locus_tag old_locus_tag gene Name start end strand product note type ID NCBI SAG0001 SAG0001 dnaA dnaA 102 1463 + chromosome replication initiator DnaA binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0001 SAG0002 SAG0002 dnaN dnaN 1618 2754 + DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0002 SAG0003 SAG0003 SAG0003 2824 3705 + diacylglycerol kinase catalytic subunit identified by match to PFAM protein family HMM PF00781 gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0003 SAG0004 SAG0004 SAG0004 3715 3912 + hypothetical protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0004 SAG0005 SAG0005 SAG0005 4114 4317 + hypothetical protein gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0005 SAG0006 SAG0006 ychF ychF 4477 5592 + GTP-dependent nucleic acid-binding protein EngD translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0006 SAG0007 SAG0007 pth pth 5676 6251 + peptidyl-tRNA hydrolase Enables the recycling of peptidyl-tRNAs produced at termination of translation gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0007 SAG0008 SAG0008 mfd mfd 6248 9745 + transcription-repair coupling factor identified by match to PFAM protein family HMM PF00270 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0008 SAG0009 SAG0009 SAG0009 9906 10001 + hypothetical protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0009 SAG0010 SAG0010 SAG0010 10036 10308 + S4 domain-containing protein identified by match to PFAM protein family HMM PF01479 gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0010 SAG0011 SAG0011 SAG0011 10295 10666 + hypothetical protein similar to OMNI:NTL01SPL0011%3B identified by sequence similarity gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0011 SAG0012 SAG0012 SAG0012 10669 10803 + hypothetical protein gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0012 SAG0013 SAG0013 SAG0013 10803 12089 + hypothetical protein The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0013 SAG0014 SAG0014 SAG0014 12091 13365 + MesJ/Ycf62 family protein gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0014 SAG0015 SAG0015 hpt hpt 13370 13912 + hypoxanthine-guanine phosphoribosyltransferase Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine%2C respectively gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0015 SAG0016 SAG0016 ftsH ftsH 13935 15911 + cell division protein FtsH identified by match to PFAM protein family HMM PF00004 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0016 SAG0017 SAG0017 pscB pscB 28902 30245 + PcsB protein similar to GP:12667037%3B identified by sequence similarity gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0017 SAG0018 SAG0018 prsA-1 prsA-1 30369 31337 + ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0018 SAG0019 SAG0019 SAG0019 31445 32620 + aromatic amino acid aminotransferase catalyzes the transamination of the aromatic amino acid forming a ketoacid%3B first step in aromatic amino acid degradation in lactococci gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0019 SAG0020 SAG0020 recO recO 32610 33371 + DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0020 SAG0021 SAG0021 SAG0021 33461 34312 + protease identified by match to PFAM protein family HMM PF02517 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0021 SAG0022 SAG0022 plsX plsX 34390 35382 + glycerol-3-phosphate acyltransferase PlsX involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0022 SAG0023 SAG0023 acpP-1 acpP-1 35393 35632 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0023 SAG0024 SAG0024 purC purC 35756 36460 + phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0024 SAG0025 SAG0025 SAG0025 36583 40308 + phosphoribosylformylglycinamidine synthase identified by match to PFAM protein family HMM PF02769 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0025 SAG0026 SAG0026 purF purF 40720 42174 + amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0026 SAG0027 SAG0027 purM purM 42202 43224 + phosphoribosylaminoimidazole synthetase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0027 SAG0028 SAG0028 purN purN 43392 43940 + phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0028 SAG0029 SAG0029 SAG0029 43963 44715 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0029 SAG0030 SAG0030 purH purH 44735 46282 + bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase involved in de novo purine biosynthesis gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0030 SAG0031 SAG0031 SAG0031 46475 47374 + M24/M37 family peptidase identified by match to PFAM protein family HMM PF01551 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0031 SAG0032 SAG0032 SAG0032 47521 48825 + group B streptococcal surface immunogenic protein identified by match to PFAM protein family HMM PF01476 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0032 SAG0033 SAG0033 SAG0033 49072 49770 + N-acetylmannosamine-6-phosphate 2-epimerase Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0033 SAG0034 SAG0034 SAG0034 49817 51133 + sugar ABC transporter sugar-binding protein identified by match to PFAM protein family HMM PF01547 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0034 SAG0035 SAG0035 SAG0035 51221 52108 + sugar ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0035 SAG0036 SAG0036 SAG0036 52118 52948 + sugar ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0036 SAG0037 SAG0037 SAG0037 52961 53404 + hypothetical protein gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0037 SAG0038 SAG0038 SAG0038 53424 54086 + hypothetical protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0038 SAG0039 SAG0039 SAG0039 54083 55000 + N-acetylneuraminate lyase identified by match to PFAM protein family HMM PF00701 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0039 SAG0040 SAG0040 SAG0040 55017 55898 + ROK family protein identified by match to PFAM protein family HMM PF00480%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0040 SAG0041 SAG0041 SAG0041 55906 56883 + acetyl xylan esterase gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0041 SAG0042 SAG0042 SAG0042 56906 57709 - RpiR family transcriptional regulator identified by match to PFAM protein family HMM PF01380 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0042 SAG0043 SAG0043 purD purD 57991 59256 + phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0043 SAG0044 SAG0044 purE purE 59537 60025 + phosphoribosylaminoimidazole carboxylase catalytic subunit Catalyzes a step in the de novo purine nucleotide biosynthetic pathway gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0044 SAG0045 SAG0045 purK purK 60012 61103 + phosphoribosylaminoimidazole carboxylase ATPase subunit With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0045 SAG0046 SAG0046 SAG0046 61157 62548 + hypothetical protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0046 SAG0047 SAG0047 purB purB 62573 63871 + adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0047 SAG0048 SAG0048 SAG0048 64023 64934 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0048 SAG0049 SAG0049 ruvB ruvB 65231 66229 + Holliday junction DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0049 SAG0050 SAG0050 SAG0050 66381 66818 + phosphotyrosine protein phosphatase%2C low molecular weight identified by match to PFAM protein family HMM PF01451 gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0050 SAG0051 SAG0051 SAG0051 66825 67205 + MORN motif-containing protein identified by match to PFAM protein family HMM PF02493 gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0051 SAG0052 SAG0052 SAG0052 67202 68980 + hypothetical protein identified by match to PFAM protein family HMM PF01757 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0052 SAG0053 SAG0053 adhE adhE 69250 71892 + bifunctional acetaldehyde-CoA/alcohol dehydrogenase identified by match to PFAM protein family HMM PF00171 gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0053 SAG0054 SAG0054 adhP adhP 72071 73087 + alcohol dehydrogenase similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0054 SAG0055 SAG0055 thrC thrC 73207 74697 + threonine synthase catalyzes the formation of L-threonine from O-phospho-L-homoserine gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0055 SAG0056 SAG0056 SAG0056 74844 76082 + MATE efflux family protein identified by match to PFAM protein family HMM PF01554 gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0056 SAG0057 SAG0057 rpsJ rpsJ 76288 76596 + 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0057 SAG0058 SAG0058 rplC rplC 76701 77327 + 50S ribosomal protein L3 binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0058 SAG0059 SAG0059 rplD rplD 77351 77974 + 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0059 SAG0060 SAG0060 rplW rplW 77974 78270 + 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0060 SAG0061 SAG0061 rplB rplB 78288 79121 + 50S ribosomal protein L2 one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0061 SAG0062 SAG0062 rpsS rpsS 79220 79498 + 30S ribosomal protein S19 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0062 SAG0063 SAG0063 rplV rplV 79514 79858 + 50S ribosomal protein L22 binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0063 SAG0064 SAG0064 rpsC rpsC 79871 80524 + 30S ribosomal protein S3 forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0064 SAG0065 SAG0065 rplP rplP 80528 80941 + 50S ribosomal protein L16 located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0065 SAG0066 SAG0066 rpmC rpmC 80951 81157 + 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0066 SAG0067 SAG0067 rpsQ rpsQ 81183 81443 + 30S ribosomal protein S17 primary binding protein%3B helps mediate assembly%3B involved in translation fidelity gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0067 SAG0068 SAG0068 rplN rplN 81468 81836 + 50S ribosomal protein L14 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0068 SAG0069 SAG0069 rplX rplX 81916 82221 + 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0069 SAG0070 SAG0070 rplE rplE 82245 82787 + 50S ribosomal protein L5 part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0070 SAG0071 SAG0071 rpsN rpsN 82805 82990 + 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group appear to contain the zinc-binding motif gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0071 SAG0072 SAG0072 rpsH rpsH 83145 83543 + 30S ribosomal protein S8 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0072 SAG0073 SAG0073 rplF rplF 83653 84189 + 50S ribosomal protein L6 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0073 SAG0074 SAG0074 rplR rplR 84290 84646 + 50S ribosomal protein L18 binds 5S rRNA along with protein L5 and L25 gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0074 SAG0075 SAG0075 rpsE rpsE 84665 85159 + 30S ribosomal protein S5 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0075 SAG0076 SAG0076 rpmD rpmD 85174 85353 + 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0076 SAG0077 SAG0077 rplO rplO 85478 85918 + 50S ribosomal protein L15 late assembly protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0077 SAG0078 SAG0078 secY secY 85939 87243 + preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0078 SAG0079 SAG0079 adk adk 87338 87976 + adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0079 SAG0080 SAG0080 infA infA 88092 88310 + translation initiation factor IF-1 stimulates the activities of the other two initiation factors%2C IF-2 and IF-3 gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0080 SAG0081 SAG0081 rpmJ rpmJ 88336 88452 + 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0081 SAG0082 SAG0082 rpsM rpsM 88470 88835 + 30S ribosomal protein S13 located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0082 SAG0083 SAG0083 rpsK rpsK 88853 89236 + 30S ribosomal protein S11 located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3 gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0083 SAG0084 SAG0084 rpoA rpoA 89286 90224 + DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0084 SAG0085 SAG0085 rplQ rplQ 90239 90625 + 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0085 SAG0086 SAG0086 SAG0086 97819 98076 + lipoprotein gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0086 SAG0087 SAG0087 SAG0087 98067 98246 + hypothetical protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0087 SAG0088 SAG0088 SAG0088 98316 98486 + hypothetical protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0088 SAG0089 SAG0089 SAG0089 99401 99952 + hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0089 SAG0090 SAG0090 SAG0090 100172 100591 + hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0090 SAG0091 SAG0091 SAG0091 100836 101270 + ComX1 family transcriptional regulator similar to OMNI:SP0014%3B identified by sequence similarity gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0091 SAG0092 SAG0092 SAG0092 101392 102084 + phosphoglycerate mutase family protein identified by match to PFAM protein family HMM PF00300 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0092 SAG0093 SAG0093 SAG0093 102081 102833 + D-alanyl-D-alanine carboxypeptidase identified by match to PFAM protein family HMM PF02557 gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0093 SAG0094 SAG0094 SAG0094 102830 103405 + N-acetylmuramoyl-L-alanine amidase identified by match to PFAM protein family HMM PF01832 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0094 SAG0095 SAG0095 hrcA hrcA 103548 104582 + heat-inducible transcription repressor Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0095 SAG0096 SAG0096 grpE grpE 104585 105157 + heat shock protein GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0096 SAG0097 SAG0097 dnaK dnaK 105338 107167 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0097 SAG0098 SAG0098 dnaJ dnaJ 107456 108595 + molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0098 SAG0099 SAG0099 SAG0099 108709 109956 + GntR family transcriptional regulator identified by match to PFAM protein family HMM PF00392 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0099 SAG0100 SAG0100 truA truA 110027 110803 + tRNA pseudouridine synthase A mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0100 SAG0101 SAG0101 SAG0101 110766 111524 + phosphomethylpyrimidine kinase catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0101 SAG0102 SAG0102 SAG0102 111534 111998 + hypothetical protein gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0102 SAG0103 SAG0103 SAG0103 111995 112564 + hypothetical protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0103 SAG0104 SAG0104 SAG0104 112601 113443 - hypothetical protein gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0104 SAG0105 SAG0105 tig tig 113600 114883 + trigger factor Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0105 SAG0106 SAG0106 SAG0106 115072 115647 + DNA-directed RNA polymerase subunit delta participates in both the initiation and recycling phases of transcription%3B in the presence of the delta subunit%2C RNAP displays an increased specificity of transcription%2C a decreased affinity for nucleic acids%2C and an increased efficiency of RNA synthesis because of enhanced recycling gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0106 SAG0107 SAG0107 pyrG pyrG 115920 117524 + CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0107 SAG0108 SAG0108 SAG0108 117633 118559 + hypothetical protein gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0108 SAG0109 SAG0109 dut dut 118754 119200 + deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0109 SAG0110 SAG0110 radA radA 119362 120726 + DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0110 SAG0111 SAG0111 SAG0111 120862 121359 + carbonic anhydrase-like protein gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0111 SAG0112 SAG0112 SAG0112 121513 122832 + pyridine nucleotide-disulfide oxidoreductase Involved in disulfide oxidoreductase activity and electron transport gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0112 SAG0113 SAG0113 gltX gltX 123041 124495 + glutamyl-tRNA synthetase Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0113 SAG0114 SAG0114 rbsB rbsB 124535 125503 - ribose ABC transporter periplasmic D-ribose-binding protein identified by match to PFAM protein family HMM PF00532 gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0114 SAG0115 SAG0115 rbsC rbsC 125556 126488 - ribose ABC transporter permease identified by match to PFAM protein family HMM PF02653 gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0115 SAG0116 SAG0116 rbsA rbsA 126499 127977 - ribose ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0116 SAG0117 SAG0117 rbsD rbsD 127993 128391 - D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0117 SAG0118 SAG0118 rbsK rbsK 128366 129277 - ribokinase identified by match to PFAM protein family HMM PF00294 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0118 SAG0119 SAG0119 rbsR rbsR 129270 130256 - ribose operon repressor RbsR identified by match to PFAM protein family HMM PF00356 gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0119 SAG0120 SAG0120 SAG0120 130314 130412 - hypothetical protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0120 SAG0121 SAG0121 SAG0121 130438 131526 + permease identified by match to PFAM protein family HMM PF02687 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0121 SAG0122 SAG0122 SAG0122 131526 132212 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0122 SAG0123 SAG0123 SAG0123 132243 132914 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0123 SAG0124 SAG0124 SAG0124 132907 133977 + sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0124 SAG0125 SAG0125 argG argG 134131 135321 + argininosuccinate synthase catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis%2C AMP-forming gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0125 SAG0126 SAG0126 argH argH 135340 136728 + argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0126 SAG0127 SAG0127 fba fba 136869 137750 + fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0127 SAG0128 SAG0128 SAG0128 137834 138751 - L-2-hydroxyisocaproate dehydrogenase identified by match to PFAM protein family HMM PF00056 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0128 SAG0129 SAG0129 rpmB rpmB 138990 139178 + 50S ribosomal protein L28 required for 70S ribosome assembly gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0129 SAG0130 SAG0130 SAG0130 139310 139675 + hypothetical protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0130 SAG0131 SAG0131 SAG0131 139708 141339 + DAK2 domain-containing protein identified by match to PFAM protein family HMM PF02734 gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0131 SAG0132 SAG0132 SAG0132 141487 142371 + hypothetical protein identified by match to PFAM protein family HMM PF01145%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0132 SAG0133 SAG0133 SAG0133 142463 142579 - hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0133 SAG0134 SAG0134 SAG0134 142947 143237 - hypothetical protein gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0134 SAG0135 SAG0135 SAG0135 143579 144319 - amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0135 SAG0136 SAG0136 SAG0136 144329 145879 - amino acid ABC transporter amino acid-binding protein/permease identified by match to PFAM protein family HMM PF00497 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0136 SAG0137 SAG0137 SAG0137 146015 147898 + hypothetical protein gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0137 SAG0138 SAG0138 uppP uppP 147944 148783 + undecaprenyl pyrophosphate phosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0138 SAG0139 SAG0139 SAG0139 148903 149658 + adaptor protein enables recognition and targeting of proteins for proteolysis%2C involved in negative regulation of competence gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0139 SAG0140 SAG0140 SAG0140 149660 150820 + glycoside hydrolase family protein identified by match to PFAM protein family HMM PF00953 gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0140 SAG0141 SAG0141 SAG0141 150985 151755 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0141 SAG0142 SAG0142 SAG0142 151792 153054 + hypothetical protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0142 SAG0143 SAG0143 csdB csdB 153056 154288 + selenocysteine lyase identified by match to PFAM protein family HMM PF00266 gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0143 SAG0144 SAG0144 SAG0144 154275 154718 + NifU family protein identified by match to PFAM protein family HMM PF01592 gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0144 SAG0145 SAG0145 SAG0145 154818 156236 + hypothetical protein gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0145 SAG0146 SAG0146 SAG0146 156308 157495 - penicillin-binding protein 4 identified by match to PFAM protein family HMM PF00768 gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0146 SAG0147 SAG0147 SAG0147 157648 158883 - D-alanyl-D-alanine carboxypeptidase identified by match to PFAM protein family HMM PF00768 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0147 SAG0148 SAG0148 SAG0148 159124 160779 + oligopeptide ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF00496 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0148 SAG0149 SAG0149 SAG0149 160898 161812 + oligopeptide ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0149 SAG0150 SAG0150 SAG0150 161822 162853 + oligopeptide ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0150 SAG0151 SAG0151 SAG0151 162866 163912 + oligopeptide ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0151 SAG0152 SAG0152 SAG0152 163912 164844 + oligopeptide ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0152 SAG0153 SAG0153 ipk ipk 170382 171233 + 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0153 SAG0154 SAG0154 adcR adcR 171319 171762 + adc operon repressor AdcR identified by match to PFAM protein family HMM PF01047 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0154 SAG0155 SAG0155 SAG0155 171765 172475 + zinc ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0155 SAG0156 SAG0156 SAG0156 172465 173277 + zinc ABC transporter permease identified by match to PFAM protein family HMM PF00950 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0156 SAG0157 SAG0157 SAG0157 173488 174560 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:NTL01SPL0534%3B identified by sequence similarity%3B deoxyribonuclease-related protein%2C degenerate gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0157 SAG0158 SAG0158 tyrS tyrS 175097 176356 - tyrosyl-tRNA synthetase catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0158 SAG0159 SAG0159 SAG0159 176467 178764 + penicillin-binding protein 1B identified by match to PFAM protein family HMM PF00905 gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0159 SAG0160 SAG0160 rpoB rpoB 179288 182863 + DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0160 SAG0161 SAG0161 rpoC rpoC 182980 186630 + DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0161 SAG0162 SAG0162 SAG0162 186744 187109 + hypothetical protein gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0162 SAG0163 SAG0163 cglA cglA 187282 188253 + competence protein CglA identified by match to PFAM protein family HMM PF00437 gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0163 SAG0164 SAG0164 cglB cglB 188342 189190 + competence protein CglB identified by match to PFAM protein family HMM PF00482 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0164 SAG0165 SAG0165 SAG0165 189187 189642 + hypothetical protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0165 SAG0166 SAG0166 SAG0166 189620 189991 + hypothetical protein similar to OMNI:NTL01SPL0084%3B identified by sequence similarity gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0166 SAG0167 SAG0167 SAG0167 190106 191080 + hypothetical protein gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0167 SAG0168 SAG0168 ackA ackA 191112 192305 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0168 SAG0169 SAG0169 SAG0169 192457 192663 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0169 SAG0170 SAG0170 SAG0170 192722 192859 + hypothetical protein gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0170 SAG0171 SAG0171 SAG0171 192900 193355 + hypothetical protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0171 SAG0172 SAG0172 SAG0172 193424 194089 + protease identified by match to PFAM protein family HMM PF02517 gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0172 SAG0173 SAG0173 proC proC 194110 194880 - pyrroline-5-carboxylate reductase catalyzes the formation of L-proline from pyrroline-5-carboxylate gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0173 SAG0174 SAG0174 pepA pepA 194950 196017 - glutamyl-aminopeptidase similar to PID:1072381%3B identified by sequence similarity gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0174 SAG0175 SAG0175 SAG0175 196202 196441 - hypothetical protein gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0175 SAG0176 SAG0176 SAG0176 196602 196886 + hypothetical protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0176 SAG0177 SAG0177 SAG0177 196883 197206 + thioredoxin identified by match to PFAM protein family HMM PF00085 gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0177 SAG0178 SAG0178 SAG0178 197239 197865 + tRNA-binding domain-containing protein identified by match to PFAM protein family HMM PF01588 gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0178 SAG0179 SAG0179 SAG0179 197919 198635 - hypothetical protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0179 SAG0180 SAG0180 ssb-1 ssb-1 198716 199111 + single-stranded DNA-binding protein binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0180 SAG0181 SAG0181 SAG0181 199235 199879 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0181 SAG0182 SAG0182 SAG0182 199906 201651 + sensor histidine kinase identified by match to PFAM protein family HMM PF02518 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0182 SAG0183 SAG0183 SAG0183 201632 202372 + response regulator identified by match to PFAM protein family HMM PF00072 gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0183 SAG0184 SAG0184 SAG0184 202542 202997 + hypothetical protein gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0184 SAG0185 SAG0185 SAG0185 202999 203727 + hypothetical protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0185 SAG0186 SAG0186 SAG0186 203839 203949 - hypothetical protein gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0186 SAG0187 SAG0187 SAG0187 203970 205598 + oligopeptide ABC transporter oligopeptide-binding protein identified by match to PFAM protein family HMM PF00496 gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0187 SAG0188 SAG0188 SAG0188 205711 206688 + oligopeptide ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0188 SAG0189 SAG0189 SAG0189 206685 207506 + oligopeptide ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0189 SAG0190 SAG0190 SAG0190 207518 208321 + peptide ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0190 SAG0191 SAG0191 SAG0191 208305 208931 + peptide ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0191 SAG0192 SAG0192 SAG0192 209214 211244 + PTS system transporter subunit IIABC identified by match to PFAM protein family HMM PF00358 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0192 SAG0193 SAG0193 SAG0193 211466 213091 + alpha amylase identified by match to PFAM protein family HMM PF00128 gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0193 SAG0194 SAG0194 SAG0194 213307 215226 + BglG family transcriptional antiterminator identified by match to PFAM protein family HMM PF00359 gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0194 SAG0195 SAG0195 SAG0195 215240 216373 - IS1548 transposase identified by match to PFAM protein family HMM PF01609 gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0195 SAG0196 SAG0196 SAG0196 216468 216668 + hypothetical protein similar to OMNI:SP2131%3B identified by sequence similarity gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0196 SAG0197 SAG0197 SAG0197 216671 216955 + PTS system transporter subunit IIB similar to OMNI:SP2130%3B identified by sequence similarity gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0197 SAG0198 SAG0198 ulaA ulaA 216968 218323 + PTS system ascorbate-specific transporter subunit IIC membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0198 SAG0199 SAG0199 SAG0199 218326 219183 + transketolase identified by match to PFAM protein family HMM PF00456 gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0199 SAG0200 SAG0200 SAG0200 219180 220109 + transketolase identified by match to PFAM protein family HMM PF02779 gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0200 SAG0201 SAG0201 SAG0201 220218 221477 + oxidoreductase identified by match to PFAM protein family HMM PF00175 gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0201 SAG0202 SAG0202 rpsO rpsO 221565 221834 + 30S ribosomal protein S15 primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0202 SAG0203 SAG0203 pnp pnp 222215 224344 + polynucleotide phosphorylase identified by match to PFAM protein family HMM PF00013 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0203 SAG0204 SAG0204 SAG0204 224346 225098 + hypothetical protein gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0204 SAG0205 SAG0205 cysE cysE 225107 225691 + serine O-acetyltransferase identified by match to PFAM protein family HMM PF00132 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0205 SAG0206 SAG0206 SAG0206 225701 225883 + lipoprotein gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0206 SAG0207 SAG0207 cysS cysS 225880 227223 + cysteinyl-tRNA synthetase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0207 SAG0208 SAG0208 SAG0208 227216 227602 + hypothetical protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0208 SAG0209 SAG0209 SAG0209 227705 228460 + RNA methyltransferase identified by match to PFAM protein family HMM PF00588 gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0209 SAG0210 SAG0210 SAG0210 228457 228975 + hypothetical protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0210 SAG0211 SAG0211 SAG0211 229068 229928 + DegV family protein identified by match to PFAM protein family HMM PF02645 gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0211 SAG0212 SAG0212 SAG0212 230061 230159 + hypothetical protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0212 SAG0213 SAG0213 SAG0213 230273 230392 + hypothetical protein gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0213 SAG0214 SAG0214 rplM rplM 230809 231255 + 50S ribosomal protein L13 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0214 SAG0215 SAG0215 rpsI rpsI 231276 231668 + 30S ribosomal protein S9 forms a direct contact with the tRNA during translation gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0215 SAG0216 SAG0216 SAG0216 231682 231783 - hypothetical protein gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0216 SAG0217 SAG0217 SAG0217 231796 232950 - phage integrase family site specific recombinase identified by match to PFAM protein family HMM PF00589 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0217 SAG0218 SAG0218 SAG0218 233015 233491 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0218 SAG0219 SAG0219 SAG0219 233645 233950 + hypothetical protein gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0219 SAG0220 SAG0220 SAG0220 234087 234365 + hypothetical protein gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0220 SAG0221 SAG0221 SAG0221 234376 234606 + hypothetical protein gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0221 SAG0222 SAG0222 SAG0222 234619 234945 + hypothetical protein similar to OMNI:EFC0001%3B identified by sequence similarity gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0222 SAG0223 SAG0223 SAG0223 234949 235578 + hypothetical protein gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0223 SAG0224 SAG0224 SAG0224 235768 236766 + replication initiation protein identified by match to PFAM protein family HMM PF02486 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0224 SAG0225 SAG0225 SAG0225 236802 237236 + hypothetical protein gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0225 SAG0226 SAG0226 SAG0226 237552 238808 + recombination protein identified by match to PFAM protein family HMM PF01076 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0226 SAG0227 SAG0227 SAG0227 238976 239446 + hypothetical protein gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0227 SAG0228 SAG0228 SAG0228 239751 240086 - hypothetical protein gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0228 SAG0229 SAG0229 SAG0229 240076 240363 - hypothetical protein gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0229 SAG0230 SAG0230 SAG0230 240870 241160 + hypothetical protein gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0230 SAG0231 SAG0231 SAG0231 241262 241669 + hypothetical protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0231 SAG0232 SAG0232 SAG0232 241669 242229 + hypothetical protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0232 SAG0233 SAG0233 SAG0233 242202 242882 + hypothetical protein gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0233 SAG0234 SAG0234 SAG0234 242867 243253 + hypothetical protein gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0234 SAG0235 SAG0235 SAG0235 243287 243568 + hypothetical protein gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0235 SAG0236 SAG0236 SAG0236 243659 243757 + hypothetical protein gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0236 SAG0237 SAG0237 SAG0237 244185 244289 + hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0237 SAG0238 SAG0238 SAG0238 244286 244411 + hypothetical protein gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0238 SAG0239 SAG0239 SAG0239 244411 245271 + MutR family transcriptional regulator gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0239 SAG0240 SAG0240 SAG0240 245344 246525 + transporter gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0240 SAG0241 SAG0241 SAG0241 246587 247228 - amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0241 SAG0242 SAG0242 SAG0242 247238 248164 - amino acid ABC transporter amino acid-binding protein similar to GB:AL009126%3B identified by sequence similarity gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0242 SAG0243 SAG0243 SAG0243 248167 248802 - amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0243 SAG0244 SAG0244 SAG0244 248802 249947 - amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0244 SAG0245 SAG0245 SAG0245 256634 257092 + hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0245 SAG0246 SAG0246 SAG0246 257156 257962 + hypothetical protein gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0246 SAG0247 SAG0247 SAG0247 258440 258790 + hypothetical protein gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0247 SAG0248 SAG0248 SAG0248 258809 259081 + hypothetical protein gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0248 SAG0249 SAG0249 SAG0249 259091 259441 + hypothetical protein gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0249 SAG0250 SAG0250 SAG0250 260302 260883 + hypothetical protein gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0250 SAG0251 SAG0251 SAG0251 260886 261104 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0251 SAG0252 SAG0252 SAG0252 261677 262237 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0252 SAG0253 SAG0253 SAG0253 262337 262915 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0253 SAG0254 SAG0254 SAG0254 262958 263638 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0254 SAG0255 SAG0255 SAG0255 263898 264845 - hypothetical protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0255 SAG0256 SAG0256 SAG0256 264842 265333 - ECF subfamily RNA polymerase sigma factor identified by match to PFAM protein family HMM PF00776 gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0256 SAG0257 SAG0257 SAG0257 265617 265778 + lipoprotein gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0257 SAG0258 SAG0258 SAG0258 265913 266521 - TetR family transcriptional regulator identified by match to PFAM protein family HMM PF00440 gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0258 SAG0259 SAG0259 SAG0259 266545 267642 - ABC transporter gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0259 SAG0260 SAG0260 SAG0260 267645 268361 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0260 SAG0261 SAG0261 SAG0261 268657 269046 - IS1381 transposase protein B identified by match to PFAM protein family HMM PF01609 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0261 SAG0262 SAG0262 SAG0262 269079 269462 - IS1381 transposase protein A similar to OMNI:SP0537%3B identified by sequence similarity gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0262 SAG0263 SAG0263 SAG0263 269498 270013 - hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0263 SAG0264 SAG0264 SAG0264 270190 270501 - hypothetical protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0264 SAG0265 SAG0265 SAG0265 270693 271400 + hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0265 SAG0266 SAG0266 nagA nagA 271678 272826 + N-acetylglucosamine-6-phosphate deacetylase identified by match to PFAM protein family HMM PF02612 gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0266 SAG0267 SAG0267 SAG0267 272945 273487 + hypothetical protein gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0267 SAG0268 SAG0268 glyQ glyQ 273800 274714 + glycyl-tRNA synthetase subunit alpha glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0268 SAG0269 SAG0269 SAG0269 274714 275355 + ACP phosphodieterase gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0269 SAG0270 SAG0270 glyS glyS 275359 277398 + glycyl-tRNA synthetase subunit beta glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0270 SAG0271 SAG0271 SAG0271 277410 277667 + hypothetical protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0271 SAG0272 SAG0272 SAG0272 277756 278019 + hypothetical protein similar to OMNI:NTL01SPL1075%3B identified by sequence similarity gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0272 SAG0273 SAG0273 glpK glpK 278134 279642 + glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0273 SAG0274 SAG0274 SAG0274 279655 281484 + alpha-glycerophosphate oxidase identified by match to PFAM protein family HMM PF01224 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0274 SAG0275 SAG0275 glpF-1 glpF-1 281496 282194 + glycerol uptake facilitator protein identified by match to PFAM protein family HMM PF00230 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0275 SAG0276 SAG0276 SAG0276 282282 283619 + NADH oxidase identified by match to PFAM protein family HMM PF00070 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0276 SAG0277 SAG0277 SAG0277 283610 285040 + hypothetical protein gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0277 SAG0278 SAG0278 tkt tkt 285165 287150 + transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0278 SAG0279 SAG0279 SAG0279 287363 287668 + hypothetical protein gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0279 SAG0280 SAG0280 SAG0280 287688 288422 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0280 SAG0281 SAG0281 SAG0281 288426 290030 + hypothetical protein similar to OMNI:NTL01SPL1317%3B identified by sequence similarity gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0281 SAG0282 SAG0282 SAG0282 290238 291623 - PTS system transporter subunit IIBC identified by match to PFAM protein family HMM PF00367 gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0282 SAG0283 SAG0283 proB proB 291764 292567 + gamma-glutamyl kinase catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0283 SAG0284 SAG0284 proA proA 292577 293830 + gamma-glutamyl phosphate reductase Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0284 SAG0285 SAG0285 mraW mraW 293913 294860 + S-adenosyl-methyltransferase MraW gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0285 SAG0286 SAG0286 SAG0286 294875 295201 + cell division protein FtsL similar to OMNI:SP0335%3B identified by sequence similarity gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0286 SAG0287 SAG0287 pbpX pbpX 295205 297463 + penicillin-binding protein 2X identified by match to PFAM protein family HMM PF00905 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0287 SAG0288 SAG0288 mraY mraY 297465 298475 + phospho-N-acetylmuramoyl-pentapeptide-transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0288 SAG0289 SAG0289 SAG0289 298573 299916 + DEAD/DEAH box helicase identified by match to PFAM protein family HMM PF00270 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0289 SAG0290 SAG0290 SAG0290 300054 300866 + ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF00497 gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0290 SAG0291 SAG0291 SAG0291 300961 301764 + amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0291 SAG0292 SAG0292 SAG0292 301764 302507 + amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0292 SAG0293 SAG0293 SAG0293 302629 302853 + hypothetical protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0293 SAG0294 SAG0294 trxB trxB 302922 303836 + thioredoxin reductase identified by match to PFAM protein family HMM PF00070 gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0294 SAG0295 SAG0295 SAG0295 303994 305454 + nicotinate phosphoribosyltransferase catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0295 SAG0296 SAG0296 nadE nadE 305451 306272 + NAD synthetase catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0296 SAG0297 SAG0297 pepC pepC 306385 307719 + aminopeptidase identified by match to PFAM protein family HMM PF03051 gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0297 SAG0298 SAG0298 pbp1A pbp1A 307765 310017 - penicillin-binding protein 1A identified by match to PFAM protein family HMM PF00905 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0298 SAG0299 SAG0299 recU recU 310004 310603 - Holliday junction-specific endonuclease functions in homologous recombination%2C DNA repair%2C and chromosome segregation%3B binds preferentially to three- and four-stranded DNA intermediates%3B introduces specific nick sites in four-stranded DNA substrates%3B functions similarly to Escherichia coli RuvC gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0299 SAG0300 SAG0300 SAG0300 310678 311196 + hypothetical protein gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0300 SAG0301 SAG0301 SAG0301 311177 311299 + hypothetical protein gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0301 SAG0302 SAG0302 SAG0302 311317 311649 + cell division protein GpsB GpsB%3B guiding PBP1 shuttling%3B similar to DivIVA gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0302 SAG0303 SAG0303 SAG0303 312119 313273 + hypothetical protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0303 SAG0304 SAG0304 SAG0304 313286 314749 + hypothetical protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0304 SAG0305 SAG0305 luxS luxS 314974 315456 - S-ribosylhomocysteinase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0305 SAG0306 SAG0306 SAG0306 315645 317252 + hypothetical protein identified by match to PFAM protein family HMM PF00013 gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0306 SAG0307 SAG0307 SAG0307 317299 317400 + hypothetical protein gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0307 SAG0308 SAG0308 SAG0308 317381 318277 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0308 SAG0309 SAG0309 SAG0309 318264 319004 + hypothetical protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0309 SAG0310 SAG0310 SAG0310 319001 320086 + hypothetical protein gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0310 SAG0311 SAG0311 SAG0311 320088 320678 + This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP2000%3B identified by sequence similarity%3B DNA-binding response regulator%2C authentic point mutation gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0311 SAG0312 SAG0312 SAG0312 320728 321432 + hypothetical protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0312 SAG0313 SAG0313 gmk gmk 321599 322228 + guanylate kinase Essential for recycling GMP and indirectly%2C cGMP gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0313 SAG0314 SAG0314 SAG0314 322251 322565 + DNA-directed RNA polymerase subunit omega Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0314 SAG0315 SAG0315 priA priA 322639 325029 + primosome assembly protein PriA binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0315 SAG0316 SAG0316 fmt fmt 325076 326011 + methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0316 SAG0317 SAG0317 sun sun 326001 327323 + sun protein identified by match to PFAM protein family HMM PF01029 gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0317 SAG0318 SAG0318 SAG0318 327361 328098 + serine/threonine phosphatase identified by match to PFAM protein family HMM PF00481 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0318 SAG0319 SAG0319 SAG0319 328098 330053 + serine/threonine protein kinase identified by match to PFAM protein family HMM PF00069 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0319 SAG0320 SAG0320 SAG0320 330214 330909 + hypothetical protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0320 SAG0321 SAG0321 SAG0321 330906 331925 + sensor histidine kinase identified by match to PFAM protein family HMM PF02518 gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0321 SAG0322 SAG0322 SAG0322 331918 332559 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0322 SAG0323 SAG0323 SAG0323 332601 334001 + peptidyl-prolyl cis-trans isomerase identified by match to PFAM protein family HMM PF00160 gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0323 SAG0324 SAG0324 SAG0324 333985 334359 + hypothetical protein identified by match to PFAM protein family HMM PF00575 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0324 SAG0325 SAG0325 pflA-1 pflA-1 334406 335182 - pyruvate formate-lyase-activating enzyme identified by match to PFAM protein family HMM PF02143 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0325 SAG0326 SAG0326 SAG0326 335303 336058 + DeoR family transcriptional regulator identified by match to PFAM protein family HMM PF00455 gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0326 SAG0327 SAG0327 SAG0327 336177 337160 + transcriptional regulator gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0327 SAG0328 SAG0328 celC celC 337364 337687 + PTS system cellobiose-specific transporter subunit IIA identified by match to PFAM protein family HMM PF02255 gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0328 SAG0329 SAG0329 SAG0329 337704 338024 + PTS system cellobiose-specific transporter subunit IIB identified by match to PFAM protein family HMM PF02302 gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0329 SAG0330 SAG0330 celB celB 338026 339327 + PTS system cellobiose-specific transporter subunit IIC identified by match to PFAM protein family HMM PF02378 gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0330 SAG0331 SAG0331 pflD-1 pflD-1 339508 341964 + formate acetyltransferase identified by match to PFAM protein family HMM PF01228 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0331 SAG0332 SAG0332 SAG0332 341974 342642 + fructose-6-phosphate aldolase similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0332 SAG0333 SAG0333 gldA gldA 342710 343798 + glycerol dehydrogenase forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0333 SAG0334 SAG0334 cysK cysK 343950 344876 - cysteine synthase A identified by match to PFAM protein family HMM PF00291 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0334 SAG0335 SAG0335 SAG0335 344967 345611 - hypothetical protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0335 SAG0336 SAG0336 SAG0336 345667 346956 + helicase identified by match to PFAM protein family HMM PF00270 gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0336 SAG0337 SAG0337 SAG0337 346956 347621 + competence protein F gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0337 SAG0338 SAG0338 yfiA yfiA 347698 348252 + ribosomal subunit interface protein identified by match to PFAM protein family HMM PF02482 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0338 SAG0339 SAG0339 SAG0339 353792 355144 - aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B lysine and threonine sensitive gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0339 SAG0340 SAG0340 SAG0340 355238 355888 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0340 SAG0341 SAG0341 SAG0341 355874 356023 - hypothetical protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0341 SAG0342 SAG0342 SAG0342 356025 356816 + enoyl-CoA hydratase Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0342 SAG0343 SAG0343 SAG0343 356912 357346 + MarR family transcriptional regulator identified by match to PFAM protein family HMM PF01047 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0343 SAG0344 SAG0344 fabH fabH 357346 358317 + 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0344 SAG0345 SAG0345 acpP acpP 358375 358599 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0345 SAG0346 SAG0346 fabK fabK 358754 359713 + enoyl-ACP reductase identified by match to PFAM protein family HMM PF03060 gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0346 SAG0347 SAG0347 fabD fabD 359733 360659 + ACP S-malonyltransferase identified by match to PFAM protein family HMM PF00698 gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0347 SAG0348 SAG0348 fabG fabG 360668 361402 + 3-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0348 SAG0349 SAG0349 fabF fabF 361418 362650 + 3-oxoacyl-ACP synthase FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0349 SAG0350 SAG0350 accB accB 362652 363152 + acetyl-CoA carboxylase biotin carboxyl carrier protein subunit composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0350 SAG0351 SAG0351 fabZ fabZ 363149 363571 + (3R)-hydroxymyristoyl-ACP dehydratase in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0351 SAG0352 SAG0352 accC accC 363609 364979 + acetyl-CoA carboxylase biotin carboxylase subunit an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0352 SAG0353 SAG0353 accD accD 364988 365863 + acetyl-CoA carboxylase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0353 SAG0354 SAG0354 accA accA 365856 366629 + acetyl-CoA carboxylase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein%3B these proteins present a shorter N-terminus gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0354 SAG0355 SAG0355 SAG0355 367099 367731 + hypothetical protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0355 SAG0356 SAG0356 serS serS 367777 369054 - seryl-tRNA synthetase catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0356 SAG0357 SAG0357 SAG0357 369420 370412 + hypothetical protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0357 SAG0358 SAG0358 SAG0358 370450 370812 - hypothetical protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0358 SAG0359 SAG0359 SAG0359 370931 371842 - PTS system mannose-specific transporter subunit IID gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0359 SAG0360 SAG0360 manM manM 371857 372669 - PTS system mannose-specific transporter subunit IIC gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0360 SAG0361 SAG0361 manL manL 372702 373712 - PTS system mannose-specific transporter subunit IIAB gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0361 SAG0362 SAG0362 SAG0362 374015 374827 - HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0362 SAG0363 SAG0363 SAG0363 374916 375500 + hypothetical protein gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0363 SAG0364 SAG0364 SAG0364 375590 376201 + hypothetical protein similar to GB:AE000520%3B identified by sequence similarity gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0364 SAG0365 SAG0365 SAG0365 376304 377725 + xanthine/uracil permease family protein identified by match to PFAM protein family HMM PF00860 gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0365 SAG0366 SAG0366 SAG0366 377808 378317 + hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0366 SAG0367 SAG0367 SAG0367 378271 378831 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0367 SAG0368 SAG0368 SAG0368 378840 380147 + hypothetical protein identified by match to TIGR protein family HMM TIGR00350%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0368 SAG0369 SAG0369 SAG0369 380211 380507 - hypothetical protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0369 SAG0370 SAG0370 hit hit 380504 380923 - HIT family protein identified by match to PFAM protein family HMM PF01230 gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0370 SAG0371 SAG0371 SAG0371 381259 381762 + hypothetical protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0371 SAG0372 SAG0372 SAG0372 381814 382071 - hypothetical protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0372 SAG0373 SAG0373 SAG0373 382071 382796 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0373 SAG0374 SAG0374 SAG0374 382798 383832 + ABC transporter permease similar to OMNI:NTL01SPL1360%3B identified by sequence similarity gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0374 SAG0375 SAG0375 SAG0375 383890 384690 + hypothetical protein gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0375 SAG0376 SAG0376 trmB trmB 384680 385315 + tRNA (guanine-N(7)-)-methyltransferase tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0376 SAG0377 SAG0377 SAG0377 385898 386281 + hypothetical protein in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0377 SAG0378 SAG0378 nusA nusA 386317 387468 + transcription elongation factor NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0378 SAG0379 SAG0379 SAG0379 387490 387786 + hypothetical protein gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0379 SAG0380 SAG0380 SAG0380 387779 388081 + hypothetical protein identified by match to PFAM protein family HMM PF01248 gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0380 SAG0381 SAG0381 infB infB 388101 390884 + translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0381 SAG0382 SAG0382 rbfA rbfA 390975 391343 + ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0382 SAG0383 SAG0383 SAG0383 391427 392431 - hypothetical protein similar to OMNI:NTL01SPL1351%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0383 SAG0384 SAG0384 SAG0384 392595 393011 + transcriptional repressor CopY gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0384 SAG0385 SAG0385 SAG0385 393024 395258 + copper-transporter ATPase CopA identified by match to PFAM protein family HMM PF00122 gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0385 SAG0386 SAG0386 SAG0386 395299 395505 + copper-transporter protein CopZ identified by match to PFAM protein family HMM PF00403 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0386 SAG0387 SAG0387 SAG0387 395615 396229 + hypothetical protein identified by match to PFAM protein family HMM PF03458 gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0387 SAG0388 SAG0388 SAG0388 396244 397056 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0388 SAG0389 SAG0389 polA polA 397169 399811 + DNA polymerase I has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0389 SAG0390 SAG0390 SAG0390 399841 400281 + CoA-binding domain-containing protein identified by match to PFAM protein family HMM PF02629 gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0390 SAG0391 SAG0391 SAG0391 400363 400842 + FUR family transcriptional regulator identified by match to PFAM protein family HMM PF01475 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0391 SAG0392 SAG0392 SAG0392 400995 402560 + cell wall surface anchor family protein identified by match to PFAM protein family HMM PF00746%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0392 SAG0393 SAG0393 SAG0393 402673 403359 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0393 SAG0394 SAG0394 SAG0394 403361 404398 + sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0394 SAG0395 SAG0395 SAG0395 404412 405152 - hypothetical protein similar to OMNI:NTL01SPL0158%3B identified by sequence similarity gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0395 SAG0396 SAG0396 tgt tgt 405339 406481 + queuine tRNA-ribosyltransferase Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr) gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0396 SAG0397 SAG0397 SAG0397 406591 406899 + hypothetical protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0397 SAG0398 SAG0398 SAG0398 406906 407445 + BioY family protein identified by match to PFAM protein family HMM PF02632 gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0398 SAG0399 SAG0399 SAG0399 407584 408360 + AtsA/ElaC family protein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0399 SAG0400 SAG0400 SAG0400 408360 408866 + cytidine/deoxycytidylate deaminase family protein identified by match to PFAM protein family HMM PF00383 gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0400 SAG0401 SAG0401 SAG0401 408968 409102 + hypothetical protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0401 SAG0402 SAG0402 pgi pgi 409138 410487 + glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0402 SAG0403 SAG0403 SAG0403 410809 411336 + 5-formyltetrahydrofolate cyclo-ligase identified by match to PFAM protein family HMM PF01812 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0403 SAG0404 SAG0404 SAG0404 411327 412004 + rhomboid family protein identified by match to PFAM protein family HMM PF01694 gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0404 SAG0405 SAG0405 SAG0405 412136 413179 + hypothetical protein identified by match to PFAM protein family HMM PF02608%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0405 SAG0406 SAG0406 galU galU 413270 414169 - UTP-glucose-1-phosphate uridylyltransferase identified by match to PFAM protein family HMM PF00483 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0406 SAG0407 SAG0407 gpsA gpsA 414206 415222 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0407 SAG0408 SAG0408 rnpA rnpA 415392 415721 + ribonuclease P protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0408 SAG0409 SAG0409 SAG0409 415734 416549 + SpoIIIJ family protein identified by match to PFAM protein family HMM PF02096 gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0409 SAG0410 SAG0410 SAG0410 416557 417378 + R3H domain-containing protein identified by match to PFAM protein family HMM PF01424 gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0410 SAG0411 SAG0411 SAG0411 423100 423633 - hypothetical protein gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0411 SAG0412 SAG0412 recX recX 423717 424493 - RecX family transcriptional regulator binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0412 SAG0413 SAG0413 SAG0413 424592 425947 + RNA methyltransferase identified by match to PFAM protein family HMM PF01938 gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0413 SAG0414 SAG0414 SAG0414 426216 426677 + hypothetical protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0414 SAG0415 SAG0415 SAG0415 426820 427248 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0415 SAG0416 SAG0416 SAG0416 427436 431137 + protease identified by match to PFAM protein family HMM PF00082%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0416 SAG0417 SAG0417 SAG0417 431347 432255 + glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0417 SAG0418 SAG0418 nrdF nrdF 432807 433817 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0418 SAG0419 SAG0419 nrdI nrdI 433818 434231 + ribonucleotide reductase stimulatory protein in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0419 SAG0420 SAG0420 nrdE-1 nrdE-1 434233 436398 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0420 SAG0421 SAG0421 SAG0421 436461 439628 + hypothetical protein similar to OMNI:NTL01SPL0643%3B identified by sequence similarity%3B There are documented cases with S in place of G in the LPXTG motif. The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0421 SAG0422 SAG0422 SAG0422 439641 440030 + hypothetical protein gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0422 SAG0423 SAG0423 SAG0423 440074 440472 - hypothetical protein similar to OMNI:NTL01CA0427%3B identified by sequence similarity gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0423 SAG0424 SAG0424 SAG0424 440744 441028 - hypothetical protein gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0424 SAG0425 SAG0425 SAG0425 441115 441432 - carboxymuconolactone decarboxylase family protein identified by match to PFAM protein family HMM PF02627 gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0425 SAG0426 SAG0426 SAG0426 441456 441851 - hypothetical protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0426 SAG0427 SAG0427 SAG0427 441861 442250 - MerR family transcriptional regulator identified by match to PFAM protein family HMM PF00376 gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0427 SAG0428 SAG0428 SAG0428 442266 443303 - zinc-containing alcohol dehydrogenase identified by match to PFAM protein family HMM PF00107 gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0428 SAG0429 SAG0429 SAG0429 443413 444267 - aldo/keto reductase identified by match to PFAM protein family HMM PF00248 gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0429 SAG0430 SAG0430 SAG0430 444352 445215 - cation efflux system protein identified by match to PFAM protein family HMM PF01545 gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0430 SAG0431 SAG0431 SAG0431 445347 445871 + TetR family transcriptional regulator identified by match to PFAM protein family HMM PF00440 gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0431 SAG0432 SAG0432 SAG0432 446066 447259 - AraC family transcriptional regulator identified by match to PFAM protein family HMM PF00165 gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0432 SAG0433 SAG0433 SAG0433 447507 451676 + surface protein Rib identified by match to PFAM protein family HMM PF00746 gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0433 SAG0434 SAG0434 SAG0434 452182 452367 - This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GB:X71808 PID:405804%3B identified by sequence similarity%3B transposase%2C IS256 family%2C truncation gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0434 SAG0435 SAG0435 SAG0435 452388 452681 + DNA-damage-inducible protein J similar to PID:984582 GB:U00096 SP:Q47150 PID:1786420%3B identified by sequence similarity gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0435 SAG0436 SAG0436 SAG0436 452678 452866 + hypothetical protein gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0436 SAG0437 SAG0437 SAG0437 453019 453390 + lipoprotein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0437 SAG0438 SAG0438 SAG0438 453904 454341 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00589%3B site-specific recombinase%2C phage integrase family%2C truncation gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0438 SAG0439 SAG0439 SAG0439 454900 455461 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C degenerate gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0439 SAG0440 SAG0440 SAG0440 455763 456017 + hypothetical protein gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0440 SAG0441 SAG0441 SAG0441 456126 456437 + hypothetical protein similar to GP:13622655%3B identified by sequence similarity gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0441 SAG0442 SAG0442 SAG0442 456705 457274 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0442 SAG0443 SAG0443 SAG0443 457372 457956 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0443 SAG0444 SAG0444 SAG0444 457953 458519 + hypothetical protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0444 SAG0445 SAG0445 valS valS 458519 461170 + valyl-tRNA synthetase valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0445 SAG0446 SAG0446 SAG0446 461341 462300 + Gfo/Idh/MocA family oxidoreductase identified by match to PFAM protein family HMM PF01408 gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0446 SAG0447 SAG0447 SAG0447 462461 463324 + magnesium transporter CorA family protein identified by match to PFAM protein family HMM PF01544 gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0447 SAG0448 SAG0448 SAG0448 463371 464546 - IS256 family transposase identified by match to PFAM protein family HMM PF00872 gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0448 SAG0449 SAG0449 SAG0449 464852 465916 + hypothetical protein gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0449 SAG0450 SAG0450 asnA asnA 466030 467022 + asparagine synthetase AsnA catalyzes the formation of asparagine from aspartate and ammonia gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0450 SAG0451 SAG0451 SAG0451 467067 467516 - hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0451 SAG0452 SAG0452 SAG0452 467646 468185 + type II DNA modification methyltransferase identified by match to TIGR protein family HMM TIGR00095 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0452 SAG0453 SAG0453 SAG0453 468197 468487 + hypothetical protein gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0453 SAG0454 SAG0454 coaD coaD 468484 468969 + phosphopantetheine adenylyltransferase Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0454 SAG0455 SAG0455 SAG0455 468959 470032 + hypothetical protein gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0455 SAG0456 SAG0456 SAG0456 470107 471422 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C degenerate gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0456 SAG0457 SAG0457 SAG0457 471508 472086 + hypothetical protein gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0457 SAG0458 SAG0458 SAG0458 472137 473243 + ribosomal RNA large subunit methyltransferase N 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0458 SAG0459 SAG0459 SAG0459 473243 473758 + VanZF domain-containing protein similar to OMNI:SP0769%3B identified by sequence similarity gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0459 SAG0460 SAG0460 SAG0460 473937 475682 + ABC transporter ATP-binding protein/permease identified by match to PFAM protein family HMM PF00005 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0460 SAG0461 SAG0461 SAG0461 475672 477411 + ABC transporter ATP-binding protein/permease identified by match to PFAM protein family HMM PF00005 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0461 SAG0462 SAG0462 trpG trpG 477539 478105 + anthranilate synthase component II TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0462 SAG0463 SAG0463 SAG0463 478172 478711 - BioY family protein identified by match to PFAM protein family HMM PF02632 gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0463 SAG0464 SAG0464 bioB bioB 478712 479704 - biotin synthetase identified by match to PFAM protein family HMM PF01792 gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0464 SAG0465 SAG0465 SAG0465 479828 480322 + hypothetical protein gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0465 SAG0466 SAG0466 SAG0466 480332 481447 + thiolase identified by match to PFAM protein family HMM PF00108 gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0466 SAG0467 SAG0467 SAG0467 481440 482669 + AMP-binding protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0467 SAG0468 SAG0468 nth nth 482782 483414 + endonuclease III identified by match to PFAM protein family HMM PF00730 gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0468 SAG0469 SAG0469 SAG0469 483415 483810 - type IV prepilin peptidase-like protein similar to OMNI:SP1808%3B identified by sequence similarity gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0469 SAG0470 SAG0470 SAG0470 483965 484174 + hypothetical protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0470 SAG0471 SAG0471 glk glk 484171 485139 + glucokinase identified by match to PFAM protein family HMM PF00480 gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0471 SAG0472 SAG0472 SAG0472 485151 485531 + rhodanese-like domain-containing protein identified by match to PFAM protein family HMM PF00581%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0472 SAG0473 SAG0473 SAG0473 485763 487604 + elongation factor Tu family protein identified by match to PFAM protein family HMM PF00009 gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0473 SAG0474 SAG0474 SAG0474 487649 487894 + hypothetical protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0474 SAG0475 SAG0475 murD murD 488024 489379 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0475 SAG0476 SAG0476 murG murG 489382 490458 + undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0476 SAG0477 SAG0477 SAG0477 490462 491598 + cell division protein DivIB similar to OMNI:SP0690%3B identified by sequence similarity gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0477 SAG0478 SAG0478 ftsA ftsA 491954 493243 + cell division protein FtsA identified by match to PFAM protein family HMM PF02491 gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0478 SAG0479 SAG0479 ftsZ ftsZ 493265 494545 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0479 SAG0480 SAG0480 SAG0480 494551 495225 + hypothetical protein identified by match to PFAM protein family HMM PF01168 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0480 SAG0481 SAG0481 ylmF ylmF 495237 495842 + hypothetical protein similar to GP:4009494%3B identified by sequence similarity gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0481 SAG0482 SAG0482 SAG0482 495845 496099 + hypothetical protein identified by match to PFAM protein family HMM PF02325 gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0482 SAG0483 SAG0483 ylmH ylmH 496101 496889 + hypothetical protein identified by match to PFAM protein family HMM PF01479 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0483 SAG0484 SAG0484 SAG0484 496899 497669 + cell division protein DivIVA similar to OMNI:SP1661%3B identified by sequence similarity gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0484 SAG0485 SAG0485 ileS ileS 497954 500746 + isoleucyl-tRNA synthetase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family%3B some organisms carry two different copies of this enzyme gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0485 SAG0486 SAG0486 SAG0486 500863 501165 - hypothetical protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0486 SAG0487 SAG0487 SAG0487 501229 501684 - MutT/nudix family protein identified by match to PFAM protein family HMM PF00293 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0487 SAG0488 SAG0488 SAG0488 501870 504131 - ATP-dependent Clp protease%2C ATP-binding subunit identified by match to PFAM protein family HMM PF00004 gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0488 SAG0489 SAG0489 SAG0489 504287 504391 + hypothetical protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0489 SAG0490 SAG0490 SAG0490 504429 504659 + hypothetical protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0490 SAG0491 SAG0491 SAG0491 504801 505493 + amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0491 SAG0492 SAG0492 SAG0492 505486 506220 + amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0492 SAG0493 SAG0493 SAG0493 506507 508201 + phosphoglucomutase/phosphomannomutase family protein identified by match to PFAM protein family HMM PF00408 gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0493 SAG0494 SAG0494 folD folD 508340 509194 + bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0494 SAG0495 SAG0495 SAG0495 509191 510027 + hypothetical protein identified by match to PFAM protein family HMM PF01256%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0495 SAG0496 SAG0496 xseA xseA 510153 511493 + exodeoxyribonuclease VII large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0496 SAG0497 SAG0497 xseB xseB 511471 511686 + exodeoxyribonuclease VII small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0497 SAG0498 SAG0498 SAG0498 511686 512558 + geranyltranstransferase identified by match to PFAM protein family HMM PF00348 gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0498 SAG0499 SAG0499 SAG0499 512551 513378 + hemolysin A identified by match to PFAM protein family HMM PF01479 gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0499 SAG0500 SAG0500 SAG0500 513365 513838 + arginine repressor ArgR identified by match to PFAM protein family HMM PF01316 gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0500 SAG0501 SAG0501 recN recN 513850 515508 + DNA repair protein RecN identified by match to PFAM protein family HMM PF02463 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0501 SAG0502 SAG0502 SAG0502 515621 516457 + DegV family protein identified by match to PFAM protein family HMM PF02645%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0502 SAG0503 SAG0503 SAG0503 516450 517289 + lipase/acylhydrolase identified by match to PFAM protein family HMM PF00657%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0503 SAG0504 SAG0504 SAG0504 517264 517866 + hypothetical protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0504 SAG0505 SAG0505 hup hup 517969 518244 + DNA-binding protein HU identified by match to PFAM protein family HMM PF00216 gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0505 SAG0506 SAG0506 SAG0506 518441 518638 + hypothetical protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0506 SAG0507 SAG0507 pyrDA pyrDA 518682 519614 - dihydroorotate dehydrogenase 1A catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B subclass 1A is a dimer formed by two identical PyrD subunits each containing an FMN group gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0507 SAG0508 SAG0508 fibB fibB 519801 521036 - beta-lactam resistance factor identified by match to PFAM protein family HMM PF02388 gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0508 SAG0509 SAG0509 fibA fibA 521055 522266 - beta-lactam resistance factor identified by match to PFAM protein family HMM PF02388 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0509 SAG0510 SAG0510 SAG0510 522279 523499 - MurM protein identified by match to PFAM protein family HMM PF02388 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0510 SAG0511 SAG0511 SAG0511 523499 524311 - HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0511 SAG0512 SAG0512 SAG0512 524382 525698 - HD domain-containing protein identified by match to PFAM protein family HMM PF01966 gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0512 SAG0513 SAG0513 SAG0513 525774 526160 + hypothetical protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0513 SAG0514 SAG0514 SAG0514 526504 529188 + cation transporter E1-E2 family ATPase identified by match to PFAM protein family HMM PF00122 gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0514 SAG0515 SAG0515 SAG0515 529233 530093 - hypothetical protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0515 SAG0516 SAG0516 SAG0516 530245 532176 + fructose-1%2C6-bisphosphatase similar to PID:1064791 GB:AL009126%3B identified by sequence similarity gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0516 SAG0517 SAG0517 SAG0517 532266 533390 + (Fe-S)-binding protein identified by match to PFAM protein family HMM PF00037 gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0517 SAG0518 SAG0518 prfB prfB 533459 534557 + This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to SP:P28367 PID:216335 PID:2331287 GB:AL009126%3B identified by sequence similarity%3B peptide chain release factor 2%2C programmed frameshift gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0518 SAG0519 SAG0519 ftsE ftsE 534576 535268 + cell division ABC transporter ATP-binding protein FtsE identified by match to PFAM protein family HMM PF00005 gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0519 SAG0520 SAG0520 ftsX ftsX 535252 536181 + cell division ABC transporter permease FtsX identified by match to PFAM protein family HMM PF02687 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0520 SAG0521 SAG0521 SAG0521 536234 536944 - hypothetical protein similar to OMNI:EF0274%3B identified by sequence similarity gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0521 SAG0522 SAG0522 SAG0522 536941 537639 - metallo-beta-lactamase superfamily protein identified by match to PFAM protein family HMM PF00753 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0522 SAG0523 SAG0523 SAG0523 537807 538571 + acetoin reductase identified by match to PFAM protein family HMM PF00106 gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0523 SAG0524 SAG0524 SAG0524 538679 541186 + bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon unwinds DNA gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0524 SAG0525 SAG0525 aspC aspC 541272 542465 + aspartate aminotransferase catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0525 SAG0526 SAG0526 asnC asnC 542486 543832 + asparaginyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0526 SAG0527 SAG0527 SAG0527 543872 544429 - hypothetical protein gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0527 SAG0528 SAG0528 SAG0528 544426 545409 - inosine-uridine preferring nucleoside hydrolase identified by match to PFAM protein family HMM PF01156 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0528 SAG0529 SAG0529 SAG0529 545442 545558 - hypothetical protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0529 SAG0530 SAG0530 SAG0530 545655 546068 - OsmC/Ohr family protein identified by match to PFAM protein family HMM PF02566 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0530 SAG0531 SAG0531 SAG0531 546222 547112 + hypothetical protein gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0531 SAG0532 SAG0532 SAG0532 547109 548083 + hypothetical protein gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0532 SAG0533 SAG0533 SAG0533 548080 548991 + hypothetical protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0533 SAG0534 SAG0534 SAG0534 549006 550403 + dipeptidase similar to OMNI:NTL01LL1596%3B identified by sequence similarity gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0534 SAG0535 SAG0535 SAG0535 550545 552065 + zinc ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF01297 gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0535 SAG0536 SAG0536 rpmE2 rpmE2 552178 552438 - 50S ribosomal protein L31 RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0536 SAG0537 SAG0537 SAG0537 552547 553482 - DHH family protein identified by match to PFAM protein family HMM PF01368 gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0537 SAG0538 SAG0538 SAG0538 553748 554770 + adenosine deaminase catalyzes the formation of inosine from adenosine gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0538 SAG0539 SAG0539 SAG0539 554829 555272 + flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0539 SAG0540 SAG0540 SAG0540 555349 555624 + hypothetical protein identified by match to PFAM protein family HMM PF01817 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0540 SAG0541 SAG0541 SAG0541 555617 556813 + voltage-gated chloride channel family protein identified by match to PFAM protein family HMM PF00654 gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0541 SAG0542 SAG0542 SAG0542 557266 557649 + IS1381 transposase protein A similar to OMNI:SP0537%3B identified by sequence similarity gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0542 SAG0543 SAG0543 SAG0543 557682 558071 + IS1381 transposase protein B identified by match to PFAM protein family HMM PF01609 gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0543 SAG0544 SAG0544 rplS rplS 558254 558601 + 50S ribosomal protein L19 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0544 SAG0545 SAG0545 SAG0545 558826 559905 - prophage LambdaSa1%2C site-specific recombinase phage integrase family protein identified by match to PFAM protein family HMM PF00589 gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0545 SAG0546 SAG0546 SAG0546 560028 560231 - hypothetical protein similar to GP:2444082%3B identified by sequence similarity gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0546 SAG0547 SAG0547 SAG0547 560334 560891 - hypothetical protein gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0547 SAG0548 SAG0548 SAG0548 560893 561690 - prophage LambdaSa1%2C repressor protein identified by match to PFAM protein family HMM PF00717 gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0548 SAG0549 SAG0549 SAG0549 562051 562194 + hypothetical protein gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0549 SAG0550 SAG0550 SAG0550 562191 562415 - hypothetical protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0550 SAG0551 SAG0551 SAG0551 562474 562632 + hypothetical protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0551 SAG0552 SAG0552 SAG0552 562662 562850 + hypothetical protein gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0552 SAG0553 SAG0553 SAG0553 562833 563639 - hypothetical protein gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0553 SAG0554 SAG0554 SAG0554 563691 563882 + prophage LambdaSa1%2C Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0554 SAG0555 SAG0555 SAG0555 563950 564699 + prophage LambdaSa1%2C antirepressor gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0555 SAG0556 SAG0556 SAG0556 564711 564854 + hypothetical protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0556 SAG0557 SAG0557 SAG0557 565004 565234 + hypothetical protein gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0557 SAG0558 SAG0558 SAG0558 565372 565596 + hypothetical protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0558 SAG0559 SAG0559 SAG0559 565607 566467 + hypothetical protein gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0559 SAG0560 SAG0560 SAG0560 566448 566681 + hypothetical protein gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0560 SAG0561 SAG0561 SAG0561 566678 566818 + hypothetical protein gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0561 SAG0562 SAG0562 SAG0562 566829 567083 + hypothetical protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0562 SAG0563 SAG0563 SAG0563 567086 567247 + hypothetical protein gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0563 SAG0564 SAG0564 SAG0564 567249 567731 + hypothetical protein gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0564 SAG0565 SAG0565 SAG0565 567732 568406 + hypothetical protein similar to GP:8918764%3B identified by sequence similarity gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0565 SAG0566 SAG0566 ssb-2 ssb-2 568399 568815 + prophage LambdaSa1%2C single-strand binding protein identified by match to PFAM protein family HMM PF00436 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0566 SAG0567 SAG0567 SAG0567 569396 570715 + prophage LambdaSa1%2C reverse transcriptase/maturase family protein identified by match to PFAM protein family HMM PF00078 gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0567 SAG0568 SAG0568 SAG0568 570841 571044 + hypothetical protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0568 SAG0569 SAG0569 SAG0569 571034 571510 + hypothetical protein gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0569 SAG0570 SAG0570 SAG0570 571500 571847 + hypothetical protein gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0570 SAG0571 SAG0571 SAG0571 572165 572296 + hypothetical protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0571 SAG0572 SAG0572 SAG0572 572296 572712 + hypothetical protein gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0572 SAG0573 SAG0573 SAG0573 572709 572873 + hypothetical protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0573 SAG0574 SAG0574 SAG0574 572870 573139 + hypothetical protein gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0574 SAG0575 SAG0575 SAG0575 573142 573474 + hypothetical protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0575 SAG0576 SAG0576 SAG0576 573557 573688 + hypothetical protein gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0576 SAG0577 SAG0577 SAG0577 573781 574314 + hypothetical protein gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0577 SAG0578 SAG0578 SAG0578 574311 574577 + hypothetical protein gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0578 SAG0579 SAG0579 SAG0579 574965 575393 + hypothetical protein gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0579 SAG0580 SAG0580 SAG0580 576018 576353 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0580 SAG0581 SAG0581 SAG0581 576505 576861 + hypothetical protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0581 SAG0582 SAG0582 SAG0582 576858 578126 + hypothetical protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0582 SAG0583 SAG0583 SAG0583 578119 579339 + hypothetical protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0583 SAG0584 SAG0584 SAG0584 579339 579527 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0584 SAG0585 SAG0585 SAG0585 579635 581050 + hypothetical protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0585 SAG0586 SAG0586 SAG0586 581131 581595 + hypothetical protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0586 SAG0587 SAG0587 SAG0587 581598 582500 + prophage LambdaSa1%2C structural protein similar to PID:1353548%3B identified by sequence similarity gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0587 SAG0588 SAG0588 SAG0588 582497 582712 + hypothetical protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0588 SAG0589 SAG0589 SAG0589 582726 583157 + hypothetical protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0589 SAG0590 SAG0590 SAG0590 583108 583446 + hypothetical protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0590 SAG0591 SAG0591 SAG0591 583439 583675 + hypothetical protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0591 SAG0592 SAG0592 SAG0592 583676 584011 + hypothetical protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0592 SAG0593 SAG0593 SAG0593 584021 584578 + prophage LambdaSa1%2C structural protein similar to PID:1353554%3B identified by sequence similarity gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0593 SAG0594 SAG0594 SAG0594 584578 584823 + hypothetical protein gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0594 SAG0595 SAG0595 SAG0595 584838 585209 + hypothetical protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0595 SAG0596 SAG0596 SAG0596 585209 587221 + prophage LambdaSa1%2C pblA protein%2C internal deletion similar to GP:10732857%3B identified by sequence similarity gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0596 SAG0597 SAG0597 SAG0597 587215 588735 + prophage LambdaSa1%2C minor structural protein similar to GP:3540285%3B identified by sequence similarity gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0597 SAG0598 SAG0598 SAG0598 588736 592860 + prophage LambdaSa1%2C N-acetylmuramoyl-L-alanine amidase family protein identified by match to PFAM protein family HMM PF01832 gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0598 SAG0599 SAG0599 SAG0599 592871 594877 + prophage LambdaSa1%2C minor structural protein similar to GP:3540290%3B identified by sequence similarity gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0599 SAG0600 SAG0600 SAG0600 594903 595232 + hypothetical protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0600 SAG0601 SAG0601 SAG0601 595207 595419 + hypothetical protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0601 SAG0602 SAG0602 SAG0602 595432 595734 + hypothetical protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0602 SAG0603 SAG0603 SAG0603 595736 596071 + hypothetical protein gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0603 SAG0604 SAG0604 SAG0604 596073 596792 + prophage LambdaSa1%2C lysin similar to GP:1934766%3B identified by sequence similarity gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0604 SAG0605 SAG0605 SAG0605 597125 598096 + hypothetical protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0605 SAG0606 SAG0606 SAG0606 598200 598400 + hypothetical protein gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0606 SAG0607 SAG0607 SAG0607 598441 598611 - hypothetical protein gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0607 SAG0608 SAG0608 SAG0608 599028 599207 + hypothetical protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0608 SAG0609 SAG0609 SAG0609 599307 600190 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:2444081%3B identified by sequence similarity%3B prophage LambdaSa1%2C integrase%2C degenerate gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0609 SAG0610 SAG0610 SAG0610 600190 600594 + hypothetical protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0610 SAG0611 SAG0611 SAG0611 600756 601573 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to PID:807610%3B identified by sequence similarity%3B transposase%2C degenerate gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0611 SAG0612 SAG0612 SAG0612 601746 601907 - hypothetical protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0612 SAG0613 SAG0613 vex1 vex1 602649 603926 + transmembrane protein Vexp1 identified by match to PFAM protein family HMM PF02687 gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0613 SAG0614 SAG0614 vex2 vex2 603936 604592 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0614 SAG0615 SAG0615 vex3 vex3 604592 605968 + transmembrane protein Vexp3 identified by match to PFAM protein family HMM PF02687 gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0615 SAG0616 SAG0616 vncR vncR 606065 606718 + DNA-binding response regulator VncR identified by match to PFAM protein family HMM PF00072 gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0616 SAG0617 SAG0617 vncS vncS 606715 608034 + sensor histidine kinase VncS identified by match to PFAM protein family HMM PF00512 gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0617 SAG0618 SAG0618 SAG0618 608086 608673 - This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00665%3B transposase OrfB%2C IS3 family%2C truncation gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0618 SAG0619 SAG0619 SAG0619 608911 609111 + hypothetical protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0619 SAG0620 SAG0620 SAG0620 609153 609341 + hypothetical protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0620 SAG0621 SAG0621 rodA rodA 609766 610971 + rod shape-determining protein RodA identified by match to PFAM protein family HMM PF01098 gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0621 SAG0622 SAG0622 SAG0622 611090 611650 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0622 SAG0623 SAG0623 gyrB gyrB 611651 613603 + DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0623 SAG0624 SAG0624 SAG0624 613697 615421 + septation ring formation regulator EzrA acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0624 SAG0625 SAG0625 serB serB 615515 616156 + phosphoserine phosphatase SerB identified by match to PFAM protein family HMM PF00702 gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0625 SAG0626 SAG0626 SAG0626 616177 616662 - MutT/nudix family protein identified by match to PFAM protein family HMM PF00293 gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0626 SAG0627 SAG0627 SAG0627 616675 617130 - hypothetical protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0627 SAG0628 SAG0628 eno eno 617328 618635 + phosphopyruvate hydratase enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0628 SAG0629 SAG0629 SAG0629 618743 619807 - hypothetical protein similar to OMNI:NTL01SPL0534%3B identified by sequence similarity gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0629 SAG0630 SAG0630 aroA aroA 620036 621319 + 3-phosphoshikimate 1-carboxyvinyltransferase catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0630 SAG0631 SAG0631 aroK aroK 621312 621824 + shikimate kinase catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0631 SAG0632 SAG0632 SAG0632 621881 623254 + psr protein identified by match to TIGR protein family HMM TIGR00350 gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0632 SAG0633 SAG0633 SAG0633 623355 624710 + RNA methyltransferase identified by match to PFAM protein family HMM PF01938 gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0633 SAG0634 SAG0634 SAG0634 624827 625039 + hypothetical protein gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0634 SAG0635 SAG0635 aphA aphA 625157 625894 + acid phosphatase/phosphotransferase Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0635 SAG0636 SAG0636 SAG0636 626215 626733 + hypothetical protein gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0636 SAG0637 SAG0637 SAG0637 626862 627387 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:NTL01SPL0992%3B identified by sequence similarity%3B transcriptional regulator%2C TetR family%2C authentic frameshift gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0637 SAG0638 SAG0638 SAG0638 627570 627899 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to TIGR protein family HMM TIGR01168%3B cell wall surface anchor family protein%2C truncation gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0638 SAG0639 SAG0639 SAG0639 628019 628840 - IS5 family transposase orfB identified by match to PFAM protein family HMM PF00665 gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0639 SAG0640 SAG0640 SAG0640 628888 629163 - IS3 family transposase OrfA identified by match to PFAM protein family HMM PF01527 gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0640 SAG0641 SAG0641 SAG0641 629245 629433 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP1054%3B identified by sequence similarity%3B Tn5252%2C Orf 10 protein%2C degenerate gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0641 SAG0642 SAG0642 SAG0642 629519 629698 + hypothetical protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0642 SAG0643 SAG0643 SAG0643 629695 630167 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP2188%3B identified by sequence similarity%3B chaperonin%2C 33 kDa%2C degenerate gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0643 SAG0644 SAG0644 SAG0644 630361 631569 - AraC family transcriptional regulator identified by match to PFAM protein family HMM PF00165 gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0644 SAG0645 SAG0645 SAG0645 631950 633614 + cell wall surface anchor family protein identified by match to PFAM protein family HMM PF00746%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0645 SAG0646 SAG0646 SAG0646 633703 634626 + cell wall surface anchor family protein identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0646 SAG0647 SAG0647 SAG0647 634628 635545 + sortase family protein identified by match to TIGR protein family HMM TIGR01076 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0647 SAG0648 SAG0648 SAG0648 635571 636353 + sortase family protein identified by match to TIGR protein family HMM TIGR01076 gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0648 SAG0649 SAG0649 SAG0649 636431 639103 + cell wall surface anchor family protein similar to OMNI:SP0462%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0649 SAG0650 SAG0650 SAG0650 639378 639947 + sortase family protein identified by match to TIGR protein family HMM TIGR01076 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0650 SAG0651 SAG0651 SAG0651 640196 640801 + hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0651 SAG0652 SAG0652 SAG0652 641039 641414 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:11559696%3B identified by sequence similarity%3B Tn5252%2C Orf 28 protein%2C degenerate gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0652 SAG0653 SAG0653 SAG0653 641845 642075 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C degenerate gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0653 SAG0654 SAG0654 SAG0654 642197 642301 + hypothetical protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0654 SAG0655 SAG0655 SAG0655 642734 642907 + hypothetical protein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0655 SAG0656 SAG0656 SAG0656 643279 643389 - hypothetical protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0656 SAG0657 SAG0657 SAG0657 643420 643689 + hypothetical protein gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0657 SAG0658 SAG0658 SAG0658 643750 644901 + lipoprotein similar to OMNI:EF0746%3B identified by sequence similarity gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0658 SAG0659 SAG0659 SAG0659 645101 646093 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0659 SAG0660 SAG0660 SAG0660 646096 646914 + hypothetical protein similar to OMNI:SP0637%3B identified by sequence similarity gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0660 SAG0661 SAG0661 SAG0661 646916 647701 + hypothetical protein gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0661 SAG0662 SAG0662 SAG0662 648326 648631 + cylX protein similar to GP:4886770%3B identified by sequence similarity gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0662 SAG0663 SAG0663 cylD cylD 648631 649479 + cylD protein gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0663 SAG0664 SAG0664 cylG cylG 649476 650198 + cylG protein identified by match to PFAM protein family HMM PF00106 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0664 SAG0665 SAG0665 SAG0665 650191 650496 + acyl carrier protein gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0665 SAG0666 SAG0666 SAG0666 650480 650956 + cylZ protein identified by match to PFAM protein family HMM PF01377 gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0666 SAG0667 SAG0667 cylA cylA 650946 651875 + cylA protein identified by match to PFAM protein family HMM PF00005 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0667 SAG0668 SAG0668 cylB cylB 651868 652746 + cylB protein gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0668 SAG0669 SAG0669 cylE cylE 652743 654746 + cylE protein similar to GP:4886777%3B identified by sequence similarity gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0669 SAG0670 SAG0670 cylF cylF 654743 655696 + cylF protein identified by match to PFAM protein family HMM PF01571 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0670 SAG0671 SAG0671 cylI cylI 655693 657888 + cylI protein identified by match to PFAM protein family HMM PF00109 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0671 SAG0672 SAG0672 cylJ cylJ 657893 659104 + cylJ protein similar to GP:6007854%3B identified by sequence similarity gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0672 SAG0673 SAG0673 cylK cylK 659073 659648 + cylK protein similar to GP:6007855%3B identified by sequence similarity gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0673 SAG0674 SAG0674 SAG0674 659991 660332 + hypothetical protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0674 SAG0675 SAG0675 SAG0675 660366 660881 + secreted protein similar to SP:P16952%3B identified by sequence similarity gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0675 SAG0676 SAG0676 SAG0676 660933 663590 + proteinase identified by match to PFAM protein family HMM PF00082 gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0676 SAG0677 SAG0677 SAG0677 663693 666881 + hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0677 SAG0678 SAG0678 SAG0678 667065 669096 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:5139244%3B identified by sequence similarity%3B endopeptidase O%2C degenerate gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0678 SAG0679 SAG0679 SAG0679 669128 670159 + hypothetical protein The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0679 SAG0680 SAG0680 SAG0680 670194 671213 + hypothetical protein The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0680 SAG0681 SAG0681 SAG0681 671248 672309 + hypothetical protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0681 SAG0682 SAG0682 SAG0682 672433 673662 + permease identified by match to PFAM protein family HMM PF02687 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0682 SAG0683 SAG0683 SAG0683 673672 675024 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP0601%3B identified by sequence similarity%3B transmembrane protein Vexp3%2C degenerate gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0683 SAG0684 SAG0684 SAG0684 675121 675792 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0684 SAG0685 SAG0685 SAG0685 675849 677267 - hypothetical protein gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0685 SAG0686 SAG0686 SAG0686 677555 678340 + DNA-entry nuclease similar to SP:Q03158 GB:X54225 PID:47374%3B identified by sequence similarity gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0686 SAG0687 SAG0687 SAG0687 678418 679056 - DedA family protein identified by match to PFAM protein family HMM PF00597 gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0687 SAG0688 SAG0688 SAG0688 679273 679929 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0688 SAG0689 SAG0689 SAG0689 679926 680699 + hypothetical protein identified by match to TIGR protein family HMM TIGR00245 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0689 SAG0690 SAG0690 SAG0690 680863 681681 + hypothetical protein gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0690 SAG0691 SAG0691 SAG0691 681718 682602 - LysR family transcriptional regulator identified by match to PFAM protein family HMM PF00126 gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0691 SAG0692 SAG0692 SAG0692 682795 683376 + regulatory protein similar to GP:5901699%3B identified by sequence similarity gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0692 SAG0693 SAG0693 SAG0693 683390 684523 - IS1548 transposase identified by match to PFAM protein family HMM PF01609 gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0693 SAG0694 SAG0694 SAG0694 684657 685178 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to PID:1354775 GB:AE000520%3B identified by sequence similarity%3B regulatory protein%2C truncation gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0694 SAG0695 SAG0695 ldhA ldhA 685192 686184 + D-lactate dehydrogenase catalyzes the formation of pyruvate from lactate gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0695 SAG0696 SAG0696 SAG0696 686391 687941 + sugar transporter gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0696 SAG0697 SAG0697 SAG0697 688008 689033 + 2-keto-3-deoxygluconate kinase identified by match to PFAM protein family HMM PF00294 gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0697 SAG0698 SAG0698 SAG0698 689050 690849 + beta-D-glucuronidase identified by match to PFAM protein family HMM PF00703 gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0698 SAG0699 SAG0699 SAG0699 690878 691549 + GntR family transcriptional regulator identified by match to PFAM protein family HMM PF00392 gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0699 SAG0700 SAG0700 eda-1 eda-1 691666 692283 + 2-dehydro-3-deoxyphosphooctonate aldolase identified by match to PFAM protein family HMM PF01081 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0700 SAG0701 SAG0701 uxaC uxaC 692300 693700 + glucuronate isomerase catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0701 SAG0702 SAG0702 uxuA uxuA 693718 694764 + mannonate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0702 SAG0703 SAG0703 SAG0703 694888 695727 + D-mannonate oxidoreductase Converts D-mannonate to D-mannuronate gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0703 SAG0704 SAG0704 SAG0704 695880 696692 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0704 SAG0705 SAG0705 SAG0705 696708 698498 + glycosyl hydrolase family protein identified by match to PFAM protein family HMM PF00933 gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0705 SAG0706 SAG0706 pepQ pepQ 698556 699641 - proline dipeptidase identified by match to PFAM protein family HMM PF00557 gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0706 SAG0707 SAG0707 SAG0707 699851 700855 + RegM family transcriptional regulator identified by match to PFAM protein family HMM PF00356 gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0707 SAG0708 SAG0708 SAG0708 700987 702453 + alpha-amylase converts 1%2C4-alpha-D-glucans to maltodextrin gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0708 SAG0709 SAG0709 SAG0709 702498 703496 + glycoside hydrolase family protein identified by match to PFAM protein family HMM PF00534 gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0709 SAG0710 SAG0710 SAG0710 703498 704832 + glycoside hydrolase family protein identified by match to PFAM protein family HMM PF00534 gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0710 SAG0711 SAG0711 thrS thrS 705289 707232 + threonyl-tRNA synthetase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0711 SAG0712 SAG0712 SAG0712 707454 708158 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0712 SAG0713 SAG0713 SAG0713 708256 709275 + hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0713 SAG0714 SAG0714 SAG0714 709443 710009 + hypothetical protein gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0714 SAG0715 SAG0715 SAG0715 710058 710708 - amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0715 SAG0716 SAG0716 SAG0716 710720 711415 - amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0716 SAG0717 SAG0717 SAG0717 711428 712228 - amino acid ABC transporter amino acid-binding protein identified by match to PFAM protein family HMM PF00497 gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0717 SAG0718 SAG0718 SAG0718 712240 712995 - amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0718 SAG0719 SAG0719 SAG0719 713335 714045 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0719 SAG0720 SAG0720 SAG0720 714038 715387 + sensory box histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0720 SAG0721 SAG0721 SAG0721 715391 716200 + metallo-beta-lactamase superfamily protein identified by match to PFAM protein family HMM PF00753 gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0721 SAG0722 SAG0722 SAG0722 716203 716571 + hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0722 SAG0723 SAG0723 rnc rnc 716723 717433 + ribonuclease III cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0723 SAG0724 SAG0724 SAG0724 717441 720980 + chromosome segregation protein SMC identified by match to PFAM protein family HMM PF02463%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0724 SAG0725 SAG0725 SAG0725 721071 721868 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0725 SAG0726 SAG0726 SAG0726 721868 722692 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0726 SAG0727 SAG0727 ftsY ftsY 722692 724302 + signal recognition particle-docking protein FtsY identified by match to PFAM protein family HMM PF00448 gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0727 SAG0728 SAG0728 SAG0728 724339 725151 - hypothetical protein similar to OMNI:NTL01SPL0427%3B identified by sequence similarity gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0728 SAG0729 SAG0729 SAG0729 725151 726053 - ABC transporter permease similar to OMNI:NTL01SPL0428%3B identified by sequence similarity gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0729 SAG0730 SAG0730 SAG0730 726059 726187 - hypothetical protein similar to OMNI:NTL01SPL0429%3B identified by sequence similarity gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0730 SAG0731 SAG0731 SAG0731 726320 727363 + luciferase family protein identified by match to PFAM protein family HMM PF00296 gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0731 SAG0732 SAG0732 SAG0732 727468 729630 + transcriptional accessory protein Tex identified by match to PFAM protein family HMM PF00575 gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0732 SAG0733 SAG0733 SAG0733 729623 730051 + hypothetical protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0733 SAG0734 SAG0734 SAG0734 730132 730395 + phage shock protein C similar to SP:P23855 GB:X57560 PID:42541 GB:U00096 PID:1742136%3B identified by sequence similarity gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0734 SAG0735 SAG0735 SAG0735 730373 730507 + hypothetical protein gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0735 SAG0736 SAG0736 hprK hprK 730623 731558 + HPr kinase/phosphorylase catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0736 SAG0737 SAG0737 lgt lgt 731551 732324 + prolipoprotein diacylglyceryl transferase transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0737 SAG0738 SAG0738 SAG0738 732339 732737 + hypothetical protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0738 SAG0739 SAG0739 SAG0739 732734 733165 + hypothetical protein gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0739 SAG0740 SAG0740 SAG0740 733206 733481 - hypothetical protein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0740 SAG0741 SAG0741 SAG0741 733836 734747 + hypothetical protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0741 SAG0742 SAG0742 SAG0742 734877 736163 + U32 family peptidase identified by match to PFAM protein family HMM PF01136 gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0742 SAG0743 SAG0743 SAG0743 736290 736502 + hypothetical protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0743 SAG0744 SAG0744 SAG0744 736626 737423 + hypothetical protein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0744 SAG0745 SAG0745 SAG0745 737525 738865 - Mn2+/Fe2+ transporter identified by match to PFAM protein family HMM PF01566 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0745 SAG0746 SAG0746 ribD ribD 739594 740703 + riboflavin biosynthesis protein RibD identified by match to PFAM protein family HMM PF00383 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0746 SAG0747 SAG0747 ribE ribE 740684 741334 + riboflavin synthase subunit alpha catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0747 SAG0748 SAG0748 ribA ribA 741352 742545 + riboflavin biosynthesis protein RibA identified by match to PFAM protein family HMM PF00925 gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0748 SAG0749 SAG0749 ribH ribH 742560 743030 + 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0749 SAG0750 SAG0750 lysS lysS 743105 744595 - lysyl-tRNA synthetase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0750 SAG0751 SAG0751 SAG0751 744770 745672 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0751 SAG0752 SAG0752 SAG0752 745708 746349 - phosphoglycerate mutase family protein identified by match to PFAM protein family HMM PF00300 gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0752 SAG0753 SAG0753 SAG0753 746371 746844 - EbsC family transcriptional regulator gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0753 SAG0754 SAG0754 SAG0754 747139 747756 + hypothetical protein gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0754 SAG0755 SAG0755 SAG0755 747789 748637 - U32 family peptidase similar to OMNI:NTL01SPL0447%3B identified by sequence similarity gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0755 SAG0756 SAG0756 SAG0756 748793 749317 + hypothetical protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0756 SAG0757 SAG0757 SAG0757 749301 749690 + hypothetical protein similar to GP:13621804%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0757 SAG0758 SAG0758 SAG0758 749749 751548 - oligoendopeptidase F identified by match to PFAM protein family HMM PF01432 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0758 SAG0759 SAG0759 ppc ppc 751757 754552 + phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0759 SAG0760 SAG0760 SAG0760 754678 755811 + IS1548 transposase identified by match to PFAM protein family HMM PF01609 gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0760 SAG0761 SAG0761 ftsW ftsW 755984 757252 + cell cycle protein FtsW identified by match to PFAM protein family HMM PF01098 gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0761 SAG0762 SAG0762 tuf tuf 757604 758800 + elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0762 SAG0763 SAG0763 tpiA tpiA 758981 759739 + triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0763 SAG0764 SAG0764 gpmA gpmA 759916 760608 + phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0764 SAG0765 SAG0765 SAG0765 760737 762782 + penicillin-binding protein 2b identified by match to PFAM protein family HMM PF00905 gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0765 SAG0766 SAG0766 recR recR 762797 763393 + recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0766 SAG0767 SAG0767 ddl ddl 763534 764580 + D-alanyl-alanine synthetase A D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0767 SAG0768 SAG0768 murF murF 764727 766094 + UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase identified by match to PFAM protein family HMM PF01225 gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0768 SAG0769 SAG0769 SAG0769 766281 767501 + oxalate:formate antiporter identified by match to PFAM protein family HMM PF00083 gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0769 SAG0770 SAG0770 SAG0770 767630 768316 + hypothetical protein similar to OMNI:SP1668%3B identified by sequence similarity gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0770 SAG0771 SAG0771 SAG0771 768495 770033 + cell wall surface anchor family protein identified by match to TIGR protein family HMM TIGR01167 gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0771 SAG0772 SAG0772 prfC prfC 770210 771754 + peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0772 SAG0773 SAG0773 SAG0773 771840 772220 + hypothetical protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0773 SAG0774 SAG0774 SAG0774 772341 773075 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0774 SAG0775 SAG0775 SAG0775 773068 773730 + ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0775 SAG0776 SAG0776 SAG0776 773746 774576 + YaeC family protein identified by match to PFAM protein family HMM PF03180 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0776 SAG0777 SAG0777 SAG0777 774811 776397 + DEAD/DEAH box helicase identified by match to PFAM protein family HMM PF00270 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0777 SAG0778 SAG0778 SAG0778 776582 776848 - hypothetical protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0778 SAG0779 SAG0779 SAG0779 776841 777605 - hypothetical protein gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0779 SAG0780 SAG0780 SAG0780 777740 778480 + acyltransferase identified by match to PFAM protein family HMM PF01553 gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0780 SAG0781 SAG0781 celA celA 778580 779233 + competence protein CelA identified by match to PFAM protein family HMM PF00633 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0781 SAG0782 SAG0782 SAG0782 779217 781454 + DNA internalization-related competence protein ComEC/Rec2 identified by match to PFAM protein family HMM PF00753 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0782 SAG0783 SAG0783 SAG0783 781580 782389 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0783 SAG0784 SAG0784 SAG0784 782400 783344 + LacI family sugar-binding transcriptional regulator identified by match to PFAM protein family HMM PF00356 gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0784 SAG0785 SAG0785 SAG0785 783403 784395 - hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0785 SAG0786 SAG0786 SAG0786 784571 785299 + hypothetical protein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0786 SAG0787 SAG0787 holA holA 785353 786390 + DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0787 SAG0788 SAG0788 sodA sodA 786470 787078 + superoxide dismutase identified by match to PFAM protein family HMM PF00081 gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0788 SAG0789 SAG0789 SAG0789 787416 788267 + transcriptional antiterminator LicT identified by match to PFAM protein family HMM PF00874 gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0789 SAG0790 SAG0790 SAG0790 788260 790128 + PTS system beta-glucosides-specific transporter subunit IIABC identified by match to PFAM protein family HMM PF00358 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0790 SAG0791 SAG0791 bglA bglA 790145 791572 + 6-phospho-beta-glucosidase identified by match to PFAM protein family HMM PF00232 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0791 SAG0792 SAG0792 SAG0792 791641 792735 - hypothetical protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0792 SAG0793 SAG0793 garK garK 792902 794044 + glycerate kinase identified by match to PFAM protein family HMM PF02595%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0793 SAG0794 SAG0794 SAG0794 794069 795325 + GntP family permease identified by match to PFAM protein family HMM PF02447 gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0794 SAG0795 SAG0795 SAG0795 795426 796490 + hypothetical protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0795 SAG0796 SAG0796 SAG0796 796545 796988 - MarR family transcriptional regulator identified by match to PFAM protein family HMM PF01047 gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0796 SAG0797 SAG0797 queA queA 797069 798097 - S-adenosylmethionine--tRNA ribosyltransferase-isomerase Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0797 SAG0798 SAG0798 SAG0798 798250 798930 + hypothetical protein gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0798 SAG0799 SAG0799 nagB nagB 799081 799782 + glucosamine-6-phosphate isomerase identified by match to PFAM protein family HMM PF01182 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0799 SAG0800 SAG0800 SAG0800 799854 800810 - glutathione S-transferase family protein identified by match to PFAM protein family HMM PF00043 gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0800 SAG0801 SAG0801 SAG0801 800906 801625 + ribosomal small subunit pseudouridine synthase A identified by match to PFAM protein family HMM PF00849 gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0801 SAG0802 SAG0802 SAG0802 801600 801716 - hypothetical protein gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0802 SAG0803 SAG0803 SAG0803 801698 802849 + major facilitator family protein identified by match to PFAM protein family HMM PF00083 gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0803 SAG0804 SAG0804 coiA coiA 802901 803848 + competence protein CoiA similar to OMNI:SP0978%3B identified by sequence similarity gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0804 SAG0805 SAG0805 pepB pepB 803864 805669 + group B oligopeptidase PepB identified by match to PFAM protein family HMM PF01432 gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0805 SAG0806 SAG0806 SAG0806 805864 806490 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0806 SAG0807 SAG0807 SAG0807 806564 807271 + O-methyltransferase family protein identified by match to PFAM protein family HMM PF01596 gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0807 SAG0808 SAG0808 prsA prsA 807332 808261 + foldase protein PrsA cis/trans isomerase of peptidylprolyl%3B PPIase%3B membrane-bound lipoprotein gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0808 SAG0809 SAG0809 SAG0809 808503 808988 + hypothetical protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0809 SAG0810 SAG0810 alaS alaS 809004 811622 + alanyl-tRNA synthetase Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0810 SAG0811 SAG0811 SAG0811 811704 812420 + hypothetical protein similar to OMNI:NTL01BH4061%3B identified by sequence similarity gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0811 SAG0812 SAG0812 SAG0812 812508 813326 + glycosyl transferase family protein identified by match to PFAM protein family HMM PF01501 gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0812 SAG0813 SAG0813 SAG0813 813470 813715 + hypothetical protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0813 SAG0814 SAG0814 SAG0814 813754 814041 + hypothetical protein gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0814 SAG0815 SAG0815 SAG0815 814086 814301 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0815 SAG0816 SAG0816 SAG0816 814301 815062 + hypothetical protein similar to OMNI:NTL01SPL1088%3B identified by sequence similarity gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0816 SAG0817 SAG0817 SAG0817 815147 815710 - hypothetical protein similar to OMNI:NTL01SPL0446%3B identified by sequence similarity gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0817 SAG0818 SAG0818 nrdF nrdF 815951 816910 - ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0818 SAG0819 SAG0819 nrdE-2 nrdE-2 817113 819272 - ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0819 SAG0820 SAG0820 nrdH nrdH 819350 819574 - ribonucleoside-diphosphate reductase 2%2C NrdH-redoxin gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0820 SAG0821 SAG0821 ptsH ptsH 819957 820220 + phosphocarrier protein HPr identified by match to PFAM protein family HMM PF00381 gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0821 SAG0822 SAG0822 ptsI ptsI 820225 821958 + phosphoenolpyruvate-protein phosphotransferase identified by match to PFAM protein family HMM PF00391 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0822 SAG0823 SAG0823 gapN gapN 822108 823535 + glyceraldehyde-3-phosphate dehydrogenase identified by match to PFAM protein family HMM PF00171 gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0823 SAG0824 SAG0824 SAG0824 823675 824928 + polysaccharide deacetylase identified by match to PFAM protein family HMM PF01522 gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0824 SAG0825 SAG0825 SAG0825 824961 826043 - DEAD/DEAH box helicase identified by match to PFAM protein family HMM PF00270 gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0825 SAG0826 SAG0826 udk udk 826188 826817 + uridine kinase functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0826 SAG0827 SAG0827 SAG0827 826904 827401 + hypothetical protein gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0827 SAG0828 SAG0828 dnaX dnaX 827401 829065 + DNA polymerase III subunits gamma and tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0828 SAG0829 SAG0829 SAG0829 829154 829348 + hypothetical protein gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0829 SAG0830 SAG0830 SAG0830 829329 830264 - biotin--protein ligase catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0830 SAG0831 SAG0831 metK metK 830449 831645 + S-adenosylmethionine synthetase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0831 SAG0832 SAG0832 SAG0832 832166 834427 + hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0832 SAG0833 SAG0833 SAG0833 834494 835039 + hypothetical protein gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0833 SAG0834 SAG0834 SAG0834 835199 835327 + hypothetical protein gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0834 SAG0835 SAG0835 SAG0835 835435 836001 + hypothetical protein gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0835 SAG0836 SAG0836 SAG0836 835998 836552 + hypothetical protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0836 SAG0837 SAG0837 SAG0837 836556 837842 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0837 SAG0838 SAG0838 SAG0838 837797 838498 + hypothetical protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0838 SAG0839 SAG0839 SAG0839 838582 839262 + TenA family transcriptional regulator identified by match to PFAM protein family HMM PF03070 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0839 SAG0840 SAG0840 thiD thiD 839264 840061 + phosphomethylpyrimidine kinase catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0840 SAG0841 SAG0841 thiM thiM 840063 840833 + hydroxyethylthiazole kinase catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0841 SAG0842 SAG0842 thiE thiE 840847 841518 + thiamine-phosphate pyrophosphorylase Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0842 SAG0843 SAG0843 murA-1 murA-1 841645 842904 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0843 SAG0844 SAG0844 SAG0844 843006 843560 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0844 SAG0845 SAG0845 SAG0845 843553 844836 + hypothetical protein identified by match to PFAM protein family HMM PF00571 gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0845 SAG0846 SAG0846 map map 844859 845719 + methionine aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0846 SAG0847 SAG0847 SAG0847 845721 846641 + ribonuclease BN identified by match to TIGR protein family HMM TIGR00765 gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0847 SAG0848 SAG0848 SAG0848 846658 847113 - GtrA family protein similar to GB:X73124 SP:P39602 PID:413958 GB:AL009126%3B identified by sequence similarity gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0848 SAG0849 SAG0849 SAG0849 847295 847804 + hypothetical protein gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0849 SAG0850 SAG0850 ligA ligA 847944 849902 + NAD-dependent DNA ligase LigA this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0850 SAG0851 SAG0851 SAG0851 849914 850933 + lipid kinase similar to YegS from E. coli gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0851 SAG0852 SAG0852 SAG0852 850937 853237 + pullulanase identified by match to PFAM protein family HMM PF00128 gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0852 SAG0853 SAG0853 glgB glgB 853443 855311 + glycogen branching protein catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0853 SAG0854 SAG0854 glgC glgC 855353 856492 + glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0854 SAG0855 SAG0855 glgD glgD 856482 857614 + This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to SP:P39124%3B identified by sequence similarity%3B glycogen biosynthesis protein GlgD%2C authentic frameshift gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0855 SAG0856 SAG0856 glgA glgA 857611 859041 + glycogen synthase catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0856 SAG0857 SAG0857 atpE atpE 859373 859573 + ATP synthase F0F1 subunit C produces ATP from ADP in the presence of a proton gradient across the membrane%3B subunit C is part of the membrane proton channel F0 gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0857 SAG0858 SAG0858 atpB atpB 859606 860322 + ATP synthase F0F1 subunit A Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0858 SAG0859 SAG0859 atpF atpF 860340 860837 + ATP synthase F0F1 subunit B Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0859 SAG0860 SAG0860 atpH atpH 860837 861373 + ATP synthase F0F1 subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0860 SAG0861 SAG0861 atpA atpA 861389 862894 + ATP synthase F0F1 subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0861 SAG0862 SAG0862 atpG atpG 862910 863791 + ATP synthase F0F1 subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0862 SAG0863 SAG0863 atpD atpD 863865 865271 + ATP synthase F0F1 subunit beta Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0863 SAG0864 SAG0864 atpC atpC 865284 865697 + ATP synthase F0F1 subunit epsilon part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0864 SAG0865 SAG0865 SAG0865 865762 865992 + hypothetical protein gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0865 SAG0866 SAG0866 murA-2 murA-2 866055 867326 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0866 SAG0867 SAG0867 SAG0867 867328 867519 + hypothetical protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0867 SAG0868 SAG0868 endA endA 867594 868451 + DNA-entry nuclease identified by match to PFAM protein family HMM PF01223 gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0868 SAG0869 SAG0869 pheS pheS 868743 869783 + phenylalanyl-tRNA synthetase subunit alpha catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0869 SAG0870 SAG0870 SAG0870 869866 870387 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0870 SAG0871 SAG0871 pheT pheT 870441 872846 + phenylalanyl-tRNA synthetase subunit beta catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0871 SAG0872 SAG0872 SAG0872 872915 873817 - hypothetical protein gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0872 SAG0873 SAG0873 rexB rexB 873995 877228 + exonuclease RexB similar to GP:2909715%3B identified by sequence similarity%3B RexAB system found in Gram positive bacteria appears to fulfill the biological roles of RecBCD found in Gram negative bacteria. gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0873 SAG0874 SAG0874 rexA rexA 877218 880841 + exonuclease RexA identified by match to PFAM protein family HMM PF00580%3B RexAB system found in Gram positive bacteria appears to fulfill the biological roles of RecBCD found in Gram negative bacteria. gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0874 SAG0875 SAG0875 SAG0875 880854 881771 + magnesium transporter CorA family protein identified by match to PFAM protein family HMM PF01544 gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0875 SAG0876 SAG0876 trmE trmE 881804 883180 - tRNA modification GTPase TrmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0876 SAG0877 SAG0877 SAG0877 883308 885218 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0877 SAG0878 SAG0878 SAG0878 885368 886336 + acetoin dehydrogenase%2C thymine PPi dependent%2C E1 component subunit alpha identified by match to PFAM protein family HMM PF00676 gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0878 SAG0879 SAG0879 SAG0879 886411 887409 + acetoin dehydrogenase%2C thymine PPi dependent%2C E1 component subunit beta identified by match to PFAM protein family HMM PF02779 gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0879 SAG0880 SAG0880 SAG0880 887536 888924 + branched-chain alpha-keto acid dehydrogenase subunit E2 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0880 SAG0881 SAG0881 SAG0881 888984 890741 + acetoin dehydrogenase%2C thymine PPi dependent%2C E3 component%2C dihydrolipoamide dehydrogenase identified by match to PFAM protein family HMM PF00070 gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0881 SAG0882 SAG0882 lplA-1 lplA-1 890839 891828 + lipoate-protein ligase A identified by match to PFAM protein family HMM PF02539 gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0882 SAG0883 SAG0883 SAG0883 891936 892721 - cobyric acid synthase similar to OMNI:NTL01LL1120%3B identified by sequence similarity gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0883 SAG0884 SAG0884 SAG0884 892721 894064 - mur ligase family protein gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0884 SAG0885 SAG0885 SAG0885 894204 895055 + hypothetical protein gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0885 SAG0886 SAG0886 SAG0886 895058 896017 + hypothetical protein The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0886 SAG0887 SAG0887 glmM glmM 896071 897423 + phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0887 SAG0888 SAG0888 SAG0888 897546 897917 + hypothetical protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0888 SAG0889 SAG0889 SAG0889 897942 898322 + hypothetical protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0889 SAG0890 SAG0890 SAG0890 898414 899544 + coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0890 SAG0891 SAG0891 SAG0891 899548 900285 + hypothetical protein gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0891 SAG0892 SAG0892 SAG0892 900286 901056 + HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0892 SAG0893 SAG0893 SAG0893 901046 901702 + hypothetical protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0893 SAG0894 SAG0894 SAG0894 902090 906202 + hypothetical protein similar to OMNI:NTL01SPL0811%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0894 SAG0895 SAG0895 SAG0895 906204 907073 + lipoyl-binding domain-containing protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0895 SAG0896 SAG0896 SAG0896 907085 907411 + oxidoreductase similar to OMNI:NTL01SPL0813%3B identified by sequence similarity gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0896 SAG0897 SAG0897 SAG0897 907398 908063 + hypothetical protein gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0897 SAG0898 SAG0898 SAG0898 908175 908426 + hypothetical protein gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0898 SAG0899 SAG0899 SAG0899 908439 908612 + hypothetical protein gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0899 SAG0900 SAG0900 SAG0900 908847 909017 + hypothetical protein gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0900 SAG0901 SAG0901 SAG0901 909099 909482 + hypothetical protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0901 SAG0902 SAG0902 SAG0902 909460 909597 + hypothetical protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0902 SAG0903 SAG0903 SAG0903 909601 909735 + hypothetical protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0903 SAG0904 SAG0904 SAG0904 910104 910274 + hypothetical protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0904 SAG0905 SAG0905 ndk ndk 910407 910823 + nucleoside diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0905 SAG0906 SAG0906 lepA lepA 910959 912791 + GTP-binding protein LepA binds to the ribosome on the universally-conserved alpha-sarcin loop gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0906 SAG0907 SAG0907 SAG0907 913038 915671 + hypothetical protein identified by match to PFAM protein family HMM PF00560%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0907 SAG0908 SAG0908 SAG0908 915819 916430 + HD domain-containing protein identified by match to PFAM protein family HMM PF01966 gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0908 SAG0909 SAG0909 SAG0909 916439 916903 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0909 SAG0910 SAG0910 SAG0910 916903 917337 + methionine sulfoxide reductase B this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0910 SAG0911 SAG0911 SAG0911 917489 920281 + cation transporter E1-E2 family ATPase identified by match to PFAM protein family HMM PF00122 gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0911 SAG0912 SAG0912 SAG0912 920281 921384 + hypothetical protein gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0912 SAG0913 SAG0913 cat cat 921505 922143 - chloramphenicol acetyltransferase identified by match to PFAM protein family HMM PF00132 gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0913 SAG0914 SAG0914 SAG0914 922854 923465 + hypothetical protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0914 SAG0915 SAG0915 SAG0915 923639 924856 - Tn916%2C transposase identified by match to PFAM protein family HMM PF00589 gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0915 SAG0916 SAG0916 SAG0916 924938 925141 - Tn916%2C excisionase similar to SP:P27452 GB:S56948 GB:X61025 PID:47462%3B identified by sequence similarity gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0916 SAG0917 SAG0917 SAG0917 925125 925376 + Tn916 hypothetical protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0917 SAG0918 SAG0918 SAG0918 925602 925832 - Tn916 hypothetical protein gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0918 SAG0919 SAG0919 SAG0919 925829 926302 - Tn916 hypothetical protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0919 SAG0920 SAG0920 SAG0920 926480 926551 - Tn916 hypothetical protein gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0920 SAG0921 SAG0921 SAG0921 926756 927109 + Tn916%2C transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0921 SAG0922 SAG0922 SAG0922 927169 927354 - Tn916 hypothetical protein gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0922 SAG0923 SAG0923 tetM tetM 927455 929374 - tetracycline resistance protein identified by match to PFAM protein family HMM PF00009 gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0923 SAG0924 SAG0924 SAG0924 929390 929476 - tetracycline resistance determinant leader peptide regulates the transcription of tet(M) by attenuation gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0924 SAG0925 SAG0925 SAG0925 929751 930683 - Tn916 hypothetical protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0925 SAG0926 SAG0926 SAG0926 930680 931681 - Tn916%2C NLP/P60 family protein identified by match to PFAM protein family HMM PF00877 gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0926 SAG0927 SAG0927 SAG0927 931678 933855 - hypothetical protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0927 SAG0928 SAG0928 SAG0928 933858 936304 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B Tn916%2C hypothetical protein%2C authentic frameshift gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0928 SAG0929 SAG0929 SAG0929 936288 936794 - Tn916 hypothetical protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0929 SAG0930 SAG0930 SAG0930 936769 937266 - Tn916 hypothetical protein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0930 SAG0931 SAG0931 SAG0931 937383 937604 - Tn916 hypothetical protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0931 SAG0932 SAG0932 SAG0932 937647 938852 - Tn916%2C transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0932 SAG0933 SAG0933 SAG0933 939030 940415 - DNA translocase FtsK identified by match to PFAM protein family HMM PF01580 gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0933 SAG0934 SAG0934 SAG0934 940444 940830 - Tn916 hypothetical protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0934 SAG0935 SAG0935 SAG0935 940846 941160 - Tn916 hypothetical protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0935 SAG0936 SAG0936 SAG0936 941183 941302 - Tn916 hypothetical protein gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0936 SAG0937 SAG0937 SAG0937 941541 943033 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:SP1715%3B identified by sequence similarity%3B ABC transporter ATP-binding protein%2C authentic frameshift gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0937 SAG0938 SAG0938 SAG0938 943034 943402 - GntR family transcriptional regulator identified by match to PFAM protein family HMM PF00392 gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0938 SAG0939 SAG0939 dnaE dnaE 943547 946651 + DNA polymerase III DnaE Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria. gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0939 SAG0940 SAG0940 pfkA pfkA 946732 947754 + 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0940 SAG0941 SAG0941 pyk pyk 947803 949305 + pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0941 SAG0942 SAG0942 SAG0942 949476 950033 + signal peptidase I identified by match to PFAM protein family HMM PF00461 gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0942 SAG0943 SAG0943 SAG0943 950047 950190 - hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0943 SAG0944 SAG0944 glmS glmS 950302 952116 + glucosamine--fructose-6-phosphate aminotransferase Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0944 SAG0945 SAG0945 SAG0945 952293 953426 + IS1548 transposase identified by match to PFAM protein family HMM PF01609 gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0945 SAG0946 SAG0946 phnA phnA 953605 953934 + phnA protein identified by match to TIGR protein family HMM TIGR00686 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0946 SAG0947 SAG0947 SAG0947 954069 954710 + amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0947 SAG0948 SAG0948 SAG0948 954720 955349 + amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0948 SAG0949 SAG0949 SAG0949 955366 956196 + amino acid ABC transporter amino acid-binding protein identified by match to PFAM protein family HMM PF00497 gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0949 SAG0950 SAG0950 rpsT rpsT 956280 956513 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0950 SAG0951 SAG0951 coaA coaA 956582 957502 - pantothenate kinase catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0951 SAG0952 SAG0952 SAG0952 957608 958198 + hypothetical protein gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0952 SAG0953 SAG0953 cdd cdd 958524 958913 + cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0953 SAG0954 SAG0954 SAG0954 958978 960027 + hypothetical protein identified by match to PFAM protein family HMM PF02608%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0954 SAG0955 SAG0955 SAG0955 960172 961707 + sugar ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0955 SAG0956 SAG0956 SAG0956 961700 962761 + sugar ABC transporter permease gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0956 SAG0957 SAG0957 SAG0957 962763 963719 + sugar ABC transporter permease gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0957 SAG0958 SAG0958 nox-2 nox-2 963924 965294 + NADH oxidase identified by match to PFAM protein family HMM PF00070 gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0958 SAG0959 SAG0959 ldh ldh 965415 966404 - L-lactate dehydrogenase Converts (S)-lactate and NAD(+) to pyruvate and NADH gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0959 SAG0960 SAG0960 gyrA gyrA 966643 969102 + DNA gyrase subunit A negatively supercoils closed circular double-stranded DNA gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0960 SAG0961 SAG0961 srtA srtA 969109 969852 + sortase SrtA identified by match to TIGR protein family HMM TIGR01076 gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0961 SAG0962 SAG0962 SAG0962 969868 970281 + glyoxylase identified by match to PFAM protein family HMM PF00903 gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0962 SAG0963 SAG0963 SAG0963 970434 971396 + hypothetical protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0963 SAG0964 SAG0964 SAG0964 971459 972586 - Na+/H+ exchanger family protein identified by match to PFAM protein family HMM PF00999 gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0964 SAG0965 SAG0965 SAG0965 972846 973229 + IS1381 transposase protein A similar to OMNI:SP0537%3B identified by sequence similarity gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0965 SAG0966 SAG0966 SAG0966 973262 973651 + IS1381 transposase protein B identified by match to PFAM protein family HMM PF01609 gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0966 SAG0967 SAG0967 guaA guaA 973717 975279 - GMP synthase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0967 SAG0968 SAG0968 SAG0968 975492 976190 + GntR family transcriptional regulator identified by match to PFAM protein family HMM PF00392 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0968 SAG0969 SAG0969 gid gid 976304 977638 + tRNA (uracil-5-)-methyltransferase Gid TrmFO%3B Gid%3B glucose-inhibited division protein%3B similar to GidA%3B the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant%3B modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0969 SAG0970 SAG0970 SAG0970 977716 978459 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0970 SAG0971 SAG0971 SAG0971 978592 979440 + hypothetical protein identified by match to PFAM protein family HMM PF03180%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0971 SAG0972 SAG0972 SAG0972 979472 979961 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C authentic frameshift gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0972 SAG0973 SAG0973 SAG0973 980127 981089 + nisin-resistance protein gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0973 SAG0974 SAG0974 SAG0974 981115 981867 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0974 SAG0975 SAG0975 SAG0975 981869 983824 + ABC transporter permease similar to OMNI:NTL01LL1789%3B identified by sequence similarity gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0975 SAG0976 SAG0976 SAG0976 983934 984602 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0976 SAG0977 SAG0977 SAG0977 984599 985537 + sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0977 SAG0978 SAG0978 xerS xerS 985580 986650 - site-specific tyrosine recombinase XerS site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerS gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0978 SAG0979 SAG0979 SAG0979 987103 988764 + ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF00496 gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0979 SAG0980 SAG0980 SAG0980 988797 989570 - hypothetical protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0980 SAG0981 SAG0981 SAG0981 989560 990246 - satD protein similar to GP:11055964%3B identified by sequence similarity gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0981 SAG0982 SAG0982 ffh ffh 990313 991878 - signal recognition particle protein Ffh identified by match to PFAM protein family HMM PF00448 gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0982 SAG0983 SAG0983 SAG0983 991896 992228 - DNA-binding protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0983 SAG0984 SAG0984 SAG0984 992317 993630 - sensor histidine kinase CiaH identified by match to PFAM protein family HMM PF00512 gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0984 SAG0985 SAG0985 ciaR ciaR 993614 994294 - DNA-binding response regulator CiaR identified by match to PFAM protein family HMM PF00072 gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0985 SAG0986 SAG0986 pepN pepN 994456 997005 - aminopeptidase identified by match to PFAM protein family HMM PF01433 gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0986 SAG0987 SAG0987 phoU phoU 997151 997804 - phosphate transport system regulatory protein PhoU identified by match to PFAM protein family HMM PF01895 gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0987 SAG0988 SAG0988 SAG0988 997838 998596 - phosphate transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0988 SAG0989 SAG0989 SAG0989 998608 999411 - phosphate transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0989 SAG0990 SAG0990 SAG0990 999423 1000310 - phosphate ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0990 SAG0991 SAG0991 SAG0991 1000300 1001217 - phosphate ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0991 SAG0992 SAG0992 SAG0992 1001263 1002123 - phosphate ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF01449 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0992 SAG0993 SAG0993 SAG0993 1002308 1003618 - NOL1/NOP2/sun family protein identified by match to PFAM protein family HMM PF01189 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0993 SAG0994 SAG0994 SAG0994 1003686 1004450 - inositol monophosphatase identified by match to PFAM protein family HMM PF00459 gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0994 SAG0995 SAG0995 SAG0995 1004440 1004721 - hypothetical protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0995 SAG0996 SAG0996 spxA spxA 1004714 1005127 - Spx family transcriptional regulator the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters%3B in Bacillus subtilis this protein is a substrate for ClpXP protease%3B blocks transcription of the competence regulatory gene encoded by the srf operon%3B regulates a number of genes involved in thiol homeostasis including trxA and trxB%3B monomeric member of ArsC family of proteins%3B does not bind DNA%3B contains a disulfide bond between C10 and C13 which may sense disulfide stress gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0996 SAG0997 SAG0997 ribC ribC 1005170 1006102 - bifunctional riboflavin kinase/FMN adenylyltransferase catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0997 SAG0998 SAG0998 truB truB 1006115 1006999 - tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0998 SAG0999 SAG0999 SAG0999 1007091 1007522 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=SAG0999 SAG1000 SAG1000 SAG1000 1007535 1008806 - hypothetical protein gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1000 SAG1001 SAG1001 SAG1001 1008840 1009430 - hypothetical protein gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1001 SAG1002 SAG1002 SAG1002 1009537 1010415 - protease identified by match to PFAM protein family HMM PF02517 gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1002 SAG1003 SAG1003 SAG1003 1010521 1013151 - permease identified by match to PFAM protein family HMM PF02687 gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1003 SAG1004 SAG1004 SAG1004 1013163 1013864 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1004 SAG1005 SAG1005 topA topA 1014001 1016121 - DNA topoisomerase I catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1005 SAG1006 SAG1006 dprA dprA 1016216 1017058 - DprA/SMF protein DNA processing factor identified by match to PFAM protein family HMM PF02481 gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1006 SAG1007 SAG1007 SAG1007 1017196 1018224 - iron-compound ABC transporter iron-compound-binding protein identified by match to PFAM protein family HMM PF01497 gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1007 SAG1008 SAG1008 SAG1008 1018286 1019047 - iron ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1008 SAG1009 SAG1009 SAG1009 1019044 1020018 - iron ABC transporter permease identified by match to PFAM protein family HMM PF01032 gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1009 SAG1010 SAG1010 SAG1010 1020015 1020977 - iron ABC transporter permease identified by match to PFAM protein family HMM PF01032 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1010 SAG1011 SAG1011 SAG1011 1021216 1021764 - acetyltransferase identified by match to PFAM protein family HMM PF00132 gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1011 SAG1012 SAG1012 rnhB rnhB 1021785 1022546 - ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1012 SAG1013 SAG1013 rbgA rbgA 1022533 1023384 - ribosomal biogenesis GTPase essential GTPase%3B functions in ribosome assembly%3B binds a unique part of the 23S rRNA%3B interacts with ribosomal protein L25(Ctc) gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1013 SAG1014 SAG1014 SAG1014 1023660 1024232 - hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1014 SAG1015 SAG1015 SAG1015 1024433 1025917 - carbon starvation protein CstA gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1015 SAG1016 SAG1016 SAG1016 1026073 1026807 - response regulator identified by match to PFAM protein family HMM PF00072 gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1016 SAG1017 SAG1017 SAG1017 1026819 1028558 - sensor histidine kinase identified by match to PFAM protein family HMM PF02518 gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1017 SAG1018 SAG1018 SAG1018 1029094 1029216 - lipoprotein gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1018 SAG1019 SAG1019 SAG1019 1029739 1029858 - hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1019 SAG1020 SAG1020 SAG1020 1030102 1030785 - lipoprotein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1020 SAG1021 SAG1021 SAG1021 1030871 1031194 - hypothetical protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1021 SAG1022 SAG1022 SAG1022 1031542 1032075 - hypothetical protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1022 SAG1023 SAG1023 SAG1023 1032087 1032233 - hypothetical protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1023 SAG1024 SAG1024 SAG1024 1032230 1032781 - lipoprotein gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1024 SAG1025 SAG1025 SAG1025 1032786 1033235 - hypothetical protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1025 SAG1026 SAG1026 SAG1026 1033630 1035126 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:1399011%3B identified by sequence similarity%3B immunogenic secreted protein%2C degenerate gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1026 SAG1027 SAG1027 SAG1027 1035253 1035507 - hypothetical protein gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1027 SAG1028 SAG1028 SAG1028 1035528 1036118 - hypothetical protein gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1028 SAG1029 SAG1029 SAG1029 1036132 1036437 - hypothetical protein gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1029 SAG1030 SAG1030 SAG1030 1036566 1037480 - hypothetical protein similar to OMNI:SA0643%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1030 SAG1031 SAG1031 SAG1031 1037483 1037845 - hypothetical protein similar to GB:L13925 PID:466482%3B identified by sequence similarity gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1031 SAG1032 SAG1032 SAG1032 1037950 1038207 - hypothetical protein gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1032 SAG1033 SAG1033 SAG1033 1038221 1042150 - DNA translocase FtsK identified by match to PFAM protein family HMM PF01580 gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1033 SAG1034 SAG1034 SAG1034 1042461 1042628 - hypothetical protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1034 SAG1035 SAG1035 SAG1035 1042635 1043909 - hypothetical protein gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1035 SAG1036 SAG1036 SAG1036 1043909 1044151 - hypothetical protein gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1036 SAG1037 SAG1037 SAG1037 1044135 1044608 - hypothetical protein gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1037 SAG1038 SAG1038 SAG1038 1044617 1047628 - phage infection protein gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1038 SAG1039 SAG1039 SAG1039 1047710 1048000 - hypothetical protein gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1039 SAG1040 SAG1040 SAG1040 1048117 1048899 - hypothetical protein similar to GP:14588952%3B identified by sequence similarity gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1040 SAG1041 SAG1041 SAG1041 1048896 1049219 - hypothetical protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1041 SAG1042 SAG1042 carB carB 1049346 1052528 - carbamoyl phosphate synthase large subunit four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1042 SAG1043 SAG1043 carA-1 carA-1 1052559 1053635 - carbamoyl phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1043 SAG1044 SAG1044 pyrB pyrB 1053649 1054572 - aspartate carbamoyltransferase catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1044 SAG1045 SAG1045 pyrC pyrC 1054737 1056029 - dihydroorotase catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1045 SAG1046 SAG1046 pyrE pyrE 1056041 1056670 - orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1046 SAG1047 SAG1047 pyrF pyrF 1056683 1057384 - orotidine 5'-phosphate decarboxylase type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1047 SAG1048 SAG1048 SAG1048 1057597 1058829 - hypothetical protein similar to OMNI:NTL01CA2266%3B identified by sequence similarity gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1048 SAG1049 SAG1049 SAG1049 1058869 1060410 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1049 SAG1050 SAG1050 SAG1050 1060541 1060879 - This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GP:4098081%3B identified by sequence similarity%3B ribonucleotide reductase%2C truncation gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1050 SAG1051 SAG1051 asd asd 1061049 1062125 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1051 SAG1052 SAG1052 SAG1052 1062335 1062478 - cell wall surface anchor family protein gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1052 SAG1053 SAG1053 SAG1053 1063089 1063181 + hypothetical protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1053 SAG1054 SAG1054 cls cls 1063395 1064870 - cardiolipin synthetase identified by match to PFAM protein family HMM PF00614 gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1054 SAG1055 SAG1055 fhs fhs 1065109 1066779 - formate--tetrahydrofolate ligase catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1055 SAG1056 SAG1056 lplA-2 lplA-2 1066868 1067887 - lipoate-protein ligase A identified by match to PFAM protein family HMM PF02539 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1056 SAG1057 SAG1057 SAG1057 1067914 1068792 - hypothetical protein gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1057 SAG1058 SAG1058 SAG1058 1068761 1069579 - hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1058 SAG1059 SAG1059 SAG1059 1069572 1069904 - glycine cleavage system H protein identified by match to PFAM protein family HMM PF01597 gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1059 SAG1060 SAG1060 SAG1060 1069933 1070919 - luciferase family protein identified by match to PFAM protein family HMM PF00296 gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1060 SAG1061 SAG1061 SAG1061 1070916 1072115 - oxidoreductase%2C FMN-binding identified by match to PFAM protein family HMM PF00724 gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1061 SAG1062 SAG1062 SAG1062 1072108 1072956 - hypothetical protein gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1062 SAG1063 SAG1063 SAG1063 1073098 1073784 + phosphopantothenate--cysteine ligase similar to GB:L77117 PID:1591587%3B identified by sequence similarity gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1063 SAG1064 SAG1064 SAG1064 1073777 1074319 + phosphopantothenoylcysteine decarboxylase decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine. gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1064 SAG1065 SAG1065 SAG1065 1074365 1074937 + hypothetical protein similar to OMNI:NTL01SPL0962%3B identified by sequence similarity gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1065 SAG1066 SAG1066 pgm pgm 1075047 1076765 + phosphoglucomutase identified by match to PFAM protein family HMM PF00408 gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1066 SAG1067 SAG1067 SAG1067 1076837 1077373 + IS861%2C transposase OrfA gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1067 SAG1068 SAG1068 SAG1068 1077349 1078182 + IS861%2C transposase OrfB identified by match to PFAM protein family HMM PF00665 gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1068 SAG1069 SAG1069 SAG1069 1078264 1078461 - hypothetical protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1069 SAG1070 SAG1070 SAG1070 1078475 1080208 - ABC transporter ATP-binding protein/permease identified by match to PFAM protein family HMM PF00005 gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1070 SAG1071 SAG1071 SAG1071 1080209 1081930 - ABC transporter ATP-binding protein/permease identified by match to PFAM protein family HMM PF00005 gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1071 SAG1072 SAG1072 SAG1072 1081942 1082544 - hypothetical protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1072 SAG1073 SAG1073 SAG1073 1082546 1083523 - hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1073 SAG1074 SAG1074 glyA glyA 1083528 1084784 - serine hydroxymethyltransferase catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1074 SAG1075 SAG1075 SAG1075 1084876 1085427 - Sua5/YciO/YrdC/YwlC family protein identified by match to PFAM protein family HMM PF01300 gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1075 SAG1076 SAG1076 SAG1076 1085465 1086295 - HemK family modification methylase identified by match to TIGR protein family HMM TIGR00536 gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1076 SAG1077 SAG1077 prfA prfA 1086295 1087374 - peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1077 SAG1078 SAG1078 tdk tdk 1087409 1087978 - thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1078 SAG1079 SAG1079 xylM xylM 1088116 1088298 + 4-oxalocrotonate tautomerase 4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1079 SAG1080 SAG1080 SAG1080 1088274 1088417 - hypothetical protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1080 SAG1081 SAG1081 SAG1081 1088447 1089385 + ApbE family protein identified by match to PFAM protein family HMM PF02424 gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1081 SAG1082 SAG1082 SAG1082 1089403 1090005 + hypothetical protein gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1082 SAG1083 SAG1083 SAG1083 1090029 1091264 + hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1083 SAG1084 SAG1084 SAG1084 1091363 1092151 + formate/nitrite transporter family protein identified by match to PFAM protein family HMM PF01226 gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1084 SAG1085 SAG1085 pbuX pbuX 1092250 1093524 - xanthine permease identified by match to PFAM protein family HMM PF00860 gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1085 SAG1086 SAG1086 xpt xpt 1093524 1094105 - xanthine phosphoribosyltransferase Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1086 SAG1087 SAG1087 guaC guaC 1094361 1095344 - guanosine 5'-monophosphate oxidoreductase identified by match to PFAM protein family HMM PF00478 gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1087 SAG1088 SAG1088 SAG1088 1095548 1096888 - EmrB/QacA family drug resistance transporter gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1088 SAG1089 SAG1089 SAG1089 1097159 1097851 + hypothetical protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1089 SAG1090 SAG1090 SAG1090 1097922 1099922 - potassium uptake protein identified by match to PFAM protein family HMM PF02705 gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1090 SAG1091 SAG1091 SAG1091 1100057 1100707 - short chain dehydrogenase/reductase family oxidoreductase identified by match to PFAM protein family HMM PF00106 gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1091 SAG1092 SAG1092 eutD eutD 1100881 1101873 - phosphotransacetylase in Salmonella this enzyme is required for ethanolamine catabolism%3B has higher affinity for CoA than Pta gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1092 SAG1093 SAG1093 SAG1093 1101899 1102783 - ribosomal large subunit pseudouridine synthase D identified by match to PFAM protein family HMM PF00849 gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1093 SAG1094 SAG1094 ppnK ppnK 1102780 1103616 - inorganic polyphosphate/ATP-NAD kinase catalyzes the phosphorylation of NAD to NADP gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1094 SAG1095 SAG1095 SAG1095 1103591 1104262 - GTP pyrophosphokinase similar to OMNI:NTL01SPL0878%3B identified by sequence similarity gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1095 SAG1096 SAG1096 SAG1096 1104372 1104944 + hypothetical protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1096 SAG1097 SAG1097 prsA-2 prsA-2 1105121 1106095 + ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1097 SAG1098 SAG1098 iscS-1 iscS-1 1106099 1107214 + cysteine desulfurase identified by match to PFAM protein family HMM PF00266 gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1098 SAG1099 SAG1099 SAG1099 1107216 1107563 + hypothetical protein gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1099 SAG1100 SAG1100 SAG1100 1107724 1108356 + redox-sensing transcriptional repressor Rex modulates transcription in response to the NADH/NAD(+) redox state gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1100 SAG1101 SAG1101 radC radC 1108369 1109049 - DNA repair protein RadC Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1101 SAG1102 SAG1102 SAG1102 1109145 1110278 - hypothetical protein identified by match to PFAM protein family HMM PF01594 gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1102 SAG1103 SAG1103 arb arb 1110369 1111805 - 6-phospho-beta-glucosidase required for arbutin uptake and metabolism gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1103 SAG1104 SAG1104 SAG1104 1111968 1112582 - platelet activating factor gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1104 SAG1105 SAG1105 SAG1105 1112683 1113504 - HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1105 SAG1106 SAG1106 SAG1106 1114129 1115058 + AraC family transcriptional regulator identified by match to PFAM protein family HMM PF00165 gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1106 SAG1107 SAG1107 SAG1107 1115115 1116647 - voltage-gated chloride channel family protein identified by match to PFAM protein family HMM PF00654 gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1107 SAG1108 SAG1108 potD potD 1116756 1117829 - spermidine/putrescine ABC transporter spermidine/putrescine-binding protein identified by match to PFAM protein family HMM PF01547 gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1108 SAG1109 SAG1109 potC potC 1117822 1118598 - spermidine/putrescine ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1109 SAG1110 SAG1110 potB potB 1118595 1119389 - spermidine/putrescine ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1110 SAG1111 SAG1111 potA potA 1119373 1120527 - spermidine/putrescine ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1111 SAG1112 SAG1112 murB murB 1120576 1121478 - UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1112 SAG1113 SAG1113 folK folK 1121622 1122110 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase identified by match to PFAM protein family HMM PF01288 gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1113 SAG1114 SAG1114 folB folB 1122107 1122469 - dihydroneopterin aldolase identified by match to PFAM protein family HMM PF02152 gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1114 SAG1115 SAG1115 folP folP 1122471 1123274 - dihydropteroate synthase identified by match to PFAM protein family HMM PF00809 gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1115 SAG1116 SAG1116 folE folE 1123278 1123841 - GTP cyclohydrolase I involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1116 SAG1117 SAG1117 folC folC 1123860 1125122 - folylpolyglutamate synthase identified by match to TIGR protein family HMM TIGR01499 gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1117 SAG1118 SAG1118 rarD rarD 1125124 1126011 - rarD protein identified by match to PFAM protein family HMM PF00892 gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1118 SAG1119 SAG1119 thrB thrB 1125998 1126864 - homoserine kinase catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1119 SAG1120 SAG1120 hom hom 1126866 1128149 - homoserine dehydrogenase catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1120 SAG1121 SAG1121 SAG1121 1128326 1129213 + polysaccharide deacetylase identified by match to PFAM protein family HMM PF01522 gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1121 SAG1122 SAG1122 SAG1122 1129236 1130783 - transporter BCCT family protein identified by match to PFAM protein family HMM PF02028 gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1122 SAG1123 SAG1123 SAG1123 1130793 1130897 - hypothetical protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1123 SAG1124 SAG1124 SAG1124 1130926 1132302 - aldehyde dehydrogenase identified by match to PFAM protein family HMM PF00171 gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1124 SAG1125 SAG1125 SAG1125 1132376 1133383 - hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1125 SAG1126 SAG1126 SAG1126 1133491 1134177 - hypothetical protein similar to OMNI:NTL01SPL0680%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1126 SAG1127 SAG1127 SAG1127 1134596 1135936 + hypothetical protein similar to OMNI:NTL01SA1825%3B identified by sequence similarity gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1127 SAG1128 SAG1128 SAG1128 1136133 1136330 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1128 SAG1129 SAG1129 SAG1129 1136375 1136485 + hypothetical protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1129 SAG1130 SAG1130 SAG1130 1136814 1136963 + hypothetical protein gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1130 SAG1131 SAG1131 tpx tpx 1137039 1137533 - thiol peroxidase antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1131 SAG1132 SAG1132 SAG1132 1137606 1138265 - hypothetical protein gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1132 SAG1133 SAG1133 SAG1133 1138265 1139029 - hypothetical protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1133 SAG1134 SAG1134 SAG1134 1139034 1139675 - GntR family transcriptional regulator identified by match to PFAM protein family HMM PF00392 gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1134 SAG1135 SAG1135 SAG1135 1139839 1140390 - gls24 protein similar to OMNI:EF0080%3B identified by sequence similarity gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1135 SAG1136 SAG1136 SAG1136 1140412 1140609 - hypothetical protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1136 SAG1137 SAG1137 SAG1137 1140656 1141198 - gls24 protein similar to OMNI:EF0604%3B identified by sequence similarity gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1137 SAG1138 SAG1138 SAG1138 1141254 1141448 - hypothetical protein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1138 SAG1139 SAG1139 SAG1139 1141458 1142039 - hypothetical protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1139 SAG1140 SAG1140 SAG1140 1142054 1142302 - hypothetical protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1140 SAG1141 SAG1141 SAG1141 1142350 1142688 - hypothetical protein gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1141 SAG1142 SAG1142 pcrA pcrA 1143007 1145286 - ATP-dependent DNA helicase PcrA identified by match to PFAM protein family HMM PF00580 gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1142 SAG1143 SAG1143 SAG1143 1145392 1145778 - hypothetical protein gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1143 SAG1144 SAG1144 uraA uraA 1145911 1147236 - uracil permease identified by match to PFAM protein family HMM PF00860 gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1144 SAG1145 SAG1145 SAG1145 1147833 1149179 + sodium:alanine symporter family protein identified by match to PFAM protein family HMM PF01235 gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1145 SAG1146 SAG1146 SAG1146 1149243 1150478 + cation efflux family protein identified by match to PFAM protein family HMM PF01545 gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1146 SAG1147 SAG1147 SAG1147 1150637 1151029 + hypothetical protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1147 SAG1148 SAG1148 SAG1148 1151010 1151705 + hypothetical protein gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1148 SAG1149 SAG1149 SAG1149 1151774 1152397 + hypothetical protein similar to OMNI:NTL01SPL1018%3B identified by sequence similarity gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1149 SAG1150 SAG1150 rpsA rpsA 1152810 1154012 - 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1150 SAG1151 SAG1151 SAG1151 1154356 1154586 - hypothetical protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1151 SAG1152 SAG1152 ilvE ilvE 1154670 1155692 - branched-chain amino acid aminotransferase catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1152 SAG1153 SAG1153 parC parC 1155806 1158265 - DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1153 SAG1154 SAG1154 parE parE 1158399 1160360 - DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1154 SAG1155 SAG1155 SAG1155 1160462 1161100 + glycerol-3-phosphate acyltransferase PlsY involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1155 SAG1156 SAG1156 ung ung 1161166 1161819 - uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1156 SAG1157 SAG1157 SAG1157 1161918 1162403 - hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1157 SAG1158 SAG1158 neuA neuA 1162517 1163758 - CMP-N-acetylneuraminic acid synthetase NeuA identified by match to PFAM protein family HMM PF02348 gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1158 SAG1159 SAG1159 neuD neuD 1163769 1164398 - neuD protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1159 SAG1160 SAG1160 neuC neuC 1164395 1165549 - UDP-N-acetylglucosamine-2-epimerase NeuC gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1160 SAG1161 SAG1161 neuB neuB 1165626 1166651 - N-acetyl neuramic acid synthetase NeuB identified by match to PFAM protein family HMM PF01354 gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1161 SAG1162 SAG1162 cpsL cpsL 1166651 1168051 - polysaccharide biosynthesis protein CpsL identified by match to PFAM protein family HMM PF01943 gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1162 SAG1163 SAG1163 cpsK cpsK 1168048 1169004 - polysaccharide biosynthesis protein CpsK(V) similar to GP:13549137%3B identified by sequence similarity gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1163 SAG1164 SAG1164 cpsJ cpsJ 1169001 1169966 - glycosyl transferase CpsJ(V) identified by match to PFAM protein family HMM PF00535 gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1164 SAG1165 SAG1165 cpsO cpsO 1169959 1170942 - glycosyl transferase CpsO(V) identified by match to PFAM protein family HMM PF00535 gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1165 SAG1166 SAG1166 cpsN cpsN 1170946 1171833 - glycosyl transferase CpsN(V) identified by match to PFAM protein family HMM PF00535 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1166 SAG1167 SAG1167 cpsM cpsM 1171859 1172584 - polysaccharide biosynthesis protein CpsM(V) similar to GP:13549133%3B identified by sequence similarity gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1167 SAG1168 SAG1168 cpsH cpsH 1172623 1173717 - polysaccharide biosynthesis protein cpsH(V) similar to GP:13549132%3B identified by sequence similarity gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1168 SAG1169 SAG1169 cpsG cpsG 1173704 1174195 - glycosyl transferase CpsG(V) similar to GP:5823214%3B identified by sequence similarity gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1169 SAG1170 SAG1170 cpsF cpsF 1174195 1174644 - polysaccharide biosynthesis protein CpsF similar to GP:13549130%3B identified by sequence similarity gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1170 SAG1171 SAG1171 cpsE cpsE 1174668 1176056 - glycosyl transferase CpsE identified by match to PFAM protein family HMM PF02397 gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1171 SAG1172 SAG1172 cpsD cpsD 1176069 1176758 - cpsD protein identified by match to TIGR protein family HMM TIGR01007 gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1172 SAG1173 SAG1173 cpsC cpsC 1176769 1177461 - cpsC protein identified by match to PFAM protein family HMM PF02706 gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1173 SAG1174 SAG1174 cpsB cpsB 1177470 1178201 - capsular polysaccharide biosynthesis protein CpsB identified by match to PFAM protein family HMM PF02811 gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1174 SAG1175 SAG1175 cpsA cpsA 1178207 1179664 - capsular polysaccharide biosynthesis protein CpsA identified by match to TIGR protein family HMM TIGR00350 gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1175 SAG1176 SAG1176 SAG1176 1179904 1180776 + LysR family transcriptional regulator identified by match to PFAM protein family HMM PF00126 gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1176 SAG1177 SAG1177 SAG1177 1180801 1181568 - hypothetical protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1177 SAG1178 SAG1178 deoD deoD 1181577 1182287 - purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1178 SAG1179 SAG1179 SAG1179 1182271 1183527 - voltage-gated chloride channel family protein identified by match to PFAM protein family HMM PF00654 gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1179 SAG1180 SAG1180 deoD-2 deoD-2 1183529 1184338 - purine nucleoside phosphorylase catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1180 SAG1181 SAG1181 arsC arsC 1184377 1184784 - arsenate reductase gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1181 SAG1182 SAG1182 deoB-1 deoB-1 1184835 1186046 - phosphopentomutase catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1182 SAG1183 SAG1183 rpiA rpiA 1186103 1186774 - ribose-5-phosphate isomerase A Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1183 SAG1184 SAG1184 SAG1184 1187012 1187722 - hypothetical protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1184 SAG1185 SAG1185 estA estA 1187812 1188600 - tributyrin esterase similar to GP:7453518%3B identified by sequence similarity gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1185 SAG1186 SAG1186 SAG1186 1188657 1190318 - metallo-beta-lactamase superfamily protein identified by match to PFAM protein family HMM PF00753 gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1186 SAG1187 SAG1187 SAG1187 1190614 1191375 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1187 SAG1188 SAG1188 SAG1188 1191375 1192238 - ABC transporter permease gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1188 SAG1189 SAG1189 SAG1189 1192251 1193255 - hypothetical protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1189 SAG1190 SAG1190 pavA pavA 1193614 1195269 + adherence and virulence protein A similar to OMNI:SP0966%3B identified by sequence similarity gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1190 SAG1191 SAG1191 budA budA 1195323 1196042 - alpha-acetolactate decarboxylase identified by match to PFAM protein family HMM PF03306 gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1191 SAG1192 SAG1192 ilvK ilvK 1196056 1197738 - acetolactate synthase catalyzes the formation of 2-acetolactate from pyruvate in stationary phase gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1192 SAG1193 SAG1193 SAG1193 1197848 1199074 - hypothetical protein identified by match to PFAM protein family HMM PF00515 gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1193 SAG1194 SAG1194 SAG1194 1199064 1200254 - hypothetical protein identified by match to PFAM protein family HMM PF01594 gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1194 SAG1195 SAG1195 SAG1195 1200346 1200807 - MutT/nudix family protein identified by match to PFAM protein family HMM PF00293 gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1195 SAG1196 SAG1196 mutX mutX 1200797 1201279 - mutator MutT protein identified by match to PFAM protein family HMM PF00293 gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1196 SAG1197 SAG1197 SAG1197 1201497 1204715 + hyaluronate lyase identified by match to PFAM protein family HMM PF02278 gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1197 SAG1198 SAG1198 rfbB rfbB 1204767 1205813 - dTDP-glucose 4%2C6-dehydratase identified by match to PFAM protein family HMM PF01370 gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1198 SAG1199 SAG1199 SAG1199 1206020 1206613 - dTDP-4-keto-6-deoxyglucose-3%2C5-epimerase identified by match to PFAM protein family HMM PF00908 gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1199 SAG1200 SAG1200 rfbA rfbA 1206613 1207482 - glucose-1-phosphate thymidylyltransferase identified by match to PFAM protein family HMM PF00483 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1200 SAG1201 SAG1201 SAG1201 1207541 1208644 - iminodiacetate oxidase identified by match to PFAM protein family HMM PF01266 gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1201 SAG1202 SAG1202 SAG1202 1208653 1209441 - hypothetical protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1202 SAG1203 SAG1203 SAG1203 1209431 1210114 - hypothetical protein gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1203 SAG1204 SAG1204 SAG1204 1210218 1210898 - DNA replication protein DnaD identified by match to TIGR protein family HMM TIGR01446 gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1204 SAG1205 SAG1205 apt apt 1211016 1211534 - adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1205 SAG1206 SAG1206 SAG1206 1211657 1214221 - hypothetical protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1206 SAG1207 SAG1207 SAG1207 1214205 1214303 - hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1207 SAG1208 SAG1208 recJ recJ 1214373 1216571 - single-stranded-DNA-specific exonuclease RecJ identified by match to PFAM protein family HMM PF01368 gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1208 SAG1209 SAG1209 SAG1209 1216568 1217329 - short chain dehydrogenase/reductase family oxidoreductase identified by match to PFAM protein family HMM PF00106 gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1209 SAG1210 SAG1210 SAG1210 1217331 1218260 - ribonuclease Z member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1210 SAG1211 SAG1211 SAG1211 1218302 1218949 - hypothetical protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1211 SAG1212 SAG1212 hflX hflX 1218942 1220180 - GTP-binding protein HflX identified by match to TIGR protein family HMM TIGR00231 gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1212 SAG1213 SAG1213 miaA miaA 1220271 1221161 - tRNA delta(2)-isopentenylpyrophosphate transferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1213 SAG1214 SAG1214 SAG1214 1221272 1221448 + hypothetical protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1214 SAG1215 SAG1215 SAG1215 1221490 1222407 - hypothetical protein similar to OMNI:SA1184%3B identified by sequence similarity gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1215 SAG1216 SAG1216 SAG1216 1222542 1226300 - pullulanase identified by match to PFAM protein family HMM PF00128 gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1216 SAG1217 SAG1217 SAG1217 1226469 1227202 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C authentic frameshift gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1217 SAG1218 SAG1218 SAG1218 1227217 1227801 - hypothetical protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1218 SAG1219 SAG1219 SAG1219 1227898 1229304 - dipeptidase PepV divalent metal ion-dependent extracellular dipeptidase%3B able to hydrolyze a broad range of dipeptides but no tri-%2C tetra-%2C or larger oligopeptides%3B differences in the amino acid specificity of the cleavage site varies between species%3B similar to succinyl-diaminopimelate desuccinylases gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1219 SAG1220 SAG1220 SAG1220 1229351 1229953 - nitroreductase family protein identified by match to PFAM protein family HMM PF00881 gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1220 SAG1221 SAG1221 SAG1221 1230123 1231904 + This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to OMNI:NTL01SPL0640%3B identified by sequence similarity%3B glycerophosphoryl diester phosphodiesterase gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1221 SAG1222 SAG1222 uvrC uvrC 1231946 1233727 - excinuclease ABC subunit C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1222 SAG1223 SAG1223 SAG1223 1233886 1234653 + hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1223 SAG1224 SAG1224 SAG1224 1234712 1236052 - MATE efflux family protein identified by match to PFAM protein family HMM PF01554 gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1224 SAG1225 SAG1225 SAG1225 1236152 1236562 - hypothetical protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1225 SAG1226 SAG1226 SAG1226 1236572 1237069 - hypothetical protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1226 SAG1227 SAG1227 SAG1227 1237291 1237887 + hypothetical protein similar to GB:AL009126%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1227 SAG1228 SAG1228 SAG1228 1238076 1238366 + ISSdy1%2C transposase OrfA identified by match to PFAM protein family HMM PF01527 gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1228 SAG1229 SAG1229 SAG1229 1238402 1239181 + ISSdy1%2C transposase OrfB identified by match to PFAM protein family HMM PF00665 gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1229 SAG1230 SAG1230 SAG1230 1239405 1239695 + hypothetical protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1230 SAG1231 SAG1231 SAG1231 1239710 1240537 + This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to PID:929972 PID:929975%3B identified by sequence similarity%3B transposase OrfB%2C IS3 family%2C degenerate gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1231 SAG1232 SAG1232 SAG1232 1240583 1240816 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GP:2502075%3B identified by sequence similarity%3B transposase OrfB%2C IS3 family%2C truncation gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1232 SAG1233 SAG1233 SAG1233 1241015 1243483 - streptococcal histidine triad family protein identified by match to TIGR protein family HMM TIGR01363%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1233 SAG1234 SAG1234 lmb lmb 1243496 1244416 - laminin-binding surface protein identified by match to PFAM protein family HMM PF01297 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1234 SAG1235 SAG1235 SAG1235 1244650 1245927 - GBSi1%2C group II intron%2C maturase identified by match to PFAM protein family HMM PF00078 gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1235 SAG1236 SAG1236 scpB scpB 1246509 1249960 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to GB:J05229 SP:P15926 PID:552009%3B identified by sequence similarity%3B C5a peptidase%2C authentic frameshift gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1236 SAG1237 SAG1237 SAG1237 1250615 1251949 - hypothetical protein gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1237 SAG1238 SAG1238 SAG1238 1252057 1252665 - hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1238 SAG1239 SAG1239 SAG1239 1252715 1252945 - hypothetical protein gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1239 SAG1240 SAG1240 SAG1240 1253014 1253391 - This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1240 SAG1241 SAG1241 SAG1241 1253409 1253684 + IS3 family transposase OrfA identified by match to PFAM protein family HMM PF01527 gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1241 SAG1242 SAG1242 SAG1242 1253732 1253935 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GP:2160216%3B identified by sequence similarity%3B transposase OrfB%2C IS3 family%2C truncation gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1242 SAG1243 SAG1243 SAG1243 1254003 1254293 + ISSdy1%2C transposase OrfA identified by match to PFAM protein family HMM PF01527 gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1243 SAG1244 SAG1244 SAG1244 1254329 1255108 + ISSdy1%2C transposase OrfB identified by match to PFAM protein family HMM PF00665 gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1244 SAG1245 SAG1245 SAG1245 1255213 1255329 - hypothetical protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1245 SAG1246 SAG1246 SAG1246 1255316 1256485 + hypothetical protein gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1246 SAG1247 SAG1247 SAG1247 1256680 1257879 - phage integrase family site specific recombinase identified by match to PFAM protein family HMM PF00589 gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1247 SAG1248 SAG1248 SAG1248 1257902 1258129 - hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1248 SAG1249 SAG1249 SAG1249 1258408 1258632 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1249 SAG1250 SAG1250 SAG1250 1258813 1260678 - Tn5252%2C relaxase identified by match to PFAM protein family HMM PF03432 gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1250 SAG1251 SAG1251 SAG1251 1260665 1261030 - Tn5252%2C ORF 9 protein similar to OMNI:SP1055%3B identified by sequence similarity gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1251 SAG1252 SAG1252 SAG1252 1261037 1261399 - Tn5252%2C ORF 10 protein similar to OMNI:SP1054%3B identified by sequence similarity gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1252 SAG1253 SAG1253 SAG1253 1261820 1263127 - ISL3 family transposase identified by match to PFAM protein family HMM PF01610%3B This gene is located in a transposable element that also encodes two genes for a mercuric resistance operon%2C and there are two copies of the transposable element in this strain. gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1253 SAG1254 SAG1254 merA-1 merA-1 1263287 1264927 - mercuric reductase identified by match to PFAM protein family HMM PF00070 gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1254 SAG1255 SAG1255 merR-1 merR-1 1264956 1265348 - mercuric resistance operon regulatory protein MerR identified by match to PFAM protein family HMM PF00376 gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1255 SAG1256 SAG1256 SAG1256 1265909 1266337 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00665%3B IS861%2C transposase OrfB%2C truncation gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1256 SAG1257 SAG1257 SAG1257 1266612 1268741 - cation transporter E1-E2 family ATPase identified by match to PFAM protein family HMM PF00122 gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1257 SAG1258 SAG1258 cadC cadC 1268734 1269102 - cadmium efflux system accessory protein identified by match to PFAM protein family HMM PF01022 gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1258 SAG1259 SAG1259 SAG1259 1269305 1269604 + hypothetical protein gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1259 SAG1260 SAG1260 SAG1260 1269658 1270446 - hypothetical protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1260 SAG1261 SAG1261 SAG1261 1270455 1271051 + hypothetical protein gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1261 SAG1262 SAG1262 SAG1262 1271225 1273312 - cation transporter E1-E2 family ATPase identified by match to PFAM protein family HMM PF00122 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1262 SAG1263 SAG1263 SAG1263 1273737 1274281 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:EF0298%3B identified by sequence similarity%3B conserved domain protein%2C authentic frameshift gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1263 SAG1264 SAG1264 SAG1264 1274268 1274714 - transcriptional repressor CopY similar to GP:9965434%3B identified by sequence similarity gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1264 SAG1265 SAG1265 SAG1265 1275139 1275759 - cadmium resistance transporter gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1265 SAG1266 SAG1266 SAG1266 1276299 1276757 + hypothetical protein gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1266 SAG1267 SAG1267 SAG1267 1276791 1277117 + hypothetical protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1267 SAG1268 SAG1268 SAG1268 1277301 1277993 + repressor protein identified by match to PFAM protein family HMM PF01381 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1268 SAG1269 SAG1269 SAG1269 1277996 1278130 + hypothetical protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1269 SAG1270 SAG1270 SAG1270 1278136 1279551 + ImpB/MucB/SamB family protein identified by match to PFAM protein family HMM PF00817 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1270 SAG1271 SAG1271 SAG1271 1279548 1279898 + hypothetical protein gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1271 SAG1272 SAG1272 SAG1272 1279885 1280193 + hypothetical protein gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1272 SAG1273 SAG1273 SAG1273 1280202 1280558 - hypothetical protein gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1273 SAG1274 SAG1274 SAG1274 1280548 1280937 - hypothetical protein gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1274 SAG1275 SAG1275 SAG1275 1280934 1281161 - hypothetical protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1275 SAG1276 SAG1276 SAG1276 1281215 1282291 - hypothetical protein gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1276 SAG1277 SAG1277 SAG1277 1282330 1282821 - hypothetical protein gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1277 SAG1278 SAG1278 SAG1278 1283064 1283354 - hypothetical protein gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1278 SAG1279 SAG1279 SAG1279 1283368 1283667 - hypothetical protein similar to GP:2735477%3B identified by sequence similarity gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1279 SAG1280 SAG1280 SAG1280 1283738 1290562 - SNF2 family protein identified by match to PFAM protein family HMM PF00176 gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1280 SAG1281 SAG1281 SAG1281 1290611 1291162 - hypothetical protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1281 SAG1282 SAG1282 SAG1282 1291146 1291337 - calcium-binding protein similar to OMNI:EF0591%3B identified by sequence similarity gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1282 SAG1283 SAG1283 ssp-5 ssp-5 1291338 1296233 - agglutinin receptor identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1283 SAG1284 SAG1284 abiGI abiGI 1296512 1297102 + abortive infection protein AbiGI similar to PID:1039476%3B identified by sequence similarity gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1284 SAG1285 SAG1285 abiGII abiGII 1297099 1297944 + abortive infection protein AbiGII similar to GP:12620628%3B identified by sequence similarity gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1285 SAG1286 SAG1286 SAG1286 1298030 1300831 - Tn5252%2C Orf28 gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1286 SAG1287 SAG1287 SAG1287 1300833 1303163 - Tn5252%2C Orf26 The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1287 SAG1288 SAG1288 SAG1288 1303141 1303494 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:11559693%3B identified by sequence similarity%3B Tn5252%2C Orf25%2C degenerate gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1288 SAG1289 SAG1289 SAG1289 1303556 1304410 - Tn5252%2C Orf23 similar to GP:11559691%3B identified by sequence similarity gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1289 SAG1290 SAG1290 SAG1290 1304429 1304671 - hypothetical protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1290 SAG1291 SAG1291 SAG1291 1304689 1306506 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF02534%3B Tn5252%2C Orf 21 protein%2C internal deletion gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1291 SAG1292 SAG1292 SAG1292 1306506 1306994 - hypothetical protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1292 SAG1293 SAG1293 SAG1293 1307071 1307655 - protease identified by match to PFAM protein family HMM PF02517 gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1293 SAG1294 SAG1294 SAG1294 1307658 1307891 - hypothetical protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1294 SAG1295 SAG1295 SAG1295 1307900 1308283 - hypothetical protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1295 SAG1296 SAG1296 SAG1296 1308294 1308722 - hypothetical protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1296 SAG1297 SAG1297 SAG1297 1308706 1310061 - C-5 cytosine-specific DNA methylase identified by match to PFAM protein family HMM PF00145 gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1297 SAG1298 SAG1298 SAG1298 1310113 1310208 - hypothetical protein gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1298 SAG1299 SAG1299 SAG1299 1310210 1311028 - hypothetical protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1299 SAG1300 SAG1300 SAG1300 1311025 1311198 - hypothetical protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1300 SAG1301 SAG1301 rplL rplL 1311397 1311762 - 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1301 SAG1302 SAG1302 rplJ rplJ 1311826 1312326 - 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1302 SAG1303 SAG1303 SAG1303 1312759 1314867 + ATP-dependent Clp protease%2C ATP-binding subunit identified by match to PFAM protein family HMM PF00004 gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1303 SAG1304 SAG1304 SAG1304 1314851 1314949 - hypothetical protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1304 SAG1305 SAG1305 mmuM mmuM 1314960 1315904 - homocysteine methyltransferase converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1305 SAG1306 SAG1306 SAG1306 1315909 1317285 - amino acid permease identified by match to PFAM protein family HMM PF00324 gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1306 SAG1307 SAG1307 SAG1307 1317415 1318065 - hypothetical protein gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1307 SAG1308 SAG1308 SAG1308 1318223 1318726 - hypothetical protein gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1308 SAG1309 SAG1309 SAG1309 1318723 1318815 - hypothetical protein gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1309 SAG1310 SAG1310 SAG1310 1318818 1319366 + TetR family transcriptional regulator identified by match to PFAM protein family HMM PF00440 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1310 SAG1311 SAG1311 engB engB 1319428 1320024 - ribosome biogenesis GTP-binding protein YsxC binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1311 SAG1312 SAG1312 clpX clpX 1320035 1321261 - ATP-dependent protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1312 SAG1313 SAG1313 SAG1313 1321291 1321461 - hypothetical protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1313 SAG1314 SAG1314 folA folA 1321479 1321973 - dihydrofolate reductase identified by match to PFAM protein family HMM PF00186 gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1314 SAG1315 SAG1315 thyA thyA 1322053 1322892 - thymidylate synthase ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1315 SAG1316 SAG1316 SAG1316 1323046 1324218 + HMG-CoA synthase identified by match to PFAM protein family HMM PF01154 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1316 SAG1317 SAG1317 SAG1317 1324220 1325503 + 3-hydroxy-3-methylglutaryl-CoA reductase identified by match to PFAM protein family HMM PF00368 gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1317 SAG1318 SAG1318 SAG1318 1325595 1326044 + hypothetical protein gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1318 SAG1319 SAG1319 SAG1319 1326049 1326693 + hemolysin III identified by match to PFAM protein family HMM PF03006 gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1319 SAG1320 SAG1320 SAG1320 1326780 1327694 + hypothetical protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1320 SAG1321 SAG1321 SAG1321 1327795 1328649 + hypothetical protein gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1321 SAG1322 SAG1322 SAG1322 1328695 1328913 - hypothetical protein similar to OMNI:SP1775%3B identified by sequence similarity gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1322 SAG1323 SAG1323 SAG1323 1328981 1329976 - isopentenyl pyrophosphate isomerase catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1323 SAG1324 SAG1324 SAG1324 1329973 1330965 - phosphomevalonate kinase identified by match to TIGR protein family HMM TIGR01220 gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1324 SAG1325 SAG1325 mvaD mvaD 1330958 1331902 - diphosphomevalonate decarboxylase identified by match to PFAM protein family HMM PF00288 gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1325 SAG1326 SAG1326 SAG1326 1331884 1332762 - mevalonate kinase identified by match to PFAM protein family HMM PF00288 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1326 SAG1327 SAG1327 SAG1327 1332878 1334107 - sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1327 SAG1328 SAG1328 SAG1328 1334107 1334793 - DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1328 SAG1329 SAG1329 SAG1329 1334795 1335421 - GTP pyrophosphokinase similar to OMNI:NTL01SPL0666%3B identified by sequence similarity gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1329 SAG1330 SAG1330 SAG1330 1335570 1335776 - hypothetical protein gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1330 SAG1331 SAG1331 SAG1331 1336428 1339367 - hypothetical protein identified by match to PFAM protein family HMM PF00746 gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1331 SAG1332 SAG1332 SAG1332 1340126 1340566 - MarR family transcriptional regulator identified by match to PFAM protein family HMM PF01047 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1332 SAG1333 SAG1333 SAG1333 1340840 1342912 + 5'-nucleotidase identified by match to PFAM protein family HMM PF00149 gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1333 SAG1334 SAG1334 SAG1334 1342949 1343359 - peptide deformylase cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+) gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1334 SAG1335 SAG1335 gdhA gdhA 1343429 1344778 - glutamate dehydrogenase converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1335 SAG1336 SAG1336 SAG1336 1344946 1345455 + hypothetical protein identified by sequence similarity gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1336 SAG1337 SAG1337 SAG1337 1345496 1347265 - ABC transporter ATP-binding protein/permease identified by match to PFAM protein family HMM PF00005 gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1337 SAG1338 SAG1338 SAG1338 1347270 1349009 - ABC transporter ATP-binding protein/permease identified by match to PFAM protein family HMM PF00005 gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1338 SAG1339 SAG1339 SAG1339 1349076 1349549 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1339 SAG1340 SAG1340 SAG1340 1349546 1351414 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1340 SAG1341 SAG1341 SAG1341 1351425 1352633 - tRNA CCA-pyrophosphorylase catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA%3B these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1341 SAG1342 SAG1342 SAG1342 1352818 1353666 - DegV family protein identified by match to PFAM protein family HMM PF02645 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1342 SAG1343 SAG1343 SAG1343 1353666 1354046 - hypothetical protein similar to OMNI:NTL01SPL0660%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1343 SAG1344 SAG1344 SAG1344 1354118 1354651 - hypothetical protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1344 SAG1345 SAG1345 SAG1345 1354702 1355196 - hypothetical protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1345 SAG1346 SAG1346 SAG1346 1355385 1357349 - PTS system fructose specific transporter subunit IIABC identified by match to PFAM protein family HMM PF00359 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1346 SAG1347 SAG1347 fruK fruK 1357346 1358257 - 1-phosphofructokinase identified by match to PFAM protein family HMM PF00294 gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1347 SAG1348 SAG1348 lacR-1 lacR-1 1358254 1358997 - lactose phosphotransferase system repressor identified by match to PFAM protein family HMM PF00455 gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1348 SAG1349 SAG1349 SAG1349 1359128 1360363 - beta-lactam resistance factor identified by match to PFAM protein family HMM PF02388 gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1349 SAG1350 SAG1350 SAG1350 1360507 1362141 - surface antigen-like protein identified by match to TIGR protein family HMM TIGR01168 gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1350 SAG1351 SAG1351 SAG1351 1362353 1363276 - 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1351 SAG1352 SAG1352 SAG1352 1363289 1364359 - hypothetical protein similar to OMNI:NTL01SPL0650%3B identified by sequence similarity gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1352 SAG1353 SAG1353 SAG1353 1364496 1365488 - pyridine nucleotide-disulfide oxidoreductase family protein identified by match to PFAM protein family HMM PF00070 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1353 SAG1354 SAG1354 trmD trmD 1365469 1366224 - tRNA (guanine-N(1)-)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1354 SAG1355 SAG1355 rimM rimM 1366211 1366729 - 16S rRNA-processing protein RimM Essential for efficient processing of 16S rRNA gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1355 SAG1356 SAG1356 SAG1356 1367051 1368562 - RofA family transcriptional regulator similar to GB:U01312 PID:460083%3B identified by sequence similarity gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1356 SAG1357 SAG1357 SAG1357 1368694 1368936 - KH domain-containing protein identified by match to PFAM protein family HMM PF00013 gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1357 SAG1358 SAG1358 rpsP rpsP 1368946 1369218 - 30S ribosomal protein S16 binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1358 SAG1359 SAG1359 SAG1359 1369347 1370594 - permease identified by match to PFAM protein family HMM PF02687 gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1359 SAG1360 SAG1360 SAG1360 1370609 1371319 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1360 SAG1361 SAG1361 SAG1361 1371322 1372566 - hypothetical protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1361 SAG1362 SAG1362 SAG1362 1372768 1374366 - carbamoyl-phosphate synthase large subunit identified by match to PFAM protein family HMM PF02787 gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1362 SAG1363 SAG1363 carA-2 carA-2 1374422 1375492 - carbamoyl phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1363 SAG1364 SAG1364 pyrR pyrR 1375541 1376062 - bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes%2C also has been shown to have uracil phosphoribosyltransferase activity gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1364 SAG1365 SAG1365 SAG1365 1376238 1377128 - ribosomal large subunit pseudouridine synthase D identified by match to PFAM protein family HMM PF00849 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1365 SAG1366 SAG1366 lspA lspA 1377112 1377576 - lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1366 SAG1367 SAG1367 SAG1367 1377585 1378490 - LysR family transcriptional regulator identified by match to PFAM protein family HMM PF00126 gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1367 SAG1368 SAG1368 rpmA rpmA 1378706 1378990 - 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1368 SAG1369 SAG1369 SAG1369 1379021 1379359 - hypothetical protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1369 SAG1370 SAG1370 rplU rplU 1379366 1379680 - 50S ribosomal protein L21 identified by match to PFAM protein family HMM PF00829 gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1370 SAG1371 SAG1371 SAG1371 1379870 1381048 - hypothetical protein gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1371 SAG1372 SAG1372 thiI thiI 1381150 1382364 - thiamine biosynthesis protein ThiI Required for the synthesis of the thiazole moiety gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1372 SAG1373 SAG1373 iscS-2 iscS-2 1382366 1383511 - cysteine desulfurase identified by match to PFAM protein family HMM PF00266 gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1373 SAG1374 SAG1374 SAG1374 1383758 1384210 + hypothetical protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1374 SAG1375 SAG1375 gor gor 1384253 1385602 - glutathione reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1375 SAG1376 SAG1376 SAG1376 1385777 1386112 - hypothetical protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1376 SAG1377 SAG1377 aroC aroC 1386196 1387362 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1377 SAG1378 SAG1378 aroB aroB 1387363 1388430 - 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1378 SAG1379 SAG1379 aroD aroD 1388524 1389201 - 3-dehydroquinate dehydratase catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1379 SAG1380 SAG1380 SAG1380 1389201 1390358 - hypothetical protein gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1380 SAG1381 SAG1381 SAG1381 1390493 1392637 + sulfatase identified by match to PFAM protein family HMM PF00884 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1381 SAG1382 SAG1382 rplT rplT 1392879 1393238 - 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1382 SAG1383 SAG1383 rpmI rpmI 1393296 1393496 - 50S ribosomal protein L35 identified by match to PFAM protein family HMM PF01632 gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1383 SAG1384 SAG1384 infC infC 1393536 1394066 - translation initiation factor IF-3 IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1384 SAG1385 SAG1385 cmk cmk 1394227 1394910 - cytidylate kinase Catalyzes the formation of (d)CDP from ATP and (d)CMP gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1385 SAG1386 SAG1386 SAG1386 1394921 1395445 - hypothetical protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1386 SAG1387 SAG1387 SAG1387 1395491 1395688 + ferredoxin%2C 4Fe-4S gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1387 SAG1388 SAG1388 SAG1388 1395675 1396166 - hypothetical protein gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1388 SAG1389 SAG1389 pepT pepT 1396195 1397415 - peptidase T catalyzes the release of the N-terminal amino acid from a tripeptide gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1389 SAG1390 SAG1390 SAG1390 1397550 1399184 - polysaccharide biosynthesis protein identified by match to PFAM protein family HMM PF01943 gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1390 SAG1391 SAG1391 murE murE 1399308 1400762 + UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1391 SAG1392 SAG1392 SAG1392 1400918 1401712 + iron ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1392 SAG1393 SAG1393 SAG1393 1401736 1402668 + iron ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF01497 gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1393 SAG1394 SAG1394 SAG1394 1402684 1403709 + iron ABC transporter permease identified by match to PFAM protein family HMM PF01032 gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1394 SAG1395 SAG1395 SAG1395 1403706 1404707 + iron ABC transporter permease identified by match to PFAM protein family HMM PF01032 gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1395 SAG1396 SAG1396 SAG1396 1404736 1405389 - hypothetical protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1396 SAG1397 SAG1397 ppa ppa 1405449 1406384 - manganese-dependent inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1397 SAG1398 SAG1398 pflA-2 pflA-2 1406501 1407289 - pyruvate formate-lyase-activating enzyme identified by match to PFAM protein family HMM PF02143 gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1398 SAG1399 SAG1399 SAG1399 1407357 1408691 - hypothetical protein identified by match to PFAM protein family HMM PF00571 gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1399 SAG1400 SAG1400 SAG1400 1408871 1409437 - hypothetical protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1400 SAG1401 SAG1401 SAG1401 1409430 1410365 - hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1401 SAG1402 SAG1402 SAG1402 1410458 1411099 - PAP2 family protein identified by match to PFAM protein family HMM PF01569 gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1402 SAG1403 SAG1403 SAG1403 1411080 1411664 - hypothetical protein similar to OMNI:NTL01SPL0281%3B identified by sequence similarity gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1403 SAG1404 SAG1404 SAG1404 1411965 1412891 - cell wall surface anchor family protein identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1404 SAG1405 SAG1405 SAG1405 1412888 1413772 - sortase family protein identified by match to TIGR protein family HMM TIGR01076%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1405 SAG1406 SAG1406 SAG1406 1413772 1414653 - sortase family protein identified by match to TIGR protein family HMM TIGR01076 gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1406 SAG1407 SAG1407 SAG1407 1414765 1416882 - cell wall surface anchor family protein identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1407 SAG1408 SAG1408 SAG1408 1417012 1419717 - cell wall surface anchor family protein gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1408 SAG1409 SAG1409 rogB rogB 1419999 1421527 + This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to GP:1289510%3B identified by sequence similarity%3B rogB protein%2C authentic frameshift gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1409 SAG1410 SAG1410 SAG1410 1421579 1422718 - glycoside hydrolase family protein identified by match to PFAM protein family HMM PF00534 gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1410 SAG1411 SAG1411 SAG1411 1422708 1423556 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1411 SAG1412 SAG1412 SAG1412 1423553 1424977 - polysaccharide biosynthesis protein identified by match to PFAM protein family HMM PF01943 gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1412 SAG1413 SAG1413 SAG1413 1424977 1426341 - hypothetical protein gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1413 SAG1414 SAG1414 SAG1414 1426343 1427269 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1414 SAG1415 SAG1415 SAG1415 1427299 1428234 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1415 SAG1416 SAG1416 SAG1416 1428236 1429294 - nucleotide sugar dehydratase gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1416 SAG1417 SAG1417 SAG1417 1429294 1430016 - nucleotidyl transferase identified by match to PFAM protein family HMM PF01128 gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1417 SAG1418 SAG1418 SAG1418 1430016 1430840 - polysaccharide biosynthesis protein similar to OMNI:EF2168%3B identified by sequence similarity gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1418 SAG1419 SAG1419 SAG1419 1430865 1432598 - hypothetical protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1419 SAG1420 SAG1420 SAG1420 1432591 1432944 - hypothetical protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1420 SAG1421 SAG1421 SAG1421 1432941 1433672 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1421 SAG1422 SAG1422 SAG1422 1433674 1434615 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1422 SAG1423 SAG1423 SAG1423 1434605 1435759 - glycosyl transferase family protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1423 SAG1424 SAG1424 rfbD rfbD 1435876 1436730 - dTDP-4-dehydrorhamnose reductase identified by match to TIGR protein family HMM TIGR01214 gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1424 SAG1425 SAG1425 SAG1425 1436820 1437161 - hypothetical protein gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1425 SAG1426 SAG1426 rpoD rpoD 1437270 1438379 - RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B primary sigma factor of bacterium gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1426 SAG1427 SAG1427 dnaG dnaG 1438387 1440195 - DNA primase synthesizes RNA primers at the replication forks gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1427 SAG1428 SAG1428 mscL mscL 1440385 1440762 + large conductance mechanosensitive channel protein identified by match to PFAM protein family HMM PF01741 gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1428 SAG1429 SAG1429 rpsU rpsU 1440859 1441035 - 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1429 SAG1430 SAG1430 SAG1430 1441139 1441642 - hypothetical protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1430 SAG1431 SAG1431 SAG1431 1441725 1442531 - amino acid ABC transporter amino acid-binding protein identified by match to PFAM protein family HMM PF00497 gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1431 SAG1432 SAG1432 SAG1432 1442856 1443899 - ammonium transporter identified by match to PFAM protein family HMM PF00909 gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1432 SAG1433 SAG1433 SAG1433 1443979 1445106 + hypothetical protein gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1433 SAG1434 SAG1434 SAG1434 1445143 1446129 - hypothetical protein identified by match to PFAM protein family HMM PF00581 gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1434 SAG1435 SAG1435 SAG1435 1446292 1446597 + hypothetical protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1435 SAG1436 SAG1436 SAG1436 1446755 1448128 - glycerol-3-phosphate transporter gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1436 SAG1437 SAG1437 SAG1437 1448236 1448403 + hypothetical protein gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1437 SAG1438 SAG1438 glgP glgP 1448544 1450808 - glycogen phosphorylase identified by match to PFAM protein family HMM PF00343 gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1438 SAG1439 SAG1439 malQ malQ 1450820 1452316 - 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1439 SAG1440 SAG1440 SAG1440 1452437 1453465 - maltose operon repressor MalR identified by match to PFAM protein family HMM PF00356 gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1440 SAG1441 SAG1441 SAG1441 1453721 1454968 + maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein identified by match to PFAM protein family HMM PF01547 gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1441 SAG1442 SAG1442 SAG1442 1455066 1456436 + maltose ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1442 SAG1443 SAG1443 SAG1443 1456436 1457272 + maltose ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1443 SAG1444 SAG1444 SAG1444 1457503 1458975 + proton/peptide symporter family protein identified by match to PFAM protein family HMM PF00854 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1444 SAG1445 SAG1445 SAG1445 1459020 1459473 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:SP1235%3B identified by sequence similarity%3B MutT/nudix family protein%2C authentic frameshift gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1445 SAG1446 SAG1446 SAG1446 1459557 1459745 - hypothetical protein gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1446 SAG1447 SAG1447 SAG1447 1459756 1461081 - hypothetical protein gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1447 SAG1448 SAG1448 SAG1448 1461074 1462582 - glycoside hydrolase family protein identified by match to PFAM protein family HMM PF00534 gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1448 SAG1449 SAG1449 azi azi 1462596 1464983 - preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B in some organisms%2C especially gram positive pathogens%2C have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1449 SAG1450 SAG1450 SAG1450 1464970 1465962 - hypothetical protein similar to OMNI:SP1760%3B identified by sequence similarity gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1450 SAG1451 SAG1451 SAG1451 1465959 1467443 - hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1451 SAG1452 SAG1452 SAG1452 1467525 1469069 - hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1452 SAG1453 SAG1453 secY secY 1469069 1470298 - preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1453 SAG1454 SAG1454 SAG1454 1470422 1471618 - hypothetical protein similar to GP:13346801%3B identified by sequence similarity gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1454 SAG1455 SAG1455 SAG1455 1471679 1472566 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1455 SAG1456 SAG1456 SAG1456 1472547 1473485 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B This gene is interrupted by an IS element%2C and contains a frameshift.%3B glycosyl transferase%2C family 8%2C degenerate gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1456 SAG1457 SAG1457 SAG1457 1473647 1474036 - IS1381 transposase protein B identified by match to PFAM protein family HMM PF01609 gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1457 SAG1458 SAG1458 SAG1458 1474069 1474452 - IS1381 transposase protein A similar to OMNI:SP0537%3B identified by sequence similarity gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1458 SAG1459 SAG1459 SAG1459 1474581 1475822 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF01501 gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1459 SAG1460 SAG1460 SAG1460 1475819 1477024 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF01501 gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1460 SAG1461 SAG1461 SAG1461 1477033 1478040 - hypothetical protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1461 SAG1462 SAG1462 SAG1462 1478371 1481283 - cell wall surface anchor family protein identified by match to PFAM protein family HMM PF00746 gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1462 SAG1463 SAG1463 SAG1463 1481666 1483162 + This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to GP:1289510%3B identified by sequence similarity%3B transcriptional regulator%2C RofA family%2C authentic point mutation gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1463 SAG1464 SAG1464 uvrB uvrB 1483259 1485250 - excinuclease ABC subunit B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1464 SAG1465 SAG1465 SAG1465 1485311 1486231 - protease identified by match to PFAM protein family HMM PF02517 gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1465 SAG1466 SAG1466 glnP glnP 1486414 1488597 + glutamine ABC transporter glutamine-binding protein/permease identified by match to PFAM protein family HMM PF00497 gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1466 SAG1467 SAG1467 SAG1467 1488597 1489337 + glutamine ABC transporter ATP-binding protein%2C GlnQ identified by match to PFAM protein family HMM PF00005 gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1467 SAG1468 SAG1468 SAG1468 1489486 1489836 + hypothetical protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1468 SAG1469 SAG1469 SAG1469 1489928 1490086 - hypothetical protein gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1469 SAG1470 SAG1470 obgE obgE 1490112 1491419 - GTPase ObgE essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1470 SAG1471 SAG1471 SAG1471 1491486 1491614 - hypothetical protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1471 SAG1472 SAG1472 pepS pepS 1491811 1493052 + aminopeptidase identified by match to PFAM protein family HMM PF02073 gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1472 SAG1473 SAG1473 SAG1473 1493086 1493664 - cell wall surface anchor family protein identified by match to TIGR protein family HMM TIGR01167 gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1473 SAG1474 SAG1474 SAG1474 1493774 1495816 - amidase identified by match to PFAM protein family HMM PF01425 gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1474 SAG1475 SAG1475 rsuA rsuA 1495901 1496623 - ribosomal small subunit pseudouridine synthase A identified by match to PFAM protein family HMM PF00849 gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1475 SAG1476 SAG1476 SAG1476 1496814 1497656 - aldo/keto reductase identified by match to PFAM protein family HMM PF00248 gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1476 SAG1477 SAG1477 SAG1477 1497923 1498597 + nitroreductase family protein identified by match to PFAM protein family HMM PF00881 gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1477 SAG1478 SAG1478 gloA gloA 1498685 1499077 + lactoylglutathione lyase identified by match to PFAM protein family HMM PF00903 gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1478 SAG1479 SAG1479 SAG1479 1499206 1500132 + glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1479 SAG1480 SAG1480 SAG1480 1500261 1501649 + amino acid permease identified by match to PFAM protein family HMM PF00324 gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1480 SAG1481 SAG1481 smpB smpB 1501733 1502200 - SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1481 SAG1482 SAG1482 vacB vacB 1502203 1504608 - VacB/Rnb family exoribonuclease identified by match to PFAM protein family HMM PF00575 gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1482 SAG1483 SAG1483 secG secG 1504721 1504957 - preprotein translocase subunit SecG gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1483 SAG1484 SAG1484 rpmG rpmG 1505004 1505150 - 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1484 SAG1485 SAG1485 SAG1485 1505147 1506316 - multi-drug resistance protein identified by match to PFAM protein family HMM PF00083 gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1485 SAG1486 SAG1486 SAG1486 1506512 1508158 - hypothetical protein gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1486 SAG1487 SAG1487 SAG1487 1508148 1508849 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1487 SAG1488 SAG1488 coaE coaE 1508973 1509560 - dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1488 SAG1489 SAG1489 mutM mutM 1509557 1510378 - formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1489 SAG1490 SAG1490 SAG1490 1510527 1511375 - MutR family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1490 SAG1491 SAG1491 SAG1491 1511592 1513184 + hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1491 SAG1492 SAG1492 SAG1492 1513220 1513396 + hypothetical protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1492 SAG1493 SAG1493 SAG1493 1513447 1513647 - hypothetical protein gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1493 SAG1494 SAG1494 SAG1494 1513840 1513938 - hypothetical protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1494 SAG1495 SAG1495 SAG1495 1514173 1514418 - CAAX amino terminal protease family protein identified by match to PFAM protein family HMM PF02517 gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1495 SAG1496 SAG1496 SAG1496 1514446 1514778 - hypothetical protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1496 SAG1497 SAG1497 SAG1497 1514880 1514993 - hypothetical protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1497 SAG1498 SAG1498 SAG1498 1515157 1515558 - hypothetical protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1498 SAG1499 SAG1499 era era 1515795 1516694 - GTP-binding protein Era Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1499 SAG1500 SAG1500 dgkA dgkA 1516736 1517134 - diacylglycerol kinase identified by match to PFAM protein family HMM PF01219 gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1500 SAG1501 SAG1501 SAG1501 1517115 1517600 - metalloprotease gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1501 SAG1502 SAG1502 SAG1502 1518007 1518813 - tetracenomycin polyketide synthesis O-methyltransferase TcmP similar to SP:P39887%3B identified by sequence similarity gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1502 SAG1503 SAG1503 SAG1503 1518858 1518977 - hypothetical protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1503 SAG1504 SAG1504 SAG1504 1519014 1519130 - hypothetical protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1504 SAG1505 SAG1505 SAG1505 1519135 1519611 - MutT/nudix family protein identified by match to PFAM protein family HMM PF00293 gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1505 SAG1506 SAG1506 SAG1506 1519803 1520606 + hypothetical protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1506 SAG1507 SAG1507 SAG1507 1520697 1521734 - PhoH family protein identified by match to PFAM protein family HMM PF02562 gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1507 SAG1508 SAG1508 SAG1508 1521807 1523579 - hypothetical protein in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1508 SAG1509 SAG1509 SAG1509 1523736 1523951 - hypothetical protein gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1509 SAG1510 SAG1510 msrA msrA 1523948 1524457 - methionine sulfoxide reductase A this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1510 SAG1511 SAG1511 SAG1511 1524595 1525449 - hypothetical protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1511 SAG1512 SAG1512 frr frr 1525567 1526124 - ribosome recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1512 SAG1513 SAG1513 pyrH pyrH 1526140 1526868 - uridylate kinase Catalyzes the phosphorylation of UMP to UDP gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1513 SAG1514 SAG1514 SAG1514 1526989 1527669 - peptide ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1514 SAG1515 SAG1515 SAG1515 1527656 1528444 - peptide ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1515 SAG1516 SAG1516 SAG1516 1528432 1529199 - peptide ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1516 SAG1517 SAG1517 SAG1517 1529238 1530182 - peptide ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1517 SAG1518 SAG1518 SAG1518 1530169 1531785 - peptide ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF00496 gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1518 SAG1519 SAG1519 rplA rplA 1532174 1532863 - 50S ribosomal protein L1 in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1519 SAG1520 SAG1520 rplK rplK 1532967 1533392 - 50S ribosomal protein L11 binds directly to 23S ribosomal RNA gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1520 SAG1521 SAG1521 SAG1521 1533654 1534820 + IS30 family transposase identified by match to PFAM protein family HMM PF00665 gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1521 SAG1522 SAG1522 SAG1522 1535154 1536536 - major facilitator transporter gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1522 SAG1523 SAG1523 SAG1523 1536544 1537758 - M20/M25/M40 family peptidase identified by match to PFAM protein family HMM PF01546 gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1523 SAG1524 SAG1524 SAG1524 1538037 1538921 + LysR family transcriptional regulator identified by match to PFAM protein family HMM PF00126 gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1524 SAG1525 SAG1525 SAG1525 1538982 1539335 + hypothetical protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1525 SAG1526 SAG1526 SAG1526 1539406 1539942 + IS861%2C transposase OrfA gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1526 SAG1527 SAG1527 SAG1527 1539918 1540751 + IS861%2C transposase OrfB identified by match to PFAM protein family HMM PF00665 gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1527 SAG1528 SAG1528 SAG1528 1540800 1542515 - chorismate binding protein identified by match to PFAM protein family HMM PF00425 gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1528 SAG1529 SAG1529 SAG1529 1542597 1545047 - DNA translocase FtsK identified by match to PFAM protein family HMM PF01580 gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1529 SAG1530 SAG1530 SAG1530 1545213 1546016 + cyclophilin type peptidyl-prolyl cis-trans isomerase identified by match to PFAM protein family HMM PF00160 gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1530 SAG1531 SAG1531 SAG1531 1546068 1546901 - manganese ABC transporter permease identified by match to PFAM protein family HMM PF00950 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1531 SAG1532 SAG1532 SAG1532 1546903 1547619 - manganese ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1532 SAG1533 SAG1533 SAG1533 1547790 1548716 - manganese ABC transporter manganese-binding adhesion liprotein identified by match to PFAM protein family HMM PF01297 gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1533 SAG1534 SAG1534 SAG1534 1548883 1549530 + iron-dependent transcriptional regulator identified by match to PFAM protein family HMM PF01325 gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1534 SAG1535 SAG1535 pfs pfs 1549570 1550259 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1535 SAG1536 SAG1536 SAG1536 1550269 1550538 - hypothetical protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1536 SAG1537 SAG1537 SAG1537 1550538 1551092 - MutT/nudix family protein identified by match to PFAM protein family HMM PF00293 gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1537 SAG1538 SAG1538 glmU glmU 1551113 1552492 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1538 SAG1539 SAG1539 SAG1539 1552634 1552729 + hypothetical protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1539 SAG1540 SAG1540 SAG1540 1552736 1553149 - hypothetical protein gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1540 SAG1541 SAG1541 SAG1541 1553162 1553539 - glyoxylase gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1541 SAG1542 SAG1542 SAG1542 1553628 1554584 - Gfo/Idh/MocA family oxidoreductase identified by match to PFAM protein family HMM PF01408 gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1542 SAG1543 SAG1543 SAG1543 1554581 1555032 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C authentic frameshift gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1543 SAG1544 SAG1544 fabG fabG 1555271 1555969 - 3-ketoacyl-ACP reductase Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1544 SAG1545 SAG1545 SAG1545 1555962 1556198 - hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1545 SAG1546 SAG1546 SAG1546 1556288 1556536 - hypothetical protein gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1546 SAG1547 SAG1547 SAG1547 1556734 1557234 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1547 SAG1548 SAG1548 SAG1548 1557474 1558742 - glycosyl transferase family protein identified by match to PFAM protein family HMM PF00535 gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1548 SAG1549 SAG1549 SAG1549 1558750 1559133 + IS1381 transposase protein A similar to OMNI:SP0537%3B identified by sequence similarity gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1549 SAG1550 SAG1550 SAG1550 1559166 1559555 + IS1381 transposase protein B identified by match to PFAM protein family HMM PF01609 gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1550 SAG1551 SAG1551 SAG1551 1559544 1559747 - hypothetical protein gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1551 SAG1552 SAG1552 SAG1552 1559887 1562046 - hypothetical protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1552 SAG1553 SAG1553 SAG1553 1562053 1563486 - hypothetical protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1553 SAG1554 SAG1554 SAG1554 1563491 1564168 - hypothetical protein gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1554 SAG1555 SAG1555 SAG1555 1564220 1564915 - hypothetical protein gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1555 SAG1556 SAG1556 brnQ-1 brnQ-1 1565281 1566618 - branched-chain amino acid transport system II carrier protein identified by match to TIGR protein family HMM TIGR00796 gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1556 SAG1557 SAG1557 metG metG 1566814 1568811 - methionyl-tRNA synthetase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1557 SAG1558 SAG1558 tehB tehB 1568954 1569829 + tellurite resistance protein TehB with TehA confers resistance to tellurite gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1558 SAG1559 SAG1559 SAG1559 1569987 1570682 - hypothetical protein similar to OMNI:NTL01SPL0310%3B identified by sequence similarity gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1559 SAG1560 SAG1560 SAG1560 1570697 1570819 - hypothetical protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1560 SAG1561 SAG1561 SAG1561 1571018 1572235 + PTS system transporter subunit IIC gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1561 SAG1562 SAG1562 SAG1562 1572219 1573061 + hypothetical protein gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1562 SAG1563 SAG1563 exoA exoA 1573138 1573965 + exodeoxyribonuclease identified by match to PFAM protein family HMM PF01260%3B In Gram negative bacteria%2C the apparent functional equivalent is known as exodeoxyribonuclease III (xth). gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1563 SAG1564 SAG1564 SAG1564 1574005 1574361 - hypothetical protein gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1564 SAG1565 SAG1565 ogt ogt 1574363 1574839 - methylated-DNA--protein-cysteine S-methyltransferase identified by match to PFAM protein family HMM PF01035 gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1565 SAG1566 SAG1566 SAG1566 1574894 1576075 - D-isomer specific 2-hydroxyacid dehydrogenase family protein identified by match to PFAM protein family HMM PF01842 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1566 SAG1567 SAG1567 SAG1567 1576138 1576686 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1567 SAG1568 SAG1568 serC serC 1576754 1577846 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to SP:P52877 PID:1256204%3B identified by sequence similarity%3B phosphoserine aminotransferase%2C authentic frameshift gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1568 SAG1569 SAG1569 SAG1569 1577979 1578614 + copper homeostasis protein CutC similar to SP:P46719%3B identified by sequence similarity gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1569 SAG1570 SAG1570 SAG1570 1578658 1578762 - hypothetical protein gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1570 SAG1571 SAG1571 SAG1571 1578747 1578908 + hypothetical protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1571 SAG1572 SAG1572 SAG1572 1578884 1579747 - tetrapyrrole methylase family protein identified by match to PFAM protein family HMM PF00590 gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1572 SAG1573 SAG1573 SAG1573 1579753 1580079 - DNA replication intiation control protein YabA in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation%3B interacts with DnaN and DnaA gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1573 SAG1574 SAG1574 SAG1574 1580109 1580972 - DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA. gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1574 SAG1575 SAG1575 tmk tmk 1580992 1581627 - thymidylate kinase catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1575 SAG1576 SAG1576 SAG1576 1582200 1583003 + This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00665%3B transposase%2C IS30 family%2C truncation gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1576 SAG1577 SAG1577 SAG1577 1583268 1583927 - AcuB family protein identified by match to PFAM protein family HMM PF00571 gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1577 SAG1578 SAG1578 livF livF 1583946 1584656 - branched-chain amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1578 SAG1579 SAG1579 livG livG 1584656 1585420 - branched-chain amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1579 SAG1580 SAG1580 SAG1580 1585421 1586374 - branched-chain amino acid ABC transporter permease identified by match to PFAM protein family HMM PF02653 gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1580 SAG1581 SAG1581 livH livH 1586377 1587246 - branched-chain amino acid ABC transporter permease identified by match to PFAM protein family HMM PF02653 gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1581 SAG1582 SAG1582 SAG1582 1587352 1588518 - branched-chain amino acid ABC transporter substrate-binding protein gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1582 SAG1583 SAG1583 SAG1583 1588673 1588918 - hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1583 SAG1584 SAG1584 SAG1584 1589092 1590225 - IS1548 transposase identified by match to PFAM protein family HMM PF01609 gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1584 SAG1585 SAG1585 clpP clpP 1590344 1590934 - ATP-dependent Clp protease proteolytic subunit hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1585 SAG1586 SAG1586 upp upp 1591059 1591688 - uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1586 SAG1587 SAG1587 SAG1587 1591798 1592967 - class I aminotransferase identified by match to PFAM protein family HMM PF00155 gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1587 SAG1588 SAG1588 SAG1588 1593103 1593651 - RNA methyltransferase identified by match to PFAM protein family HMM PF00588 gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1588 SAG1589 SAG1589 SAG1589 1593824 1595176 - amino acid permease identified by match to PFAM protein family HMM PF00324 gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1589 SAG1590 SAG1590 trkA trkA 1595382 1596731 + potassium transporter peripheral membrane protein involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1590 SAG1591 SAG1591 SAG1591 1596748 1598175 + cation uptake protein identified by match to PFAM protein family HMM PF02386 gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1591 SAG1592 SAG1592 SAG1592 1598199 1598450 - hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1592 SAG1593 SAG1593 rluB rluB 1598450 1599172 - ribosomal large subunit pseudouridine synthase B identified by match to PFAM protein family HMM PF00849 gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1593 SAG1594 SAG1594 scpB scpB 1599162 1599746 - segregation and condensation protein B functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpA%3B forms a homodimer gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1594 SAG1595 SAG1595 scpA scpA 1599743 1600450 - segregation and condensation protein A functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpB gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1595 SAG1596 SAG1596 xerD xerD 1600450 1601190 - site-specific tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1596 SAG1597 SAG1597 SAG1597 1601180 1601653 - hypothetical protein identified by match to PFAM protein family HMM PF00571 gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1597 SAG1598 SAG1598 SAG1598 1601650 1602171 - hypothetical protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1598 SAG1599 SAG1599 SAG1599 1602153 1603127 - deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1599 SAG1600 SAG1600 murI murI 1603124 1603918 - glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1600 SAG1601 SAG1601 SAG1601 1604093 1604332 - hypothetical protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1601 SAG1602 SAG1602 SAG1602 1604490 1605032 - hypothetical protein similar to OMNI:NTL01SPL1119%3B identified by sequence similarity gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1602 SAG1603 SAG1603 SAG1603 1605094 1605615 - biotin repressor family transcriptional regulator identified by match to PFAM protein family HMM PF02829 gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1603 SAG1604 SAG1604 SAG1604 1605683 1606372 - hypothetical protein identified by match to PFAM protein family HMM PF01027 gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1604 SAG1605 SAG1605 SAG1605 1606395 1606898 - hypothetical protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1605 SAG1606 SAG1606 SAG1606 1606936 1607679 - RNA methyltransferase identified by match to PFAM protein family HMM PF00588 gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1606 SAG1607 SAG1607 SAG1607 1607711 1607989 + acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1607 SAG1608 SAG1608 SAG1608 1608074 1609006 + OxaA-like protein precursor involved in biogenesis of membrane proteins%3B Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1608 SAG1609 SAG1609 SAG1609 1609206 1609871 - amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1609 SAG1610 SAG1610 SAG1610 1609895 1610752 - amino acid ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF00497 gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1610 SAG1611 SAG1611 SAG1611 1610913 1612373 - amidase catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1611 SAG1612 SAG1612 greA greA 1612476 1612958 - transcription elongation factor GreA necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1612 SAG1613 SAG1613 SAG1613 1613031 1614833 - hypothetical protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1613 SAG1614 SAG1614 SAG1614 1614920 1615423 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1614 SAG1615 SAG1615 murC murC 1615509 1616840 - UDP-N-acetylmuramate--L-alanine ligase Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1615 SAG1616 SAG1616 SAG1616 1616850 1617467 - hypothetical protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1616 SAG1617 SAG1617 SAG1617 1617472 1617570 - hypothetical protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1617 SAG1618 SAG1618 SAG1618 1617632 1620730 - Snf2 family protein identified by match to PFAM protein family HMM PF00176%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1618 SAG1619 SAG1619 SAG1619 1620893 1622026 - IS1548 transposase identified by match to PFAM protein family HMM PF01609 gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1619 SAG1620 SAG1620 engA engA 1622211 1623521 - GTP-binding protein EngA EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1620 SAG1621 SAG1621 dnaI dnaI 1623569 1624471 - primosomal protein DnaI Primosomal protein that may act to load helicase DnaC during DNA replication gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1621 SAG1622 SAG1622 SAG1622 1624468 1625643 - hypothetical protein gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1622 SAG1623 SAG1623 nrdR nrdR 1625643 1626122 - NrdR family transcriptional regulator gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1623 SAG1624 SAG1624 csrS csrS 1626271 1627776 - sensor histidine kinase CsrS identified by match to PFAM protein family HMM PF00512 gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1624 SAG1625 SAG1625 csrR csrR 1627766 1628455 - DNA-binding response regulator CsrR identified by match to PFAM protein family HMM PF00072 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1625 SAG1626 SAG1626 SAG1626 1628690 1629223 - hypothetical protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1626 SAG1627 SAG1627 htpX htpX 1629328 1630218 - heat shock protein HtpX metalloprotease gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1627 SAG1628 SAG1628 lemA lemA 1630239 1630793 - hypothetical protein similar to OMNI:SP1284%3B identified by sequence similarity gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1628 SAG1629 SAG1629 gidB gidB 1630921 1631634 + 16S rRNA methyltransferase GidB glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1629 SAG1630 SAG1630 SAG1630 1631649 1633028 + sodium transport family protein identified by match to PFAM protein family HMM PF02386 gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1630 SAG1631 SAG1631 SAG1631 1633041 1633712 + Trk family potassium uptake protein identified by match to PFAM protein family HMM PF02254 gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1631 SAG1632 SAG1632 SAG1632 1633747 1634577 - cobalt transport family protein identified by match to PFAM protein family HMM PF02361 gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1632 SAG1633 SAG1633 SAG1633 1634570 1636246 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1633 SAG1634 SAG1634 SAG1634 1636263 1636811 - hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1634 SAG1635 SAG1635 SAG1635 1636980 1638188 - serine/threonine transporter SstT involved in the import of serine and threonine coupled with the import of sodium gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1635 SAG1636 SAG1636 brnQ-2 brnQ-2 1638364 1639731 + branched-chain amino acid transport system II carrier protein identified by match to TIGR protein family HMM TIGR00796 gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1636 SAG1637 SAG1637 adh adh 1639845 1640900 + zinc-containing alcohol dehydrogenase identified by match to PFAM protein family HMM PF00107 gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1637 SAG1638 SAG1638 SAG1638 1640949 1641641 - ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1638 SAG1639 SAG1639 SAG1639 1641638 1642708 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1639 SAG1640 SAG1640 SAG1640 1642701 1644077 - hypothetical protein identified by match to PFAM protein family HMM PF01546 gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1640 SAG1641 SAG1641 SAG1641 1644211 1645035 - YaeC family protein identified by match to PFAM protein family HMM PF03180%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1641 SAG1642 SAG1642 SAG1642 1645176 1646009 - ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF00497 gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1642 SAG1643 SAG1643 SAG1643 1646111 1646800 - glutamine amidotransferase identified by match to PFAM protein family HMM PF00117 gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1643 SAG1644 SAG1644 SAG1644 1646794 1646907 - hypothetical protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1644 SAG1645 SAG1645 SAG1645 1646955 1647671 - hypothetical protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1645 SAG1646 SAG1646 SAG1646 1647697 1647795 - hypothetical protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1646 SAG1647 SAG1647 SAG1647 1647789 1648775 - DhaKLM operon coactivator DhaQ similar to DhaK%3B in Lactococcus lactis this protein froms a stable complex with DhaS and activates transcription of the dha operon in the presence of dihydroxyacetone gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1647 SAG1648 SAG1648 SAG1648 1648785 1649321 - TetR family transcriptional regulator gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1648 SAG1649 SAG1649 SAG1649 1649385 1649498 + hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1649 SAG1650 SAG1650 SAG1650 1649495 1650484 + dihydroxyacetone kinase subunit DhaK with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1650 SAG1651 SAG1651 SAG1651 1650522 1651100 + dihydroxyacetone kinase family protein identified by match to PFAM protein family HMM PF02734 gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1651 SAG1652 SAG1652 SAG1652 1651100 1651474 + PTS system mannnose-specific transporter subunit IIA gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1652 SAG1653 SAG1653 glpF-2 glpF-2 1651484 1652197 + glycerol uptake facilitator protein identified by match to PFAM protein family HMM PF00230 gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1653 SAG1654 SAG1654 SAG1654 1652462 1652866 - hypothetical protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1654 SAG1655 SAG1655 SAG1655 1653005 1653718 - MerR family transcriptional regulator identified by match to PFAM protein family HMM PF00376 gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1655 SAG1656 SAG1656 SAG1656 1653811 1654920 - hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1656 SAG1657 SAG1657 SAG1657 1654917 1655168 - hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1657 SAG1658 SAG1658 SAG1658 1655191 1655925 - hypothetical protein gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1658 SAG1659 SAG1659 SAG1659 1655991 1656347 - iojap-like protein identified by match to PFAM protein family HMM PF02410 gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1659 SAG1660 SAG1660 SAG1660 1656349 1656870 - isochorismatase family protein identified by match to PFAM protein family HMM PF00857 gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1660 SAG1661 SAG1661 SAG1661 1656933 1657520 - hypothetical protein gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1661 SAG1662 SAG1662 nadD nadD 1657517 1658149 - nicotinic acid mononucleotide adenylyltransferase transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1662 SAG1663 SAG1663 SAG1663 1658279 1658596 - hypothetical protein gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1663 SAG1664 SAG1664 SAG1664 1658689 1659807 - GTP-binding protein YqeH in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1664 SAG1665 SAG1665 SAG1665 1659807 1660340 - HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1665 SAG1666 SAG1666 SAG1666 1660451 1661365 - hypothetical protein identified by match to PFAM protein family HMM PF00892 gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1666 SAG1667 SAG1667 gatB gatB 1661495 1662937 - aspartyl/glutamyl-tRNA amidotransferase subunit B allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1667 SAG1668 SAG1668 gatA gatA 1662937 1664403 - aspartyl/glutamyl-tRNA amidotransferase subunit A allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1668 SAG1669 SAG1669 gatC gatC 1664403 1664705 - aspartyl/glutamyl-tRNA amidotransferase subunit C allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA%3B some Mycoplasma proteins contain an N-terminal fusion to an unknown domain gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1669 SAG1670 SAG1670 ppdK ppdK 1664843 1667488 - pyruvate phosphate dikinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1670 SAG1671 SAG1671 SAG1671 1667501 1668331 - hypothetical protein similar to OMNI:NTL01BH1376%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1671 SAG1672 SAG1672 SAG1672 1668342 1668854 - hypothetical protein identified by match to PFAM protein family HMM PF00571%3B In pairwise matches%2C the initiation methionine is located 40 residues upstream from the current start site of this gene%3B although there is strong sequence similarity%2C this ORF lacks an initiation codon in that upstream region. gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1672 SAG1673 SAG1673 SAG1673 1669160 1670125 + 3-hydroxybutyryl-CoA dehydrogenase converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1673 SAG1674 SAG1674 SAG1674 1670172 1670720 - isochorismatase family protein identified by match to PFAM protein family HMM PF00857 gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1674 SAG1675 SAG1675 SAG1675 1670787 1671572 - transcriptional repressor CodY CodY%3B DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1675 SAG1676 SAG1676 SAG1676 1671698 1672909 - aminotransferase broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1676 SAG1677 SAG1677 SAG1677 1673176 1673628 + hypothetical protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1677 SAG1678 SAG1678 SAG1678 1673684 1675066 - HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1678 SAG1679 SAG1679 SAG1679 1675135 1676097 + asparaginase identified by match to PFAM protein family HMM PF00710 gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1679 SAG1680 SAG1680 aroE aroE 1676132 1677010 - shikimate 5-dehydrogenase identified by match to PFAM protein family HMM PF01488 gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1680 SAG1681 SAG1681 SAG1681 1677108 1678022 - aldo/keto reductase identified by match to PFAM protein family HMM PF00248 gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1681 SAG1682 SAG1682 recG recG 1678313 1680328 - ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1682 SAG1683 SAG1683 SAG1683 1680408 1681946 - hypothetical protein similar to GP:1399011%3B identified by sequence similarity gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1683 SAG1684 SAG1684 alr alr 1682039 1683139 - alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1684 SAG1685 SAG1685 acpS acpS 1683136 1683495 - 4'-phosphopantetheinyl transferase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1685 SAG1686 SAG1686 SAG1686 1683520 1684527 - phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1686 SAG1687 SAG1687 secA secA 1684653 1687181 - preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1687 SAG1688 SAG1688 manA manA 1687290 1688237 - mannose-6-phosphate isomerase identified by match to PFAM protein family HMM PF01238 gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1688 SAG1689 SAG1689 scrK scrK 1688355 1689236 - fructokinase identified by match to PFAM protein family HMM PF00480 gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1689 SAG1690 SAG1690 SAG1690 1689304 1691223 - PTS system transporter subunit IIABC identified by match to PFAM protein family HMM PF00358 gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1690 SAG1691 SAG1691 scrB scrB 1691408 1692847 + sucrose-6-phosphate hydrolase identified by match to PFAM protein family HMM PF00251 gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1691 SAG1692 SAG1692 scrR scrR 1692849 1693811 + sucrose operon repressor ScrR identified by match to PFAM protein family HMM PF00356 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1692 SAG1693 SAG1693 nusB nusB 1693898 1694332 - transcription antitermination protein NusB Regulates rRNA biosynthesis by transcriptional antitermination gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1693 SAG1694 SAG1694 SAG1694 1694325 1694714 - hypothetical protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1694 SAG1695 SAG1695 efp efp 1694803 1695363 - elongation factor P Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1695 SAG1696 SAG1696 SAG1696 1695394 1695510 - hypothetical protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1696 SAG1697 SAG1697 SAG1697 1696092 1696238 - hypothetical protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1697 SAG1698 SAG1698 SAG1698 1696291 1696590 - hypothetical protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1698 SAG1699 SAG1699 SAG1699 1696643 1696735 - hypothetical protein gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1699 SAG1700 SAG1700 SAG1700 1697008 1697238 - hypothetical protein gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1700 SAG1701 SAG1701 SAG1701 1697251 1697421 - hypothetical protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1701 SAG1702 SAG1702 SAG1702 1697874 1697999 - hypothetical protein gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1702 SAG1703 SAG1703 SAG1703 1698010 1698174 - hypothetical protein gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1703 SAG1704 SAG1704 SAG1704 1698476 1698928 - cytidine/deoxycytidylate deaminase family protein identified by match to PFAM protein family HMM PF00383 gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1704 SAG1705 SAG1705 SAG1705 1698940 1700007 - This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP0187%3B identified by sequence similarity%3B peptidase%2C M24 family%2C authentic point mutation gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1705 SAG1706 SAG1706 SAG1706 1700107 1700823 - hypothetical protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1706 SAG1707 SAG1707 SAG1707 1700825 1702324 - EmrB/QacA family drug resistance transporter identified by match to PFAM protein family HMM PF00083 gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1707 SAG1708 SAG1708 SAG1708 1702412 1702528 - hypothetical protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1708 SAG1709 SAG1709 uvrA uvrA 1702660 1705488 - excinuclease ABC subunit A The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1709 SAG1710 SAG1710 SAG1710 1705620 1706291 - hypothetical protein gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1710 SAG1711 SAG1711 SAG1711 1706316 1707260 - magnesium transporter CorA family protein identified by match to PFAM protein family HMM PF01544 gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1711 SAG1712 SAG1712 rpsR rpsR 1707430 1707669 - 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1712 SAG1713 SAG1713 ssb-3 ssb-3 1707714 1708205 - single-stranded DNA-binding protein binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1713 SAG1714 SAG1714 rpsF rpsF 1708217 1708504 - 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1714 SAG1715 SAG1715 mutY mutY 1709598 1710722 + A/G-specific adenine glycosylase identified by match to PFAM protein family HMM PF00730 gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1715 SAG1716 SAG1716 SAG1716 1710899 1711492 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1716 SAG1717 SAG1717 trx trx 1711538 1711852 - thioredoxin identified by match to PFAM protein family HMM PF00085 gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1717 SAG1718 SAG1718 SAG1718 1711933 1712433 - PAP2 family protein identified by match to PFAM protein family HMM PF01569 gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1718 SAG1719 SAG1719 SAG1719 1712437 1714776 - MutS2 family protein identified by match to PFAM protein family HMM PF00488%3B Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function. gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1719 SAG1720 SAG1720 SAG1720 1714861 1715403 - hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1720 SAG1721 SAG1721 SAG1721 1715406 1715717 - hypothetical protein gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1721 SAG1722 SAG1722 rnhC rnhC 1715828 1716721 + ribonuclease HIII An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1722 SAG1723 SAG1723 SAG1723 1716737 1717330 + signal peptidase I identified by match to PFAM protein family HMM PF00461 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1723 SAG1724 SAG1724 SAG1724 1717459 1719879 + helicase identified by match to TIGR protein family HMM TIGR01448 gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1724 SAG1725 SAG1725 SAG1725 1719993 1720475 + hypothetical protein gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1725 SAG1726 SAG1726 dinP dinP 1720546 1721640 - DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1726 SAG1727 SAG1727 pflD-2 pflD-2 1721825 1724137 + formate acetyltransferase identified by match to PFAM protein family HMM PF01228 gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1727 SAG1728 SAG1728 SAG1728 1724238 1724612 + FMN-binding protein similar to SP:Q46604%3B identified by sequence similarity gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1728 SAG1729 SAG1729 SAG1729 1724647 1725576 - hypothetical protein gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1729 SAG1730 SAG1730 SAG1730 1725573 1726328 - hypothetical protein gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1730 SAG1731 SAG1731 SAG1731 1726453 1727349 + hypothetical protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1731 SAG1732 SAG1732 SAG1732 1727428 1728276 - glycerol uptake facilitator protein identified by match to PFAM protein family HMM PF00230 gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1732 SAG1733 SAG1733 SAG1733 1728444 1728896 - universal stress protein identified by match to PFAM protein family HMM PF00582 gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1733 SAG1734 SAG1734 SAG1734 1728914 1730116 - transporter identified by match to PFAM protein family HMM PF00083 gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1734 SAG1735 SAG1735 SAG1735 1730273 1730932 + Crp/Fnr family transcriptional regulator gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1735 SAG1736 SAG1736 pepX pepX 1730956 1733241 + x-prolyl-dipeptidyl aminopeptidase catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1736 SAG1737 SAG1737 SAG1737 1733245 1733604 + hypothetical protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1737 SAG1738 SAG1738 SAG1738 1733650 1734630 + polyprenyl synthetase identified by match to PFAM protein family HMM PF00348 gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1738 SAG1739 SAG1739 cydC cydC 1734715 1736463 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1739 SAG1740 SAG1740 SAG1740 1736456 1738174 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1740 SAG1741 SAG1741 cydB cydB 1738174 1739193 - cytochrome d ubiquinol oxidase%2C subunit II identified by match to PFAM protein family HMM PF02322 gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1741 SAG1742 SAG1742 cydA cydA 1739194 1740621 - cytochrome d oxidase subunit I identified by match to PFAM protein family HMM PF01654 gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1742 SAG1743 SAG1743 SAG1743 1740724 1741932 - pyridine nucleotide-disulfide oxidoreductase family protein identified by match to PFAM protein family HMM PF00070 gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1743 SAG1744 SAG1744 SAG1744 1741945 1742844 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1744 SAG1745 SAG1745 SAG1745 1743253 1743699 - hypothetical protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1745 SAG1746 SAG1746 SAG1746 1744352 1744459 - hypothetical protein gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1746 SAG1747 SAG1747 SAG1747 1744582 1744881 + hypothetical protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1747 SAG1748 SAG1748 cfa cfa 1745041 1746231 + cyclopropane-fatty-acyl-phospholipid synthase identified by match to PFAM protein family HMM PF02353 gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1748 SAG1749 SAG1749 SAG1749 1746301 1747026 - MerR family transcriptional regulator identified by match to PFAM protein family HMM PF00376 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1749 SAG1750 SAG1750 SAG1750 1747153 1747740 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1750 SAG1751 SAG1751 SAG1751 1747784 1748320 - hypothetical protein gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1751 SAG1752 SAG1752 SAG1752 1748455 1749627 + hypothetical protein gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1752 SAG1753 SAG1753 SAG1753 1749671 1750453 - hypothetical protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1753 SAG1754 SAG1754 rpsN rpsN 1750612 1750881 + 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1754 SAG1755 SAG1755 SAG1755 1751089 1751205 + hypothetical protein gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1755 SAG1756 SAG1756 SAG1756 1751242 1752267 - hypothetical protein gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1756 SAG1757 SAG1757 gcp gcp 1752387 1753397 - DNA-binding/iron metalloprotein/AP endonuclease in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1757 SAG1758 SAG1758 SAG1758 1753473 1753880 - ribosomal-protein-alanine acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1758 SAG1759 SAG1759 SAG1759 1753882 1754574 - hypothetical protein The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1759 SAG1760 SAG1760 SAG1760 1754753 1754983 + hypothetical protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1760 SAG1761 SAG1761 SAG1761 1755037 1756716 + metallo-beta-lactamase superfamily protein identified by match to PFAM protein family HMM PF00753 gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1761 SAG1762 SAG1762 SAG1762 1756874 1757383 - hypothetical protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1762 SAG1763 SAG1763 glnA glnA 1757531 1758877 - glutamine synthetase%2C type I identified by match to PFAM protein family HMM PF00120 gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1763 SAG1764 SAG1764 glnR glnR 1758911 1759282 - GlnR family transcriptional regulator identified by match to PFAM protein family HMM PF00376 gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1764 SAG1765 SAG1765 SAG1765 1759362 1759901 - hypothetical protein gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1765 SAG1766 SAG1766 pgk pgk 1760164 1761360 - phosphoglycerate kinase Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1766 SAG1767 SAG1767 SAG1767 1761495 1762364 - acid phosphatase similar to GP:1944618%3B identified by sequence similarity gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1767 SAG1768 SAG1768 gap gap 1762573 1763583 - glyceraldehyde-3-phosphate dehydrogenase catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1768 SAG1769 SAG1769 fusA fusA 1763787 1765865 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1769 SAG1770 SAG1770 rpsG rpsG 1766020 1766490 - 30S ribosomal protein S7 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1770 SAG1771 SAG1771 rpsL rpsL 1766512 1766925 - 30S ribosomal protein S12 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1771 SAG1772 SAG1772 purR purR 1767144 1767956 - pur operon repressor identified by match to PFAM protein family HMM PF00156 gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1772 SAG1773 SAG1773 SAG1773 1768053 1768994 - HD domain-containing protein identified by match to PFAM protein family HMM PF01966 gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1773 SAG1774 SAG1774 SAG1774 1768984 1770258 - hypothetical protein gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1774 SAG1775 SAG1775 SAG1775 1770260 1770892 - hypothetical protein gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1775 SAG1776 SAG1776 rpe rpe 1770885 1771547 - ribulose-phosphate 3-epimerase catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1776 SAG1777 SAG1777 SAG1777 1771554 1772426 - ribosome-associated GTPase EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1777 SAG1778 SAG1778 SAG1778 1772582 1773433 - rRNA (guanine-N1-)-methyltransferase similar to GB:D28496 SP:P36999 PID:460699 GB:U00096 PID:1736466%3B identified by sequence similarity gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1778 SAG1779 SAG1779 ksgA ksgA 1773437 1774309 - dimethyladenosine transferase catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1779 SAG1780 SAG1780 SAG1780 1774389 1774880 - hypothetical protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1780 SAG1781 SAG1781 SAG1781 1774899 1775459 - primase-like protein identified by match to PFAM protein family HMM PF01751 gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1781 SAG1782 SAG1782 SAG1782 1775446 1776228 - TatD family deoxyribonuclease identified by match to PFAM protein family HMM PF01026 gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1782 SAG1783 SAG1783 SAG1783 1776410 1776682 - hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1783 SAG1784 SAG1784 SAG1784 1776701 1777093 - hypothetical protein gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1784 SAG1785 SAG1785 SAG1785 1777084 1778376 - hypothetical protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1785 SAG1786 SAG1786 SAG1786 1778376 1778768 - hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1786 SAG1787 SAG1787 dltD dltD 1778943 1780205 - dltD protein similar to OMNI:SP2173%3B identified by sequence similarity gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1787 SAG1788 SAG1788 dltC dltC 1780198 1780437 - D-alanine--poly(phosphoribitol) ligase subunit 2 D-alanyl carrier protein subunit%3B involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid%3B D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1788 SAG1789 SAG1789 dltB dltB 1780452 1781717 - dltB protein similar to OMNI:SP2175%3B identified by sequence similarity gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1789 SAG1790 SAG1790 dltA dltA 1781714 1783249 - D-alanine--poly(phosphoribitol) ligase subunit 1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1790 SAG1791 SAG1791 SAG1791 1783395 1784582 - sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1791 SAG1792 SAG1792 SAG1792 1784582 1785256 - DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1792 SAG1793 SAG1793 rpmH rpmH 1785612 1785746 - 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1793 SAG1794 SAG1794 SAG1794 1785930 1787285 - hypothetical protein similar to OMNI:NTL01BH3953%3B identified by sequence similarity gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1794 SAG1795 SAG1795 SAG1795 1787517 1788683 + IS30 family transposase identified by match to PFAM protein family HMM PF00665 gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1795 SAG1796 SAG1796 SAG1796 1789082 1790809 - amino acid ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1796 SAG1797 SAG1797 SAG1797 1790828 1792051 - amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1797 SAG1798 SAG1798 SAG1798 1792194 1792313 + hypothetical protein gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1798 SAG1799 SAG1799 xfp xfp 1792428 1794806 - phosphoketolase similar to SP:Q9AEM9%3B identified by sequence similarity gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1799 SAG1800 SAG1800 SAG1800 1794896 1795987 - L-ascorbate 6-phosphate lactonase gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1800 SAG1801 SAG1801 SAG1801 1796304 1797983 - BglG family transcriptional antiterminator identified by match to PFAM protein family HMM PF00874 gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1801 SAG1802 SAG1802 SAG1802 1798049 1798810 - hypothetical protein gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1802 SAG1803 SAG1803 SAG1803 1798830 1800347 - carbohydrate kinase identified by match to PFAM protein family HMM PF00370 gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1803 SAG1804 SAG1804 SAG1804 1800413 1801402 - hypothetical protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1804 SAG1805 SAG1805 SAG1805 1801424 1802875 - PTS system transporter subunit IIC gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1805 SAG1806 SAG1806 SAG1806 1802973 1803929 - glyoxylate reductase%2C NADH-dependent identified by match to PFAM protein family HMM PF00389 gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1806 SAG1807 SAG1807 SAG1807 1803948 1804967 - hypothetical protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1807 SAG1808 SAG1808 SAG1808 1805202 1806185 - LacI family sugar-binding transcriptional regulator identified by match to PFAM protein family HMM PF00356 gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1808 SAG1809 SAG1809 SAG1809 1806349 1806996 - translaldolase similar to novel fructose-6-phosphate aldolase from Escherichia coli%3B enzyme from Methanocaldococcus janaschii shows transaldolase activity gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1809 SAG1810 SAG1810 araD araD 1807007 1807723 - L-ribulose-5-phosphate 4-epimerase catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate in the L-arabinose and L-ascorbate degradation pathways gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1810 SAG1811 SAG1811 SAG1811 1807725 1808588 - L-xylulose 5-phosphate 3-epimerase L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1811 SAG1812 SAG1812 ulaD ulaD 1808592 1809257 - 3-keto-L-gulonate-6-phosphate decarboxylase catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1812 SAG1813 SAG1813 SAG1813 1809370 1809855 - PTS system transporter subunit IIA identified by match to PFAM protein family HMM PF00359 gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1813 SAG1814 SAG1814 SAG1814 1809922 1810200 - PTS system transporter subunit IIB similar to OMNI:SP2037%3B identified by sequence similarity gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1814 SAG1815 SAG1815 ulaA ulaA 1810228 1811667 - PTS system ascorbate-specific transporter subunit IIC membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1815 SAG1816 SAG1816 SAG1816 1811835 1812452 - hypothetical protein gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1816 SAG1817 SAG1817 SAG1817 1812611 1813084 + hypothetical protein gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1817 SAG1818 SAG1818 purA purA 1813107 1814399 - adenylosuccinate synthetase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1818 SAG1819 SAG1819 pfoR pfoR 1814769 1815791 - perfringolysin O regulator protein identified by sequence similarity gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1819 SAG1820 SAG1820 SAG1820 1816153 1816827 + hypothetical protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1820 SAG1821 SAG1821 SAG1821 1816997 1819249 + bifunctional glutamate--cysteine ligase/glutathione synthetase Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1821 SAG1822 SAG1822 SAG1822 1819373 1820191 + hypothetical protein similar to OMNI:NTL01SPL0121%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1822 SAG1823 SAG1823 SAG1823 1820188 1821444 + hypothetical protein similar to OMNI:NTL01SPL0120%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1823 SAG1824 SAG1824 hslO hslO 1821584 1822459 + heat shock protein 33 becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1824 SAG1825 SAG1825 SAG1825 1822443 1823420 + NifR3/Smm1 family protein identified by match to PFAM protein family HMM PF01207 gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1825 SAG1826 SAG1826 SAG1826 1823541 1824182 + deoxynucleoside kinase family protein identified by match to PFAM protein family HMM PF01712 gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1826 SAG1827 SAG1827 pat pat 1824196 1824687 + phosphinothricin N-acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1827 SAG1828 SAG1828 SAG1828 1824907 1827354 - ATP-dependent Clp protease%2C ATP-binding subunit identified by match to PFAM protein family HMM PF00004 gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1828 SAG1829 SAG1829 ctsR ctsR 1827351 1827815 - CtsR family transcriptional regulator similar to GB:D26185 SP:P37568 PID:467471 GB:AL009126%3B identified by sequence similarity gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1829 SAG1830 SAG1830 SAG1830 1827988 1828449 + hypothetical protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1830 SAG1831 SAG1831 tsf tsf 1828608 1829648 - elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1831 SAG1832 SAG1832 rpsB rpsB 1829742 1830512 - 30S ribosomal protein S2 one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1832 SAG1833 SAG1833 ahpC ahpC 1830789 1831349 + alkyl hydroperoxide reductase identified by match to PFAM protein family HMM PF00578 gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1833 SAG1834 SAG1834 ahpF ahpF 1831367 1832899 + alkyl hydroperoxide reductase identified by match to PFAM protein family HMM PF00070 gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1834 SAG1835 SAG1835 SAG1835 1833318 1833722 - hypothetical protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1835 SAG1836 SAG1836 SAG1836 1833783 1833968 - hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1836 SAG1837 SAG1837 SAG1837 1834175 1835581 - prophage LambdaSa2%2C lysin identified by match to PFAM protein family HMM PF01832 gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1837 SAG1838 SAG1838 SAG1838 1835585 1835914 - prophage LambdaSa2%2C holin similar to GP:13655626%3B identified by sequence similarity gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1838 SAG1839 SAG1839 SAG1839 1835917 1836327 - hypothetical protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1839 SAG1840 SAG1840 SAG1840 1836362 1836700 - hypothetical protein gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1840 SAG1841 SAG1841 SAG1841 1836703 1836933 - hypothetical protein similar to PID:1514671%3B identified by sequence similarity gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1841 SAG1842 SAG1842 SAG1842 1836950 1840624 - prophage LambdaSa2%2C PblB similar to GP:10732859%3B identified by sequence similarity%3B PblB is a platelet adhesin. This version contains a 200aa insert that shows similarity (32%25 identity%2C 44%25 similarity over 95 residues) to SP|Q9TL08 a chloroplast enzyme which converts protoporphyrin IX (a hemoglobin precursor) into cholorophyll. gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1842 SAG1843 SAG1843 SAG1843 1840625 1841347 - hypothetical protein gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1843 SAG1844 SAG1844 SAG1844 1841344 1844079 - hypothetical protein gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1844 SAG1845 SAG1845 SAG1845 1844098 1844226 - hypothetical protein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1845 SAG1846 SAG1846 SAG1846 1844265 1844741 - hypothetical protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1846 SAG1847 SAG1847 SAG1847 1844741 1845424 - hypothetical protein gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1847 SAG1848 SAG1848 SAG1848 1845439 1845783 - hypothetical protein gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1848 SAG1849 SAG1849 SAG1849 1845770 1846117 - hypothetical protein gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1849 SAG1850 SAG1850 SAG1850 1846117 1846422 - hypothetical protein gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1850 SAG1851 SAG1851 SAG1851 1846419 1846754 - hypothetical protein similar to GB:AE001825%3B identified by sequence similarity gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1851 SAG1852 SAG1852 SAG1852 1846775 1848037 - hypothetical protein gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1852 SAG1853 SAG1853 SAG1853 1848048 1848590 - prophage LambdaSa2%2C protease similar to OMNI:CC2786%3B identified by sequence similarity gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1853 SAG1854 SAG1854 SAG1854 1848640 1849782 - hypothetical protein gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1854 SAG1855 SAG1855 SAG1855 1849791 1851503 - prophage LambdaSa2%2C terminase large subunit identified by match to PFAM protein family HMM PF03354 gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1855 SAG1856 SAG1856 SAG1856 1851496 1851981 - hypothetical protein gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1856 SAG1857 SAG1857 SAG1857 1852069 1852428 - prophage LambdaSa2%2C HNH endonuclease family protein identified by match to PFAM protein family HMM PF01844 gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1857 SAG1858 SAG1858 SAG1858 1852428 1852715 - hypothetical protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1858 SAG1859 SAG1859 SAG1859 1853005 1853547 - prophage LambdaSa2%2C site-specific recombinase phage integrase family protein identified by match to PFAM protein family HMM PF00589 gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1859 SAG1860 SAG1860 SAG1860 1853657 1854121 - hypothetical protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1860 SAG1861 SAG1861 SAG1861 1854118 1854477 - prophage LambdaSa2%2C Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1861 SAG1862 SAG1862 SAG1862 1854462 1854722 - hypothetical protein gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1862 SAG1863 SAG1863 ssb-4 ssb-4 1854732 1855148 - prophage LambdaSa2%2C single-strand binding protein identified by match to PFAM protein family HMM PF00436 gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1863 SAG1864 SAG1864 SAG1864 1855138 1855344 - hypothetical protein gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1864 SAG1865 SAG1865 SAG1865 1855341 1855565 - hypothetical protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1865 SAG1866 SAG1866 SAG1866 1855697 1856026 - hypothetical protein gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1866 SAG1867 SAG1867 SAG1867 1856026 1856517 - hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1867 SAG1868 SAG1868 SAG1868 1856510 1856914 - hypothetical protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1868 SAG1869 SAG1869 SAG1869 1856911 1858224 - prophage LambdaSa2%2C type II DNA modification methyltransferase identified by match to PFAM protein family HMM PF00145%3B Possibly an isoschizomer of Spn5252IP. gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1869 SAG1870 SAG1870 SAG1870 1858224 1859045 - prophage LambdaSa2%2C DNA replication protein DnaC gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1870 SAG1871 SAG1871 SAG1871 1859046 1859792 - This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.%3B prophage LambdaSa2%2C bacteriophage replication protein/hypothetical protein%2C truncation/fusion gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1871 SAG1872 SAG1872 SAG1872 1859770 1860372 - hypothetical protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1872 SAG1873 SAG1873 dnaC-1 dnaC-1 1860374 1861705 - prophage LambdaSa2%2C replicative DNA helicase identified by match to PFAM protein family HMM PF00772%3B In low GC Gram-postive bacteria this is known as dnaC. In other prokaryotes%2C functional equivalent known as dnaB. gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1873 SAG1874 SAG1874 SAG1874 1861714 1861977 - hypothetical protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1874 SAG1875 SAG1875 SAG1875 1861956 1862240 - hypothetical protein gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1875 SAG1876 SAG1876 SAG1876 1862240 1862770 - prophage LambdaSa2%2C HNH endonuclease family protein identified by match to PFAM protein family HMM PF01844 gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1876 SAG1877 SAG1877 SAG1877 1862833 1863543 - prophage LambdaSa2%2C antirepressor protein identified by match to PFAM protein family HMM PF02498 gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1877 SAG1878 SAG1878 SAG1878 1863546 1863854 - hypothetical protein similar to GP:3676450%3B identified by sequence similarity gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1878 SAG1879 SAG1879 SAG1879 1863816 1864286 + hypothetical protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1879 SAG1880 SAG1880 SAG1880 1864269 1864433 - hypothetical protein gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1880 SAG1881 SAG1881 SAG1881 1864415 1864570 - hypothetical protein gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1881 SAG1882 SAG1882 SAG1882 1864719 1865081 + prophage LambdaSa2%2C repressor protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1882 SAG1883 SAG1883 SAG1883 1865082 1865468 + hypothetical protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1883 SAG1884 SAG1884 SAG1884 1865521 1865925 + hypothetical protein gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1884 SAG1885 SAG1885 SAG1885 1866047 1867117 + prophage LambdaSa2%2C site-specific recombinase phage integrase family protein identified by match to PFAM protein family HMM PF00589 gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1885 SAG1886 SAG1886 SAG1886 1867119 1867217 + hypothetical protein gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1886 SAG1887 SAG1887 SAG1887 1867260 1869329 - Na+/H+ exchanger family protein identified by match to PFAM protein family HMM PF00999 gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1887 SAG1888 SAG1888 SAG1888 1869331 1869567 - hypothetical protein gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1888 SAG1889 SAG1889 SAG1889 1869734 1870687 + microcin immunity protein MccF identified by match to PFAM protein family HMM PF02016 gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1889 SAG1890 SAG1890 pepO pepO 1870737 1872632 - endopeptidase O identified by match to PFAM protein family HMM PF01431 gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1890 SAG1891 SAG1891 SAG1891 1872780 1873763 + Gfo/Idh/MocA family oxidoreductase identified by match to PFAM protein family HMM PF01408 gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1891 SAG1892 SAG1892 SAG1892 1873809 1874885 - hypothetical protein gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1892 SAG1893 SAG1893 SAG1893 1874869 1875048 - hypothetical protein gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1893 SAG1894 SAG1894 SAG1894 1875084 1875728 + cyclic nucleotide-binding protein identified by match to PFAM protein family HMM PF00027 gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1894 SAG1895 SAG1895 def def 1875794 1876408 + peptide deformylase cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+) gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1895 SAG1896 SAG1896 regR regR 1876479 1877480 - RegR family transcriptional regulator identified by match to PFAM protein family HMM PF00532 gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1896 SAG1897 SAG1897 SAG1897 1877560 1879464 - hypothetical protein gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1897 SAG1898 SAG1898 SAG1898 1879544 1880359 - PTS system transporter subunit IID gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1898 SAG1899 SAG1899 SAG1899 1880346 1881212 - PTS system transporter subunit IIC gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1899 SAG1900 SAG1900 SAG1900 1881248 1881742 - PTS system transporter subunit IIB gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1900 SAG1901 SAG1901 SAG1901 1881797 1882993 - glucuronyl hydrolase similar to GP:5869507%3B identified by sequence similarity gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1901 SAG1902 SAG1902 SAG1902 1882996 1883430 - PTS system transporter subunit IIA gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1902 SAG1903 SAG1903 SAG1903 1883531 1883635 + hypothetical protein gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1903 SAG1904 SAG1904 SAG1904 1883708 1884520 + gluconate 5-dehydrogenase Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1904 SAG1905 SAG1905 SAG1905 1884537 1885175 + hypothetical protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1905 SAG1906 SAG1906 SAG1906 1885201 1886208 + carbohydrate kinase identified by match to PFAM protein family HMM PF00294 gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1906 SAG1907 SAG1907 eda-2 eda-2 1886220 1886858 + keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1907 SAG1908 SAG1908 SAG1908 1887919 1889418 + hypothetical protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1908 SAG1909 SAG1909 SAG1909 1889589 1890203 - nitroreductase family protein identified by match to PFAM protein family HMM PF00881 gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1909 SAG1910 SAG1910 SAG1910 1890336 1890761 - MarR family transcriptional regulator identified by match to PFAM protein family HMM PF01047 gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1910 SAG1911 SAG1911 polC polC 1890888 1895294 - DNA polymerase III PolC catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B required for leading strand synthesis%3B PolC exhibits 3' to 5' exonuclease activity gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1911 SAG1912 SAG1912 SAG1912 1895417 1896001 - N-acetylmuramoyl-L-alanine amidase identified by match to PFAM protein family HMM PF01832 gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1912 SAG1913 SAG1913 proS proS 1896126 1897979 - prolyl-tRNA synthetase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1913 SAG1914 SAG1914 SAG1914 1898071 1899330 - zinc metalloprotease identified by match to TIGR protein family HMM TIGR00054 gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1914 SAG1915 SAG1915 cdsA cdsA 1899361 1900155 - phosphatidate cytidylyltransferase identified by match to PFAM protein family HMM PF01148 gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1915 SAG1916 SAG1916 uppS uppS 1900170 1900922 - undecaprenyl pyrophosphate synthase catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1916 SAG1917 SAG1917 yajC yajC 1901089 1901430 - preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1917 SAG1918 SAG1918 SAG1918 1901507 1901851 - hypothetical protein The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1918 SAG1919 SAG1919 SAG1919 1902042 1903205 - malate oxidoreductase identified by match to PFAM protein family HMM PF00390 gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1919 SAG1920 SAG1920 SAG1920 1903230 1904567 - CCS family citrate carrier protein identified by match to PFAM protein family HMM PF03390 gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1920 SAG1921 SAG1921 SAG1921 1904721 1906247 + sensor histidine kinase similar to OMNI:NTL01SPL0863%3B identified by sequence similarity gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1921 SAG1922 SAG1922 SAG1922 1906249 1906938 + response regulator identified by match to PFAM protein family HMM PF00072 gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1922 SAG1923 SAG1923 galE galE 1906951 1907946 - UDP-glucose 4-epimerase identified by match to PFAM protein family HMM PF01370 gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1923 SAG1924 SAG1924 dexB dexB 1908034 1909641 - glucan 1%2C6-alpha-glucosidase identified by match to PFAM protein family HMM PF00128 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1924 SAG1925 SAG1925 SAG1925 1909769 1910902 - sugar ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1925 SAG1926 SAG1926 SAG1926 1911003 1911854 - helix-turn-helix domain-containing protein identified by match to TIGR protein family HMM TIGR01199 gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1926 SAG1927 SAG1927 SAG1927 1911949 1912845 - aldolase 1 epimerase LacX identified by match to PFAM protein family HMM PF02693 gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1927 SAG1928 SAG1928 lacD lacD 1912899 1913876 - tagatose 1%2C6-diphosphate aldolase catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase%2C encoded by lacD1 and lacD2%3B expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1928 SAG1929 SAG1929 lacC lacC 1913878 1914810 - tagatose-6-phosphate kinase catalyzes the formation of tagatose 1%2C6-bisphosphate from tagatose 6-phosphate and ATP gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1929 SAG1930 SAG1930 lacB lacB 1914821 1915336 - galactose-6-phosphate isomerase subunit LacB catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1930 SAG1931 SAG1931 lacA lacA 1915357 1915782 - galactose-6-phosphate isomerase subunit LacA catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate%3B tagatose pathway for galactose utilization gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1931 SAG1932 SAG1932 SAG1932 1916030 1918480 - neuraminidase-like protein identified by match to PFAM protein family HMM PF02012 gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1932 SAG1933 SAG1933 SAG1933 1918719 1920167 - PTS system transporter subunit IIC gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1933 SAG1934 SAG1934 SAG1934 1920207 1920512 - PTS system transporter subunit IIB similar to OMNI:NTL01SPL1345%3B identified by sequence similarity gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1934 SAG1935 SAG1935 SAG1935 1920514 1920987 - PTS system transporter subunit IIA gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1935 SAG1936 SAG1936 lacR-2 lacR-2 1921197 1921973 + lactose phosphotransferase system repressor identified by match to PFAM protein family HMM PF00455 gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1936 SAG1937 SAG1937 SAG1937 1922255 1924784 - This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:12744742%3B identified by sequence similarity%3B streptococcal histidine triad family protein%2C degenerate gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1937 SAG1938 SAG1938 SAG1938 1924811 1925734 - adhesion lipoprotein identified by match to PFAM protein family HMM PF01297%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1938 SAG1939 SAG1939 SAG1939 1925989 1926432 - D-tyrosyl-tRNA(Tyr) deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1939 SAG1940 SAG1940 SAG1940 1926442 1928658 - GTP pyrophosphokinase identified by match to PFAM protein family HMM PF01842 gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1940 SAG1941 SAG1941 cpdB cpdB 1928918 1931320 + bifunctional 2'%2C3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein in Escherichia coli this is a periplasmic enzyme while in gram positive organisms it may be anchored at the cell surface%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1941 SAG1942 SAG1942 nrdI-2 nrdI-2 1931477 1931932 + flavoprotein NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1942 SAG1943 SAG1943 SAG1943 1931943 1932980 + hypothetical protein gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1943 SAG1944 SAG1944 SAG1944 1932980 1933477 + hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1944 SAG1945 SAG1945 SAG1945 1933699 1934736 - iron ABC transporter substrate-binding protein identified by match to PFAM protein family HMM PF01547 gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1945 SAG1946 SAG1946 SAG1946 1934748 1935521 - DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1946 SAG1947 SAG1947 SAG1947 1935525 1937174 - hypothetical protein gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1947 SAG1948 SAG1948 SAG1948 1937312 1938139 - PTS system transporter subunit IID gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1948 SAG1949 SAG1949 SAG1949 1938136 1938945 - PTS system transporter subunit IIC gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1949 SAG1950 SAG1950 SAG1950 1938961 1939452 - PTS system transporter subunit IIB gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1950 SAG1951 SAG1951 SAG1951 1939470 1939895 - PTS system transporter subunit IIA gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1951 SAG1952 SAG1952 SAG1952 1940142 1941203 - hypothetical protein similar to GP:7960293%3B identified by sequence similarity gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1952 SAG1953 SAG1953 SAG1953 1941228 1941410 + hypothetical protein gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1953 SAG1954 SAG1954 SAG1954 1941405 1942559 - hypothetical protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1954 SAG1955 SAG1955 SAG1955 1942565 1943413 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1955 SAG1956 SAG1956 SAG1956 1943536 1943826 - This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1956 SAG1957 SAG1957 SAG1957 1943904 1944656 - response regulator identified by match to PFAM protein family HMM PF00072 gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1957 SAG1958 SAG1958 SAG1958 1944933 1945763 - hypothetical protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1958 SAG1959 SAG1959 SAG1959 1945802 1947985 - PTS system transporter subunit IIABC identified by match to PFAM protein family HMM PF00358 gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1959 SAG1960 SAG1960 SAG1960 1948143 1949798 - sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1960 SAG1961 SAG1961 phoB phoB 1949791 1950468 - phosphate regulon response regulator PhoB identified by match to PFAM protein family HMM PF00072 gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1961 SAG1962 SAG1962 SAG1962 1950468 1951124 - phosphate transport system regulatory protein PhoU identified by match to PFAM protein family HMM PF01895 gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1962 SAG1963 SAG1963 SAG1963 1951121 1951882 - phosphate transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1963 SAG1964 SAG1964 SAG1964 1951863 1952741 - phosphate ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1964 SAG1965 SAG1965 SAG1965 1952743 1953588 - phosphate ABC transporter permease identified by match to PFAM protein family HMM PF00528 gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1965 SAG1966 SAG1966 SAG1966 1953603 1954484 - hemolysin gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1966 SAG1967 SAG1967 SAG1967 1954685 1955272 - hypothetical protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1967 SAG1968 SAG1968 SAG1968 1955269 1956009 - 16S ribosomal RNA methyltransferase RsmE in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1968 SAG1969 SAG1969 prmA prmA 1956009 1956962 - 50S ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1969 SAG1970 SAG1970 SAG1970 1956959 1957267 - hypothetical protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1970 SAG1971 SAG1971 SAG1971 1957329 1957454 + hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1971 SAG1972 SAG1972 SAG1972 1957541 1958257 + MerR family transcriptional regulator identified by match to PFAM protein family HMM PF00376 gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1972 SAG1973 SAG1973 SAG1973 1958296 1958766 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1973 SAG1974 SAG1974 SAG1974 1958738 1959196 - MutT/nudix family protein identified by match to PFAM protein family HMM PF00293 gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1974 SAG1975 SAG1975 SAG1975 1959183 1959326 - hypothetical protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1975 SAG1976 SAG1976 SAG1976 1959332 1959802 - hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1976 SAG1977 SAG1977 SAG1977 1960129 1960620 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1977 SAG1978 SAG1978 SAG1978 1960613 1961881 + recombination factor protein RarA identified by match to PFAM protein family HMM PF00004 gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1978 SAG1979 SAG1979 SAG1979 1962397 1963158 - hypothetical protein gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1979 SAG1980 SAG1980 SAG1980 1963155 1964057 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1980 SAG1981 SAG1981 SAG1981 1964054 1964260 - hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1981 SAG1982 SAG1982 SAG1982 1964250 1965329 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1982 SAG1983 SAG1983 SAG1983 1965710 1966027 + hypothetical protein gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1983 SAG1984 SAG1984 SAG1984 1966024 1966590 + hypothetical protein gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1984 SAG1985 SAG1985 SAG1985 1966644 1966799 - hypothetical protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1985 SAG1986 SAG1986 SAG1986 1966825 1967952 - phage integrase family site specific recombinase identified by match to PFAM protein family HMM PF00589 gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1986 SAG1987 SAG1987 SAG1987 1967956 1968141 - hypothetical protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1987 SAG1988 SAG1988 SAG1988 1968202 1969230 - hypothetical protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1988 SAG1989 SAG1989 SAG1989 1969233 1969652 - hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1989 SAG1990 SAG1990 SAG1990 1969978 1970361 - hypothetical protein gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1990 SAG1991 SAG1991 SAG1991 1970585 1971199 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1991 SAG1992 SAG1992 SAG1992 1971372 1972928 - hypothetical protein similar to PID:928833%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1992 SAG1993 SAG1993 SAG1993 1973269 1974390 - phage integrase family site specific recombinase identified by match to PFAM protein family HMM PF00589 gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1993 SAG1994 SAG1994 SAG1994 1974440 1974766 - hypothetical protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1994 SAG1995 SAG1995 SAG1995 1974959 1975591 - hypothetical protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1995 SAG1996 SAG1996 SAG1996 1975672 1976463 - cell wall surface anchor family protein gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1996 SAG1997 SAG1997 SAG1997 1976480 1977028 - hypothetical protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1997 SAG1998 SAG1998 SAG1998 1977028 1978401 - hypothetical protein gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1998 SAG1999 SAG1999 SAG1999 1978564 1978707 + hypothetical protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=SAG1999 SAG2000 SAG2000 SAG2000 1978897 1980897 - hypothetical protein similar to GP:6782407%3B identified by sequence similarity gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2000 SAG2001 SAG2001 SAG2001 1980913 1983183 - conjugal transfer protein%2C interruption-C This gene is interrupted by an IS1381 element. gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2001 SAG2002 SAG2002 SAG2002 1983230 1983619 - IS1381 transposase protein B identified by match to PFAM protein family HMM PF01609 gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2002 SAG2003 SAG2003 SAG2003 1983652 1984275 - IS1381 transposase protein A similar to OMNI:SP0537%3B identified by sequence similarity gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2003 SAG2004 SAG2004 SAG2004 1984071 1984275 - similar to GP:6782406%3B identified by sequence similarity%3B This gene is interrupted by an IS1381 element%3B conjugal transfer protein%2C interruption-N%2C degenerate gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2004 SAG2005 SAG2005 SAG2005 1984296 1984706 - hypothetical protein gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2005 SAG2006 SAG2006 SAG2006 1984717 1984983 - hypothetical protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2006 SAG2007 SAG2007 SAG2007 1985004 1985957 - hypothetical protein gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2007 SAG2008 SAG2008 SAG2008 1986010 1986264 - hypothetical protein gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2008 SAG2009 SAG2009 SAG2009 1986257 1986523 - hypothetical protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2009 SAG2010 SAG2010 SAG2010 1986668 1987141 - hypothetical protein gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2010 SAG2011 SAG2011 SAG2011 1987149 1987631 - hypothetical protein gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2011 SAG2012 SAG2012 SAG2012 1987684 1987956 - hypothetical protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2012 SAG2013 SAG2013 SAG2013 1988091 1988660 - hypothetical protein gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2013 SAG2014 SAG2014 SAG2014 1988663 1990012 - hypothetical protein gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2014 SAG2015 SAG2015 SAG2015 1990209 1990508 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2015 SAG2016 SAG2016 SAG2016 1990492 1990869 - hypothetical protein gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2016 SAG2017 SAG2017 SAG2017 1990885 1992174 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2017 SAG2018 SAG2018 SAG2018 1992405 1994066 - DNA translocase FtsK identified by match to PFAM protein family HMM PF01580 gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2018 SAG2019 SAG2019 SAG2019 1994143 1994604 - hypothetical protein gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2019 SAG2020 SAG2020 SAG2020 1994626 1994922 - hypothetical protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2020 SAG2021 SAG2021 SAG2021 1994982 1997462 - cell wall surface anchor family protein identified by match to PFAM protein family HMM PF00746 gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2021 SAG2022 SAG2022 SAG2022 1997467 1998720 - ISL3 family transposase identified by match to PFAM protein family HMM PF01610%3B This gene is located in a transposable element that also encodes two genes for a mercuric resistance operon%2C and there are two copies of the transposable element in this strain. gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2022 SAG2023 SAG2023 merA-2 merA-2 1998880 2000520 - mercuric reductase identified by match to PFAM protein family HMM PF00070 gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2023 SAG2024 SAG2024 merR-2 merR-2 2000549 2000941 - mercuric resistance operon regulatory protein MerR identified by match to PFAM protein family HMM PF00376 gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2024 SAG2025 SAG2025 SAG2025 2001647 2003215 + Mn2+/Fe2+ transporter identified by match to PFAM protein family HMM PF01566 gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2025 SAG2026 SAG2026 SAG2026 2003783 2004505 - hypothetical protein similar to OMNI:NTL01SA2412%3B identified by sequence similarity gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2026 SAG2027 SAG2027 SAG2027 2004509 2005126 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2027 SAG2028 SAG2028 SAG2028 2005184 2005294 - hypothetical protein gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2028 SAG2029 SAG2029 SAG2029 2005813 2006667 - streptomycin resistance protein similar to SP:P12055 GB:X06627 PID:46644%3B identified by sequence similarity gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2029 SAG2030 SAG2030 SAG2030 2006846 2007238 - hypothetical protein gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2030 SAG2031 SAG2031 SAG2031 2007673 2008281 - hypothetical protein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2031 SAG2032 SAG2032 SAG2032 2008268 2008603 - hypothetical protein gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2032 SAG2033 SAG2033 SAG2033 2009125 2009613 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2033 SAG2034 SAG2034 SAG2034 2009782 2010525 - hypothetical protein similar to OMNI:NTL01BH0292%3B identified by sequence similarity gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2034 SAG2035 SAG2035 SAG2035 2010540 2011442 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2035 SAG2036 SAG2036 SAG2036 2011439 2011645 - hypothetical protein gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2036 SAG2037 SAG2037 SAG2037 2011647 2012723 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2037 SAG2038 SAG2038 SAG2038 2012972 2013586 - PAP2 family protein identified by match to PFAM protein family HMM PF01569 gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2038 SAG2039 SAG2039 SAG2039 2013800 2014096 + hypothetical protein gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2039 SAG2040 SAG2040 SAG2040 2014113 2014673 + hypothetical protein gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2040 SAG2041 SAG2041 SAG2041 2014978 2015841 + protease identified by match to PFAM protein family HMM PF02517 gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2041 SAG2042 SAG2042 SAG2042 2015998 2016300 - rhodanese-like domain-containing protein identified by match to PFAM protein family HMM PF00581 gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2042 SAG2043 SAG2043 cfb cfb 2016473 2017240 - cAMP factor similar to SP:P09879%3B identified by sequence similarity gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2043 SAG2044 SAG2044 SAG2044 2017460 2017648 - hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2044 SAG2045 SAG2045 SAG2045 2018009 2018548 + topology modulation protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2045 SAG2046 SAG2046 SAG2046 2018749 2019834 + glycerol dehydrogenase identified by match to PFAM protein family HMM PF00465 gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2046 SAG2047 SAG2047 SAG2047 2019999 2020706 - hypothetical protein gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2047 SAG2048 SAG2048 SAG2048 2021053 2022897 - bifunctional homocysteine S-methyltransferase/5%2C10-methylenetetrahydrofolate reductase catalyzes the formation of 5%2C10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine%3B expressed in B. subtilis under methionine starvation conditions gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2048 SAG2049 SAG2049 metE metE 2022942 2025179 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2049 SAG2050 SAG2050 SAG2050 2025549 2025872 - hypothetical protein gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2050 SAG2051 SAG2051 SAG2051 2025862 2026554 - branched-chain amino acid transport protein AzlC gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2051 SAG2052 SAG2052 SAG2052 2026789 2026914 + hypothetical protein gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2052 SAG2053 SAG2053 SAG2053 2026877 2031589 + serine protease identified by match to PFAM protein family HMM PF00082 gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2053 SAG2054 SAG2054 SAG2054 2031822 2032508 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2054 SAG2055 SAG2055 SAG2055 2032505 2033893 + sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2055 SAG2056 SAG2056 SAG2056 2033986 2034594 + hypothetical protein similar to OMNI:EF0852%3B identified by sequence similarity gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2056 SAG2057 SAG2057 leuS leuS 2034681 2037182 - leucyl-tRNA synthetase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2057 SAG2058 SAG2058 SAG2058 2037559 2038806 + major facilitator family protein identified by match to PFAM protein family HMM PF00083 gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2058 SAG2059 SAG2059 SAG2059 2038849 2039694 - hypothetical protein identified by match to PFAM protein family HMM PF01734%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2059 SAG2060 SAG2060 SAG2060 2039899 2041095 + glycosyl transferase family protein identified by match to PFAM protein family HMM PF01501 gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2060 SAG2061 SAG2061 SAG2061 2041160 2042365 + glycosyl transferase family protein identified by match to PFAM protein family HMM PF01501 gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2061 SAG2062 SAG2062 nusG nusG 2042412 2042951 - transcription antitermination protein NusG Modulates Rho-dependent transcription termination gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2062 SAG2063 SAG2063 SAG2063 2043157 2045049 - pathogenicity protein identified by match to PFAM protein family HMM PF00746 gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2063 SAG2064 SAG2064 secE secE 2045361 2045534 - preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2064 SAG2065 SAG2065 rpmG rpmG 2045570 2045722 - 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group have the CXXC motif gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2065 SAG2066 SAG2066 pbp2A pbp2A 2045771 2048092 - penicillin-binding protein 2A identified by match to PFAM protein family HMM PF00905 gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2066 SAG2067 SAG2067 SAG2067 2048136 2049020 + ribosomal large subunit pseudouridine synthase D identified by match to PFAM protein family HMM PF00849 gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2067 SAG2068 SAG2068 SAG2068 2049045 2050685 - hypothetical protein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2068 SAG2069 SAG2069 deoB-2 deoB-2 2050855 2052066 - phosphopentomutase catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2069 SAG2070 SAG2070 deoC deoC 2052133 2052804 - deoxyribose-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2070 SAG2071 SAG2071 SAG2071 2052834 2054036 - Na+ dependent nucleoside transporter identified by match to PFAM protein family HMM PF01773 gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2071 SAG2072 SAG2072 udp udp 2054057 2054836 - uridine phosphorylase identified by match to PFAM protein family HMM PF01048 gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2072 SAG2073 SAG2073 SAG2073 2054994 2055731 + GntR family transcriptional regulator identified by match to PFAM protein family HMM PF00392 gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2073 SAG2074 SAG2074 groEL groEL 2056140 2057762 - molecular chaperone GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2074 SAG2075 SAG2075 groES groES 2057858 2058142 - co-chaperonin GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP-binding and hydrolysis in the trans ring gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2075 SAG2076 SAG2076 SAG2076 2058317 2059120 - ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2076 SAG2077 SAG2077 SAG2077 2059125 2060021 - ABC transporter permease identified by match to PFAM protein family HMM PF02653 gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2077 SAG2078 SAG2078 SAG2078 2060037 2060999 - hypothetical protein similar to OMNI:SP1069%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2078 SAG2079 SAG2079 SAG2079 2061464 2062261 - HAD superfamily hydrolase identified by match to PFAM protein family HMM PF00702 gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2079 SAG2080 SAG2080 SAG2080 2062447 2063307 + glyoxylase identified by match to PFAM protein family HMM PF00903 gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2080 SAG2081 SAG2081 SAG2081 2063350 2064081 + hypothetical protein gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2081 SAG2082 SAG2082 nrdG nrdG 2064438 2065055 - anaerobic ribonucleoside-triphosphate reductase activating protein identified by match to PFAM protein family HMM PF02143 gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2082 SAG2083 SAG2083 SAG2083 2065128 2065619 - acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2083 SAG2084 SAG2084 SAG2084 2065628 2066560 - virulence factor MviM identified by match to PFAM protein family HMM PF01408 gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2084 SAG2085 SAG2085 SAG2085 2066573 2066716 - hypothetical protein gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2085 SAG2086 SAG2086 nrdD nrdD 2066791 2068962 - anaerobic ribonucleoside triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2086 SAG2087 SAG2087 SAG2087 2069088 2070575 - hypothetical protein similar to OMNI:NTL01SPL1648%3B identified by sequence similarity gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2087 SAG2088 SAG2088 SAG2088 2070675 2070797 - hypothetical protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2088 SAG2089 SAG2089 SAG2089 2070879 2071196 - hypothetical protein gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2089 SAG2090 SAG2090 SAG2090 2071222 2071632 - Holliday junction resolvase-like protein similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2090 SAG2091 SAG2091 SAG2091 2071641 2071907 - hypothetical protein gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2091 SAG2092 SAG2092 spxA spxA 2072109 2072507 - Spx family transcriptional regulator the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters%3B in Bacillus subtilis this protein is a substrate for ClpXP protease%3B blocks transcription of the competence regulatory gene encoded by the srf operon%3B regulates a number of genes involved in thiol homeostasis including trxA and trxB%3B monomeric member of ArsC family of proteins%3B does not bind DNA%3B contains a disulfide bond between C10 and C13 which may sense disulfide stress gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2092 SAG2093 SAG2093 recA recA 2072723 2073862 - recombinase A catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2093 SAG2094 SAG2094 cinA cinA 2073936 2075196 - This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:SP1941%3B identified by sequence similarity%3B competence/damage-inducible protein CinA%2C authentic frameshift gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2094 SAG2095 SAG2095 tag tag 2075285 2075836 - DNA-3-methyladenine glycosylase I identified by match to PFAM protein family HMM PF03352 gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2095 SAG2096 SAG2096 ruvA ruvA 2075859 2076449 - Holliday junction DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2096 SAG2097 SAG2097 SAG2097 2076451 2077707 - transporter gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2097 SAG2098 SAG2098 mutL mutL 2077715 2079694 - DNA mismatch repair protein This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2098 SAG2099 SAG2099 SAG2099 2079819 2079920 - hypothetical protein gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2099 SAG2100 SAG2100 SAG2100 2079914 2080117 + CSD family cold shock protein identified by match to PFAM protein family HMM PF00313 gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2100 SAG2101 SAG2101 hexA hexA 2080174 2082750 - DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2101 SAG2102 SAG2102 SAG2102 2082807 2083244 - arginine repressor ArgR identified by match to PFAM protein family HMM PF01316 gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2102 SAG2103 SAG2103 argS argS 2083466 2085157 + arginyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2103 SAG2104 SAG2104 SAG2104 2085245 2085553 + hypothetical protein gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2104 SAG2105 SAG2105 SAG2105 2085580 2086452 - hypothetical protein gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2105 SAG2106 SAG2106 SAG2106 2086560 2087504 - hypothetical protein gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2106 SAG2107 SAG2107 aspS aspS 2087494 2089245 - aspartyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2107 SAG2108 SAG2108 hisS hisS 2089338 2090618 - histidyl-tRNA synthetase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2108 SAG2109 SAG2109 rpmF rpmF 2090838 2091020 + 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2109 SAG2110 SAG2110 rpmG rpmG 2091036 2091185 + 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2110 SAG2111 SAG2111 SAG2111 2091333 2091854 - hypothetical protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2111 SAG2112 SAG2112 SAG2112 2091952 2093436 - phage integrase family site specific recombinase identified by match to PFAM protein family HMM PF00589 gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2112 SAG2113 SAG2113 SAG2113 2093446 2093694 - hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2113 SAG2114 SAG2114 SAG2114 2093760 2094788 - hypothetical protein gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2114 SAG2115 SAG2115 SAG2115 2094791 2095222 - hypothetical protein gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2115 SAG2116 SAG2116 SAG2116 2095498 2095953 - hypothetical protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2116 SAG2117 SAG2117 SAG2117 2095953 2096168 - hypothetical protein gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2117 SAG2118 SAG2118 SAG2118 2096491 2097411 + Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2118 SAG2119 SAG2119 SAG2119 2097432 2098553 + hypothetical protein similar to GP:15161770%3B identified by sequence similarity gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2119 SAG2120 SAG2120 SAG2120 2098781 2099590 + hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2120 SAG2121 SAG2121 SAG2121 2100041 2100712 + hypothetical protein identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2121 SAG2122 SAG2122 SAG2122 2100797 2101468 + DNA-binding response regulator identified by match to PFAM protein family HMM PF00072 gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2122 SAG2123 SAG2123 SAG2123 2101452 2102816 + sensor histidine kinase identified by match to PFAM protein family HMM PF00512 gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2123 SAG2124 SAG2124 SAG2124 2102926 2104479 - hypothetical protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2124 SAG2125 SAG2125 arcC-1 arcC-1 2104573 2105499 - carbamate kinase catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2125 SAG2126 SAG2126 argF-1 argF-1 2105511 2106509 - ornithine carbamoyltransferase catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2126 SAG2127 SAG2127 SAG2127 2106612 2107907 + sensor histidine kinase identified by match to PFAM protein family HMM PF02518 gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2127 SAG2128 SAG2128 SAG2128 2107904 2108737 + response regulator identified by match to PFAM protein family HMM PF00072 gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2128 SAG2129 SAG2129 SAG2129 2108959 2109681 + amino acid ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2129 SAG2130 SAG2130 SAG2130 2109684 2111198 + amino acid ABC transporter amino acid-binding protein/permease identified by match to PFAM protein family HMM PF00528 gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2130 SAG2131 SAG2131 SAG2131 2111277 2113820 - hypothetical protein gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2131 SAG2132 SAG2132 SAG2132 2113801 2114544 - hypothetical protein gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2132 SAG2133 SAG2133 SAG2133 2114678 2115034 - hypothetical protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2133 SAG2134 SAG2134 SAG2134 2115101 2117419 - hypothetical protein similar to OMNI:NTL01SPL1699%3B identified by sequence similarity gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2134 SAG2135 SAG2135 SAG2135 2117558 2118097 + TetR family transcriptional regulator gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2135 SAG2136 SAG2136 SAG2136 2118183 2118479 - hypothetical protein gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2136 SAG2137 SAG2137 rpsD rpsD 2118723 2119334 - 30S ribosomal protein S4 primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2137 SAG2138 SAG2138 SAG2138 2119664 2119951 - hypothetical protein gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2138 SAG2139 SAG2139 dnaC-2 dnaC-2 2119963 2121318 - replicative DNA helicase unwinds double stranded DNA gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2139 SAG2140 SAG2140 rplI rplI 2121361 2121813 - 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2140 SAG2141 SAG2141 SAG2141 2121819 2123801 - DHH family protein identified by match to PFAM protein family HMM PF01368%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2141 SAG2142 SAG2142 gidA gidA 2123868 2125709 - tRNA uridine 5-carboxymethylaminomethyl modification protein GidA GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2142 SAG2143 SAG2143 SAG2143 2125938 2126549 - hypothetical protein identified by match to PFAM protein family HMM PF01914 gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2143 SAG2144 SAG2144 mnmA mnmA 2126581 2127702 - tRNA-specific 2-thiouridylase MnmA catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2144 SAG2145 SAG2145 sdhB sdhB 2127948 2128616 + L-serine dehydratase%2C iron-sulfur-dependent subunit beta identified by match to PFAM protein family HMM PF01842 gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2145 SAG2146 SAG2146 sdhA sdhA 2128631 2129503 + L-serine dehydratase%2C iron-sulfur-dependent subunit alpha identified by match to PFAM protein family HMM PF03313 gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2146 SAG2147 SAG2147 SAG2147 2129638 2130342 - hypothetical protein similar to OMNI:NTL01SPL1712%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2147 SAG2148 SAG2148 SAG2148 2130448 2130987 - LysM domain-containing protein identified by match to PFAM protein family HMM PF01476 gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2148 SAG2149 SAG2149 SAG2149 2131203 2131997 - cobalt transport family protein identified by match to PFAM protein family HMM PF02361 gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2149 SAG2150 SAG2150 cbiO cbiO 2131990 2132832 - cobalt transporter ATP-binding subunit with CbiNQ forms the ABC transporter for cobalt import%3B Streptococcus has two adjacent copies of this gene gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2150 SAG2151 SAG2151 cbiO cbiO 2132808 2133647 - cobalt transporter ATP-binding subunit with CbiNQ forms the ABC transporter for cobalt import%3B Streptococcus has two adjacent copies of this gene gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2151 SAG2152 SAG2152 pgsA pgsA 2133647 2134189 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase identified by match to PFAM protein family HMM PF01066 gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2152 SAG2153 SAG2153 SAG2153 2134312 2135595 - M16 family peptidase identified by match to PFAM protein family HMM PF00675 gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2153 SAG2154 SAG2154 SAG2154 2135597 2136841 - hypothetical protein gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2154 SAG2155 SAG2155 SAG2155 2137080 2137433 + hypothetical protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2155 SAG2156 SAG2156 recF recF 2137436 2138545 + recombination protein F Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2156 SAG2157 SAG2157 SAG2157 2138557 2139393 - transporter identified by match to PFAM protein family HMM PF00892 gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2157 SAG2158 SAG2158 SAG2158 2139479 2140141 - Cro/CI family transcriptional regulator identified by match to PFAM protein family HMM PF01381 gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2158 SAG2159 SAG2159 guaB guaB 2140216 2141697 - inosine 5'-monophosphate dehydrogenase catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2159 SAG2160 SAG2160 SAG2160 2141854 2142339 - ArgR family transcriptional regulator identified by match to PFAM protein family HMM PF02863 gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2160 SAG2161 SAG2161 SAG2161 2142349 2143029 - Crp/Fnr family transcriptional regulator identified by match to PFAM protein family HMM PF00027 gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2161 SAG2162 SAG2162 SAG2162 2143237 2143941 + hypothetical protein gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2162 SAG2163 SAG2163 arcA arcA 2144208 2145440 + arginine deiminase catalyzes the degradation of arginine to citruline and ammonia gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2163 SAG2164 SAG2164 SAG2164 2145467 2145877 + acetyltransferase identified by match to PFAM protein family HMM PF00583 gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2164 SAG2165 SAG2165 argF-2 argF-2 2145893 2146906 + ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2165 SAG2166 SAG2166 arcD arcD 2146969 2148396 + arginine/ornithine antiporter identified by match to PFAM protein family HMM PF00324 gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2166 SAG2167 SAG2167 arcC-2 arcC-2 2148417 2149373 + carbamate kinase catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2167 SAG2168 SAG2168 trpS trpS 2149483 2150508 - tryptophanyl-tRNA synthetase catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2168 SAG2169 SAG2169 SAG2169 2150616 2151308 - hypothetical protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2169 SAG2170 SAG2170 SAG2170 2151552 2152424 + hypothetical protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2170 SAG2171 SAG2171 SAG2171 2152490 2154109 + ABC transporter ATP-binding protein identified by match to PFAM protein family HMM PF00005 gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2171 SAG2172 SAG2172 SAG2172 2154232 2156811 + hypothetical protein similar to OMNI:NTL01SPL1730%3B identified by sequence similarity gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2172 SAG2173 SAG2173 SAG2173 2157390 2157869 - rRNA large subunit methyltransferase SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2173 SAG2174 SAG2174 SAG2174 2158070 2159299 + serine protease identified by match to PFAM protein family HMM PF00089 gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2174 SAG2175 SAG2175 SAG2175 2159397 2160170 + ParB family partitioning protein identified by match to PFAM protein family HMM PF02195 gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=SAG2175 SAG_RS02245 SAG_RS02245 SAG_RS02245 571859 572161 + hypothetical protein gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_RS02245 SAG_RS02360 SAG_RS02360 SAG_RS02360 1273451 1273657 - hypothetical protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_RS02360 SAG_RS02460 SAG_RS02460 SAG_RS02460 2055744 2056040 + hypothetical protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_RS02460 SAG_r01 SAG_r01 SAG_r01 21210 21326 + 5S ribosomal RNA rRNA gene19 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_r01 SAG_r02 SAG_r02 SAG_r02 27041 27157 + 5S ribosomal RNA rRNA gene32 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_r02 SAG_r03 SAG_r03 SAG_r03 96018 96134 + 5S ribosomal RNA rRNA gene122 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_r03 SAG_r04 SAG_r04 SAG_r04 255174 255290 + 5S ribosomal RNA rRNA gene306 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_r04 SAG_r05 SAG_r05 SAG_r05 422525 422641 + 5S ribosomal RNA rRNA gene494 http://www.ncbi.nlm.nih.gov/gene/?term=SAG_r05 Sa16SA Sa16SA Sa16SA 16404 17954 + 16S ribosomal RNA rRNA gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SA Sa16SB Sa16SB Sa16SB 22235 23785 + 16S ribosomal RNA rRNA gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SB Sa16SC Sa16SC Sa16SC 91212 92762 + 16S ribosomal RNA rRNA gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SC Sa16SD Sa16SD Sa16SD 165241 166791 + 16S ribosomal RNA rRNA gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SD Sa16SE Sa16SE Sa16SE 250368 251918 + 16S ribosomal RNA rRNA gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SE Sa16SF Sa16SF Sa16SF 348575 350125 + 16S ribosomal RNA rRNA gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SF Sa16SG Sa16SG Sa16SG 417719 419269 + 16S ribosomal RNA rRNA gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Sa16SG Sa23SA Sa23SA Sa23SA 18234 21136 + 23S ribosomal RNA rRNA gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SA Sa23SB Sa23SB Sa23SB 24065 26967 + 23S ribosomal RNA rRNA gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SB Sa23SC Sa23SC Sa23SC 93042 95944 + 23S ribosomal RNA rRNA gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SC Sa23SD Sa23SD Sa23SD 167071 169973 + 23S ribosomal RNA rRNA gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SD Sa23SE Sa23SE Sa23SE 252198 255100 + 23S ribosomal RNA rRNA gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SE Sa23SF Sa23SF Sa23SF 350405 353307 + 23S ribosomal RNA rRNA gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SF Sa23SG Sa23SG Sa23SG 419549 422451 + 23S ribosomal RNA rRNA gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Sa23SG Sa5SD Sa5SD Sa5SD 170047 170163 + 5S ribosomal RNA rRNA gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Sa5SD Sa5SF Sa5SF Sa5SF 353381 353497 + 5S ribosomal RNA rRNA gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Sa5SF tRNA-Ala-1 tRNA-Ala-1 tRNA-Ala-1 166844 166916 + tRNA-Ala tRNA gene207 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-1 tRNA-Ala-2 tRNA-Ala-2 tRNA-Ala-2 18007 18079 + tRNA-Ala tRNA gene17 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-2 tRNA-Ala-3 tRNA-Ala-3 tRNA-Ala-3 23838 23910 + tRNA-Ala tRNA gene30 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-3 tRNA-Ala-4 tRNA-Ala-4 tRNA-Ala-4 251971 252043 + tRNA-Ala tRNA gene304 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-4 tRNA-Ala-5 tRNA-Ala-5 tRNA-Ala-5 350178 350250 + tRNA-Ala tRNA gene414 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-5 tRNA-Ala-6 tRNA-Ala-6 tRNA-Ala-6 419322 419394 + tRNA-Ala tRNA gene492 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-6 tRNA-Ala-7 tRNA-Ala-7 tRNA-Ala-7 92815 92887 + tRNA-Ala tRNA gene120 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ala-7 tRNA-Arg-1 tRNA-Arg-1 tRNA-Arg-1 1152666 1152737 - tRNA-Arg tRNA gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Arg-1 tRNA-Arg-2 tRNA-Arg-2 tRNA-Arg-2 2157245 2157318 + tRNA-Arg tRNA gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Arg-2 tRNA-Arg-3 tRNA-Arg-3 tRNA-Arg-3 21936 22009 + tRNA-Arg tRNA gene27 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Arg-3 tRNA-Arg-4 tRNA-Arg-4 tRNA-Arg-4 27767 27840 + tRNA-Arg tRNA gene40 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Arg-4 tRNA-Arg-5 tRNA-Arg-5 tRNA-Arg-5 558712 558783 + tRNA-Arg tRNA gene634 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Arg-5 tRNA-Asn-1 tRNA-Asn-1 tRNA-Asn-1 170169 170242 + tRNA-Asn tRNA gene210 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Asn-1 tRNA-Asn-2 tRNA-Asn-2 tRNA-Asn-2 2156879 2156952 - tRNA-Asn tRNA gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Asn-2 tRNA-Asn-3 tRNA-Asn-3 tRNA-Asn-3 353503 353576 + tRNA-Asn tRNA gene417 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Asn-3 tRNA-Asp-1 tRNA-Asp-1 tRNA-Asp-1 21405 21477 + tRNA-Asp tRNA gene21 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Asp-1 tRNA-Asp-2 tRNA-Asp-2 tRNA-Asp-2 27236 27308 + tRNA-Asp tRNA gene34 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Asp-2 tRNA-Asp-3 tRNA-Asp-3 tRNA-Asp-3 96213 96285 + tRNA-Asp tRNA gene124 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Asp-3 tRNA-Cys-1 tRNA-Cys-1 tRNA-Cys-1 1833034 1833104 + tRNA-Cys tRNA gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Cys-1 tRNA-Gln-1 tRNA-Gln-1 tRNA-Gln-1 1154135 1154209 - tRNA-Gln tRNA gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gln-1 tRNA-Gln-2 tRNA-Gln-2 tRNA-Gln-2 1366872 1366943 - tRNA-Gln tRNA gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gln-2 tRNA-Gln-3 tRNA-Gln-3 tRNA-Gln-3 256159 256230 + tRNA-Gln tRNA gene317 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gln-3 tRNA-Gln-4 tRNA-Gln-4 tRNA-Gln-4 97243 97314 + tRNA-Gln tRNA gene136 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gln-4 tRNA-Glu-1 tRNA-Glu-1 tRNA-Glu-1 1366792 1366863 - tRNA-Glu tRNA gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Glu-1 tRNA-Glu-2 tRNA-Glu-2 tRNA-Glu-2 2156982 2157053 - tRNA-Glu tRNA gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Glu-2 tRNA-Glu-3 tRNA-Glu-3 tRNA-Glu-3 255563 255634 + tRNA-Glu tRNA gene310 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Glu-3 tRNA-Glu-4 tRNA-Glu-4 tRNA-Glu-4 422914 422985 + tRNA-Glu tRNA gene498 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Glu-4 tRNA-Glu-5 tRNA-Glu-5 tRNA-Glu-5 96647 96718 + tRNA-Glu tRNA gene129 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Glu-5 tRNA-Gly-1 tRNA-Gly-1 tRNA-Gly-1 21760 21831 + tRNA-Gly tRNA gene25 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gly-1 tRNA-Gly-2 tRNA-Gly-2 tRNA-Gly-2 27591 27662 + tRNA-Gly tRNA gene38 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gly-2 tRNA-Gly-3 tRNA-Gly-3 tRNA-Gly-3 28387 28457 + tRNA-Gly tRNA gene47 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gly-3 tRNA-Gly-4 tRNA-Gly-4 tRNA-Gly-4 255372 255442 + tRNA-Gly tRNA gene308 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gly-4 tRNA-Gly-5 tRNA-Gly-5 tRNA-Gly-5 422723 422793 + tRNA-Gly tRNA gene496 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Gly-5 tRNA-His-1 tRNA-His-1 tRNA-His-1 256080 256152 + tRNA-His tRNA gene316 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-His-1 tRNA-His-2 tRNA-His-2 tRNA-His-2 97164 97236 + tRNA-His tRNA gene135 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-His-2 tRNA-Ile-1 tRNA-Ile-1 tRNA-Ile-1 28492 28565 + tRNA-Ile tRNA gene48 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ile-1 tRNA-Ile-2 tRNA-Ile-2 tRNA-Ile-2 255479 255555 + tRNA-Ile tRNA gene309 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ile-2 tRNA-Ile-3 tRNA-Ile-3 tRNA-Ile-3 422830 422906 + tRNA-Ile tRNA gene497 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ile-3 tRNA-Ile-4 tRNA-Ile-4 tRNA-Ile-4 96563 96639 + tRNA-Ile tRNA gene128 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ile-4 tRNA-Leu-1 tRNA-Leu-1 tRNA-Leu-1 21562 21643 + tRNA-Leu tRNA gene23 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-1 tRNA-Leu-2 tRNA-Leu-2 tRNA-Leu-2 21840 21924 + tRNA-Leu tRNA gene26 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-2 tRNA-Leu-3 tRNA-Leu-3 tRNA-Leu-3 27393 27474 + tRNA-Leu tRNA gene36 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-3 tRNA-Leu-4 tRNA-Leu-4 tRNA-Leu-4 27671 27755 + tRNA-Leu tRNA gene39 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-4 tRNA-Leu-5 tRNA-Leu-5 tRNA-Leu-5 256241 256324 + tRNA-Leu tRNA gene318 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-5 tRNA-Leu-6 tRNA-Leu-6 tRNA-Leu-6 96370 96451 + tRNA-Leu tRNA gene126 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-6 tRNA-Leu-7 tRNA-Leu-7 tRNA-Leu-7 97325 97408 + tRNA-Leu tRNA gene137 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-7 tRNA-Leu-8 tRNA-Leu-8 tRNA-Leu-8 118606 118691 + tRNA-Leu tRNA gene161 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Leu-8 tRNA-Lys-1 tRNA-Lys-1 tRNA-Lys-1 1962163 1962235 + tRNA-Lys tRNA gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Lys-1 tRNA-Lys-2 tRNA-Lys-2 tRNA-Lys-2 21480 21552 + tRNA-Lys tRNA gene22 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Lys-2 tRNA-Lys-3 tRNA-Lys-3 tRNA-Lys-3 27311 27383 + tRNA-Lys tRNA gene35 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Lys-3 tRNA-Lys-4 tRNA-Lys-4 tRNA-Lys-4 96288 96360 + tRNA-Lys tRNA gene125 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Lys-4 tRNA-Met-1 tRNA-Met-1 tRNA-Met-1 27937 28010 + tRNA-Met tRNA gene42 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Met-1 tRNA-Met-2 tRNA-Met-2 tRNA-Met-2 28030 28103 + tRNA-Met tRNA gene43 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Met-2 tRNA-Met-3 tRNA-Met-3 tRNA-Met-3 28219 28292 + tRNA-Met tRNA gene45 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Met-3 tRNA-Met-4 tRNA-Met-4 tRNA-Met-4 255748 255821 + tRNA-Met tRNA gene312 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Met-4 tRNA-Met-5 tRNA-Met-5 tRNA-Met-5 96832 96905 + tRNA-Met tRNA gene131 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Met-5 tRNA-Phe-1 tRNA-Phe-1 tRNA-Phe-1 28295 28367 + tRNA-Phe tRNA gene46 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Phe-1 tRNA-Phe-2 tRNA-Phe-2 tRNA-Phe-2 255824 255896 + tRNA-Phe tRNA gene313 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Phe-2 tRNA-Phe-3 tRNA-Phe-3 tRNA-Phe-3 96908 96980 + tRNA-Phe tRNA gene132 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Phe-3 tRNA-Pro-1 tRNA-Pro-1 tRNA-Pro-1 22017 22090 + tRNA-Pro tRNA gene28 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Pro-1 tRNA-Pro-2 tRNA-Pro-2 tRNA-Pro-2 27848 27921 + tRNA-Pro tRNA gene41 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Pro-2 tRNA-Ser-1 tRNA-Ser-1 tRNA-Ser-1 28119 28208 + tRNA-Ser tRNA gene44 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ser-1 tRNA-Ser-2 tRNA-Ser-2 tRNA-Ser-2 28579 28666 + tRNA-Ser tRNA gene49 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ser-2 tRNA-Ser-3 tRNA-Ser-3 tRNA-Ser-3 255648 255737 + tRNA-Ser tRNA gene311 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ser-3 tRNA-Ser-4 tRNA-Ser-4 tRNA-Ser-4 385359 385446 + tRNA-Ser tRNA gene456 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ser-4 tRNA-Ser-5 tRNA-Ser-5 tRNA-Ser-5 96732 96821 + tRNA-Ser tRNA gene130 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Ser-5 tRNA-Thr-1 tRNA-Thr-1 tRNA-Thr-1 21654 21726 + tRNA-Thr tRNA gene24 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Thr-1 tRNA-Thr-2 tRNA-Thr-2 tRNA-Thr-2 27485 27557 + tRNA-Thr tRNA gene37 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Thr-2 tRNA-Thr-3 tRNA-Thr-3 tRNA-Thr-3 454477 454547 - tRNA-Thr tRNA gene527 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Thr-3 tRNA-Thr-4 tRNA-Thr-4 tRNA-Thr-4 96462 96534 + tRNA-Thr tRNA gene127 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Thr-4 tRNA-Trp-1 tRNA-Trp-1 tRNA-Trp-1 255995 256065 + tRNA-Trp tRNA gene315 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Trp-1 tRNA-Trp-2 tRNA-Trp-2 tRNA-Trp-2 97079 97149 + tRNA-Trp tRNA gene134 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Trp-2 tRNA-Tyr-1 tRNA-Tyr-1 tRNA-Tyr-1 1154215 1154295 - tRNA-Tyr tRNA gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Tyr-1 tRNA-Tyr-2 tRNA-Tyr-2 tRNA-Tyr-2 255908 255988 + tRNA-Tyr tRNA gene314 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Tyr-2 tRNA-Tyr-3 tRNA-Tyr-3 tRNA-Tyr-3 96992 97072 + tRNA-Tyr tRNA gene133 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Tyr-3 tRNA-Val-1 tRNA-Val-1 tRNA-Val-1 21330 21402 + tRNA-Val tRNA gene20 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Val-1 tRNA-Val-2 tRNA-Val-2 tRNA-Val-2 27161 27233 + tRNA-Val tRNA gene33 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Val-2 tRNA-Val-3 tRNA-Val-3 tRNA-Val-3 255294 255366 + tRNA-Val tRNA gene307 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Val-3 tRNA-Val-4 tRNA-Val-4 tRNA-Val-4 422645 422717 + tRNA-Val tRNA gene495 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Val-4 tRNA-Val-5 tRNA-Val-5 tRNA-Val-5 96138 96210 + tRNA-Val tRNA gene123 http://www.ncbi.nlm.nih.gov/gene/?term=tRNA-Val-5