX05_RS02930 PF01168 Alanine racemase, N-terminal domain DX05_RS02935 PF04472 Cell division protein SepF DX05_RS02940 PF02325 YGGT family DX05_RS02945 PF17774 Putative RNA-binding domain in YlmH DX05_RS02945 PF01479 S4 domain DX05_RS02950 PF05103 DivIVA protein DX05_RS02955 PF00133 tRNA synthetases class I (I, L, M and V) DX05_RS02955 PF08264 Anticodon-binding domain of tRNA DX05_RS02965 PF00293 NUDIX domain DX05_RS02970 PF00004 ATPase family associated with various cellular activities (AAA) DX05_RS02970 PF10431 C-terminal, D2-small domain, of ClpB protein DX05_RS02970 PF17871 AAA lid domain DX05_RS02970 PF07724 AAA domain (Cdc48 subfamily) DX05_RS02975 PF08796 Protein of unknown function (DUF1797) DX05_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS02985 PF00005 ABC transporter DX05_RS02990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DX05_RS02990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DX05_RS02990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DX05_RS02990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DX05_RS02995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DX05_RS02995 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DX05_RS03000 PF01256 Carbohydrate kinase DX05_RS03005 PF13742 OB-fold nucleic acid binding domain DX05_RS03005 PF02601 Exonuclease VII, large subunit DX05_RS03010 PF02609 Exonuclease VII small subunit DX05_RS03015 PF00348 Polyprenyl synthetase DX05_RS03020 PF01479 S4 domain DX05_RS03020 PF01728 FtsJ-like methyltransferase DX05_RS03025 PF01316 Arginine repressor, DNA binding domain DX05_RS03025 PF02863 Arginine repressor, C-terminal domain DX05_RS03030 PF13476 AAA domain DX05_RS03035 PF02645 Uncharacterised protein, DegV family COG1307 DX05_RS03040 PF13472 GDSL-like Lipase/Acylhydrolase family DX05_RS03050 PF00216 Bacterial DNA-binding protein DX05_RS03060 PF13333 Integrase core domain DX05_RS03060 PF00665 Integrase core domain DX05_RS03060 PF13276 HTH-like domain DX05_RS03070 PF01180 Dihydroorotate dehydrogenase DX05_RS03080 PF02388 FemAB family DX05_RS03085 PF02388 FemAB family DX05_RS03095 PF01966 HD domain DX05_RS03105 PF00689 Cation transporting ATPase, C-terminus DX05_RS03105 PF00690 Cation transporter/ATPase, N-terminus DX05_RS03115 PF06874 Firmicute fructose-1,6-bisphosphatase DX05_RS03120 PF08331 Domain of unknown function (DUF1730) DX05_RS03125 PF03462 PCRF domain DX05_RS03125 PF00472 RF-1 domain DX05_RS03130 PF00005 ABC transporter DX05_RS03135 PF02687 FtsX-like permease family DX05_RS03135 PF18075 FtsX extracellular domain DX05_RS03150 PF00753 Metallo-beta-lactamase superfamily DX05_RS03160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS03165 PF04851 Type III restriction enzyme, res subunit DX05_RS03165 PF13307 Helicase C-terminal domain DX05_RS03165 PF00929 Exonuclease DX05_RS03170 PF00155 Aminotransferase class I and II DX05_RS03175 PF01336 OB-fold nucleic acid binding domain DX05_RS03175 PF00152 tRNA synthetases class II (D, K and N) DX05_RS03185 PF01156 Inosine-uridine preferring nucleoside hydrolase DX05_RS03195 PF03668 P-loop ATPase protein family DX05_RS03200 PF01933 Uncharacterised protein family UPF0052 DX05_RS03205 PF10298 WhiA N-terminal LAGLIDADG-like domain DX05_RS03205 PF14527 WhiA LAGLIDADG-like domain DX05_RS03205 PF02650 WhiA C-terminal HTH domain DX05_RS03210 PF03577 Peptidase family C69 DX05_RS03215 PF01297 Zinc-uptake complex component A periplasmic DX05_RS03215 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DX05_RS03225 PF01197 Ribosomal protein L31 DX05_RS03230 PF02272 DHHA1 domain DX05_RS03230 PF01368 DHH family DX05_RS03235 PF00962 Adenosine/AMP deaminase DX05_RS03240 PF00258 Flavodoxin DX05_RS03245 PF00793 DAHP synthetase I family DX05_RS03245 PF01817 Chorismate mutase type II DX05_RS03250 PF00654 Voltage gated chloride channel DX05_RS03255 PF01245 Ribosomal protein L19 DX05_RS03265 PF00589 Phage integrase family DX05_RS03265 PF14659 Phage integrase, N-terminal SAM-like domain DX05_RS03580 PF00005 ABC transporter DX05_RS03590 PF00072 Response regulator receiver domain DX05_RS03590 PF00486 Transcriptional regulatory protein, C terminal DX05_RS03595 PF00672 HAMP domain DX05_RS03595 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS03600 PF01610 Transposase DX05_RS03600 PF13683 Integrase core domain DX05_RS03605 PF05532 CsbD-like DX05_RS03610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS03620 PF01098 Cell cycle protein DX05_RS03625 PF01609 Transposase DDE domain DX05_RS03625 PF13808 DDE_Tnp_1-associated DX05_RS03635 PF01751 Toprim domain DX05_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS03635 PF00204 DNA gyrase B DX05_RS03635 PF00986 DNA gyrase B subunit, carboxyl terminus DX05_RS03640 PF06160 Septation ring formation regulator, EzrA DX05_RS03660 PF00113 Enolase, C-terminal TIM barrel domain DX05_RS03660 PF03952 Enolase, N-terminal domain DX05_RS03670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DX05_RS03675 PF01202 Shikimate kinase DX05_RS03680 PF03816 Cell envelope-related transcriptional attenuator domain DX05_RS03685 PF05958 tRNA (Uracil-5-)-methyltransferase DX05_RS03755 PF01131 DNA topoisomerase DX05_RS03755 PF01751 Toprim domain DX05_RS03775 PF00072 Response regulator receiver domain DX05_RS03775 PF00486 Transcriptional regulatory protein, C terminal DX05_RS03780 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS03785 PF00005 ABC transporter DX05_RS03785 PF02687 FtsX-like permease family DX05_RS03785 PF12704 MacB-like periplasmic core domain DX05_RS03805 PF17841 BID domain of Bartonella effector protein (Bep) DX05_RS03805 PF03389 MobA/MobL family DX05_RS03805 PF01443 Viral (Superfamily 1) RNA helicase DX05_RS03860 PF00271 Helicase conserved C-terminal domain DX05_RS03860 PF08148 DSHCT (NUC185) domain DX05_RS03860 PF00270 DEAD/DEAH box helicase DX05_RS03865 PF03432 Relaxase/Mobilisation nuclease domain DX05_RS03875 PF00440 Bacterial regulatory proteins, tetR family DX05_RS03875 PF17922 Tetracyclin repressor-like, C-terminal domain DX05_RS03880 PF00005 ABC transporter DX05_RS03880 PF00664 ABC transporter transmembrane region DX05_RS03880 PF08021 Siderophore-interacting FAD-binding domain DX05_RS03880 PF04954 Siderophore-interacting protein DX05_RS03885 PF00664 ABC transporter transmembrane region DX05_RS03885 PF00005 ABC transporter DX05_RS03900 PF00005 ABC transporter DX05_RS03905 PF01554 MatE DX05_RS03920 PF02796 Helix-turn-helix domain of resolvase DX05_RS03920 PF00239 Resolvase, N terminal domain DX05_RS03940 PF00144 Beta-lactamase DX05_RS03945 PF00005 ABC transporter DX05_RS03975 PF00550 Phosphopantetheine attachment site DX05_RS03980 PF07977 FabA-like domain DX05_RS03985 PF00005 ABC transporter DX05_RS04000 PF01571 Aminomethyltransferase folate-binding domain DX05_RS04000 PF08669 Glycine cleavage T-protein C-terminal barrel domain DX05_RS04005 PF00109 Beta-ketoacyl synthase, N-terminal domain DX05_RS04005 PF02801 Beta-ketoacyl synthase, C-terminal domain DX05_RS04035 PF00005 ABC transporter DX05_RS04045 PF01223 DNA/RNA non-specific endonuclease DX05_RS04050 PF09335 SNARE associated Golgi protein DX05_RS04055 PF00005 ABC transporter DX05_RS04060 PF03649 Uncharacterised protein family (UPF0014) DX05_RS04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DX05_RS04070 PF03466 LysR substrate binding domain DX05_RS04080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DX05_RS04080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DX05_RS04090 PF00294 pfkB family carbohydrate kinase DX05_RS04095 PF02837 Glycosyl hydrolases family 2, sugar binding domain DX05_RS04095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DX05_RS04095 PF00703 Glycosyl hydrolases family 2 DX05_RS04100 PF07729 FCD domain DX05_RS04100 PF00392 Bacterial regulatory proteins, gntR family DX05_RS04105 PF01081 KDPG and KHG aldolase DX05_RS04110 PF02614 Glucuronate isomerase DX05_RS04115 PF03786 D-mannonate dehydratase (UxuA) DX05_RS04120 PF00106 short chain dehydrogenase DX05_RS04130 PF00933 Glycosyl hydrolase family 3 N terminal domain DX05_RS04135 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS04145 PF01321 Creatinase/Prolidase N-terminal domain DX05_RS04145 PF00557 Metallopeptidase family M24 DX05_RS04150 PF00356 Bacterial regulatory proteins, lacI family DX05_RS04155 PF09154 Domain of unknown function (DUF1939) DX05_RS04155 PF00128 Alpha amylase, catalytic domain DX05_RS04160 PF13439 Glycosyltransferase Family 4 DX05_RS04160 PF00534 Glycosyl transferases group 1 DX05_RS04165 PF00534 Glycosyl transferases group 1 DX05_RS04165 PF13439 Glycosyltransferase Family 4 DX05_RS04170 PF03129 Anticodon binding domain DX05_RS04170 PF02824 TGS domain DX05_RS04170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DX05_RS04170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DX05_RS04175 PF00486 Transcriptional regulatory protein, C terminal DX05_RS04175 PF00072 Response regulator receiver domain DX05_RS04190 PF03413 Peptidase propeptide and YPEB domain DX05_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS04205 PF00497 Bacterial extracellular solute-binding proteins, family 3 DX05_RS04210 PF00005 ABC transporter DX05_RS04215 PF00486 Transcriptional regulatory protein, C terminal DX05_RS04215 PF00072 Response regulator receiver domain DX05_RS04220 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS04220 PF00672 HAMP domain DX05_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS04220 PF13426 PAS domain DX05_RS04225 PF00753 Metallo-beta-lactamase superfamily DX05_RS04230 PF04304 Protein of unknown function (DUF454) DX05_RS04235 PF00035 Double-stranded RNA binding motif DX05_RS04235 PF14622 Ribonuclease-III-like DX05_RS04240 PF02463 RecF/RecN/SMC N terminal domain DX05_RS04240 PF06470 SMC proteins Flexible Hinge Domain DX05_RS04245 PF13808 DDE_Tnp_1-associated DX05_RS04245 PF01609 Transposase DDE domain DX05_RS04260 PF02881 SRP54-type protein, helical bundle domain DX05_RS04260 PF00448 SRP54-type protein, GTPase domain DX05_RS04270 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS04275 PF09323 Domain of unknown function (DUF1980) DX05_RS04280 PF03773 Predicted permease DX05_RS04295 PF16921 Tex protein YqgF-like domain DX05_RS04295 PF09371 Tex-like protein N-terminal domain DX05_RS04295 PF17674 HHH domain DX05_RS04295 PF00575 S1 RNA binding domain DX05_RS04300 PF10263 SprT-like family DX05_RS04305 PF04024 PspC domain DX05_RS04310 PF07475 HPr Serine kinase C-terminal domain DX05_RS04310 PF02603 HPr Serine kinase N terminus DX05_RS04315 PF01790 Prolipoprotein diacylglyceryl transferase DX05_RS04325 PF12732 YtxH-like protein DX05_RS04340 PF16325 Peptidase family U32 C-terminal domain DX05_RS04340 PF01136 Peptidase family U32 DX05_RS04345 PF02229 Transcriptional Coactivator p15 (PC4) DX05_RS04355 PF01566 Natural resistance-associated macrophage protein DX05_RS04360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DX05_RS04360 PF01872 RibD C-terminal domain DX05_RS04365 PF00677 Lumazine binding domain DX05_RS04370 PF00925 GTP cyclohydrolase II DX05_RS04370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DX05_RS04375 PF00885 6,7-dimethyl-8-ribityllumazine synthase DX05_RS04380 PF00152 tRNA synthetases class II (D, K and N) DX05_RS04380 PF01336 OB-fold nucleic acid binding domain DX05_RS04395 PF04073 Aminoacyl-tRNA editing domain DX05_RS04400 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DX05_RS04405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS04430 PF08439 Oligopeptidase F DX05_RS04430 PF01432 Peptidase family M3 DX05_RS04435 PF00311 Phosphoenolpyruvate carboxylase DX05_RS04440 PF01098 Cell cycle protein DX05_RS04445 PF03144 Elongation factor Tu domain 2 DX05_RS04445 PF00009 Elongation factor Tu GTP binding domain DX05_RS04445 PF03143 Elongation factor Tu C-terminal domain DX05_RS04450 PF00121 Triosephosphate isomerase DX05_RS04455 PF00300 Histidine phosphatase superfamily (branch 1) DX05_RS04460 PF03717 Penicillin-binding Protein dimerisation domain DX05_RS04460 PF00905 Penicillin binding protein transpeptidase domain DX05_RS04465 PF02132 RecR protein DX05_RS04465 PF13662 Toprim domain DX05_RS04470 PF01820 D-ala D-ala ligase N-terminus DX05_RS04470 PF07478 D-ala D-ala ligase C-terminus DX05_RS04475 PF01225 Mur ligase family, catalytic domain DX05_RS04475 PF02875 Mur ligase family, glutamate ligase domain DX05_RS04475 PF08245 Mur ligase middle domain DX05_RS04480 PF07690 Major Facilitator Superfamily DX05_RS04495 PF16658 Class II release factor RF3, C-terminal domain DX05_RS04495 PF03144 Elongation factor Tu domain 2 DX05_RS04495 PF00009 Elongation factor Tu GTP binding domain DX05_RS04500 PF08000 Bacterial PH domain DX05_RS04505 PF09383 NIL domain DX05_RS04505 PF00005 ABC transporter DX05_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS04515 PF03180 NLPA lipoprotein DX05_RS04520 PF00271 Helicase conserved C-terminal domain DX05_RS04520 PF00270 DEAD/DEAH box helicase DX05_RS04525 PF01541 GIY-YIG catalytic domain DX05_RS04530 PF05175 Methyltransferase small domain DX05_RS04535 PF01553 Acyltransferase DX05_RS04540 PF10531 SLBB domain DX05_RS04545 PF13567 Domain of unknown function (DUF4131) DX05_RS04545 PF03772 Competence protein DX05_RS04545 PF00753 Metallo-beta-lactamase superfamily DX05_RS04555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DX05_RS04555 PF00356 Bacterial regulatory proteins, lacI family DX05_RS04560 PF00934 PE family DX05_RS04560 PF07859 alpha/beta hydrolase fold DX05_RS04565 PF01209 ubiE/COQ5 methyltransferase family DX05_RS04575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DX05_RS04575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DX05_RS04580 PF00874 PRD domain DX05_RS04580 PF03123 CAT RNA binding domain DX05_RS04585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DX05_RS04585 PF02378 Phosphotransferase system, EIIC DX05_RS04585 PF00367 phosphotransferase system, EIIB DX05_RS04590 PF00232 Glycosyl hydrolase family 1 DX05_RS04595 PF13556 PucR C-terminal helix-turn-helix domain DX05_RS04595 PF05651 Putative sugar diacid recognition DX05_RS04595 PF17853 GGDEF-like domain DX05_RS04600 PF02595 Glycerate kinase family DX05_RS04605 PF02447 GntP family permease DX05_RS04615 PF01047 MarR family DX05_RS04620 PF02547 Queuosine biosynthesis protein DX05_RS04630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DX05_RS04635 PF13409 Glutathione S-transferase, N-terminal domain DX05_RS04640 PF00849 RNA pseudouridylate synthase DX05_RS04640 PF01479 S4 domain DX05_RS04655 PF08439 Oligopeptidase F DX05_RS04655 PF01432 Peptidase family M3 DX05_RS04665 PF01596 O-methyltransferase DX05_RS04670 PF13145 PPIC-type PPIASE domain DX05_RS04675 PF04525 LURP-one-related DX05_RS04680 PF02272 DHHA1 domain DX05_RS04680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DX05_RS04680 PF01411 tRNA synthetases class II (A) DX05_RS04690 PF08437 Glycosyl transferase family 8 C-terminal DX05_RS04690 PF01501 Glycosyl transferase family 8 DX05_RS04700 PF01381 Helix-turn-helix DX05_RS04710 PF09515 Thiamine transporter protein (Thia_YuaJ) DX05_RS04715 PF00268 Ribonucleotide reductase, small chain DX05_RS04720 PF02867 Ribonucleotide reductase, barrel domain DX05_RS04720 PF00317 Ribonucleotide reductase, all-alpha domain DX05_RS04720 PF08343 Ribonucleotide reductase N-terminal DX05_RS04725 PF00462 Glutaredoxin DX05_RS04730 PF00381 PTS HPr component phosphorylation site DX05_RS04735 PF02896 PEP-utilising enzyme, TIM barrel domain DX05_RS04735 PF00391 PEP-utilising enzyme, mobile domain DX05_RS04735 PF05524 PEP-utilising enzyme, N-terminal DX05_RS04740 PF00171 Aldehyde dehydrogenase family DX05_RS04745 PF01522 Polysaccharide deacetylase DX05_RS04745 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DX05_RS04755 PF00270 DEAD/DEAH box helicase DX05_RS04755 PF00271 Helicase conserved C-terminal domain DX05_RS04760 PF00485 Phosphoribulokinase / Uridine kinase family DX05_RS04765 PF13808 DDE_Tnp_1-associated DX05_RS04765 PF01609 Transposase DDE domain DX05_RS04770 PF13185 GAF domain DX05_RS04775 PF12169 DNA polymerase III subunits gamma and tau domain III DX05_RS04785 PF08279 HTH domain DX05_RS04785 PF03099 Biotin/lipoate A/B protein ligase family DX05_RS04785 PF02237 Biotin protein ligase C terminal domain DX05_RS04790 PF00438 S-adenosylmethionine synthetase, N-terminal domain DX05_RS04790 PF02772 S-adenosylmethionine synthetase, central domain DX05_RS04790 PF02773 S-adenosylmethionine synthetase, C-terminal domain DX05_RS04815 PF09819 ABC-type cobalt transport system, permease component DX05_RS04820 PF00005 ABC transporter DX05_RS04830 PF03070 TENA/THI-4/PQQC family DX05_RS04835 PF08543 Phosphomethylpyrimidine kinase DX05_RS04840 PF02110 Hydroxyethylthiazole kinase family DX05_RS04845 PF02581 Thiamine monophosphate synthase DX05_RS04850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DX05_RS04860 PF00392 Bacterial regulatory proteins, gntR family DX05_RS04860 PF00571 CBS domain DX05_RS04860 PF07085 DRTGG domain DX05_RS04860 PF03061 Thioesterase superfamily DX05_RS04865 PF00557 Metallopeptidase family M24 DX05_RS04875 PF04138 GtrA-like protein DX05_RS04880 PF06177 QueT transporter DX05_RS04885 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DX05_RS04885 PF03120 NAD-dependent DNA ligase OB-fold domain DX05_RS04885 PF00533 BRCA1 C Terminus (BRCT) domain DX05_RS04885 PF01653 NAD-dependent DNA ligase adenylation domain DX05_RS04885 PF12826 Helix-hairpin-helix motif DX05_RS04890 PF00781 Diacylglycerol kinase catalytic domain DX05_RS04895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DX05_RS04895 PF17999 Pullulanase N1-terminal domain DX05_RS04895 PF00128 Alpha amylase, catalytic domain DX05_RS04900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DX05_RS04900 PF00128 Alpha amylase, catalytic domain DX05_RS04900 PF02806 Alpha amylase, C-terminal all-beta domain DX05_RS04905 PF00132 Bacterial transferase hexapeptide (six repeats) DX05_RS04905 PF00483 Nucleotidyl transferase DX05_RS04910 PF00483 Nucleotidyl transferase DX05_RS04915 PF08323 Starch synthase catalytic domain DX05_RS04915 PF00534 Glycosyl transferases group 1 DX05_RS04920 PF00137 ATP synthase subunit C DX05_RS04925 PF00119 ATP synthase A chain DX05_RS04930 PF00430 ATP synthase B/B' CF(0) DX05_RS04935 PF00213 ATP synthase delta (OSCP) subunit DX05_RS04940 PF02874 ATP synthase alpha/beta family, beta-barrel domain DX05_RS04940 PF00306 ATP synthase alpha/beta chain, C terminal domain DX05_RS04940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DX05_RS04945 PF00231 ATP synthase DX05_RS04950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DX05_RS04950 PF02874 ATP synthase alpha/beta family, beta-barrel domain DX05_RS04955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DX05_RS04955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DX05_RS04965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DX05_RS04975 PF01223 DNA/RNA non-specific endonuclease DX05_RS04980 PF01409 tRNA synthetases class II core domain (F) DX05_RS04980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DX05_RS04985 PF13673 Acetyltransferase (GNAT) domain DX05_RS04990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DX05_RS04990 PF01588 Putative tRNA binding domain DX05_RS04990 PF03147 Ferredoxin-fold anticodon binding domain DX05_RS04990 PF03484 tRNA synthetase B5 domain DX05_RS04990 PF03483 B3/4 domain DX05_RS05000 PF04228 Putative neutral zinc metallopeptidase DX05_RS05005 PF12705 PD-(D/E)XK nuclease superfamily DX05_RS05010 PF12705 PD-(D/E)XK nuclease superfamily DX05_RS05010 PF00580 UvrD/REP helicase N-terminal domain DX05_RS05010 PF13361 UvrD-like helicase C-terminal domain DX05_RS05020 PF10396 GTP-binding protein TrmE N-terminus DX05_RS05020 PF12631 MnmE helical domain DX05_RS05020 PF01926 50S ribosome-binding GTPase DX05_RS05025 PF12848 ABC transporter DX05_RS05025 PF00005 ABC transporter DX05_RS05025 PF16326 ABC transporter C-terminal domain DX05_RS05030 PF00676 Dehydrogenase E1 component DX05_RS05035 PF02780 Transketolase, C-terminal domain DX05_RS05035 PF02779 Transketolase, pyrimidine binding domain DX05_RS05035 PF00364 Biotin-requiring enzyme DX05_RS05040 PF02817 e3 binding domain DX05_RS05040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DX05_RS05040 PF00364 Biotin-requiring enzyme DX05_RS05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS05045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DX05_RS05050 PF10437 Bacterial lipoate protein ligase C-terminus DX05_RS05050 PF03099 Biotin/lipoate A/B protein ligase family DX05_RS05060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS05065 PF07685 CobB/CobQ-like glutamine amidotransferase domain DX05_RS05070 PF08353 Domain of unknown function (DUF1727) DX05_RS05070 PF08245 Mur ligase middle domain DX05_RS05075 PF02457 DisA bacterial checkpoint controller nucleotide-binding DX05_RS05085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DX05_RS05085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DX05_RS05085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DX05_RS05085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DX05_RS05105 PF04055 Radical SAM superfamily DX05_RS05105 PF06969 HemN C-terminal domain DX05_RS05115 PF13344 Haloacid dehalogenase-like hydrolase DX05_RS05125 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 DX05_RS05125 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 DX05_RS05125 PF13395 HNH endonuclease DX05_RS05125 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 DX05_RS05130 PF01867 CRISPR associated protein Cas1 DX05_RS05135 PF09827 CRISPR associated protein Cas2 DX05_RS05140 PF09711 CRISPR-associated protein (Cas_Csn2) DX05_RS05145 PF00334 Nucleoside diphosphate kinase DX05_RS05150 PF06421 GTP-binding protein LepA C-terminus DX05_RS05150 PF00679 Elongation factor G C-terminus DX05_RS05150 PF00009 Elongation factor Tu GTP binding domain DX05_RS05150 PF03144 Elongation factor Tu domain 2 DX05_RS05160 PF01966 HD domain DX05_RS05165 PF13673 Acetyltransferase (GNAT) domain DX05_RS05170 PF01641 SelR domain DX05_RS05175 PF00689 Cation transporting ATPase, C-terminus DX05_RS05175 PF00690 Cation transporter/ATPase, N-terminus DX05_RS05185 PF00132 Bacterial transferase hexapeptide (six repeats) DX05_RS05210 PF00005 ABC transporter DX05_RS05215 PF00392 Bacterial regulatory proteins, gntR family DX05_RS05220 PF02811 PHP domain DX05_RS05220 PF01336 OB-fold nucleic acid binding domain DX05_RS05220 PF14579 Helix-hairpin-helix motif DX05_RS05220 PF07733 Bacterial DNA polymerase III alpha NTPase domain DX05_RS05220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DX05_RS05225 PF00365 Phosphofructokinase DX05_RS05230 PF02887 Pyruvate kinase, alpha/beta domain DX05_RS05230 PF00224 Pyruvate kinase, barrel domain DX05_RS05235 PF10502 Signal peptidase, peptidase S26 DX05_RS05240 PF01380 SIS domain DX05_RS05245 PF08274 PhnA Zinc-Ribbon DX05_RS05245 PF03831 PhnA domain DX05_RS05250 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS05255 PF00005 ABC transporter DX05_RS05270 PF01649 Ribosomal protein S20 DX05_RS05275 PF00485 Phosphoribulokinase / Uridine kinase family DX05_RS05280 PF05175 Methyltransferase small domain DX05_RS05285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DX05_RS05290 PF02608 ABC transporter substrate-binding protein PnrA-like DX05_RS05295 PF00005 ABC transporter DX05_RS05300 PF02653 Branched-chain amino acid transport system / permease component DX05_RS05305 PF02653 Branched-chain amino acid transport system / permease component DX05_RS05310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DX05_RS05310 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS05315 PF00056 lactate/malate dehydrogenase, NAD binding domain DX05_RS05315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DX05_RS05320 PF00521 DNA gyrase/topoisomerase IV, subunit A DX05_RS05320 PF03989 DNA gyrase C-terminal domain, beta-propeller DX05_RS05325 PF04203 Sortase domain DX05_RS05330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DX05_RS05335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS05345 PF00999 Sodium/hydrogen exchanger family DX05_RS05355 PF02540 NAD synthase DX05_RS05355 PF00117 Glutamine amidotransferase class-I DX05_RS05355 PF00958 GMP synthase C terminal domain DX05_RS05360 PF00392 Bacterial regulatory proteins, gntR family DX05_RS05360 PF07702 UTRA domain DX05_RS05365 PF01134 Glucose inhibited division protein A DX05_RS05375 PF03180 NLPA lipoprotein DX05_RS05385 PF03572 Peptidase family S41 DX05_RS05390 PF00005 ABC transporter DX05_RS05400 PF00486 Transcriptional regulatory protein, C terminal DX05_RS05400 PF00072 Response regulator receiver domain DX05_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS05410 PF00589 Phage integrase family DX05_RS05410 PF13495 Phage integrase, N-terminal SAM-like domain DX05_RS05415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DX05_RS05430 PF02978 Signal peptide binding domain DX05_RS05430 PF02881 SRP54-type protein, helical bundle domain DX05_RS05430 PF00448 SRP54-type protein, GTPase domain DX05_RS05435 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DX05_RS05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS05440 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS05445 PF00486 Transcriptional regulatory protein, C terminal DX05_RS05445 PF00072 Response regulator receiver domain DX05_RS05450 PF11838 ERAP1-like C-terminal domain DX05_RS05450 PF01433 Peptidase family M1 domain DX05_RS05455 PF01895 PhoU domain DX05_RS05460 PF00005 ABC transporter DX05_RS05465 PF00005 ABC transporter DX05_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS05475 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS05480 PF12849 PBP superfamily domain DX05_RS05485 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DX05_RS05485 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DX05_RS05485 PF01189 16S rRNA methyltransferase RsmB/F DX05_RS05490 PF00459 Inositol monophosphatase family DX05_RS05495 PF05256 Uncharacterised protein family (UPF0223) DX05_RS05500 PF03960 ArsC family DX05_RS05505 PF06574 FAD synthetase DX05_RS05505 PF01687 Riboflavin kinase DX05_RS05510 PF01509 TruB family pseudouridylate synthase (N terminal domain) DX05_RS05510 PF16198 tRNA pseudouridylate synthase B C-terminal domain DX05_RS05540 PF00005 ABC transporter DX05_RS05545 PF01751 Toprim domain DX05_RS05545 PF01396 Topoisomerase DNA binding C4 zinc finger DX05_RS05545 PF01131 DNA topoisomerase DX05_RS05550 PF18255 DNA processing protein A sterile alpha motif domain DX05_RS05550 PF02481 DNA recombination-mediator protein A DX05_RS05555 PF01497 Periplasmic binding protein DX05_RS05560 PF00005 ABC transporter DX05_RS05565 PF01032 FecCD transport family DX05_RS05570 PF01032 FecCD transport family DX05_RS05575 PF01032 FecCD transport family DX05_RS05580 PF12464 Maltose acetyltransferase DX05_RS05580 PF14602 Hexapeptide repeat of succinyl-transferase DX05_RS05585 PF01351 Ribonuclease HII DX05_RS05590 PF01926 50S ribosome-binding GTPase DX05_RS05595 PF03734 L,D-transpeptidase catalytic domain DX05_RS05600 PF02554 Carbon starvation protein CstA DX05_RS05605 PF04397 LytTr DNA-binding domain DX05_RS05605 PF00072 Response regulator receiver domain DX05_RS05610 PF13492 GAF domain DX05_RS05610 PF06580 Histidine kinase DX05_RS05610 PF07694 5TMR of 5TMR-LYT DX05_RS05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS05685 PF12538 DNA transporter DX05_RS05685 PF01580 FtsK/SpoIIIE family DX05_RS05695 PF10140 WXG100 protein secretion system (Wss), protein YukC DX05_RS05720 PF06013 Proteins of 100 residues with WXG DX05_RS05735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DX05_RS05735 PF02142 MGS-like domain DX05_RS05735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DX05_RS05740 PF00117 Glutamine amidotransferase class-I DX05_RS05740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DX05_RS05745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DX05_RS05745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DX05_RS05750 PF01979 Amidohydrolase family DX05_RS05755 PF00156 Phosphoribosyl transferase domain DX05_RS05760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DX05_RS05770 PF12848 ABC transporter DX05_RS05770 PF00005 ABC transporter DX05_RS05780 PF01118 Semialdehyde dehydrogenase, NAD binding domain DX05_RS05780 PF02774 Semialdehyde dehydrogenase, dimerisation domain DX05_RS05790 PF13091 PLD-like domain DX05_RS05795 PF01268 Formate--tetrahydrofolate ligase DX05_RS05800 PF03099 Biotin/lipoate A/B protein ligase family DX05_RS05800 PF10437 Bacterial lipoate protein ligase C-terminus DX05_RS05810 PF01661 Macro domain DX05_RS05815 PF01597 Glycine cleavage H-protein DX05_RS05825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DX05_RS05830 PF03099 Biotin/lipoate A/B protein ligase family DX05_RS05840 PF02441 Flavoprotein DX05_RS05845 PF12822 ECF transporter, substrate-specific component DX05_RS05850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DX05_RS05850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DX05_RS05850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DX05_RS05850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DX05_RS05860 PF13276 HTH-like domain DX05_RS05860 PF13333 Integrase core domain DX05_RS05860 PF00665 Integrase core domain DX05_RS05870 PF00664 ABC transporter transmembrane region DX05_RS05870 PF00005 ABC transporter DX05_RS05875 PF00664 ABC transporter transmembrane region DX05_RS05875 PF00005 ABC transporter DX05_RS05890 PF00464 Serine hydroxymethyltransferase DX05_RS05900 PF05175 Methyltransferase small domain DX05_RS05905 PF00472 RF-1 domain DX05_RS05905 PF03462 PCRF domain DX05_RS05910 PF00265 Thymidine kinase DX05_RS05915 PF01361 Tautomerase enzyme DX05_RS05920 PF02424 ApbE family DX05_RS05925 PF03358 NADPH-dependent FMN reductase DX05_RS05925 PF04205 FMN-binding domain DX05_RS05925 PF00890 FAD binding domain DX05_RS05930 PF00890 FAD binding domain DX05_RS05930 PF04205 FMN-binding domain DX05_RS05930 PF03358 NADPH-dependent FMN reductase DX05_RS05940 PF00860 Permease family DX05_RS05945 PF00156 Phosphoribosyl transferase domain DX05_RS05950 PF00478 IMP dehydrogenase / GMP reductase domain DX05_RS05955 PF07690 Major Facilitator Superfamily DX05_RS05965 PF02705 K+ potassium transporter DX05_RS05970 PF00106 short chain dehydrogenase DX05_RS05975 PF01515 Phosphate acetyl/butaryl transferase DX05_RS05980 PF00849 RNA pseudouridylate synthase DX05_RS05985 PF01513 ATP-NAD kinase DX05_RS05990 PF04607 Region found in RelA / SpoT proteins DX05_RS06000 PF14572 Phosphoribosyl synthetase-associated domain DX05_RS06000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DX05_RS06005 PF00266 Aminotransferase class-V DX05_RS06015 PF06971 Putative DNA-binding protein N-terminus DX05_RS06015 PF02629 CoA binding domain DX05_RS06020 PF04002 RadC-like JAB domain DX05_RS06025 PF01594 AI-2E family transporter DX05_RS06045 PF12852 Cupin DX05_RS06045 PF12833 Helix-turn-helix domain DX05_RS06050 PF00654 Voltage gated chloride channel DX05_RS06055 PF13416 Bacterial extracellular solute-binding protein DX05_RS06060 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS06070 PF08402 TOBE domain DX05_RS06070 PF00005 ABC transporter DX05_RS06075 PF01565 FAD binding domain DX05_RS06075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DX05_RS06080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DX05_RS06085 PF02152 Dihydroneopterin aldolase DX05_RS06090 PF00809 Pterin binding enzyme DX05_RS06095 PF01227 GTP cyclohydrolase I DX05_RS06100 PF02875 Mur ligase family, glutamate ligase domain DX05_RS06100 PF08245 Mur ligase middle domain DX05_RS06105 PF00892 EamA-like transporter family DX05_RS06110 PF00288 GHMP kinases N terminal domain DX05_RS06110 PF08544 GHMP kinases C terminal DX05_RS06115 PF03447 Homoserine dehydrogenase, NAD binding domain DX05_RS06115 PF00742 Homoserine dehydrogenase DX05_RS06120 PF01522 Polysaccharide deacetylase DX05_RS06130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS06135 PF02028 BCCT, betaine/carnitine/choline family transporter DX05_RS06140 PF00171 Aldehyde dehydrogenase family DX05_RS06145 PF03601 Conserved hypothetical protein 698 DX05_RS06170 PF08534 Redoxin DX05_RS06190 PF03780 Asp23 family, cell envelope-related function DX05_RS06195 PF05532 CsbD-like DX05_RS06200 PF03780 Asp23 family, cell envelope-related function DX05_RS06215 PF04226 Transglycosylase associated protein DX05_RS06220 PF00580 UvrD/REP helicase N-terminal domain DX05_RS06220 PF13361 UvrD-like helicase C-terminal domain DX05_RS06235 PF00860 Permease family DX05_RS06240 PF01235 Sodium:alanine symporter family DX05_RS06245 PF01545 Cation efflux family DX05_RS06245 PF16916 Dimerisation domain of Zinc Transporter DX05_RS06250 PF03788 LrgA family DX05_RS06255 PF04172 LrgB-like family DX05_RS06290 PF00589 Phage integrase family DX05_RS06290 PF02899 Phage integrase, N-terminal SAM-like domain DX05_RS06305 PF00575 S1 RNA binding domain DX05_RS06325 PF01063 Amino-transferase class IV DX05_RS06330 PF00521 DNA gyrase/topoisomerase IV, subunit A DX05_RS06330 PF03989 DNA gyrase C-terminal domain, beta-propeller DX05_RS06335 PF00986 DNA gyrase B subunit, carboxyl terminus DX05_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS06335 PF01751 Toprim domain DX05_RS06335 PF00204 DNA gyrase B DX05_RS06340 PF02660 Glycerol-3-phosphate acyltransferase DX05_RS06345 PF03167 Uracil DNA glycosylase superfamily DX05_RS06355 PF13472 GDSL-like Lipase/Acylhydrolase family DX05_RS06355 PF02348 Cytidylyltransferase DX05_RS06365 PF02350 UDP-N-acetylglucosamine 2-epimerase DX05_RS06370 PF08666 SAF domain DX05_RS06370 PF03102 NeuB family DX05_RS06375 PF01943 Polysaccharide biosynthesis protein DX05_RS06395 PF01501 Glycosyl transferase family 8 DX05_RS06395 PF00535 Glycosyl transferase family 2 DX05_RS06400 PF01501 Glycosyl transferase family 8 DX05_RS06400 PF00535 Glycosyl transferase family 2 DX05_RS06410 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DX05_RS06410 PF04101 Glycosyltransferase family 28 C-terminal domain DX05_RS06415 PF04101 Glycosyltransferase family 28 C-terminal domain DX05_RS06415 PF03033 Glycosyltransferase family 28 N-terminal domain DX05_RS06420 PF02397 Bacterial sugar transferase DX05_RS06425 PF13614 AAA domain DX05_RS06430 PF02706 Chain length determinant protein DX05_RS06440 PF03816 Cell envelope-related transcriptional attenuator domain DX05_RS06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DX05_RS06445 PF03466 LysR substrate binding domain DX05_RS06455 PF01048 Phosphorylase superfamily DX05_RS06460 PF00654 Voltage gated chloride channel DX05_RS06465 PF01048 Phosphorylase superfamily DX05_RS06470 PF03960 ArsC family DX05_RS06475 PF01676 Metalloenzyme superfamily DX05_RS06480 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DX05_RS06490 PF00756 Putative esterase DX05_RS06495 PF17770 Ribonuclease J C-terminal domain DX05_RS06495 PF00753 Metallo-beta-lactamase superfamily DX05_RS06495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DX05_RS06500 PF08402 TOBE domain DX05_RS06500 PF00005 ABC transporter DX05_RS06515 PF05670 NFACT protein RNA binding domain DX05_RS06520 PF03306 Alpha-acetolactate decarboxylase DX05_RS06525 PF00205 Thiamine pyrophosphate enzyme, central domain DX05_RS06525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DX05_RS06525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DX05_RS06535 PF01594 AI-2E family transporter DX05_RS06545 PF00293 NUDIX domain DX05_RS06550 PF02278 Polysaccharide lyase family 8, super-sandwich domain DX05_RS06550 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DX05_RS06550 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DX05_RS06555 PF16363 GDP-mannose 4,6 dehydratase DX05_RS06560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DX05_RS06565 PF00483 Nucleotidyl transferase DX05_RS06570 PF01266 FAD dependent oxidoreductase DX05_RS06575 PF01784 NIF3 (NGG1p interacting factor 3) DX05_RS06580 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DX05_RS06590 PF00156 Phosphoribosyl transferase domain DX05_RS06600 PF01368 DHH family DX05_RS06600 PF17768 RecJ OB domain DX05_RS06600 PF02272 DHHA1 domain DX05_RS06600 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DX05_RS06605 PF00106 short chain dehydrogenase DX05_RS06610 PF12706 Beta-lactamase superfamily domain DX05_RS06610 PF00753 Metallo-beta-lactamase superfamily DX05_RS06620 PF01926 50S ribosome-binding GTPase DX05_RS06620 PF13167 GTP-binding GTPase N-terminal DX05_RS06620 PF16360 GTP-binding GTPase Middle Region DX05_RS06650 PF03714 Bacterial pullanase-associated domain DX05_RS06650 PF18494 Pullulanase Ins domain DX05_RS06650 PF17967 Pullulanase N2 domain DX05_RS06650 PF11852 Domain of unknown function (DUF3372) DX05_RS06650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DX05_RS06660 PF03167 Uracil DNA glycosylase superfamily DX05_RS06665 PF01546 Peptidase family M20/M25/M40 DX05_RS06670 PF00881 Nitroreductase family DX05_RS06675 PF03009 Glycerophosphoryl diester phosphodiesterase family DX05_RS06680 PF02151 UvrB/uvrC motif DX05_RS06680 PF08459 UvrC Helix-hairpin-helix N-terminal DX05_RS06680 PF01541 GIY-YIG catalytic domain DX05_RS06685 PF02677 Epoxyqueuosine reductase QueH DX05_RS06690 PF01554 MatE DX05_RS06725 PF13276 HTH-like domain DX05_RS06725 PF00665 Integrase core domain DX05_RS06725 PF13333 Integrase core domain DX05_RS06735 PF01610 Transposase DX05_RS06735 PF13683 Integrase core domain DX05_RS06745 PF01297 Zinc-uptake complex component A periplasmic DX05_RS06750 PF13808 DDE_Tnp_1-associated DX05_RS06750 PF01609 Transposase DDE domain DX05_RS06755 PF06280 Fn3-like domain DX05_RS06755 PF00082 Subtilase family DX05_RS06755 PF02225 PA domain DX05_RS06775 PF00929 Exonuclease DX05_RS06775 PF02811 PHP domain DX05_RS06775 PF14579 Helix-hairpin-helix motif DX05_RS06775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DX05_RS06775 PF07733 Bacterial DNA polymerase III alpha NTPase domain DX05_RS06775 PF11490 DNA polymerase III polC-type N-terminus II DX05_RS06785 PF00589 Phage integrase family DX05_RS06785 PF13495 Phage integrase, N-terminal SAM-like domain DX05_RS06840 PF00542 Ribosomal protein L7/L12 C-terminal domain DX05_RS06840 PF16320 Ribosomal protein L7/L12 dimerisation domain DX05_RS06845 PF00466 Ribosomal protein L10 DX05_RS06850 PF07724 AAA domain (Cdc48 subfamily) DX05_RS06850 PF10431 C-terminal, D2-small domain, of ClpB protein DX05_RS06850 PF00004 ATPase family associated with various cellular activities (AAA) DX05_RS06850 PF17871 AAA lid domain DX05_RS06855 PF02574 Homocysteine S-methyltransferase DX05_RS06880 PF01926 50S ribosome-binding GTPase DX05_RS06885 PF06689 ClpX C4-type zinc finger DX05_RS06885 PF10431 C-terminal, D2-small domain, of ClpB protein DX05_RS06885 PF07724 AAA domain (Cdc48 subfamily) DX05_RS06895 PF00186 Dihydrofolate reductase DX05_RS06900 PF00303 Thymidylate synthase DX05_RS06905 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DX05_RS06905 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DX05_RS06910 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DX05_RS06920 PF03006 Haemolysin-III related DX05_RS06925 PF00781 Diacylglycerol kinase catalytic domain DX05_RS06940 PF01070 FMN-dependent dehydrogenase DX05_RS06945 PF08544 GHMP kinases C terminal DX05_RS06945 PF00288 GHMP kinases N terminal domain DX05_RS06955 PF00288 GHMP kinases N terminal domain DX05_RS06955 PF08544 GHMP kinases C terminal DX05_RS06955 PF10509 Galactokinase galactose-binding signature DX05_RS06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS06960 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS06965 PF00072 Response regulator receiver domain DX05_RS06965 PF00486 Transcriptional regulatory protein, C terminal DX05_RS06970 PF04607 Region found in RelA / SpoT proteins DX05_RS06975 PF00005 ABC transporter DX05_RS06975 PF00664 ABC transporter transmembrane region DX05_RS06980 PF00005 ABC transporter DX05_RS06980 PF00664 ABC transporter transmembrane region DX05_RS06990 PF17936 Bacterial Ig domain DX05_RS06990 PF02872 5'-nucleotidase, C-terminal domain DX05_RS06990 PF00149 Calcineurin-like phosphoesterase DX05_RS06995 PF01327 Polypeptide deformylase DX05_RS07000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DX05_RS07000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DX05_RS07010 PF00664 ABC transporter transmembrane region DX05_RS07010 PF00005 ABC transporter DX05_RS07015 PF00005 ABC transporter DX05_RS07015 PF00664 ABC transporter transmembrane region DX05_RS07025 PF12848 ABC transporter DX05_RS07025 PF16326 ABC transporter C-terminal domain DX05_RS07025 PF00005 ABC transporter DX05_RS07030 PF12627 Probable RNA and SrmB- binding site of polymerase A DX05_RS07030 PF01743 Poly A polymerase head domain DX05_RS07030 PF13735 tRNA nucleotidyltransferase domain 2 putative DX05_RS07035 PF02645 Uncharacterised protein, DegV family COG1307 DX05_RS07045 PF13808 DDE_Tnp_1-associated DX05_RS07045 PF01609 Transposase DDE domain DX05_RS07060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DX05_RS07060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DX05_RS07065 PF00294 pfkB family carbohydrate kinase DX05_RS07070 PF00455 DeoR C terminal sensor domain DX05_RS07070 PF08220 DeoR-like helix-turn-helix domain DX05_RS07085 PF08546 Ketopantoate reductase PanE/ApbA C terminal DX05_RS07085 PF02558 Ketopantoate reductase PanE/ApbA DX05_RS07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS07100 PF01746 tRNA (Guanine-1)-methyltransferase DX05_RS07105 PF05239 PRC-barrel domain DX05_RS07105 PF01782 RimM N-terminal domain DX05_RS07130 PF00886 Ribosomal protein S16 DX05_RS07135 PF02687 FtsX-like permease family DX05_RS07135 PF12704 MacB-like periplasmic core domain DX05_RS07140 PF00005 ABC transporter DX05_RS07145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DX05_RS07150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DX05_RS07150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DX05_RS07150 PF02142 MGS-like domain DX05_RS07155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DX05_RS07155 PF00117 Glutamine amidotransferase class-I DX05_RS07160 PF00156 Phosphoribosyl transferase domain DX05_RS07165 PF01479 S4 domain DX05_RS07165 PF00849 RNA pseudouridylate synthase DX05_RS07170 PF01252 Signal peptidase (SPase) II DX05_RS07175 PF03466 LysR substrate binding domain DX05_RS07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DX05_RS07180 PF01016 Ribosomal L27 protein DX05_RS07190 PF00829 Ribosomal prokaryotic L21 protein DX05_RS07200 PF02926 THUMP domain DX05_RS07200 PF02568 Thiamine biosynthesis protein (ThiI) DX05_RS07205 PF00266 Aminotransferase class-V DX05_RS07215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DX05_RS07215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS07220 PF06133 Control of competence regulator ComK, YlbF/YmcA DX05_RS07225 PF01264 Chorismate synthase DX05_RS07230 PF01761 3-dehydroquinate synthase DX05_RS07235 PF01487 Type I 3-dehydroquinase DX05_RS07240 PF17785 PUA-like domain DX05_RS07240 PF10672 S-adenosylmethionine-dependent methyltransferase DX05_RS07245 PF00884 Sulfatase DX05_RS07250 PF00453 Ribosomal protein L20 DX05_RS07255 PF01632 Ribosomal protein L35 DX05_RS07260 PF00707 Translation initiation factor IF-3, C-terminal domain DX05_RS07260 PF05198 Translation initiation factor IF-3, N-terminal domain DX05_RS07265 PF02224 Cytidylate kinase DX05_RS07285 PF07687 Peptidase dimerisation domain DX05_RS07285 PF01546 Peptidase family M20/M25/M40 DX05_RS07290 PF14667 Polysaccharide biosynthesis C-terminal domain DX05_RS07290 PF01943 Polysaccharide biosynthesis protein DX05_RS07295 PF02875 Mur ligase family, glutamate ligase domain DX05_RS07295 PF08245 Mur ligase middle domain DX05_RS07300 PF00005 ABC transporter DX05_RS07305 PF01497 Periplasmic binding protein DX05_RS07310 PF01032 FecCD transport family DX05_RS07315 PF01032 FecCD transport family DX05_RS07325 PF02833 DHHA2 domain DX05_RS07325 PF01368 DHH family DX05_RS07330 PF04055 Radical SAM superfamily DX05_RS07335 PF03471 Transporter associated domain DX05_RS07335 PF00571 CBS domain DX05_RS07335 PF01595 Cyclin M transmembrane N-terminal domain DX05_RS07340 PF06962 Putative rRNA methylase DX05_RS07345 PF04055 Radical SAM superfamily DX05_RS07345 PF16199 Radical_SAM C-terminal domain DX05_RS07350 PF01569 PAP2 superfamily DX05_RS07355 PF12822 ECF transporter, substrate-specific component DX05_RS07390 PF00534 Glycosyl transferases group 1 DX05_RS07390 PF08323 Starch synthase catalytic domain DX05_RS07395 PF00535 Glycosyl transferase family 2 DX05_RS07400 PF01943 Polysaccharide biosynthesis protein DX05_RS07400 PF14667 Polysaccharide biosynthesis C-terminal domain DX05_RS07410 PF00535 Glycosyl transferase family 2 DX05_RS07415 PF00535 Glycosyl transferase family 2 DX05_RS07415 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DX05_RS07425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DX05_RS07430 PF04991 LicD family DX05_RS07445 PF00535 Glycosyl transferase family 2 DX05_RS07450 PF00535 Glycosyl transferase family 2 DX05_RS07460 PF04321 RmlD substrate binding domain DX05_RS07465 PF01883 Iron-sulfur cluster assembly protein DX05_RS07470 PF03979 Sigma-70 factor, region 1.1 DX05_RS07470 PF04542 Sigma-70 region 2 DX05_RS07470 PF00140 Sigma-70 factor, region 1.2 DX05_RS07470 PF04545 Sigma-70, region 4 DX05_RS07470 PF04539 Sigma-70 region 3 DX05_RS07475 PF01807 CHC2 zinc finger DX05_RS07475 PF10410 DnaB-helicase binding domain of primase DX05_RS07475 PF08275 DNA primase catalytic core, N-terminal domain DX05_RS07480 PF01741 Large-conductance mechanosensitive channel, MscL DX05_RS07485 PF01165 Ribosomal protein S21 DX05_RS07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 DX05_RS07510 PF12368 Rhodanase C-terminal DX05_RS07510 PF17773 UPF0176 acylphosphatase like domain DX05_RS07510 PF00581 Rhodanese-like domain DX05_RS07520 PF07690 Major Facilitator Superfamily DX05_RS07530 PF00343 Carbohydrate phosphorylase DX05_RS07535 PF02446 4-alpha-glucanotransferase DX05_RS07540 PF00356 Bacterial regulatory proteins, lacI family DX05_RS07540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DX05_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS07555 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS07560 PF00854 POT family DX05_RS07580 PF00534 Glycosyl transferases group 1 DX05_RS07585 PF07516 SecA Wing and Scaffold domain DX05_RS07585 PF07517 SecA DEAD-like domain DX05_RS07585 PF01043 SecA preprotein cross-linking domain DX05_RS07595 PF16929 Accessory Sec system GspB-transporter DX05_RS07600 PF16993 Accessory Sec system protein Asp1 DX05_RS07605 PF00344 SecY translocase DX05_RS07610 PF01501 Glycosyl transferase family 8 DX05_RS07610 PF08759 Glycosyltransferase GT-D fold DX05_RS07615 PF00535 Glycosyl transferase family 2 DX05_RS07615 PF01501 Glycosyl transferase family 8 DX05_RS07620 PF01501 Glycosyl transferase family 8 DX05_RS07620 PF08759 Glycosyltransferase GT-D fold DX05_RS07625 PF00535 Glycosyl transferase family 2 DX05_RS07625 PF01501 Glycosyl transferase family 8 DX05_RS07630 PF01501 Glycosyl transferase family 8 DX05_RS07630 PF08759 Glycosyltransferase GT-D fold DX05_RS07640 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DX05_RS07640 PF17210 SdrD B-like domain DX05_RS07640 PF17961 Bacterial Ig domain DX05_RS07640 PF04650 YSIRK type signal peptide DX05_RS07640 PF00746 LPXTG cell wall anchor motif DX05_RS07650 PF04851 Type III restriction enzyme, res subunit DX05_RS07650 PF12344 Ultra-violet resistance protein B DX05_RS07650 PF02151 UvrB/uvrC motif DX05_RS07650 PF00271 Helicase conserved C-terminal domain DX05_RS07650 PF17757 UvrB interaction domain DX05_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS07665 PF00005 ABC transporter DX05_RS07685 PF01018 GTP1/OBG DX05_RS07685 PF09269 Domain of unknown function (DUF1967) DX05_RS07685 PF01926 50S ribosome-binding GTPase DX05_RS07695 PF02073 Thermophilic metalloprotease (M29) DX05_RS07705 PF01425 Amidase DX05_RS07710 PF01479 S4 domain DX05_RS07710 PF00849 RNA pseudouridylate synthase DX05_RS07715 PF00248 Aldo/keto reductase family DX05_RS07720 PF00881 Nitroreductase family DX05_RS07725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DX05_RS07730 PF00535 Glycosyl transferase family 2 DX05_RS07735 PF00324 Amino acid permease DX05_RS07740 PF01668 SmpB protein DX05_RS07745 PF17876 Cold shock domain DX05_RS07745 PF00575 S1 RNA binding domain DX05_RS07745 PF00773 RNB domain DX05_RS07745 PF08206 Ribonuclease B OB domain DX05_RS07755 PF00083 Sugar (and other) transporter DX05_RS07755 PF07690 Major Facilitator Superfamily DX05_RS07765 PF13732 Domain of unknown function (DUF4162) DX05_RS07765 PF00005 ABC transporter DX05_RS07770 PF01121 Dephospho-CoA kinase DX05_RS07775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DX05_RS07775 PF06827 Zinc finger found in FPG and IleRS DX05_RS07775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DX05_RS07780 PF01381 Helix-turn-helix DX05_RS07815 PF01926 50S ribosome-binding GTPase DX05_RS07815 PF07650 KH domain DX05_RS07820 PF01219 Prokaryotic diacylglycerol kinase DX05_RS07825 PF02130 Uncharacterized protein family UPF0054 DX05_RS07835 PF00293 NUDIX domain DX05_RS07835 PF13344 Haloacid dehalogenase-like hydrolase DX05_RS07845 PF02562 PhoH-like protein DX05_RS07850 PF06100 MCRA family DX05_RS07855 PF06855 YozE SAM-like fold DX05_RS07860 PF01625 Peptide methionine sulfoxide reductase DX05_RS07870 PF01765 Ribosome recycling factor DX05_RS07875 PF00696 Amino acid kinase family DX05_RS07880 PF00005 ABC transporter DX05_RS07885 PF00005 ABC transporter DX05_RS07885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DX05_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS07890 PF12911 N-terminal TM domain of oligopeptide transport permease C DX05_RS07900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DX05_RS07905 PF00687 Ribosomal protein L1p/L10e family DX05_RS07910 PF00298 Ribosomal protein L11, RNA binding domain DX05_RS07910 PF03946 Ribosomal protein L11, N-terminal domain DX05_RS07920 PF07690 Major Facilitator Superfamily DX05_RS07925 PF07687 Peptidase dimerisation domain DX05_RS07925 PF01546 Peptidase family M20/M25/M40 DX05_RS07930 PF03466 LysR substrate binding domain DX05_RS07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DX05_RS07940 PF00425 chorismate binding enzyme DX05_RS07940 PF04715 Anthranilate synthase component I, N terminal region DX05_RS07945 PF17854 FtsK alpha domain DX05_RS07945 PF09397 Ftsk gamma domain DX05_RS07945 PF01580 FtsK/SpoIIIE family DX05_RS07950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DX05_RS07955 PF00950 ABC 3 transport family DX05_RS07960 PF00005 ABC transporter DX05_RS07965 PF01297 Zinc-uptake complex component A periplasmic DX05_RS07975 PF01048 Phosphorylase superfamily DX05_RS07985 PF00293 NUDIX domain DX05_RS07990 PF00132 Bacterial transferase hexapeptide (six repeats) DX05_RS07990 PF14602 Hexapeptide repeat of succinyl-transferase DX05_RS07990 PF12804 MobA-like NTP transferase domain DX05_RS08005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DX05_RS08005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DX05_RS08045 PF00535 Glycosyl transferase family 2 DX05_RS08070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS08075 PF05525 Branched-chain amino acid transport protein DX05_RS08080 PF01588 Putative tRNA binding domain DX05_RS08080 PF09334 tRNA synthetases class I (M) DX05_RS08085 PF09313 Domain of unknown function (DUF1971) DX05_RS08085 PF03848 Tellurite resistance protein TehB DX05_RS08100 PF02378 Phosphotransferase system, EIIC DX05_RS08110 PF03372 Endonuclease/Exonuclease/phosphatase family DX05_RS08120 PF03960 ArsC family DX05_RS08125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DX05_RS08125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DX05_RS08130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DX05_RS08130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DX05_RS08140 PF00266 Aminotransferase class-V DX05_RS08145 PF03932 CutC family DX05_RS08150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS08160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DX05_RS08165 PF06156 Initiation control protein YabA DX05_RS08170 PF09115 DNA polymerase III, delta subunit, C terminal DX05_RS08175 PF02223 Thymidylate kinase DX05_RS08180 PF00571 CBS domain DX05_RS08185 PF00005 ABC transporter DX05_RS08190 PF00005 ABC transporter DX05_RS08190 PF12399 Branched-chain amino acid ATP-binding cassette transporter DX05_RS08195 PF02653 Branched-chain amino acid transport system / permease component DX05_RS08195 PF11862 Domain of unknown function (DUF3382) DX05_RS08200 PF02653 Branched-chain amino acid transport system / permease component DX05_RS08210 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DX05_RS08215 PF00574 Clp protease DX05_RS08225 PF00155 Aminotransferase class I and II DX05_RS08230 PF00588 SpoU rRNA Methylase family DX05_RS08235 PF13520 Amino acid permease DX05_RS08240 PF02254 TrkA-N domain DX05_RS08240 PF02080 TrkA-C domain DX05_RS08245 PF02386 Cation transport protein DX05_RS08250 PF01809 Putative membrane protein insertion efficiency factor DX05_RS08255 PF00849 RNA pseudouridylate synthase DX05_RS08255 PF01479 S4 domain DX05_RS08260 PF04079 Segregation and condensation complex subunit ScpB DX05_RS08265 PF02616 Segregation and condensation protein ScpA DX05_RS08270 PF00589 Phage integrase family DX05_RS08285 PF01725 Ham1 family DX05_RS08290 PF01177 Asp/Glu/Hydantoin racemase DX05_RS08295 PF03672 Uncharacterised protein family (UPF0154) DX05_RS08305 PF02829 3H domain DX05_RS08305 PF08279 HTH domain DX05_RS08310 PF01027 Inhibitor of apoptosis-promoting Bax1 DX05_RS08320 PF00588 SpoU rRNA Methylase family DX05_RS08320 PF08032 RNA 2'-O ribose methyltransferase substrate binding DX05_RS08325 PF00708 Acylphosphatase DX05_RS08330 PF02096 60Kd inner membrane protein DX05_RS08335 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS08340 PF00497 Bacterial extracellular solute-binding proteins, family 3 DX05_RS08345 PF01425 Amidase DX05_RS08350 PF03449 Transcription elongation factor, N-terminal DX05_RS08350 PF01272 Transcription elongation factor, GreA/GreB, C-term DX05_RS08355 PF02618 YceG-like family DX05_RS08365 PF08245 Mur ligase middle domain DX05_RS08365 PF02875 Mur ligase family, glutamate ligase domain DX05_RS08365 PF01225 Mur ligase family, catalytic domain DX05_RS08375 PF00176 SNF2 family N-terminal domain DX05_RS08375 PF00271 Helicase conserved C-terminal domain DX05_RS08375 PF04434 SWIM zinc finger DX05_RS08380 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DX05_RS08380 PF01926 50S ribosome-binding GTPase DX05_RS08385 PF01695 IstB-like ATP binding protein DX05_RS08385 PF07319 Primosomal protein DnaI N-terminus DX05_RS08395 PF03477 ATP cone domain DX05_RS08400 PF18719 ArlS sensor domain DX05_RS08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS08400 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS08405 PF00486 Transcriptional regulatory protein, C terminal DX05_RS08405 PF00072 Response regulator receiver domain DX05_RS08415 PF01435 Peptidase family M48 DX05_RS08420 PF04011 LemA family DX05_RS08425 PF02527 rRNA small subunit methyltransferase G DX05_RS08430 PF02386 Cation transport protein DX05_RS08435 PF02254 TrkA-N domain DX05_RS08435 PF02080 TrkA-C domain DX05_RS08445 PF00005 ABC transporter DX05_RS08445 PF12558 ATP-binding cassette cobalt transporter DX05_RS08450 PF07155 ECF-type riboflavin transporter, S component DX05_RS08455 PF00375 Sodium:dicarboxylate symporter family DX05_RS08460 PF05525 Branched-chain amino acid transport protein DX05_RS08465 PF08240 Alcohol dehydrogenase GroES-like domain DX05_RS08465 PF00107 Zinc-binding dehydrogenase DX05_RS08465 PF13823 Alcohol dehydrogenase GroES-associated DX05_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS08480 PF00005 ABC transporter DX05_RS08480 PF09383 NIL domain DX05_RS08485 PF01546 Peptidase family M20/M25/M40 DX05_RS08485 PF07687 Peptidase dimerisation domain DX05_RS08490 PF03180 NLPA lipoprotein DX05_RS08495 PF00497 Bacterial extracellular solute-binding proteins, family 3 DX05_RS08500 PF07722 Peptidase C26 DX05_RS08505 PF01709 Transcriptional regulator DX05_RS08510 PF02733 Dak1 domain DX05_RS08515 PF00440 Bacterial regulatory proteins, tetR family DX05_RS08515 PF14278 Transcriptional regulator C-terminal region DX05_RS08520 PF02733 Dak1 domain DX05_RS08525 PF02734 DAK2 domain DX05_RS08530 PF03610 PTS system fructose IIA component DX05_RS08535 PF00230 Major intrinsic protein DX05_RS08545 PF13411 MerR HTH family regulatory protein DX05_RS08545 PF07739 TipAS antibiotic-recognition domain DX05_RS08550 PF05636 HIGH Nucleotidyl Transferase DX05_RS08560 PF13649 Methyltransferase domain DX05_RS08575 PF01966 HD domain DX05_RS08580 PF01467 Cytidylyltransferase-like DX05_RS08585 PF01985 CRS1 / YhbY (CRM) domain DX05_RS08590 PF01926 50S ribosome-binding GTPase DX05_RS08605 PF02637 GatB domain DX05_RS08605 PF02934 GatB/GatE catalytic domain DX05_RS08610 PF01425 Amidase DX05_RS08615 PF02686 Glu-tRNAGln amidotransferase C subunit DX05_RS08620 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DX05_RS08620 PF02896 PEP-utilising enzyme, TIM barrel domain DX05_RS08620 PF00391 PEP-utilising enzyme, mobile domain DX05_RS08625 PF03618 Kinase/pyrophosphorylase DX05_RS08630 PF08279 HTH domain DX05_RS08630 PF00571 CBS domain DX05_RS08635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DX05_RS08635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DX05_RS08635 PF00378 Enoyl-CoA hydratase/isomerase DX05_RS08640 PF00857 Isochorismatase family DX05_RS08645 PF08222 CodY helix-turn-helix domain DX05_RS08645 PF06018 CodY GAF-like domain DX05_RS08650 PF00155 Aminotransferase class I and II DX05_RS08655 PF00582 Universal stress protein family DX05_RS08665 PF00710 Asparaginase, N-terminal DX05_RS08665 PF17763 Glutaminase/Asparaginase C-terminal domain DX05_RS08670 PF08501 Shikimate dehydrogenase substrate binding domain DX05_RS08670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DX05_RS08675 PF00248 Aldo/keto reductase family DX05_RS08680 PF00271 Helicase conserved C-terminal domain DX05_RS08680 PF00270 DEAD/DEAH box helicase DX05_RS08680 PF17191 RecG wedge domain DX05_RS08685 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DX05_RS08685 PF05257 CHAP domain DX05_RS08690 PF01168 Alanine racemase, N-terminal domain DX05_RS08690 PF00842 Alanine racemase, C-terminal domain DX05_RS08695 PF01648 4'-phosphopantetheinyl transferase superfamily DX05_RS08700 PF00793 DAHP synthetase I family DX05_RS08705 PF02810 SEC-C motif DX05_RS08705 PF07517 SecA DEAD-like domain DX05_RS08705 PF01043 SecA preprotein cross-linking domain DX05_RS08705 PF07516 SecA Wing and Scaffold domain DX05_RS08710 PF01609 Transposase DDE domain DX05_RS08710 PF13808 DDE_Tnp_1-associated DX05_RS08715 PF01238 Phosphomannose isomerase type I DX05_RS08720 PF00480 ROK family DX05_RS08730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DX05_RS08730 PF00367 phosphotransferase system, EIIB DX05_RS08730 PF02378 Phosphotransferase system, EIIC DX05_RS08735 PF00251 Glycosyl hydrolases family 32 N-terminal domain DX05_RS08735 PF08244 Glycosyl hydrolases family 32 C terminal DX05_RS08740 PF00356 Bacterial regulatory proteins, lacI family DX05_RS08745 PF01029 NusB family DX05_RS08750 PF03780 Asp23 family, cell envelope-related function DX05_RS08755 PF01132 Elongation factor P (EF-P) OB domain DX05_RS08755 PF08207 Elongation factor P (EF-P) KOW-like domain DX05_RS08755 PF09285 Elongation factor P, C-terminal DX05_RS08760 PF00664 ABC transporter transmembrane region DX05_RS08760 PF00005 ABC transporter DX05_RS08765 PF00005 ABC transporter DX05_RS08765 PF00664 ABC transporter transmembrane region DX05_RS08790 PF00501 AMP-binding enzyme DX05_RS08790 PF13193 AMP-binding enzyme C-terminal domain DX05_RS08795 PF00501 AMP-binding enzyme DX05_RS08795 PF13193 AMP-binding enzyme C-terminal domain DX05_RS08805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DX05_RS08810 PF00557 Metallopeptidase family M24 DX05_RS08810 PF01321 Creatinase/Prolidase N-terminal domain DX05_RS08820 PF07690 Major Facilitator Superfamily DX05_RS08825 PF17755 UvrA DNA-binding domain DX05_RS08825 PF00005 ABC transporter DX05_RS08825 PF17760 UvrA interaction domain DX05_RS08840 PF01084 Ribosomal protein S18 DX05_RS08845 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS08850 PF00436 Single-strand binding protein family DX05_RS08855 PF01250 Ribosomal protein S6 DX05_RS08860 PF14815 NUDIX domain DX05_RS08860 PF00730 HhH-GPD superfamily base excision DNA repair protein DX05_RS08865 PF01381 Helix-turn-helix DX05_RS08870 PF00085 Thioredoxin DX05_RS08880 PF01713 Smr domain DX05_RS08880 PF00488 MutS domain V DX05_RS08895 PF01351 Ribonuclease HII DX05_RS08895 PF11858 Domain of unknown function (DUF3378) DX05_RS08900 PF10502 Signal peptidase, peptidase S26 DX05_RS08905 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DX05_RS08905 PF14490 Helix-hairpin-helix containing domain DX05_RS08905 PF13538 UvrD-like helicase C-terminal domain DX05_RS08920 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS08925 PF00817 impB/mucB/samB family DX05_RS08925 PF11798 IMS family HHH motif DX05_RS08925 PF11799 impB/mucB/samB family C-terminal domain DX05_RS08930 PF02901 Pyruvate formate lyase-like DX05_RS08930 PF01228 Glycine radical DX05_RS08935 PF01243 Pyridoxamine 5'-phosphate oxidase DX05_RS08940 PF00144 Beta-lactamase DX05_RS08955 PF00230 Major intrinsic protein DX05_RS08965 PF07690 Major Facilitator Superfamily DX05_RS08970 PF13545 Crp-like helix-turn-helix domain DX05_RS08975 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DX05_RS08975 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DX05_RS08975 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DX05_RS08985 PF00348 Polyprenyl synthetase DX05_RS08990 PF00005 ABC transporter DX05_RS08990 PF00664 ABC transporter transmembrane region DX05_RS08995 PF00005 ABC transporter DX05_RS08995 PF00664 ABC transporter transmembrane region DX05_RS09000 PF02322 Cytochrome bd terminal oxidase subunit II DX05_RS09005 PF01654 Cytochrome bd terminal oxidase subunit I DX05_RS09010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS09025 PF02575 YbaB/EbfC DNA-binding family DX05_RS09035 PF07739 TipAS antibiotic-recognition domain DX05_RS09035 PF13411 MerR HTH family regulatory protein DX05_RS09045 PF04394 Protein of unknown function, DUF536 DX05_RS09045 PF08279 HTH domain DX05_RS09060 PF00253 Ribosomal protein S14p/S29e DX05_RS09070 PF00814 Glycoprotease family DX05_RS09075 PF00583 Acetyltransferase (GNAT) family DX05_RS09080 PF00814 Glycoprotease family DX05_RS09085 PF07288 Protein of unknown function (DUF1447) DX05_RS09090 PF00753 Metallo-beta-lactamase superfamily DX05_RS09090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DX05_RS09090 PF17770 Ribonuclease J C-terminal domain DX05_RS09095 PF05257 CHAP domain DX05_RS09095 PF01476 LysM domain DX05_RS09100 PF00120 Glutamine synthetase, catalytic domain DX05_RS09100 PF03951 Glutamine synthetase, beta-Grasp domain DX05_RS09105 PF13411 MerR HTH family regulatory protein DX05_RS09120 PF00162 Phosphoglycerate kinase DX05_RS09125 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DX05_RS09130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DX05_RS09130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DX05_RS09135 PF00679 Elongation factor G C-terminus DX05_RS09135 PF14492 Elongation Factor G, domain II DX05_RS09135 PF03764 Elongation factor G, domain IV DX05_RS09135 PF00009 Elongation factor Tu GTP binding domain DX05_RS09135 PF03144 Elongation factor Tu domain 2 DX05_RS09140 PF00177 Ribosomal protein S7p/S5e DX05_RS09145 PF00164 Ribosomal protein S12/S23 DX05_RS09150 PF00156 Phosphoribosyl transferase domain DX05_RS09150 PF09182 Bacterial purine repressor, N-terminal DX05_RS09155 PF01336 OB-fold nucleic acid binding domain DX05_RS09155 PF01966 HD domain DX05_RS09160 PF02646 RmuC family DX05_RS09170 PF00834 Ribulose-phosphate 3 epimerase family DX05_RS09175 PF16745 RsgA N-terminal domain DX05_RS09175 PF03193 RsgA GTPase DX05_RS09180 PF08241 Methyltransferase domain DX05_RS09185 PF00398 Ribosomal RNA adenine dimethylase DX05_RS09195 PF13331 Domain of unknown function (DUF4093) DX05_RS09200 PF01026 TatD related DNase DX05_RS09225 PF04914 DltD protein DX05_RS09230 PF00550 Phosphopantetheine attachment site DX05_RS09235 PF03062 MBOAT, membrane-bound O-acyltransferase family DX05_RS09240 PF00501 AMP-binding enzyme DX05_RS09240 PF13193 AMP-binding enzyme C-terminal domain DX05_RS09250 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS09255 PF00486 Transcriptional regulatory protein, C terminal DX05_RS09255 PF00072 Response regulator receiver domain DX05_RS09260 PF01609 Transposase DDE domain DX05_RS09260 PF13808 DDE_Tnp_1-associated DX05_RS09265 PF00468 Ribosomal protein L34 DX05_RS09270 PF07670 Nucleoside recognition DX05_RS09275 PF00589 Phage integrase family DX05_RS09275 PF02920 DNA binding domain of tn916 integrase DX05_RS09280 PF09035 Excisionase from transposon Tn916 DX05_RS09300 PF01526 Tn3 transposase DDE domain DX05_RS09300 PF13700 Domain of unknown function (DUF4158) DX05_RS09305 PF00239 Resolvase, N terminal domain DX05_RS09305 PF02796 Helix-turn-helix domain of resolvase DX05_RS09310 PF00398 Ribosomal RNA adenine dimethylase DX05_RS09315 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) DX05_RS09325 PF00679 Elongation factor G C-terminus DX05_RS09325 PF14492 Elongation Factor G, domain II DX05_RS09325 PF03764 Elongation factor G, domain IV DX05_RS09325 PF00009 Elongation factor Tu GTP binding domain DX05_RS09335 PF00877 NlpC/P60 family DX05_RS09365 PF02486 Replication initiation factor DX05_RS09365 PF18106 Rolling Circle replication initiation protein N-terminal domain DX05_RS09385 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS09390 PF00571 CBS domain DX05_RS09390 PF00005 ABC transporter DX05_RS09395 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DX05_RS09395 PF09363 XFP C-terminal domain DX05_RS09395 PF09364 XFP N-terminal domain DX05_RS09415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DX05_RS09415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DX05_RS09425 PF03611 PTS system sugar-specific permease component DX05_RS09430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DX05_RS09430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DX05_RS09440 PF00356 Bacterial regulatory proteins, lacI family DX05_RS09445 PF00923 Transaldolase/Fructose-6-phosphate aldolase DX05_RS09450 PF00596 Class II Aldolase and Adducin N-terminal domain DX05_RS09455 PF01261 Xylose isomerase-like TIM barrel DX05_RS09460 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DX05_RS09465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DX05_RS09470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DX05_RS09475 PF03611 PTS system sugar-specific permease component DX05_RS09490 PF00709 Adenylosuccinate synthetase DX05_RS09505 PF04262 Glutamate-cysteine ligase DX05_RS09505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DX05_RS09505 PF18419 ATP-grasp-like domain DX05_RS09520 PF01430 Hsp33 protein DX05_RS09525 PF01207 Dihydrouridine synthase (Dus) DX05_RS09530 PF01712 Deoxynucleoside kinase DX05_RS09540 PF17871 AAA lid domain DX05_RS09540 PF07724 AAA domain (Cdc48 subfamily) DX05_RS09540 PF00004 ATPase family associated with various cellular activities (AAA) DX05_RS09540 PF10431 C-terminal, D2-small domain, of ClpB protein DX05_RS09540 PF02861 Clp amino terminal domain, pathogenicity island component DX05_RS09545 PF05848 CtsR N-terminal HTH domain DX05_RS09545 PF17727 CtsR C-terminal dimerization domain DX05_RS09555 PF00889 Elongation factor TS DX05_RS09560 PF00318 Ribosomal protein S2 DX05_RS09565 PF00578 AhpC/TSA family DX05_RS09570 PF13192 Thioredoxin domain DX05_RS09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase DX05_RS09595 PF12728 Helix-turn-helix domain DX05_RS09595 PF02661 Fic/DOC family DX05_RS09660 PF02486 Replication initiation factor DX05_RS09660 PF18106 Rolling Circle replication initiation protein N-terminal domain DX05_RS09670 PF02899 Phage integrase, N-terminal SAM-like domain DX05_RS09670 PF00589 Phage integrase family DX05_RS09685 PF02016 LD-carboxypeptidase N-terminal domain DX05_RS09685 PF17676 LD-carboxypeptidase C-terminal domain DX05_RS09690 PF05649 Peptidase family M13 DX05_RS09690 PF01431 Peptidase family M13 DX05_RS09695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DX05_RS09695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DX05_RS09710 PF01327 Polypeptide deformylase DX05_RS09715 PF00356 Bacterial regulatory proteins, lacI family DX05_RS09725 PF03613 PTS system mannose/fructose/sorbose family IID component DX05_RS09730 PF03609 PTS system sorbose-specific iic component DX05_RS09735 PF03830 PTS system sorbose subfamily IIB component DX05_RS09740 PF07470 Glycosyl Hydrolase Family 88 DX05_RS09745 PF03610 PTS system fructose IIA component DX05_RS09745 PF03830 PTS system sorbose subfamily IIB component DX05_RS09785 PF14579 Helix-hairpin-helix motif DX05_RS09785 PF11490 DNA polymerase III polC-type N-terminus II DX05_RS09785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DX05_RS09785 PF07733 Bacterial DNA polymerase III alpha NTPase domain DX05_RS09785 PF02811 PHP domain DX05_RS09785 PF14480 DNA polymerase III polC-type N-terminus I DX05_RS09785 PF00929 Exonuclease DX05_RS09790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DX05_RS09790 PF01476 LysM domain DX05_RS09795 PF04073 Aminoacyl-tRNA editing domain DX05_RS09795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DX05_RS09795 PF03129 Anticodon binding domain DX05_RS09800 PF13180 PDZ domain DX05_RS09800 PF02163 Peptidase family M50 DX05_RS09810 PF01255 Putative undecaprenyl diphosphate synthase DX05_RS09815 PF02699 Preprotein translocase subunit DX05_RS09830 PF00390 Malic enzyme, N-terminal domain DX05_RS09830 PF03949 Malic enzyme, NAD binding domain DX05_RS09835 PF03390 2-hydroxycarboxylate transporter family DX05_RS09840 PF17203 Single cache domain 3 DX05_RS09840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS09840 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DX05_RS09840 PF00989 PAS fold DX05_RS09845 PF00072 Response regulator receiver domain DX05_RS09850 PF16363 GDP-mannose 4,6 dehydratase DX05_RS09855 PF00128 Alpha amylase, catalytic domain DX05_RS09860 PF03459 TOBE domain DX05_RS09860 PF17912 MalK OB fold domain DX05_RS09860 PF00005 ABC transporter DX05_RS09865 PF13556 PucR C-terminal helix-turn-helix domain DX05_RS09870 PF01263 Aldose 1-epimerase DX05_RS09875 PF01791 DeoC/LacD family aldolase DX05_RS09880 PF00294 pfkB family carbohydrate kinase DX05_RS09885 PF02502 Ribose/Galactose Isomerase DX05_RS09890 PF02502 Ribose/Galactose Isomerase DX05_RS09895 PF02973 Sialidase, N-terminal domain DX05_RS09895 PF04650 YSIRK type signal peptide DX05_RS09895 PF13088 BNR repeat-like domain DX05_RS09915 PF08220 DeoR-like helix-turn-helix domain DX05_RS09915 PF00455 DeoR C terminal sensor domain DX05_RS09930 PF02580 D-Tyr-tRNA(Tyr) deacylase DX05_RS09935 PF04607 Region found in RelA / SpoT proteins DX05_RS09935 PF02824 TGS domain DX05_RS09935 PF13291 ACT domain DX05_RS09940 PF00149 Calcineurin-like phosphoesterase DX05_RS09940 PF02872 5'-nucleotidase, C-terminal domain DX05_RS09945 PF07972 NrdI Flavodoxin like DX05_RS09950 PF05343 M42 glutamyl aminopeptidase DX05_RS09970 PF00072 Response regulator receiver domain DX05_RS09970 PF12833 Helix-turn-helix domain DX05_RS09975 PF06580 Histidine kinase DX05_RS09975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS09980 PF03613 PTS system mannose/fructose/sorbose family IID component DX05_RS09985 PF03609 PTS system sorbose-specific iic component DX05_RS09990 PF03830 PTS system sorbose subfamily IIB component DX05_RS10000 PF00842 Alanine racemase, C-terminal domain DX05_RS10000 PF01757 Acyltransferase family DX05_RS10000 PF01168 Alanine racemase, N-terminal domain DX05_RS10010 PF00005 ABC transporter DX05_RS10010 PF13732 Domain of unknown function (DUF4162) DX05_RS10020 PF04397 LytTr DNA-binding domain DX05_RS10020 PF00072 Response regulator receiver domain DX05_RS10025 PF03372 Endonuclease/Exonuclease/phosphatase family DX05_RS10030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DX05_RS10030 PF00367 phosphotransferase system, EIIB DX05_RS10030 PF02378 Phosphotransferase system, EIIC DX05_RS10035 PF16736 Single Cache-like DX05_RS10035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS10035 PF00989 PAS fold DX05_RS10035 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS10040 PF00072 Response regulator receiver domain DX05_RS10040 PF00486 Transcriptional regulatory protein, C terminal DX05_RS10045 PF01895 PhoU domain DX05_RS10050 PF00005 ABC transporter DX05_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS10065 PF12849 PBP superfamily domain DX05_RS10075 PF04452 RNA methyltransferase DX05_RS10090 PF00293 NUDIX domain DX05_RS10110 PF00583 Acetyltransferase (GNAT) family DX05_RS10115 PF16193 AAA C-terminal domain DX05_RS10115 PF05496 Holliday junction DNA helicase RuvB P-loop domain DX05_RS10115 PF12002 MgsA AAA+ ATPase C terminal DX05_RS10155 PF04439 Streptomycin adenylyltransferase DX05_RS10185 PF00005 ABC transporter DX05_RS10185 PF13732 Domain of unknown function (DUF4162) DX05_RS10195 PF01381 Helix-turn-helix DX05_RS10200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS10215 PF03819 MazG nucleotide pyrophosphohydrolase domain DX05_RS10220 PF03641 Possible lysine decarboxylase DX05_RS10230 PF00581 Rhodanese-like domain DX05_RS10235 PF07373 CAMP factor (Cfa) DX05_RS10245 PF00465 Iron-containing alcohol dehydrogenase DX05_RS10255 PF13333 Integrase core domain DX05_RS10255 PF00665 Integrase core domain DX05_RS10255 PF13276 HTH-like domain DX05_RS10265 PF02574 Homocysteine S-methyltransferase DX05_RS10265 PF02219 Methylenetetrahydrofolate reductase DX05_RS10270 PF01717 Cobalamin-independent synthase, Catalytic domain DX05_RS10270 PF08267 Cobalamin-independent synthase, N-terminal domain DX05_RS10280 PF03591 AzlC protein DX05_RS10290 PF00072 Response regulator receiver domain DX05_RS10290 PF00486 Transcriptional regulatory protein, C terminal DX05_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS10295 PF00672 HAMP domain DX05_RS10295 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS10305 PF00133 tRNA synthetases class I (I, L, M and V) DX05_RS10305 PF13603 Leucyl-tRNA synthetase, Domain 2 DX05_RS10305 PF08264 Anticodon-binding domain of tRNA DX05_RS10305 PF09334 tRNA synthetases class I (M) DX05_RS10315 PF13808 DDE_Tnp_1-associated DX05_RS10315 PF01609 Transposase DDE domain DX05_RS10320 PF07690 Major Facilitator Superfamily DX05_RS10325 PF01734 Patatin-like phospholipase DX05_RS10330 PF00467 KOW motif DX05_RS10330 PF02357 Transcription termination factor nusG DX05_RS10335 PF17573 GA-like domain DX05_RS10335 PF00746 LPXTG cell wall anchor motif DX05_RS10335 PF01378 B domain DX05_RS10345 PF00912 Transglycosylase DX05_RS10345 PF00905 Penicillin binding protein transpeptidase domain DX05_RS10350 PF01479 S4 domain DX05_RS10350 PF00849 RNA pseudouridylate synthase DX05_RS10365 PF01676 Metalloenzyme superfamily DX05_RS10370 PF01791 DeoC/LacD family aldolase DX05_RS10375 PF07670 Nucleoside recognition DX05_RS10375 PF01773 Na+ dependent nucleoside transporter N-terminus DX05_RS10375 PF07662 Na+ dependent nucleoside transporter C-terminus DX05_RS10380 PF01048 Phosphorylase superfamily DX05_RS10395 PF00118 TCP-1/cpn60 chaperonin family DX05_RS10400 PF00166 Chaperonin 10 Kd subunit DX05_RS10405 PF00005 ABC transporter DX05_RS10410 PF02653 Branched-chain amino acid transport system / permease component DX05_RS10425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DX05_RS10430 PF03883 Peroxide stress protein YaaA DX05_RS10445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DX05_RS10455 PF13597 Anaerobic ribonucleoside-triphosphate reductase DX05_RS10455 PF03477 ATP cone domain DX05_RS10470 PF06949 Protein of unknown function (DUF1292) DX05_RS10475 PF03652 Holliday junction resolvase DX05_RS10480 PF06135 IreB regulatory phosphoprotein DX05_RS10485 PF03960 ArsC family DX05_RS10490 PF00154 recA bacterial DNA recombination protein DX05_RS10495 PF00994 Probable molybdopterin binding domain DX05_RS10495 PF02464 Competence-damaged protein DX05_RS10495 PF18146 Damage-inducible protein CinA KH domain DX05_RS10500 PF03352 Methyladenine glycosylase DX05_RS10505 PF01330 RuvA N terminal domain DX05_RS10505 PF07499 RuvA, C-terminal domain DX05_RS10515 PF01119 DNA mismatch repair protein, C-terminal domain DX05_RS10515 PF08676 MutL C terminal dimerisation domain DX05_RS10520 PF00313 'Cold-shock' DNA-binding domain DX05_RS10525 PF05192 MutS domain III DX05_RS10525 PF01624 MutS domain I DX05_RS10525 PF05190 MutS family domain IV DX05_RS10525 PF00488 MutS domain V DX05_RS10525 PF05188 MutS domain II DX05_RS10530 PF02863 Arginine repressor, C-terminal domain DX05_RS10530 PF01316 Arginine repressor, DNA binding domain DX05_RS10535 PF00750 tRNA synthetases class I (R) DX05_RS10535 PF05746 DALR anticodon binding domain DX05_RS10535 PF03485 Arginyl tRNA synthetase N terminal domain DX05_RS10545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DX05_RS10545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DX05_RS10550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DX05_RS10550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DX05_RS10555 PF02938 GAD domain DX05_RS10555 PF00152 tRNA synthetases class II (D, K and N) DX05_RS10555 PF01336 OB-fold nucleic acid binding domain DX05_RS10560 PF03129 Anticodon binding domain DX05_RS10560 PF13393 Histidyl-tRNA synthetase DX05_RS10565 PF01783 Ribosomal L32p protein family DX05_RS10570 PF00471 Ribosomal protein L33 DX05_RS10580 PF02899 Phage integrase, N-terminal SAM-like domain DX05_RS10580 PF00589 Phage integrase family DX05_RS10590 PF18106 Rolling Circle replication initiation protein N-terminal domain DX05_RS10590 PF02486 Replication initiation factor DX05_RS10620 PF02661 Fic/DOC family DX05_RS10620 PF12728 Helix-turn-helix domain DX05_RS10635 PF01022 Bacterial regulatory protein, arsR family DX05_RS10645 PF13276 HTH-like domain DX05_RS10645 PF13333 Integrase core domain DX05_RS10645 PF00665 Integrase core domain DX05_RS10685 PF02899 Phage integrase, N-terminal SAM-like domain DX05_RS10685 PF00589 Phage integrase family DX05_RS10695 PF00486 Transcriptional regulatory protein, C terminal DX05_RS10695 PF00072 Response regulator receiver domain DX05_RS10700 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS10705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS10710 PF03606 C4-dicarboxylate anaerobic carrier DX05_RS10715 PF00696 Amino acid kinase family DX05_RS10720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DX05_RS10720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DX05_RS10725 PF00989 PAS fold DX05_RS10725 PF00512 His Kinase A (phospho-acceptor) domain DX05_RS10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DX05_RS10730 PF00072 Response regulator receiver domain DX05_RS10730 PF08664 YcbB domain DX05_RS10735 PF00571 CBS domain DX05_RS10735 PF00005 ABC transporter DX05_RS10740 PF00528 Binding-protein-dependent transport system inner membrane component DX05_RS10745 PF09924 Uncharacterised conserved protein (DUF2156) DX05_RS10745 PF03706 Lysylphosphatidylglycerol synthase TM region DX05_RS10750 PF00561 alpha/beta hydrolase fold DX05_RS10755 PF06993 Protein of unknown function (DUF1304) DX05_RS10760 PF01061 ABC-2 type transporter DX05_RS10875 PF00589 Phage integrase family DX05_RS10875 PF14659 Phage integrase, N-terminal SAM-like domain DX05_RS10880 PF01479 S4 domain DX05_RS10880 PF00163 Ribosomal protein S4/S9 N-terminal domain DX05_RS10890 PF03796 DnaB-like helicase C terminal domain DX05_RS10890 PF00772 DnaB-like helicase N terminal domain DX05_RS10895 PF03948 Ribosomal protein L9, C-terminal domain DX05_RS10895 PF01281 Ribosomal protein L9, N-terminal domain DX05_RS10900 PF01368 DHH family DX05_RS10900 PF02272 DHHA1 domain DX05_RS10905 PF01134 Glucose inhibited division protein A DX05_RS10905 PF13932 GidA associated domain DX05_RS10910 PF13808 DDE_Tnp_1-associated DX05_RS10910 PF01609 Transposase DDE domain DX05_RS10915 PF01914 MarC family integral membrane protein DX05_RS10925 PF03315 Serine dehydratase beta chain DX05_RS10925 PF01842 ACT domain DX05_RS10930 PF03313 Serine dehydratase alpha chain DX05_RS10940 PF06737 Transglycosylase-like domain DX05_RS10945 PF05257 CHAP domain DX05_RS10945 PF01476 LysM domain DX05_RS10950 PF02361 Cobalt transport protein DX05_RS10955 PF00005 ABC transporter DX05_RS10960 PF00005 ABC transporter DX05_RS10965 PF01066 CDP-alcohol phosphatidyltransferase DX05_RS10970 PF00675 Insulinase (Peptidase family M16) DX05_RS10970 PF05193 Peptidase M16 inactive domain DX05_RS10975 PF05193 Peptidase M16 inactive domain DX05_RS10985 PF02463 RecF/RecN/SMC N terminal domain DX05_RS10995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DX05_RS11000 PF06800 Sugar transport protein DX05_RS11010 PF00571 CBS domain DX05_RS11010 PF00478 IMP dehydrogenase / GMP reductase domain DX05_RS11015 PF01316 Arginine repressor, DNA binding domain DX05_RS11015 PF02863 Arginine repressor, C-terminal domain DX05_RS11020 PF13545 Crp-like helix-turn-helix domain DX05_RS11020 PF00027 Cyclic nucleotide-binding domain DX05_RS11035 PF13673 Acetyltransferase (GNAT) domain DX05_RS11040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DX05_RS11040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DX05_RS11045 PF13520 Amino acid permease DX05_RS11050 PF00696 Amino acid kinase family DX05_RS11055 PF00579 tRNA synthetases class I (W and Y) DX05_RS11065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DX05_RS11065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DX05_RS11070 PF00005 ABC transporter DX05_RS11070 PF12848 ABC transporter DX05_RS11075 PF09586 Bacterial membrane protein YfhO DX05_RS11100 PF02590 Predicted SPOUT methyltransferase DX05_RS11105 PF13180 PDZ domain DX05_RS11110 PF17762 HTH domain found in ParB protein DX05_RS11110 PF02195 ParB-like nuclease domain DX05_RS11125 PF04650 YSIRK type signal peptide DX05_RS11125 PF00746 LPXTG cell wall anchor motif DX05_RS11125 PF17480 AlphaC C-terminal DX05_RS11125 PF08829 Alpha C protein N terminal