##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM726v1
#!genome-build-accession NCBI_Assembly:GCF_000007265.1
##sequence-region NC_004116.1 1 2160267
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=208435
NC_004116.1	RefSeq	region	1	2160267	.	+	.	ID=id0;Dbxref=taxon:208435;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;serotype=V;strain=2603V/R
NC_004116.1	RefSeq	gene	102	1463	.	+	.	ID=gene0;Dbxref=GeneID:1012723;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SAG0001
NC_004116.1	RefSeq	CDS	102	1463	.	+	0	ID=cds0;Parent=gene0;Dbxref=Genbank:NP_687037.1,GeneID:1012723;Name=NP_687037.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosome replication initiator DnaA;protein_id=NP_687037.1;transl_table=11
NC_004116.1	RefSeq	gene	1618	2754	.	+	.	ID=gene1;Dbxref=GeneID:1012719;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SAG0002
NC_004116.1	RefSeq	CDS	1618	2754	.	+	0	ID=cds1;Parent=gene1;Dbxref=Genbank:NP_687038.1,GeneID:1012719;Name=NP_687038.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=NP_687038.1;transl_table=11
NC_004116.1	RefSeq	gene	2824	3705	.	+	.	ID=gene2;Dbxref=GeneID:1012720;Name=SAG0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0003
NC_004116.1	RefSeq	CDS	2824	3705	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:NP_687039.1,GeneID:1012720;Name=NP_687039.1;Note=identified by match to PFAM protein family HMM PF00781;gbkey=CDS;product=diacylglycerol kinase catalytic subunit;protein_id=NP_687039.1;transl_table=11
NC_004116.1	RefSeq	gene	3715	3912	.	+	.	ID=gene3;Dbxref=GeneID:1012721;Name=SAG0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0004
NC_004116.1	RefSeq	CDS	3715	3912	.	+	0	ID=cds3;Parent=gene3;Dbxref=Genbank:NP_687040.1,GeneID:1012721;Name=NP_687040.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687040.1;transl_table=11
NC_004116.1	RefSeq	gene	4114	4317	.	+	.	ID=gene4;Dbxref=GeneID:1012722;Name=SAG0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0005
NC_004116.1	RefSeq	CDS	4114	4317	.	+	0	ID=cds4;Parent=gene4;Dbxref=Genbank:NP_687041.1,GeneID:1012722;Name=NP_687041.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687041.1;transl_table=11
NC_004116.1	RefSeq	gene	4477	5592	.	+	.	ID=gene5;Dbxref=GeneID:1012724;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=SAG0006
NC_004116.1	RefSeq	CDS	4477	5592	.	+	0	ID=cds5;Parent=gene5;Dbxref=Genbank:NP_687042.1,GeneID:1012724;Name=NP_687042.1;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=NP_687042.1;transl_table=11
NC_004116.1	RefSeq	gene	5676	6251	.	+	.	ID=gene6;Dbxref=GeneID:1012725;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=SAG0007
NC_004116.1	RefSeq	CDS	5676	6251	.	+	0	ID=cds6;Parent=gene6;Dbxref=Genbank:NP_687043.1,GeneID:1012725;Name=NP_687043.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=NP_687043.1;transl_table=11
NC_004116.1	RefSeq	gene	6248	9745	.	+	.	ID=gene7;Dbxref=GeneID:1012726;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=SAG0008
NC_004116.1	RefSeq	CDS	6248	9745	.	+	0	ID=cds7;Parent=gene7;Dbxref=Genbank:NP_687044.1,GeneID:1012726;Name=NP_687044.1;Note=identified by match to PFAM protein family HMM PF00270;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=NP_687044.1;transl_table=11
NC_004116.1	RefSeq	gene	9906	10001	.	+	.	ID=gene8;Dbxref=GeneID:1012727;Name=SAG0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0009
NC_004116.1	RefSeq	CDS	9906	10001	.	+	0	ID=cds8;Parent=gene8;Dbxref=Genbank:NP_687045.1,GeneID:1012727;Name=NP_687045.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687045.1;transl_table=11
NC_004116.1	RefSeq	gene	10036	10308	.	+	.	ID=gene9;Dbxref=GeneID:1012728;Name=SAG0010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0010
NC_004116.1	RefSeq	CDS	10036	10308	.	+	0	ID=cds9;Parent=gene9;Dbxref=Genbank:NP_687046.1,GeneID:1012728;Name=NP_687046.1;Note=identified by match to PFAM protein family HMM PF01479;gbkey=CDS;product=S4 domain-containing protein;protein_id=NP_687046.1;transl_table=11
NC_004116.1	RefSeq	gene	10295	10666	.	+	.	ID=gene10;Dbxref=GeneID:1012729;Name=SAG0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0011
NC_004116.1	RefSeq	CDS	10295	10666	.	+	0	ID=cds10;Parent=gene10;Dbxref=Genbank:NP_687047.1,GeneID:1012729;Name=NP_687047.1;Note=similar to OMNI:NTL01SPL0011%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687047.1;transl_table=11
NC_004116.1	RefSeq	gene	10669	10803	.	+	.	ID=gene11;Dbxref=GeneID:1012730;Name=SAG0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0012
NC_004116.1	RefSeq	CDS	10669	10803	.	+	0	ID=cds11;Parent=gene11;Dbxref=Genbank:NP_687048.1,GeneID:1012730;Name=NP_687048.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687048.1;transl_table=11
NC_004116.1	RefSeq	gene	10803	12089	.	+	.	ID=gene12;Dbxref=GeneID:1012731;Name=SAG0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0013
NC_004116.1	RefSeq	CDS	10803	12089	.	+	0	ID=cds12;Parent=gene12;Dbxref=Genbank:NP_687049.1,GeneID:1012731;Name=NP_687049.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687049.1;transl_table=11
NC_004116.1	RefSeq	gene	12091	13365	.	+	.	ID=gene13;Dbxref=GeneID:1012732;Name=SAG0014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0014
NC_004116.1	RefSeq	CDS	12091	13365	.	+	0	ID=cds13;Parent=gene13;Dbxref=Genbank:NP_687050.1,GeneID:1012732;Name=NP_687050.1;gbkey=CDS;product=MesJ/Ycf62 family protein;protein_id=NP_687050.1;transl_table=11
NC_004116.1	RefSeq	gene	13370	13912	.	+	.	ID=gene14;Dbxref=GeneID:1012733;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=SAG0015
NC_004116.1	RefSeq	CDS	13370	13912	.	+	0	ID=cds14;Parent=gene14;Dbxref=Genbank:NP_687051.1,GeneID:1012733;Name=NP_687051.1;Note=Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine%2C respectively;gbkey=CDS;gene=hpt;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=NP_687051.1;transl_table=11
NC_004116.1	RefSeq	gene	13935	15911	.	+	.	ID=gene15;Dbxref=GeneID:1012734;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=SAG0016
NC_004116.1	RefSeq	CDS	13935	15911	.	+	0	ID=cds15;Parent=gene15;Dbxref=Genbank:NP_687052.1,GeneID:1012734;Name=NP_687052.1;Note=identified by match to PFAM protein family HMM PF00004;gbkey=CDS;gene=ftsH;product=cell division protein FtsH;protein_id=NP_687052.1;transl_table=11
NC_004116.1	RefSeq	gene	16404	17954	.	+	.	ID=gene16;Dbxref=GeneID:1012735;Name=Sa16SA;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SA
NC_004116.1	RefSeq	rRNA	16404	17954	.	+	.	ID=rna0;Parent=gene16;Dbxref=GeneID:1012735;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	16404	17954	.	+	.	ID=id1;Parent=rna0;Dbxref=GeneID:1012735;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	18007	18079	.	+	.	ID=gene17;Dbxref=GeneID:1012736;Name=tRNA-Ala-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-2
NC_004116.1	RefSeq	tRNA	18007	18079	.	+	.	ID=rna1;Parent=gene17;Dbxref=GeneID:1012736;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	18007	18079	.	+	.	ID=id2;Parent=rna1;Dbxref=GeneID:1012736;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	18234	21136	.	+	.	ID=gene18;Dbxref=GeneID:1012737;Name=Sa23SA;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SA
NC_004116.1	RefSeq	rRNA	18234	21136	.	+	.	ID=rna2;Parent=gene18;Dbxref=GeneID:1012737;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	18234	21136	.	+	.	ID=id3;Parent=rna2;Dbxref=GeneID:1012737;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	21210	21326	.	+	.	ID=gene19;Dbxref=GeneID:5228961;Name=SAG_r01;gbkey=Gene;gene_biotype=rRNA;locus_tag=SAG_r01
NC_004116.1	RefSeq	rRNA	21210	21326	.	+	.	ID=rna3;Parent=gene19;Dbxref=GeneID:5228961;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	21210	21326	.	+	.	ID=id4;Parent=rna3;Dbxref=GeneID:5228961;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	21330	21402	.	+	.	ID=gene20;Dbxref=GeneID:1012738;Name=tRNA-Val-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Val-1
NC_004116.1	RefSeq	tRNA	21330	21402	.	+	.	ID=rna4;Parent=gene20;Dbxref=GeneID:1012738;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	exon	21330	21402	.	+	.	ID=id5;Parent=rna4;Dbxref=GeneID:1012738;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	gene	21405	21477	.	+	.	ID=gene21;Dbxref=GeneID:1012739;Name=tRNA-Asp-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Asp-1
NC_004116.1	RefSeq	tRNA	21405	21477	.	+	.	ID=rna5;Parent=gene21;Dbxref=GeneID:1012739;gbkey=tRNA;product=tRNA-Asp
NC_004116.1	RefSeq	exon	21405	21477	.	+	.	ID=id6;Parent=rna5;Dbxref=GeneID:1012739;gbkey=tRNA;product=tRNA-Asp
NC_004116.1	RefSeq	gene	21480	21552	.	+	.	ID=gene22;Dbxref=GeneID:1012740;Name=tRNA-Lys-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Lys-2
NC_004116.1	RefSeq	tRNA	21480	21552	.	+	.	ID=rna6;Parent=gene22;Dbxref=GeneID:1012740;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	exon	21480	21552	.	+	.	ID=id7;Parent=rna6;Dbxref=GeneID:1012740;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	gene	21562	21643	.	+	.	ID=gene23;Dbxref=GeneID:1012741;Name=tRNA-Leu-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-1
NC_004116.1	RefSeq	tRNA	21562	21643	.	+	.	ID=rna7;Parent=gene23;Dbxref=GeneID:1012741;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	21562	21643	.	+	.	ID=id8;Parent=rna7;Dbxref=GeneID:1012741;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	21654	21726	.	+	.	ID=gene24;Dbxref=GeneID:1012742;Name=tRNA-Thr-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Thr-1
NC_004116.1	RefSeq	tRNA	21654	21726	.	+	.	ID=rna8;Parent=gene24;Dbxref=GeneID:1012742;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	exon	21654	21726	.	+	.	ID=id9;Parent=rna8;Dbxref=GeneID:1012742;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	gene	21760	21831	.	+	.	ID=gene25;Dbxref=GeneID:1012743;Name=tRNA-Gly-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gly-1
NC_004116.1	RefSeq	tRNA	21760	21831	.	+	.	ID=rna9;Parent=gene25;Dbxref=GeneID:1012743;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	exon	21760	21831	.	+	.	ID=id10;Parent=rna9;Dbxref=GeneID:1012743;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	gene	21840	21924	.	+	.	ID=gene26;Dbxref=GeneID:1012744;Name=tRNA-Leu-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-2
NC_004116.1	RefSeq	tRNA	21840	21924	.	+	.	ID=rna10;Parent=gene26;Dbxref=GeneID:1012744;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	21840	21924	.	+	.	ID=id11;Parent=rna10;Dbxref=GeneID:1012744;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	21936	22009	.	+	.	ID=gene27;Dbxref=GeneID:1012745;Name=tRNA-Arg-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Arg-3
NC_004116.1	RefSeq	tRNA	21936	22009	.	+	.	ID=rna11;Parent=gene27;Dbxref=GeneID:1012745;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	exon	21936	22009	.	+	.	ID=id12;Parent=rna11;Dbxref=GeneID:1012745;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	gene	22017	22090	.	+	.	ID=gene28;Dbxref=GeneID:1012746;Name=tRNA-Pro-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Pro-1
NC_004116.1	RefSeq	tRNA	22017	22090	.	+	.	ID=rna12;Parent=gene28;Dbxref=GeneID:1012746;gbkey=tRNA;product=tRNA-Pro
NC_004116.1	RefSeq	exon	22017	22090	.	+	.	ID=id13;Parent=rna12;Dbxref=GeneID:1012746;gbkey=tRNA;product=tRNA-Pro
NC_004116.1	RefSeq	gene	22235	23785	.	+	.	ID=gene29;Dbxref=GeneID:1012747;Name=Sa16SB;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SB
NC_004116.1	RefSeq	rRNA	22235	23785	.	+	.	ID=rna13;Parent=gene29;Dbxref=GeneID:1012747;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	22235	23785	.	+	.	ID=id14;Parent=rna13;Dbxref=GeneID:1012747;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	23838	23910	.	+	.	ID=gene30;Dbxref=GeneID:1012748;Name=tRNA-Ala-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-3
NC_004116.1	RefSeq	tRNA	23838	23910	.	+	.	ID=rna14;Parent=gene30;Dbxref=GeneID:1012748;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	23838	23910	.	+	.	ID=id15;Parent=rna14;Dbxref=GeneID:1012748;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	24065	26967	.	+	.	ID=gene31;Dbxref=GeneID:1012749;Name=Sa23SB;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SB
NC_004116.1	RefSeq	rRNA	24065	26967	.	+	.	ID=rna15;Parent=gene31;Dbxref=GeneID:1012749;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	24065	26967	.	+	.	ID=id16;Parent=rna15;Dbxref=GeneID:1012749;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	27041	27157	.	+	.	ID=gene32;Dbxref=GeneID:5228960;Name=SAG_r02;gbkey=Gene;gene_biotype=rRNA;locus_tag=SAG_r02
NC_004116.1	RefSeq	rRNA	27041	27157	.	+	.	ID=rna16;Parent=gene32;Dbxref=GeneID:5228960;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	27041	27157	.	+	.	ID=id17;Parent=rna16;Dbxref=GeneID:5228960;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	27161	27233	.	+	.	ID=gene33;Dbxref=GeneID:1012750;Name=tRNA-Val-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Val-2
NC_004116.1	RefSeq	tRNA	27161	27233	.	+	.	ID=rna17;Parent=gene33;Dbxref=GeneID:1012750;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	exon	27161	27233	.	+	.	ID=id18;Parent=rna17;Dbxref=GeneID:1012750;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	gene	27236	27308	.	+	.	ID=gene34;Dbxref=GeneID:1012751;Name=tRNA-Asp-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Asp-2
NC_004116.1	RefSeq	tRNA	27236	27308	.	+	.	ID=rna18;Parent=gene34;Dbxref=GeneID:1012751;gbkey=tRNA;product=tRNA-Asp
NC_004116.1	RefSeq	exon	27236	27308	.	+	.	ID=id19;Parent=rna18;Dbxref=GeneID:1012751;gbkey=tRNA;product=tRNA-Asp
NC_004116.1	RefSeq	gene	27311	27383	.	+	.	ID=gene35;Dbxref=GeneID:1012752;Name=tRNA-Lys-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Lys-3
NC_004116.1	RefSeq	tRNA	27311	27383	.	+	.	ID=rna19;Parent=gene35;Dbxref=GeneID:1012752;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	exon	27311	27383	.	+	.	ID=id20;Parent=rna19;Dbxref=GeneID:1012752;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	gene	27393	27474	.	+	.	ID=gene36;Dbxref=GeneID:1012753;Name=tRNA-Leu-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-3
NC_004116.1	RefSeq	tRNA	27393	27474	.	+	.	ID=rna20;Parent=gene36;Dbxref=GeneID:1012753;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	27393	27474	.	+	.	ID=id21;Parent=rna20;Dbxref=GeneID:1012753;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	27485	27557	.	+	.	ID=gene37;Dbxref=GeneID:1012754;Name=tRNA-Thr-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Thr-2
NC_004116.1	RefSeq	tRNA	27485	27557	.	+	.	ID=rna21;Parent=gene37;Dbxref=GeneID:1012754;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	exon	27485	27557	.	+	.	ID=id22;Parent=rna21;Dbxref=GeneID:1012754;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	gene	27591	27662	.	+	.	ID=gene38;Dbxref=GeneID:1012755;Name=tRNA-Gly-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gly-2
NC_004116.1	RefSeq	tRNA	27591	27662	.	+	.	ID=rna22;Parent=gene38;Dbxref=GeneID:1012755;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	exon	27591	27662	.	+	.	ID=id23;Parent=rna22;Dbxref=GeneID:1012755;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	gene	27671	27755	.	+	.	ID=gene39;Dbxref=GeneID:1012756;Name=tRNA-Leu-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-4
NC_004116.1	RefSeq	tRNA	27671	27755	.	+	.	ID=rna23;Parent=gene39;Dbxref=GeneID:1012756;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	27671	27755	.	+	.	ID=id24;Parent=rna23;Dbxref=GeneID:1012756;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	27767	27840	.	+	.	ID=gene40;Dbxref=GeneID:1012757;Name=tRNA-Arg-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Arg-4
NC_004116.1	RefSeq	tRNA	27767	27840	.	+	.	ID=rna24;Parent=gene40;Dbxref=GeneID:1012757;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	exon	27767	27840	.	+	.	ID=id25;Parent=rna24;Dbxref=GeneID:1012757;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	gene	27848	27921	.	+	.	ID=gene41;Dbxref=GeneID:1012758;Name=tRNA-Pro-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Pro-2
NC_004116.1	RefSeq	tRNA	27848	27921	.	+	.	ID=rna25;Parent=gene41;Dbxref=GeneID:1012758;gbkey=tRNA;product=tRNA-Pro
NC_004116.1	RefSeq	exon	27848	27921	.	+	.	ID=id26;Parent=rna25;Dbxref=GeneID:1012758;gbkey=tRNA;product=tRNA-Pro
NC_004116.1	RefSeq	gene	27937	28010	.	+	.	ID=gene42;Dbxref=GeneID:1012759;Name=tRNA-Met-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Met-1
NC_004116.1	RefSeq	tRNA	27937	28010	.	+	.	ID=rna26;Parent=gene42;Dbxref=GeneID:1012759;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	exon	27937	28010	.	+	.	ID=id27;Parent=rna26;Dbxref=GeneID:1012759;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	gene	28030	28103	.	+	.	ID=gene43;Dbxref=GeneID:1012760;Name=tRNA-Met-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Met-2
NC_004116.1	RefSeq	tRNA	28030	28103	.	+	.	ID=rna27;Parent=gene43;Dbxref=GeneID:1012760;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	exon	28030	28103	.	+	.	ID=id28;Parent=rna27;Dbxref=GeneID:1012760;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	gene	28119	28208	.	+	.	ID=gene44;Dbxref=GeneID:1012761;Name=tRNA-Ser-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ser-1
NC_004116.1	RefSeq	tRNA	28119	28208	.	+	.	ID=rna28;Parent=gene44;Dbxref=GeneID:1012761;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	exon	28119	28208	.	+	.	ID=id29;Parent=rna28;Dbxref=GeneID:1012761;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	gene	28219	28292	.	+	.	ID=gene45;Dbxref=GeneID:1012762;Name=tRNA-Met-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Met-3
NC_004116.1	RefSeq	tRNA	28219	28292	.	+	.	ID=rna29;Parent=gene45;Dbxref=GeneID:1012762;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	exon	28219	28292	.	+	.	ID=id30;Parent=rna29;Dbxref=GeneID:1012762;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	gene	28295	28367	.	+	.	ID=gene46;Dbxref=GeneID:1012763;Name=tRNA-Phe-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Phe-1
NC_004116.1	RefSeq	tRNA	28295	28367	.	+	.	ID=rna30;Parent=gene46;Dbxref=GeneID:1012763;gbkey=tRNA;product=tRNA-Phe
NC_004116.1	RefSeq	exon	28295	28367	.	+	.	ID=id31;Parent=rna30;Dbxref=GeneID:1012763;gbkey=tRNA;product=tRNA-Phe
NC_004116.1	RefSeq	gene	28387	28457	.	+	.	ID=gene47;Dbxref=GeneID:1012764;Name=tRNA-Gly-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gly-3
NC_004116.1	RefSeq	tRNA	28387	28457	.	+	.	ID=rna31;Parent=gene47;Dbxref=GeneID:1012764;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	exon	28387	28457	.	+	.	ID=id32;Parent=rna31;Dbxref=GeneID:1012764;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	gene	28492	28565	.	+	.	ID=gene48;Dbxref=GeneID:1012765;Name=tRNA-Ile-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ile-1
NC_004116.1	RefSeq	tRNA	28492	28565	.	+	.	ID=rna32;Parent=gene48;Dbxref=GeneID:1012765;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	exon	28492	28565	.	+	.	ID=id33;Parent=rna32;Dbxref=GeneID:1012765;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	gene	28579	28666	.	+	.	ID=gene49;Dbxref=GeneID:1012766;Name=tRNA-Ser-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ser-2
NC_004116.1	RefSeq	tRNA	28579	28666	.	+	.	ID=rna33;Parent=gene49;Dbxref=GeneID:1012766;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	exon	28579	28666	.	+	.	ID=id34;Parent=rna33;Dbxref=GeneID:1012766;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	gene	28902	30245	.	+	.	ID=gene50;Dbxref=GeneID:1012767;Name=pscB;gbkey=Gene;gene=pscB;gene_biotype=protein_coding;locus_tag=SAG0017
NC_004116.1	RefSeq	CDS	28902	30245	.	+	0	ID=cds16;Parent=gene50;Dbxref=Genbank:NP_687053.1,GeneID:1012767;Name=NP_687053.1;Note=similar to GP:12667037%3B identified by sequence similarity;gbkey=CDS;gene=pscB;product=PcsB protein;protein_id=NP_687053.1;transl_table=11
NC_004116.1	RefSeq	gene	30369	31337	.	+	.	ID=gene51;Dbxref=GeneID:1012768;Name=prsA-1;gbkey=Gene;gene=prsA-1;gene_biotype=protein_coding;locus_tag=SAG0018
NC_004116.1	RefSeq	CDS	30369	31337	.	+	0	ID=cds17;Parent=gene51;Dbxref=Genbank:NP_687054.1,GeneID:1012768;Name=NP_687054.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;gene=prsA-1;product=ribose-phosphate pyrophosphokinase;protein_id=NP_687054.1;transl_table=11
NC_004116.1	RefSeq	gene	31445	32620	.	+	.	ID=gene52;Dbxref=GeneID:1012769;Name=SAG0019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0019
NC_004116.1	RefSeq	CDS	31445	32620	.	+	0	ID=cds18;Parent=gene52;Dbxref=Genbank:NP_687055.1,GeneID:1012769;Name=NP_687055.1;Note=catalyzes the transamination of the aromatic amino acid forming a ketoacid%3B first step in aromatic amino acid degradation in lactococci;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=NP_687055.1;transl_table=11
NC_004116.1	RefSeq	gene	32610	33371	.	+	.	ID=gene53;Dbxref=GeneID:1012770;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SAG0020
NC_004116.1	RefSeq	CDS	32610	33371	.	+	0	ID=cds19;Parent=gene53;Dbxref=Genbank:NP_687056.1,GeneID:1012770;Name=NP_687056.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=NP_687056.1;transl_table=11
NC_004116.1	RefSeq	gene	33461	34312	.	+	.	ID=gene54;Dbxref=GeneID:1012771;Name=SAG0021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0021
NC_004116.1	RefSeq	CDS	33461	34312	.	+	0	ID=cds20;Parent=gene54;Dbxref=Genbank:NP_687057.1,GeneID:1012771;Name=NP_687057.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=protease;protein_id=NP_687057.1;transl_table=11
NC_004116.1	RefSeq	gene	34390	35382	.	+	.	ID=gene55;Dbxref=GeneID:1012772;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=SAG0022
NC_004116.1	RefSeq	CDS	34390	35382	.	+	0	ID=cds21;Parent=gene55;Dbxref=Genbank:NP_687058.1,GeneID:1012772;Name=NP_687058.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;gbkey=CDS;gene=plsX;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=NP_687058.1;transl_table=11
NC_004116.1	RefSeq	gene	35393	35632	.	+	.	ID=gene56;Dbxref=GeneID:1012773;Name=acpP-1;gbkey=Gene;gene=acpP-1;gene_biotype=protein_coding;locus_tag=SAG0023
NC_004116.1	RefSeq	CDS	35393	35632	.	+	0	ID=cds22;Parent=gene56;Dbxref=Genbank:NP_687059.1,GeneID:1012773;Name=NP_687059.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=acpP-1;product=acyl carrier protein;protein_id=NP_687059.1;transl_table=11
NC_004116.1	RefSeq	gene	35756	36460	.	+	.	ID=gene57;Dbxref=GeneID:1012774;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=SAG0024
NC_004116.1	RefSeq	CDS	35756	36460	.	+	0	ID=cds23;Parent=gene57;Dbxref=Genbank:NP_687060.1,GeneID:1012774;Name=NP_687060.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=NP_687060.1;transl_table=11
NC_004116.1	RefSeq	gene	36583	40308	.	+	.	ID=gene58;Dbxref=GeneID:1012775;Name=SAG0025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0025
NC_004116.1	RefSeq	CDS	36583	40308	.	+	0	ID=cds24;Parent=gene58;Dbxref=Genbank:NP_687061.1,GeneID:1012775;Name=NP_687061.1;Note=identified by match to PFAM protein family HMM PF02769;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=NP_687061.1;transl_table=11
NC_004116.1	RefSeq	gene	40720	42174	.	+	.	ID=gene59;Dbxref=GeneID:1012776;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=SAG0026
NC_004116.1	RefSeq	CDS	40720	42174	.	+	0	ID=cds25;Parent=gene59;Dbxref=Genbank:NP_687062.1,GeneID:1012776;Name=NP_687062.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=NP_687062.1;transl_table=11
NC_004116.1	RefSeq	gene	42202	43224	.	+	.	ID=gene60;Dbxref=GeneID:1012777;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=SAG0027
NC_004116.1	RefSeq	CDS	42202	43224	.	+	0	ID=cds26;Parent=gene60;Dbxref=Genbank:NP_687063.1,GeneID:1012777;Name=NP_687063.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;gene=purM;product=phosphoribosylaminoimidazole synthetase;protein_id=NP_687063.1;transl_table=11
NC_004116.1	RefSeq	gene	43392	43940	.	+	.	ID=gene61;Dbxref=GeneID:1012778;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SAG0028
NC_004116.1	RefSeq	CDS	43392	43940	.	+	0	ID=cds27;Parent=gene61;Dbxref=Genbank:NP_687064.1,GeneID:1012778;Name=NP_687064.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=NP_687064.1;transl_table=11
NC_004116.1	RefSeq	gene	43963	44715	.	+	.	ID=gene62;Dbxref=GeneID:1012779;Name=SAG0029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0029
NC_004116.1	RefSeq	CDS	43963	44715	.	+	0	ID=cds28;Parent=gene62;Dbxref=Genbank:NP_687065.1,GeneID:1012779;Name=NP_687065.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687065.1;transl_table=11
NC_004116.1	RefSeq	gene	44735	46282	.	+	.	ID=gene63;Dbxref=GeneID:1012780;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=SAG0030
NC_004116.1	RefSeq	CDS	44735	46282	.	+	0	ID=cds29;Parent=gene63;Dbxref=Genbank:NP_687066.1,GeneID:1012780;Name=NP_687066.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=NP_687066.1;transl_table=11
NC_004116.1	RefSeq	gene	46475	47374	.	+	.	ID=gene64;Dbxref=GeneID:1012781;Name=SAG0031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0031
NC_004116.1	RefSeq	CDS	46475	47374	.	+	0	ID=cds30;Parent=gene64;Dbxref=Genbank:NP_687067.1,GeneID:1012781;Name=NP_687067.1;Note=identified by match to PFAM protein family HMM PF01551;gbkey=CDS;product=M24/M37 family peptidase;protein_id=NP_687067.1;transl_table=11
NC_004116.1	RefSeq	gene	47521	48825	.	+	.	ID=gene65;Dbxref=GeneID:1012782;Name=SAG0032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0032
NC_004116.1	RefSeq	CDS	47521	48825	.	+	0	ID=cds31;Parent=gene65;Dbxref=Genbank:NP_687068.1,GeneID:1012782;Name=NP_687068.1;Note=identified by match to PFAM protein family HMM PF01476;gbkey=CDS;product=group B streptococcal surface immunogenic protein;protein_id=NP_687068.1;transl_table=11
NC_004116.1	RefSeq	gene	49072	49770	.	+	.	ID=gene66;Dbxref=GeneID:1012783;Name=SAG0033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0033
NC_004116.1	RefSeq	CDS	49072	49770	.	+	0	ID=cds32;Parent=gene66;Dbxref=Genbank:NP_687069.1,GeneID:1012783;Name=NP_687069.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=NP_687069.1;transl_table=11
NC_004116.1	RefSeq	gene	49817	51133	.	+	.	ID=gene67;Dbxref=GeneID:1012784;Name=SAG0034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0034
NC_004116.1	RefSeq	CDS	49817	51133	.	+	0	ID=cds33;Parent=gene67;Dbxref=Genbank:NP_687070.1,GeneID:1012784;Name=NP_687070.1;Note=identified by match to PFAM protein family HMM PF01547;gbkey=CDS;product=sugar ABC transporter sugar-binding protein;protein_id=NP_687070.1;transl_table=11
NC_004116.1	RefSeq	gene	51221	52108	.	+	.	ID=gene68;Dbxref=GeneID:1012785;Name=SAG0035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0035
NC_004116.1	RefSeq	CDS	51221	52108	.	+	0	ID=cds34;Parent=gene68;Dbxref=Genbank:NP_687071.1,GeneID:1012785;Name=NP_687071.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=NP_687071.1;transl_table=11
NC_004116.1	RefSeq	gene	52118	52948	.	+	.	ID=gene69;Dbxref=GeneID:1012786;Name=SAG0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0036
NC_004116.1	RefSeq	CDS	52118	52948	.	+	0	ID=cds35;Parent=gene69;Dbxref=Genbank:NP_687072.1,GeneID:1012786;Name=NP_687072.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=NP_687072.1;transl_table=11
NC_004116.1	RefSeq	gene	52961	53404	.	+	.	ID=gene70;Dbxref=GeneID:1012787;Name=SAG0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0037
NC_004116.1	RefSeq	CDS	52961	53404	.	+	0	ID=cds36;Parent=gene70;Dbxref=Genbank:NP_687073.1,GeneID:1012787;Name=NP_687073.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687073.1;transl_table=11
NC_004116.1	RefSeq	gene	53424	54086	.	+	.	ID=gene71;Dbxref=GeneID:1012788;Name=SAG0038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0038
NC_004116.1	RefSeq	CDS	53424	54086	.	+	0	ID=cds37;Parent=gene71;Dbxref=Genbank:NP_687074.1,GeneID:1012788;Name=NP_687074.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687074.1;transl_table=11
NC_004116.1	RefSeq	gene	54083	55000	.	+	.	ID=gene72;Dbxref=GeneID:1012789;Name=SAG0039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0039
NC_004116.1	RefSeq	CDS	54083	55000	.	+	0	ID=cds38;Parent=gene72;Dbxref=Genbank:NP_687075.1,GeneID:1012789;Name=NP_687075.1;Note=identified by match to PFAM protein family HMM PF00701;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=NP_687075.1;transl_table=11
NC_004116.1	RefSeq	gene	55017	55898	.	+	.	ID=gene73;Dbxref=GeneID:1012790;Name=SAG0040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0040
NC_004116.1	RefSeq	CDS	55017	55898	.	+	0	ID=cds39;Parent=gene73;Dbxref=Genbank:NP_687076.1,GeneID:1012790;Name=NP_687076.1;Note=identified by match to PFAM protein family HMM PF00480%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=ROK family protein;protein_id=NP_687076.1;transl_table=11
NC_004116.1	RefSeq	gene	55906	56883	.	+	.	ID=gene74;Dbxref=GeneID:1012791;Name=SAG0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0041
NC_004116.1	RefSeq	CDS	55906	56883	.	+	0	ID=cds40;Parent=gene74;Dbxref=Genbank:NP_687077.1,GeneID:1012791;Name=NP_687077.1;gbkey=CDS;product=acetyl xylan esterase;protein_id=NP_687077.1;transl_table=11
NC_004116.1	RefSeq	gene	56906	57709	.	-	.	ID=gene75;Dbxref=GeneID:1012792;Name=SAG0042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0042
NC_004116.1	RefSeq	CDS	56906	57709	.	-	0	ID=cds41;Parent=gene75;Dbxref=Genbank:NP_687078.1,GeneID:1012792;Name=NP_687078.1;Note=identified by match to PFAM protein family HMM PF01380;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=NP_687078.1;transl_table=11
NC_004116.1	RefSeq	gene	57991	59256	.	+	.	ID=gene76;Dbxref=GeneID:1012793;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=SAG0043
NC_004116.1	RefSeq	CDS	57991	59256	.	+	0	ID=cds42;Parent=gene76;Dbxref=Genbank:NP_687079.1,GeneID:1012793;Name=NP_687079.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=NP_687079.1;transl_table=11
NC_004116.1	RefSeq	gene	59537	60025	.	+	.	ID=gene77;Dbxref=GeneID:1012794;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SAG0044
NC_004116.1	RefSeq	CDS	59537	60025	.	+	0	ID=cds43;Parent=gene77;Dbxref=Genbank:NP_687080.1,GeneID:1012794;Name=NP_687080.1;Note=Catalyzes a step in the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purE;product=phosphoribosylaminoimidazole carboxylase catalytic subunit;protein_id=NP_687080.1;transl_table=11
NC_004116.1	RefSeq	gene	60012	61103	.	+	.	ID=gene78;Dbxref=GeneID:1012795;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=SAG0045
NC_004116.1	RefSeq	CDS	60012	61103	.	+	0	ID=cds44;Parent=gene78;Dbxref=Genbank:NP_687081.1,GeneID:1012795;Name=NP_687081.1;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purK;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=NP_687081.1;transl_table=11
NC_004116.1	RefSeq	gene	61157	62548	.	+	.	ID=gene79;Dbxref=GeneID:1012796;Name=SAG0046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0046
NC_004116.1	RefSeq	CDS	61157	62548	.	+	0	ID=cds45;Parent=gene79;Dbxref=Genbank:NP_687082.1,GeneID:1012796;Name=NP_687082.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687082.1;transl_table=11
NC_004116.1	RefSeq	gene	62573	63871	.	+	.	ID=gene80;Dbxref=GeneID:1012797;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=SAG0047
NC_004116.1	RefSeq	CDS	62573	63871	.	+	0	ID=cds46;Parent=gene80;Dbxref=Genbank:NP_687083.1,GeneID:1012797;Name=NP_687083.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=NP_687083.1;transl_table=11
NC_004116.1	RefSeq	gene	64023	64934	.	+	.	ID=gene81;Dbxref=GeneID:1012798;Name=SAG0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0048
NC_004116.1	RefSeq	CDS	64023	64934	.	+	0	ID=cds47;Parent=gene81;Dbxref=Genbank:NP_687084.1,GeneID:1012798;Name=NP_687084.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_687084.1;transl_table=11
NC_004116.1	RefSeq	gene	65231	66229	.	+	.	ID=gene82;Dbxref=GeneID:1012799;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=SAG0049
NC_004116.1	RefSeq	CDS	65231	66229	.	+	0	ID=cds48;Parent=gene82;Dbxref=Genbank:NP_687085.1,GeneID:1012799;Name=NP_687085.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=NP_687085.1;transl_table=11
NC_004116.1	RefSeq	gene	66381	66818	.	+	.	ID=gene83;Dbxref=GeneID:1012800;Name=SAG0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0050
NC_004116.1	RefSeq	CDS	66381	66818	.	+	0	ID=cds49;Parent=gene83;Dbxref=Genbank:NP_687086.1,GeneID:1012800;Name=NP_687086.1;Note=identified by match to PFAM protein family HMM PF01451;gbkey=CDS;product=phosphotyrosine protein phosphatase%2C low molecular weight;protein_id=NP_687086.1;transl_table=11
NC_004116.1	RefSeq	gene	66825	67205	.	+	.	ID=gene84;Dbxref=GeneID:1012801;Name=SAG0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0051
NC_004116.1	RefSeq	CDS	66825	67205	.	+	0	ID=cds50;Parent=gene84;Dbxref=Genbank:NP_687087.1,GeneID:1012801;Name=NP_687087.1;Note=identified by match to PFAM protein family HMM PF02493;gbkey=CDS;product=MORN motif-containing protein;protein_id=NP_687087.1;transl_table=11
NC_004116.1	RefSeq	gene	67202	68980	.	+	.	ID=gene85;Dbxref=GeneID:1012802;Name=SAG0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0052
NC_004116.1	RefSeq	CDS	67202	68980	.	+	0	ID=cds51;Parent=gene85;Dbxref=Genbank:NP_687088.1,GeneID:1012802;Name=NP_687088.1;Note=identified by match to PFAM protein family HMM PF01757;gbkey=CDS;product=hypothetical protein;protein_id=NP_687088.1;transl_table=11
NC_004116.1	RefSeq	gene	69250	71892	.	+	.	ID=gene86;Dbxref=GeneID:1012803;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;locus_tag=SAG0053
NC_004116.1	RefSeq	CDS	69250	71892	.	+	0	ID=cds52;Parent=gene86;Dbxref=Genbank:NP_687089.1,GeneID:1012803;Name=NP_687089.1;Note=identified by match to PFAM protein family HMM PF00171;gbkey=CDS;gene=adhE;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=NP_687089.1;transl_table=11
NC_004116.1	RefSeq	gene	72071	73087	.	+	.	ID=gene87;Dbxref=GeneID:1012804;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;gene_synonym=adhA;locus_tag=SAG0054
NC_004116.1	RefSeq	CDS	72071	73087	.	+	0	ID=cds53;Parent=gene87;Dbxref=Genbank:NP_687090.1,GeneID:1012804;Name=NP_687090.1;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adhP;product=alcohol dehydrogenase;protein_id=NP_687090.1;transl_table=11
NC_004116.1	RefSeq	gene	73207	74697	.	+	.	ID=gene88;Dbxref=GeneID:1012805;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=SAG0055
NC_004116.1	RefSeq	CDS	73207	74697	.	+	0	ID=cds54;Parent=gene88;Dbxref=Genbank:NP_687091.1,GeneID:1012805;Name=NP_687091.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=NP_687091.1;transl_table=11
NC_004116.1	RefSeq	gene	74844	76082	.	+	.	ID=gene89;Dbxref=GeneID:1012806;Name=SAG0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0056
NC_004116.1	RefSeq	CDS	74844	76082	.	+	0	ID=cds55;Parent=gene89;Dbxref=Genbank:NP_687092.1,GeneID:1012806;Name=NP_687092.1;Note=identified by match to PFAM protein family HMM PF01554;gbkey=CDS;product=MATE efflux family protein;protein_id=NP_687092.1;transl_table=11
NC_004116.1	RefSeq	gene	76288	76596	.	+	.	ID=gene90;Dbxref=GeneID:1012807;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=SAG0057
NC_004116.1	RefSeq	CDS	76288	76596	.	+	0	ID=cds56;Parent=gene90;Dbxref=Genbank:NP_687093.1,GeneID:1012807;Name=NP_687093.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=NP_687093.1;transl_table=11
NC_004116.1	RefSeq	gene	76701	77327	.	+	.	ID=gene91;Dbxref=GeneID:1012808;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=SAG0058
NC_004116.1	RefSeq	CDS	76701	77327	.	+	0	ID=cds57;Parent=gene91;Dbxref=Genbank:NP_687094.1,GeneID:1012808;Name=NP_687094.1;Note=binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=NP_687094.1;transl_table=11
NC_004116.1	RefSeq	gene	77351	77974	.	+	.	ID=gene92;Dbxref=GeneID:1012809;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SAG0059
NC_004116.1	RefSeq	CDS	77351	77974	.	+	0	ID=cds58;Parent=gene92;Dbxref=Genbank:NP_687095.1,GeneID:1012809;Name=NP_687095.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=NP_687095.1;transl_table=11
NC_004116.1	RefSeq	gene	77974	78270	.	+	.	ID=gene93;Dbxref=GeneID:1012810;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SAG0060
NC_004116.1	RefSeq	CDS	77974	78270	.	+	0	ID=cds59;Parent=gene93;Dbxref=Genbank:NP_687096.1,GeneID:1012810;Name=NP_687096.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=NP_687096.1;transl_table=11
NC_004116.1	RefSeq	gene	78288	79121	.	+	.	ID=gene94;Dbxref=GeneID:1012811;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=SAG0061
NC_004116.1	RefSeq	CDS	78288	79121	.	+	0	ID=cds60;Parent=gene94;Dbxref=Genbank:NP_687097.1,GeneID:1012811;Name=NP_687097.1;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;gbkey=CDS;gene=rplB;product=50S ribosomal protein L2;protein_id=NP_687097.1;transl_table=11
NC_004116.1	RefSeq	gene	79220	79498	.	+	.	ID=gene95;Dbxref=GeneID:1012812;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=SAG0062
NC_004116.1	RefSeq	CDS	79220	79498	.	+	0	ID=cds61;Parent=gene95;Dbxref=Genbank:NP_687098.1,GeneID:1012812;Name=NP_687098.1;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=NP_687098.1;transl_table=11
NC_004116.1	RefSeq	gene	79514	79858	.	+	.	ID=gene96;Dbxref=GeneID:1012813;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=SAG0063
NC_004116.1	RefSeq	CDS	79514	79858	.	+	0	ID=cds62;Parent=gene96;Dbxref=Genbank:NP_687099.1,GeneID:1012813;Name=NP_687099.1;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=NP_687099.1;transl_table=11
NC_004116.1	RefSeq	gene	79871	80524	.	+	.	ID=gene97;Dbxref=GeneID:1012814;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=SAG0064
NC_004116.1	RefSeq	CDS	79871	80524	.	+	0	ID=cds63;Parent=gene97;Dbxref=Genbank:NP_687100.1,GeneID:1012814;Name=NP_687100.1;Note=forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=NP_687100.1;transl_table=11
NC_004116.1	RefSeq	gene	80528	80941	.	+	.	ID=gene98;Dbxref=GeneID:1012815;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=SAG0065
NC_004116.1	RefSeq	CDS	80528	80941	.	+	0	ID=cds64;Parent=gene98;Dbxref=Genbank:NP_687101.1,GeneID:1012815;Name=NP_687101.1;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=NP_687101.1;transl_table=11
NC_004116.1	RefSeq	gene	80951	81157	.	+	.	ID=gene99;Dbxref=GeneID:1012816;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=SAG0066
NC_004116.1	RefSeq	CDS	80951	81157	.	+	0	ID=cds65;Parent=gene99;Dbxref=Genbank:NP_687102.1,GeneID:1012816;Name=NP_687102.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=NP_687102.1;transl_table=11
NC_004116.1	RefSeq	gene	81183	81443	.	+	.	ID=gene100;Dbxref=GeneID:1012817;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=SAG0067
NC_004116.1	RefSeq	CDS	81183	81443	.	+	0	ID=cds66;Parent=gene100;Dbxref=Genbank:NP_687103.1,GeneID:1012817;Name=NP_687103.1;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=NP_687103.1;transl_table=11
NC_004116.1	RefSeq	gene	81468	81836	.	+	.	ID=gene101;Dbxref=GeneID:1012818;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=SAG0068
NC_004116.1	RefSeq	CDS	81468	81836	.	+	0	ID=cds67;Parent=gene101;Dbxref=Genbank:NP_687104.1,GeneID:1012818;Name=NP_687104.1;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=NP_687104.1;transl_table=11
NC_004116.1	RefSeq	gene	81916	82221	.	+	.	ID=gene102;Dbxref=GeneID:1012819;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=SAG0069
NC_004116.1	RefSeq	CDS	81916	82221	.	+	0	ID=cds68;Parent=gene102;Dbxref=Genbank:NP_687105.1,GeneID:1012819;Name=NP_687105.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=NP_687105.1;transl_table=11
NC_004116.1	RefSeq	gene	82245	82787	.	+	.	ID=gene103;Dbxref=GeneID:1012820;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=SAG0070
NC_004116.1	RefSeq	CDS	82245	82787	.	+	0	ID=cds69;Parent=gene103;Dbxref=Genbank:NP_687106.1,GeneID:1012820;Name=NP_687106.1;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=NP_687106.1;transl_table=11
NC_004116.1	RefSeq	gene	82805	82990	.	+	.	ID=gene104;Dbxref=GeneID:1012821;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SAG0071
NC_004116.1	RefSeq	CDS	82805	82990	.	+	0	ID=cds70;Parent=gene104;Dbxref=Genbank:NP_687107.1,GeneID:1012821;Name=NP_687107.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=NP_687107.1;transl_table=11
NC_004116.1	RefSeq	gene	83145	83543	.	+	.	ID=gene105;Dbxref=GeneID:1012822;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=SAG0072
NC_004116.1	RefSeq	CDS	83145	83543	.	+	0	ID=cds71;Parent=gene105;Dbxref=Genbank:NP_687108.1,GeneID:1012822;Name=NP_687108.1;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=NP_687108.1;transl_table=11
NC_004116.1	RefSeq	gene	83653	84189	.	+	.	ID=gene106;Dbxref=GeneID:1012823;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=SAG0073
NC_004116.1	RefSeq	CDS	83653	84189	.	+	0	ID=cds72;Parent=gene106;Dbxref=Genbank:NP_687109.1,GeneID:1012823;Name=NP_687109.1;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=NP_687109.1;transl_table=11
NC_004116.1	RefSeq	gene	84290	84646	.	+	.	ID=gene107;Dbxref=GeneID:1012824;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=SAG0074
NC_004116.1	RefSeq	CDS	84290	84646	.	+	0	ID=cds73;Parent=gene107;Dbxref=Genbank:NP_687110.1,GeneID:1012824;Name=NP_687110.1;Note=binds 5S rRNA along with protein L5 and L25;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=NP_687110.1;transl_table=11
NC_004116.1	RefSeq	gene	84665	85159	.	+	.	ID=gene108;Dbxref=GeneID:1012825;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=SAG0075
NC_004116.1	RefSeq	CDS	84665	85159	.	+	0	ID=cds74;Parent=gene108;Dbxref=Genbank:NP_687111.1,GeneID:1012825;Name=NP_687111.1;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=NP_687111.1;transl_table=11
NC_004116.1	RefSeq	gene	85174	85353	.	+	.	ID=gene109;Dbxref=GeneID:1012826;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SAG0076
NC_004116.1	RefSeq	CDS	85174	85353	.	+	0	ID=cds75;Parent=gene109;Dbxref=Genbank:NP_687112.1,GeneID:1012826;Name=NP_687112.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=NP_687112.1;transl_table=11
NC_004116.1	RefSeq	gene	85478	85918	.	+	.	ID=gene110;Dbxref=GeneID:1012827;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=SAG0077
NC_004116.1	RefSeq	CDS	85478	85918	.	+	0	ID=cds76;Parent=gene110;Dbxref=Genbank:NP_687113.1,GeneID:1012827;Name=NP_687113.1;Note=late assembly protein;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=NP_687113.1;transl_table=11
NC_004116.1	RefSeq	gene	85939	87243	.	+	.	ID=gene111;Dbxref=GeneID:1012828;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SAG0078
NC_004116.1	RefSeq	CDS	85939	87243	.	+	0	ID=cds77;Parent=gene111;Dbxref=Genbank:NP_687114.1,GeneID:1012828;Name=NP_687114.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=NP_687114.1;transl_table=11
NC_004116.1	RefSeq	gene	87338	87976	.	+	.	ID=gene112;Dbxref=GeneID:1012829;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SAG0079
NC_004116.1	RefSeq	CDS	87338	87976	.	+	0	ID=cds78;Parent=gene112;Dbxref=Genbank:NP_687115.1,GeneID:1012829;Name=NP_687115.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=NP_687115.1;transl_table=11
NC_004116.1	RefSeq	gene	88092	88310	.	+	.	ID=gene113;Dbxref=GeneID:1012830;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=SAG0080
NC_004116.1	RefSeq	CDS	88092	88310	.	+	0	ID=cds79;Parent=gene113;Dbxref=Genbank:NP_687116.1,GeneID:1012830;Name=NP_687116.1;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=NP_687116.1;transl_table=11
NC_004116.1	RefSeq	gene	88336	88452	.	+	.	ID=gene114;Dbxref=GeneID:1012831;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=SAG0081
NC_004116.1	RefSeq	CDS	88336	88452	.	+	0	ID=cds80;Parent=gene114;Dbxref=Genbank:NP_687117.1,GeneID:1012831;Name=NP_687117.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=NP_687117.1;transl_table=11
NC_004116.1	RefSeq	gene	88470	88835	.	+	.	ID=gene115;Dbxref=GeneID:1012832;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=SAG0082
NC_004116.1	RefSeq	CDS	88470	88835	.	+	0	ID=cds81;Parent=gene115;Dbxref=Genbank:NP_687118.1,GeneID:1012832;Name=NP_687118.1;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=NP_687118.1;transl_table=11
NC_004116.1	RefSeq	gene	88853	89236	.	+	.	ID=gene116;Dbxref=GeneID:1012833;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=SAG0083
NC_004116.1	RefSeq	CDS	88853	89236	.	+	0	ID=cds82;Parent=gene116;Dbxref=Genbank:NP_687119.2,GeneID:1012833;Name=NP_687119.2;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=NP_687119.2;transl_table=11
NC_004116.1	RefSeq	gene	89286	90224	.	+	.	ID=gene117;Dbxref=GeneID:1012834;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=SAG0084
NC_004116.1	RefSeq	CDS	89286	90224	.	+	0	ID=cds83;Parent=gene117;Dbxref=Genbank:NP_687120.1,GeneID:1012834;Name=NP_687120.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase subunit alpha;protein_id=NP_687120.1;transl_table=11
NC_004116.1	RefSeq	gene	90239	90625	.	+	.	ID=gene118;Dbxref=GeneID:1012835;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SAG0085
NC_004116.1	RefSeq	CDS	90239	90625	.	+	0	ID=cds84;Parent=gene118;Dbxref=Genbank:NP_687121.1,GeneID:1012835;Name=NP_687121.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=NP_687121.1;transl_table=11
NC_004116.1	RefSeq	gene	91212	92762	.	+	.	ID=gene119;Dbxref=GeneID:1012836;Name=Sa16SC;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SC
NC_004116.1	RefSeq	rRNA	91212	92762	.	+	.	ID=rna34;Parent=gene119;Dbxref=GeneID:1012836;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	91212	92762	.	+	.	ID=id35;Parent=rna34;Dbxref=GeneID:1012836;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	92815	92887	.	+	.	ID=gene120;Dbxref=GeneID:1012837;Name=tRNA-Ala-7;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-7
NC_004116.1	RefSeq	tRNA	92815	92887	.	+	.	ID=rna35;Parent=gene120;Dbxref=GeneID:1012837;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	92815	92887	.	+	.	ID=id36;Parent=rna35;Dbxref=GeneID:1012837;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	93042	95944	.	+	.	ID=gene121;Dbxref=GeneID:1012838;Name=Sa23SC;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SC
NC_004116.1	RefSeq	rRNA	93042	95944	.	+	.	ID=rna36;Parent=gene121;Dbxref=GeneID:1012838;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	93042	95944	.	+	.	ID=id37;Parent=rna36;Dbxref=GeneID:1012838;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	96018	96134	.	+	.	ID=gene122;Dbxref=GeneID:5228958;Name=SAG_r03;gbkey=Gene;gene_biotype=rRNA;locus_tag=SAG_r03
NC_004116.1	RefSeq	rRNA	96018	96134	.	+	.	ID=rna37;Parent=gene122;Dbxref=GeneID:5228958;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	96018	96134	.	+	.	ID=id38;Parent=rna37;Dbxref=GeneID:5228958;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	96138	96210	.	+	.	ID=gene123;Dbxref=GeneID:1012839;Name=tRNA-Val-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Val-5
NC_004116.1	RefSeq	tRNA	96138	96210	.	+	.	ID=rna38;Parent=gene123;Dbxref=GeneID:1012839;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	exon	96138	96210	.	+	.	ID=id39;Parent=rna38;Dbxref=GeneID:1012839;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	gene	96213	96285	.	+	.	ID=gene124;Dbxref=GeneID:1012840;Name=tRNA-Asp-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Asp-3
NC_004116.1	RefSeq	tRNA	96213	96285	.	+	.	ID=rna39;Parent=gene124;Dbxref=GeneID:1012840;gbkey=tRNA;product=tRNA-Asp
NC_004116.1	RefSeq	exon	96213	96285	.	+	.	ID=id40;Parent=rna39;Dbxref=GeneID:1012840;gbkey=tRNA;product=tRNA-Asp
NC_004116.1	RefSeq	gene	96288	96360	.	+	.	ID=gene125;Dbxref=GeneID:1012841;Name=tRNA-Lys-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Lys-4
NC_004116.1	RefSeq	tRNA	96288	96360	.	+	.	ID=rna40;Parent=gene125;Dbxref=GeneID:1012841;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	exon	96288	96360	.	+	.	ID=id41;Parent=rna40;Dbxref=GeneID:1012841;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	gene	96370	96451	.	+	.	ID=gene126;Dbxref=GeneID:1012842;Name=tRNA-Leu-6;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-6
NC_004116.1	RefSeq	tRNA	96370	96451	.	+	.	ID=rna41;Parent=gene126;Dbxref=GeneID:1012842;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	96370	96451	.	+	.	ID=id42;Parent=rna41;Dbxref=GeneID:1012842;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	96462	96534	.	+	.	ID=gene127;Dbxref=GeneID:1012843;Name=tRNA-Thr-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Thr-4
NC_004116.1	RefSeq	tRNA	96462	96534	.	+	.	ID=rna42;Parent=gene127;Dbxref=GeneID:1012843;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	exon	96462	96534	.	+	.	ID=id43;Parent=rna42;Dbxref=GeneID:1012843;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	gene	96563	96639	.	+	.	ID=gene128;Dbxref=GeneID:1012844;Name=tRNA-Ile-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ile-4
NC_004116.1	RefSeq	tRNA	96563	96639	.	+	.	ID=rna43;Parent=gene128;Dbxref=GeneID:1012844;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	exon	96563	96639	.	+	.	ID=id44;Parent=rna43;Dbxref=GeneID:1012844;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	gene	96647	96718	.	+	.	ID=gene129;Dbxref=GeneID:1012845;Name=tRNA-Glu-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Glu-5
NC_004116.1	RefSeq	tRNA	96647	96718	.	+	.	ID=rna44;Parent=gene129;Dbxref=GeneID:1012845;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	exon	96647	96718	.	+	.	ID=id45;Parent=rna44;Dbxref=GeneID:1012845;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	gene	96732	96821	.	+	.	ID=gene130;Dbxref=GeneID:1012846;Name=tRNA-Ser-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ser-5
NC_004116.1	RefSeq	tRNA	96732	96821	.	+	.	ID=rna45;Parent=gene130;Dbxref=GeneID:1012846;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	exon	96732	96821	.	+	.	ID=id46;Parent=rna45;Dbxref=GeneID:1012846;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	gene	96832	96905	.	+	.	ID=gene131;Dbxref=GeneID:1012847;Name=tRNA-Met-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Met-5
NC_004116.1	RefSeq	tRNA	96832	96905	.	+	.	ID=rna46;Parent=gene131;Dbxref=GeneID:1012847;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	exon	96832	96905	.	+	.	ID=id47;Parent=rna46;Dbxref=GeneID:1012847;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	gene	96908	96980	.	+	.	ID=gene132;Dbxref=GeneID:1012848;Name=tRNA-Phe-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Phe-3
NC_004116.1	RefSeq	tRNA	96908	96980	.	+	.	ID=rna47;Parent=gene132;Dbxref=GeneID:1012848;gbkey=tRNA;product=tRNA-Phe
NC_004116.1	RefSeq	exon	96908	96980	.	+	.	ID=id48;Parent=rna47;Dbxref=GeneID:1012848;gbkey=tRNA;product=tRNA-Phe
NC_004116.1	RefSeq	gene	96992	97072	.	+	.	ID=gene133;Dbxref=GeneID:1012849;Name=tRNA-Tyr-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Tyr-3
NC_004116.1	RefSeq	tRNA	96992	97072	.	+	.	ID=rna48;Parent=gene133;Dbxref=GeneID:1012849;gbkey=tRNA;product=tRNA-Tyr
NC_004116.1	RefSeq	exon	96992	97072	.	+	.	ID=id49;Parent=rna48;Dbxref=GeneID:1012849;gbkey=tRNA;product=tRNA-Tyr
NC_004116.1	RefSeq	gene	97079	97149	.	+	.	ID=gene134;Dbxref=GeneID:1012850;Name=tRNA-Trp-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Trp-2
NC_004116.1	RefSeq	tRNA	97079	97149	.	+	.	ID=rna49;Parent=gene134;Dbxref=GeneID:1012850;gbkey=tRNA;product=tRNA-Trp
NC_004116.1	RefSeq	exon	97079	97149	.	+	.	ID=id50;Parent=rna49;Dbxref=GeneID:1012850;gbkey=tRNA;product=tRNA-Trp
NC_004116.1	RefSeq	gene	97164	97236	.	+	.	ID=gene135;Dbxref=GeneID:1012851;Name=tRNA-His-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-His-2
NC_004116.1	RefSeq	tRNA	97164	97236	.	+	.	ID=rna50;Parent=gene135;Dbxref=GeneID:1012851;gbkey=tRNA;product=tRNA-His
NC_004116.1	RefSeq	exon	97164	97236	.	+	.	ID=id51;Parent=rna50;Dbxref=GeneID:1012851;gbkey=tRNA;product=tRNA-His
NC_004116.1	RefSeq	gene	97243	97314	.	+	.	ID=gene136;Dbxref=GeneID:1012852;Name=tRNA-Gln-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gln-4
NC_004116.1	RefSeq	tRNA	97243	97314	.	+	.	ID=rna51;Parent=gene136;Dbxref=GeneID:1012852;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	exon	97243	97314	.	+	.	ID=id52;Parent=rna51;Dbxref=GeneID:1012852;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	gene	97325	97408	.	+	.	ID=gene137;Dbxref=GeneID:1012853;Name=tRNA-Leu-7;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-7
NC_004116.1	RefSeq	tRNA	97325	97408	.	+	.	ID=rna52;Parent=gene137;Dbxref=GeneID:1012853;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	97325	97408	.	+	.	ID=id53;Parent=rna52;Dbxref=GeneID:1012853;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	97819	98076	.	+	.	ID=gene138;Dbxref=GeneID:1012854;Name=SAG0086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0086
NC_004116.1	RefSeq	CDS	97819	98076	.	+	0	ID=cds85;Parent=gene138;Dbxref=Genbank:NP_687122.1,GeneID:1012854;Name=NP_687122.1;gbkey=CDS;product=lipoprotein;protein_id=NP_687122.1;transl_table=11
NC_004116.1	RefSeq	gene	98067	98246	.	+	.	ID=gene139;Dbxref=GeneID:1012855;Name=SAG0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0087
NC_004116.1	RefSeq	CDS	98067	98246	.	+	0	ID=cds86;Parent=gene139;Dbxref=Genbank:NP_687123.1,GeneID:1012855;Name=NP_687123.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687123.1;transl_table=11
NC_004116.1	RefSeq	gene	98316	98486	.	+	.	ID=gene140;Dbxref=GeneID:1012856;Name=SAG0088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0088
NC_004116.1	RefSeq	CDS	98316	98486	.	+	0	ID=cds87;Parent=gene140;Dbxref=Genbank:NP_687124.1,GeneID:1012856;Name=NP_687124.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687124.1;transl_table=11
NC_004116.1	RefSeq	gene	99401	99952	.	+	.	ID=gene141;Dbxref=GeneID:1012857;Name=SAG0089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0089
NC_004116.1	RefSeq	CDS	99401	99952	.	+	0	ID=cds88;Parent=gene141;Dbxref=Genbank:NP_687125.1,GeneID:1012857;Name=NP_687125.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687125.1;transl_table=11
NC_004116.1	RefSeq	gene	100172	100591	.	+	.	ID=gene142;Dbxref=GeneID:1012858;Name=SAG0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0090
NC_004116.1	RefSeq	CDS	100172	100591	.	+	0	ID=cds89;Parent=gene142;Dbxref=Genbank:NP_687126.1,GeneID:1012858;Name=NP_687126.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687126.1;transl_table=11
NC_004116.1	RefSeq	gene	100836	101270	.	+	.	ID=gene143;Dbxref=GeneID:1012859;Name=SAG0091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0091
NC_004116.1	RefSeq	CDS	100836	101270	.	+	0	ID=cds90;Parent=gene143;Dbxref=Genbank:NP_687127.1,GeneID:1012859;Name=NP_687127.1;Note=similar to OMNI:SP0014%3B identified by sequence similarity;gbkey=CDS;product=ComX1 family transcriptional regulator;protein_id=NP_687127.1;transl_table=11
NC_004116.1	RefSeq	gene	101392	102084	.	+	.	ID=gene144;Dbxref=GeneID:1012860;Name=SAG0092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0092
NC_004116.1	RefSeq	CDS	101392	102084	.	+	0	ID=cds91;Parent=gene144;Dbxref=Genbank:NP_687128.1,GeneID:1012860;Name=NP_687128.1;Note=identified by match to PFAM protein family HMM PF00300;gbkey=CDS;product=phosphoglycerate mutase family protein;protein_id=NP_687128.1;transl_table=11
NC_004116.1	RefSeq	gene	102081	102833	.	+	.	ID=gene145;Dbxref=GeneID:1012861;Name=SAG0093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0093
NC_004116.1	RefSeq	CDS	102081	102833	.	+	0	ID=cds92;Parent=gene145;Dbxref=Genbank:NP_687129.1,GeneID:1012861;Name=NP_687129.1;Note=identified by match to PFAM protein family HMM PF02557;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_687129.1;transl_table=11
NC_004116.1	RefSeq	gene	102830	103405	.	+	.	ID=gene146;Dbxref=GeneID:1012862;Name=SAG0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0094
NC_004116.1	RefSeq	CDS	102830	103405	.	+	0	ID=cds93;Parent=gene146;Dbxref=Genbank:NP_687130.1,GeneID:1012862;Name=NP_687130.1;Note=identified by match to PFAM protein family HMM PF01832;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=NP_687130.1;transl_table=11
NC_004116.1	RefSeq	gene	103548	104582	.	+	.	ID=gene147;Dbxref=GeneID:1012863;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=SAG0095
NC_004116.1	RefSeq	CDS	103548	104582	.	+	0	ID=cds94;Parent=gene147;Dbxref=Genbank:NP_687131.1,GeneID:1012863;Name=NP_687131.1;Note=Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons;gbkey=CDS;gene=hrcA;product=heat-inducible transcription repressor;protein_id=NP_687131.1;transl_table=11
NC_004116.1	RefSeq	gene	104585	105157	.	+	.	ID=gene148;Dbxref=GeneID:1012864;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=SAG0096
NC_004116.1	RefSeq	CDS	104585	105157	.	+	0	ID=cds95;Parent=gene148;Dbxref=Genbank:NP_687132.1,GeneID:1012864;Name=NP_687132.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;gene=grpE;product=heat shock protein GrpE;protein_id=NP_687132.1;transl_table=11
NC_004116.1	RefSeq	gene	105338	107167	.	+	.	ID=gene149;Dbxref=GeneID:1012865;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SAG0097
NC_004116.1	RefSeq	CDS	105338	107167	.	+	0	ID=cds96;Parent=gene149;Dbxref=Genbank:NP_687133.1,GeneID:1012865;Name=NP_687133.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=NP_687133.1;transl_table=11
NC_004116.1	RefSeq	gene	107456	108595	.	+	.	ID=gene150;Dbxref=GeneID:1012866;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=SAG0098
NC_004116.1	RefSeq	CDS	107456	108595	.	+	0	ID=cds97;Parent=gene150;Dbxref=Genbank:NP_687134.1,GeneID:1012866;Name=NP_687134.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;gene=dnaJ;product=molecular chaperone DnaJ;protein_id=NP_687134.1;transl_table=11
NC_004116.1	RefSeq	gene	108709	109956	.	+	.	ID=gene151;Dbxref=GeneID:1012867;Name=SAG0099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0099
NC_004116.1	RefSeq	CDS	108709	109956	.	+	0	ID=cds98;Parent=gene151;Dbxref=Genbank:NP_687135.1,GeneID:1012867;Name=NP_687135.1;Note=identified by match to PFAM protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_687135.1;transl_table=11
NC_004116.1	RefSeq	gene	110027	110803	.	+	.	ID=gene152;Dbxref=GeneID:1012868;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=SAG0100
NC_004116.1	RefSeq	CDS	110027	110803	.	+	0	ID=cds99;Parent=gene152;Dbxref=Genbank:NP_687136.1,GeneID:1012868;Name=NP_687136.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=NP_687136.1;transl_table=11
NC_004116.1	RefSeq	gene	110766	111524	.	+	.	ID=gene153;Dbxref=GeneID:1012869;Name=SAG0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0101
NC_004116.1	RefSeq	CDS	110766	111524	.	+	0	ID=cds100;Parent=gene153;Dbxref=Genbank:NP_687137.1,GeneID:1012869;Name=NP_687137.1;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;gbkey=CDS;product=phosphomethylpyrimidine kinase;protein_id=NP_687137.1;transl_table=11
NC_004116.1	RefSeq	gene	111534	111998	.	+	.	ID=gene154;Dbxref=GeneID:1012870;Name=SAG0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0102
NC_004116.1	RefSeq	CDS	111534	111998	.	+	0	ID=cds101;Parent=gene154;Dbxref=Genbank:NP_687138.1,GeneID:1012870;Name=NP_687138.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687138.1;transl_table=11
NC_004116.1	RefSeq	gene	111995	112564	.	+	.	ID=gene155;Dbxref=GeneID:1012871;Name=SAG0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0103
NC_004116.1	RefSeq	CDS	111995	112564	.	+	0	ID=cds102;Parent=gene155;Dbxref=Genbank:NP_687139.1,GeneID:1012871;Name=NP_687139.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687139.1;transl_table=11
NC_004116.1	RefSeq	gene	112601	113443	.	-	.	ID=gene156;Dbxref=GeneID:1012872;Name=SAG0104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0104
NC_004116.1	RefSeq	CDS	112601	113443	.	-	0	ID=cds103;Parent=gene156;Dbxref=Genbank:NP_687140.1,GeneID:1012872;Name=NP_687140.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687140.1;transl_table=11
NC_004116.1	RefSeq	gene	113600	114883	.	+	.	ID=gene157;Dbxref=GeneID:1012873;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=SAG0105
NC_004116.1	RefSeq	CDS	113600	114883	.	+	0	ID=cds104;Parent=gene157;Dbxref=Genbank:NP_687141.1,GeneID:1012873;Name=NP_687141.1;Note=Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;gbkey=CDS;gene=tig;product=trigger factor;protein_id=NP_687141.1;transl_table=11
NC_004116.1	RefSeq	gene	115072	115647	.	+	.	ID=gene158;Dbxref=GeneID:1012874;Name=SAG0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0106
NC_004116.1	RefSeq	CDS	115072	115647	.	+	0	ID=cds105;Parent=gene158;Dbxref=Genbank:NP_687142.1,GeneID:1012874;Name=NP_687142.1;Note=participates in both the initiation and recycling phases of transcription%3B in the presence of the delta subunit%2C RNAP displays an increased specificity of transcription%2C a decreased affinity for nucleic acids%2C and an increased efficiency of RNA synthesis because of enhanced recycling;gbkey=CDS;product=DNA-directed RNA polymerase subunit delta;protein_id=NP_687142.1;transl_table=11
NC_004116.1	RefSeq	gene	115920	117524	.	+	.	ID=gene159;Dbxref=GeneID:1012875;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SAG0107
NC_004116.1	RefSeq	CDS	115920	117524	.	+	0	ID=cds106;Parent=gene159;Dbxref=Genbank:NP_687143.1,GeneID:1012875;Name=NP_687143.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=NP_687143.1;transl_table=11
NC_004116.1	RefSeq	gene	117633	118559	.	+	.	ID=gene160;Dbxref=GeneID:1012876;Name=SAG0108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0108
NC_004116.1	RefSeq	CDS	117633	118559	.	+	0	ID=cds107;Parent=gene160;Dbxref=Genbank:NP_687144.1,GeneID:1012876;Name=NP_687144.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687144.1;transl_table=11
NC_004116.1	RefSeq	gene	118606	118691	.	+	.	ID=gene161;Dbxref=GeneID:1012877;Name=tRNA-Leu-8;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-8
NC_004116.1	RefSeq	tRNA	118606	118691	.	+	.	ID=rna53;Parent=gene161;Dbxref=GeneID:1012877;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	118606	118691	.	+	.	ID=id54;Parent=rna53;Dbxref=GeneID:1012877;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	118754	119200	.	+	.	ID=gene162;Dbxref=GeneID:1012878;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=SAG0109
NC_004116.1	RefSeq	CDS	118754	119200	.	+	0	ID=cds108;Parent=gene162;Dbxref=Genbank:NP_687145.1,GeneID:1012878;Name=NP_687145.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;gene=dut;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=NP_687145.1;transl_table=11
NC_004116.1	RefSeq	gene	119362	120726	.	+	.	ID=gene163;Dbxref=GeneID:1012879;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=SAG0110
NC_004116.1	RefSeq	CDS	119362	120726	.	+	0	ID=cds109;Parent=gene163;Dbxref=Genbank:NP_687146.1,GeneID:1012879;Name=NP_687146.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;gene=radA;product=DNA repair protein RadA;protein_id=NP_687146.1;transl_table=11
NC_004116.1	RefSeq	gene	120862	121359	.	+	.	ID=gene164;Dbxref=GeneID:1012880;Name=SAG0111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0111
NC_004116.1	RefSeq	CDS	120862	121359	.	+	0	ID=cds110;Parent=gene164;Dbxref=Genbank:NP_687147.1,GeneID:1012880;Name=NP_687147.1;gbkey=CDS;product=carbonic anhydrase-like protein;protein_id=NP_687147.1;transl_table=11
NC_004116.1	RefSeq	gene	121513	122832	.	+	.	ID=gene165;Dbxref=GeneID:1012881;Name=SAG0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0112
NC_004116.1	RefSeq	CDS	121513	122832	.	+	0	ID=cds111;Parent=gene165;Dbxref=Genbank:NP_687148.1,GeneID:1012881;Name=NP_687148.1;Note=Involved in disulfide oxidoreductase activity and electron transport;gbkey=CDS;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=NP_687148.1;transl_table=11
NC_004116.1	RefSeq	gene	123041	124495	.	+	.	ID=gene166;Dbxref=GeneID:1012882;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SAG0113
NC_004116.1	RefSeq	CDS	123041	124495	.	+	0	ID=cds112;Parent=gene166;Dbxref=Genbank:NP_687149.1,GeneID:1012882;Name=NP_687149.1;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=NP_687149.1;transl_table=11
NC_004116.1	RefSeq	gene	124535	125503	.	-	.	ID=gene167;Dbxref=GeneID:1012883;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=SAG0114
NC_004116.1	RefSeq	CDS	124535	125503	.	-	0	ID=cds113;Parent=gene167;Dbxref=Genbank:NP_687150.1,GeneID:1012883;Name=NP_687150.1;Note=identified by match to PFAM protein family HMM PF00532;gbkey=CDS;gene=rbsB;product=ribose ABC transporter periplasmic D-ribose-binding protein;protein_id=NP_687150.1;transl_table=11
NC_004116.1	RefSeq	gene	125556	126488	.	-	.	ID=gene168;Dbxref=GeneID:1012884;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=SAG0115
NC_004116.1	RefSeq	CDS	125556	126488	.	-	0	ID=cds114;Parent=gene168;Dbxref=Genbank:NP_687151.1,GeneID:1012884;Name=NP_687151.1;Note=identified by match to PFAM protein family HMM PF02653;gbkey=CDS;gene=rbsC;product=ribose ABC transporter permease;protein_id=NP_687151.1;transl_table=11
NC_004116.1	RefSeq	gene	126499	127977	.	-	.	ID=gene169;Dbxref=GeneID:1012885;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=SAG0116
NC_004116.1	RefSeq	CDS	126499	127977	.	-	0	ID=cds115;Parent=gene169;Dbxref=Genbank:NP_687152.1,GeneID:1012885;Name=NP_687152.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=rbsA;product=ribose ABC transporter ATP-binding protein;protein_id=NP_687152.1;transl_table=11
NC_004116.1	RefSeq	gene	127993	128391	.	-	.	ID=gene170;Dbxref=GeneID:1012886;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=SAG0117
NC_004116.1	RefSeq	CDS	127993	128391	.	-	0	ID=cds116;Parent=gene170;Dbxref=Genbank:NP_687153.1,GeneID:1012886;Name=NP_687153.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;gene=rbsD;product=D-ribose pyranase;protein_id=NP_687153.1;transl_table=11
NC_004116.1	RefSeq	gene	128366	129277	.	-	.	ID=gene171;Dbxref=GeneID:1012887;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=SAG0118
NC_004116.1	RefSeq	CDS	128366	129277	.	-	0	ID=cds117;Parent=gene171;Dbxref=Genbank:NP_687154.1,GeneID:1012887;Name=NP_687154.1;Note=identified by match to PFAM protein family HMM PF00294;gbkey=CDS;gene=rbsK;product=ribokinase;protein_id=NP_687154.1;transl_table=11
NC_004116.1	RefSeq	gene	129270	130256	.	-	.	ID=gene172;Dbxref=GeneID:1012888;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=SAG0119
NC_004116.1	RefSeq	CDS	129270	130256	.	-	0	ID=cds118;Parent=gene172;Dbxref=Genbank:NP_687155.1,GeneID:1012888;Name=NP_687155.1;Note=identified by match to PFAM protein family HMM PF00356;gbkey=CDS;gene=rbsR;product=ribose operon repressor RbsR;protein_id=NP_687155.1;transl_table=11
NC_004116.1	RefSeq	gene	130314	130412	.	-	.	ID=gene173;Dbxref=GeneID:1012889;Name=SAG0120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0120
NC_004116.1	RefSeq	CDS	130314	130412	.	-	0	ID=cds119;Parent=gene173;Dbxref=Genbank:NP_687156.1,GeneID:1012889;Name=NP_687156.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687156.1;transl_table=11
NC_004116.1	RefSeq	gene	130438	131526	.	+	.	ID=gene174;Dbxref=GeneID:1012890;Name=SAG0121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0121
NC_004116.1	RefSeq	CDS	130438	131526	.	+	0	ID=cds120;Parent=gene174;Dbxref=Genbank:NP_687157.1,GeneID:1012890;Name=NP_687157.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;product=permease;protein_id=NP_687157.1;transl_table=11
NC_004116.1	RefSeq	gene	131526	132212	.	+	.	ID=gene175;Dbxref=GeneID:1012891;Name=SAG0122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0122
NC_004116.1	RefSeq	CDS	131526	132212	.	+	0	ID=cds121;Parent=gene175;Dbxref=Genbank:NP_687158.1,GeneID:1012891;Name=NP_687158.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687158.1;transl_table=11
NC_004116.1	RefSeq	gene	132243	132914	.	+	.	ID=gene176;Dbxref=GeneID:1012892;Name=SAG0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0123
NC_004116.1	RefSeq	CDS	132243	132914	.	+	0	ID=cds122;Parent=gene176;Dbxref=Genbank:NP_687159.1,GeneID:1012892;Name=NP_687159.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_687159.1;transl_table=11
NC_004116.1	RefSeq	gene	132907	133977	.	+	.	ID=gene177;Dbxref=GeneID:1012893;Name=SAG0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0124
NC_004116.1	RefSeq	CDS	132907	133977	.	+	0	ID=cds123;Parent=gene177;Dbxref=Genbank:NP_687160.1,GeneID:1012893;Name=NP_687160.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_687160.1;transl_table=11
NC_004116.1	RefSeq	gene	134131	135321	.	+	.	ID=gene178;Dbxref=GeneID:1012894;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=SAG0125
NC_004116.1	RefSeq	CDS	134131	135321	.	+	0	ID=cds124;Parent=gene178;Dbxref=Genbank:NP_687161.1,GeneID:1012894;Name=NP_687161.1;Note=catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis%2C AMP-forming;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=NP_687161.1;transl_table=11
NC_004116.1	RefSeq	gene	135340	136728	.	+	.	ID=gene179;Dbxref=GeneID:1012895;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=SAG0126
NC_004116.1	RefSeq	CDS	135340	136728	.	+	0	ID=cds125;Parent=gene179;Dbxref=Genbank:NP_687162.1,GeneID:1012895;Name=NP_687162.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=NP_687162.1;transl_table=11
NC_004116.1	RefSeq	gene	136869	137750	.	+	.	ID=gene180;Dbxref=GeneID:1012896;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=SAG0127
NC_004116.1	RefSeq	CDS	136869	137750	.	+	0	ID=cds126;Parent=gene180;Dbxref=Genbank:NP_687163.1,GeneID:1012896;Name=NP_687163.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;gene=fba;product=fructose-bisphosphate aldolase;protein_id=NP_687163.1;transl_table=11
NC_004116.1	RefSeq	gene	137834	138751	.	-	.	ID=gene181;Dbxref=GeneID:1012897;Name=SAG0128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0128
NC_004116.1	RefSeq	CDS	137834	138751	.	-	0	ID=cds127;Parent=gene181;Dbxref=Genbank:NP_687164.1,GeneID:1012897;Name=NP_687164.1;Note=identified by match to PFAM protein family HMM PF00056;gbkey=CDS;product=L-2-hydroxyisocaproate dehydrogenase;protein_id=NP_687164.1;transl_table=11
NC_004116.1	RefSeq	gene	138990	139178	.	+	.	ID=gene182;Dbxref=GeneID:1012898;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SAG0129
NC_004116.1	RefSeq	CDS	138990	139178	.	+	0	ID=cds128;Parent=gene182;Dbxref=Genbank:NP_687165.1,GeneID:1012898;Name=NP_687165.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=NP_687165.1;transl_table=11
NC_004116.1	RefSeq	gene	139310	139675	.	+	.	ID=gene183;Dbxref=GeneID:1012899;Name=SAG0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0130
NC_004116.1	RefSeq	CDS	139310	139675	.	+	0	ID=cds129;Parent=gene183;Dbxref=Genbank:NP_687166.1,GeneID:1012899;Name=NP_687166.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687166.1;transl_table=11
NC_004116.1	RefSeq	gene	139708	141339	.	+	.	ID=gene184;Dbxref=GeneID:1012900;Name=SAG0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0131
NC_004116.1	RefSeq	CDS	139708	141339	.	+	0	ID=cds130;Parent=gene184;Dbxref=Genbank:NP_687167.1,GeneID:1012900;Name=NP_687167.1;Note=identified by match to PFAM protein family HMM PF02734;gbkey=CDS;product=DAK2 domain-containing protein;protein_id=NP_687167.1;transl_table=11
NC_004116.1	RefSeq	gene	141487	142371	.	+	.	ID=gene185;Dbxref=GeneID:1012901;Name=SAG0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0132
NC_004116.1	RefSeq	CDS	141487	142371	.	+	0	ID=cds131;Parent=gene185;Dbxref=Genbank:NP_687168.1,GeneID:1012901;Name=NP_687168.1;Note=identified by match to PFAM protein family HMM PF01145%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687168.1;transl_table=11
NC_004116.1	RefSeq	gene	142463	142579	.	-	.	ID=gene186;Dbxref=GeneID:1012902;Name=SAG0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0133
NC_004116.1	RefSeq	CDS	142463	142579	.	-	0	ID=cds132;Parent=gene186;Dbxref=Genbank:NP_687169.1,GeneID:1012902;Name=NP_687169.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687169.1;transl_table=11
NC_004116.1	RefSeq	gene	142947	143237	.	-	.	ID=gene187;Dbxref=GeneID:1012903;Name=SAG0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0134
NC_004116.1	RefSeq	CDS	142947	143237	.	-	0	ID=cds133;Parent=gene187;Dbxref=Genbank:NP_687170.1,GeneID:1012903;Name=NP_687170.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687170.1;transl_table=11
NC_004116.1	RefSeq	gene	143579	144319	.	-	.	ID=gene188;Dbxref=GeneID:1012904;Name=SAG0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0135
NC_004116.1	RefSeq	CDS	143579	144319	.	-	0	ID=cds134;Parent=gene188;Dbxref=Genbank:NP_687171.1,GeneID:1012904;Name=NP_687171.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_687171.1;transl_table=11
NC_004116.1	RefSeq	gene	144329	145879	.	-	.	ID=gene189;Dbxref=GeneID:1012905;Name=SAG0136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0136
NC_004116.1	RefSeq	CDS	144329	145879	.	-	0	ID=cds135;Parent=gene189;Dbxref=Genbank:NP_687172.1,GeneID:1012905;Name=NP_687172.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter amino acid-binding protein/permease;protein_id=NP_687172.1;transl_table=11
NC_004116.1	RefSeq	gene	146015	147898	.	+	.	ID=gene190;Dbxref=GeneID:1012906;Name=SAG0137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0137
NC_004116.1	RefSeq	CDS	146015	147898	.	+	0	ID=cds136;Parent=gene190;Dbxref=Genbank:NP_687173.1,GeneID:1012906;Name=NP_687173.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687173.1;transl_table=11
NC_004116.1	RefSeq	gene	147944	148783	.	+	.	ID=gene191;Dbxref=GeneID:1012907;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;locus_tag=SAG0138
NC_004116.1	RefSeq	CDS	147944	148783	.	+	0	ID=cds137;Parent=gene191;Dbxref=Genbank:NP_687174.1,GeneID:1012907;Name=NP_687174.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;gene=uppP;product=undecaprenyl pyrophosphate phosphatase;protein_id=NP_687174.1;transl_table=11
NC_004116.1	RefSeq	gene	148903	149658	.	+	.	ID=gene192;Dbxref=GeneID:1012908;Name=SAG0139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0139
NC_004116.1	RefSeq	CDS	148903	149658	.	+	0	ID=cds138;Parent=gene192;Dbxref=Genbank:NP_687175.1,GeneID:1012908;Name=NP_687175.1;Note=enables recognition and targeting of proteins for proteolysis%2C involved in negative regulation of competence;gbkey=CDS;product=adaptor protein;protein_id=NP_687175.1;transl_table=11
NC_004116.1	RefSeq	gene	149660	150820	.	+	.	ID=gene193;Dbxref=GeneID:1012909;Name=SAG0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0140
NC_004116.1	RefSeq	CDS	149660	150820	.	+	0	ID=cds139;Parent=gene193;Dbxref=Genbank:NP_687176.1,GeneID:1012909;Name=NP_687176.1;Note=identified by match to PFAM protein family HMM PF00953;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=NP_687176.1;transl_table=11
NC_004116.1	RefSeq	gene	150985	151755	.	+	.	ID=gene194;Dbxref=GeneID:1012910;Name=SAG0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0141
NC_004116.1	RefSeq	CDS	150985	151755	.	+	0	ID=cds140;Parent=gene194;Dbxref=Genbank:NP_687177.1,GeneID:1012910;Name=NP_687177.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687177.1;transl_table=11
NC_004116.1	RefSeq	gene	151792	153054	.	+	.	ID=gene195;Dbxref=GeneID:1012911;Name=SAG0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0142
NC_004116.1	RefSeq	CDS	151792	153054	.	+	0	ID=cds141;Parent=gene195;Dbxref=Genbank:NP_687178.1,GeneID:1012911;Name=NP_687178.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687178.1;transl_table=11
NC_004116.1	RefSeq	gene	153056	154288	.	+	.	ID=gene196;Dbxref=GeneID:1012912;Name=csdB;gbkey=Gene;gene=csdB;gene_biotype=protein_coding;locus_tag=SAG0143
NC_004116.1	RefSeq	CDS	153056	154288	.	+	0	ID=cds142;Parent=gene196;Dbxref=Genbank:NP_687179.1,GeneID:1012912;Name=NP_687179.1;Note=identified by match to PFAM protein family HMM PF00266;gbkey=CDS;gene=csdB;product=selenocysteine lyase;protein_id=NP_687179.1;transl_table=11
NC_004116.1	RefSeq	gene	154275	154718	.	+	.	ID=gene197;Dbxref=GeneID:1012913;Name=SAG0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0144
NC_004116.1	RefSeq	CDS	154275	154718	.	+	0	ID=cds143;Parent=gene197;Dbxref=Genbank:NP_687180.1,GeneID:1012913;Name=NP_687180.1;Note=identified by match to PFAM protein family HMM PF01592;gbkey=CDS;product=NifU family protein;protein_id=NP_687180.1;transl_table=11
NC_004116.1	RefSeq	gene	154818	156236	.	+	.	ID=gene198;Dbxref=GeneID:1012914;Name=SAG0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0145
NC_004116.1	RefSeq	CDS	154818	156236	.	+	0	ID=cds144;Parent=gene198;Dbxref=Genbank:NP_687181.1,GeneID:1012914;Name=NP_687181.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687181.1;transl_table=11
NC_004116.1	RefSeq	gene	156308	157495	.	-	.	ID=gene199;Dbxref=GeneID:1012915;Name=SAG0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0146
NC_004116.1	RefSeq	CDS	156308	157495	.	-	0	ID=cds145;Parent=gene199;Dbxref=Genbank:NP_687182.1,GeneID:1012915;Name=NP_687182.1;Note=identified by match to PFAM protein family HMM PF00768;gbkey=CDS;product=penicillin-binding protein 4;protein_id=NP_687182.1;transl_table=11
NC_004116.1	RefSeq	gene	157648	158883	.	-	.	ID=gene200;Dbxref=GeneID:1012916;Name=SAG0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0147
NC_004116.1	RefSeq	CDS	157648	158883	.	-	0	ID=cds146;Parent=gene200;Dbxref=Genbank:NP_687183.1,GeneID:1012916;Name=NP_687183.1;Note=identified by match to PFAM protein family HMM PF00768;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_687183.1;transl_table=11
NC_004116.1	RefSeq	gene	159124	160779	.	+	.	ID=gene201;Dbxref=GeneID:1012917;Name=SAG0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0148
NC_004116.1	RefSeq	CDS	159124	160779	.	+	0	ID=cds147;Parent=gene201;Dbxref=Genbank:NP_687184.1,GeneID:1012917;Name=NP_687184.1;Note=identified by match to PFAM protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter substrate-binding protein;protein_id=NP_687184.1;transl_table=11
NC_004116.1	RefSeq	gene	160898	161812	.	+	.	ID=gene202;Dbxref=GeneID:1012918;Name=SAG0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0149
NC_004116.1	RefSeq	CDS	160898	161812	.	+	0	ID=cds148;Parent=gene202;Dbxref=Genbank:NP_687185.1,GeneID:1012918;Name=NP_687185.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=oligopeptide ABC transporter permease;protein_id=NP_687185.1;transl_table=11
NC_004116.1	RefSeq	gene	161822	162853	.	+	.	ID=gene203;Dbxref=GeneID:1012919;Name=SAG0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0150
NC_004116.1	RefSeq	CDS	161822	162853	.	+	0	ID=cds149;Parent=gene203;Dbxref=Genbank:NP_687186.1,GeneID:1012919;Name=NP_687186.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=oligopeptide ABC transporter permease;protein_id=NP_687186.1;transl_table=11
NC_004116.1	RefSeq	gene	162866	163912	.	+	.	ID=gene204;Dbxref=GeneID:1012920;Name=SAG0151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0151
NC_004116.1	RefSeq	CDS	162866	163912	.	+	0	ID=cds150;Parent=gene204;Dbxref=Genbank:NP_687187.1,GeneID:1012920;Name=NP_687187.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_687187.1;transl_table=11
NC_004116.1	RefSeq	gene	163912	164844	.	+	.	ID=gene205;Dbxref=GeneID:1012921;Name=SAG0152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0152
NC_004116.1	RefSeq	CDS	163912	164844	.	+	0	ID=cds151;Parent=gene205;Dbxref=Genbank:NP_687188.1,GeneID:1012921;Name=NP_687188.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=oligopeptide ABC transporter ATP-binding protein;protein_id=NP_687188.1;transl_table=11
NC_004116.1	RefSeq	gene	165241	166791	.	+	.	ID=gene206;Dbxref=GeneID:1012922;Name=Sa16SD;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SD
NC_004116.1	RefSeq	rRNA	165241	166791	.	+	.	ID=rna54;Parent=gene206;Dbxref=GeneID:1012922;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	165241	166791	.	+	.	ID=id55;Parent=rna54;Dbxref=GeneID:1012922;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	166844	166916	.	+	.	ID=gene207;Dbxref=GeneID:1012923;Name=tRNA-Ala-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-1
NC_004116.1	RefSeq	tRNA	166844	166916	.	+	.	ID=rna55;Parent=gene207;Dbxref=GeneID:1012923;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	166844	166916	.	+	.	ID=id56;Parent=rna55;Dbxref=GeneID:1012923;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	167071	169973	.	+	.	ID=gene208;Dbxref=GeneID:1012924;Name=Sa23SD;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SD
NC_004116.1	RefSeq	rRNA	167071	169973	.	+	.	ID=rna56;Parent=gene208;Dbxref=GeneID:1012924;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	167071	169973	.	+	.	ID=id57;Parent=rna56;Dbxref=GeneID:1012924;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	170047	170163	.	+	.	ID=gene209;Dbxref=GeneID:1012925;Name=Sa5SD;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa5SD
NC_004116.1	RefSeq	rRNA	170047	170163	.	+	.	ID=rna57;Parent=gene209;Dbxref=GeneID:1012925;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	170047	170163	.	+	.	ID=id58;Parent=rna57;Dbxref=GeneID:1012925;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	170169	170242	.	+	.	ID=gene210;Dbxref=GeneID:1012926;Name=tRNA-Asn-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Asn-1
NC_004116.1	RefSeq	tRNA	170169	170242	.	+	.	ID=rna58;Parent=gene210;Dbxref=GeneID:1012926;gbkey=tRNA;product=tRNA-Asn
NC_004116.1	RefSeq	exon	170169	170242	.	+	.	ID=id59;Parent=rna58;Dbxref=GeneID:1012926;gbkey=tRNA;product=tRNA-Asn
NC_004116.1	RefSeq	gene	170382	171233	.	+	.	ID=gene211;Dbxref=GeneID:1012927;Name=ipk;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=SAG0153
NC_004116.1	RefSeq	CDS	170382	171233	.	+	0	ID=cds152;Parent=gene211;Dbxref=Genbank:NP_687189.1,GeneID:1012927;Name=NP_687189.1;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;gbkey=CDS;gene=ipk;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=NP_687189.1;transl_table=11
NC_004116.1	RefSeq	gene	171319	171762	.	+	.	ID=gene212;Dbxref=GeneID:1012928;Name=adcR;gbkey=Gene;gene=adcR;gene_biotype=protein_coding;locus_tag=SAG0154
NC_004116.1	RefSeq	CDS	171319	171762	.	+	0	ID=cds153;Parent=gene212;Dbxref=Genbank:NP_687190.1,GeneID:1012928;Name=NP_687190.1;Note=identified by match to PFAM protein family HMM PF01047;gbkey=CDS;gene=adcR;product=adc operon repressor AdcR;protein_id=NP_687190.1;transl_table=11
NC_004116.1	RefSeq	gene	171765	172475	.	+	.	ID=gene213;Dbxref=GeneID:1012929;Name=SAG0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0155
NC_004116.1	RefSeq	CDS	171765	172475	.	+	0	ID=cds154;Parent=gene213;Dbxref=Genbank:NP_687191.1,GeneID:1012929;Name=NP_687191.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=zinc ABC transporter ATP-binding protein;protein_id=NP_687191.1;transl_table=11
NC_004116.1	RefSeq	gene	172465	173277	.	+	.	ID=gene214;Dbxref=GeneID:1012930;Name=SAG0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0156
NC_004116.1	RefSeq	CDS	172465	173277	.	+	0	ID=cds155;Parent=gene214;Dbxref=Genbank:NP_687192.1,GeneID:1012930;Name=NP_687192.1;Note=identified by match to PFAM protein family HMM PF00950;gbkey=CDS;product=zinc ABC transporter permease;protein_id=NP_687192.1;transl_table=11
NC_004116.1	RefSeq	gene	173488	174560	.	-	.	ID=gene215;Dbxref=GeneID:1012931;Name=SAG0157;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:NTL01SPL0534%3B identified by sequence similarity%3B deoxyribonuclease-related protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0157
NC_004116.1	RefSeq	gene	175097	176356	.	-	.	ID=gene216;Dbxref=GeneID:1012932;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=SAG0158
NC_004116.1	RefSeq	CDS	175097	176356	.	-	0	ID=cds156;Parent=gene216;Dbxref=Genbank:NP_687193.1,GeneID:1012932;Name=NP_687193.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=NP_687193.1;transl_table=11
NC_004116.1	RefSeq	gene	176467	178764	.	+	.	ID=gene217;Dbxref=GeneID:1012933;Name=SAG0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0159
NC_004116.1	RefSeq	CDS	176467	178764	.	+	0	ID=cds157;Parent=gene217;Dbxref=Genbank:NP_687194.1,GeneID:1012933;Name=NP_687194.1;Note=identified by match to PFAM protein family HMM PF00905;gbkey=CDS;product=penicillin-binding protein 1B;protein_id=NP_687194.1;transl_table=11
NC_004116.1	RefSeq	gene	179288	182863	.	+	.	ID=gene218;Dbxref=GeneID:1012934;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SAG0160
NC_004116.1	RefSeq	CDS	179288	182863	.	+	0	ID=cds158;Parent=gene218;Dbxref=Genbank:NP_687195.1,GeneID:1012934;Name=NP_687195.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=NP_687195.1;transl_table=11
NC_004116.1	RefSeq	gene	182980	186630	.	+	.	ID=gene219;Dbxref=GeneID:1012935;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=SAG0161
NC_004116.1	RefSeq	CDS	182980	186630	.	+	0	ID=cds159;Parent=gene219;Dbxref=Genbank:NP_687196.1,GeneID:1012935;Name=NP_687196.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase subunit beta';protein_id=NP_687196.1;transl_table=11
NC_004116.1	RefSeq	gene	186744	187109	.	+	.	ID=gene220;Dbxref=GeneID:1012936;Name=SAG0162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0162
NC_004116.1	RefSeq	CDS	186744	187109	.	+	0	ID=cds160;Parent=gene220;Dbxref=Genbank:NP_687197.1,GeneID:1012936;Name=NP_687197.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687197.1;transl_table=11
NC_004116.1	RefSeq	gene	187282	188253	.	+	.	ID=gene221;Dbxref=GeneID:1012937;Name=cglA;gbkey=Gene;gene=cglA;gene_biotype=protein_coding;locus_tag=SAG0163
NC_004116.1	RefSeq	CDS	187282	188253	.	+	0	ID=cds161;Parent=gene221;Dbxref=Genbank:NP_687198.1,GeneID:1012937;Name=NP_687198.1;Note=identified by match to PFAM protein family HMM PF00437;gbkey=CDS;gene=cglA;product=competence protein CglA;protein_id=NP_687198.1;transl_table=11
NC_004116.1	RefSeq	gene	188342	189190	.	+	.	ID=gene222;Dbxref=GeneID:1012938;Name=cglB;gbkey=Gene;gene=cglB;gene_biotype=protein_coding;locus_tag=SAG0164
NC_004116.1	RefSeq	CDS	188342	189190	.	+	0	ID=cds162;Parent=gene222;Dbxref=Genbank:NP_687199.1,GeneID:1012938;Name=NP_687199.1;Note=identified by match to PFAM protein family HMM PF00482;gbkey=CDS;gene=cglB;product=competence protein CglB;protein_id=NP_687199.1;transl_table=11
NC_004116.1	RefSeq	gene	189187	189642	.	+	.	ID=gene223;Dbxref=GeneID:1012939;Name=SAG0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0165
NC_004116.1	RefSeq	CDS	189187	189642	.	+	0	ID=cds163;Parent=gene223;Dbxref=Genbank:NP_687200.1,GeneID:1012939;Name=NP_687200.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687200.1;transl_table=11
NC_004116.1	RefSeq	gene	189620	189991	.	+	.	ID=gene224;Dbxref=GeneID:1012940;Name=SAG0166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0166
NC_004116.1	RefSeq	CDS	189620	189991	.	+	0	ID=cds164;Parent=gene224;Dbxref=Genbank:NP_687201.1,GeneID:1012940;Name=NP_687201.1;Note=similar to OMNI:NTL01SPL0084%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687201.1;transl_table=11
NC_004116.1	RefSeq	gene	190106	191080	.	+	.	ID=gene225;Dbxref=GeneID:1012941;Name=SAG0167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0167
NC_004116.1	RefSeq	CDS	190106	191080	.	+	0	ID=cds165;Parent=gene225;Dbxref=Genbank:NP_687202.1,GeneID:1012941;Name=NP_687202.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687202.1;transl_table=11
NC_004116.1	RefSeq	gene	191112	192305	.	+	.	ID=gene226;Dbxref=GeneID:1012942;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=SAG0168
NC_004116.1	RefSeq	CDS	191112	192305	.	+	0	ID=cds166;Parent=gene226;Dbxref=Genbank:NP_687203.1,GeneID:1012942;Name=NP_687203.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=NP_687203.1;transl_table=11
NC_004116.1	RefSeq	gene	192457	192663	.	+	.	ID=gene227;Dbxref=GeneID:1012943;Name=SAG0169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0169
NC_004116.1	RefSeq	CDS	192457	192663	.	+	0	ID=cds167;Parent=gene227;Dbxref=Genbank:NP_687204.1,GeneID:1012943;Name=NP_687204.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_687204.1;transl_table=11
NC_004116.1	RefSeq	gene	192722	192859	.	+	.	ID=gene228;Dbxref=GeneID:1012944;Name=SAG0170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0170
NC_004116.1	RefSeq	CDS	192722	192859	.	+	0	ID=cds168;Parent=gene228;Dbxref=Genbank:NP_687205.1,GeneID:1012944;Name=NP_687205.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687205.1;transl_table=11
NC_004116.1	RefSeq	gene	192900	193355	.	+	.	ID=gene229;Dbxref=GeneID:1012945;Name=SAG0171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0171
NC_004116.1	RefSeq	CDS	192900	193355	.	+	0	ID=cds169;Parent=gene229;Dbxref=Genbank:NP_687206.1,GeneID:1012945;Name=NP_687206.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687206.1;transl_table=11
NC_004116.1	RefSeq	gene	193424	194089	.	+	.	ID=gene230;Dbxref=GeneID:1012946;Name=SAG0172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0172
NC_004116.1	RefSeq	CDS	193424	194089	.	+	0	ID=cds170;Parent=gene230;Dbxref=Genbank:NP_687207.1,GeneID:1012946;Name=NP_687207.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=protease;protein_id=NP_687207.1;transl_table=11
NC_004116.1	RefSeq	gene	194110	194880	.	-	.	ID=gene231;Dbxref=GeneID:1012947;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=SAG0173
NC_004116.1	RefSeq	CDS	194110	194880	.	-	0	ID=cds171;Parent=gene231;Dbxref=Genbank:NP_687208.1,GeneID:1012947;Name=NP_687208.1;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=NP_687208.1;transl_table=11
NC_004116.1	RefSeq	gene	194950	196017	.	-	.	ID=gene232;Dbxref=GeneID:1012948;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=SAG0174
NC_004116.1	RefSeq	CDS	194950	196017	.	-	0	ID=cds172;Parent=gene232;Dbxref=Genbank:NP_687209.1,GeneID:1012948;Name=NP_687209.1;Note=similar to PID:1072381%3B identified by sequence similarity;gbkey=CDS;gene=pepA;product=glutamyl-aminopeptidase;protein_id=NP_687209.1;transl_table=11
NC_004116.1	RefSeq	gene	196202	196441	.	-	.	ID=gene233;Dbxref=GeneID:1012949;Name=SAG0175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0175
NC_004116.1	RefSeq	CDS	196202	196441	.	-	0	ID=cds173;Parent=gene233;Dbxref=Genbank:NP_687210.1,GeneID:1012949;Name=NP_687210.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687210.1;transl_table=11
NC_004116.1	RefSeq	gene	196602	196886	.	+	.	ID=gene234;Dbxref=GeneID:1012950;Name=SAG0176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0176
NC_004116.1	RefSeq	CDS	196602	196886	.	+	0	ID=cds174;Parent=gene234;Dbxref=Genbank:NP_687211.1,GeneID:1012950;Name=NP_687211.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687211.1;transl_table=11
NC_004116.1	RefSeq	gene	196883	197206	.	+	.	ID=gene235;Dbxref=GeneID:1012951;Name=SAG0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0177
NC_004116.1	RefSeq	CDS	196883	197206	.	+	0	ID=cds175;Parent=gene235;Dbxref=Genbank:NP_687212.1,GeneID:1012951;Name=NP_687212.1;Note=identified by match to PFAM protein family HMM PF00085;gbkey=CDS;product=thioredoxin;protein_id=NP_687212.1;transl_table=11
NC_004116.1	RefSeq	gene	197239	197865	.	+	.	ID=gene236;Dbxref=GeneID:1012952;Name=SAG0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0178
NC_004116.1	RefSeq	CDS	197239	197865	.	+	0	ID=cds176;Parent=gene236;Dbxref=Genbank:NP_687213.1,GeneID:1012952;Name=NP_687213.1;Note=identified by match to PFAM protein family HMM PF01588;gbkey=CDS;product=tRNA-binding domain-containing protein;protein_id=NP_687213.1;transl_table=11
NC_004116.1	RefSeq	gene	197919	198635	.	-	.	ID=gene237;Dbxref=GeneID:1012953;Name=SAG0179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0179
NC_004116.1	RefSeq	CDS	197919	198635	.	-	0	ID=cds177;Parent=gene237;Dbxref=Genbank:NP_687214.1,GeneID:1012953;Name=NP_687214.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687214.1;transl_table=11
NC_004116.1	RefSeq	gene	198716	199111	.	+	.	ID=gene238;Dbxref=GeneID:1012954;Name=ssb-1;gbkey=Gene;gene=ssb-1;gene_biotype=protein_coding;locus_tag=SAG0180
NC_004116.1	RefSeq	CDS	198716	199111	.	+	0	ID=cds178;Parent=gene238;Dbxref=Genbank:NP_687215.1,GeneID:1012954;Name=NP_687215.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;gene=ssb-1;product=single-stranded DNA-binding protein;protein_id=NP_687215.1;transl_table=11
NC_004116.1	RefSeq	gene	199235	199879	.	+	.	ID=gene239;Dbxref=GeneID:1012955;Name=SAG0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0181
NC_004116.1	RefSeq	CDS	199235	199879	.	+	0	ID=cds179;Parent=gene239;Dbxref=Genbank:NP_687216.1,GeneID:1012955;Name=NP_687216.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687216.1;transl_table=11
NC_004116.1	RefSeq	gene	199906	201651	.	+	.	ID=gene240;Dbxref=GeneID:1012956;Name=SAG0182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0182
NC_004116.1	RefSeq	CDS	199906	201651	.	+	0	ID=cds180;Parent=gene240;Dbxref=Genbank:NP_687217.1,GeneID:1012956;Name=NP_687217.1;Note=identified by match to PFAM protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_687217.1;transl_table=11
NC_004116.1	RefSeq	gene	201632	202372	.	+	.	ID=gene241;Dbxref=GeneID:1012957;Name=SAG0183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0183
NC_004116.1	RefSeq	CDS	201632	202372	.	+	0	ID=cds181;Parent=gene241;Dbxref=Genbank:NP_687218.1,GeneID:1012957;Name=NP_687218.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=response regulator;protein_id=NP_687218.1;transl_table=11
NC_004116.1	RefSeq	gene	202542	202997	.	+	.	ID=gene242;Dbxref=GeneID:1012958;Name=SAG0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0184
NC_004116.1	RefSeq	CDS	202542	202997	.	+	0	ID=cds182;Parent=gene242;Dbxref=Genbank:NP_687219.1,GeneID:1012958;Name=NP_687219.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687219.1;transl_table=11
NC_004116.1	RefSeq	gene	202999	203727	.	+	.	ID=gene243;Dbxref=GeneID:1012959;Name=SAG0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0185
NC_004116.1	RefSeq	CDS	202999	203727	.	+	0	ID=cds183;Parent=gene243;Dbxref=Genbank:NP_687220.1,GeneID:1012959;Name=NP_687220.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687220.1;transl_table=11
NC_004116.1	RefSeq	gene	203839	203949	.	-	.	ID=gene244;Dbxref=GeneID:1012960;Name=SAG0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0186
NC_004116.1	RefSeq	CDS	203839	203949	.	-	0	ID=cds184;Parent=gene244;Dbxref=Genbank:NP_687221.1,GeneID:1012960;Name=NP_687221.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687221.1;transl_table=11
NC_004116.1	RefSeq	gene	203970	205598	.	+	.	ID=gene245;Dbxref=GeneID:1012961;Name=SAG0187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0187
NC_004116.1	RefSeq	CDS	203970	205598	.	+	0	ID=cds185;Parent=gene245;Dbxref=Genbank:NP_687222.1,GeneID:1012961;Name=NP_687222.1;Note=identified by match to PFAM protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter oligopeptide-binding protein;protein_id=NP_687222.1;transl_table=11
NC_004116.1	RefSeq	gene	205711	206688	.	+	.	ID=gene246;Dbxref=GeneID:1012962;Name=SAG0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0188
NC_004116.1	RefSeq	CDS	205711	206688	.	+	0	ID=cds186;Parent=gene246;Dbxref=Genbank:NP_687223.1,GeneID:1012962;Name=NP_687223.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=oligopeptide ABC transporter permease;protein_id=NP_687223.1;transl_table=11
NC_004116.1	RefSeq	gene	206685	207506	.	+	.	ID=gene247;Dbxref=GeneID:1012963;Name=SAG0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0189
NC_004116.1	RefSeq	CDS	206685	207506	.	+	0	ID=cds187;Parent=gene247;Dbxref=Genbank:NP_687224.1,GeneID:1012963;Name=NP_687224.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=oligopeptide ABC transporter permease;protein_id=NP_687224.1;transl_table=11
NC_004116.1	RefSeq	gene	207518	208321	.	+	.	ID=gene248;Dbxref=GeneID:1012964;Name=SAG0190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0190
NC_004116.1	RefSeq	CDS	207518	208321	.	+	0	ID=cds188;Parent=gene248;Dbxref=Genbank:NP_687225.1,GeneID:1012964;Name=NP_687225.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=NP_687225.1;transl_table=11
NC_004116.1	RefSeq	gene	208305	208931	.	+	.	ID=gene249;Dbxref=GeneID:1012965;Name=SAG0191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0191
NC_004116.1	RefSeq	CDS	208305	208931	.	+	0	ID=cds189;Parent=gene249;Dbxref=Genbank:NP_687226.1,GeneID:1012965;Name=NP_687226.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=NP_687226.1;transl_table=11
NC_004116.1	RefSeq	gene	209214	211244	.	+	.	ID=gene250;Dbxref=GeneID:1012966;Name=SAG0192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0192
NC_004116.1	RefSeq	CDS	209214	211244	.	+	0	ID=cds190;Parent=gene250;Dbxref=Genbank:NP_687227.1,GeneID:1012966;Name=NP_687227.1;Note=identified by match to PFAM protein family HMM PF00358;gbkey=CDS;product=PTS system transporter subunit IIABC;protein_id=NP_687227.1;transl_table=11
NC_004116.1	RefSeq	gene	211466	213091	.	+	.	ID=gene251;Dbxref=GeneID:1012967;Name=SAG0193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0193
NC_004116.1	RefSeq	CDS	211466	213091	.	+	0	ID=cds191;Parent=gene251;Dbxref=Genbank:NP_687228.1,GeneID:1012967;Name=NP_687228.1;Note=identified by match to PFAM protein family HMM PF00128;gbkey=CDS;product=alpha amylase;protein_id=NP_687228.1;transl_table=11
NC_004116.1	RefSeq	gene	213307	215226	.	+	.	ID=gene252;Dbxref=GeneID:1012968;Name=SAG0194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0194
NC_004116.1	RefSeq	CDS	213307	215226	.	+	0	ID=cds192;Parent=gene252;Dbxref=Genbank:NP_687229.1,GeneID:1012968;Name=NP_687229.1;Note=identified by match to PFAM protein family HMM PF00359;gbkey=CDS;product=BglG family transcriptional antiterminator;protein_id=NP_687229.1;transl_table=11
NC_004116.1	RefSeq	gene	215240	216373	.	-	.	ID=gene253;Dbxref=GeneID:1012969;Name=SAG0195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0195
NC_004116.1	RefSeq	CDS	215240	216373	.	-	0	ID=cds193;Parent=gene253;Dbxref=Genbank:NP_687230.1,GeneID:1012969;Name=NP_687230.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1548 transposase;protein_id=NP_687230.1;transl_table=11
NC_004116.1	RefSeq	gene	216468	216668	.	+	.	ID=gene254;Dbxref=GeneID:1012970;Name=SAG0196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0196
NC_004116.1	RefSeq	CDS	216468	216668	.	+	0	ID=cds194;Parent=gene254;Dbxref=Genbank:NP_687231.1,GeneID:1012970;Name=NP_687231.1;Note=similar to OMNI:SP2131%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687231.1;transl_table=11
NC_004116.1	RefSeq	gene	216671	216955	.	+	.	ID=gene255;Dbxref=GeneID:1012971;Name=SAG0197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0197
NC_004116.1	RefSeq	CDS	216671	216955	.	+	0	ID=cds195;Parent=gene255;Dbxref=Genbank:NP_687232.1,GeneID:1012971;Name=NP_687232.1;Note=similar to OMNI:SP2130%3B identified by sequence similarity;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=NP_687232.1;transl_table=11
NC_004116.1	RefSeq	gene	216968	218323	.	+	.	ID=gene256;Dbxref=GeneID:1012972;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=SAG0198
NC_004116.1	RefSeq	CDS	216968	218323	.	+	0	ID=cds196;Parent=gene256;Dbxref=Genbank:NP_687233.1,GeneID:1012972;Name=NP_687233.1;Note=membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;gbkey=CDS;gene=ulaA;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=NP_687233.1;transl_table=11
NC_004116.1	RefSeq	gene	218326	219183	.	+	.	ID=gene257;Dbxref=GeneID:1012973;Name=SAG0199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0199
NC_004116.1	RefSeq	CDS	218326	219183	.	+	0	ID=cds197;Parent=gene257;Dbxref=Genbank:NP_687234.1,GeneID:1012973;Name=NP_687234.1;Note=identified by match to PFAM protein family HMM PF00456;gbkey=CDS;product=transketolase;protein_id=NP_687234.1;transl_table=11
NC_004116.1	RefSeq	gene	219180	220109	.	+	.	ID=gene258;Dbxref=GeneID:1012974;Name=SAG0200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0200
NC_004116.1	RefSeq	CDS	219180	220109	.	+	0	ID=cds198;Parent=gene258;Dbxref=Genbank:NP_687235.1,GeneID:1012974;Name=NP_687235.1;Note=identified by match to PFAM protein family HMM PF02779;gbkey=CDS;product=transketolase;protein_id=NP_687235.1;transl_table=11
NC_004116.1	RefSeq	gene	220218	221477	.	+	.	ID=gene259;Dbxref=GeneID:1012975;Name=SAG0201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0201
NC_004116.1	RefSeq	CDS	220218	221477	.	+	0	ID=cds199;Parent=gene259;Dbxref=Genbank:NP_687236.1,GeneID:1012975;Name=NP_687236.1;Note=identified by match to PFAM protein family HMM PF00175;gbkey=CDS;product=oxidoreductase;protein_id=NP_687236.1;transl_table=11
NC_004116.1	RefSeq	gene	221565	221834	.	+	.	ID=gene260;Dbxref=GeneID:1012976;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=SAG0202
NC_004116.1	RefSeq	CDS	221565	221834	.	+	0	ID=cds200;Parent=gene260;Dbxref=Genbank:NP_687237.1,GeneID:1012976;Name=NP_687237.1;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=NP_687237.1;transl_table=11
NC_004116.1	RefSeq	gene	222215	224344	.	+	.	ID=gene261;Dbxref=GeneID:1012977;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=SAG0203
NC_004116.1	RefSeq	CDS	222215	224344	.	+	0	ID=cds201;Parent=gene261;Dbxref=Genbank:NP_687238.1,GeneID:1012977;Name=NP_687238.1;Note=identified by match to PFAM protein family HMM PF00013;gbkey=CDS;gene=pnp;product=polynucleotide phosphorylase;protein_id=NP_687238.1;transl_table=11
NC_004116.1	RefSeq	gene	224346	225098	.	+	.	ID=gene262;Dbxref=GeneID:1012978;Name=SAG0204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0204
NC_004116.1	RefSeq	CDS	224346	225098	.	+	0	ID=cds202;Parent=gene262;Dbxref=Genbank:NP_687239.1,GeneID:1012978;Name=NP_687239.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687239.1;transl_table=11
NC_004116.1	RefSeq	gene	225107	225691	.	+	.	ID=gene263;Dbxref=GeneID:1012979;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SAG0205
NC_004116.1	RefSeq	CDS	225107	225691	.	+	0	ID=cds203;Parent=gene263;Dbxref=Genbank:NP_687240.1,GeneID:1012979;Name=NP_687240.1;Note=identified by match to PFAM protein family HMM PF00132;gbkey=CDS;gene=cysE;product=serine O-acetyltransferase;protein_id=NP_687240.1;transl_table=11
NC_004116.1	RefSeq	gene	225701	225883	.	+	.	ID=gene264;Dbxref=GeneID:1012980;Name=SAG0206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0206
NC_004116.1	RefSeq	CDS	225701	225883	.	+	0	ID=cds204;Parent=gene264;Dbxref=Genbank:NP_687241.1,GeneID:1012980;Name=NP_687241.1;gbkey=CDS;product=lipoprotein;protein_id=NP_687241.1;transl_table=11
NC_004116.1	RefSeq	gene	225880	227223	.	+	.	ID=gene265;Dbxref=GeneID:1012981;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SAG0207
NC_004116.1	RefSeq	CDS	225880	227223	.	+	0	ID=cds205;Parent=gene265;Dbxref=Genbank:NP_687242.1,GeneID:1012981;Name=NP_687242.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=NP_687242.1;transl_table=11
NC_004116.1	RefSeq	gene	227216	227602	.	+	.	ID=gene266;Dbxref=GeneID:1012982;Name=SAG0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0208
NC_004116.1	RefSeq	CDS	227216	227602	.	+	0	ID=cds206;Parent=gene266;Dbxref=Genbank:NP_687243.1,GeneID:1012982;Name=NP_687243.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687243.1;transl_table=11
NC_004116.1	RefSeq	gene	227705	228460	.	+	.	ID=gene267;Dbxref=GeneID:1012983;Name=SAG0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0209
NC_004116.1	RefSeq	CDS	227705	228460	.	+	0	ID=cds207;Parent=gene267;Dbxref=Genbank:NP_687244.1,GeneID:1012983;Name=NP_687244.1;Note=identified by match to PFAM protein family HMM PF00588;gbkey=CDS;product=RNA methyltransferase;protein_id=NP_687244.1;transl_table=11
NC_004116.1	RefSeq	gene	228457	228975	.	+	.	ID=gene268;Dbxref=GeneID:1012984;Name=SAG0210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0210
NC_004116.1	RefSeq	CDS	228457	228975	.	+	0	ID=cds208;Parent=gene268;Dbxref=Genbank:NP_687245.1,GeneID:1012984;Name=NP_687245.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687245.1;transl_table=11
NC_004116.1	RefSeq	gene	229068	229928	.	+	.	ID=gene269;Dbxref=GeneID:1012985;Name=SAG0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0211
NC_004116.1	RefSeq	CDS	229068	229928	.	+	0	ID=cds209;Parent=gene269;Dbxref=Genbank:NP_687246.1,GeneID:1012985;Name=NP_687246.1;Note=identified by match to PFAM protein family HMM PF02645;gbkey=CDS;product=DegV family protein;protein_id=NP_687246.1;transl_table=11
NC_004116.1	RefSeq	gene	230061	230159	.	+	.	ID=gene270;Dbxref=GeneID:1012986;Name=SAG0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0212
NC_004116.1	RefSeq	CDS	230061	230159	.	+	0	ID=cds210;Parent=gene270;Dbxref=Genbank:NP_687247.1,GeneID:1012986;Name=NP_687247.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687247.1;transl_table=11
NC_004116.1	RefSeq	gene	230273	230392	.	+	.	ID=gene271;Dbxref=GeneID:1012987;Name=SAG0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0213
NC_004116.1	RefSeq	CDS	230273	230392	.	+	0	ID=cds211;Parent=gene271;Dbxref=Genbank:NP_687248.1,GeneID:1012987;Name=NP_687248.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687248.1;transl_table=11
NC_004116.1	RefSeq	gene	230809	231255	.	+	.	ID=gene272;Dbxref=GeneID:1012988;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=SAG0214
NC_004116.1	RefSeq	CDS	230809	231255	.	+	0	ID=cds212;Parent=gene272;Dbxref=Genbank:NP_687249.1,GeneID:1012988;Name=NP_687249.1;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=NP_687249.1;transl_table=11
NC_004116.1	RefSeq	gene	231276	231668	.	+	.	ID=gene273;Dbxref=GeneID:1012989;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=SAG0215
NC_004116.1	RefSeq	CDS	231276	231668	.	+	0	ID=cds213;Parent=gene273;Dbxref=Genbank:NP_687250.1,GeneID:1012989;Name=NP_687250.1;Note=forms a direct contact with the tRNA during translation;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=NP_687250.1;transl_table=11
NC_004116.1	RefSeq	gene	231682	231783	.	-	.	ID=gene274;Dbxref=GeneID:1012990;Name=SAG0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0216
NC_004116.1	RefSeq	CDS	231682	231783	.	-	0	ID=cds214;Parent=gene274;Dbxref=Genbank:NP_687251.1,GeneID:1012990;Name=NP_687251.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687251.1;transl_table=11
NC_004116.1	RefSeq	gene	231796	232950	.	-	.	ID=gene275;Dbxref=GeneID:1012991;Name=SAG0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0217
NC_004116.1	RefSeq	CDS	231796	232950	.	-	0	ID=cds215;Parent=gene275;Dbxref=Genbank:NP_687252.1,GeneID:1012991;Name=NP_687252.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=phage integrase family site specific recombinase;protein_id=NP_687252.1;transl_table=11
NC_004116.1	RefSeq	gene	233015	233491	.	-	.	ID=gene276;Dbxref=GeneID:1012992;Name=SAG0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0218
NC_004116.1	RefSeq	CDS	233015	233491	.	-	0	ID=cds216;Parent=gene276;Dbxref=Genbank:NP_687253.1,GeneID:1012992;Name=NP_687253.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_687253.1;transl_table=11
NC_004116.1	RefSeq	gene	233645	233950	.	+	.	ID=gene277;Dbxref=GeneID:1012993;Name=SAG0219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0219
NC_004116.1	RefSeq	CDS	233645	233950	.	+	0	ID=cds217;Parent=gene277;Dbxref=Genbank:NP_687254.1,GeneID:1012993;Name=NP_687254.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687254.1;transl_table=11
NC_004116.1	RefSeq	gene	234087	234365	.	+	.	ID=gene278;Dbxref=GeneID:1012994;Name=SAG0220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0220
NC_004116.1	RefSeq	CDS	234087	234365	.	+	0	ID=cds218;Parent=gene278;Dbxref=Genbank:NP_687255.1,GeneID:1012994;Name=NP_687255.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687255.1;transl_table=11
NC_004116.1	RefSeq	gene	234376	234606	.	+	.	ID=gene279;Dbxref=GeneID:1012995;Name=SAG0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0221
NC_004116.1	RefSeq	CDS	234376	234606	.	+	0	ID=cds219;Parent=gene279;Dbxref=Genbank:NP_687256.1,GeneID:1012995;Name=NP_687256.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687256.1;transl_table=11
NC_004116.1	RefSeq	gene	234619	234945	.	+	.	ID=gene280;Dbxref=GeneID:1012996;Name=SAG0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0222
NC_004116.1	RefSeq	CDS	234619	234945	.	+	0	ID=cds220;Parent=gene280;Dbxref=Genbank:NP_687257.1,GeneID:1012996;Name=NP_687257.1;Note=similar to OMNI:EFC0001%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687257.1;transl_table=11
NC_004116.1	RefSeq	gene	234949	235578	.	+	.	ID=gene281;Dbxref=GeneID:1012997;Name=SAG0223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0223
NC_004116.1	RefSeq	CDS	234949	235578	.	+	0	ID=cds221;Parent=gene281;Dbxref=Genbank:NP_687258.1,GeneID:1012997;Name=NP_687258.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687258.1;transl_table=11
NC_004116.1	RefSeq	gene	235768	236766	.	+	.	ID=gene282;Dbxref=GeneID:1012998;Name=SAG0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0224
NC_004116.1	RefSeq	CDS	235768	236766	.	+	0	ID=cds222;Parent=gene282;Dbxref=Genbank:NP_687259.1,GeneID:1012998;Name=NP_687259.1;Note=identified by match to PFAM protein family HMM PF02486;gbkey=CDS;product=replication initiation protein;protein_id=NP_687259.1;transl_table=11
NC_004116.1	RefSeq	gene	236802	237236	.	+	.	ID=gene283;Dbxref=GeneID:1012999;Name=SAG0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0225
NC_004116.1	RefSeq	CDS	236802	237236	.	+	0	ID=cds223;Parent=gene283;Dbxref=Genbank:NP_687260.1,GeneID:1012999;Name=NP_687260.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687260.1;transl_table=11
NC_004116.1	RefSeq	gene	237552	238808	.	+	.	ID=gene284;Dbxref=GeneID:1013000;Name=SAG0226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0226
NC_004116.1	RefSeq	CDS	237552	238808	.	+	0	ID=cds224;Parent=gene284;Dbxref=Genbank:NP_687261.1,GeneID:1013000;Name=NP_687261.1;Note=identified by match to PFAM protein family HMM PF01076;gbkey=CDS;product=recombination protein;protein_id=NP_687261.1;transl_table=11
NC_004116.1	RefSeq	gene	238976	239446	.	+	.	ID=gene285;Dbxref=GeneID:1013001;Name=SAG0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0227
NC_004116.1	RefSeq	CDS	238976	239446	.	+	0	ID=cds225;Parent=gene285;Dbxref=Genbank:NP_687262.1,GeneID:1013001;Name=NP_687262.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687262.1;transl_table=11
NC_004116.1	RefSeq	gene	239751	240086	.	-	.	ID=gene286;Dbxref=GeneID:1013002;Name=SAG0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0228
NC_004116.1	RefSeq	CDS	239751	240086	.	-	0	ID=cds226;Parent=gene286;Dbxref=Genbank:NP_687263.1,GeneID:1013002;Name=NP_687263.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687263.1;transl_table=11
NC_004116.1	RefSeq	gene	240076	240363	.	-	.	ID=gene287;Dbxref=GeneID:1013003;Name=SAG0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0229
NC_004116.1	RefSeq	CDS	240076	240363	.	-	0	ID=cds227;Parent=gene287;Dbxref=Genbank:NP_687264.1,GeneID:1013003;Name=NP_687264.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687264.1;transl_table=11
NC_004116.1	RefSeq	gene	240870	241160	.	+	.	ID=gene288;Dbxref=GeneID:1013004;Name=SAG0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0230
NC_004116.1	RefSeq	CDS	240870	241160	.	+	0	ID=cds228;Parent=gene288;Dbxref=Genbank:NP_687265.1,GeneID:1013004;Name=NP_687265.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687265.1;transl_table=11
NC_004116.1	RefSeq	gene	241262	241669	.	+	.	ID=gene289;Dbxref=GeneID:1013005;Name=SAG0231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0231
NC_004116.1	RefSeq	CDS	241262	241669	.	+	0	ID=cds229;Parent=gene289;Dbxref=Genbank:NP_687266.1,GeneID:1013005;Name=NP_687266.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687266.1;transl_table=11
NC_004116.1	RefSeq	gene	241669	242229	.	+	.	ID=gene290;Dbxref=GeneID:1013006;Name=SAG0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0232
NC_004116.1	RefSeq	CDS	241669	242229	.	+	0	ID=cds230;Parent=gene290;Dbxref=Genbank:NP_687267.1,GeneID:1013006;Name=NP_687267.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687267.1;transl_table=11
NC_004116.1	RefSeq	gene	242202	242882	.	+	.	ID=gene291;Dbxref=GeneID:1013007;Name=SAG0233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0233
NC_004116.1	RefSeq	CDS	242202	242882	.	+	0	ID=cds231;Parent=gene291;Dbxref=Genbank:NP_687268.1,GeneID:1013007;Name=NP_687268.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687268.1;transl_table=11
NC_004116.1	RefSeq	gene	242867	243253	.	+	.	ID=gene292;Dbxref=GeneID:1013008;Name=SAG0234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0234
NC_004116.1	RefSeq	CDS	242867	243253	.	+	0	ID=cds232;Parent=gene292;Dbxref=Genbank:NP_687269.1,GeneID:1013008;Name=NP_687269.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687269.1;transl_table=11
NC_004116.1	RefSeq	gene	243287	243568	.	+	.	ID=gene293;Dbxref=GeneID:1013009;Name=SAG0235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0235
NC_004116.1	RefSeq	CDS	243287	243568	.	+	0	ID=cds233;Parent=gene293;Dbxref=Genbank:NP_687270.1,GeneID:1013009;Name=NP_687270.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687270.1;transl_table=11
NC_004116.1	RefSeq	gene	243659	243757	.	+	.	ID=gene294;Dbxref=GeneID:1013010;Name=SAG0236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0236
NC_004116.1	RefSeq	CDS	243659	243757	.	+	0	ID=cds234;Parent=gene294;Dbxref=Genbank:NP_687271.1,GeneID:1013010;Name=NP_687271.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687271.1;transl_table=11
NC_004116.1	RefSeq	gene	244185	244289	.	+	.	ID=gene295;Dbxref=GeneID:1013011;Name=SAG0237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0237
NC_004116.1	RefSeq	CDS	244185	244289	.	+	0	ID=cds235;Parent=gene295;Dbxref=Genbank:NP_687272.1,GeneID:1013011;Name=NP_687272.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687272.1;transl_table=11
NC_004116.1	RefSeq	gene	244286	244411	.	+	.	ID=gene296;Dbxref=GeneID:1013012;Name=SAG0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0238
NC_004116.1	RefSeq	CDS	244286	244411	.	+	0	ID=cds236;Parent=gene296;Dbxref=Genbank:NP_687273.1,GeneID:1013012;Name=NP_687273.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687273.1;transl_table=11
NC_004116.1	RefSeq	gene	244411	245271	.	+	.	ID=gene297;Dbxref=GeneID:1013013;Name=SAG0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0239
NC_004116.1	RefSeq	CDS	244411	245271	.	+	0	ID=cds237;Parent=gene297;Dbxref=Genbank:NP_687274.1,GeneID:1013013;Name=NP_687274.1;gbkey=CDS;product=MutR family transcriptional regulator;protein_id=NP_687274.1;transl_table=11
NC_004116.1	RefSeq	gene	245344	246525	.	+	.	ID=gene298;Dbxref=GeneID:1013014;Name=SAG0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0240
NC_004116.1	RefSeq	CDS	245344	246525	.	+	0	ID=cds238;Parent=gene298;Dbxref=Genbank:NP_687275.1,GeneID:1013014;Name=NP_687275.1;gbkey=CDS;product=transporter;protein_id=NP_687275.1;transl_table=11
NC_004116.1	RefSeq	gene	246587	247228	.	-	.	ID=gene299;Dbxref=GeneID:1013015;Name=SAG0241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0241
NC_004116.1	RefSeq	CDS	246587	247228	.	-	0	ID=cds239;Parent=gene299;Dbxref=Genbank:NP_687276.1,GeneID:1013015;Name=NP_687276.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687276.1;transl_table=11
NC_004116.1	RefSeq	gene	247238	248164	.	-	.	ID=gene300;Dbxref=GeneID:1013016;Name=SAG0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0242
NC_004116.1	RefSeq	CDS	247238	248164	.	-	0	ID=cds240;Parent=gene300;Dbxref=Genbank:NP_687277.1,GeneID:1013016;Name=NP_687277.1;Note=similar to GB:AL009126%3B identified by sequence similarity;gbkey=CDS;product=amino acid ABC transporter amino acid-binding protein;protein_id=NP_687277.1;transl_table=11
NC_004116.1	RefSeq	gene	248167	248802	.	-	.	ID=gene301;Dbxref=GeneID:1013017;Name=SAG0243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0243
NC_004116.1	RefSeq	CDS	248167	248802	.	-	0	ID=cds241;Parent=gene301;Dbxref=Genbank:NP_687278.1,GeneID:1013017;Name=NP_687278.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687278.1;transl_table=11
NC_004116.1	RefSeq	gene	248802	249947	.	-	.	ID=gene302;Dbxref=GeneID:1013018;Name=SAG0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0244
NC_004116.1	RefSeq	CDS	248802	249947	.	-	0	ID=cds242;Parent=gene302;Dbxref=Genbank:NP_687279.1,GeneID:1013018;Name=NP_687279.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_687279.1;transl_table=11
NC_004116.1	RefSeq	gene	250368	251918	.	+	.	ID=gene303;Dbxref=GeneID:1013019;Name=Sa16SE;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SE
NC_004116.1	RefSeq	rRNA	250368	251918	.	+	.	ID=rna59;Parent=gene303;Dbxref=GeneID:1013019;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	250368	251918	.	+	.	ID=id60;Parent=rna59;Dbxref=GeneID:1013019;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	251971	252043	.	+	.	ID=gene304;Dbxref=GeneID:1013020;Name=tRNA-Ala-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-4
NC_004116.1	RefSeq	tRNA	251971	252043	.	+	.	ID=rna60;Parent=gene304;Dbxref=GeneID:1013020;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	251971	252043	.	+	.	ID=id61;Parent=rna60;Dbxref=GeneID:1013020;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	252198	255100	.	+	.	ID=gene305;Dbxref=GeneID:1013021;Name=Sa23SE;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SE
NC_004116.1	RefSeq	rRNA	252198	255100	.	+	.	ID=rna61;Parent=gene305;Dbxref=GeneID:1013021;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	252198	255100	.	+	.	ID=id62;Parent=rna61;Dbxref=GeneID:1013021;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	255174	255290	.	+	.	ID=gene306;Dbxref=GeneID:5228959;Name=SAG_r04;gbkey=Gene;gene_biotype=rRNA;locus_tag=SAG_r04
NC_004116.1	RefSeq	rRNA	255174	255290	.	+	.	ID=rna62;Parent=gene306;Dbxref=GeneID:5228959;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	255174	255290	.	+	.	ID=id63;Parent=rna62;Dbxref=GeneID:5228959;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	255294	255366	.	+	.	ID=gene307;Dbxref=GeneID:1013022;Name=tRNA-Val-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Val-3
NC_004116.1	RefSeq	tRNA	255294	255366	.	+	.	ID=rna63;Parent=gene307;Dbxref=GeneID:1013022;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	exon	255294	255366	.	+	.	ID=id64;Parent=rna63;Dbxref=GeneID:1013022;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	gene	255372	255442	.	+	.	ID=gene308;Dbxref=GeneID:1013023;Name=tRNA-Gly-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gly-4
NC_004116.1	RefSeq	tRNA	255372	255442	.	+	.	ID=rna64;Parent=gene308;Dbxref=GeneID:1013023;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	exon	255372	255442	.	+	.	ID=id65;Parent=rna64;Dbxref=GeneID:1013023;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	gene	255479	255555	.	+	.	ID=gene309;Dbxref=GeneID:1013024;Name=tRNA-Ile-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ile-2
NC_004116.1	RefSeq	tRNA	255479	255555	.	+	.	ID=rna65;Parent=gene309;Dbxref=GeneID:1013024;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	exon	255479	255555	.	+	.	ID=id66;Parent=rna65;Dbxref=GeneID:1013024;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	gene	255563	255634	.	+	.	ID=gene310;Dbxref=GeneID:1013025;Name=tRNA-Glu-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Glu-3
NC_004116.1	RefSeq	tRNA	255563	255634	.	+	.	ID=rna66;Parent=gene310;Dbxref=GeneID:1013025;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	exon	255563	255634	.	+	.	ID=id67;Parent=rna66;Dbxref=GeneID:1013025;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	gene	255648	255737	.	+	.	ID=gene311;Dbxref=GeneID:1013026;Name=tRNA-Ser-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ser-3
NC_004116.1	RefSeq	tRNA	255648	255737	.	+	.	ID=rna67;Parent=gene311;Dbxref=GeneID:1013026;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	exon	255648	255737	.	+	.	ID=id68;Parent=rna67;Dbxref=GeneID:1013026;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	gene	255748	255821	.	+	.	ID=gene312;Dbxref=GeneID:1013027;Name=tRNA-Met-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Met-4
NC_004116.1	RefSeq	tRNA	255748	255821	.	+	.	ID=rna68;Parent=gene312;Dbxref=GeneID:1013027;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	exon	255748	255821	.	+	.	ID=id69;Parent=rna68;Dbxref=GeneID:1013027;gbkey=tRNA;product=tRNA-Met
NC_004116.1	RefSeq	gene	255824	255896	.	+	.	ID=gene313;Dbxref=GeneID:1013028;Name=tRNA-Phe-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Phe-2
NC_004116.1	RefSeq	tRNA	255824	255896	.	+	.	ID=rna69;Parent=gene313;Dbxref=GeneID:1013028;gbkey=tRNA;product=tRNA-Phe
NC_004116.1	RefSeq	exon	255824	255896	.	+	.	ID=id70;Parent=rna69;Dbxref=GeneID:1013028;gbkey=tRNA;product=tRNA-Phe
NC_004116.1	RefSeq	gene	255908	255988	.	+	.	ID=gene314;Dbxref=GeneID:1013029;Name=tRNA-Tyr-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Tyr-2
NC_004116.1	RefSeq	tRNA	255908	255988	.	+	.	ID=rna70;Parent=gene314;Dbxref=GeneID:1013029;gbkey=tRNA;product=tRNA-Tyr
NC_004116.1	RefSeq	exon	255908	255988	.	+	.	ID=id71;Parent=rna70;Dbxref=GeneID:1013029;gbkey=tRNA;product=tRNA-Tyr
NC_004116.1	RefSeq	gene	255995	256065	.	+	.	ID=gene315;Dbxref=GeneID:1013030;Name=tRNA-Trp-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Trp-1
NC_004116.1	RefSeq	tRNA	255995	256065	.	+	.	ID=rna71;Parent=gene315;Dbxref=GeneID:1013030;gbkey=tRNA;product=tRNA-Trp
NC_004116.1	RefSeq	exon	255995	256065	.	+	.	ID=id72;Parent=rna71;Dbxref=GeneID:1013030;gbkey=tRNA;product=tRNA-Trp
NC_004116.1	RefSeq	gene	256080	256152	.	+	.	ID=gene316;Dbxref=GeneID:1013031;Name=tRNA-His-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-His-1
NC_004116.1	RefSeq	tRNA	256080	256152	.	+	.	ID=rna72;Parent=gene316;Dbxref=GeneID:1013031;gbkey=tRNA;product=tRNA-His
NC_004116.1	RefSeq	exon	256080	256152	.	+	.	ID=id73;Parent=rna72;Dbxref=GeneID:1013031;gbkey=tRNA;product=tRNA-His
NC_004116.1	RefSeq	gene	256159	256230	.	+	.	ID=gene317;Dbxref=GeneID:1013032;Name=tRNA-Gln-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gln-3
NC_004116.1	RefSeq	tRNA	256159	256230	.	+	.	ID=rna73;Parent=gene317;Dbxref=GeneID:1013032;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	exon	256159	256230	.	+	.	ID=id74;Parent=rna73;Dbxref=GeneID:1013032;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	gene	256241	256324	.	+	.	ID=gene318;Dbxref=GeneID:1013033;Name=tRNA-Leu-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Leu-5
NC_004116.1	RefSeq	tRNA	256241	256324	.	+	.	ID=rna74;Parent=gene318;Dbxref=GeneID:1013033;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	exon	256241	256324	.	+	.	ID=id75;Parent=rna74;Dbxref=GeneID:1013033;gbkey=tRNA;product=tRNA-Leu
NC_004116.1	RefSeq	gene	256634	257092	.	+	.	ID=gene319;Dbxref=GeneID:1013034;Name=SAG0245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0245
NC_004116.1	RefSeq	CDS	256634	257092	.	+	0	ID=cds243;Parent=gene319;Dbxref=Genbank:NP_687280.1,GeneID:1013034;Name=NP_687280.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687280.1;transl_table=11
NC_004116.1	RefSeq	gene	257156	257962	.	+	.	ID=gene320;Dbxref=GeneID:1013035;Name=SAG0246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0246
NC_004116.1	RefSeq	CDS	257156	257962	.	+	0	ID=cds244;Parent=gene320;Dbxref=Genbank:NP_687281.1,GeneID:1013035;Name=NP_687281.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687281.1;transl_table=11
NC_004116.1	RefSeq	gene	258440	258790	.	+	.	ID=gene321;Dbxref=GeneID:1013036;Name=SAG0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0247
NC_004116.1	RefSeq	CDS	258440	258790	.	+	0	ID=cds245;Parent=gene321;Dbxref=Genbank:NP_687282.1,GeneID:1013036;Name=NP_687282.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687282.1;transl_table=11
NC_004116.1	RefSeq	gene	258809	259081	.	+	.	ID=gene322;Dbxref=GeneID:1013037;Name=SAG0248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0248
NC_004116.1	RefSeq	CDS	258809	259081	.	+	0	ID=cds246;Parent=gene322;Dbxref=Genbank:NP_687283.1,GeneID:1013037;Name=NP_687283.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687283.1;transl_table=11
NC_004116.1	RefSeq	gene	259091	259441	.	+	.	ID=gene323;Dbxref=GeneID:1013038;Name=SAG0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0249
NC_004116.1	RefSeq	CDS	259091	259441	.	+	0	ID=cds247;Parent=gene323;Dbxref=Genbank:NP_687284.1,GeneID:1013038;Name=NP_687284.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687284.1;transl_table=11
NC_004116.1	RefSeq	gene	260302	260883	.	+	.	ID=gene324;Dbxref=GeneID:1013039;Name=SAG0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0250
NC_004116.1	RefSeq	CDS	260302	260883	.	+	0	ID=cds248;Parent=gene324;Dbxref=Genbank:NP_687285.1,GeneID:1013039;Name=NP_687285.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687285.1;transl_table=11
NC_004116.1	RefSeq	gene	260886	261104	.	+	.	ID=gene325;Dbxref=GeneID:1013040;Name=SAG0251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0251
NC_004116.1	RefSeq	CDS	260886	261104	.	+	0	ID=cds249;Parent=gene325;Dbxref=Genbank:NP_687286.1,GeneID:1013040;Name=NP_687286.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_687286.1;transl_table=11
NC_004116.1	RefSeq	gene	261677	262237	.	+	.	ID=gene326;Dbxref=GeneID:1013041;Name=SAG0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0252
NC_004116.1	RefSeq	CDS	261677	262237	.	+	0	ID=cds250;Parent=gene326;Dbxref=Genbank:NP_687287.1,GeneID:1013041;Name=NP_687287.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687287.1;transl_table=11
NC_004116.1	RefSeq	gene	262337	262915	.	+	.	ID=gene327;Dbxref=GeneID:1013042;Name=SAG0253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0253
NC_004116.1	RefSeq	CDS	262337	262915	.	+	0	ID=cds251;Parent=gene327;Dbxref=Genbank:NP_687288.1,GeneID:1013042;Name=NP_687288.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687288.1;transl_table=11
NC_004116.1	RefSeq	gene	262958	263638	.	+	.	ID=gene328;Dbxref=GeneID:1013043;Name=SAG0254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0254
NC_004116.1	RefSeq	CDS	262958	263638	.	+	0	ID=cds252;Parent=gene328;Dbxref=Genbank:NP_687289.1,GeneID:1013043;Name=NP_687289.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687289.1;transl_table=11
NC_004116.1	RefSeq	gene	263898	264845	.	-	.	ID=gene329;Dbxref=GeneID:1013044;Name=SAG0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0255
NC_004116.1	RefSeq	CDS	263898	264845	.	-	0	ID=cds253;Parent=gene329;Dbxref=Genbank:NP_687290.1,GeneID:1013044;Name=NP_687290.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687290.1;transl_table=11
NC_004116.1	RefSeq	gene	264842	265333	.	-	.	ID=gene330;Dbxref=GeneID:1013045;Name=SAG0256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0256
NC_004116.1	RefSeq	CDS	264842	265333	.	-	0	ID=cds254;Parent=gene330;Dbxref=Genbank:NP_687291.1,GeneID:1013045;Name=NP_687291.1;Note=identified by match to PFAM protein family HMM PF00776;gbkey=CDS;product=ECF subfamily RNA polymerase sigma factor;protein_id=NP_687291.1;transl_table=11
NC_004116.1	RefSeq	gene	265617	265778	.	+	.	ID=gene331;Dbxref=GeneID:1013046;Name=SAG0257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0257
NC_004116.1	RefSeq	CDS	265617	265778	.	+	0	ID=cds255;Parent=gene331;Dbxref=Genbank:NP_687292.1,GeneID:1013046;Name=NP_687292.1;gbkey=CDS;product=lipoprotein;protein_id=NP_687292.1;transl_table=11
NC_004116.1	RefSeq	gene	265913	266521	.	-	.	ID=gene332;Dbxref=GeneID:1013047;Name=SAG0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0258
NC_004116.1	RefSeq	CDS	265913	266521	.	-	0	ID=cds256;Parent=gene332;Dbxref=Genbank:NP_687293.1,GeneID:1013047;Name=NP_687293.1;Note=identified by match to PFAM protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=NP_687293.1;transl_table=11
NC_004116.1	RefSeq	gene	266545	267642	.	-	.	ID=gene333;Dbxref=GeneID:1013048;Name=SAG0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0259
NC_004116.1	RefSeq	CDS	266545	267642	.	-	0	ID=cds257;Parent=gene333;Dbxref=Genbank:NP_687294.1,GeneID:1013048;Name=NP_687294.1;gbkey=CDS;product=ABC transporter;protein_id=NP_687294.1;transl_table=11
NC_004116.1	RefSeq	gene	267645	268361	.	-	.	ID=gene334;Dbxref=GeneID:1013049;Name=SAG0260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0260
NC_004116.1	RefSeq	CDS	267645	268361	.	-	0	ID=cds258;Parent=gene334;Dbxref=Genbank:NP_687295.1,GeneID:1013049;Name=NP_687295.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687295.1;transl_table=11
NC_004116.1	RefSeq	gene	268657	269046	.	-	.	ID=gene335;Dbxref=GeneID:1013050;Name=SAG0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0261
NC_004116.1	RefSeq	CDS	268657	269046	.	-	0	ID=cds259;Parent=gene335;Dbxref=Genbank:NP_687296.1,GeneID:1013050;Name=NP_687296.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1381 transposase protein B;protein_id=NP_687296.1;transl_table=11
NC_004116.1	RefSeq	gene	269079	269462	.	-	.	ID=gene336;Dbxref=GeneID:1013051;Name=SAG0262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0262
NC_004116.1	RefSeq	CDS	269079	269462	.	-	0	ID=cds260;Parent=gene336;Dbxref=Genbank:NP_687297.1,GeneID:1013051;Name=NP_687297.1;Note=similar to OMNI:SP0537%3B identified by sequence similarity;gbkey=CDS;product=IS1381 transposase protein A;protein_id=NP_687297.1;transl_table=11
NC_004116.1	RefSeq	gene	269498	270013	.	-	.	ID=gene337;Dbxref=GeneID:1013052;Name=SAG0263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0263
NC_004116.1	RefSeq	CDS	269498	270013	.	-	0	ID=cds261;Parent=gene337;Dbxref=Genbank:NP_687298.1,GeneID:1013052;Name=NP_687298.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687298.1;transl_table=11
NC_004116.1	RefSeq	gene	270190	270501	.	-	.	ID=gene338;Dbxref=GeneID:1013053;Name=SAG0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0264
NC_004116.1	RefSeq	CDS	270190	270501	.	-	0	ID=cds262;Parent=gene338;Dbxref=Genbank:NP_687299.1,GeneID:1013053;Name=NP_687299.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687299.1;transl_table=11
NC_004116.1	RefSeq	gene	270693	271400	.	+	.	ID=gene339;Dbxref=GeneID:1013054;Name=SAG0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0265
NC_004116.1	RefSeq	CDS	270693	271400	.	+	0	ID=cds263;Parent=gene339;Dbxref=Genbank:NP_687300.1,GeneID:1013054;Name=NP_687300.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687300.1;transl_table=11
NC_004116.1	RefSeq	gene	271678	272826	.	+	.	ID=gene340;Dbxref=GeneID:1013055;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SAG0266
NC_004116.1	RefSeq	CDS	271678	272826	.	+	0	ID=cds264;Parent=gene340;Dbxref=Genbank:NP_687301.1,GeneID:1013055;Name=NP_687301.1;Note=identified by match to PFAM protein family HMM PF02612;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=NP_687301.1;transl_table=11
NC_004116.1	RefSeq	gene	272945	273487	.	+	.	ID=gene341;Dbxref=GeneID:1013056;Name=SAG0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0267
NC_004116.1	RefSeq	CDS	272945	273487	.	+	0	ID=cds265;Parent=gene341;Dbxref=Genbank:NP_687302.1,GeneID:1013056;Name=NP_687302.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687302.1;transl_table=11
NC_004116.1	RefSeq	gene	273800	274714	.	+	.	ID=gene342;Dbxref=GeneID:1013057;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=SAG0268
NC_004116.1	RefSeq	CDS	273800	274714	.	+	0	ID=cds266;Parent=gene342;Dbxref=Genbank:NP_687303.1,GeneID:1013057;Name=NP_687303.1;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyQ;product=glycyl-tRNA synthetase subunit alpha;protein_id=NP_687303.1;transl_table=11
NC_004116.1	RefSeq	gene	274714	275355	.	+	.	ID=gene343;Dbxref=GeneID:1013058;Name=SAG0269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0269
NC_004116.1	RefSeq	CDS	274714	275355	.	+	0	ID=cds267;Parent=gene343;Dbxref=Genbank:NP_687304.1,GeneID:1013058;Name=NP_687304.1;gbkey=CDS;product=ACP phosphodieterase;protein_id=NP_687304.1;transl_table=11
NC_004116.1	RefSeq	gene	275359	277398	.	+	.	ID=gene344;Dbxref=GeneID:1013059;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SAG0270
NC_004116.1	RefSeq	CDS	275359	277398	.	+	0	ID=cds268;Parent=gene344;Dbxref=Genbank:NP_687305.1,GeneID:1013059;Name=NP_687305.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase subunit beta;protein_id=NP_687305.1;transl_table=11
NC_004116.1	RefSeq	gene	277410	277667	.	+	.	ID=gene345;Dbxref=GeneID:1013060;Name=SAG0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0271
NC_004116.1	RefSeq	CDS	277410	277667	.	+	0	ID=cds269;Parent=gene345;Dbxref=Genbank:NP_687306.1,GeneID:1013060;Name=NP_687306.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687306.1;transl_table=11
NC_004116.1	RefSeq	gene	277756	278019	.	+	.	ID=gene346;Dbxref=GeneID:1013061;Name=SAG0272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0272
NC_004116.1	RefSeq	CDS	277756	278019	.	+	0	ID=cds270;Parent=gene346;Dbxref=Genbank:NP_687307.1,GeneID:1013061;Name=NP_687307.1;Note=similar to OMNI:NTL01SPL1075%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687307.1;transl_table=11
NC_004116.1	RefSeq	gene	278134	279642	.	+	.	ID=gene347;Dbxref=GeneID:1013062;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=SAG0273
NC_004116.1	RefSeq	CDS	278134	279642	.	+	0	ID=cds271;Parent=gene347;Dbxref=Genbank:NP_687308.1,GeneID:1013062;Name=NP_687308.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=NP_687308.1;transl_table=11
NC_004116.1	RefSeq	gene	279655	281484	.	+	.	ID=gene348;Dbxref=GeneID:1013063;Name=SAG0274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0274
NC_004116.1	RefSeq	CDS	279655	281484	.	+	0	ID=cds272;Parent=gene348;Dbxref=Genbank:NP_687309.1,GeneID:1013063;Name=NP_687309.1;Note=identified by match to PFAM protein family HMM PF01224;gbkey=CDS;product=alpha-glycerophosphate oxidase;protein_id=NP_687309.1;transl_table=11
NC_004116.1	RefSeq	gene	281496	282194	.	+	.	ID=gene349;Dbxref=GeneID:1013064;Name=glpF-1;gbkey=Gene;gene=glpF-1;gene_biotype=protein_coding;locus_tag=SAG0275
NC_004116.1	RefSeq	CDS	281496	282194	.	+	0	ID=cds273;Parent=gene349;Dbxref=Genbank:NP_687310.1,GeneID:1013064;Name=NP_687310.1;Note=identified by match to PFAM protein family HMM PF00230;gbkey=CDS;gene=glpF-1;product=glycerol uptake facilitator protein;protein_id=NP_687310.1;transl_table=11
NC_004116.1	RefSeq	gene	282282	283619	.	+	.	ID=gene350;Dbxref=GeneID:1013065;Name=SAG0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0276
NC_004116.1	RefSeq	CDS	282282	283619	.	+	0	ID=cds274;Parent=gene350;Dbxref=Genbank:NP_687311.1,GeneID:1013065;Name=NP_687311.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;product=NADH oxidase;protein_id=NP_687311.1;transl_table=11
NC_004116.1	RefSeq	gene	283610	285040	.	+	.	ID=gene351;Dbxref=GeneID:1013066;Name=SAG0277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0277
NC_004116.1	RefSeq	CDS	283610	285040	.	+	0	ID=cds275;Parent=gene351;Dbxref=Genbank:NP_687312.1,GeneID:1013066;Name=NP_687312.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687312.1;transl_table=11
NC_004116.1	RefSeq	gene	285165	287150	.	+	.	ID=gene352;Dbxref=GeneID:1013067;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=SAG0278
NC_004116.1	RefSeq	CDS	285165	287150	.	+	0	ID=cds276;Parent=gene352;Dbxref=Genbank:NP_687313.1,GeneID:1013067;Name=NP_687313.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;gene=tkt;product=transketolase;protein_id=NP_687313.1;transl_table=11
NC_004116.1	RefSeq	gene	287363	287668	.	+	.	ID=gene353;Dbxref=GeneID:1013068;Name=SAG0279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0279
NC_004116.1	RefSeq	CDS	287363	287668	.	+	0	ID=cds277;Parent=gene353;Dbxref=Genbank:NP_687314.1,GeneID:1013068;Name=NP_687314.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687314.1;transl_table=11
NC_004116.1	RefSeq	gene	287688	288422	.	+	.	ID=gene354;Dbxref=GeneID:1013069;Name=SAG0280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0280
NC_004116.1	RefSeq	CDS	287688	288422	.	+	0	ID=cds278;Parent=gene354;Dbxref=Genbank:NP_687315.1,GeneID:1013069;Name=NP_687315.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687315.1;transl_table=11
NC_004116.1	RefSeq	gene	288426	290030	.	+	.	ID=gene355;Dbxref=GeneID:1013070;Name=SAG0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0281
NC_004116.1	RefSeq	CDS	288426	290030	.	+	0	ID=cds279;Parent=gene355;Dbxref=Genbank:NP_687316.1,GeneID:1013070;Name=NP_687316.1;Note=similar to OMNI:NTL01SPL1317%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687316.1;transl_table=11
NC_004116.1	RefSeq	gene	290238	291623	.	-	.	ID=gene356;Dbxref=GeneID:1013071;Name=SAG0282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0282
NC_004116.1	RefSeq	CDS	290238	291623	.	-	0	ID=cds280;Parent=gene356;Dbxref=Genbank:NP_687317.1,GeneID:1013071;Name=NP_687317.1;Note=identified by match to PFAM protein family HMM PF00367;gbkey=CDS;product=PTS system transporter subunit IIBC;protein_id=NP_687317.1;transl_table=11
NC_004116.1	RefSeq	gene	291764	292567	.	+	.	ID=gene357;Dbxref=GeneID:1013072;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=SAG0283
NC_004116.1	RefSeq	CDS	291764	292567	.	+	0	ID=cds281;Parent=gene357;Dbxref=Genbank:NP_687318.1,GeneID:1013072;Name=NP_687318.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;gene=proB;product=gamma-glutamyl kinase;protein_id=NP_687318.1;transl_table=11
NC_004116.1	RefSeq	gene	292577	293830	.	+	.	ID=gene358;Dbxref=GeneID:1013073;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=SAG0284
NC_004116.1	RefSeq	CDS	292577	293830	.	+	0	ID=cds282;Parent=gene358;Dbxref=Genbank:NP_687319.1,GeneID:1013073;Name=NP_687319.1;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=NP_687319.1;transl_table=11
NC_004116.1	RefSeq	gene	293913	294860	.	+	.	ID=gene359;Dbxref=GeneID:1013074;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=SAG0285
NC_004116.1	RefSeq	CDS	293913	294860	.	+	0	ID=cds283;Parent=gene359;Dbxref=Genbank:NP_687320.2,GeneID:1013074;Name=NP_687320.2;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=NP_687320.2;transl_table=11
NC_004116.1	RefSeq	gene	294875	295201	.	+	.	ID=gene360;Dbxref=GeneID:1013075;Name=SAG0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0286
NC_004116.1	RefSeq	CDS	294875	295201	.	+	0	ID=cds284;Parent=gene360;Dbxref=Genbank:NP_687321.1,GeneID:1013075;Name=NP_687321.1;Note=similar to OMNI:SP0335%3B identified by sequence similarity;gbkey=CDS;product=cell division protein FtsL;protein_id=NP_687321.1;transl_table=11
NC_004116.1	RefSeq	gene	295205	297463	.	+	.	ID=gene361;Dbxref=GeneID:1013076;Name=pbpX;gbkey=Gene;gene=pbpX;gene_biotype=protein_coding;locus_tag=SAG0287
NC_004116.1	RefSeq	CDS	295205	297463	.	+	0	ID=cds285;Parent=gene361;Dbxref=Genbank:NP_687322.1,GeneID:1013076;Name=NP_687322.1;Note=identified by match to PFAM protein family HMM PF00905;gbkey=CDS;gene=pbpX;product=penicillin-binding protein 2X;protein_id=NP_687322.1;transl_table=11
NC_004116.1	RefSeq	gene	297465	298475	.	+	.	ID=gene362;Dbxref=GeneID:1013077;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SAG0288
NC_004116.1	RefSeq	CDS	297465	298475	.	+	0	ID=cds286;Parent=gene362;Dbxref=Genbank:NP_687323.1,GeneID:1013077;Name=NP_687323.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=NP_687323.1;transl_table=11
NC_004116.1	RefSeq	gene	298573	299916	.	+	.	ID=gene363;Dbxref=GeneID:1013078;Name=SAG0289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0289
NC_004116.1	RefSeq	CDS	298573	299916	.	+	0	ID=cds287;Parent=gene363;Dbxref=Genbank:NP_687324.1,GeneID:1013078;Name=NP_687324.1;Note=identified by match to PFAM protein family HMM PF00270;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=NP_687324.1;transl_table=11
NC_004116.1	RefSeq	gene	300054	300866	.	+	.	ID=gene364;Dbxref=GeneID:1013079;Name=SAG0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0290
NC_004116.1	RefSeq	CDS	300054	300866	.	+	0	ID=cds288;Parent=gene364;Dbxref=Genbank:NP_687325.1,GeneID:1013079;Name=NP_687325.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=NP_687325.1;transl_table=11
NC_004116.1	RefSeq	gene	300961	301764	.	+	.	ID=gene365;Dbxref=GeneID:1013080;Name=SAG0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0291
NC_004116.1	RefSeq	CDS	300961	301764	.	+	0	ID=cds289;Parent=gene365;Dbxref=Genbank:NP_687326.1,GeneID:1013080;Name=NP_687326.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687326.1;transl_table=11
NC_004116.1	RefSeq	gene	301764	302507	.	+	.	ID=gene366;Dbxref=GeneID:1013081;Name=SAG0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0292
NC_004116.1	RefSeq	CDS	301764	302507	.	+	0	ID=cds290;Parent=gene366;Dbxref=Genbank:NP_687327.1,GeneID:1013081;Name=NP_687327.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_687327.1;transl_table=11
NC_004116.1	RefSeq	gene	302629	302853	.	+	.	ID=gene367;Dbxref=GeneID:1013082;Name=SAG0293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0293
NC_004116.1	RefSeq	CDS	302629	302853	.	+	0	ID=cds291;Parent=gene367;Dbxref=Genbank:NP_687328.1,GeneID:1013082;Name=NP_687328.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687328.1;transl_table=11
NC_004116.1	RefSeq	gene	302922	303836	.	+	.	ID=gene368;Dbxref=GeneID:1013083;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=SAG0294
NC_004116.1	RefSeq	CDS	302922	303836	.	+	0	ID=cds292;Parent=gene368;Dbxref=Genbank:NP_687329.1,GeneID:1013083;Name=NP_687329.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;gene=trxB;product=thioredoxin reductase;protein_id=NP_687329.1;transl_table=11
NC_004116.1	RefSeq	gene	303994	305454	.	+	.	ID=gene369;Dbxref=GeneID:1013084;Name=SAG0295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0295
NC_004116.1	RefSeq	CDS	303994	305454	.	+	0	ID=cds293;Parent=gene369;Dbxref=Genbank:NP_687330.1,GeneID:1013084;Name=NP_687330.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=NP_687330.1;transl_table=11
NC_004116.1	RefSeq	gene	305451	306272	.	+	.	ID=gene370;Dbxref=GeneID:1013085;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SAG0296
NC_004116.1	RefSeq	CDS	305451	306272	.	+	0	ID=cds294;Parent=gene370;Dbxref=Genbank:NP_687331.1,GeneID:1013085;Name=NP_687331.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=NP_687331.1;transl_table=11
NC_004116.1	RefSeq	gene	306385	307719	.	+	.	ID=gene371;Dbxref=GeneID:1013086;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=SAG0297
NC_004116.1	RefSeq	CDS	306385	307719	.	+	0	ID=cds295;Parent=gene371;Dbxref=Genbank:NP_687332.1,GeneID:1013086;Name=NP_687332.1;Note=identified by match to PFAM protein family HMM PF03051;gbkey=CDS;gene=pepC;product=aminopeptidase;protein_id=NP_687332.1;transl_table=11
NC_004116.1	RefSeq	gene	307765	310017	.	-	.	ID=gene372;Dbxref=GeneID:1013087;Name=pbp1A;gbkey=Gene;gene=pbp1A;gene_biotype=protein_coding;locus_tag=SAG0298
NC_004116.1	RefSeq	CDS	307765	310017	.	-	0	ID=cds296;Parent=gene372;Dbxref=Genbank:NP_687333.1,GeneID:1013087;Name=NP_687333.1;Note=identified by match to PFAM protein family HMM PF00905;gbkey=CDS;gene=pbp1A;product=penicillin-binding protein 1A;protein_id=NP_687333.1;transl_table=11
NC_004116.1	RefSeq	gene	310004	310603	.	-	.	ID=gene373;Dbxref=GeneID:1013088;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=SAG0299
NC_004116.1	RefSeq	CDS	310004	310603	.	-	0	ID=cds297;Parent=gene373;Dbxref=Genbank:NP_687334.1,GeneID:1013088;Name=NP_687334.1;Note=functions in homologous recombination%2C DNA repair%2C and chromosome segregation%3B binds preferentially to three- and four-stranded DNA intermediates%3B introduces specific nick sites in four-stranded DNA substrates%3B functions similarly to Escherichia coli RuvC;gbkey=CDS;gene=recU;product=Holliday junction-specific endonuclease;protein_id=NP_687334.1;transl_table=11
NC_004116.1	RefSeq	gene	310678	311196	.	+	.	ID=gene374;Dbxref=GeneID:1013089;Name=SAG0300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0300
NC_004116.1	RefSeq	CDS	310678	311196	.	+	0	ID=cds298;Parent=gene374;Dbxref=Genbank:NP_687335.1,GeneID:1013089;Name=NP_687335.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687335.1;transl_table=11
NC_004116.1	RefSeq	gene	311177	311299	.	+	.	ID=gene375;Dbxref=GeneID:1013090;Name=SAG0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0301
NC_004116.1	RefSeq	CDS	311177	311299	.	+	0	ID=cds299;Parent=gene375;Dbxref=Genbank:NP_687336.1,GeneID:1013090;Name=NP_687336.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687336.1;transl_table=11
NC_004116.1	RefSeq	gene	311317	311649	.	+	.	ID=gene376;Dbxref=GeneID:1013091;Name=SAG0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0302
NC_004116.1	RefSeq	CDS	311317	311649	.	+	0	ID=cds300;Parent=gene376;Dbxref=Genbank:NP_687337.1,GeneID:1013091;Name=NP_687337.1;Note=GpsB%3B guiding PBP1 shuttling%3B similar to DivIVA;gbkey=CDS;product=cell division protein GpsB;protein_id=NP_687337.1;transl_table=11
NC_004116.1	RefSeq	gene	312119	313273	.	+	.	ID=gene377;Dbxref=GeneID:1013092;Name=SAG0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0303
NC_004116.1	RefSeq	CDS	312119	313273	.	+	0	ID=cds301;Parent=gene377;Dbxref=Genbank:NP_687338.1,GeneID:1013092;Name=NP_687338.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687338.1;transl_table=11
NC_004116.1	RefSeq	gene	313286	314749	.	+	.	ID=gene378;Dbxref=GeneID:1013093;Name=SAG0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0304
NC_004116.1	RefSeq	CDS	313286	314749	.	+	0	ID=cds302;Parent=gene378;Dbxref=Genbank:NP_687339.1,GeneID:1013093;Name=NP_687339.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687339.1;transl_table=11
NC_004116.1	RefSeq	gene	314974	315456	.	-	.	ID=gene379;Dbxref=GeneID:1013094;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=SAG0305
NC_004116.1	RefSeq	CDS	314974	315456	.	-	0	ID=cds303;Parent=gene379;Dbxref=Genbank:NP_687340.1,GeneID:1013094;Name=NP_687340.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;gene=luxS;product=S-ribosylhomocysteinase;protein_id=NP_687340.1;transl_table=11
NC_004116.1	RefSeq	gene	315645	317252	.	+	.	ID=gene380;Dbxref=GeneID:1013095;Name=SAG0306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0306
NC_004116.1	RefSeq	CDS	315645	317252	.	+	0	ID=cds304;Parent=gene380;Dbxref=Genbank:NP_687341.1,GeneID:1013095;Name=NP_687341.1;Note=identified by match to PFAM protein family HMM PF00013;gbkey=CDS;product=hypothetical protein;protein_id=NP_687341.1;transl_table=11
NC_004116.1	RefSeq	gene	317299	317400	.	+	.	ID=gene381;Dbxref=GeneID:1013096;Name=SAG0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0307
NC_004116.1	RefSeq	CDS	317299	317400	.	+	0	ID=cds305;Parent=gene381;Dbxref=Genbank:NP_687342.1,GeneID:1013096;Name=NP_687342.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687342.1;transl_table=11
NC_004116.1	RefSeq	gene	317381	318277	.	+	.	ID=gene382;Dbxref=GeneID:1013097;Name=SAG0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0308
NC_004116.1	RefSeq	CDS	317381	318277	.	+	0	ID=cds306;Parent=gene382;Dbxref=Genbank:NP_687343.1,GeneID:1013097;Name=NP_687343.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687343.1;transl_table=11
NC_004116.1	RefSeq	gene	318264	319004	.	+	.	ID=gene383;Dbxref=GeneID:1013098;Name=SAG0309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0309
NC_004116.1	RefSeq	CDS	318264	319004	.	+	0	ID=cds307;Parent=gene383;Dbxref=Genbank:NP_687344.1,GeneID:1013098;Name=NP_687344.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687344.1;transl_table=11
NC_004116.1	RefSeq	gene	319001	320086	.	+	.	ID=gene384;Dbxref=GeneID:1013099;Name=SAG0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0310
NC_004116.1	RefSeq	CDS	319001	320086	.	+	0	ID=cds308;Parent=gene384;Dbxref=Genbank:NP_687345.1,GeneID:1013099;Name=NP_687345.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687345.1;transl_table=11
NC_004116.1	RefSeq	gene	320088	320678	.	+	.	ID=gene385;Dbxref=GeneID:1013100;Name=SAG0311;Note=This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP2000%3B identified by sequence similarity%3B DNA-binding response regulator%2C authentic point mutation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0311
NC_004116.1	RefSeq	gene	320728	321432	.	+	.	ID=gene386;Dbxref=GeneID:1013101;Name=SAG0312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0312
NC_004116.1	RefSeq	CDS	320728	321432	.	+	0	ID=cds309;Parent=gene386;Dbxref=Genbank:NP_687346.1,GeneID:1013101;Name=NP_687346.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687346.1;transl_table=11
NC_004116.1	RefSeq	gene	321599	322228	.	+	.	ID=gene387;Dbxref=GeneID:1013102;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SAG0313
NC_004116.1	RefSeq	CDS	321599	322228	.	+	0	ID=cds310;Parent=gene387;Dbxref=Genbank:NP_687347.1,GeneID:1013102;Name=NP_687347.1;Note=Essential for recycling GMP and indirectly%2C cGMP;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=NP_687347.1;transl_table=11
NC_004116.1	RefSeq	gene	322251	322565	.	+	.	ID=gene388;Dbxref=GeneID:1013103;Name=SAG0314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0314
NC_004116.1	RefSeq	CDS	322251	322565	.	+	0	ID=cds311;Parent=gene388;Dbxref=Genbank:NP_687348.1,GeneID:1013103;Name=NP_687348.1;Note=Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;product=DNA-directed RNA polymerase subunit omega;protein_id=NP_687348.1;transl_table=11
NC_004116.1	RefSeq	gene	322639	325029	.	+	.	ID=gene389;Dbxref=GeneID:1013104;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=SAG0315
NC_004116.1	RefSeq	CDS	322639	325029	.	+	0	ID=cds312;Parent=gene389;Dbxref=Genbank:NP_687349.1,GeneID:1013104;Name=NP_687349.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;gene=priA;product=primosome assembly protein PriA;protein_id=NP_687349.1;transl_table=11
NC_004116.1	RefSeq	gene	325076	326011	.	+	.	ID=gene390;Dbxref=GeneID:1013105;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SAG0316
NC_004116.1	RefSeq	CDS	325076	326011	.	+	0	ID=cds313;Parent=gene390;Dbxref=Genbank:NP_687350.1,GeneID:1013105;Name=NP_687350.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=NP_687350.1;transl_table=11
NC_004116.1	RefSeq	gene	326001	327323	.	+	.	ID=gene391;Dbxref=GeneID:1013106;Name=sun;gbkey=Gene;gene=sun;gene_biotype=protein_coding;locus_tag=SAG0317
NC_004116.1	RefSeq	CDS	326001	327323	.	+	0	ID=cds314;Parent=gene391;Dbxref=Genbank:NP_687351.1,GeneID:1013106;Name=NP_687351.1;Note=identified by match to PFAM protein family HMM PF01029;gbkey=CDS;gene=sun;product=sun protein;protein_id=NP_687351.1;transl_table=11
NC_004116.1	RefSeq	gene	327361	328098	.	+	.	ID=gene392;Dbxref=GeneID:1013107;Name=SAG0318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0318
NC_004116.1	RefSeq	CDS	327361	328098	.	+	0	ID=cds315;Parent=gene392;Dbxref=Genbank:NP_687352.1,GeneID:1013107;Name=NP_687352.1;Note=identified by match to PFAM protein family HMM PF00481;gbkey=CDS;product=serine/threonine phosphatase;protein_id=NP_687352.1;transl_table=11
NC_004116.1	RefSeq	gene	328098	330053	.	+	.	ID=gene393;Dbxref=GeneID:1013108;Name=SAG0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0319
NC_004116.1	RefSeq	CDS	328098	330053	.	+	0	ID=cds316;Parent=gene393;Dbxref=Genbank:NP_687353.1,GeneID:1013108;Name=NP_687353.1;Note=identified by match to PFAM protein family HMM PF00069;gbkey=CDS;product=serine/threonine protein kinase;protein_id=NP_687353.1;transl_table=11
NC_004116.1	RefSeq	gene	330214	330909	.	+	.	ID=gene394;Dbxref=GeneID:1013109;Name=SAG0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0320
NC_004116.1	RefSeq	CDS	330214	330909	.	+	0	ID=cds317;Parent=gene394;Dbxref=Genbank:NP_687354.1,GeneID:1013109;Name=NP_687354.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687354.1;transl_table=11
NC_004116.1	RefSeq	gene	330906	331925	.	+	.	ID=gene395;Dbxref=GeneID:1013110;Name=SAG0321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0321
NC_004116.1	RefSeq	CDS	330906	331925	.	+	0	ID=cds318;Parent=gene395;Dbxref=Genbank:NP_687355.1,GeneID:1013110;Name=NP_687355.1;Note=identified by match to PFAM protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_687355.1;transl_table=11
NC_004116.1	RefSeq	gene	331918	332559	.	+	.	ID=gene396;Dbxref=GeneID:1013111;Name=SAG0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0322
NC_004116.1	RefSeq	CDS	331918	332559	.	+	0	ID=cds319;Parent=gene396;Dbxref=Genbank:NP_687356.1,GeneID:1013111;Name=NP_687356.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_687356.1;transl_table=11
NC_004116.1	RefSeq	gene	332601	334001	.	+	.	ID=gene397;Dbxref=GeneID:1013112;Name=SAG0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0323
NC_004116.1	RefSeq	CDS	332601	334001	.	+	0	ID=cds320;Parent=gene397;Dbxref=Genbank:NP_687357.1,GeneID:1013112;Name=NP_687357.1;Note=identified by match to PFAM protein family HMM PF00160;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=NP_687357.1;transl_table=11
NC_004116.1	RefSeq	gene	333985	334359	.	+	.	ID=gene398;Dbxref=GeneID:1013113;Name=SAG0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0324
NC_004116.1	RefSeq	CDS	333985	334359	.	+	0	ID=cds321;Parent=gene398;Dbxref=Genbank:NP_687358.1,GeneID:1013113;Name=NP_687358.1;Note=identified by match to PFAM protein family HMM PF00575;gbkey=CDS;product=hypothetical protein;protein_id=NP_687358.1;transl_table=11
NC_004116.1	RefSeq	gene	334406	335182	.	-	.	ID=gene399;Dbxref=GeneID:1013114;Name=pflA-1;gbkey=Gene;gene=pflA-1;gene_biotype=protein_coding;locus_tag=SAG0325
NC_004116.1	RefSeq	CDS	334406	335182	.	-	0	ID=cds322;Parent=gene399;Dbxref=Genbank:NP_687359.1,GeneID:1013114;Name=NP_687359.1;Note=identified by match to PFAM protein family HMM PF02143;gbkey=CDS;gene=pflA-1;product=pyruvate formate-lyase-activating enzyme;protein_id=NP_687359.1;transl_table=11
NC_004116.1	RefSeq	gene	335303	336058	.	+	.	ID=gene400;Dbxref=GeneID:1013115;Name=SAG0326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0326
NC_004116.1	RefSeq	CDS	335303	336058	.	+	0	ID=cds323;Parent=gene400;Dbxref=Genbank:NP_687360.1,GeneID:1013115;Name=NP_687360.1;Note=identified by match to PFAM protein family HMM PF00455;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=NP_687360.1;transl_table=11
NC_004116.1	RefSeq	gene	336177	337160	.	+	.	ID=gene401;Dbxref=GeneID:1013116;Name=SAG0327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0327
NC_004116.1	RefSeq	CDS	336177	337160	.	+	0	ID=cds324;Parent=gene401;Dbxref=Genbank:NP_687361.1,GeneID:1013116;Name=NP_687361.1;gbkey=CDS;product=transcriptional regulator;protein_id=NP_687361.1;transl_table=11
NC_004116.1	RefSeq	gene	337364	337687	.	+	.	ID=gene402;Dbxref=GeneID:1013117;Name=celC;gbkey=Gene;gene=celC;gene_biotype=protein_coding;locus_tag=SAG0328
NC_004116.1	RefSeq	CDS	337364	337687	.	+	0	ID=cds325;Parent=gene402;Dbxref=Genbank:NP_687362.1,GeneID:1013117;Name=NP_687362.1;Note=identified by match to PFAM protein family HMM PF02255;gbkey=CDS;gene=celC;product=PTS system cellobiose-specific transporter subunit IIA;protein_id=NP_687362.1;transl_table=11
NC_004116.1	RefSeq	gene	337704	338024	.	+	.	ID=gene403;Dbxref=GeneID:1013118;Name=SAG0329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0329
NC_004116.1	RefSeq	CDS	337704	338024	.	+	0	ID=cds326;Parent=gene403;Dbxref=Genbank:NP_687363.1,GeneID:1013118;Name=NP_687363.1;Note=identified by match to PFAM protein family HMM PF02302;gbkey=CDS;product=PTS system cellobiose-specific transporter subunit IIB;protein_id=NP_687363.1;transl_table=11
NC_004116.1	RefSeq	gene	338026	339327	.	+	.	ID=gene404;Dbxref=GeneID:1013119;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=SAG0330
NC_004116.1	RefSeq	CDS	338026	339327	.	+	0	ID=cds327;Parent=gene404;Dbxref=Genbank:NP_687364.1,GeneID:1013119;Name=NP_687364.1;Note=identified by match to PFAM protein family HMM PF02378;gbkey=CDS;gene=celB;product=PTS system cellobiose-specific transporter subunit IIC;protein_id=NP_687364.1;transl_table=11
NC_004116.1	RefSeq	gene	339508	341964	.	+	.	ID=gene405;Dbxref=GeneID:1013120;Name=pflD-1;gbkey=Gene;gene=pflD-1;gene_biotype=protein_coding;locus_tag=SAG0331
NC_004116.1	RefSeq	CDS	339508	341964	.	+	0	ID=cds328;Parent=gene405;Dbxref=Genbank:NP_687365.1,GeneID:1013120;Name=NP_687365.1;Note=identified by match to PFAM protein family HMM PF01228;gbkey=CDS;gene=pflD-1;product=formate acetyltransferase;protein_id=NP_687365.1;transl_table=11
NC_004116.1	RefSeq	gene	341974	342642	.	+	.	ID=gene406;Dbxref=GeneID:1013121;Name=SAG0332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0332
NC_004116.1	RefSeq	CDS	341974	342642	.	+	0	ID=cds329;Parent=gene406;Dbxref=Genbank:NP_687366.1,GeneID:1013121;Name=NP_687366.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=NP_687366.1;transl_table=11
NC_004116.1	RefSeq	gene	342710	343798	.	+	.	ID=gene407;Dbxref=GeneID:1013122;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=SAG0333
NC_004116.1	RefSeq	CDS	342710	343798	.	+	0	ID=cds330;Parent=gene407;Dbxref=Genbank:NP_687367.1,GeneID:1013122;Name=NP_687367.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;product=glycerol dehydrogenase;protein_id=NP_687367.1;transl_table=11
NC_004116.1	RefSeq	gene	343950	344876	.	-	.	ID=gene408;Dbxref=GeneID:1013123;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=SAG0334
NC_004116.1	RefSeq	CDS	343950	344876	.	-	0	ID=cds331;Parent=gene408;Dbxref=Genbank:NP_687368.1,GeneID:1013123;Name=NP_687368.1;Note=identified by match to PFAM protein family HMM PF00291;gbkey=CDS;gene=cysK;product=cysteine synthase A;protein_id=NP_687368.1;transl_table=11
NC_004116.1	RefSeq	gene	344967	345611	.	-	.	ID=gene409;Dbxref=GeneID:1013124;Name=SAG0335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0335
NC_004116.1	RefSeq	CDS	344967	345611	.	-	0	ID=cds332;Parent=gene409;Dbxref=Genbank:NP_687369.1,GeneID:1013124;Name=NP_687369.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687369.1;transl_table=11
NC_004116.1	RefSeq	gene	345667	346956	.	+	.	ID=gene410;Dbxref=GeneID:1013125;Name=SAG0336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0336
NC_004116.1	RefSeq	CDS	345667	346956	.	+	0	ID=cds333;Parent=gene410;Dbxref=Genbank:NP_687370.1,GeneID:1013125;Name=NP_687370.1;Note=identified by match to PFAM protein family HMM PF00270;gbkey=CDS;product=helicase;protein_id=NP_687370.1;transl_table=11
NC_004116.1	RefSeq	gene	346956	347621	.	+	.	ID=gene411;Dbxref=GeneID:1013126;Name=SAG0337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0337
NC_004116.1	RefSeq	CDS	346956	347621	.	+	0	ID=cds334;Parent=gene411;Dbxref=Genbank:NP_687371.1,GeneID:1013126;Name=NP_687371.1;gbkey=CDS;product=competence protein F;protein_id=NP_687371.1;transl_table=11
NC_004116.1	RefSeq	gene	347698	348252	.	+	.	ID=gene412;Dbxref=GeneID:1013127;Name=yfiA;gbkey=Gene;gene=yfiA;gene_biotype=protein_coding;locus_tag=SAG0338
NC_004116.1	RefSeq	CDS	347698	348252	.	+	0	ID=cds335;Parent=gene412;Dbxref=Genbank:NP_687372.1,GeneID:1013127;Name=NP_687372.1;Note=identified by match to PFAM protein family HMM PF02482;gbkey=CDS;gene=yfiA;product=ribosomal subunit interface protein;protein_id=NP_687372.1;transl_table=11
NC_004116.1	RefSeq	gene	348575	350125	.	+	.	ID=gene413;Dbxref=GeneID:1013128;Name=Sa16SF;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SF
NC_004116.1	RefSeq	rRNA	348575	350125	.	+	.	ID=rna75;Parent=gene413;Dbxref=GeneID:1013128;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	348575	350125	.	+	.	ID=id76;Parent=rna75;Dbxref=GeneID:1013128;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	350178	350250	.	+	.	ID=gene414;Dbxref=GeneID:1013129;Name=tRNA-Ala-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-5
NC_004116.1	RefSeq	tRNA	350178	350250	.	+	.	ID=rna76;Parent=gene414;Dbxref=GeneID:1013129;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	350178	350250	.	+	.	ID=id77;Parent=rna76;Dbxref=GeneID:1013129;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	350405	353307	.	+	.	ID=gene415;Dbxref=GeneID:1013130;Name=Sa23SF;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SF
NC_004116.1	RefSeq	rRNA	350405	353307	.	+	.	ID=rna77;Parent=gene415;Dbxref=GeneID:1013130;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	350405	353307	.	+	.	ID=id78;Parent=rna77;Dbxref=GeneID:1013130;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	353381	353497	.	+	.	ID=gene416;Dbxref=GeneID:1013131;Name=Sa5SF;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa5SF
NC_004116.1	RefSeq	rRNA	353381	353497	.	+	.	ID=rna78;Parent=gene416;Dbxref=GeneID:1013131;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	353381	353497	.	+	.	ID=id79;Parent=rna78;Dbxref=GeneID:1013131;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	353503	353576	.	+	.	ID=gene417;Dbxref=GeneID:1013132;Name=tRNA-Asn-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Asn-3
NC_004116.1	RefSeq	tRNA	353503	353576	.	+	.	ID=rna79;Parent=gene417;Dbxref=GeneID:1013132;gbkey=tRNA;product=tRNA-Asn
NC_004116.1	RefSeq	exon	353503	353576	.	+	.	ID=id80;Parent=rna79;Dbxref=GeneID:1013132;gbkey=tRNA;product=tRNA-Asn
NC_004116.1	RefSeq	gene	353792	355144	.	-	.	ID=gene418;Dbxref=GeneID:1013133;Name=SAG0339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0339
NC_004116.1	RefSeq	CDS	353792	355144	.	-	0	ID=cds336;Parent=gene418;Dbxref=Genbank:NP_687373.1,GeneID:1013133;Name=NP_687373.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B lysine and threonine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=NP_687373.1;transl_table=11
NC_004116.1	RefSeq	gene	355238	355888	.	+	.	ID=gene419;Dbxref=GeneID:1013134;Name=SAG0340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0340
NC_004116.1	RefSeq	CDS	355238	355888	.	+	0	ID=cds337;Parent=gene419;Dbxref=Genbank:NP_687374.1,GeneID:1013134;Name=NP_687374.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687374.1;transl_table=11
NC_004116.1	RefSeq	gene	355874	356023	.	-	.	ID=gene420;Dbxref=GeneID:1013135;Name=SAG0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0341
NC_004116.1	RefSeq	CDS	355874	356023	.	-	0	ID=cds338;Parent=gene420;Dbxref=Genbank:NP_687375.1,GeneID:1013135;Name=NP_687375.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687375.1;transl_table=11
NC_004116.1	RefSeq	gene	356025	356816	.	+	.	ID=gene421;Dbxref=GeneID:1013136;Name=SAG0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0342
NC_004116.1	RefSeq	CDS	356025	356816	.	+	0	ID=cds339;Parent=gene421;Dbxref=Genbank:NP_687376.1,GeneID:1013136;Name=NP_687376.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=NP_687376.1;transl_table=11
NC_004116.1	RefSeq	gene	356912	357346	.	+	.	ID=gene422;Dbxref=GeneID:1013137;Name=SAG0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0343
NC_004116.1	RefSeq	CDS	356912	357346	.	+	0	ID=cds340;Parent=gene422;Dbxref=Genbank:NP_687377.1,GeneID:1013137;Name=NP_687377.1;Note=identified by match to PFAM protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=NP_687377.1;transl_table=11
NC_004116.1	RefSeq	gene	357346	358317	.	+	.	ID=gene423;Dbxref=GeneID:1013138;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=SAG0344
NC_004116.1	RefSeq	CDS	357346	358317	.	+	0	ID=cds341;Parent=gene423;Dbxref=Genbank:NP_687378.1,GeneID:1013138;Name=NP_687378.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=fabH;product=3-oxoacyl-ACP synthase;protein_id=NP_687378.1;transl_table=11
NC_004116.1	RefSeq	gene	358375	358599	.	+	.	ID=gene424;Dbxref=GeneID:1013139;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=SAG0345
NC_004116.1	RefSeq	CDS	358375	358599	.	+	0	ID=cds342;Parent=gene424;Dbxref=Genbank:NP_687379.1,GeneID:1013139;Name=NP_687379.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=NP_687379.1;transl_table=11
NC_004116.1	RefSeq	gene	358754	359713	.	+	.	ID=gene425;Dbxref=GeneID:1013140;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=SAG0346
NC_004116.1	RefSeq	CDS	358754	359713	.	+	0	ID=cds343;Parent=gene425;Dbxref=Genbank:NP_687380.1,GeneID:1013140;Name=NP_687380.1;Note=identified by match to PFAM protein family HMM PF03060;gbkey=CDS;gene=fabK;product=enoyl-ACP reductase;protein_id=NP_687380.1;transl_table=11
NC_004116.1	RefSeq	gene	359733	360659	.	+	.	ID=gene426;Dbxref=GeneID:1013141;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=SAG0347
NC_004116.1	RefSeq	CDS	359733	360659	.	+	0	ID=cds344;Parent=gene426;Dbxref=Genbank:NP_687381.1,GeneID:1013141;Name=NP_687381.1;Note=identified by match to PFAM protein family HMM PF00698;gbkey=CDS;gene=fabD;product=ACP S-malonyltransferase;protein_id=NP_687381.1;transl_table=11
NC_004116.1	RefSeq	gene	360668	361402	.	+	.	ID=gene427;Dbxref=GeneID:1013142;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SAG0348
NC_004116.1	RefSeq	CDS	360668	361402	.	+	0	ID=cds345;Parent=gene427;Dbxref=Genbank:NP_687382.1,GeneID:1013142;Name=NP_687382.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=NP_687382.1;transl_table=11
NC_004116.1	RefSeq	gene	361418	362650	.	+	.	ID=gene428;Dbxref=GeneID:1013143;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=SAG0349
NC_004116.1	RefSeq	CDS	361418	362650	.	+	0	ID=cds346;Parent=gene428;Dbxref=Genbank:NP_687383.1,GeneID:1013143;Name=NP_687383.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;gene=fabF;product=3-oxoacyl-ACP synthase;protein_id=NP_687383.1;transl_table=11
NC_004116.1	RefSeq	gene	362652	363152	.	+	.	ID=gene429;Dbxref=GeneID:1013144;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=SAG0350
NC_004116.1	RefSeq	CDS	362652	363152	.	+	0	ID=cds347;Parent=gene429;Dbxref=Genbank:NP_687384.1,GeneID:1013144;Name=NP_687384.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;gene=accB;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=NP_687384.1;transl_table=11
NC_004116.1	RefSeq	gene	363149	363571	.	+	.	ID=gene430;Dbxref=GeneID:1013145;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=SAG0351
NC_004116.1	RefSeq	CDS	363149	363571	.	+	0	ID=cds348;Parent=gene430;Dbxref=Genbank:NP_687385.1,GeneID:1013145;Name=NP_687385.1;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP;gbkey=CDS;gene=fabZ;product=(3R)-hydroxymyristoyl-ACP dehydratase;protein_id=NP_687385.1;transl_table=11
NC_004116.1	RefSeq	gene	363609	364979	.	+	.	ID=gene431;Dbxref=GeneID:1013146;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=SAG0352
NC_004116.1	RefSeq	CDS	363609	364979	.	+	0	ID=cds349;Parent=gene431;Dbxref=Genbank:NP_687386.1,GeneID:1013146;Name=NP_687386.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;gene=accC;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=NP_687386.1;transl_table=11
NC_004116.1	RefSeq	gene	364988	365863	.	+	.	ID=gene432;Dbxref=GeneID:1013147;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=SAG0353
NC_004116.1	RefSeq	CDS	364988	365863	.	+	0	ID=cds350;Parent=gene432;Dbxref=Genbank:NP_687387.1,GeneID:1013147;Name=NP_687387.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;gene=accD;product=acetyl-CoA carboxylase subunit beta;protein_id=NP_687387.1;transl_table=11
NC_004116.1	RefSeq	gene	365856	366629	.	+	.	ID=gene433;Dbxref=GeneID:1013148;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=SAG0354
NC_004116.1	RefSeq	CDS	365856	366629	.	+	0	ID=cds351;Parent=gene433;Dbxref=Genbank:NP_687388.1,GeneID:1013148;Name=NP_687388.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein%3B these proteins present a shorter N-terminus;gbkey=CDS;gene=accA;product=acetyl-CoA carboxylase subunit alpha;protein_id=NP_687388.1;transl_table=11
NC_004116.1	RefSeq	gene	367099	367731	.	+	.	ID=gene434;Dbxref=GeneID:1013149;Name=SAG0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0355
NC_004116.1	RefSeq	CDS	367099	367731	.	+	0	ID=cds352;Parent=gene434;Dbxref=Genbank:NP_687389.1,GeneID:1013149;Name=NP_687389.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687389.1;transl_table=11
NC_004116.1	RefSeq	gene	367777	369054	.	-	.	ID=gene435;Dbxref=GeneID:1013150;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=SAG0356
NC_004116.1	RefSeq	CDS	367777	369054	.	-	0	ID=cds353;Parent=gene435;Dbxref=Genbank:NP_687390.1,GeneID:1013150;Name=NP_687390.1;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=NP_687390.1;transl_table=11
NC_004116.1	RefSeq	gene	369420	370412	.	+	.	ID=gene436;Dbxref=GeneID:1013151;Name=SAG0357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0357
NC_004116.1	RefSeq	CDS	369420	370412	.	+	0	ID=cds354;Parent=gene436;Dbxref=Genbank:NP_687391.1,GeneID:1013151;Name=NP_687391.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687391.1;transl_table=11
NC_004116.1	RefSeq	gene	370450	370812	.	-	.	ID=gene437;Dbxref=GeneID:1013152;Name=SAG0358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0358
NC_004116.1	RefSeq	CDS	370450	370812	.	-	0	ID=cds355;Parent=gene437;Dbxref=Genbank:NP_687392.1,GeneID:1013152;Name=NP_687392.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687392.1;transl_table=11
NC_004116.1	RefSeq	gene	370931	371842	.	-	.	ID=gene438;Dbxref=GeneID:1013153;Name=SAG0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0359
NC_004116.1	RefSeq	CDS	370931	371842	.	-	0	ID=cds356;Parent=gene438;Dbxref=Genbank:NP_687393.1,GeneID:1013153;Name=NP_687393.1;gbkey=CDS;product=PTS system mannose-specific transporter subunit IID;protein_id=NP_687393.1;transl_table=11
NC_004116.1	RefSeq	gene	371857	372669	.	-	.	ID=gene439;Dbxref=GeneID:1013154;Name=manM;gbkey=Gene;gene=manM;gene_biotype=protein_coding;locus_tag=SAG0360
NC_004116.1	RefSeq	CDS	371857	372669	.	-	0	ID=cds357;Parent=gene439;Dbxref=Genbank:NP_687394.1,GeneID:1013154;Name=NP_687394.1;gbkey=CDS;gene=manM;product=PTS system mannose-specific transporter subunit IIC;protein_id=NP_687394.1;transl_table=11
NC_004116.1	RefSeq	gene	372702	373712	.	-	.	ID=gene440;Dbxref=GeneID:1013155;Name=manL;gbkey=Gene;gene=manL;gene_biotype=protein_coding;locus_tag=SAG0361
NC_004116.1	RefSeq	CDS	372702	373712	.	-	0	ID=cds358;Parent=gene440;Dbxref=Genbank:NP_687395.1,GeneID:1013155;Name=NP_687395.1;gbkey=CDS;gene=manL;product=PTS system mannose-specific transporter subunit IIAB;protein_id=NP_687395.1;transl_table=11
NC_004116.1	RefSeq	gene	374015	374827	.	-	.	ID=gene441;Dbxref=GeneID:1013156;Name=SAG0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0362
NC_004116.1	RefSeq	CDS	374015	374827	.	-	0	ID=cds359;Parent=gene441;Dbxref=Genbank:NP_687396.1,GeneID:1013156;Name=NP_687396.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687396.1;transl_table=11
NC_004116.1	RefSeq	gene	374916	375500	.	+	.	ID=gene442;Dbxref=GeneID:1013157;Name=SAG0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0363
NC_004116.1	RefSeq	CDS	374916	375500	.	+	0	ID=cds360;Parent=gene442;Dbxref=Genbank:NP_687397.1,GeneID:1013157;Name=NP_687397.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687397.1;transl_table=11
NC_004116.1	RefSeq	gene	375590	376201	.	+	.	ID=gene443;Dbxref=GeneID:1013158;Name=SAG0364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0364
NC_004116.1	RefSeq	CDS	375590	376201	.	+	0	ID=cds361;Parent=gene443;Dbxref=Genbank:NP_687398.1,GeneID:1013158;Name=NP_687398.1;Note=similar to GB:AE000520%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687398.1;transl_table=11
NC_004116.1	RefSeq	gene	376304	377725	.	+	.	ID=gene444;Dbxref=GeneID:1013159;Name=SAG0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0365
NC_004116.1	RefSeq	CDS	376304	377725	.	+	0	ID=cds362;Parent=gene444;Dbxref=Genbank:NP_687399.1,GeneID:1013159;Name=NP_687399.1;Note=identified by match to PFAM protein family HMM PF00860;gbkey=CDS;product=xanthine/uracil permease family protein;protein_id=NP_687399.1;transl_table=11
NC_004116.1	RefSeq	gene	377808	378317	.	+	.	ID=gene445;Dbxref=GeneID:1013160;Name=SAG0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0366
NC_004116.1	RefSeq	CDS	377808	378317	.	+	0	ID=cds363;Parent=gene445;Dbxref=Genbank:NP_687400.1,GeneID:1013160;Name=NP_687400.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687400.1;transl_table=11
NC_004116.1	RefSeq	gene	378271	378831	.	+	.	ID=gene446;Dbxref=GeneID:1013161;Name=SAG0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0367
NC_004116.1	RefSeq	CDS	378271	378831	.	+	0	ID=cds364;Parent=gene446;Dbxref=Genbank:NP_687401.1,GeneID:1013161;Name=NP_687401.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687401.1;transl_table=11
NC_004116.1	RefSeq	gene	378840	380147	.	+	.	ID=gene447;Dbxref=GeneID:1013162;Name=SAG0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0368
NC_004116.1	RefSeq	CDS	378840	380147	.	+	0	ID=cds365;Parent=gene447;Dbxref=Genbank:NP_687402.1,GeneID:1013162;Name=NP_687402.1;Note=identified by match to TIGR protein family HMM TIGR00350%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687402.1;transl_table=11
NC_004116.1	RefSeq	gene	380211	380507	.	-	.	ID=gene448;Dbxref=GeneID:1013163;Name=SAG0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0369
NC_004116.1	RefSeq	CDS	380211	380507	.	-	0	ID=cds366;Parent=gene448;Dbxref=Genbank:NP_687403.1,GeneID:1013163;Name=NP_687403.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687403.1;transl_table=11
NC_004116.1	RefSeq	gene	380504	380923	.	-	.	ID=gene449;Dbxref=GeneID:1013164;Name=hit;gbkey=Gene;gene=hit;gene_biotype=protein_coding;locus_tag=SAG0370
NC_004116.1	RefSeq	CDS	380504	380923	.	-	0	ID=cds367;Parent=gene449;Dbxref=Genbank:NP_687404.1,GeneID:1013164;Name=NP_687404.1;Note=identified by match to PFAM protein family HMM PF01230;gbkey=CDS;gene=hit;product=HIT family protein;protein_id=NP_687404.1;transl_table=11
NC_004116.1	RefSeq	gene	381259	381762	.	+	.	ID=gene450;Dbxref=GeneID:1013165;Name=SAG0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0371
NC_004116.1	RefSeq	CDS	381259	381762	.	+	0	ID=cds368;Parent=gene450;Dbxref=Genbank:NP_687405.1,GeneID:1013165;Name=NP_687405.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687405.1;transl_table=11
NC_004116.1	RefSeq	gene	381814	382071	.	-	.	ID=gene451;Dbxref=GeneID:1013166;Name=SAG0372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0372
NC_004116.1	RefSeq	CDS	381814	382071	.	-	0	ID=cds369;Parent=gene451;Dbxref=Genbank:NP_687406.1,GeneID:1013166;Name=NP_687406.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687406.1;transl_table=11
NC_004116.1	RefSeq	gene	382071	382796	.	+	.	ID=gene452;Dbxref=GeneID:1013167;Name=SAG0373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0373
NC_004116.1	RefSeq	CDS	382071	382796	.	+	0	ID=cds370;Parent=gene452;Dbxref=Genbank:NP_687407.1,GeneID:1013167;Name=NP_687407.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687407.1;transl_table=11
NC_004116.1	RefSeq	gene	382798	383832	.	+	.	ID=gene453;Dbxref=GeneID:1013168;Name=SAG0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0374
NC_004116.1	RefSeq	CDS	382798	383832	.	+	0	ID=cds371;Parent=gene453;Dbxref=Genbank:NP_687408.1,GeneID:1013168;Name=NP_687408.1;Note=similar to OMNI:NTL01SPL1360%3B identified by sequence similarity;gbkey=CDS;product=ABC transporter permease;protein_id=NP_687408.1;transl_table=11
NC_004116.1	RefSeq	gene	383890	384690	.	+	.	ID=gene454;Dbxref=GeneID:1013169;Name=SAG0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0375
NC_004116.1	RefSeq	CDS	383890	384690	.	+	0	ID=cds372;Parent=gene454;Dbxref=Genbank:NP_687409.1,GeneID:1013169;Name=NP_687409.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687409.1;transl_table=11
NC_004116.1	RefSeq	gene	384680	385315	.	+	.	ID=gene455;Dbxref=GeneID:1013170;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=SAG0376
NC_004116.1	RefSeq	CDS	384680	385315	.	+	0	ID=cds373;Parent=gene455;Dbxref=Genbank:NP_687410.1,GeneID:1013170;Name=NP_687410.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=NP_687410.1;transl_table=11
NC_004116.1	RefSeq	gene	385359	385446	.	+	.	ID=gene456;Dbxref=GeneID:1013171;Name=tRNA-Ser-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ser-4
NC_004116.1	RefSeq	tRNA	385359	385446	.	+	.	ID=rna80;Parent=gene456;Dbxref=GeneID:1013171;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	exon	385359	385446	.	+	.	ID=id81;Parent=rna80;Dbxref=GeneID:1013171;gbkey=tRNA;product=tRNA-Ser
NC_004116.1	RefSeq	gene	385898	386281	.	+	.	ID=gene457;Dbxref=GeneID:1013172;Name=SAG0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0377
NC_004116.1	RefSeq	CDS	385898	386281	.	+	0	ID=cds374;Parent=gene457;Dbxref=Genbank:NP_687411.1,GeneID:1013172;Name=NP_687411.1;Note=in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins;gbkey=CDS;product=hypothetical protein;protein_id=NP_687411.1;transl_table=11
NC_004116.1	RefSeq	gene	386317	387468	.	+	.	ID=gene458;Dbxref=GeneID:1013173;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SAG0378
NC_004116.1	RefSeq	CDS	386317	387468	.	+	0	ID=cds375;Parent=gene458;Dbxref=Genbank:NP_687412.2,GeneID:1013173;Name=NP_687412.2;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=NP_687412.2;transl_table=11
NC_004116.1	RefSeq	gene	387490	387786	.	+	.	ID=gene459;Dbxref=GeneID:1013174;Name=SAG0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0379
NC_004116.1	RefSeq	CDS	387490	387786	.	+	0	ID=cds376;Parent=gene459;Dbxref=Genbank:NP_687413.1,GeneID:1013174;Name=NP_687413.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687413.1;transl_table=11
NC_004116.1	RefSeq	gene	387779	388081	.	+	.	ID=gene460;Dbxref=GeneID:1013175;Name=SAG0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0380
NC_004116.1	RefSeq	CDS	387779	388081	.	+	0	ID=cds377;Parent=gene460;Dbxref=Genbank:NP_687414.1,GeneID:1013175;Name=NP_687414.1;Note=identified by match to PFAM protein family HMM PF01248;gbkey=CDS;product=hypothetical protein;protein_id=NP_687414.1;transl_table=11
NC_004116.1	RefSeq	gene	388101	390884	.	+	.	ID=gene461;Dbxref=GeneID:1013176;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SAG0381
NC_004116.1	RefSeq	CDS	388101	390884	.	+	0	ID=cds378;Parent=gene461;Dbxref=Genbank:NP_687415.1,GeneID:1013176;Name=NP_687415.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=NP_687415.1;transl_table=11
NC_004116.1	RefSeq	gene	390975	391343	.	+	.	ID=gene462;Dbxref=GeneID:1013177;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SAG0382
NC_004116.1	RefSeq	CDS	390975	391343	.	+	0	ID=cds379;Parent=gene462;Dbxref=Genbank:NP_687416.1,GeneID:1013177;Name=NP_687416.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=NP_687416.1;transl_table=11
NC_004116.1	RefSeq	gene	391427	392431	.	-	.	ID=gene463;Dbxref=GeneID:1013178;Name=SAG0383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0383
NC_004116.1	RefSeq	CDS	391427	392431	.	-	0	ID=cds380;Parent=gene463;Dbxref=Genbank:NP_687417.1,GeneID:1013178;Name=NP_687417.1;Note=similar to OMNI:NTL01SPL1351%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687417.1;transl_table=11
NC_004116.1	RefSeq	gene	392595	393011	.	+	.	ID=gene464;Dbxref=GeneID:1013179;Name=SAG0384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0384
NC_004116.1	RefSeq	CDS	392595	393011	.	+	0	ID=cds381;Parent=gene464;Dbxref=Genbank:NP_687418.1,GeneID:1013179;Name=NP_687418.1;gbkey=CDS;product=transcriptional repressor CopY;protein_id=NP_687418.1;transl_table=11
NC_004116.1	RefSeq	gene	393024	395258	.	+	.	ID=gene465;Dbxref=GeneID:1013180;Name=SAG0385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0385
NC_004116.1	RefSeq	CDS	393024	395258	.	+	0	ID=cds382;Parent=gene465;Dbxref=Genbank:NP_687419.1,GeneID:1013180;Name=NP_687419.1;Note=identified by match to PFAM protein family HMM PF00122;gbkey=CDS;product=copper-transporter ATPase CopA;protein_id=NP_687419.1;transl_table=11
NC_004116.1	RefSeq	gene	395299	395505	.	+	.	ID=gene466;Dbxref=GeneID:1013181;Name=SAG0386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0386
NC_004116.1	RefSeq	CDS	395299	395505	.	+	0	ID=cds383;Parent=gene466;Dbxref=Genbank:NP_687420.1,GeneID:1013181;Name=NP_687420.1;Note=identified by match to PFAM protein family HMM PF00403;gbkey=CDS;product=copper-transporter protein CopZ;protein_id=NP_687420.1;transl_table=11
NC_004116.1	RefSeq	gene	395615	396229	.	+	.	ID=gene467;Dbxref=GeneID:1013182;Name=SAG0387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0387
NC_004116.1	RefSeq	CDS	395615	396229	.	+	0	ID=cds384;Parent=gene467;Dbxref=Genbank:NP_687421.1,GeneID:1013182;Name=NP_687421.1;Note=identified by match to PFAM protein family HMM PF03458;gbkey=CDS;product=hypothetical protein;protein_id=NP_687421.1;transl_table=11
NC_004116.1	RefSeq	gene	396244	397056	.	+	.	ID=gene468;Dbxref=GeneID:1013183;Name=SAG0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0388
NC_004116.1	RefSeq	CDS	396244	397056	.	+	0	ID=cds385;Parent=gene468;Dbxref=Genbank:NP_687422.1,GeneID:1013183;Name=NP_687422.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687422.1;transl_table=11
NC_004116.1	RefSeq	gene	397169	399811	.	+	.	ID=gene469;Dbxref=GeneID:1013184;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=SAG0389
NC_004116.1	RefSeq	CDS	397169	399811	.	+	0	ID=cds386;Parent=gene469;Dbxref=Genbank:NP_687423.1,GeneID:1013184;Name=NP_687423.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=NP_687423.1;transl_table=11
NC_004116.1	RefSeq	gene	399841	400281	.	+	.	ID=gene470;Dbxref=GeneID:1013185;Name=SAG0390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0390
NC_004116.1	RefSeq	CDS	399841	400281	.	+	0	ID=cds387;Parent=gene470;Dbxref=Genbank:NP_687424.1,GeneID:1013185;Name=NP_687424.1;Note=identified by match to PFAM protein family HMM PF02629;gbkey=CDS;product=CoA-binding domain-containing protein;protein_id=NP_687424.1;transl_table=11
NC_004116.1	RefSeq	gene	400363	400842	.	+	.	ID=gene471;Dbxref=GeneID:1013186;Name=SAG0391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0391
NC_004116.1	RefSeq	CDS	400363	400842	.	+	0	ID=cds388;Parent=gene471;Dbxref=Genbank:NP_687425.1,GeneID:1013186;Name=NP_687425.1;Note=identified by match to PFAM protein family HMM PF01475;gbkey=CDS;product=FUR family transcriptional regulator;protein_id=NP_687425.1;transl_table=11
NC_004116.1	RefSeq	gene	400995	402560	.	+	.	ID=gene472;Dbxref=GeneID:1013187;Name=SAG0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0392
NC_004116.1	RefSeq	CDS	400995	402560	.	+	0	ID=cds389;Parent=gene472;Dbxref=Genbank:NP_687426.1,GeneID:1013187;Name=NP_687426.1;Note=identified by match to PFAM protein family HMM PF00746%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_687426.1;transl_table=11
NC_004116.1	RefSeq	gene	402673	403359	.	+	.	ID=gene473;Dbxref=GeneID:1013188;Name=SAG0393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0393
NC_004116.1	RefSeq	CDS	402673	403359	.	+	0	ID=cds390;Parent=gene473;Dbxref=Genbank:NP_687427.1,GeneID:1013188;Name=NP_687427.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_687427.1;transl_table=11
NC_004116.1	RefSeq	gene	403361	404398	.	+	.	ID=gene474;Dbxref=GeneID:1013189;Name=SAG0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0394
NC_004116.1	RefSeq	CDS	403361	404398	.	+	0	ID=cds391;Parent=gene474;Dbxref=Genbank:NP_687428.1,GeneID:1013189;Name=NP_687428.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_687428.1;transl_table=11
NC_004116.1	RefSeq	gene	404412	405152	.	-	.	ID=gene475;Dbxref=GeneID:1013190;Name=SAG0395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0395
NC_004116.1	RefSeq	CDS	404412	405152	.	-	0	ID=cds392;Parent=gene475;Dbxref=Genbank:NP_687429.1,GeneID:1013190;Name=NP_687429.1;Note=similar to OMNI:NTL01SPL0158%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687429.1;transl_table=11
NC_004116.1	RefSeq	gene	405339	406481	.	+	.	ID=gene476;Dbxref=GeneID:1013191;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=SAG0396
NC_004116.1	RefSeq	CDS	405339	406481	.	+	0	ID=cds393;Parent=gene476;Dbxref=Genbank:NP_687430.1,GeneID:1013191;Name=NP_687430.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=NP_687430.1;transl_table=11
NC_004116.1	RefSeq	gene	406591	406899	.	+	.	ID=gene477;Dbxref=GeneID:1013192;Name=SAG0397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0397
NC_004116.1	RefSeq	CDS	406591	406899	.	+	0	ID=cds394;Parent=gene477;Dbxref=Genbank:NP_687431.1,GeneID:1013192;Name=NP_687431.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687431.1;transl_table=11
NC_004116.1	RefSeq	gene	406906	407445	.	+	.	ID=gene478;Dbxref=GeneID:1013193;Name=SAG0398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0398
NC_004116.1	RefSeq	CDS	406906	407445	.	+	0	ID=cds395;Parent=gene478;Dbxref=Genbank:NP_687432.1,GeneID:1013193;Name=NP_687432.1;Note=identified by match to PFAM protein family HMM PF02632;gbkey=CDS;product=BioY family protein;protein_id=NP_687432.1;transl_table=11
NC_004116.1	RefSeq	gene	407584	408360	.	+	.	ID=gene479;Dbxref=GeneID:1013194;Name=SAG0399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0399
NC_004116.1	RefSeq	CDS	407584	408360	.	+	0	ID=cds396;Parent=gene479;Dbxref=Genbank:NP_687433.1,GeneID:1013194;Name=NP_687433.1;gbkey=CDS;product=AtsA/ElaC family protein;protein_id=NP_687433.1;transl_table=11
NC_004116.1	RefSeq	gene	408360	408866	.	+	.	ID=gene480;Dbxref=GeneID:1013195;Name=SAG0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0400
NC_004116.1	RefSeq	CDS	408360	408866	.	+	0	ID=cds397;Parent=gene480;Dbxref=Genbank:NP_687434.1,GeneID:1013195;Name=NP_687434.1;Note=identified by match to PFAM protein family HMM PF00383;gbkey=CDS;product=cytidine/deoxycytidylate deaminase family protein;protein_id=NP_687434.1;transl_table=11
NC_004116.1	RefSeq	gene	408968	409102	.	+	.	ID=gene481;Dbxref=GeneID:1013196;Name=SAG0401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0401
NC_004116.1	RefSeq	CDS	408968	409102	.	+	0	ID=cds398;Parent=gene481;Dbxref=Genbank:NP_687435.1,GeneID:1013196;Name=NP_687435.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687435.1;transl_table=11
NC_004116.1	RefSeq	gene	409138	410487	.	+	.	ID=gene482;Dbxref=GeneID:1013197;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SAG0402
NC_004116.1	RefSeq	CDS	409138	410487	.	+	0	ID=cds399;Parent=gene482;Dbxref=Genbank:NP_687436.1,GeneID:1013197;Name=NP_687436.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=NP_687436.1;transl_table=11
NC_004116.1	RefSeq	gene	410809	411336	.	+	.	ID=gene483;Dbxref=GeneID:1013198;Name=SAG0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0403
NC_004116.1	RefSeq	CDS	410809	411336	.	+	0	ID=cds400;Parent=gene483;Dbxref=Genbank:NP_687437.1,GeneID:1013198;Name=NP_687437.1;Note=identified by match to PFAM protein family HMM PF01812;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=NP_687437.1;transl_table=11
NC_004116.1	RefSeq	gene	411327	412004	.	+	.	ID=gene484;Dbxref=GeneID:1013199;Name=SAG0404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0404
NC_004116.1	RefSeq	CDS	411327	412004	.	+	0	ID=cds401;Parent=gene484;Dbxref=Genbank:NP_687438.1,GeneID:1013199;Name=NP_687438.1;Note=identified by match to PFAM protein family HMM PF01694;gbkey=CDS;product=rhomboid family protein;protein_id=NP_687438.1;transl_table=11
NC_004116.1	RefSeq	gene	412136	413179	.	+	.	ID=gene485;Dbxref=GeneID:1013200;Name=SAG0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0405
NC_004116.1	RefSeq	CDS	412136	413179	.	+	0	ID=cds402;Parent=gene485;Dbxref=Genbank:NP_687439.1,GeneID:1013200;Name=NP_687439.1;Note=identified by match to PFAM protein family HMM PF02608%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687439.1;transl_table=11
NC_004116.1	RefSeq	gene	413270	414169	.	-	.	ID=gene486;Dbxref=GeneID:1013201;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=SAG0406
NC_004116.1	RefSeq	CDS	413270	414169	.	-	0	ID=cds403;Parent=gene486;Dbxref=Genbank:NP_687440.1,GeneID:1013201;Name=NP_687440.1;Note=identified by match to PFAM protein family HMM PF00483;gbkey=CDS;gene=galU;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=NP_687440.1;transl_table=11
NC_004116.1	RefSeq	gene	414206	415222	.	-	.	ID=gene487;Dbxref=GeneID:1013202;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=SAG0407
NC_004116.1	RefSeq	CDS	414206	415222	.	-	0	ID=cds404;Parent=gene487;Dbxref=Genbank:NP_687441.1,GeneID:1013202;Name=NP_687441.1;Note=catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;gbkey=CDS;gene=gpsA;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=NP_687441.1;transl_table=11
NC_004116.1	RefSeq	gene	415392	415721	.	+	.	ID=gene488;Dbxref=GeneID:1013203;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SAG0408
NC_004116.1	RefSeq	CDS	415392	415721	.	+	0	ID=cds405;Parent=gene488;Dbxref=Genbank:NP_687442.1,GeneID:1013203;Name=NP_687442.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P;protein_id=NP_687442.1;transl_table=11
NC_004116.1	RefSeq	gene	415734	416549	.	+	.	ID=gene489;Dbxref=GeneID:1013204;Name=SAG0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0409
NC_004116.1	RefSeq	CDS	415734	416549	.	+	0	ID=cds406;Parent=gene489;Dbxref=Genbank:NP_687443.1,GeneID:1013204;Name=NP_687443.1;Note=identified by match to PFAM protein family HMM PF02096;gbkey=CDS;product=SpoIIIJ family protein;protein_id=NP_687443.1;transl_table=11
NC_004116.1	RefSeq	gene	416557	417378	.	+	.	ID=gene490;Dbxref=GeneID:1013205;Name=SAG0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0410
NC_004116.1	RefSeq	CDS	416557	417378	.	+	0	ID=cds407;Parent=gene490;Dbxref=Genbank:NP_687444.1,GeneID:1013205;Name=NP_687444.1;Note=identified by match to PFAM protein family HMM PF01424;gbkey=CDS;product=R3H domain-containing protein;protein_id=NP_687444.1;transl_table=11
NC_004116.1	RefSeq	gene	417719	419269	.	+	.	ID=gene491;Dbxref=GeneID:1013206;Name=Sa16SG;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa16SG
NC_004116.1	RefSeq	rRNA	417719	419269	.	+	.	ID=rna81;Parent=gene491;Dbxref=GeneID:1013206;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	exon	417719	419269	.	+	.	ID=id82;Parent=rna81;Dbxref=GeneID:1013206;gbkey=rRNA;product=16S ribosomal RNA
NC_004116.1	RefSeq	gene	419322	419394	.	+	.	ID=gene492;Dbxref=GeneID:1013207;Name=tRNA-Ala-6;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ala-6
NC_004116.1	RefSeq	tRNA	419322	419394	.	+	.	ID=rna82;Parent=gene492;Dbxref=GeneID:1013207;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	exon	419322	419394	.	+	.	ID=id83;Parent=rna82;Dbxref=GeneID:1013207;gbkey=tRNA;product=tRNA-Ala
NC_004116.1	RefSeq	gene	419549	422451	.	+	.	ID=gene493;Dbxref=GeneID:1013208;Name=Sa23SG;gbkey=Gene;gene_biotype=rRNA;locus_tag=Sa23SG
NC_004116.1	RefSeq	rRNA	419549	422451	.	+	.	ID=rna83;Parent=gene493;Dbxref=GeneID:1013208;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	exon	419549	422451	.	+	.	ID=id84;Parent=rna83;Dbxref=GeneID:1013208;gbkey=rRNA;product=23S ribosomal RNA
NC_004116.1	RefSeq	gene	422525	422641	.	+	.	ID=gene494;Dbxref=GeneID:5228957;Name=SAG_r05;gbkey=Gene;gene_biotype=rRNA;locus_tag=SAG_r05
NC_004116.1	RefSeq	rRNA	422525	422641	.	+	.	ID=rna84;Parent=gene494;Dbxref=GeneID:5228957;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	exon	422525	422641	.	+	.	ID=id85;Parent=rna84;Dbxref=GeneID:5228957;gbkey=rRNA;product=5S ribosomal RNA
NC_004116.1	RefSeq	gene	422645	422717	.	+	.	ID=gene495;Dbxref=GeneID:1013209;Name=tRNA-Val-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Val-4
NC_004116.1	RefSeq	tRNA	422645	422717	.	+	.	ID=rna85;Parent=gene495;Dbxref=GeneID:1013209;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	exon	422645	422717	.	+	.	ID=id86;Parent=rna85;Dbxref=GeneID:1013209;gbkey=tRNA;product=tRNA-Val
NC_004116.1	RefSeq	gene	422723	422793	.	+	.	ID=gene496;Dbxref=GeneID:1013210;Name=tRNA-Gly-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gly-5
NC_004116.1	RefSeq	tRNA	422723	422793	.	+	.	ID=rna86;Parent=gene496;Dbxref=GeneID:1013210;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	exon	422723	422793	.	+	.	ID=id87;Parent=rna86;Dbxref=GeneID:1013210;gbkey=tRNA;product=tRNA-Gly
NC_004116.1	RefSeq	gene	422830	422906	.	+	.	ID=gene497;Dbxref=GeneID:1013211;Name=tRNA-Ile-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Ile-3
NC_004116.1	RefSeq	tRNA	422830	422906	.	+	.	ID=rna87;Parent=gene497;Dbxref=GeneID:1013211;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	exon	422830	422906	.	+	.	ID=id88;Parent=rna87;Dbxref=GeneID:1013211;gbkey=tRNA;product=tRNA-Ile
NC_004116.1	RefSeq	gene	422914	422985	.	+	.	ID=gene498;Dbxref=GeneID:1013212;Name=tRNA-Glu-4;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Glu-4
NC_004116.1	RefSeq	tRNA	422914	422985	.	+	.	ID=rna88;Parent=gene498;Dbxref=GeneID:1013212;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	exon	422914	422985	.	+	.	ID=id89;Parent=rna88;Dbxref=GeneID:1013212;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	gene	423100	423633	.	-	.	ID=gene499;Dbxref=GeneID:1013213;Name=SAG0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0411
NC_004116.1	RefSeq	CDS	423100	423633	.	-	0	ID=cds408;Parent=gene499;Dbxref=Genbank:NP_687445.1,GeneID:1013213;Name=NP_687445.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687445.1;transl_table=11
NC_004116.1	RefSeq	gene	423717	424493	.	-	.	ID=gene500;Dbxref=GeneID:1013214;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=SAG0412
NC_004116.1	RefSeq	CDS	423717	424493	.	-	0	ID=cds409;Parent=gene500;Dbxref=Genbank:NP_687446.1,GeneID:1013214;Name=NP_687446.1;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;gbkey=CDS;gene=recX;product=RecX family transcriptional regulator;protein_id=NP_687446.1;transl_table=11
NC_004116.1	RefSeq	gene	424592	425947	.	+	.	ID=gene501;Dbxref=GeneID:1013215;Name=SAG0413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0413
NC_004116.1	RefSeq	CDS	424592	425947	.	+	0	ID=cds410;Parent=gene501;Dbxref=Genbank:NP_687447.1,GeneID:1013215;Name=NP_687447.1;Note=identified by match to PFAM protein family HMM PF01938;gbkey=CDS;product=RNA methyltransferase;protein_id=NP_687447.1;transl_table=11
NC_004116.1	RefSeq	gene	426216	426677	.	+	.	ID=gene502;Dbxref=GeneID:1013216;Name=SAG0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0414
NC_004116.1	RefSeq	CDS	426216	426677	.	+	0	ID=cds411;Parent=gene502;Dbxref=Genbank:NP_687448.1,GeneID:1013216;Name=NP_687448.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687448.1;transl_table=11
NC_004116.1	RefSeq	gene	426820	427248	.	+	.	ID=gene503;Dbxref=GeneID:1013217;Name=SAG0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0415
NC_004116.1	RefSeq	CDS	426820	427248	.	+	0	ID=cds412;Parent=gene503;Dbxref=Genbank:NP_687449.1,GeneID:1013217;Name=NP_687449.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687449.1;transl_table=11
NC_004116.1	RefSeq	gene	427436	431137	.	+	.	ID=gene504;Dbxref=GeneID:1013218;Name=SAG0416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0416
NC_004116.1	RefSeq	CDS	427436	431137	.	+	0	ID=cds413;Parent=gene504;Dbxref=Genbank:NP_687450.1,GeneID:1013218;Name=NP_687450.1;Note=identified by match to PFAM protein family HMM PF00082%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=protease;protein_id=NP_687450.1;transl_table=11
NC_004116.1	RefSeq	gene	431347	432255	.	+	.	ID=gene505;Dbxref=GeneID:1013219;Name=SAG0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0417
NC_004116.1	RefSeq	CDS	431347	432255	.	+	0	ID=cds414;Parent=gene505;Dbxref=Genbank:NP_687451.1,GeneID:1013219;Name=NP_687451.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_687451.1;transl_table=11
NC_004116.1	RefSeq	gene	432807	433817	.	+	.	ID=gene506;Dbxref=GeneID:1013220;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=SAG0418
NC_004116.1	RefSeq	CDS	432807	433817	.	+	0	ID=cds415;Parent=gene506;Dbxref=Genbank:NP_687452.1,GeneID:1013220;Name=NP_687452.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;gene=nrdF;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=NP_687452.1;transl_table=11
NC_004116.1	RefSeq	gene	433818	434231	.	+	.	ID=gene507;Dbxref=GeneID:1013221;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SAG0419
NC_004116.1	RefSeq	CDS	433818	434231	.	+	0	ID=cds416;Parent=gene507;Dbxref=Genbank:NP_687453.1,GeneID:1013221;Name=NP_687453.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=ribonucleotide reductase stimulatory protein;protein_id=NP_687453.1;transl_table=11
NC_004116.1	RefSeq	gene	434233	436398	.	+	.	ID=gene508;Dbxref=GeneID:1013222;Name=nrdE-1;gbkey=Gene;gene=nrdE-1;gene_biotype=protein_coding;locus_tag=SAG0420
NC_004116.1	RefSeq	CDS	434233	436398	.	+	0	ID=cds417;Parent=gene508;Dbxref=Genbank:NP_687454.1,GeneID:1013222;Name=NP_687454.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;gene=nrdE-1;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=NP_687454.1;transl_table=11
NC_004116.1	RefSeq	gene	436461	439628	.	+	.	ID=gene509;Dbxref=GeneID:1013223;Name=SAG0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0421
NC_004116.1	RefSeq	CDS	436461	439628	.	+	0	ID=cds418;Parent=gene509;Dbxref=Genbank:NP_687455.1,GeneID:1013223;Name=NP_687455.1;Note=similar to OMNI:NTL01SPL0643%3B identified by sequence similarity%3B There are documented cases with S in place of G in the LPXTG motif. The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687455.1;transl_table=11
NC_004116.1	RefSeq	gene	439641	440030	.	+	.	ID=gene510;Dbxref=GeneID:1013224;Name=SAG0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0422
NC_004116.1	RefSeq	CDS	439641	440030	.	+	0	ID=cds419;Parent=gene510;Dbxref=Genbank:NP_687456.1,GeneID:1013224;Name=NP_687456.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687456.1;transl_table=11
NC_004116.1	RefSeq	gene	440074	440472	.	-	.	ID=gene511;Dbxref=GeneID:1013225;Name=SAG0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0423
NC_004116.1	RefSeq	CDS	440074	440472	.	-	0	ID=cds420;Parent=gene511;Dbxref=Genbank:NP_687457.1,GeneID:1013225;Name=NP_687457.1;Note=similar to OMNI:NTL01CA0427%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687457.1;transl_table=11
NC_004116.1	RefSeq	gene	440744	441028	.	-	.	ID=gene512;Dbxref=GeneID:1013226;Name=SAG0424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0424
NC_004116.1	RefSeq	CDS	440744	441028	.	-	0	ID=cds421;Parent=gene512;Dbxref=Genbank:NP_687458.1,GeneID:1013226;Name=NP_687458.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687458.1;transl_table=11
NC_004116.1	RefSeq	gene	441115	441432	.	-	.	ID=gene513;Dbxref=GeneID:1013227;Name=SAG0425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0425
NC_004116.1	RefSeq	CDS	441115	441432	.	-	0	ID=cds422;Parent=gene513;Dbxref=Genbank:NP_687459.1,GeneID:1013227;Name=NP_687459.1;Note=identified by match to PFAM protein family HMM PF02627;gbkey=CDS;product=carboxymuconolactone decarboxylase family protein;protein_id=NP_687459.1;transl_table=11
NC_004116.1	RefSeq	gene	441456	441851	.	-	.	ID=gene514;Dbxref=GeneID:1013228;Name=SAG0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0426
NC_004116.1	RefSeq	CDS	441456	441851	.	-	0	ID=cds423;Parent=gene514;Dbxref=Genbank:NP_687460.1,GeneID:1013228;Name=NP_687460.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687460.1;transl_table=11
NC_004116.1	RefSeq	gene	441861	442250	.	-	.	ID=gene515;Dbxref=GeneID:1013229;Name=SAG0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0427
NC_004116.1	RefSeq	CDS	441861	442250	.	-	0	ID=cds424;Parent=gene515;Dbxref=Genbank:NP_687461.1,GeneID:1013229;Name=NP_687461.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=NP_687461.1;transl_table=11
NC_004116.1	RefSeq	gene	442266	443303	.	-	.	ID=gene516;Dbxref=GeneID:1013230;Name=SAG0428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0428
NC_004116.1	RefSeq	CDS	442266	443303	.	-	0	ID=cds425;Parent=gene516;Dbxref=Genbank:NP_687462.1,GeneID:1013230;Name=NP_687462.1;Note=identified by match to PFAM protein family HMM PF00107;gbkey=CDS;product=zinc-containing alcohol dehydrogenase;protein_id=NP_687462.1;transl_table=11
NC_004116.1	RefSeq	gene	443413	444267	.	-	.	ID=gene517;Dbxref=GeneID:1013231;Name=SAG0429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0429
NC_004116.1	RefSeq	CDS	443413	444267	.	-	0	ID=cds426;Parent=gene517;Dbxref=Genbank:NP_687463.1,GeneID:1013231;Name=NP_687463.1;Note=identified by match to PFAM protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=NP_687463.1;transl_table=11
NC_004116.1	RefSeq	gene	444352	445215	.	-	.	ID=gene518;Dbxref=GeneID:1013232;Name=SAG0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0430
NC_004116.1	RefSeq	CDS	444352	445215	.	-	0	ID=cds427;Parent=gene518;Dbxref=Genbank:NP_687464.1,GeneID:1013232;Name=NP_687464.1;Note=identified by match to PFAM protein family HMM PF01545;gbkey=CDS;product=cation efflux system protein;protein_id=NP_687464.1;transl_table=11
NC_004116.1	RefSeq	gene	445347	445871	.	+	.	ID=gene519;Dbxref=GeneID:1013233;Name=SAG0431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0431
NC_004116.1	RefSeq	CDS	445347	445871	.	+	0	ID=cds428;Parent=gene519;Dbxref=Genbank:NP_687465.1,GeneID:1013233;Name=NP_687465.1;Note=identified by match to PFAM protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=NP_687465.1;transl_table=11
NC_004116.1	RefSeq	gene	446066	447259	.	-	.	ID=gene520;Dbxref=GeneID:1013234;Name=SAG0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0432
NC_004116.1	RefSeq	CDS	446066	447259	.	-	0	ID=cds429;Parent=gene520;Dbxref=Genbank:NP_687466.1,GeneID:1013234;Name=NP_687466.1;Note=identified by match to PFAM protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=NP_687466.1;transl_table=11
NC_004116.1	RefSeq	gene	447507	451676	.	+	.	ID=gene521;Dbxref=GeneID:1013235;Name=SAG0433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0433
NC_004116.1	RefSeq	CDS	447507	451676	.	+	0	ID=cds430;Parent=gene521;Dbxref=Genbank:NP_687467.1,GeneID:1013235;Name=NP_687467.1;Note=identified by match to PFAM protein family HMM PF00746;gbkey=CDS;product=surface protein Rib;protein_id=NP_687467.1;transl_table=11
NC_004116.1	RefSeq	gene	452182	452367	.	-	.	ID=gene522;Dbxref=GeneID:1013236;Name=SAG0434;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GB:X71808 PID:405804%3B identified by sequence similarity%3B transposase%2C IS256 family%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0434
NC_004116.1	RefSeq	gene	452388	452681	.	+	.	ID=gene523;Dbxref=GeneID:1013237;Name=SAG0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0435
NC_004116.1	RefSeq	CDS	452388	452681	.	+	0	ID=cds431;Parent=gene523;Dbxref=Genbank:NP_687468.1,GeneID:1013237;Name=NP_687468.1;Note=similar to PID:984582 GB:U00096 SP:Q47150 PID:1786420%3B identified by sequence similarity;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=NP_687468.1;transl_table=11
NC_004116.1	RefSeq	gene	452678	452866	.	+	.	ID=gene524;Dbxref=GeneID:1013238;Name=SAG0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0436
NC_004116.1	RefSeq	CDS	452678	452866	.	+	0	ID=cds432;Parent=gene524;Dbxref=Genbank:NP_687469.1,GeneID:1013238;Name=NP_687469.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687469.1;transl_table=11
NC_004116.1	RefSeq	gene	453019	453390	.	+	.	ID=gene525;Dbxref=GeneID:1013239;Name=SAG0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0437
NC_004116.1	RefSeq	CDS	453019	453390	.	+	0	ID=cds433;Parent=gene525;Dbxref=Genbank:NP_687470.1,GeneID:1013239;Name=NP_687470.1;gbkey=CDS;product=lipoprotein;protein_id=NP_687470.1;transl_table=11
NC_004116.1	RefSeq	gene	453904	454341	.	+	.	ID=gene526;Dbxref=GeneID:1013240;Name=SAG0438;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00589%3B site-specific recombinase%2C phage integrase family%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0438
NC_004116.1	RefSeq	gene	454477	454547	.	-	.	ID=gene527;Dbxref=GeneID:1013241;Name=tRNA-Thr-3;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Thr-3
NC_004116.1	RefSeq	tRNA	454477	454547	.	-	.	ID=rna89;Parent=gene527;Dbxref=GeneID:1013241;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	exon	454477	454547	.	-	.	ID=id90;Parent=rna89;Dbxref=GeneID:1013241;gbkey=tRNA;product=tRNA-Thr
NC_004116.1	RefSeq	gene	454900	455461	.	-	.	ID=gene528;Dbxref=GeneID:1013242;Name=SAG0439;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0439
NC_004116.1	RefSeq	gene	455763	456017	.	+	.	ID=gene529;Dbxref=GeneID:1013243;Name=SAG0440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0440
NC_004116.1	RefSeq	CDS	455763	456017	.	+	0	ID=cds434;Parent=gene529;Dbxref=Genbank:NP_687471.1,GeneID:1013243;Name=NP_687471.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687471.1;transl_table=11
NC_004116.1	RefSeq	gene	456126	456437	.	+	.	ID=gene530;Dbxref=GeneID:1013244;Name=SAG0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0441
NC_004116.1	RefSeq	CDS	456126	456437	.	+	0	ID=cds435;Parent=gene530;Dbxref=Genbank:NP_687472.1,GeneID:1013244;Name=NP_687472.1;Note=similar to GP:13622655%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687472.1;transl_table=11
NC_004116.1	RefSeq	gene	456705	457274	.	+	.	ID=gene531;Dbxref=GeneID:1013245;Name=SAG0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0442
NC_004116.1	RefSeq	CDS	456705	457274	.	+	0	ID=cds436;Parent=gene531;Dbxref=Genbank:NP_687473.1,GeneID:1013245;Name=NP_687473.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687473.1;transl_table=11
NC_004116.1	RefSeq	gene	457372	457956	.	+	.	ID=gene532;Dbxref=GeneID:1013246;Name=SAG0443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0443
NC_004116.1	RefSeq	CDS	457372	457956	.	+	0	ID=cds437;Parent=gene532;Dbxref=Genbank:NP_687474.1,GeneID:1013246;Name=NP_687474.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687474.1;transl_table=11
NC_004116.1	RefSeq	gene	457953	458519	.	+	.	ID=gene533;Dbxref=GeneID:1013247;Name=SAG0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0444
NC_004116.1	RefSeq	CDS	457953	458519	.	+	0	ID=cds438;Parent=gene533;Dbxref=Genbank:NP_687475.1,GeneID:1013247;Name=NP_687475.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687475.1;transl_table=11
NC_004116.1	RefSeq	gene	458519	461170	.	+	.	ID=gene534;Dbxref=GeneID:1013248;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=SAG0445
NC_004116.1	RefSeq	CDS	458519	461170	.	+	0	ID=cds439;Parent=gene534;Dbxref=Genbank:NP_687476.1,GeneID:1013248;Name=NP_687476.1;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=NP_687476.1;transl_table=11
NC_004116.1	RefSeq	gene	461341	462300	.	+	.	ID=gene535;Dbxref=GeneID:1013249;Name=SAG0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0446
NC_004116.1	RefSeq	CDS	461341	462300	.	+	0	ID=cds440;Parent=gene535;Dbxref=Genbank:NP_687477.1,GeneID:1013249;Name=NP_687477.1;Note=identified by match to PFAM protein family HMM PF01408;gbkey=CDS;product=Gfo/Idh/MocA family oxidoreductase;protein_id=NP_687477.1;transl_table=11
NC_004116.1	RefSeq	gene	462461	463324	.	+	.	ID=gene536;Dbxref=GeneID:1013250;Name=SAG0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0447
NC_004116.1	RefSeq	CDS	462461	463324	.	+	0	ID=cds441;Parent=gene536;Dbxref=Genbank:NP_687478.1,GeneID:1013250;Name=NP_687478.1;Note=identified by match to PFAM protein family HMM PF01544;gbkey=CDS;product=magnesium transporter CorA family protein;protein_id=NP_687478.1;transl_table=11
NC_004116.1	RefSeq	gene	463371	464546	.	-	.	ID=gene537;Dbxref=GeneID:1013251;Name=SAG0448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0448
NC_004116.1	RefSeq	CDS	463371	464546	.	-	0	ID=cds442;Parent=gene537;Dbxref=Genbank:NP_687479.1,GeneID:1013251;Name=NP_687479.1;Note=identified by match to PFAM protein family HMM PF00872;gbkey=CDS;product=IS256 family transposase;protein_id=NP_687479.1;transl_table=11
NC_004116.1	RefSeq	gene	464852	465916	.	+	.	ID=gene538;Dbxref=GeneID:1013252;Name=SAG0449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0449
NC_004116.1	RefSeq	CDS	464852	465916	.	+	0	ID=cds443;Parent=gene538;Dbxref=Genbank:NP_687480.1,GeneID:1013252;Name=NP_687480.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687480.1;transl_table=11
NC_004116.1	RefSeq	gene	466030	467022	.	+	.	ID=gene539;Dbxref=GeneID:1013253;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=SAG0450
NC_004116.1	RefSeq	CDS	466030	467022	.	+	0	ID=cds444;Parent=gene539;Dbxref=Genbank:NP_687481.1,GeneID:1013253;Name=NP_687481.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;gene=asnA;product=asparagine synthetase AsnA;protein_id=NP_687481.1;transl_table=11
NC_004116.1	RefSeq	gene	467067	467516	.	-	.	ID=gene540;Dbxref=GeneID:1013254;Name=SAG0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0451
NC_004116.1	RefSeq	CDS	467067	467516	.	-	0	ID=cds445;Parent=gene540;Dbxref=Genbank:NP_687482.1,GeneID:1013254;Name=NP_687482.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687482.1;transl_table=11
NC_004116.1	RefSeq	gene	467646	468185	.	+	.	ID=gene541;Dbxref=GeneID:1013255;Name=SAG0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0452
NC_004116.1	RefSeq	CDS	467646	468185	.	+	0	ID=cds446;Parent=gene541;Dbxref=Genbank:NP_687483.1,GeneID:1013255;Name=NP_687483.1;Note=identified by match to TIGR protein family HMM TIGR00095;gbkey=CDS;product=type II DNA modification methyltransferase;protein_id=NP_687483.1;transl_table=11
NC_004116.1	RefSeq	gene	468197	468487	.	+	.	ID=gene542;Dbxref=GeneID:1013256;Name=SAG0453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0453
NC_004116.1	RefSeq	CDS	468197	468487	.	+	0	ID=cds447;Parent=gene542;Dbxref=Genbank:NP_687484.1,GeneID:1013256;Name=NP_687484.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687484.1;transl_table=11
NC_004116.1	RefSeq	gene	468484	468969	.	+	.	ID=gene543;Dbxref=GeneID:1013257;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SAG0454
NC_004116.1	RefSeq	CDS	468484	468969	.	+	0	ID=cds448;Parent=gene543;Dbxref=Genbank:NP_687485.1,GeneID:1013257;Name=NP_687485.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=NP_687485.1;transl_table=11
NC_004116.1	RefSeq	gene	468959	470032	.	+	.	ID=gene544;Dbxref=GeneID:1013258;Name=SAG0455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0455
NC_004116.1	RefSeq	CDS	468959	470032	.	+	0	ID=cds449;Parent=gene544;Dbxref=Genbank:NP_687486.1,GeneID:1013258;Name=NP_687486.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687486.1;transl_table=11
NC_004116.1	RefSeq	gene	470107	471422	.	+	.	ID=gene545;Dbxref=GeneID:1013259;Name=SAG0456;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0456
NC_004116.1	RefSeq	gene	471508	472086	.	+	.	ID=gene546;Dbxref=GeneID:1013260;Name=SAG0457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0457
NC_004116.1	RefSeq	CDS	471508	472086	.	+	0	ID=cds450;Parent=gene546;Dbxref=Genbank:NP_687487.1,GeneID:1013260;Name=NP_687487.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687487.1;transl_table=11
NC_004116.1	RefSeq	gene	472137	473243	.	+	.	ID=gene547;Dbxref=GeneID:1013261;Name=SAG0458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0458
NC_004116.1	RefSeq	CDS	472137	473243	.	+	0	ID=cds451;Parent=gene547;Dbxref=Genbank:NP_687488.1,GeneID:1013261;Name=NP_687488.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase N;protein_id=NP_687488.1;transl_table=11
NC_004116.1	RefSeq	gene	473243	473758	.	+	.	ID=gene548;Dbxref=GeneID:1013262;Name=SAG0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0459
NC_004116.1	RefSeq	CDS	473243	473758	.	+	0	ID=cds452;Parent=gene548;Dbxref=Genbank:NP_687489.1,GeneID:1013262;Name=NP_687489.1;Note=similar to OMNI:SP0769%3B identified by sequence similarity;gbkey=CDS;product=VanZF domain-containing protein;protein_id=NP_687489.1;transl_table=11
NC_004116.1	RefSeq	gene	473937	475682	.	+	.	ID=gene549;Dbxref=GeneID:1013263;Name=SAG0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0460
NC_004116.1	RefSeq	CDS	473937	475682	.	+	0	ID=cds453;Parent=gene549;Dbxref=Genbank:NP_687490.1,GeneID:1013263;Name=NP_687490.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=NP_687490.1;transl_table=11
NC_004116.1	RefSeq	gene	475672	477411	.	+	.	ID=gene550;Dbxref=GeneID:1013264;Name=SAG0461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0461
NC_004116.1	RefSeq	CDS	475672	477411	.	+	0	ID=cds454;Parent=gene550;Dbxref=Genbank:NP_687491.1,GeneID:1013264;Name=NP_687491.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=NP_687491.1;transl_table=11
NC_004116.1	RefSeq	gene	477539	478105	.	+	.	ID=gene551;Dbxref=GeneID:1013265;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=SAG0462
NC_004116.1	RefSeq	CDS	477539	478105	.	+	0	ID=cds455;Parent=gene551;Dbxref=Genbank:NP_687492.1,GeneID:1013265;Name=NP_687492.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;gene=trpG;product=anthranilate synthase component II;protein_id=NP_687492.1;transl_table=11
NC_004116.1	RefSeq	gene	478172	478711	.	-	.	ID=gene552;Dbxref=GeneID:1013266;Name=SAG0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0463
NC_004116.1	RefSeq	CDS	478172	478711	.	-	0	ID=cds456;Parent=gene552;Dbxref=Genbank:NP_687493.1,GeneID:1013266;Name=NP_687493.1;Note=identified by match to PFAM protein family HMM PF02632;gbkey=CDS;product=BioY family protein;protein_id=NP_687493.1;transl_table=11
NC_004116.1	RefSeq	gene	478712	479704	.	-	.	ID=gene553;Dbxref=GeneID:1013267;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=SAG0464
NC_004116.1	RefSeq	CDS	478712	479704	.	-	0	ID=cds457;Parent=gene553;Dbxref=Genbank:NP_687494.1,GeneID:1013267;Name=NP_687494.1;Note=identified by match to PFAM protein family HMM PF01792;gbkey=CDS;gene=bioB;product=biotin synthetase;protein_id=NP_687494.1;transl_table=11
NC_004116.1	RefSeq	gene	479828	480322	.	+	.	ID=gene554;Dbxref=GeneID:1013268;Name=SAG0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0465
NC_004116.1	RefSeq	CDS	479828	480322	.	+	0	ID=cds458;Parent=gene554;Dbxref=Genbank:NP_687495.1,GeneID:1013268;Name=NP_687495.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687495.1;transl_table=11
NC_004116.1	RefSeq	gene	480332	481447	.	+	.	ID=gene555;Dbxref=GeneID:1013269;Name=SAG0466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0466
NC_004116.1	RefSeq	CDS	480332	481447	.	+	0	ID=cds459;Parent=gene555;Dbxref=Genbank:NP_687496.1,GeneID:1013269;Name=NP_687496.1;Note=identified by match to PFAM protein family HMM PF00108;gbkey=CDS;product=thiolase;protein_id=NP_687496.1;transl_table=11
NC_004116.1	RefSeq	gene	481440	482669	.	+	.	ID=gene556;Dbxref=GeneID:1013270;Name=SAG0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0467
NC_004116.1	RefSeq	CDS	481440	482669	.	+	0	ID=cds460;Parent=gene556;Dbxref=Genbank:NP_687497.1,GeneID:1013270;Name=NP_687497.1;gbkey=CDS;product=AMP-binding protein;protein_id=NP_687497.1;transl_table=11
NC_004116.1	RefSeq	gene	482782	483414	.	+	.	ID=gene557;Dbxref=GeneID:1013271;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=SAG0468
NC_004116.1	RefSeq	CDS	482782	483414	.	+	0	ID=cds461;Parent=gene557;Dbxref=Genbank:NP_687498.1,GeneID:1013271;Name=NP_687498.1;Note=identified by match to PFAM protein family HMM PF00730;gbkey=CDS;gene=nth;product=endonuclease III;protein_id=NP_687498.1;transl_table=11
NC_004116.1	RefSeq	gene	483415	483810	.	-	.	ID=gene558;Dbxref=GeneID:1013272;Name=SAG0469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0469
NC_004116.1	RefSeq	CDS	483415	483810	.	-	0	ID=cds462;Parent=gene558;Dbxref=Genbank:NP_687499.1,GeneID:1013272;Name=NP_687499.1;Note=similar to OMNI:SP1808%3B identified by sequence similarity;gbkey=CDS;product=type IV prepilin peptidase-like protein;protein_id=NP_687499.1;transl_table=11
NC_004116.1	RefSeq	gene	483965	484174	.	+	.	ID=gene559;Dbxref=GeneID:1013273;Name=SAG0470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0470
NC_004116.1	RefSeq	CDS	483965	484174	.	+	0	ID=cds463;Parent=gene559;Dbxref=Genbank:NP_687500.1,GeneID:1013273;Name=NP_687500.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687500.1;transl_table=11
NC_004116.1	RefSeq	gene	484171	485139	.	+	.	ID=gene560;Dbxref=GeneID:1013274;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=SAG0471
NC_004116.1	RefSeq	CDS	484171	485139	.	+	0	ID=cds464;Parent=gene560;Dbxref=Genbank:NP_687501.1,GeneID:1013274;Name=NP_687501.1;Note=identified by match to PFAM protein family HMM PF00480;gbkey=CDS;gene=glk;product=glucokinase;protein_id=NP_687501.1;transl_table=11
NC_004116.1	RefSeq	gene	485151	485531	.	+	.	ID=gene561;Dbxref=GeneID:1013275;Name=SAG0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0472
NC_004116.1	RefSeq	CDS	485151	485531	.	+	0	ID=cds465;Parent=gene561;Dbxref=Genbank:NP_687502.1,GeneID:1013275;Name=NP_687502.1;Note=identified by match to PFAM protein family HMM PF00581%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=rhodanese-like domain-containing protein;protein_id=NP_687502.1;transl_table=11
NC_004116.1	RefSeq	gene	485763	487604	.	+	.	ID=gene562;Dbxref=GeneID:1013276;Name=SAG0473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0473
NC_004116.1	RefSeq	CDS	485763	487604	.	+	0	ID=cds466;Parent=gene562;Dbxref=Genbank:NP_687503.1,GeneID:1013276;Name=NP_687503.1;Note=identified by match to PFAM protein family HMM PF00009;gbkey=CDS;product=elongation factor Tu family protein;protein_id=NP_687503.1;transl_table=11
NC_004116.1	RefSeq	gene	487649	487894	.	+	.	ID=gene563;Dbxref=GeneID:1013277;Name=SAG0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0474
NC_004116.1	RefSeq	CDS	487649	487894	.	+	0	ID=cds467;Parent=gene563;Dbxref=Genbank:NP_687504.1,GeneID:1013277;Name=NP_687504.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687504.1;transl_table=11
NC_004116.1	RefSeq	gene	488024	489379	.	+	.	ID=gene564;Dbxref=GeneID:1013278;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SAG0475
NC_004116.1	RefSeq	CDS	488024	489379	.	+	0	ID=cds468;Parent=gene564;Dbxref=Genbank:NP_687505.1,GeneID:1013278;Name=NP_687505.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=NP_687505.1;transl_table=11
NC_004116.1	RefSeq	gene	489382	490458	.	+	.	ID=gene565;Dbxref=GeneID:1013279;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SAG0476
NC_004116.1	RefSeq	CDS	489382	490458	.	+	0	ID=cds469;Parent=gene565;Dbxref=Genbank:NP_687506.1,GeneID:1013279;Name=NP_687506.1;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=NP_687506.1;transl_table=11
NC_004116.1	RefSeq	gene	490462	491598	.	+	.	ID=gene566;Dbxref=GeneID:1013280;Name=SAG0477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0477
NC_004116.1	RefSeq	CDS	490462	491598	.	+	0	ID=cds470;Parent=gene566;Dbxref=Genbank:NP_687507.1,GeneID:1013280;Name=NP_687507.1;Note=similar to OMNI:SP0690%3B identified by sequence similarity;gbkey=CDS;product=cell division protein DivIB;protein_id=NP_687507.1;transl_table=11
NC_004116.1	RefSeq	gene	491954	493243	.	+	.	ID=gene567;Dbxref=GeneID:1013281;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SAG0478
NC_004116.1	RefSeq	CDS	491954	493243	.	+	0	ID=cds471;Parent=gene567;Dbxref=Genbank:NP_687508.1,GeneID:1013281;Name=NP_687508.1;Note=identified by match to PFAM protein family HMM PF02491;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=NP_687508.1;transl_table=11
NC_004116.1	RefSeq	gene	493265	494545	.	+	.	ID=gene568;Dbxref=GeneID:1013282;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=SAG0479
NC_004116.1	RefSeq	CDS	493265	494545	.	+	0	ID=cds472;Parent=gene568;Dbxref=Genbank:NP_687509.1,GeneID:1013282;Name=NP_687509.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=NP_687509.1;transl_table=11
NC_004116.1	RefSeq	gene	494551	495225	.	+	.	ID=gene569;Dbxref=GeneID:1013283;Name=SAG0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0480
NC_004116.1	RefSeq	CDS	494551	495225	.	+	0	ID=cds473;Parent=gene569;Dbxref=Genbank:NP_687510.1,GeneID:1013283;Name=NP_687510.1;Note=identified by match to PFAM protein family HMM PF01168;gbkey=CDS;product=hypothetical protein;protein_id=NP_687510.1;transl_table=11
NC_004116.1	RefSeq	gene	495237	495842	.	+	.	ID=gene570;Dbxref=GeneID:1013284;Name=ylmF;gbkey=Gene;gene=ylmF;gene_biotype=protein_coding;locus_tag=SAG0481
NC_004116.1	RefSeq	CDS	495237	495842	.	+	0	ID=cds474;Parent=gene570;Dbxref=Genbank:NP_687511.1,GeneID:1013284;Name=NP_687511.1;Note=similar to GP:4009494%3B identified by sequence similarity;gbkey=CDS;gene=ylmF;product=hypothetical protein;protein_id=NP_687511.1;transl_table=11
NC_004116.1	RefSeq	gene	495845	496099	.	+	.	ID=gene571;Dbxref=GeneID:1013285;Name=SAG0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0482
NC_004116.1	RefSeq	CDS	495845	496099	.	+	0	ID=cds475;Parent=gene571;Dbxref=Genbank:NP_687512.1,GeneID:1013285;Name=NP_687512.1;Note=identified by match to PFAM protein family HMM PF02325;gbkey=CDS;product=hypothetical protein;protein_id=NP_687512.1;transl_table=11
NC_004116.1	RefSeq	gene	496101	496889	.	+	.	ID=gene572;Dbxref=GeneID:1013286;Name=ylmH;gbkey=Gene;gene=ylmH;gene_biotype=protein_coding;locus_tag=SAG0483
NC_004116.1	RefSeq	CDS	496101	496889	.	+	0	ID=cds476;Parent=gene572;Dbxref=Genbank:NP_687513.1,GeneID:1013286;Name=NP_687513.1;Note=identified by match to PFAM protein family HMM PF01479;gbkey=CDS;gene=ylmH;product=hypothetical protein;protein_id=NP_687513.1;transl_table=11
NC_004116.1	RefSeq	gene	496899	497669	.	+	.	ID=gene573;Dbxref=GeneID:1013287;Name=SAG0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0484
NC_004116.1	RefSeq	CDS	496899	497669	.	+	0	ID=cds477;Parent=gene573;Dbxref=Genbank:NP_687514.1,GeneID:1013287;Name=NP_687514.1;Note=similar to OMNI:SP1661%3B identified by sequence similarity;gbkey=CDS;product=cell division protein DivIVA;protein_id=NP_687514.1;transl_table=11
NC_004116.1	RefSeq	gene	497954	500746	.	+	.	ID=gene574;Dbxref=GeneID:1013288;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SAG0485
NC_004116.1	RefSeq	CDS	497954	500746	.	+	0	ID=cds478;Parent=gene574;Dbxref=Genbank:NP_687515.1,GeneID:1013288;Name=NP_687515.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=NP_687515.1;transl_table=11
NC_004116.1	RefSeq	gene	500863	501165	.	-	.	ID=gene575;Dbxref=GeneID:1013289;Name=SAG0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0486
NC_004116.1	RefSeq	CDS	500863	501165	.	-	0	ID=cds479;Parent=gene575;Dbxref=Genbank:NP_687516.1,GeneID:1013289;Name=NP_687516.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687516.1;transl_table=11
NC_004116.1	RefSeq	gene	501229	501684	.	-	.	ID=gene576;Dbxref=GeneID:1013290;Name=SAG0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0487
NC_004116.1	RefSeq	CDS	501229	501684	.	-	0	ID=cds480;Parent=gene576;Dbxref=Genbank:NP_687517.1,GeneID:1013290;Name=NP_687517.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=NP_687517.1;transl_table=11
NC_004116.1	RefSeq	gene	501870	504131	.	-	.	ID=gene577;Dbxref=GeneID:1013291;Name=SAG0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0488
NC_004116.1	RefSeq	CDS	501870	504131	.	-	0	ID=cds481;Parent=gene577;Dbxref=Genbank:NP_687518.1,GeneID:1013291;Name=NP_687518.1;Note=identified by match to PFAM protein family HMM PF00004;gbkey=CDS;product=ATP-dependent Clp protease%2C ATP-binding subunit;protein_id=NP_687518.1;transl_table=11
NC_004116.1	RefSeq	gene	504287	504391	.	+	.	ID=gene578;Dbxref=GeneID:1013292;Name=SAG0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0489
NC_004116.1	RefSeq	CDS	504287	504391	.	+	0	ID=cds482;Parent=gene578;Dbxref=Genbank:NP_687519.1,GeneID:1013292;Name=NP_687519.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687519.1;transl_table=11
NC_004116.1	RefSeq	gene	504429	504659	.	+	.	ID=gene579;Dbxref=GeneID:1013293;Name=SAG0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0490
NC_004116.1	RefSeq	CDS	504429	504659	.	+	0	ID=cds483;Parent=gene579;Dbxref=Genbank:NP_687520.1,GeneID:1013293;Name=NP_687520.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687520.1;transl_table=11
NC_004116.1	RefSeq	gene	504801	505493	.	+	.	ID=gene580;Dbxref=GeneID:1013294;Name=SAG0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0491
NC_004116.1	RefSeq	CDS	504801	505493	.	+	0	ID=cds484;Parent=gene580;Dbxref=Genbank:NP_687521.1,GeneID:1013294;Name=NP_687521.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687521.1;transl_table=11
NC_004116.1	RefSeq	gene	505486	506220	.	+	.	ID=gene581;Dbxref=GeneID:1013295;Name=SAG0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0492
NC_004116.1	RefSeq	CDS	505486	506220	.	+	0	ID=cds485;Parent=gene581;Dbxref=Genbank:NP_687522.1,GeneID:1013295;Name=NP_687522.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_687522.1;transl_table=11
NC_004116.1	RefSeq	gene	506507	508201	.	+	.	ID=gene582;Dbxref=GeneID:1013296;Name=SAG0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0493
NC_004116.1	RefSeq	CDS	506507	508201	.	+	0	ID=cds486;Parent=gene582;Dbxref=Genbank:NP_687523.1,GeneID:1013296;Name=NP_687523.1;Note=identified by match to PFAM protein family HMM PF00408;gbkey=CDS;product=phosphoglucomutase/phosphomannomutase family protein;protein_id=NP_687523.1;transl_table=11
NC_004116.1	RefSeq	gene	508340	509194	.	+	.	ID=gene583;Dbxref=GeneID:1013297;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=SAG0494
NC_004116.1	RefSeq	CDS	508340	509194	.	+	0	ID=cds487;Parent=gene583;Dbxref=Genbank:NP_687524.1,GeneID:1013297;Name=NP_687524.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;gene=folD;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=NP_687524.1;transl_table=11
NC_004116.1	RefSeq	gene	509191	510027	.	+	.	ID=gene584;Dbxref=GeneID:1013298;Name=SAG0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0495
NC_004116.1	RefSeq	CDS	509191	510027	.	+	0	ID=cds488;Parent=gene584;Dbxref=Genbank:NP_687525.1,GeneID:1013298;Name=NP_687525.1;Note=identified by match to PFAM protein family HMM PF01256%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687525.1;transl_table=11
NC_004116.1	RefSeq	gene	510153	511493	.	+	.	ID=gene585;Dbxref=GeneID:1013299;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SAG0496
NC_004116.1	RefSeq	CDS	510153	511493	.	+	0	ID=cds489;Parent=gene585;Dbxref=Genbank:NP_687526.1,GeneID:1013299;Name=NP_687526.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=NP_687526.1;transl_table=11
NC_004116.1	RefSeq	gene	511471	511686	.	+	.	ID=gene586;Dbxref=GeneID:1013300;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=SAG0497
NC_004116.1	RefSeq	CDS	511471	511686	.	+	0	ID=cds490;Parent=gene586;Dbxref=Genbank:NP_687527.1,GeneID:1013300;Name=NP_687527.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;gene=xseB;product=exodeoxyribonuclease VII small subunit;protein_id=NP_687527.1;transl_table=11
NC_004116.1	RefSeq	gene	511686	512558	.	+	.	ID=gene587;Dbxref=GeneID:1013301;Name=SAG0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0498
NC_004116.1	RefSeq	CDS	511686	512558	.	+	0	ID=cds491;Parent=gene587;Dbxref=Genbank:NP_687528.1,GeneID:1013301;Name=NP_687528.1;Note=identified by match to PFAM protein family HMM PF00348;gbkey=CDS;product=geranyltranstransferase;protein_id=NP_687528.1;transl_table=11
NC_004116.1	RefSeq	gene	512551	513378	.	+	.	ID=gene588;Dbxref=GeneID:1013302;Name=SAG0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0499
NC_004116.1	RefSeq	CDS	512551	513378	.	+	0	ID=cds492;Parent=gene588;Dbxref=Genbank:NP_687529.1,GeneID:1013302;Name=NP_687529.1;Note=identified by match to PFAM protein family HMM PF01479;gbkey=CDS;product=hemolysin A;protein_id=NP_687529.1;transl_table=11
NC_004116.1	RefSeq	gene	513365	513838	.	+	.	ID=gene589;Dbxref=GeneID:1013303;Name=SAG0500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0500
NC_004116.1	RefSeq	CDS	513365	513838	.	+	0	ID=cds493;Parent=gene589;Dbxref=Genbank:NP_687530.1,GeneID:1013303;Name=NP_687530.1;Note=identified by match to PFAM protein family HMM PF01316;gbkey=CDS;product=arginine repressor ArgR;protein_id=NP_687530.1;transl_table=11
NC_004116.1	RefSeq	gene	513850	515508	.	+	.	ID=gene590;Dbxref=GeneID:1013304;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=SAG0501
NC_004116.1	RefSeq	CDS	513850	515508	.	+	0	ID=cds494;Parent=gene590;Dbxref=Genbank:NP_687531.1,GeneID:1013304;Name=NP_687531.1;Note=identified by match to PFAM protein family HMM PF02463;gbkey=CDS;gene=recN;product=DNA repair protein RecN;protein_id=NP_687531.1;transl_table=11
NC_004116.1	RefSeq	gene	515621	516457	.	+	.	ID=gene591;Dbxref=GeneID:1013305;Name=SAG0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0502
NC_004116.1	RefSeq	CDS	515621	516457	.	+	0	ID=cds495;Parent=gene591;Dbxref=Genbank:NP_687532.1,GeneID:1013305;Name=NP_687532.1;Note=identified by match to PFAM protein family HMM PF02645%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=DegV family protein;protein_id=NP_687532.1;transl_table=11
NC_004116.1	RefSeq	gene	516450	517289	.	+	.	ID=gene592;Dbxref=GeneID:1013306;Name=SAG0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0503
NC_004116.1	RefSeq	CDS	516450	517289	.	+	0	ID=cds496;Parent=gene592;Dbxref=Genbank:NP_687533.1,GeneID:1013306;Name=NP_687533.1;Note=identified by match to PFAM protein family HMM PF00657%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=lipase/acylhydrolase;protein_id=NP_687533.1;transl_table=11
NC_004116.1	RefSeq	gene	517264	517866	.	+	.	ID=gene593;Dbxref=GeneID:1013307;Name=SAG0504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0504
NC_004116.1	RefSeq	CDS	517264	517866	.	+	0	ID=cds497;Parent=gene593;Dbxref=Genbank:NP_687534.1,GeneID:1013307;Name=NP_687534.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687534.1;transl_table=11
NC_004116.1	RefSeq	gene	517969	518244	.	+	.	ID=gene594;Dbxref=GeneID:1013308;Name=hup;gbkey=Gene;gene=hup;gene_biotype=protein_coding;locus_tag=SAG0505
NC_004116.1	RefSeq	CDS	517969	518244	.	+	0	ID=cds498;Parent=gene594;Dbxref=Genbank:NP_687535.1,GeneID:1013308;Name=NP_687535.1;Note=identified by match to PFAM protein family HMM PF00216;gbkey=CDS;gene=hup;product=DNA-binding protein HU;protein_id=NP_687535.1;transl_table=11
NC_004116.1	RefSeq	gene	518441	518638	.	+	.	ID=gene595;Dbxref=GeneID:1013309;Name=SAG0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0506
NC_004116.1	RefSeq	CDS	518441	518638	.	+	0	ID=cds499;Parent=gene595;Dbxref=Genbank:NP_687536.1,GeneID:1013309;Name=NP_687536.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687536.1;transl_table=11
NC_004116.1	RefSeq	gene	518682	519614	.	-	.	ID=gene596;Dbxref=GeneID:1013310;Name=pyrDA;gbkey=Gene;gene=pyrDA;gene_biotype=protein_coding;locus_tag=SAG0507
NC_004116.1	RefSeq	CDS	518682	519614	.	-	0	ID=cds500;Parent=gene596;Dbxref=Genbank:NP_687537.1,GeneID:1013310;Name=NP_687537.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B subclass 1A is a dimer formed by two identical PyrD subunits each containing an FMN group;gbkey=CDS;gene=pyrDA;product=dihydroorotate dehydrogenase 1A;protein_id=NP_687537.1;transl_table=11
NC_004116.1	RefSeq	gene	519801	521036	.	-	.	ID=gene597;Dbxref=GeneID:1013311;Name=fibB;gbkey=Gene;gene=fibB;gene_biotype=protein_coding;locus_tag=SAG0508
NC_004116.1	RefSeq	CDS	519801	521036	.	-	0	ID=cds501;Parent=gene597;Dbxref=Genbank:NP_687538.1,GeneID:1013311;Name=NP_687538.1;Note=identified by match to PFAM protein family HMM PF02388;gbkey=CDS;gene=fibB;product=beta-lactam resistance factor;protein_id=NP_687538.1;transl_table=11
NC_004116.1	RefSeq	gene	521055	522266	.	-	.	ID=gene598;Dbxref=GeneID:1013312;Name=fibA;gbkey=Gene;gene=fibA;gene_biotype=protein_coding;locus_tag=SAG0509
NC_004116.1	RefSeq	CDS	521055	522266	.	-	0	ID=cds502;Parent=gene598;Dbxref=Genbank:NP_687539.1,GeneID:1013312;Name=NP_687539.1;Note=identified by match to PFAM protein family HMM PF02388;gbkey=CDS;gene=fibA;product=beta-lactam resistance factor;protein_id=NP_687539.1;transl_table=11
NC_004116.1	RefSeq	gene	522279	523499	.	-	.	ID=gene599;Dbxref=GeneID:1013313;Name=SAG0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0510
NC_004116.1	RefSeq	CDS	522279	523499	.	-	0	ID=cds503;Parent=gene599;Dbxref=Genbank:NP_687540.1,GeneID:1013313;Name=NP_687540.1;Note=identified by match to PFAM protein family HMM PF02388;gbkey=CDS;product=MurM protein;protein_id=NP_687540.1;transl_table=11
NC_004116.1	RefSeq	gene	523499	524311	.	-	.	ID=gene600;Dbxref=GeneID:1013314;Name=SAG0511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0511
NC_004116.1	RefSeq	CDS	523499	524311	.	-	0	ID=cds504;Parent=gene600;Dbxref=Genbank:NP_687541.1,GeneID:1013314;Name=NP_687541.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687541.1;transl_table=11
NC_004116.1	RefSeq	gene	524382	525698	.	-	.	ID=gene601;Dbxref=GeneID:1013315;Name=SAG0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0512
NC_004116.1	RefSeq	CDS	524382	525698	.	-	0	ID=cds505;Parent=gene601;Dbxref=Genbank:NP_687542.1,GeneID:1013315;Name=NP_687542.1;Note=identified by match to PFAM protein family HMM PF01966;gbkey=CDS;product=HD domain-containing protein;protein_id=NP_687542.1;transl_table=11
NC_004116.1	RefSeq	gene	525774	526160	.	+	.	ID=gene602;Dbxref=GeneID:1013316;Name=SAG0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0513
NC_004116.1	RefSeq	CDS	525774	526160	.	+	0	ID=cds506;Parent=gene602;Dbxref=Genbank:NP_687543.1,GeneID:1013316;Name=NP_687543.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687543.1;transl_table=11
NC_004116.1	RefSeq	gene	526504	529188	.	+	.	ID=gene603;Dbxref=GeneID:1013317;Name=SAG0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0514
NC_004116.1	RefSeq	CDS	526504	529188	.	+	0	ID=cds507;Parent=gene603;Dbxref=Genbank:NP_687544.1,GeneID:1013317;Name=NP_687544.1;Note=identified by match to PFAM protein family HMM PF00122;gbkey=CDS;product=cation transporter E1-E2 family ATPase;protein_id=NP_687544.1;transl_table=11
NC_004116.1	RefSeq	gene	529233	530093	.	-	.	ID=gene604;Dbxref=GeneID:1013318;Name=SAG0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0515
NC_004116.1	RefSeq	CDS	529233	530093	.	-	0	ID=cds508;Parent=gene604;Dbxref=Genbank:NP_687545.1,GeneID:1013318;Name=NP_687545.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687545.1;transl_table=11
NC_004116.1	RefSeq	gene	530245	532176	.	+	.	ID=gene605;Dbxref=GeneID:1013319;Name=SAG0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0516
NC_004116.1	RefSeq	CDS	530245	532176	.	+	0	ID=cds509;Parent=gene605;Dbxref=Genbank:NP_687546.1,GeneID:1013319;Name=NP_687546.1;Note=similar to PID:1064791 GB:AL009126%3B identified by sequence similarity;gbkey=CDS;product=fructose-1%2C6-bisphosphatase;protein_id=NP_687546.1;transl_table=11
NC_004116.1	RefSeq	gene	532266	533390	.	+	.	ID=gene606;Dbxref=GeneID:1013320;Name=SAG0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0517
NC_004116.1	RefSeq	CDS	532266	533390	.	+	0	ID=cds510;Parent=gene606;Dbxref=Genbank:NP_687547.1,GeneID:1013320;Name=NP_687547.1;Note=identified by match to PFAM protein family HMM PF00037;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=NP_687547.1;transl_table=11
NC_004116.1	RefSeq	gene	533459	534557	.	+	.	ID=gene607;Dbxref=GeneID:1013321;Name=prfB;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to SP:P28367 PID:216335 PID:2331287 GB:AL009126%3B identified by sequence similarity%3B peptide chain release factor 2%2C programmed frameshift;gbkey=Gene;gene=prfB;gene_biotype=other;locus_tag=SAG0518
NC_004116.1	RefSeq	gene	534576	535268	.	+	.	ID=gene608;Dbxref=GeneID:1013322;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=SAG0519
NC_004116.1	RefSeq	CDS	534576	535268	.	+	0	ID=cds511;Parent=gene608;Dbxref=Genbank:NP_687548.1,GeneID:1013322;Name=NP_687548.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=ftsE;product=cell division ABC transporter ATP-binding protein FtsE;protein_id=NP_687548.1;transl_table=11
NC_004116.1	RefSeq	gene	535252	536181	.	+	.	ID=gene609;Dbxref=GeneID:1013323;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SAG0520
NC_004116.1	RefSeq	CDS	535252	536181	.	+	0	ID=cds512;Parent=gene609;Dbxref=Genbank:NP_687549.1,GeneID:1013323;Name=NP_687549.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;gene=ftsX;product=cell division ABC transporter permease FtsX;protein_id=NP_687549.1;transl_table=11
NC_004116.1	RefSeq	gene	536234	536944	.	-	.	ID=gene610;Dbxref=GeneID:1013324;Name=SAG0521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0521
NC_004116.1	RefSeq	CDS	536234	536944	.	-	0	ID=cds513;Parent=gene610;Dbxref=Genbank:NP_687550.1,GeneID:1013324;Name=NP_687550.1;Note=similar to OMNI:EF0274%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687550.1;transl_table=11
NC_004116.1	RefSeq	gene	536941	537639	.	-	.	ID=gene611;Dbxref=GeneID:1013325;Name=SAG0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0522
NC_004116.1	RefSeq	CDS	536941	537639	.	-	0	ID=cds514;Parent=gene611;Dbxref=Genbank:NP_687551.1,GeneID:1013325;Name=NP_687551.1;Note=identified by match to PFAM protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=NP_687551.1;transl_table=11
NC_004116.1	RefSeq	gene	537807	538571	.	+	.	ID=gene612;Dbxref=GeneID:1013326;Name=SAG0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0523
NC_004116.1	RefSeq	CDS	537807	538571	.	+	0	ID=cds515;Parent=gene612;Dbxref=Genbank:NP_687552.1,GeneID:1013326;Name=NP_687552.1;Note=identified by match to PFAM protein family HMM PF00106;gbkey=CDS;product=acetoin reductase;protein_id=NP_687552.1;transl_table=11
NC_004116.1	RefSeq	gene	538679	541186	.	+	.	ID=gene613;Dbxref=GeneID:1013327;Name=SAG0524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0524
NC_004116.1	RefSeq	CDS	538679	541186	.	+	0	ID=cds516;Parent=gene613;Dbxref=Genbank:NP_687553.1,GeneID:1013327;Name=NP_687553.1;Note=unwinds DNA;gbkey=CDS;product=bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon;protein_id=NP_687553.1;transl_table=11
NC_004116.1	RefSeq	gene	541272	542465	.	+	.	ID=gene614;Dbxref=GeneID:1013328;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=SAG0525
NC_004116.1	RefSeq	CDS	541272	542465	.	+	0	ID=cds517;Parent=gene614;Dbxref=Genbank:NP_687554.1,GeneID:1013328;Name=NP_687554.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;gene=aspC;product=aspartate aminotransferase;protein_id=NP_687554.1;transl_table=11
NC_004116.1	RefSeq	gene	542486	543832	.	+	.	ID=gene615;Dbxref=GeneID:1013329;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=SAG0526
NC_004116.1	RefSeq	CDS	542486	543832	.	+	0	ID=cds518;Parent=gene615;Dbxref=Genbank:NP_687555.1,GeneID:1013329;Name=NP_687555.1;Note=catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=asnC;product=asparaginyl-tRNA synthetase;protein_id=NP_687555.1;transl_table=11
NC_004116.1	RefSeq	gene	543872	544429	.	-	.	ID=gene616;Dbxref=GeneID:1013330;Name=SAG0527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0527
NC_004116.1	RefSeq	CDS	543872	544429	.	-	0	ID=cds519;Parent=gene616;Dbxref=Genbank:NP_687556.1,GeneID:1013330;Name=NP_687556.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687556.1;transl_table=11
NC_004116.1	RefSeq	gene	544426	545409	.	-	.	ID=gene617;Dbxref=GeneID:1013331;Name=SAG0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0528
NC_004116.1	RefSeq	CDS	544426	545409	.	-	0	ID=cds520;Parent=gene617;Dbxref=Genbank:NP_687557.1,GeneID:1013331;Name=NP_687557.1;Note=identified by match to PFAM protein family HMM PF01156;gbkey=CDS;product=inosine-uridine preferring nucleoside hydrolase;protein_id=NP_687557.1;transl_table=11
NC_004116.1	RefSeq	gene	545442	545558	.	-	.	ID=gene618;Dbxref=GeneID:1013332;Name=SAG0529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0529
NC_004116.1	RefSeq	CDS	545442	545558	.	-	0	ID=cds521;Parent=gene618;Dbxref=Genbank:NP_687558.1,GeneID:1013332;Name=NP_687558.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687558.1;transl_table=11
NC_004116.1	RefSeq	gene	545655	546068	.	-	.	ID=gene619;Dbxref=GeneID:1013333;Name=SAG0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0530
NC_004116.1	RefSeq	CDS	545655	546068	.	-	0	ID=cds522;Parent=gene619;Dbxref=Genbank:NP_687559.1,GeneID:1013333;Name=NP_687559.1;Note=identified by match to PFAM protein family HMM PF02566;gbkey=CDS;product=OsmC/Ohr family protein;protein_id=NP_687559.1;transl_table=11
NC_004116.1	RefSeq	gene	546222	547112	.	+	.	ID=gene620;Dbxref=GeneID:1013334;Name=SAG0531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0531
NC_004116.1	RefSeq	CDS	546222	547112	.	+	0	ID=cds523;Parent=gene620;Dbxref=Genbank:NP_687560.1,GeneID:1013334;Name=NP_687560.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687560.1;transl_table=11
NC_004116.1	RefSeq	gene	547109	548083	.	+	.	ID=gene621;Dbxref=GeneID:1013335;Name=SAG0532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0532
NC_004116.1	RefSeq	CDS	547109	548083	.	+	0	ID=cds524;Parent=gene621;Dbxref=Genbank:NP_687561.1,GeneID:1013335;Name=NP_687561.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687561.1;transl_table=11
NC_004116.1	RefSeq	gene	548080	548991	.	+	.	ID=gene622;Dbxref=GeneID:1013336;Name=SAG0533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0533
NC_004116.1	RefSeq	CDS	548080	548991	.	+	0	ID=cds525;Parent=gene622;Dbxref=Genbank:NP_687562.1,GeneID:1013336;Name=NP_687562.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687562.1;transl_table=11
NC_004116.1	RefSeq	gene	549006	550403	.	+	.	ID=gene623;Dbxref=GeneID:1013337;Name=SAG0534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0534
NC_004116.1	RefSeq	CDS	549006	550403	.	+	0	ID=cds526;Parent=gene623;Dbxref=Genbank:NP_687563.1,GeneID:1013337;Name=NP_687563.1;Note=similar to OMNI:NTL01LL1596%3B identified by sequence similarity;gbkey=CDS;product=dipeptidase;protein_id=NP_687563.1;transl_table=11
NC_004116.1	RefSeq	gene	550545	552065	.	+	.	ID=gene624;Dbxref=GeneID:1013338;Name=SAG0535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0535
NC_004116.1	RefSeq	CDS	550545	552065	.	+	0	ID=cds527;Parent=gene624;Dbxref=Genbank:NP_687564.1,GeneID:1013338;Name=NP_687564.1;Note=identified by match to PFAM protein family HMM PF01297;gbkey=CDS;product=zinc ABC transporter substrate-binding protein;protein_id=NP_687564.1;transl_table=11
NC_004116.1	RefSeq	gene	552178	552438	.	-	.	ID=gene625;Dbxref=GeneID:1013339;Name=rpmE2;gbkey=Gene;gene=rpmE2;gene_biotype=protein_coding;locus_tag=SAG0536
NC_004116.1	RefSeq	CDS	552178	552438	.	-	0	ID=cds528;Parent=gene625;Dbxref=Genbank:NP_687565.1,GeneID:1013339;Name=NP_687565.1;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE2;product=50S ribosomal protein L31;protein_id=NP_687565.1;transl_table=11
NC_004116.1	RefSeq	gene	552547	553482	.	-	.	ID=gene626;Dbxref=GeneID:1013340;Name=SAG0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0537
NC_004116.1	RefSeq	CDS	552547	553482	.	-	0	ID=cds529;Parent=gene626;Dbxref=Genbank:NP_687566.1,GeneID:1013340;Name=NP_687566.1;Note=identified by match to PFAM protein family HMM PF01368;gbkey=CDS;product=DHH family protein;protein_id=NP_687566.1;transl_table=11
NC_004116.1	RefSeq	gene	553748	554770	.	+	.	ID=gene627;Dbxref=GeneID:1013341;Name=SAG0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0538
NC_004116.1	RefSeq	CDS	553748	554770	.	+	0	ID=cds530;Parent=gene627;Dbxref=Genbank:NP_687567.1,GeneID:1013341;Name=NP_687567.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;product=adenosine deaminase;protein_id=NP_687567.1;transl_table=11
NC_004116.1	RefSeq	gene	554829	555272	.	+	.	ID=gene628;Dbxref=GeneID:1013342;Name=SAG0539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0539
NC_004116.1	RefSeq	CDS	554829	555272	.	+	0	ID=cds531;Parent=gene628;Dbxref=Genbank:NP_687568.1,GeneID:1013342;Name=NP_687568.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=NP_687568.1;transl_table=11
NC_004116.1	RefSeq	gene	555349	555624	.	+	.	ID=gene629;Dbxref=GeneID:1013343;Name=SAG0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0540
NC_004116.1	RefSeq	CDS	555349	555624	.	+	0	ID=cds532;Parent=gene629;Dbxref=Genbank:NP_687569.1,GeneID:1013343;Name=NP_687569.1;Note=identified by match to PFAM protein family HMM PF01817;gbkey=CDS;product=hypothetical protein;protein_id=NP_687569.1;transl_table=11
NC_004116.1	RefSeq	gene	555617	556813	.	+	.	ID=gene630;Dbxref=GeneID:1013344;Name=SAG0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0541
NC_004116.1	RefSeq	CDS	555617	556813	.	+	0	ID=cds533;Parent=gene630;Dbxref=Genbank:NP_687570.1,GeneID:1013344;Name=NP_687570.1;Note=identified by match to PFAM protein family HMM PF00654;gbkey=CDS;product=voltage-gated chloride channel family protein;protein_id=NP_687570.1;transl_table=11
NC_004116.1	RefSeq	gene	557266	557649	.	+	.	ID=gene631;Dbxref=GeneID:1013345;Name=SAG0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0542
NC_004116.1	RefSeq	CDS	557266	557649	.	+	0	ID=cds534;Parent=gene631;Dbxref=Genbank:NP_687571.1,GeneID:1013345;Name=NP_687571.1;Note=similar to OMNI:SP0537%3B identified by sequence similarity;gbkey=CDS;product=IS1381 transposase protein A;protein_id=NP_687571.1;transl_table=11
NC_004116.1	RefSeq	gene	557682	558071	.	+	.	ID=gene632;Dbxref=GeneID:1013346;Name=SAG0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0543
NC_004116.1	RefSeq	CDS	557682	558071	.	+	0	ID=cds535;Parent=gene632;Dbxref=Genbank:NP_687572.1,GeneID:1013346;Name=NP_687572.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1381 transposase protein B;protein_id=NP_687572.1;transl_table=11
NC_004116.1	RefSeq	gene	558254	558601	.	+	.	ID=gene633;Dbxref=GeneID:1013347;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SAG0544
NC_004116.1	RefSeq	CDS	558254	558601	.	+	0	ID=cds536;Parent=gene633;Dbxref=Genbank:NP_687573.1,GeneID:1013347;Name=NP_687573.1;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=NP_687573.1;transl_table=11
NC_004116.1	RefSeq	gene	558712	558783	.	+	.	ID=gene634;Dbxref=GeneID:1013348;Name=tRNA-Arg-5;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Arg-5
NC_004116.1	RefSeq	tRNA	558712	558783	.	+	.	ID=rna90;Parent=gene634;Dbxref=GeneID:1013348;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	exon	558712	558783	.	+	.	ID=id91;Parent=rna90;Dbxref=GeneID:1013348;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	region	558765	599345	.	+	.	ID=id92;Note=lysogenic prophage LambdaSa1 region%3B nonfunctional prophage;gbkey=misc_feature
NC_004116.1	RefSeq	gene	558826	559905	.	-	.	ID=gene635;Dbxref=GeneID:1013349;Name=SAG0545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0545
NC_004116.1	RefSeq	CDS	558826	559905	.	-	0	ID=cds537;Parent=gene635;Dbxref=Genbank:NP_687574.1,GeneID:1013349;Name=NP_687574.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=prophage LambdaSa1%2C site-specific recombinase phage integrase family protein;protein_id=NP_687574.1;transl_table=11
NC_004116.1	RefSeq	gene	560028	560231	.	-	.	ID=gene636;Dbxref=GeneID:1013350;Name=SAG0546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0546
NC_004116.1	RefSeq	CDS	560028	560231	.	-	0	ID=cds538;Parent=gene636;Dbxref=Genbank:NP_687575.1,GeneID:1013350;Name=NP_687575.1;Note=similar to GP:2444082%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687575.1;transl_table=11
NC_004116.1	RefSeq	gene	560334	560891	.	-	.	ID=gene637;Dbxref=GeneID:1013351;Name=SAG0547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0547
NC_004116.1	RefSeq	CDS	560334	560891	.	-	0	ID=cds539;Parent=gene637;Dbxref=Genbank:NP_687576.1,GeneID:1013351;Name=NP_687576.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687576.1;transl_table=11
NC_004116.1	RefSeq	gene	560893	561690	.	-	.	ID=gene638;Dbxref=GeneID:1013352;Name=SAG0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0548
NC_004116.1	RefSeq	CDS	560893	561690	.	-	0	ID=cds540;Parent=gene638;Dbxref=Genbank:NP_687577.1,GeneID:1013352;Name=NP_687577.1;Note=identified by match to PFAM protein family HMM PF00717;gbkey=CDS;product=prophage LambdaSa1%2C repressor protein;protein_id=NP_687577.1;transl_table=11
NC_004116.1	RefSeq	gene	562051	562194	.	+	.	ID=gene639;Dbxref=GeneID:1013353;Name=SAG0549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0549
NC_004116.1	RefSeq	CDS	562051	562194	.	+	0	ID=cds541;Parent=gene639;Dbxref=Genbank:NP_687578.1,GeneID:1013353;Name=NP_687578.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687578.1;transl_table=11
NC_004116.1	RefSeq	gene	562191	562415	.	-	.	ID=gene640;Dbxref=GeneID:1013354;Name=SAG0550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0550
NC_004116.1	RefSeq	CDS	562191	562415	.	-	0	ID=cds542;Parent=gene640;Dbxref=Genbank:NP_687579.1,GeneID:1013354;Name=NP_687579.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687579.1;transl_table=11
NC_004116.1	RefSeq	gene	562474	562632	.	+	.	ID=gene641;Dbxref=GeneID:1013355;Name=SAG0551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0551
NC_004116.1	RefSeq	CDS	562474	562632	.	+	0	ID=cds543;Parent=gene641;Dbxref=Genbank:NP_687580.1,GeneID:1013355;Name=NP_687580.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687580.1;transl_table=11
NC_004116.1	RefSeq	gene	562662	562850	.	+	.	ID=gene642;Dbxref=GeneID:1013356;Name=SAG0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0552
NC_004116.1	RefSeq	CDS	562662	562850	.	+	0	ID=cds544;Parent=gene642;Dbxref=Genbank:NP_687581.1,GeneID:1013356;Name=NP_687581.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687581.1;transl_table=11
NC_004116.1	RefSeq	gene	562833	563639	.	-	.	ID=gene643;Dbxref=GeneID:1013357;Name=SAG0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0553
NC_004116.1	RefSeq	CDS	562833	563639	.	-	0	ID=cds545;Parent=gene643;Dbxref=Genbank:NP_687582.1,GeneID:1013357;Name=NP_687582.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687582.1;transl_table=11
NC_004116.1	RefSeq	gene	563691	563882	.	+	.	ID=gene644;Dbxref=GeneID:1013358;Name=SAG0554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0554
NC_004116.1	RefSeq	CDS	563691	563882	.	+	0	ID=cds546;Parent=gene644;Dbxref=Genbank:NP_687583.1,GeneID:1013358;Name=NP_687583.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=prophage LambdaSa1%2C Cro/CI family transcriptional regulator;protein_id=NP_687583.1;transl_table=11
NC_004116.1	RefSeq	gene	563950	564699	.	+	.	ID=gene645;Dbxref=GeneID:1013359;Name=SAG0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0555
NC_004116.1	RefSeq	CDS	563950	564699	.	+	0	ID=cds547;Parent=gene645;Dbxref=Genbank:NP_687584.1,GeneID:1013359;Name=NP_687584.1;gbkey=CDS;product=prophage LambdaSa1%2C antirepressor;protein_id=NP_687584.1;transl_table=11
NC_004116.1	RefSeq	gene	564711	564854	.	+	.	ID=gene646;Dbxref=GeneID:1013360;Name=SAG0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0556
NC_004116.1	RefSeq	CDS	564711	564854	.	+	0	ID=cds548;Parent=gene646;Dbxref=Genbank:NP_687585.1,GeneID:1013360;Name=NP_687585.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687585.1;transl_table=11
NC_004116.1	RefSeq	gene	565004	565234	.	+	.	ID=gene647;Dbxref=GeneID:1013361;Name=SAG0557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0557
NC_004116.1	RefSeq	CDS	565004	565234	.	+	0	ID=cds549;Parent=gene647;Dbxref=Genbank:NP_687586.1,GeneID:1013361;Name=NP_687586.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687586.1;transl_table=11
NC_004116.1	RefSeq	gene	565372	565596	.	+	.	ID=gene648;Dbxref=GeneID:1013362;Name=SAG0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0558
NC_004116.1	RefSeq	CDS	565372	565596	.	+	0	ID=cds550;Parent=gene648;Dbxref=Genbank:NP_687587.1,GeneID:1013362;Name=NP_687587.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687587.1;transl_table=11
NC_004116.1	RefSeq	gene	565607	566467	.	+	.	ID=gene649;Dbxref=GeneID:1013363;Name=SAG0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0559
NC_004116.1	RefSeq	CDS	565607	566467	.	+	0	ID=cds551;Parent=gene649;Dbxref=Genbank:NP_687588.1,GeneID:1013363;Name=NP_687588.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687588.1;transl_table=11
NC_004116.1	RefSeq	gene	566448	566681	.	+	.	ID=gene650;Dbxref=GeneID:1013364;Name=SAG0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0560
NC_004116.1	RefSeq	CDS	566448	566681	.	+	0	ID=cds552;Parent=gene650;Dbxref=Genbank:NP_687589.1,GeneID:1013364;Name=NP_687589.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687589.1;transl_table=11
NC_004116.1	RefSeq	gene	566678	566818	.	+	.	ID=gene651;Dbxref=GeneID:1013365;Name=SAG0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0561
NC_004116.1	RefSeq	CDS	566678	566818	.	+	0	ID=cds553;Parent=gene651;Dbxref=Genbank:NP_687590.1,GeneID:1013365;Name=NP_687590.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687590.1;transl_table=11
NC_004116.1	RefSeq	gene	566829	567083	.	+	.	ID=gene652;Dbxref=GeneID:1013366;Name=SAG0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0562
NC_004116.1	RefSeq	CDS	566829	567083	.	+	0	ID=cds554;Parent=gene652;Dbxref=Genbank:NP_687591.1,GeneID:1013366;Name=NP_687591.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687591.1;transl_table=11
NC_004116.1	RefSeq	gene	567086	567247	.	+	.	ID=gene653;Dbxref=GeneID:1013367;Name=SAG0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0563
NC_004116.1	RefSeq	CDS	567086	567247	.	+	0	ID=cds555;Parent=gene653;Dbxref=Genbank:NP_687592.1,GeneID:1013367;Name=NP_687592.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687592.1;transl_table=11
NC_004116.1	RefSeq	gene	567249	567731	.	+	.	ID=gene654;Dbxref=GeneID:1013368;Name=SAG0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0564
NC_004116.1	RefSeq	CDS	567249	567731	.	+	0	ID=cds556;Parent=gene654;Dbxref=Genbank:NP_687593.1,GeneID:1013368;Name=NP_687593.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687593.1;transl_table=11
NC_004116.1	RefSeq	gene	567732	568406	.	+	.	ID=gene655;Dbxref=GeneID:1013369;Name=SAG0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0565
NC_004116.1	RefSeq	CDS	567732	568406	.	+	0	ID=cds557;Parent=gene655;Dbxref=Genbank:NP_687594.1,GeneID:1013369;Name=NP_687594.1;Note=similar to GP:8918764%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687594.1;transl_table=11
NC_004116.1	RefSeq	gene	568399	568815	.	+	.	ID=gene656;Dbxref=GeneID:1013370;Name=ssb-2;gbkey=Gene;gene=ssb-2;gene_biotype=protein_coding;locus_tag=SAG0566
NC_004116.1	RefSeq	CDS	568399	568815	.	+	0	ID=cds558;Parent=gene656;Dbxref=Genbank:NP_687595.1,GeneID:1013370;Name=NP_687595.1;Note=identified by match to PFAM protein family HMM PF00436;gbkey=CDS;gene=ssb-2;product=prophage LambdaSa1%2C single-strand binding protein;protein_id=NP_687595.1;transl_table=11
NC_004116.1	RefSeq	gene	569396	570715	.	+	.	ID=gene657;Dbxref=GeneID:1013371;Name=SAG0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0567
NC_004116.1	RefSeq	CDS	569396	570715	.	+	0	ID=cds559;Parent=gene657;Dbxref=Genbank:NP_687596.1,GeneID:1013371;Name=NP_687596.1;Note=identified by match to PFAM protein family HMM PF00078;gbkey=CDS;product=prophage LambdaSa1%2C reverse transcriptase/maturase family protein;protein_id=NP_687596.1;transl_table=11
NC_004116.1	RefSeq	gene	570841	571044	.	+	.	ID=gene658;Dbxref=GeneID:1013372;Name=SAG0568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0568
NC_004116.1	RefSeq	CDS	570841	571044	.	+	0	ID=cds560;Parent=gene658;Dbxref=Genbank:NP_687597.1,GeneID:1013372;Name=NP_687597.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687597.1;transl_table=11
NC_004116.1	RefSeq	gene	571034	571510	.	+	.	ID=gene659;Dbxref=GeneID:1013373;Name=SAG0569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0569
NC_004116.1	RefSeq	CDS	571034	571510	.	+	0	ID=cds561;Parent=gene659;Dbxref=Genbank:NP_687598.1,GeneID:1013373;Name=NP_687598.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687598.1;transl_table=11
NC_004116.1	RefSeq	gene	571500	571847	.	+	.	ID=gene660;Dbxref=GeneID:1013374;Name=SAG0570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0570
NC_004116.1	RefSeq	CDS	571500	571847	.	+	0	ID=cds562;Parent=gene660;Dbxref=Genbank:NP_687599.1,GeneID:1013374;Name=NP_687599.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687599.1;transl_table=11
NC_004116.1	RefSeq	gene	571859	572161	.	+	.	ID=gene661;Dbxref=GeneID:17097509;Name=SAG_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG_RS02245
NC_004116.1	RefSeq	CDS	571859	572161	.	+	0	ID=cds563;Parent=gene661;Dbxref=Genbank:YP_008592386.1,GeneID:17097509;Name=YP_008592386.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_008592386.1;transl_table=11
NC_004116.1	RefSeq	gene	572165	572296	.	+	.	ID=gene662;Dbxref=GeneID:1013375;Name=SAG0571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0571
NC_004116.1	RefSeq	CDS	572165	572296	.	+	0	ID=cds564;Parent=gene662;Dbxref=Genbank:NP_687600.1,GeneID:1013375;Name=NP_687600.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687600.1;transl_table=11
NC_004116.1	RefSeq	gene	572296	572712	.	+	.	ID=gene663;Dbxref=GeneID:1013376;Name=SAG0572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0572
NC_004116.1	RefSeq	CDS	572296	572712	.	+	0	ID=cds565;Parent=gene663;Dbxref=Genbank:NP_687601.1,GeneID:1013376;Name=NP_687601.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687601.1;transl_table=11
NC_004116.1	RefSeq	gene	572709	572873	.	+	.	ID=gene664;Dbxref=GeneID:1013377;Name=SAG0573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0573
NC_004116.1	RefSeq	CDS	572709	572873	.	+	0	ID=cds566;Parent=gene664;Dbxref=Genbank:NP_687602.1,GeneID:1013377;Name=NP_687602.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687602.1;transl_table=11
NC_004116.1	RefSeq	gene	572870	573139	.	+	.	ID=gene665;Dbxref=GeneID:1013378;Name=SAG0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0574
NC_004116.1	RefSeq	CDS	572870	573139	.	+	0	ID=cds567;Parent=gene665;Dbxref=Genbank:NP_687603.1,GeneID:1013378;Name=NP_687603.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687603.1;transl_table=11
NC_004116.1	RefSeq	gene	573142	573474	.	+	.	ID=gene666;Dbxref=GeneID:1013379;Name=SAG0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0575
NC_004116.1	RefSeq	CDS	573142	573474	.	+	0	ID=cds568;Parent=gene666;Dbxref=Genbank:NP_687604.1,GeneID:1013379;Name=NP_687604.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687604.1;transl_table=11
NC_004116.1	RefSeq	gene	573557	573688	.	+	.	ID=gene667;Dbxref=GeneID:1013380;Name=SAG0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0576
NC_004116.1	RefSeq	CDS	573557	573688	.	+	0	ID=cds569;Parent=gene667;Dbxref=Genbank:NP_687605.1,GeneID:1013380;Name=NP_687605.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687605.1;transl_table=11
NC_004116.1	RefSeq	gene	573781	574314	.	+	.	ID=gene668;Dbxref=GeneID:1013381;Name=SAG0577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0577
NC_004116.1	RefSeq	CDS	573781	574314	.	+	0	ID=cds570;Parent=gene668;Dbxref=Genbank:NP_687606.1,GeneID:1013381;Name=NP_687606.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687606.1;transl_table=11
NC_004116.1	RefSeq	gene	574311	574577	.	+	.	ID=gene669;Dbxref=GeneID:1013382;Name=SAG0578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0578
NC_004116.1	RefSeq	CDS	574311	574577	.	+	0	ID=cds571;Parent=gene669;Dbxref=Genbank:NP_687607.1,GeneID:1013382;Name=NP_687607.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687607.1;transl_table=11
NC_004116.1	RefSeq	gene	574965	575393	.	+	.	ID=gene670;Dbxref=GeneID:1013383;Name=SAG0579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0579
NC_004116.1	RefSeq	CDS	574965	575393	.	+	0	ID=cds572;Parent=gene670;Dbxref=Genbank:NP_687608.1,GeneID:1013383;Name=NP_687608.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687608.1;transl_table=11
NC_004116.1	RefSeq	gene	576018	576353	.	+	.	ID=gene671;Dbxref=GeneID:1013384;Name=SAG0580;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0580
NC_004116.1	RefSeq	gene	576505	576861	.	+	.	ID=gene672;Dbxref=GeneID:1013385;Name=SAG0581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0581
NC_004116.1	RefSeq	CDS	576505	576861	.	+	0	ID=cds573;Parent=gene672;Dbxref=Genbank:NP_687609.1,GeneID:1013385;Name=NP_687609.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687609.1;transl_table=11
NC_004116.1	RefSeq	gene	576858	578126	.	+	.	ID=gene673;Dbxref=GeneID:1013386;Name=SAG0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0582
NC_004116.1	RefSeq	CDS	576858	578126	.	+	0	ID=cds574;Parent=gene673;Dbxref=Genbank:NP_687610.1,GeneID:1013386;Name=NP_687610.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687610.1;transl_table=11
NC_004116.1	RefSeq	gene	578119	579339	.	+	.	ID=gene674;Dbxref=GeneID:1013387;Name=SAG0583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0583
NC_004116.1	RefSeq	CDS	578119	579339	.	+	0	ID=cds575;Parent=gene674;Dbxref=Genbank:NP_687611.1,GeneID:1013387;Name=NP_687611.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687611.1;transl_table=11
NC_004116.1	RefSeq	gene	579339	579527	.	+	.	ID=gene675;Dbxref=GeneID:1013388;Name=SAG0584;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0584
NC_004116.1	RefSeq	gene	579635	581050	.	+	.	ID=gene676;Dbxref=GeneID:1013389;Name=SAG0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0585
NC_004116.1	RefSeq	CDS	579635	581050	.	+	0	ID=cds576;Parent=gene676;Dbxref=Genbank:NP_687612.1,GeneID:1013389;Name=NP_687612.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687612.1;transl_table=11
NC_004116.1	RefSeq	gene	581131	581595	.	+	.	ID=gene677;Dbxref=GeneID:1013390;Name=SAG0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0586
NC_004116.1	RefSeq	CDS	581131	581595	.	+	0	ID=cds577;Parent=gene677;Dbxref=Genbank:NP_687613.1,GeneID:1013390;Name=NP_687613.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687613.1;transl_table=11
NC_004116.1	RefSeq	gene	581598	582500	.	+	.	ID=gene678;Dbxref=GeneID:1013391;Name=SAG0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0587
NC_004116.1	RefSeq	CDS	581598	582500	.	+	0	ID=cds578;Parent=gene678;Dbxref=Genbank:NP_687614.1,GeneID:1013391;Name=NP_687614.1;Note=similar to PID:1353548%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa1%2C structural protein;protein_id=NP_687614.1;transl_table=11
NC_004116.1	RefSeq	gene	582497	582712	.	+	.	ID=gene679;Dbxref=GeneID:1013392;Name=SAG0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0588
NC_004116.1	RefSeq	CDS	582497	582712	.	+	0	ID=cds579;Parent=gene679;Dbxref=Genbank:NP_687615.1,GeneID:1013392;Name=NP_687615.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687615.1;transl_table=11
NC_004116.1	RefSeq	gene	582726	583157	.	+	.	ID=gene680;Dbxref=GeneID:1013393;Name=SAG0589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0589
NC_004116.1	RefSeq	CDS	582726	583157	.	+	0	ID=cds580;Parent=gene680;Dbxref=Genbank:NP_687616.1,GeneID:1013393;Name=NP_687616.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687616.1;transl_table=11
NC_004116.1	RefSeq	gene	583108	583446	.	+	.	ID=gene681;Dbxref=GeneID:1013394;Name=SAG0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0590
NC_004116.1	RefSeq	CDS	583108	583446	.	+	0	ID=cds581;Parent=gene681;Dbxref=Genbank:NP_687617.1,GeneID:1013394;Name=NP_687617.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687617.1;transl_table=11
NC_004116.1	RefSeq	gene	583439	583675	.	+	.	ID=gene682;Dbxref=GeneID:1013395;Name=SAG0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0591
NC_004116.1	RefSeq	CDS	583439	583675	.	+	0	ID=cds582;Parent=gene682;Dbxref=Genbank:NP_687618.1,GeneID:1013395;Name=NP_687618.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687618.1;transl_table=11
NC_004116.1	RefSeq	gene	583676	584011	.	+	.	ID=gene683;Dbxref=GeneID:1013396;Name=SAG0592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0592
NC_004116.1	RefSeq	CDS	583676	584011	.	+	0	ID=cds583;Parent=gene683;Dbxref=Genbank:NP_687619.1,GeneID:1013396;Name=NP_687619.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687619.1;transl_table=11
NC_004116.1	RefSeq	gene	584021	584578	.	+	.	ID=gene684;Dbxref=GeneID:1013397;Name=SAG0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0593
NC_004116.1	RefSeq	CDS	584021	584578	.	+	0	ID=cds584;Parent=gene684;Dbxref=Genbank:NP_687620.1,GeneID:1013397;Name=NP_687620.1;Note=similar to PID:1353554%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa1%2C structural protein;protein_id=NP_687620.1;transl_table=11
NC_004116.1	RefSeq	gene	584578	584823	.	+	.	ID=gene685;Dbxref=GeneID:1013398;Name=SAG0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0594
NC_004116.1	RefSeq	CDS	584578	584823	.	+	0	ID=cds585;Parent=gene685;Dbxref=Genbank:NP_687621.1,GeneID:1013398;Name=NP_687621.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687621.1;transl_table=11
NC_004116.1	RefSeq	gene	584838	585209	.	+	.	ID=gene686;Dbxref=GeneID:1013399;Name=SAG0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0595
NC_004116.1	RefSeq	CDS	584838	585209	.	+	0	ID=cds586;Parent=gene686;Dbxref=Genbank:NP_687622.1,GeneID:1013399;Name=NP_687622.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687622.1;transl_table=11
NC_004116.1	RefSeq	gene	585209	587221	.	+	.	ID=gene687;Dbxref=GeneID:1013400;Name=SAG0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0596
NC_004116.1	RefSeq	CDS	585209	587221	.	+	0	ID=cds587;Parent=gene687;Dbxref=Genbank:NP_687623.1,GeneID:1013400;Name=NP_687623.1;Note=similar to GP:10732857%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa1%2C pblA protein%2C internal deletion;protein_id=NP_687623.1;transl_table=11
NC_004116.1	RefSeq	gene	587215	588735	.	+	.	ID=gene688;Dbxref=GeneID:1013401;Name=SAG0597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0597
NC_004116.1	RefSeq	CDS	587215	588735	.	+	0	ID=cds588;Parent=gene688;Dbxref=Genbank:NP_687624.1,GeneID:1013401;Name=NP_687624.1;Note=similar to GP:3540285%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa1%2C minor structural protein;protein_id=NP_687624.1;transl_table=11
NC_004116.1	RefSeq	gene	588736	592860	.	+	.	ID=gene689;Dbxref=GeneID:1013402;Name=SAG0598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0598
NC_004116.1	RefSeq	CDS	588736	592860	.	+	0	ID=cds589;Parent=gene689;Dbxref=Genbank:NP_687625.1,GeneID:1013402;Name=NP_687625.1;Note=identified by match to PFAM protein family HMM PF01832;gbkey=CDS;product=prophage LambdaSa1%2C N-acetylmuramoyl-L-alanine amidase family protein;protein_id=NP_687625.1;transl_table=11
NC_004116.1	RefSeq	gene	592871	594877	.	+	.	ID=gene690;Dbxref=GeneID:1013403;Name=SAG0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0599
NC_004116.1	RefSeq	CDS	592871	594877	.	+	0	ID=cds590;Parent=gene690;Dbxref=Genbank:NP_687626.1,GeneID:1013403;Name=NP_687626.1;Note=similar to GP:3540290%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa1%2C minor structural protein;protein_id=NP_687626.1;transl_table=11
NC_004116.1	RefSeq	gene	594903	595232	.	+	.	ID=gene691;Dbxref=GeneID:1013404;Name=SAG0600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0600
NC_004116.1	RefSeq	CDS	594903	595232	.	+	0	ID=cds591;Parent=gene691;Dbxref=Genbank:NP_687627.1,GeneID:1013404;Name=NP_687627.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687627.1;transl_table=11
NC_004116.1	RefSeq	gene	595207	595419	.	+	.	ID=gene692;Dbxref=GeneID:1013405;Name=SAG0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0601
NC_004116.1	RefSeq	CDS	595207	595419	.	+	0	ID=cds592;Parent=gene692;Dbxref=Genbank:NP_687628.1,GeneID:1013405;Name=NP_687628.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687628.1;transl_table=11
NC_004116.1	RefSeq	gene	595432	595734	.	+	.	ID=gene693;Dbxref=GeneID:1013406;Name=SAG0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0602
NC_004116.1	RefSeq	CDS	595432	595734	.	+	0	ID=cds593;Parent=gene693;Dbxref=Genbank:NP_687629.1,GeneID:1013406;Name=NP_687629.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687629.1;transl_table=11
NC_004116.1	RefSeq	gene	595736	596071	.	+	.	ID=gene694;Dbxref=GeneID:1013407;Name=SAG0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0603
NC_004116.1	RefSeq	CDS	595736	596071	.	+	0	ID=cds594;Parent=gene694;Dbxref=Genbank:NP_687630.1,GeneID:1013407;Name=NP_687630.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687630.1;transl_table=11
NC_004116.1	RefSeq	gene	596073	596792	.	+	.	ID=gene695;Dbxref=GeneID:1013408;Name=SAG0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0604
NC_004116.1	RefSeq	CDS	596073	596792	.	+	0	ID=cds595;Parent=gene695;Dbxref=Genbank:NP_687631.1,GeneID:1013408;Name=NP_687631.1;Note=similar to GP:1934766%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa1%2C lysin;protein_id=NP_687631.1;transl_table=11
NC_004116.1	RefSeq	gene	597125	598096	.	+	.	ID=gene696;Dbxref=GeneID:1013409;Name=SAG0605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0605
NC_004116.1	RefSeq	CDS	597125	598096	.	+	0	ID=cds596;Parent=gene696;Dbxref=Genbank:NP_687632.1,GeneID:1013409;Name=NP_687632.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687632.1;transl_table=11
NC_004116.1	RefSeq	gene	598200	598400	.	+	.	ID=gene697;Dbxref=GeneID:1013410;Name=SAG0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0606
NC_004116.1	RefSeq	CDS	598200	598400	.	+	0	ID=cds597;Parent=gene697;Dbxref=Genbank:NP_687633.1,GeneID:1013410;Name=NP_687633.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687633.1;transl_table=11
NC_004116.1	RefSeq	gene	598441	598611	.	-	.	ID=gene698;Dbxref=GeneID:1013411;Name=SAG0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0607
NC_004116.1	RefSeq	CDS	598441	598611	.	-	0	ID=cds598;Parent=gene698;Dbxref=Genbank:NP_687634.1,GeneID:1013411;Name=NP_687634.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687634.1;transl_table=11
NC_004116.1	RefSeq	gene	599028	599207	.	+	.	ID=gene699;Dbxref=GeneID:1013412;Name=SAG0608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0608
NC_004116.1	RefSeq	CDS	599028	599207	.	+	0	ID=cds599;Parent=gene699;Dbxref=Genbank:NP_687635.1,GeneID:1013412;Name=NP_687635.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687635.1;transl_table=11
NC_004116.1	RefSeq	gene	599307	600190	.	-	.	ID=gene700;Dbxref=GeneID:1013413;Name=SAG0609;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:2444081%3B identified by sequence similarity%3B prophage LambdaSa1%2C integrase%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0609
NC_004116.1	RefSeq	gene	600190	600594	.	+	.	ID=gene701;Dbxref=GeneID:1013414;Name=SAG0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0610
NC_004116.1	RefSeq	CDS	600190	600594	.	+	0	ID=cds600;Parent=gene701;Dbxref=Genbank:NP_687636.1,GeneID:1013414;Name=NP_687636.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687636.1;transl_table=11
NC_004116.1	RefSeq	gene	600756	601573	.	+	.	ID=gene702;Dbxref=GeneID:1013415;Name=SAG0611;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to PID:807610%3B identified by sequence similarity%3B transposase%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0611
NC_004116.1	RefSeq	gene	601746	601907	.	-	.	ID=gene703;Dbxref=GeneID:1013416;Name=SAG0612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0612
NC_004116.1	RefSeq	CDS	601746	601907	.	-	0	ID=cds601;Parent=gene703;Dbxref=Genbank:NP_687637.1,GeneID:1013416;Name=NP_687637.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687637.1;transl_table=11
NC_004116.1	RefSeq	gene	602649	603926	.	+	.	ID=gene704;Dbxref=GeneID:1013417;Name=vex1;gbkey=Gene;gene=vex1;gene_biotype=protein_coding;locus_tag=SAG0613
NC_004116.1	RefSeq	CDS	602649	603926	.	+	0	ID=cds602;Parent=gene704;Dbxref=Genbank:NP_687638.1,GeneID:1013417;Name=NP_687638.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;gene=vex1;product=transmembrane protein Vexp1;protein_id=NP_687638.1;transl_table=11
NC_004116.1	RefSeq	gene	603936	604592	.	+	.	ID=gene705;Dbxref=GeneID:1013418;Name=vex2;gbkey=Gene;gene=vex2;gene_biotype=protein_coding;locus_tag=SAG0614
NC_004116.1	RefSeq	CDS	603936	604592	.	+	0	ID=cds603;Parent=gene705;Dbxref=Genbank:NP_687639.1,GeneID:1013418;Name=NP_687639.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=vex2;product=ABC transporter ATP-binding protein;protein_id=NP_687639.1;transl_table=11
NC_004116.1	RefSeq	gene	604592	605968	.	+	.	ID=gene706;Dbxref=GeneID:1013419;Name=vex3;gbkey=Gene;gene=vex3;gene_biotype=protein_coding;locus_tag=SAG0615
NC_004116.1	RefSeq	CDS	604592	605968	.	+	0	ID=cds604;Parent=gene706;Dbxref=Genbank:NP_687640.1,GeneID:1013419;Name=NP_687640.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;gene=vex3;product=transmembrane protein Vexp3;protein_id=NP_687640.1;transl_table=11
NC_004116.1	RefSeq	gene	606065	606718	.	+	.	ID=gene707;Dbxref=GeneID:1013420;Name=vncR;gbkey=Gene;gene=vncR;gene_biotype=protein_coding;locus_tag=SAG0616
NC_004116.1	RefSeq	CDS	606065	606718	.	+	0	ID=cds605;Parent=gene707;Dbxref=Genbank:NP_687641.1,GeneID:1013420;Name=NP_687641.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;gene=vncR;product=DNA-binding response regulator VncR;protein_id=NP_687641.1;transl_table=11
NC_004116.1	RefSeq	gene	606715	608034	.	+	.	ID=gene708;Dbxref=GeneID:1013421;Name=vncS;gbkey=Gene;gene=vncS;gene_biotype=protein_coding;locus_tag=SAG0617
NC_004116.1	RefSeq	CDS	606715	608034	.	+	0	ID=cds606;Parent=gene708;Dbxref=Genbank:NP_687642.1,GeneID:1013421;Name=NP_687642.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;gene=vncS;product=sensor histidine kinase VncS;protein_id=NP_687642.1;transl_table=11
NC_004116.1	RefSeq	gene	608086	608673	.	-	.	ID=gene709;Dbxref=GeneID:1013422;Name=SAG0618;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00665%3B transposase OrfB%2C IS3 family%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0618
NC_004116.1	RefSeq	gene	608911	609111	.	+	.	ID=gene710;Dbxref=GeneID:1013423;Name=SAG0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0619
NC_004116.1	RefSeq	CDS	608911	609111	.	+	0	ID=cds607;Parent=gene710;Dbxref=Genbank:NP_687643.1,GeneID:1013423;Name=NP_687643.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687643.1;transl_table=11
NC_004116.1	RefSeq	gene	609153	609341	.	+	.	ID=gene711;Dbxref=GeneID:1013424;Name=SAG0620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0620
NC_004116.1	RefSeq	CDS	609153	609341	.	+	0	ID=cds608;Parent=gene711;Dbxref=Genbank:NP_687644.1,GeneID:1013424;Name=NP_687644.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687644.1;transl_table=11
NC_004116.1	RefSeq	gene	609766	610971	.	+	.	ID=gene712;Dbxref=GeneID:1013425;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=SAG0621
NC_004116.1	RefSeq	CDS	609766	610971	.	+	0	ID=cds609;Parent=gene712;Dbxref=Genbank:NP_687645.1,GeneID:1013425;Name=NP_687645.1;Note=identified by match to PFAM protein family HMM PF01098;gbkey=CDS;gene=rodA;product=rod shape-determining protein RodA;protein_id=NP_687645.1;transl_table=11
NC_004116.1	RefSeq	gene	611090	611650	.	+	.	ID=gene713;Dbxref=GeneID:1013426;Name=SAG0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0622
NC_004116.1	RefSeq	CDS	611090	611650	.	+	0	ID=cds610;Parent=gene713;Dbxref=Genbank:NP_687646.1,GeneID:1013426;Name=NP_687646.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687646.1;transl_table=11
NC_004116.1	RefSeq	gene	611651	613603	.	+	.	ID=gene714;Dbxref=GeneID:1013427;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SAG0623
NC_004116.1	RefSeq	CDS	611651	613603	.	+	0	ID=cds611;Parent=gene714;Dbxref=Genbank:NP_687647.1,GeneID:1013427;Name=NP_687647.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=NP_687647.1;transl_table=11
NC_004116.1	RefSeq	gene	613697	615421	.	+	.	ID=gene715;Dbxref=GeneID:1013428;Name=SAG0624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0624
NC_004116.1	RefSeq	CDS	613697	615421	.	+	0	ID=cds612;Parent=gene715;Dbxref=Genbank:NP_687648.1,GeneID:1013428;Name=NP_687648.1;Note=acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation;gbkey=CDS;product=septation ring formation regulator EzrA;protein_id=NP_687648.1;transl_table=11
NC_004116.1	RefSeq	gene	615515	616156	.	+	.	ID=gene716;Dbxref=GeneID:1013429;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SAG0625
NC_004116.1	RefSeq	CDS	615515	616156	.	+	0	ID=cds613;Parent=gene716;Dbxref=Genbank:NP_687649.1,GeneID:1013429;Name=NP_687649.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;gene=serB;product=phosphoserine phosphatase SerB;protein_id=NP_687649.1;transl_table=11
NC_004116.1	RefSeq	gene	616177	616662	.	-	.	ID=gene717;Dbxref=GeneID:1013430;Name=SAG0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0626
NC_004116.1	RefSeq	CDS	616177	616662	.	-	0	ID=cds614;Parent=gene717;Dbxref=Genbank:NP_687650.1,GeneID:1013430;Name=NP_687650.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=NP_687650.1;transl_table=11
NC_004116.1	RefSeq	gene	616675	617130	.	-	.	ID=gene718;Dbxref=GeneID:1013431;Name=SAG0627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0627
NC_004116.1	RefSeq	CDS	616675	617130	.	-	0	ID=cds615;Parent=gene718;Dbxref=Genbank:NP_687651.1,GeneID:1013431;Name=NP_687651.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687651.1;transl_table=11
NC_004116.1	RefSeq	gene	617328	618635	.	+	.	ID=gene719;Dbxref=GeneID:1013432;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SAG0628
NC_004116.1	RefSeq	CDS	617328	618635	.	+	0	ID=cds616;Parent=gene719;Dbxref=Genbank:NP_687652.1,GeneID:1013432;Name=NP_687652.1;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=NP_687652.1;transl_table=11
NC_004116.1	RefSeq	gene	618743	619807	.	-	.	ID=gene720;Dbxref=GeneID:1013433;Name=SAG0629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0629
NC_004116.1	RefSeq	CDS	618743	619807	.	-	0	ID=cds617;Parent=gene720;Dbxref=Genbank:NP_687653.1,GeneID:1013433;Name=NP_687653.1;Note=similar to OMNI:NTL01SPL0534%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687653.1;transl_table=11
NC_004116.1	RefSeq	gene	620036	621319	.	+	.	ID=gene721;Dbxref=GeneID:1013434;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=SAG0630
NC_004116.1	RefSeq	CDS	620036	621319	.	+	0	ID=cds618;Parent=gene721;Dbxref=Genbank:NP_687654.1,GeneID:1013434;Name=NP_687654.1;Note=catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=NP_687654.1;transl_table=11
NC_004116.1	RefSeq	gene	621312	621824	.	+	.	ID=gene722;Dbxref=GeneID:1013435;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SAG0631
NC_004116.1	RefSeq	CDS	621312	621824	.	+	0	ID=cds619;Parent=gene722;Dbxref=Genbank:NP_687655.1,GeneID:1013435;Name=NP_687655.1;Note=catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=NP_687655.1;transl_table=11
NC_004116.1	RefSeq	gene	621881	623254	.	+	.	ID=gene723;Dbxref=GeneID:1013436;Name=SAG0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0632
NC_004116.1	RefSeq	CDS	621881	623254	.	+	0	ID=cds620;Parent=gene723;Dbxref=Genbank:NP_687656.1,GeneID:1013436;Name=NP_687656.1;Note=identified by match to TIGR protein family HMM TIGR00350;gbkey=CDS;product=psr protein;protein_id=NP_687656.1;transl_table=11
NC_004116.1	RefSeq	gene	623355	624710	.	+	.	ID=gene724;Dbxref=GeneID:1013437;Name=SAG0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0633
NC_004116.1	RefSeq	CDS	623355	624710	.	+	0	ID=cds621;Parent=gene724;Dbxref=Genbank:NP_687657.1,GeneID:1013437;Name=NP_687657.1;Note=identified by match to PFAM protein family HMM PF01938;gbkey=CDS;product=RNA methyltransferase;protein_id=NP_687657.1;transl_table=11
NC_004116.1	RefSeq	gene	624827	625039	.	+	.	ID=gene725;Dbxref=GeneID:1013438;Name=SAG0634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0634
NC_004116.1	RefSeq	CDS	624827	625039	.	+	0	ID=cds622;Parent=gene725;Dbxref=Genbank:NP_687658.1,GeneID:1013438;Name=NP_687658.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687658.1;transl_table=11
NC_004116.1	RefSeq	gene	625157	625894	.	+	.	ID=gene726;Dbxref=GeneID:1013439;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=SAG0635
NC_004116.1	RefSeq	CDS	625157	625894	.	+	0	ID=cds623;Parent=gene726;Dbxref=Genbank:NP_687659.1,GeneID:1013439;Name=NP_687659.1;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity;gbkey=CDS;gene=aphA;product=acid phosphatase/phosphotransferase;protein_id=NP_687659.1;transl_table=11
NC_004116.1	RefSeq	gene	626215	626733	.	+	.	ID=gene727;Dbxref=GeneID:1013440;Name=SAG0636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0636
NC_004116.1	RefSeq	CDS	626215	626733	.	+	0	ID=cds624;Parent=gene727;Dbxref=Genbank:NP_687660.1,GeneID:1013440;Name=NP_687660.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687660.1;transl_table=11
NC_004116.1	RefSeq	gene	626862	627387	.	-	.	ID=gene728;Dbxref=GeneID:1013441;Name=SAG0637;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:NTL01SPL0992%3B identified by sequence similarity%3B transcriptional regulator%2C TetR family%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG0637
NC_004116.1	RefSeq	gene	627570	627899	.	+	.	ID=gene729;Dbxref=GeneID:1013442;Name=SAG0638;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to TIGR protein family HMM TIGR01168%3B cell wall surface anchor family protein%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0638
NC_004116.1	RefSeq	gene	628019	628840	.	-	.	ID=gene730;Dbxref=GeneID:1013443;Name=SAG0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0639
NC_004116.1	RefSeq	CDS	628019	628840	.	-	0	ID=cds625;Parent=gene730;Dbxref=Genbank:NP_687661.1,GeneID:1013443;Name=NP_687661.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=IS5 family transposase orfB;protein_id=NP_687661.1;transl_table=11
NC_004116.1	RefSeq	gene	628888	629163	.	-	.	ID=gene731;Dbxref=GeneID:1013444;Name=SAG0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0640
NC_004116.1	RefSeq	CDS	628888	629163	.	-	0	ID=cds626;Parent=gene731;Dbxref=Genbank:NP_687662.1,GeneID:1013444;Name=NP_687662.1;Note=identified by match to PFAM protein family HMM PF01527;gbkey=CDS;product=IS3 family transposase OrfA;protein_id=NP_687662.1;transl_table=11
NC_004116.1	RefSeq	gene	629245	629433	.	+	.	ID=gene732;Dbxref=GeneID:1013445;Name=SAG0641;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP1054%3B identified by sequence similarity%3B Tn5252%2C Orf 10 protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0641
NC_004116.1	RefSeq	gene	629519	629698	.	+	.	ID=gene733;Dbxref=GeneID:1013446;Name=SAG0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0642
NC_004116.1	RefSeq	CDS	629519	629698	.	+	0	ID=cds627;Parent=gene733;Dbxref=Genbank:NP_687663.1,GeneID:1013446;Name=NP_687663.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687663.1;transl_table=11
NC_004116.1	RefSeq	gene	629695	630167	.	-	.	ID=gene734;Dbxref=GeneID:1013447;Name=SAG0643;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP2188%3B identified by sequence similarity%3B chaperonin%2C 33 kDa%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0643
NC_004116.1	RefSeq	gene	630361	631569	.	-	.	ID=gene735;Dbxref=GeneID:1013448;Name=SAG0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0644
NC_004116.1	RefSeq	CDS	630361	631569	.	-	0	ID=cds628;Parent=gene735;Dbxref=Genbank:NP_687664.1,GeneID:1013448;Name=NP_687664.1;Note=identified by match to PFAM protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=NP_687664.1;transl_table=11
NC_004116.1	RefSeq	gene	631950	633614	.	+	.	ID=gene736;Dbxref=GeneID:1013449;Name=SAG0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0645
NC_004116.1	RefSeq	CDS	631950	633614	.	+	0	ID=cds629;Parent=gene736;Dbxref=Genbank:NP_687665.1,GeneID:1013449;Name=NP_687665.1;Note=identified by match to PFAM protein family HMM PF00746%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_687665.1;transl_table=11
NC_004116.1	RefSeq	gene	633703	634626	.	+	.	ID=gene737;Dbxref=GeneID:1013450;Name=SAG0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0646
NC_004116.1	RefSeq	CDS	633703	634626	.	+	0	ID=cds630;Parent=gene737;Dbxref=Genbank:NP_687666.1,GeneID:1013450;Name=NP_687666.1;Note=identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_687666.1;transl_table=11
NC_004116.1	RefSeq	gene	634628	635545	.	+	.	ID=gene738;Dbxref=GeneID:1013451;Name=SAG0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0647
NC_004116.1	RefSeq	CDS	634628	635545	.	+	0	ID=cds631;Parent=gene738;Dbxref=Genbank:NP_687667.1,GeneID:1013451;Name=NP_687667.1;Note=identified by match to TIGR protein family HMM TIGR01076;gbkey=CDS;product=sortase family protein;protein_id=NP_687667.1;transl_table=11
NC_004116.1	RefSeq	gene	635571	636353	.	+	.	ID=gene739;Dbxref=GeneID:1013452;Name=SAG0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0648
NC_004116.1	RefSeq	CDS	635571	636353	.	+	0	ID=cds632;Parent=gene739;Dbxref=Genbank:NP_687668.1,GeneID:1013452;Name=NP_687668.1;Note=identified by match to TIGR protein family HMM TIGR01076;gbkey=CDS;product=sortase family protein;protein_id=NP_687668.1;transl_table=11
NC_004116.1	RefSeq	gene	636431	639103	.	+	.	ID=gene740;Dbxref=GeneID:1013453;Name=SAG0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0649
NC_004116.1	RefSeq	CDS	636431	639103	.	+	0	ID=cds633;Parent=gene740;Dbxref=Genbank:NP_687669.1,GeneID:1013453;Name=NP_687669.1;Note=similar to OMNI:SP0462%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_687669.1;transl_table=11
NC_004116.1	RefSeq	gene	639378	639947	.	+	.	ID=gene741;Dbxref=GeneID:1013454;Name=SAG0650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0650
NC_004116.1	RefSeq	CDS	639378	639947	.	+	0	ID=cds634;Parent=gene741;Dbxref=Genbank:NP_687670.1,GeneID:1013454;Name=NP_687670.1;Note=identified by match to TIGR protein family HMM TIGR01076;gbkey=CDS;product=sortase family protein;protein_id=NP_687670.1;transl_table=11
NC_004116.1	RefSeq	gene	640196	640801	.	+	.	ID=gene742;Dbxref=GeneID:1013455;Name=SAG0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0651
NC_004116.1	RefSeq	CDS	640196	640801	.	+	0	ID=cds635;Parent=gene742;Dbxref=Genbank:NP_687671.1,GeneID:1013455;Name=NP_687671.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687671.1;transl_table=11
NC_004116.1	RefSeq	gene	641039	641414	.	+	.	ID=gene743;Dbxref=GeneID:1013456;Name=SAG0652;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:11559696%3B identified by sequence similarity%3B Tn5252%2C Orf 28 protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0652
NC_004116.1	RefSeq	gene	641845	642075	.	+	.	ID=gene744;Dbxref=GeneID:1013457;Name=SAG0653;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0653
NC_004116.1	RefSeq	gene	642197	642301	.	+	.	ID=gene745;Dbxref=GeneID:1013458;Name=SAG0654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0654
NC_004116.1	RefSeq	CDS	642197	642301	.	+	0	ID=cds636;Parent=gene745;Dbxref=Genbank:NP_687672.1,GeneID:1013458;Name=NP_687672.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687672.1;transl_table=11
NC_004116.1	RefSeq	gene	642734	642907	.	+	.	ID=gene746;Dbxref=GeneID:1013459;Name=SAG0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0655
NC_004116.1	RefSeq	CDS	642734	642907	.	+	0	ID=cds637;Parent=gene746;Dbxref=Genbank:NP_687673.1,GeneID:1013459;Name=NP_687673.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687673.1;transl_table=11
NC_004116.1	RefSeq	gene	643279	643389	.	-	.	ID=gene747;Dbxref=GeneID:1013460;Name=SAG0656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0656
NC_004116.1	RefSeq	CDS	643279	643389	.	-	0	ID=cds638;Parent=gene747;Dbxref=Genbank:NP_687674.1,GeneID:1013460;Name=NP_687674.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687674.1;transl_table=11
NC_004116.1	RefSeq	gene	643420	643689	.	+	.	ID=gene748;Dbxref=GeneID:1013461;Name=SAG0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0657
NC_004116.1	RefSeq	CDS	643420	643689	.	+	0	ID=cds639;Parent=gene748;Dbxref=Genbank:NP_687675.1,GeneID:1013461;Name=NP_687675.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687675.1;transl_table=11
NC_004116.1	RefSeq	gene	643750	644901	.	+	.	ID=gene749;Dbxref=GeneID:1013462;Name=SAG0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0658
NC_004116.1	RefSeq	CDS	643750	644901	.	+	0	ID=cds640;Parent=gene749;Dbxref=Genbank:NP_687676.1,GeneID:1013462;Name=NP_687676.1;Note=similar to OMNI:EF0746%3B identified by sequence similarity;gbkey=CDS;product=lipoprotein;protein_id=NP_687676.1;transl_table=11
NC_004116.1	RefSeq	gene	645101	646093	.	+	.	ID=gene750;Dbxref=GeneID:1013463;Name=SAG0659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0659
NC_004116.1	RefSeq	CDS	645101	646093	.	+	0	ID=cds641;Parent=gene750;Dbxref=Genbank:NP_687677.1,GeneID:1013463;Name=NP_687677.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687677.1;transl_table=11
NC_004116.1	RefSeq	gene	646096	646914	.	+	.	ID=gene751;Dbxref=GeneID:1013464;Name=SAG0660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0660
NC_004116.1	RefSeq	CDS	646096	646914	.	+	0	ID=cds642;Parent=gene751;Dbxref=Genbank:NP_687678.1,GeneID:1013464;Name=NP_687678.1;Note=similar to OMNI:SP0637%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687678.1;transl_table=11
NC_004116.1	RefSeq	gene	646916	647701	.	+	.	ID=gene752;Dbxref=GeneID:1013465;Name=SAG0661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0661
NC_004116.1	RefSeq	CDS	646916	647701	.	+	0	ID=cds643;Parent=gene752;Dbxref=Genbank:NP_687679.1,GeneID:1013465;Name=NP_687679.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687679.1;transl_table=11
NC_004116.1	RefSeq	gene	648326	648631	.	+	.	ID=gene753;Dbxref=GeneID:1013466;Name=SAG0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0662
NC_004116.1	RefSeq	CDS	648326	648631	.	+	0	ID=cds644;Parent=gene753;Dbxref=Genbank:NP_687680.1,GeneID:1013466;Name=NP_687680.1;Note=similar to GP:4886770%3B identified by sequence similarity;gbkey=CDS;product=cylX protein;protein_id=NP_687680.1;transl_table=11
NC_004116.1	RefSeq	gene	648631	649479	.	+	.	ID=gene754;Dbxref=GeneID:1013467;Name=cylD;gbkey=Gene;gene=cylD;gene_biotype=protein_coding;locus_tag=SAG0663
NC_004116.1	RefSeq	CDS	648631	649479	.	+	0	ID=cds645;Parent=gene754;Dbxref=Genbank:NP_687681.1,GeneID:1013467;Name=NP_687681.1;gbkey=CDS;gene=cylD;product=cylD protein;protein_id=NP_687681.1;transl_table=11
NC_004116.1	RefSeq	gene	649476	650198	.	+	.	ID=gene755;Dbxref=GeneID:1013468;Name=cylG;gbkey=Gene;gene=cylG;gene_biotype=protein_coding;locus_tag=SAG0664
NC_004116.1	RefSeq	CDS	649476	650198	.	+	0	ID=cds646;Parent=gene755;Dbxref=Genbank:NP_687682.1,GeneID:1013468;Name=NP_687682.1;Note=identified by match to PFAM protein family HMM PF00106;gbkey=CDS;gene=cylG;product=cylG protein;protein_id=NP_687682.1;transl_table=11
NC_004116.1	RefSeq	gene	650191	650496	.	+	.	ID=gene756;Dbxref=GeneID:1013469;Name=SAG0665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0665
NC_004116.1	RefSeq	CDS	650191	650496	.	+	0	ID=cds647;Parent=gene756;Dbxref=Genbank:NP_687683.1,GeneID:1013469;Name=NP_687683.1;gbkey=CDS;product=acyl carrier protein;protein_id=NP_687683.1;transl_table=11
NC_004116.1	RefSeq	gene	650480	650956	.	+	.	ID=gene757;Dbxref=GeneID:1013470;Name=SAG0666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0666
NC_004116.1	RefSeq	CDS	650480	650956	.	+	0	ID=cds648;Parent=gene757;Dbxref=Genbank:NP_687684.1,GeneID:1013470;Name=NP_687684.1;Note=identified by match to PFAM protein family HMM PF01377;gbkey=CDS;product=cylZ protein;protein_id=NP_687684.1;transl_table=11
NC_004116.1	RefSeq	gene	650946	651875	.	+	.	ID=gene758;Dbxref=GeneID:1013471;Name=cylA;gbkey=Gene;gene=cylA;gene_biotype=protein_coding;locus_tag=SAG0667
NC_004116.1	RefSeq	CDS	650946	651875	.	+	0	ID=cds649;Parent=gene758;Dbxref=Genbank:NP_687685.1,GeneID:1013471;Name=NP_687685.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=cylA;product=cylA protein;protein_id=NP_687685.1;transl_table=11
NC_004116.1	RefSeq	gene	651868	652746	.	+	.	ID=gene759;Dbxref=GeneID:1013472;Name=cylB;gbkey=Gene;gene=cylB;gene_biotype=protein_coding;locus_tag=SAG0668
NC_004116.1	RefSeq	CDS	651868	652746	.	+	0	ID=cds650;Parent=gene759;Dbxref=Genbank:NP_687686.1,GeneID:1013472;Name=NP_687686.1;gbkey=CDS;gene=cylB;product=cylB protein;protein_id=NP_687686.1;transl_table=11
NC_004116.1	RefSeq	gene	652743	654746	.	+	.	ID=gene760;Dbxref=GeneID:1013473;Name=cylE;gbkey=Gene;gene=cylE;gene_biotype=protein_coding;locus_tag=SAG0669
NC_004116.1	RefSeq	CDS	652743	654746	.	+	0	ID=cds651;Parent=gene760;Dbxref=Genbank:NP_687687.1,GeneID:1013473;Name=NP_687687.1;Note=similar to GP:4886777%3B identified by sequence similarity;gbkey=CDS;gene=cylE;product=cylE protein;protein_id=NP_687687.1;transl_table=11
NC_004116.1	RefSeq	gene	654743	655696	.	+	.	ID=gene761;Dbxref=GeneID:1013474;Name=cylF;gbkey=Gene;gene=cylF;gene_biotype=protein_coding;locus_tag=SAG0670
NC_004116.1	RefSeq	CDS	654743	655696	.	+	0	ID=cds652;Parent=gene761;Dbxref=Genbank:NP_687688.1,GeneID:1013474;Name=NP_687688.1;Note=identified by match to PFAM protein family HMM PF01571;gbkey=CDS;gene=cylF;product=cylF protein;protein_id=NP_687688.1;transl_table=11
NC_004116.1	RefSeq	gene	655693	657888	.	+	.	ID=gene762;Dbxref=GeneID:1013475;Name=cylI;gbkey=Gene;gene=cylI;gene_biotype=protein_coding;locus_tag=SAG0671
NC_004116.1	RefSeq	CDS	655693	657888	.	+	0	ID=cds653;Parent=gene762;Dbxref=Genbank:NP_687689.1,GeneID:1013475;Name=NP_687689.1;Note=identified by match to PFAM protein family HMM PF00109;gbkey=CDS;gene=cylI;product=cylI protein;protein_id=NP_687689.1;transl_table=11
NC_004116.1	RefSeq	gene	657893	659104	.	+	.	ID=gene763;Dbxref=GeneID:1013476;Name=cylJ;gbkey=Gene;gene=cylJ;gene_biotype=protein_coding;locus_tag=SAG0672
NC_004116.1	RefSeq	CDS	657893	659104	.	+	0	ID=cds654;Parent=gene763;Dbxref=Genbank:NP_687690.1,GeneID:1013476;Name=NP_687690.1;Note=similar to GP:6007854%3B identified by sequence similarity;gbkey=CDS;gene=cylJ;product=cylJ protein;protein_id=NP_687690.1;transl_table=11
NC_004116.1	RefSeq	gene	659073	659648	.	+	.	ID=gene764;Dbxref=GeneID:1013477;Name=cylK;gbkey=Gene;gene=cylK;gene_biotype=protein_coding;locus_tag=SAG0673
NC_004116.1	RefSeq	CDS	659073	659648	.	+	0	ID=cds655;Parent=gene764;Dbxref=Genbank:NP_687691.1,GeneID:1013477;Name=NP_687691.1;Note=similar to GP:6007855%3B identified by sequence similarity;gbkey=CDS;gene=cylK;product=cylK protein;protein_id=NP_687691.1;transl_table=11
NC_004116.1	RefSeq	gene	659991	660332	.	+	.	ID=gene765;Dbxref=GeneID:1013478;Name=SAG0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0674
NC_004116.1	RefSeq	CDS	659991	660332	.	+	0	ID=cds656;Parent=gene765;Dbxref=Genbank:NP_687692.1,GeneID:1013478;Name=NP_687692.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687692.1;transl_table=11
NC_004116.1	RefSeq	gene	660366	660881	.	+	.	ID=gene766;Dbxref=GeneID:1013479;Name=SAG0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0675
NC_004116.1	RefSeq	CDS	660366	660881	.	+	0	ID=cds657;Parent=gene766;Dbxref=Genbank:NP_687693.1,GeneID:1013479;Name=NP_687693.1;Note=similar to SP:P16952%3B identified by sequence similarity;gbkey=CDS;product=secreted protein;protein_id=NP_687693.1;transl_table=11
NC_004116.1	RefSeq	gene	660933	663590	.	+	.	ID=gene767;Dbxref=GeneID:1013480;Name=SAG0676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0676
NC_004116.1	RefSeq	CDS	660933	663590	.	+	0	ID=cds658;Parent=gene767;Dbxref=Genbank:NP_687694.1,GeneID:1013480;Name=NP_687694.1;Note=identified by match to PFAM protein family HMM PF00082;gbkey=CDS;product=proteinase;protein_id=NP_687694.1;transl_table=11
NC_004116.1	RefSeq	gene	663693	666881	.	+	.	ID=gene768;Dbxref=GeneID:1013481;Name=SAG0677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0677
NC_004116.1	RefSeq	CDS	663693	666881	.	+	0	ID=cds659;Parent=gene768;Dbxref=Genbank:NP_687695.1,GeneID:1013481;Name=NP_687695.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687695.1;transl_table=11
NC_004116.1	RefSeq	gene	667065	669096	.	+	.	ID=gene769;Dbxref=GeneID:1013482;Name=SAG0678;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:5139244%3B identified by sequence similarity%3B endopeptidase O%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0678
NC_004116.1	RefSeq	gene	669128	670159	.	+	.	ID=gene770;Dbxref=GeneID:1013483;Name=SAG0679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0679
NC_004116.1	RefSeq	CDS	669128	670159	.	+	0	ID=cds660;Parent=gene770;Dbxref=Genbank:NP_687696.1,GeneID:1013483;Name=NP_687696.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687696.1;transl_table=11
NC_004116.1	RefSeq	gene	670194	671213	.	+	.	ID=gene771;Dbxref=GeneID:1013484;Name=SAG0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0680
NC_004116.1	RefSeq	CDS	670194	671213	.	+	0	ID=cds661;Parent=gene771;Dbxref=Genbank:NP_687697.1,GeneID:1013484;Name=NP_687697.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687697.1;transl_table=11
NC_004116.1	RefSeq	gene	671248	672309	.	+	.	ID=gene772;Dbxref=GeneID:1013485;Name=SAG0681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0681
NC_004116.1	RefSeq	CDS	671248	672309	.	+	0	ID=cds662;Parent=gene772;Dbxref=Genbank:NP_687698.1,GeneID:1013485;Name=NP_687698.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687698.1;transl_table=11
NC_004116.1	RefSeq	gene	672433	673662	.	+	.	ID=gene773;Dbxref=GeneID:1013486;Name=SAG0682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0682
NC_004116.1	RefSeq	CDS	672433	673662	.	+	0	ID=cds663;Parent=gene773;Dbxref=Genbank:NP_687699.1,GeneID:1013486;Name=NP_687699.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;product=permease;protein_id=NP_687699.1;transl_table=11
NC_004116.1	RefSeq	gene	673672	675024	.	+	.	ID=gene774;Dbxref=GeneID:1013487;Name=SAG0683;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP0601%3B identified by sequence similarity%3B transmembrane protein Vexp3%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG0683
NC_004116.1	RefSeq	gene	675121	675792	.	+	.	ID=gene775;Dbxref=GeneID:1013488;Name=SAG0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0684
NC_004116.1	RefSeq	CDS	675121	675792	.	+	0	ID=cds664;Parent=gene775;Dbxref=Genbank:NP_687700.1,GeneID:1013488;Name=NP_687700.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687700.1;transl_table=11
NC_004116.1	RefSeq	gene	675849	677267	.	-	.	ID=gene776;Dbxref=GeneID:1013489;Name=SAG0685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0685
NC_004116.1	RefSeq	CDS	675849	677267	.	-	0	ID=cds665;Parent=gene776;Dbxref=Genbank:NP_687701.1,GeneID:1013489;Name=NP_687701.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687701.1;transl_table=11
NC_004116.1	RefSeq	gene	677555	678340	.	+	.	ID=gene777;Dbxref=GeneID:1013490;Name=SAG0686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0686
NC_004116.1	RefSeq	CDS	677555	678340	.	+	0	ID=cds666;Parent=gene777;Dbxref=Genbank:NP_687702.1,GeneID:1013490;Name=NP_687702.1;Note=similar to SP:Q03158 GB:X54225 PID:47374%3B identified by sequence similarity;gbkey=CDS;product=DNA-entry nuclease;protein_id=NP_687702.1;transl_table=11
NC_004116.1	RefSeq	gene	678418	679056	.	-	.	ID=gene778;Dbxref=GeneID:1013491;Name=SAG0687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0687
NC_004116.1	RefSeq	CDS	678418	679056	.	-	0	ID=cds667;Parent=gene778;Dbxref=Genbank:NP_687703.1,GeneID:1013491;Name=NP_687703.1;Note=identified by match to PFAM protein family HMM PF00597;gbkey=CDS;product=DedA family protein;protein_id=NP_687703.1;transl_table=11
NC_004116.1	RefSeq	gene	679273	679929	.	+	.	ID=gene779;Dbxref=GeneID:1013492;Name=SAG0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0688
NC_004116.1	RefSeq	CDS	679273	679929	.	+	0	ID=cds668;Parent=gene779;Dbxref=Genbank:NP_687704.1,GeneID:1013492;Name=NP_687704.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687704.1;transl_table=11
NC_004116.1	RefSeq	gene	679926	680699	.	+	.	ID=gene780;Dbxref=GeneID:1013493;Name=SAG0689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0689
NC_004116.1	RefSeq	CDS	679926	680699	.	+	0	ID=cds669;Parent=gene780;Dbxref=Genbank:NP_687705.1,GeneID:1013493;Name=NP_687705.1;Note=identified by match to TIGR protein family HMM TIGR00245;gbkey=CDS;product=hypothetical protein;protein_id=NP_687705.1;transl_table=11
NC_004116.1	RefSeq	gene	680863	681681	.	+	.	ID=gene781;Dbxref=GeneID:1013494;Name=SAG0690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0690
NC_004116.1	RefSeq	CDS	680863	681681	.	+	0	ID=cds670;Parent=gene781;Dbxref=Genbank:NP_687706.1,GeneID:1013494;Name=NP_687706.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687706.1;transl_table=11
NC_004116.1	RefSeq	gene	681718	682602	.	-	.	ID=gene782;Dbxref=GeneID:1013495;Name=SAG0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0691
NC_004116.1	RefSeq	CDS	681718	682602	.	-	0	ID=cds671;Parent=gene782;Dbxref=Genbank:NP_687707.1,GeneID:1013495;Name=NP_687707.1;Note=identified by match to PFAM protein family HMM PF00126;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=NP_687707.1;transl_table=11
NC_004116.1	RefSeq	gene	682795	683376	.	+	.	ID=gene783;Dbxref=GeneID:1013496;Name=SAG0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0692
NC_004116.1	RefSeq	CDS	682795	683376	.	+	0	ID=cds672;Parent=gene783;Dbxref=Genbank:NP_687708.1,GeneID:1013496;Name=NP_687708.1;Note=similar to GP:5901699%3B identified by sequence similarity;gbkey=CDS;product=regulatory protein;protein_id=NP_687708.1;transl_table=11
NC_004116.1	RefSeq	gene	683390	684523	.	-	.	ID=gene784;Dbxref=GeneID:1013497;Name=SAG0693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0693
NC_004116.1	RefSeq	CDS	683390	684523	.	-	0	ID=cds673;Parent=gene784;Dbxref=Genbank:NP_687709.1,GeneID:1013497;Name=NP_687709.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1548 transposase;protein_id=NP_687709.1;transl_table=11
NC_004116.1	RefSeq	gene	684657	685178	.	+	.	ID=gene785;Dbxref=GeneID:1013498;Name=SAG0694;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to PID:1354775 GB:AE000520%3B identified by sequence similarity%3B regulatory protein%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG0694
NC_004116.1	RefSeq	gene	685192	686184	.	+	.	ID=gene786;Dbxref=GeneID:1013499;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=SAG0695
NC_004116.1	RefSeq	CDS	685192	686184	.	+	0	ID=cds674;Parent=gene786;Dbxref=Genbank:NP_687710.1,GeneID:1013499;Name=NP_687710.1;Note=catalyzes the formation of pyruvate from lactate;gbkey=CDS;gene=ldhA;product=D-lactate dehydrogenase;protein_id=NP_687710.1;transl_table=11
NC_004116.1	RefSeq	gene	686391	687941	.	+	.	ID=gene787;Dbxref=GeneID:1013500;Name=SAG0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0696
NC_004116.1	RefSeq	CDS	686391	687941	.	+	0	ID=cds675;Parent=gene787;Dbxref=Genbank:NP_687711.1,GeneID:1013500;Name=NP_687711.1;gbkey=CDS;product=sugar transporter;protein_id=NP_687711.1;transl_table=11
NC_004116.1	RefSeq	gene	688008	689033	.	+	.	ID=gene788;Dbxref=GeneID:1013501;Name=SAG0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0697
NC_004116.1	RefSeq	CDS	688008	689033	.	+	0	ID=cds676;Parent=gene788;Dbxref=Genbank:NP_687712.1,GeneID:1013501;Name=NP_687712.1;Note=identified by match to PFAM protein family HMM PF00294;gbkey=CDS;product=2-keto-3-deoxygluconate kinase;protein_id=NP_687712.1;transl_table=11
NC_004116.1	RefSeq	gene	689050	690849	.	+	.	ID=gene789;Dbxref=GeneID:1013502;Name=SAG0698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0698
NC_004116.1	RefSeq	CDS	689050	690849	.	+	0	ID=cds677;Parent=gene789;Dbxref=Genbank:NP_687713.1,GeneID:1013502;Name=NP_687713.1;Note=identified by match to PFAM protein family HMM PF00703;gbkey=CDS;product=beta-D-glucuronidase;protein_id=NP_687713.1;transl_table=11
NC_004116.1	RefSeq	gene	690878	691549	.	+	.	ID=gene790;Dbxref=GeneID:1013503;Name=SAG0699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0699
NC_004116.1	RefSeq	CDS	690878	691549	.	+	0	ID=cds678;Parent=gene790;Dbxref=Genbank:NP_687714.1,GeneID:1013503;Name=NP_687714.1;Note=identified by match to PFAM protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_687714.1;transl_table=11
NC_004116.1	RefSeq	gene	691666	692283	.	+	.	ID=gene791;Dbxref=GeneID:1013504;Name=eda-1;gbkey=Gene;gene=eda-1;gene_biotype=protein_coding;locus_tag=SAG0700
NC_004116.1	RefSeq	CDS	691666	692283	.	+	0	ID=cds679;Parent=gene791;Dbxref=Genbank:NP_687715.1,GeneID:1013504;Name=NP_687715.1;Note=identified by match to PFAM protein family HMM PF01081;gbkey=CDS;gene=eda-1;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=NP_687715.1;transl_table=11
NC_004116.1	RefSeq	gene	692300	693700	.	+	.	ID=gene792;Dbxref=GeneID:1013505;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=SAG0701
NC_004116.1	RefSeq	CDS	692300	693700	.	+	0	ID=cds680;Parent=gene792;Dbxref=Genbank:NP_687716.1,GeneID:1013505;Name=NP_687716.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;gene=uxaC;product=glucuronate isomerase;protein_id=NP_687716.1;transl_table=11
NC_004116.1	RefSeq	gene	693718	694764	.	+	.	ID=gene793;Dbxref=GeneID:1013506;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=SAG0702
NC_004116.1	RefSeq	CDS	693718	694764	.	+	0	ID=cds681;Parent=gene793;Dbxref=Genbank:NP_687717.1,GeneID:1013506;Name=NP_687717.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;gene=uxuA;product=mannonate dehydratase;protein_id=NP_687717.1;transl_table=11
NC_004116.1	RefSeq	gene	694888	695727	.	+	.	ID=gene794;Dbxref=GeneID:1013507;Name=SAG0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0703
NC_004116.1	RefSeq	CDS	694888	695727	.	+	0	ID=cds682;Parent=gene794;Dbxref=Genbank:NP_687718.1,GeneID:1013507;Name=NP_687718.1;Note=Converts D-mannonate to D-mannuronate;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=NP_687718.1;transl_table=11
NC_004116.1	RefSeq	gene	695880	696692	.	+	.	ID=gene795;Dbxref=GeneID:1013508;Name=SAG0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0704
NC_004116.1	RefSeq	CDS	695880	696692	.	+	0	ID=cds683;Parent=gene795;Dbxref=Genbank:NP_687719.1,GeneID:1013508;Name=NP_687719.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687719.1;transl_table=11
NC_004116.1	RefSeq	gene	696708	698498	.	+	.	ID=gene796;Dbxref=GeneID:1013509;Name=SAG0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0705
NC_004116.1	RefSeq	CDS	696708	698498	.	+	0	ID=cds684;Parent=gene796;Dbxref=Genbank:NP_687720.1,GeneID:1013509;Name=NP_687720.1;Note=identified by match to PFAM protein family HMM PF00933;gbkey=CDS;product=glycosyl hydrolase family protein;protein_id=NP_687720.1;transl_table=11
NC_004116.1	RefSeq	gene	698556	699641	.	-	.	ID=gene797;Dbxref=GeneID:1013510;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=SAG0706
NC_004116.1	RefSeq	CDS	698556	699641	.	-	0	ID=cds685;Parent=gene797;Dbxref=Genbank:NP_687721.1,GeneID:1013510;Name=NP_687721.1;Note=identified by match to PFAM protein family HMM PF00557;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=NP_687721.1;transl_table=11
NC_004116.1	RefSeq	gene	699851	700855	.	+	.	ID=gene798;Dbxref=GeneID:1013511;Name=SAG0707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0707
NC_004116.1	RefSeq	CDS	699851	700855	.	+	0	ID=cds686;Parent=gene798;Dbxref=Genbank:NP_687722.1,GeneID:1013511;Name=NP_687722.1;Note=identified by match to PFAM protein family HMM PF00356;gbkey=CDS;product=RegM family transcriptional regulator;protein_id=NP_687722.1;transl_table=11
NC_004116.1	RefSeq	gene	700987	702453	.	+	.	ID=gene799;Dbxref=GeneID:1013512;Name=SAG0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0708
NC_004116.1	RefSeq	CDS	700987	702453	.	+	0	ID=cds687;Parent=gene799;Dbxref=Genbank:NP_687723.1,GeneID:1013512;Name=NP_687723.1;Note=converts 1%2C4-alpha-D-glucans to maltodextrin;gbkey=CDS;product=alpha-amylase;protein_id=NP_687723.1;transl_table=11
NC_004116.1	RefSeq	gene	702498	703496	.	+	.	ID=gene800;Dbxref=GeneID:1013513;Name=SAG0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0709
NC_004116.1	RefSeq	CDS	702498	703496	.	+	0	ID=cds688;Parent=gene800;Dbxref=Genbank:NP_687724.1,GeneID:1013513;Name=NP_687724.1;Note=identified by match to PFAM protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=NP_687724.1;transl_table=11
NC_004116.1	RefSeq	gene	703498	704832	.	+	.	ID=gene801;Dbxref=GeneID:1013514;Name=SAG0710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0710
NC_004116.1	RefSeq	CDS	703498	704832	.	+	0	ID=cds689;Parent=gene801;Dbxref=Genbank:NP_687725.1,GeneID:1013514;Name=NP_687725.1;Note=identified by match to PFAM protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=NP_687725.1;transl_table=11
NC_004116.1	RefSeq	gene	705289	707232	.	+	.	ID=gene802;Dbxref=GeneID:1013515;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SAG0711
NC_004116.1	RefSeq	CDS	705289	707232	.	+	0	ID=cds690;Parent=gene802;Dbxref=Genbank:NP_687726.1,GeneID:1013515;Name=NP_687726.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=NP_687726.1;transl_table=11
NC_004116.1	RefSeq	gene	707454	708158	.	+	.	ID=gene803;Dbxref=GeneID:1013516;Name=SAG0712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0712
NC_004116.1	RefSeq	CDS	707454	708158	.	+	0	ID=cds691;Parent=gene803;Dbxref=Genbank:NP_687727.1,GeneID:1013516;Name=NP_687727.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_687727.1;transl_table=11
NC_004116.1	RefSeq	gene	708256	709275	.	+	.	ID=gene804;Dbxref=GeneID:1013517;Name=SAG0713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0713
NC_004116.1	RefSeq	CDS	708256	709275	.	+	0	ID=cds692;Parent=gene804;Dbxref=Genbank:NP_687728.1,GeneID:1013517;Name=NP_687728.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687728.1;transl_table=11
NC_004116.1	RefSeq	gene	709443	710009	.	+	.	ID=gene805;Dbxref=GeneID:1013518;Name=SAG0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0714
NC_004116.1	RefSeq	CDS	709443	710009	.	+	0	ID=cds693;Parent=gene805;Dbxref=Genbank:NP_687729.1,GeneID:1013518;Name=NP_687729.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687729.1;transl_table=11
NC_004116.1	RefSeq	gene	710058	710708	.	-	.	ID=gene806;Dbxref=GeneID:1013519;Name=SAG0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0715
NC_004116.1	RefSeq	CDS	710058	710708	.	-	0	ID=cds694;Parent=gene806;Dbxref=Genbank:NP_687730.1,GeneID:1013519;Name=NP_687730.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687730.1;transl_table=11
NC_004116.1	RefSeq	gene	710720	711415	.	-	.	ID=gene807;Dbxref=GeneID:1013520;Name=SAG0716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0716
NC_004116.1	RefSeq	CDS	710720	711415	.	-	0	ID=cds695;Parent=gene807;Dbxref=Genbank:NP_687731.1,GeneID:1013520;Name=NP_687731.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687731.1;transl_table=11
NC_004116.1	RefSeq	gene	711428	712228	.	-	.	ID=gene808;Dbxref=GeneID:1013521;Name=SAG0717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0717
NC_004116.1	RefSeq	CDS	711428	712228	.	-	0	ID=cds696;Parent=gene808;Dbxref=Genbank:NP_687732.1,GeneID:1013521;Name=NP_687732.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter amino acid-binding protein;protein_id=NP_687732.1;transl_table=11
NC_004116.1	RefSeq	gene	712240	712995	.	-	.	ID=gene809;Dbxref=GeneID:1013522;Name=SAG0718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0718
NC_004116.1	RefSeq	CDS	712240	712995	.	-	0	ID=cds697;Parent=gene809;Dbxref=Genbank:NP_687733.1,GeneID:1013522;Name=NP_687733.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_687733.1;transl_table=11
NC_004116.1	RefSeq	gene	713335	714045	.	+	.	ID=gene810;Dbxref=GeneID:1013523;Name=SAG0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0719
NC_004116.1	RefSeq	CDS	713335	714045	.	+	0	ID=cds698;Parent=gene810;Dbxref=Genbank:NP_687734.1,GeneID:1013523;Name=NP_687734.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_687734.1;transl_table=11
NC_004116.1	RefSeq	gene	714038	715387	.	+	.	ID=gene811;Dbxref=GeneID:1013524;Name=SAG0720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0720
NC_004116.1	RefSeq	CDS	714038	715387	.	+	0	ID=cds699;Parent=gene811;Dbxref=Genbank:NP_687735.1,GeneID:1013524;Name=NP_687735.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensory box histidine kinase;protein_id=NP_687735.1;transl_table=11
NC_004116.1	RefSeq	gene	715391	716200	.	+	.	ID=gene812;Dbxref=GeneID:1013525;Name=SAG0721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0721
NC_004116.1	RefSeq	CDS	715391	716200	.	+	0	ID=cds700;Parent=gene812;Dbxref=Genbank:NP_687736.1,GeneID:1013525;Name=NP_687736.1;Note=identified by match to PFAM protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=NP_687736.1;transl_table=11
NC_004116.1	RefSeq	gene	716203	716571	.	+	.	ID=gene813;Dbxref=GeneID:1013526;Name=SAG0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0722
NC_004116.1	RefSeq	CDS	716203	716571	.	+	0	ID=cds701;Parent=gene813;Dbxref=Genbank:NP_687737.1,GeneID:1013526;Name=NP_687737.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687737.1;transl_table=11
NC_004116.1	RefSeq	gene	716723	717433	.	+	.	ID=gene814;Dbxref=GeneID:1013527;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SAG0723
NC_004116.1	RefSeq	CDS	716723	717433	.	+	0	ID=cds702;Parent=gene814;Dbxref=Genbank:NP_687738.1,GeneID:1013527;Name=NP_687738.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=NP_687738.1;transl_table=11
NC_004116.1	RefSeq	gene	717441	720980	.	+	.	ID=gene815;Dbxref=GeneID:1013528;Name=SAG0724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0724
NC_004116.1	RefSeq	CDS	717441	720980	.	+	0	ID=cds703;Parent=gene815;Dbxref=Genbank:NP_687739.1,GeneID:1013528;Name=NP_687739.1;Note=identified by match to PFAM protein family HMM PF02463%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=chromosome segregation protein SMC;protein_id=NP_687739.1;transl_table=11
NC_004116.1	RefSeq	gene	721071	721868	.	+	.	ID=gene816;Dbxref=GeneID:1013529;Name=SAG0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0725
NC_004116.1	RefSeq	CDS	721071	721868	.	+	0	ID=cds704;Parent=gene816;Dbxref=Genbank:NP_687740.1,GeneID:1013529;Name=NP_687740.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687740.1;transl_table=11
NC_004116.1	RefSeq	gene	721868	722692	.	+	.	ID=gene817;Dbxref=GeneID:1013530;Name=SAG0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0726
NC_004116.1	RefSeq	CDS	721868	722692	.	+	0	ID=cds705;Parent=gene817;Dbxref=Genbank:NP_687741.1,GeneID:1013530;Name=NP_687741.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687741.1;transl_table=11
NC_004116.1	RefSeq	gene	722692	724302	.	+	.	ID=gene818;Dbxref=GeneID:1013531;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=SAG0727
NC_004116.1	RefSeq	CDS	722692	724302	.	+	0	ID=cds706;Parent=gene818;Dbxref=Genbank:NP_687742.1,GeneID:1013531;Name=NP_687742.1;Note=identified by match to PFAM protein family HMM PF00448;gbkey=CDS;gene=ftsY;product=signal recognition particle-docking protein FtsY;protein_id=NP_687742.1;transl_table=11
NC_004116.1	RefSeq	gene	724339	725151	.	-	.	ID=gene819;Dbxref=GeneID:1013532;Name=SAG0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0728
NC_004116.1	RefSeq	CDS	724339	725151	.	-	0	ID=cds707;Parent=gene819;Dbxref=Genbank:NP_687743.1,GeneID:1013532;Name=NP_687743.1;Note=similar to OMNI:NTL01SPL0427%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687743.1;transl_table=11
NC_004116.1	RefSeq	gene	725151	726053	.	-	.	ID=gene820;Dbxref=GeneID:1013533;Name=SAG0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0729
NC_004116.1	RefSeq	CDS	725151	726053	.	-	0	ID=cds708;Parent=gene820;Dbxref=Genbank:NP_687744.1,GeneID:1013533;Name=NP_687744.1;Note=similar to OMNI:NTL01SPL0428%3B identified by sequence similarity;gbkey=CDS;product=ABC transporter permease;protein_id=NP_687744.1;transl_table=11
NC_004116.1	RefSeq	gene	726059	726187	.	-	.	ID=gene821;Dbxref=GeneID:1013534;Name=SAG0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0730
NC_004116.1	RefSeq	CDS	726059	726187	.	-	0	ID=cds709;Parent=gene821;Dbxref=Genbank:NP_687745.1,GeneID:1013534;Name=NP_687745.1;Note=similar to OMNI:NTL01SPL0429%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687745.1;transl_table=11
NC_004116.1	RefSeq	gene	726320	727363	.	+	.	ID=gene822;Dbxref=GeneID:1013535;Name=SAG0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0731
NC_004116.1	RefSeq	CDS	726320	727363	.	+	0	ID=cds710;Parent=gene822;Dbxref=Genbank:NP_687746.1,GeneID:1013535;Name=NP_687746.1;Note=identified by match to PFAM protein family HMM PF00296;gbkey=CDS;product=luciferase family protein;protein_id=NP_687746.1;transl_table=11
NC_004116.1	RefSeq	gene	727468	729630	.	+	.	ID=gene823;Dbxref=GeneID:1013536;Name=SAG0732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0732
NC_004116.1	RefSeq	CDS	727468	729630	.	+	0	ID=cds711;Parent=gene823;Dbxref=Genbank:NP_687747.1,GeneID:1013536;Name=NP_687747.1;Note=identified by match to PFAM protein family HMM PF00575;gbkey=CDS;product=transcriptional accessory protein Tex;protein_id=NP_687747.1;transl_table=11
NC_004116.1	RefSeq	gene	729623	730051	.	+	.	ID=gene824;Dbxref=GeneID:1013537;Name=SAG0733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0733
NC_004116.1	RefSeq	CDS	729623	730051	.	+	0	ID=cds712;Parent=gene824;Dbxref=Genbank:NP_687748.1,GeneID:1013537;Name=NP_687748.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687748.1;transl_table=11
NC_004116.1	RefSeq	gene	730132	730395	.	+	.	ID=gene825;Dbxref=GeneID:1013538;Name=SAG0734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0734
NC_004116.1	RefSeq	CDS	730132	730395	.	+	0	ID=cds713;Parent=gene825;Dbxref=Genbank:NP_687749.1,GeneID:1013538;Name=NP_687749.1;Note=similar to SP:P23855 GB:X57560 PID:42541 GB:U00096 PID:1742136%3B identified by sequence similarity;gbkey=CDS;product=phage shock protein C;protein_id=NP_687749.1;transl_table=11
NC_004116.1	RefSeq	gene	730373	730507	.	+	.	ID=gene826;Dbxref=GeneID:1013539;Name=SAG0735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0735
NC_004116.1	RefSeq	CDS	730373	730507	.	+	0	ID=cds714;Parent=gene826;Dbxref=Genbank:NP_687750.1,GeneID:1013539;Name=NP_687750.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687750.1;transl_table=11
NC_004116.1	RefSeq	gene	730623	731558	.	+	.	ID=gene827;Dbxref=GeneID:1013540;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=SAG0736
NC_004116.1	RefSeq	CDS	730623	731558	.	+	0	ID=cds715;Parent=gene827;Dbxref=Genbank:NP_687751.1,GeneID:1013540;Name=NP_687751.1;Note=catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system;gbkey=CDS;gene=hprK;product=HPr kinase/phosphorylase;protein_id=NP_687751.1;transl_table=11
NC_004116.1	RefSeq	gene	731551	732324	.	+	.	ID=gene828;Dbxref=GeneID:1013541;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=SAG0737
NC_004116.1	RefSeq	CDS	731551	732324	.	+	0	ID=cds716;Parent=gene828;Dbxref=Genbank:NP_687752.1,GeneID:1013541;Name=NP_687752.1;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=NP_687752.1;transl_table=11
NC_004116.1	RefSeq	gene	732339	732737	.	+	.	ID=gene829;Dbxref=GeneID:1013542;Name=SAG0738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0738
NC_004116.1	RefSeq	CDS	732339	732737	.	+	0	ID=cds717;Parent=gene829;Dbxref=Genbank:NP_687753.1,GeneID:1013542;Name=NP_687753.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687753.1;transl_table=11
NC_004116.1	RefSeq	gene	732734	733165	.	+	.	ID=gene830;Dbxref=GeneID:1013543;Name=SAG0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0739
NC_004116.1	RefSeq	CDS	732734	733165	.	+	0	ID=cds718;Parent=gene830;Dbxref=Genbank:NP_687754.1,GeneID:1013543;Name=NP_687754.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687754.1;transl_table=11
NC_004116.1	RefSeq	gene	733206	733481	.	-	.	ID=gene831;Dbxref=GeneID:1013544;Name=SAG0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0740
NC_004116.1	RefSeq	CDS	733206	733481	.	-	0	ID=cds719;Parent=gene831;Dbxref=Genbank:NP_687755.1,GeneID:1013544;Name=NP_687755.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687755.1;transl_table=11
NC_004116.1	RefSeq	gene	733836	734747	.	+	.	ID=gene832;Dbxref=GeneID:1013545;Name=SAG0741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0741
NC_004116.1	RefSeq	CDS	733836	734747	.	+	0	ID=cds720;Parent=gene832;Dbxref=Genbank:NP_687756.1,GeneID:1013545;Name=NP_687756.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687756.1;transl_table=11
NC_004116.1	RefSeq	gene	734877	736163	.	+	.	ID=gene833;Dbxref=GeneID:1013546;Name=SAG0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0742
NC_004116.1	RefSeq	CDS	734877	736163	.	+	0	ID=cds721;Parent=gene833;Dbxref=Genbank:NP_687757.1,GeneID:1013546;Name=NP_687757.1;Note=identified by match to PFAM protein family HMM PF01136;gbkey=CDS;product=U32 family peptidase;protein_id=NP_687757.1;transl_table=11
NC_004116.1	RefSeq	gene	736290	736502	.	+	.	ID=gene834;Dbxref=GeneID:1013547;Name=SAG0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0743
NC_004116.1	RefSeq	CDS	736290	736502	.	+	0	ID=cds722;Parent=gene834;Dbxref=Genbank:NP_687758.1,GeneID:1013547;Name=NP_687758.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687758.1;transl_table=11
NC_004116.1	RefSeq	gene	736626	737423	.	+	.	ID=gene835;Dbxref=GeneID:1013548;Name=SAG0744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0744
NC_004116.1	RefSeq	CDS	736626	737423	.	+	0	ID=cds723;Parent=gene835;Dbxref=Genbank:NP_687759.1,GeneID:1013548;Name=NP_687759.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687759.1;transl_table=11
NC_004116.1	RefSeq	gene	737525	738865	.	-	.	ID=gene836;Dbxref=GeneID:1013549;Name=SAG0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0745
NC_004116.1	RefSeq	CDS	737525	738865	.	-	0	ID=cds724;Parent=gene836;Dbxref=Genbank:NP_687760.1,GeneID:1013549;Name=NP_687760.1;Note=identified by match to PFAM protein family HMM PF01566;gbkey=CDS;product=Mn2+/Fe2+ transporter;protein_id=NP_687760.1;transl_table=11
NC_004116.1	RefSeq	gene	739594	740703	.	+	.	ID=gene837;Dbxref=GeneID:1013550;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=SAG0746
NC_004116.1	RefSeq	CDS	739594	740703	.	+	0	ID=cds725;Parent=gene837;Dbxref=Genbank:NP_687761.1,GeneID:1013550;Name=NP_687761.1;Note=identified by match to PFAM protein family HMM PF00383;gbkey=CDS;gene=ribD;product=riboflavin biosynthesis protein RibD;protein_id=NP_687761.1;transl_table=11
NC_004116.1	RefSeq	gene	740684	741334	.	+	.	ID=gene838;Dbxref=GeneID:1013551;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=SAG0747
NC_004116.1	RefSeq	CDS	740684	741334	.	+	0	ID=cds726;Parent=gene838;Dbxref=Genbank:NP_687762.2,GeneID:1013551;Name=NP_687762.2;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;gene=ribE;product=riboflavin synthase subunit alpha;protein_id=NP_687762.2;transl_table=11
NC_004116.1	RefSeq	gene	741352	742545	.	+	.	ID=gene839;Dbxref=GeneID:1013552;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=SAG0748
NC_004116.1	RefSeq	CDS	741352	742545	.	+	0	ID=cds727;Parent=gene839;Dbxref=Genbank:NP_687763.1,GeneID:1013552;Name=NP_687763.1;Note=identified by match to PFAM protein family HMM PF00925;gbkey=CDS;gene=ribA;product=riboflavin biosynthesis protein RibA;protein_id=NP_687763.1;transl_table=11
NC_004116.1	RefSeq	gene	742560	743030	.	+	.	ID=gene840;Dbxref=GeneID:1013553;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=SAG0749
NC_004116.1	RefSeq	CDS	742560	743030	.	+	0	ID=cds728;Parent=gene840;Dbxref=Genbank:NP_687764.1,GeneID:1013553;Name=NP_687764.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=NP_687764.1;transl_table=11
NC_004116.1	RefSeq	gene	743105	744595	.	-	.	ID=gene841;Dbxref=GeneID:1013554;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SAG0750
NC_004116.1	RefSeq	CDS	743105	744595	.	-	0	ID=cds729;Parent=gene841;Dbxref=Genbank:NP_687765.1,GeneID:1013554;Name=NP_687765.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysyl-tRNA synthetase;protein_id=NP_687765.1;transl_table=11
NC_004116.1	RefSeq	gene	744770	745672	.	+	.	ID=gene842;Dbxref=GeneID:1013555;Name=SAG0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0751
NC_004116.1	RefSeq	CDS	744770	745672	.	+	0	ID=cds730;Parent=gene842;Dbxref=Genbank:NP_687766.1,GeneID:1013555;Name=NP_687766.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687766.1;transl_table=11
NC_004116.1	RefSeq	gene	745708	746349	.	-	.	ID=gene843;Dbxref=GeneID:1013556;Name=SAG0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0752
NC_004116.1	RefSeq	CDS	745708	746349	.	-	0	ID=cds731;Parent=gene843;Dbxref=Genbank:NP_687767.1,GeneID:1013556;Name=NP_687767.1;Note=identified by match to PFAM protein family HMM PF00300;gbkey=CDS;product=phosphoglycerate mutase family protein;protein_id=NP_687767.1;transl_table=11
NC_004116.1	RefSeq	gene	746371	746844	.	-	.	ID=gene844;Dbxref=GeneID:1013557;Name=SAG0753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0753
NC_004116.1	RefSeq	CDS	746371	746844	.	-	0	ID=cds732;Parent=gene844;Dbxref=Genbank:NP_687768.1,GeneID:1013557;Name=NP_687768.1;gbkey=CDS;product=EbsC family transcriptional regulator;protein_id=NP_687768.1;transl_table=11
NC_004116.1	RefSeq	gene	747139	747756	.	+	.	ID=gene845;Dbxref=GeneID:1013558;Name=SAG0754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0754
NC_004116.1	RefSeq	CDS	747139	747756	.	+	0	ID=cds733;Parent=gene845;Dbxref=Genbank:NP_687769.1,GeneID:1013558;Name=NP_687769.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687769.1;transl_table=11
NC_004116.1	RefSeq	gene	747789	748637	.	-	.	ID=gene846;Dbxref=GeneID:1013559;Name=SAG0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0755
NC_004116.1	RefSeq	CDS	747789	748637	.	-	0	ID=cds734;Parent=gene846;Dbxref=Genbank:NP_687770.1,GeneID:1013559;Name=NP_687770.1;Note=similar to OMNI:NTL01SPL0447%3B identified by sequence similarity;gbkey=CDS;product=U32 family peptidase;protein_id=NP_687770.1;transl_table=11
NC_004116.1	RefSeq	gene	748793	749317	.	+	.	ID=gene847;Dbxref=GeneID:1013560;Name=SAG0756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0756
NC_004116.1	RefSeq	CDS	748793	749317	.	+	0	ID=cds735;Parent=gene847;Dbxref=Genbank:NP_687771.1,GeneID:1013560;Name=NP_687771.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687771.1;transl_table=11
NC_004116.1	RefSeq	gene	749301	749690	.	+	.	ID=gene848;Dbxref=GeneID:1013561;Name=SAG0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0757
NC_004116.1	RefSeq	CDS	749301	749690	.	+	0	ID=cds736;Parent=gene848;Dbxref=Genbank:NP_687772.1,GeneID:1013561;Name=NP_687772.1;Note=similar to GP:13621804%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687772.1;transl_table=11
NC_004116.1	RefSeq	gene	749749	751548	.	-	.	ID=gene849;Dbxref=GeneID:1013562;Name=SAG0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0758
NC_004116.1	RefSeq	CDS	749749	751548	.	-	0	ID=cds737;Parent=gene849;Dbxref=Genbank:NP_687773.1,GeneID:1013562;Name=NP_687773.1;Note=identified by match to PFAM protein family HMM PF01432;gbkey=CDS;product=oligoendopeptidase F;protein_id=NP_687773.1;transl_table=11
NC_004116.1	RefSeq	gene	751757	754552	.	+	.	ID=gene850;Dbxref=GeneID:1013563;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=SAG0759
NC_004116.1	RefSeq	CDS	751757	754552	.	+	0	ID=cds738;Parent=gene850;Dbxref=Genbank:NP_687774.1,GeneID:1013563;Name=NP_687774.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=NP_687774.1;transl_table=11
NC_004116.1	RefSeq	gene	754678	755811	.	+	.	ID=gene851;Dbxref=GeneID:1013564;Name=SAG0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0760
NC_004116.1	RefSeq	CDS	754678	755811	.	+	0	ID=cds739;Parent=gene851;Dbxref=Genbank:NP_687775.1,GeneID:1013564;Name=NP_687775.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1548 transposase;protein_id=NP_687775.1;transl_table=11
NC_004116.1	RefSeq	gene	755984	757252	.	+	.	ID=gene852;Dbxref=GeneID:1013565;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=SAG0761
NC_004116.1	RefSeq	CDS	755984	757252	.	+	0	ID=cds740;Parent=gene852;Dbxref=Genbank:NP_687776.1,GeneID:1013565;Name=NP_687776.1;Note=identified by match to PFAM protein family HMM PF01098;gbkey=CDS;gene=ftsW;product=cell cycle protein FtsW;protein_id=NP_687776.1;transl_table=11
NC_004116.1	RefSeq	gene	757604	758800	.	+	.	ID=gene853;Dbxref=GeneID:1013566;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SAG0762
NC_004116.1	RefSeq	CDS	757604	758800	.	+	0	ID=cds741;Parent=gene853;Dbxref=Genbank:NP_687777.1,GeneID:1013566;Name=NP_687777.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=NP_687777.1;transl_table=11
NC_004116.1	RefSeq	gene	758981	759739	.	+	.	ID=gene854;Dbxref=GeneID:1013567;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=SAG0763
NC_004116.1	RefSeq	CDS	758981	759739	.	+	0	ID=cds742;Parent=gene854;Dbxref=Genbank:NP_687778.1,GeneID:1013567;Name=NP_687778.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=NP_687778.1;transl_table=11
NC_004116.1	RefSeq	gene	759916	760608	.	+	.	ID=gene855;Dbxref=GeneID:1013568;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=SAG0764
NC_004116.1	RefSeq	CDS	759916	760608	.	+	0	ID=cds743;Parent=gene855;Dbxref=Genbank:NP_687779.1,GeneID:1013568;Name=NP_687779.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase;protein_id=NP_687779.1;transl_table=11
NC_004116.1	RefSeq	gene	760737	762782	.	+	.	ID=gene856;Dbxref=GeneID:1013569;Name=SAG0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0765
NC_004116.1	RefSeq	CDS	760737	762782	.	+	0	ID=cds744;Parent=gene856;Dbxref=Genbank:NP_687780.1,GeneID:1013569;Name=NP_687780.1;Note=identified by match to PFAM protein family HMM PF00905;gbkey=CDS;product=penicillin-binding protein 2b;protein_id=NP_687780.1;transl_table=11
NC_004116.1	RefSeq	gene	762797	763393	.	+	.	ID=gene857;Dbxref=GeneID:1013570;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SAG0766
NC_004116.1	RefSeq	CDS	762797	763393	.	+	0	ID=cds745;Parent=gene857;Dbxref=Genbank:NP_687781.1,GeneID:1013570;Name=NP_687781.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=NP_687781.1;transl_table=11
NC_004116.1	RefSeq	gene	763534	764580	.	+	.	ID=gene858;Dbxref=GeneID:1013571;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=SAG0767
NC_004116.1	RefSeq	CDS	763534	764580	.	+	0	ID=cds746;Parent=gene858;Dbxref=Genbank:NP_687782.1,GeneID:1013571;Name=NP_687782.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanyl-alanine synthetase A;protein_id=NP_687782.1;transl_table=11
NC_004116.1	RefSeq	gene	764727	766094	.	+	.	ID=gene859;Dbxref=GeneID:1013572;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SAG0768
NC_004116.1	RefSeq	CDS	764727	766094	.	+	0	ID=cds747;Parent=gene859;Dbxref=Genbank:NP_687783.1,GeneID:1013572;Name=NP_687783.1;Note=identified by match to PFAM protein family HMM PF01225;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase;protein_id=NP_687783.1;transl_table=11
NC_004116.1	RefSeq	gene	766281	767501	.	+	.	ID=gene860;Dbxref=GeneID:1013573;Name=SAG0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0769
NC_004116.1	RefSeq	CDS	766281	767501	.	+	0	ID=cds748;Parent=gene860;Dbxref=Genbank:NP_687784.1,GeneID:1013573;Name=NP_687784.1;Note=identified by match to PFAM protein family HMM PF00083;gbkey=CDS;product=oxalate:formate antiporter;protein_id=NP_687784.1;transl_table=11
NC_004116.1	RefSeq	gene	767630	768316	.	+	.	ID=gene861;Dbxref=GeneID:1013574;Name=SAG0770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0770
NC_004116.1	RefSeq	CDS	767630	768316	.	+	0	ID=cds749;Parent=gene861;Dbxref=Genbank:NP_687785.1,GeneID:1013574;Name=NP_687785.1;Note=similar to OMNI:SP1668%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687785.1;transl_table=11
NC_004116.1	RefSeq	gene	768495	770033	.	+	.	ID=gene862;Dbxref=GeneID:1013575;Name=SAG0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0771
NC_004116.1	RefSeq	CDS	768495	770033	.	+	0	ID=cds750;Parent=gene862;Dbxref=Genbank:NP_687786.1,GeneID:1013575;Name=NP_687786.1;Note=identified by match to TIGR protein family HMM TIGR01167;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_687786.1;transl_table=11
NC_004116.1	RefSeq	gene	770210	771754	.	+	.	ID=gene863;Dbxref=GeneID:1013576;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SAG0772
NC_004116.1	RefSeq	CDS	770210	771754	.	+	0	ID=cds751;Parent=gene863;Dbxref=Genbank:NP_687787.1,GeneID:1013576;Name=NP_687787.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=NP_687787.1;transl_table=11
NC_004116.1	RefSeq	gene	771840	772220	.	+	.	ID=gene864;Dbxref=GeneID:1013577;Name=SAG0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0773
NC_004116.1	RefSeq	CDS	771840	772220	.	+	0	ID=cds752;Parent=gene864;Dbxref=Genbank:NP_687788.1,GeneID:1013577;Name=NP_687788.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687788.1;transl_table=11
NC_004116.1	RefSeq	gene	772341	773075	.	+	.	ID=gene865;Dbxref=GeneID:1013578;Name=SAG0774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0774
NC_004116.1	RefSeq	CDS	772341	773075	.	+	0	ID=cds753;Parent=gene865;Dbxref=Genbank:NP_687789.1,GeneID:1013578;Name=NP_687789.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687789.1;transl_table=11
NC_004116.1	RefSeq	gene	773068	773730	.	+	.	ID=gene866;Dbxref=GeneID:1013579;Name=SAG0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0775
NC_004116.1	RefSeq	CDS	773068	773730	.	+	0	ID=cds754;Parent=gene866;Dbxref=Genbank:NP_687790.1,GeneID:1013579;Name=NP_687790.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=NP_687790.1;transl_table=11
NC_004116.1	RefSeq	gene	773746	774576	.	+	.	ID=gene867;Dbxref=GeneID:1013580;Name=SAG0776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0776
NC_004116.1	RefSeq	CDS	773746	774576	.	+	0	ID=cds755;Parent=gene867;Dbxref=Genbank:NP_687791.1,GeneID:1013580;Name=NP_687791.1;Note=identified by match to PFAM protein family HMM PF03180;gbkey=CDS;product=YaeC family protein;protein_id=NP_687791.1;transl_table=11
NC_004116.1	RefSeq	gene	774811	776397	.	+	.	ID=gene868;Dbxref=GeneID:1013581;Name=SAG0777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0777
NC_004116.1	RefSeq	CDS	774811	776397	.	+	0	ID=cds756;Parent=gene868;Dbxref=Genbank:NP_687792.1,GeneID:1013581;Name=NP_687792.1;Note=identified by match to PFAM protein family HMM PF00270;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=NP_687792.1;transl_table=11
NC_004116.1	RefSeq	gene	776582	776848	.	-	.	ID=gene869;Dbxref=GeneID:1013582;Name=SAG0778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0778
NC_004116.1	RefSeq	CDS	776582	776848	.	-	0	ID=cds757;Parent=gene869;Dbxref=Genbank:NP_687793.1,GeneID:1013582;Name=NP_687793.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687793.1;transl_table=11
NC_004116.1	RefSeq	gene	776841	777605	.	-	.	ID=gene870;Dbxref=GeneID:1013583;Name=SAG0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0779
NC_004116.1	RefSeq	CDS	776841	777605	.	-	0	ID=cds758;Parent=gene870;Dbxref=Genbank:NP_687794.1,GeneID:1013583;Name=NP_687794.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687794.1;transl_table=11
NC_004116.1	RefSeq	gene	777740	778480	.	+	.	ID=gene871;Dbxref=GeneID:1013584;Name=SAG0780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0780
NC_004116.1	RefSeq	CDS	777740	778480	.	+	0	ID=cds759;Parent=gene871;Dbxref=Genbank:NP_687795.1,GeneID:1013584;Name=NP_687795.1;Note=identified by match to PFAM protein family HMM PF01553;gbkey=CDS;product=acyltransferase;protein_id=NP_687795.1;transl_table=11
NC_004116.1	RefSeq	gene	778580	779233	.	+	.	ID=gene872;Dbxref=GeneID:1013585;Name=celA;gbkey=Gene;gene=celA;gene_biotype=protein_coding;locus_tag=SAG0781
NC_004116.1	RefSeq	CDS	778580	779233	.	+	0	ID=cds760;Parent=gene872;Dbxref=Genbank:NP_687796.1,GeneID:1013585;Name=NP_687796.1;Note=identified by match to PFAM protein family HMM PF00633;gbkey=CDS;gene=celA;product=competence protein CelA;protein_id=NP_687796.1;transl_table=11
NC_004116.1	RefSeq	gene	779217	781454	.	+	.	ID=gene873;Dbxref=GeneID:1013586;Name=SAG0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0782
NC_004116.1	RefSeq	CDS	779217	781454	.	+	0	ID=cds761;Parent=gene873;Dbxref=Genbank:NP_687797.1,GeneID:1013586;Name=NP_687797.1;Note=identified by match to PFAM protein family HMM PF00753;gbkey=CDS;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=NP_687797.1;transl_table=11
NC_004116.1	RefSeq	gene	781580	782389	.	+	.	ID=gene874;Dbxref=GeneID:1013587;Name=SAG0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0783
NC_004116.1	RefSeq	CDS	781580	782389	.	+	0	ID=cds762;Parent=gene874;Dbxref=Genbank:NP_687798.1,GeneID:1013587;Name=NP_687798.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687798.1;transl_table=11
NC_004116.1	RefSeq	gene	782400	783344	.	+	.	ID=gene875;Dbxref=GeneID:1013588;Name=SAG0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0784
NC_004116.1	RefSeq	CDS	782400	783344	.	+	0	ID=cds763;Parent=gene875;Dbxref=Genbank:NP_687799.1,GeneID:1013588;Name=NP_687799.1;Note=identified by match to PFAM protein family HMM PF00356;gbkey=CDS;product=LacI family sugar-binding transcriptional regulator;protein_id=NP_687799.1;transl_table=11
NC_004116.1	RefSeq	gene	783403	784395	.	-	.	ID=gene876;Dbxref=GeneID:1013589;Name=SAG0785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0785
NC_004116.1	RefSeq	CDS	783403	784395	.	-	0	ID=cds764;Parent=gene876;Dbxref=Genbank:NP_687800.1,GeneID:1013589;Name=NP_687800.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687800.1;transl_table=11
NC_004116.1	RefSeq	gene	784571	785299	.	+	.	ID=gene877;Dbxref=GeneID:1013590;Name=SAG0786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0786
NC_004116.1	RefSeq	CDS	784571	785299	.	+	0	ID=cds765;Parent=gene877;Dbxref=Genbank:NP_687801.1,GeneID:1013590;Name=NP_687801.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687801.1;transl_table=11
NC_004116.1	RefSeq	gene	785353	786390	.	+	.	ID=gene878;Dbxref=GeneID:1013591;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SAG0787
NC_004116.1	RefSeq	CDS	785353	786390	.	+	0	ID=cds766;Parent=gene878;Dbxref=Genbank:NP_687802.1,GeneID:1013591;Name=NP_687802.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=NP_687802.1;transl_table=11
NC_004116.1	RefSeq	gene	786470	787078	.	+	.	ID=gene879;Dbxref=GeneID:1013592;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=SAG0788
NC_004116.1	RefSeq	CDS	786470	787078	.	+	0	ID=cds767;Parent=gene879;Dbxref=Genbank:NP_687803.1,GeneID:1013592;Name=NP_687803.1;Note=identified by match to PFAM protein family HMM PF00081;gbkey=CDS;gene=sodA;product=superoxide dismutase;protein_id=NP_687803.1;transl_table=11
NC_004116.1	RefSeq	gene	787416	788267	.	+	.	ID=gene880;Dbxref=GeneID:1013593;Name=SAG0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0789
NC_004116.1	RefSeq	CDS	787416	788267	.	+	0	ID=cds768;Parent=gene880;Dbxref=Genbank:NP_687804.1,GeneID:1013593;Name=NP_687804.1;Note=identified by match to PFAM protein family HMM PF00874;gbkey=CDS;product=transcriptional antiterminator LicT;protein_id=NP_687804.1;transl_table=11
NC_004116.1	RefSeq	gene	788260	790128	.	+	.	ID=gene881;Dbxref=GeneID:1013594;Name=SAG0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0790
NC_004116.1	RefSeq	CDS	788260	790128	.	+	0	ID=cds769;Parent=gene881;Dbxref=Genbank:NP_687805.1,GeneID:1013594;Name=NP_687805.1;Note=identified by match to PFAM protein family HMM PF00358;gbkey=CDS;product=PTS system beta-glucosides-specific transporter subunit IIABC;protein_id=NP_687805.1;transl_table=11
NC_004116.1	RefSeq	gene	790145	791572	.	+	.	ID=gene882;Dbxref=GeneID:1013595;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=SAG0791
NC_004116.1	RefSeq	CDS	790145	791572	.	+	0	ID=cds770;Parent=gene882;Dbxref=Genbank:NP_687806.1,GeneID:1013595;Name=NP_687806.1;Note=identified by match to PFAM protein family HMM PF00232;gbkey=CDS;gene=bglA;product=6-phospho-beta-glucosidase;protein_id=NP_687806.1;transl_table=11
NC_004116.1	RefSeq	gene	791641	792735	.	-	.	ID=gene883;Dbxref=GeneID:1013596;Name=SAG0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0792
NC_004116.1	RefSeq	CDS	791641	792735	.	-	0	ID=cds771;Parent=gene883;Dbxref=Genbank:NP_687807.1,GeneID:1013596;Name=NP_687807.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687807.1;transl_table=11
NC_004116.1	RefSeq	gene	792902	794044	.	+	.	ID=gene884;Dbxref=GeneID:1013597;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=SAG0793
NC_004116.1	RefSeq	CDS	792902	794044	.	+	0	ID=cds772;Parent=gene884;Dbxref=Genbank:NP_687808.1,GeneID:1013597;Name=NP_687808.1;Note=identified by match to PFAM protein family HMM PF02595%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;gene=garK;product=glycerate kinase;protein_id=NP_687808.1;transl_table=11
NC_004116.1	RefSeq	gene	794069	795325	.	+	.	ID=gene885;Dbxref=GeneID:1013598;Name=SAG0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0794
NC_004116.1	RefSeq	CDS	794069	795325	.	+	0	ID=cds773;Parent=gene885;Dbxref=Genbank:NP_687809.1,GeneID:1013598;Name=NP_687809.1;Note=identified by match to PFAM protein family HMM PF02447;gbkey=CDS;product=GntP family permease;protein_id=NP_687809.1;transl_table=11
NC_004116.1	RefSeq	gene	795426	796490	.	+	.	ID=gene886;Dbxref=GeneID:1013599;Name=SAG0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0795
NC_004116.1	RefSeq	CDS	795426	796490	.	+	0	ID=cds774;Parent=gene886;Dbxref=Genbank:NP_687810.1,GeneID:1013599;Name=NP_687810.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687810.1;transl_table=11
NC_004116.1	RefSeq	gene	796545	796988	.	-	.	ID=gene887;Dbxref=GeneID:1013600;Name=SAG0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0796
NC_004116.1	RefSeq	CDS	796545	796988	.	-	0	ID=cds775;Parent=gene887;Dbxref=Genbank:NP_687811.1,GeneID:1013600;Name=NP_687811.1;Note=identified by match to PFAM protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=NP_687811.1;transl_table=11
NC_004116.1	RefSeq	gene	797069	798097	.	-	.	ID=gene888;Dbxref=GeneID:1013601;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=SAG0797
NC_004116.1	RefSeq	CDS	797069	798097	.	-	0	ID=cds776;Parent=gene888;Dbxref=Genbank:NP_687812.1,GeneID:1013601;Name=NP_687812.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine--tRNA ribosyltransferase-isomerase;protein_id=NP_687812.1;transl_table=11
NC_004116.1	RefSeq	gene	798250	798930	.	+	.	ID=gene889;Dbxref=GeneID:1013602;Name=SAG0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0798
NC_004116.1	RefSeq	CDS	798250	798930	.	+	0	ID=cds777;Parent=gene889;Dbxref=Genbank:NP_687813.1,GeneID:1013602;Name=NP_687813.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687813.1;transl_table=11
NC_004116.1	RefSeq	gene	799081	799782	.	+	.	ID=gene890;Dbxref=GeneID:1013603;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SAG0799
NC_004116.1	RefSeq	CDS	799081	799782	.	+	0	ID=cds778;Parent=gene890;Dbxref=Genbank:NP_687814.1,GeneID:1013603;Name=NP_687814.1;Note=identified by match to PFAM protein family HMM PF01182;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate isomerase;protein_id=NP_687814.1;transl_table=11
NC_004116.1	RefSeq	gene	799854	800810	.	-	.	ID=gene891;Dbxref=GeneID:1013604;Name=SAG0800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0800
NC_004116.1	RefSeq	CDS	799854	800810	.	-	0	ID=cds779;Parent=gene891;Dbxref=Genbank:NP_687815.1,GeneID:1013604;Name=NP_687815.1;Note=identified by match to PFAM protein family HMM PF00043;gbkey=CDS;product=glutathione S-transferase family protein;protein_id=NP_687815.1;transl_table=11
NC_004116.1	RefSeq	gene	800906	801625	.	+	.	ID=gene892;Dbxref=GeneID:1013605;Name=SAG0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0801
NC_004116.1	RefSeq	CDS	800906	801625	.	+	0	ID=cds780;Parent=gene892;Dbxref=Genbank:NP_687816.1,GeneID:1013605;Name=NP_687816.1;Note=identified by match to PFAM protein family HMM PF00849;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=NP_687816.1;transl_table=11
NC_004116.1	RefSeq	gene	801600	801716	.	-	.	ID=gene893;Dbxref=GeneID:1013606;Name=SAG0802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0802
NC_004116.1	RefSeq	CDS	801600	801716	.	-	0	ID=cds781;Parent=gene893;Dbxref=Genbank:NP_687817.1,GeneID:1013606;Name=NP_687817.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687817.1;transl_table=11
NC_004116.1	RefSeq	gene	801698	802849	.	+	.	ID=gene894;Dbxref=GeneID:1013607;Name=SAG0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0803
NC_004116.1	RefSeq	CDS	801698	802849	.	+	0	ID=cds782;Parent=gene894;Dbxref=Genbank:NP_687818.1,GeneID:1013607;Name=NP_687818.1;Note=identified by match to PFAM protein family HMM PF00083;gbkey=CDS;product=major facilitator family protein;protein_id=NP_687818.1;transl_table=11
NC_004116.1	RefSeq	gene	802901	803848	.	+	.	ID=gene895;Dbxref=GeneID:1013608;Name=coiA;gbkey=Gene;gene=coiA;gene_biotype=protein_coding;locus_tag=SAG0804
NC_004116.1	RefSeq	CDS	802901	803848	.	+	0	ID=cds783;Parent=gene895;Dbxref=Genbank:NP_687819.1,GeneID:1013608;Name=NP_687819.1;Note=similar to OMNI:SP0978%3B identified by sequence similarity;gbkey=CDS;gene=coiA;product=competence protein CoiA;protein_id=NP_687819.1;transl_table=11
NC_004116.1	RefSeq	gene	803864	805669	.	+	.	ID=gene896;Dbxref=GeneID:1013609;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=SAG0805
NC_004116.1	RefSeq	CDS	803864	805669	.	+	0	ID=cds784;Parent=gene896;Dbxref=Genbank:NP_687820.1,GeneID:1013609;Name=NP_687820.1;Note=identified by match to PFAM protein family HMM PF01432;gbkey=CDS;gene=pepB;product=group B oligopeptidase PepB;protein_id=NP_687820.1;transl_table=11
NC_004116.1	RefSeq	gene	805864	806490	.	+	.	ID=gene897;Dbxref=GeneID:1013610;Name=SAG0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0806
NC_004116.1	RefSeq	CDS	805864	806490	.	+	0	ID=cds785;Parent=gene897;Dbxref=Genbank:NP_687821.1,GeneID:1013610;Name=NP_687821.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687821.1;transl_table=11
NC_004116.1	RefSeq	gene	806564	807271	.	+	.	ID=gene898;Dbxref=GeneID:1013611;Name=SAG0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0807
NC_004116.1	RefSeq	CDS	806564	807271	.	+	0	ID=cds786;Parent=gene898;Dbxref=Genbank:NP_687822.1,GeneID:1013611;Name=NP_687822.1;Note=identified by match to PFAM protein family HMM PF01596;gbkey=CDS;product=O-methyltransferase family protein;protein_id=NP_687822.1;transl_table=11
NC_004116.1	RefSeq	gene	807332	808261	.	+	.	ID=gene899;Dbxref=GeneID:1013612;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=SAG0808
NC_004116.1	RefSeq	CDS	807332	808261	.	+	0	ID=cds787;Parent=gene899;Dbxref=Genbank:NP_687823.1,GeneID:1013612;Name=NP_687823.1;Note=cis/trans isomerase of peptidylprolyl%3B PPIase%3B membrane-bound lipoprotein;gbkey=CDS;gene=prsA;product=foldase protein PrsA;protein_id=NP_687823.1;transl_table=11
NC_004116.1	RefSeq	gene	808503	808988	.	+	.	ID=gene900;Dbxref=GeneID:1013613;Name=SAG0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0809
NC_004116.1	RefSeq	CDS	808503	808988	.	+	0	ID=cds788;Parent=gene900;Dbxref=Genbank:NP_687824.1,GeneID:1013613;Name=NP_687824.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687824.1;transl_table=11
NC_004116.1	RefSeq	gene	809004	811622	.	+	.	ID=gene901;Dbxref=GeneID:1013614;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=SAG0810
NC_004116.1	RefSeq	CDS	809004	811622	.	+	0	ID=cds789;Parent=gene901;Dbxref=Genbank:NP_687825.1,GeneID:1013614;Name=NP_687825.1;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=NP_687825.1;transl_table=11
NC_004116.1	RefSeq	gene	811704	812420	.	+	.	ID=gene902;Dbxref=GeneID:1013615;Name=SAG0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0811
NC_004116.1	RefSeq	CDS	811704	812420	.	+	0	ID=cds790;Parent=gene902;Dbxref=Genbank:NP_687826.1,GeneID:1013615;Name=NP_687826.1;Note=similar to OMNI:NTL01BH4061%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687826.1;transl_table=11
NC_004116.1	RefSeq	gene	812508	813326	.	+	.	ID=gene903;Dbxref=GeneID:1013616;Name=SAG0812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0812
NC_004116.1	RefSeq	CDS	812508	813326	.	+	0	ID=cds791;Parent=gene903;Dbxref=Genbank:NP_687827.1,GeneID:1013616;Name=NP_687827.1;Note=identified by match to PFAM protein family HMM PF01501;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_687827.1;transl_table=11
NC_004116.1	RefSeq	gene	813470	813715	.	+	.	ID=gene904;Dbxref=GeneID:1013617;Name=SAG0813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0813
NC_004116.1	RefSeq	CDS	813470	813715	.	+	0	ID=cds792;Parent=gene904;Dbxref=Genbank:NP_687828.1,GeneID:1013617;Name=NP_687828.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687828.1;transl_table=11
NC_004116.1	RefSeq	gene	813754	814041	.	+	.	ID=gene905;Dbxref=GeneID:1013618;Name=SAG0814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0814
NC_004116.1	RefSeq	CDS	813754	814041	.	+	0	ID=cds793;Parent=gene905;Dbxref=Genbank:NP_687829.1,GeneID:1013618;Name=NP_687829.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687829.1;transl_table=11
NC_004116.1	RefSeq	gene	814086	814301	.	+	.	ID=gene906;Dbxref=GeneID:1013619;Name=SAG0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0815
NC_004116.1	RefSeq	CDS	814086	814301	.	+	0	ID=cds794;Parent=gene906;Dbxref=Genbank:NP_687830.1,GeneID:1013619;Name=NP_687830.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_687830.1;transl_table=11
NC_004116.1	RefSeq	gene	814301	815062	.	+	.	ID=gene907;Dbxref=GeneID:1013620;Name=SAG0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0816
NC_004116.1	RefSeq	CDS	814301	815062	.	+	0	ID=cds795;Parent=gene907;Dbxref=Genbank:NP_687831.1,GeneID:1013620;Name=NP_687831.1;Note=similar to OMNI:NTL01SPL1088%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687831.1;transl_table=11
NC_004116.1	RefSeq	gene	815147	815710	.	-	.	ID=gene908;Dbxref=GeneID:1013621;Name=SAG0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0817
NC_004116.1	RefSeq	CDS	815147	815710	.	-	0	ID=cds796;Parent=gene908;Dbxref=Genbank:NP_687832.1,GeneID:1013621;Name=NP_687832.1;Note=similar to OMNI:NTL01SPL0446%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_687832.1;transl_table=11
NC_004116.1	RefSeq	gene	815951	816910	.	-	.	ID=gene909;Dbxref=GeneID:1013622;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=SAG0818
NC_004116.1	RefSeq	CDS	815951	816910	.	-	0	ID=cds797;Parent=gene909;Dbxref=Genbank:NP_687833.1,GeneID:1013622;Name=NP_687833.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;gene=nrdF;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=NP_687833.1;transl_table=11
NC_004116.1	RefSeq	gene	817113	819272	.	-	.	ID=gene910;Dbxref=GeneID:1013623;Name=nrdE-2;gbkey=Gene;gene=nrdE-2;gene_biotype=protein_coding;locus_tag=SAG0819
NC_004116.1	RefSeq	CDS	817113	819272	.	-	0	ID=cds798;Parent=gene910;Dbxref=Genbank:NP_687834.1,GeneID:1013623;Name=NP_687834.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;gene=nrdE-2;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=NP_687834.1;transl_table=11
NC_004116.1	RefSeq	gene	819350	819574	.	-	.	ID=gene911;Dbxref=GeneID:1013624;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=SAG0820
NC_004116.1	RefSeq	CDS	819350	819574	.	-	0	ID=cds799;Parent=gene911;Dbxref=Genbank:NP_687835.1,GeneID:1013624;Name=NP_687835.1;gbkey=CDS;gene=nrdH;product=ribonucleoside-diphosphate reductase 2%2C NrdH-redoxin;protein_id=NP_687835.1;transl_table=11
NC_004116.1	RefSeq	gene	819957	820220	.	+	.	ID=gene912;Dbxref=GeneID:1013625;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=SAG0821
NC_004116.1	RefSeq	CDS	819957	820220	.	+	0	ID=cds800;Parent=gene912;Dbxref=Genbank:NP_687836.1,GeneID:1013625;Name=NP_687836.1;Note=identified by match to PFAM protein family HMM PF00381;gbkey=CDS;gene=ptsH;product=phosphocarrier protein HPr;protein_id=NP_687836.1;transl_table=11
NC_004116.1	RefSeq	gene	820225	821958	.	+	.	ID=gene913;Dbxref=GeneID:1013626;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=SAG0822
NC_004116.1	RefSeq	CDS	820225	821958	.	+	0	ID=cds801;Parent=gene913;Dbxref=Genbank:NP_687837.1,GeneID:1013626;Name=NP_687837.1;Note=identified by match to PFAM protein family HMM PF00391;gbkey=CDS;gene=ptsI;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=NP_687837.1;transl_table=11
NC_004116.1	RefSeq	gene	822108	823535	.	+	.	ID=gene914;Dbxref=GeneID:1013627;Name=gapN;gbkey=Gene;gene=gapN;gene_biotype=protein_coding;locus_tag=SAG0823
NC_004116.1	RefSeq	CDS	822108	823535	.	+	0	ID=cds802;Parent=gene914;Dbxref=Genbank:NP_687838.1,GeneID:1013627;Name=NP_687838.1;Note=identified by match to PFAM protein family HMM PF00171;gbkey=CDS;gene=gapN;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=NP_687838.1;transl_table=11
NC_004116.1	RefSeq	gene	823675	824928	.	+	.	ID=gene915;Dbxref=GeneID:1013628;Name=SAG0824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0824
NC_004116.1	RefSeq	CDS	823675	824928	.	+	0	ID=cds803;Parent=gene915;Dbxref=Genbank:NP_687839.1,GeneID:1013628;Name=NP_687839.1;Note=identified by match to PFAM protein family HMM PF01522;gbkey=CDS;product=polysaccharide deacetylase;protein_id=NP_687839.1;transl_table=11
NC_004116.1	RefSeq	gene	824961	826043	.	-	.	ID=gene916;Dbxref=GeneID:1013629;Name=SAG0825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0825
NC_004116.1	RefSeq	CDS	824961	826043	.	-	0	ID=cds804;Parent=gene916;Dbxref=Genbank:NP_687840.1,GeneID:1013629;Name=NP_687840.1;Note=identified by match to PFAM protein family HMM PF00270;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=NP_687840.1;transl_table=11
NC_004116.1	RefSeq	gene	826188	826817	.	+	.	ID=gene917;Dbxref=GeneID:1013630;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=SAG0826
NC_004116.1	RefSeq	CDS	826188	826817	.	+	0	ID=cds805;Parent=gene917;Dbxref=Genbank:NP_687841.1,GeneID:1013630;Name=NP_687841.1;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;gbkey=CDS;gene=udk;product=uridine kinase;protein_id=NP_687841.1;transl_table=11
NC_004116.1	RefSeq	gene	826904	827401	.	+	.	ID=gene918;Dbxref=GeneID:1013631;Name=SAG0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0827
NC_004116.1	RefSeq	CDS	826904	827401	.	+	0	ID=cds806;Parent=gene918;Dbxref=Genbank:NP_687842.1,GeneID:1013631;Name=NP_687842.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687842.1;transl_table=11
NC_004116.1	RefSeq	gene	827401	829065	.	+	.	ID=gene919;Dbxref=GeneID:1013632;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=SAG0828
NC_004116.1	RefSeq	CDS	827401	829065	.	+	0	ID=cds807;Parent=gene919;Dbxref=Genbank:NP_687843.1,GeneID:1013632;Name=NP_687843.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;gene=dnaX;product=DNA polymerase III subunits gamma and tau;protein_id=NP_687843.1;transl_table=11
NC_004116.1	RefSeq	gene	829154	829348	.	+	.	ID=gene920;Dbxref=GeneID:1013633;Name=SAG0829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0829
NC_004116.1	RefSeq	CDS	829154	829348	.	+	0	ID=cds808;Parent=gene920;Dbxref=Genbank:NP_687844.1,GeneID:1013633;Name=NP_687844.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687844.1;transl_table=11
NC_004116.1	RefSeq	gene	829329	830264	.	-	.	ID=gene921;Dbxref=GeneID:1013634;Name=SAG0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0830
NC_004116.1	RefSeq	CDS	829329	830264	.	-	0	ID=cds809;Parent=gene921;Dbxref=Genbank:NP_687845.1,GeneID:1013634;Name=NP_687845.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=biotin--protein ligase;protein_id=NP_687845.1;transl_table=11
NC_004116.1	RefSeq	gene	830449	831645	.	+	.	ID=gene922;Dbxref=GeneID:1013635;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=SAG0831
NC_004116.1	RefSeq	CDS	830449	831645	.	+	0	ID=cds810;Parent=gene922;Dbxref=Genbank:NP_687846.1,GeneID:1013635;Name=NP_687846.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=NP_687846.1;transl_table=11
NC_004116.1	RefSeq	gene	832166	834427	.	+	.	ID=gene923;Dbxref=GeneID:1013636;Name=SAG0832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0832
NC_004116.1	RefSeq	CDS	832166	834427	.	+	0	ID=cds811;Parent=gene923;Dbxref=Genbank:NP_687847.1,GeneID:1013636;Name=NP_687847.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687847.1;transl_table=11
NC_004116.1	RefSeq	gene	834494	835039	.	+	.	ID=gene924;Dbxref=GeneID:1013637;Name=SAG0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0833
NC_004116.1	RefSeq	CDS	834494	835039	.	+	0	ID=cds812;Parent=gene924;Dbxref=Genbank:NP_687848.1,GeneID:1013637;Name=NP_687848.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687848.1;transl_table=11
NC_004116.1	RefSeq	gene	835199	835327	.	+	.	ID=gene925;Dbxref=GeneID:1013638;Name=SAG0834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0834
NC_004116.1	RefSeq	CDS	835199	835327	.	+	0	ID=cds813;Parent=gene925;Dbxref=Genbank:NP_687849.1,GeneID:1013638;Name=NP_687849.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687849.1;transl_table=11
NC_004116.1	RefSeq	gene	835435	836001	.	+	.	ID=gene926;Dbxref=GeneID:1013639;Name=SAG0835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0835
NC_004116.1	RefSeq	CDS	835435	836001	.	+	0	ID=cds814;Parent=gene926;Dbxref=Genbank:NP_687850.1,GeneID:1013639;Name=NP_687850.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687850.1;transl_table=11
NC_004116.1	RefSeq	gene	835998	836552	.	+	.	ID=gene927;Dbxref=GeneID:1013640;Name=SAG0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0836
NC_004116.1	RefSeq	CDS	835998	836552	.	+	0	ID=cds815;Parent=gene927;Dbxref=Genbank:NP_687851.1,GeneID:1013640;Name=NP_687851.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687851.1;transl_table=11
NC_004116.1	RefSeq	gene	836556	837842	.	+	.	ID=gene928;Dbxref=GeneID:1013641;Name=SAG0837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0837
NC_004116.1	RefSeq	CDS	836556	837842	.	+	0	ID=cds816;Parent=gene928;Dbxref=Genbank:NP_687852.1,GeneID:1013641;Name=NP_687852.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687852.1;transl_table=11
NC_004116.1	RefSeq	gene	837797	838498	.	+	.	ID=gene929;Dbxref=GeneID:1013642;Name=SAG0838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0838
NC_004116.1	RefSeq	CDS	837797	838498	.	+	0	ID=cds817;Parent=gene929;Dbxref=Genbank:NP_687853.1,GeneID:1013642;Name=NP_687853.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687853.1;transl_table=11
NC_004116.1	RefSeq	gene	838582	839262	.	+	.	ID=gene930;Dbxref=GeneID:1013643;Name=SAG0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0839
NC_004116.1	RefSeq	CDS	838582	839262	.	+	0	ID=cds818;Parent=gene930;Dbxref=Genbank:NP_687854.1,GeneID:1013643;Name=NP_687854.1;Note=identified by match to PFAM protein family HMM PF03070;gbkey=CDS;product=TenA family transcriptional regulator;protein_id=NP_687854.1;transl_table=11
NC_004116.1	RefSeq	gene	839264	840061	.	+	.	ID=gene931;Dbxref=GeneID:1013644;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=SAG0840
NC_004116.1	RefSeq	CDS	839264	840061	.	+	0	ID=cds819;Parent=gene931;Dbxref=Genbank:NP_687855.1,GeneID:1013644;Name=NP_687855.1;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;gbkey=CDS;gene=thiD;product=phosphomethylpyrimidine kinase;protein_id=NP_687855.1;transl_table=11
NC_004116.1	RefSeq	gene	840063	840833	.	+	.	ID=gene932;Dbxref=GeneID:1013645;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=SAG0841
NC_004116.1	RefSeq	CDS	840063	840833	.	+	0	ID=cds820;Parent=gene932;Dbxref=Genbank:NP_687856.1,GeneID:1013645;Name=NP_687856.1;Note=catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP;gbkey=CDS;gene=thiM;product=hydroxyethylthiazole kinase;protein_id=NP_687856.1;transl_table=11
NC_004116.1	RefSeq	gene	840847	841518	.	+	.	ID=gene933;Dbxref=GeneID:1013646;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=SAG0842
NC_004116.1	RefSeq	CDS	840847	841518	.	+	0	ID=cds821;Parent=gene933;Dbxref=Genbank:NP_687857.1,GeneID:1013646;Name=NP_687857.1;Note=Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate;gbkey=CDS;gene=thiE;product=thiamine-phosphate pyrophosphorylase;protein_id=NP_687857.1;transl_table=11
NC_004116.1	RefSeq	gene	841645	842904	.	+	.	ID=gene934;Dbxref=GeneID:1013647;Name=murA-1;gbkey=Gene;gene=murA-1;gene_biotype=protein_coding;locus_tag=SAG0843
NC_004116.1	RefSeq	CDS	841645	842904	.	+	0	ID=cds822;Parent=gene934;Dbxref=Genbank:NP_687858.1,GeneID:1013647;Name=NP_687858.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murA-1;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=NP_687858.1;transl_table=11
NC_004116.1	RefSeq	gene	843006	843560	.	+	.	ID=gene935;Dbxref=GeneID:1013648;Name=SAG0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0844
NC_004116.1	RefSeq	CDS	843006	843560	.	+	0	ID=cds823;Parent=gene935;Dbxref=Genbank:NP_687859.1,GeneID:1013648;Name=NP_687859.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687859.1;transl_table=11
NC_004116.1	RefSeq	gene	843553	844836	.	+	.	ID=gene936;Dbxref=GeneID:1013649;Name=SAG0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0845
NC_004116.1	RefSeq	CDS	843553	844836	.	+	0	ID=cds824;Parent=gene936;Dbxref=Genbank:NP_687860.1,GeneID:1013649;Name=NP_687860.1;Note=identified by match to PFAM protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=NP_687860.1;transl_table=11
NC_004116.1	RefSeq	gene	844859	845719	.	+	.	ID=gene937;Dbxref=GeneID:1013650;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=SAG0846
NC_004116.1	RefSeq	CDS	844859	845719	.	+	0	ID=cds825;Parent=gene937;Dbxref=Genbank:NP_687861.1,GeneID:1013650;Name=NP_687861.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=NP_687861.1;transl_table=11
NC_004116.1	RefSeq	gene	845721	846641	.	+	.	ID=gene938;Dbxref=GeneID:1013651;Name=SAG0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0847
NC_004116.1	RefSeq	CDS	845721	846641	.	+	0	ID=cds826;Parent=gene938;Dbxref=Genbank:NP_687862.1,GeneID:1013651;Name=NP_687862.1;Note=identified by match to TIGR protein family HMM TIGR00765;gbkey=CDS;product=ribonuclease BN;protein_id=NP_687862.1;transl_table=11
NC_004116.1	RefSeq	gene	846658	847113	.	-	.	ID=gene939;Dbxref=GeneID:1013652;Name=SAG0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0848
NC_004116.1	RefSeq	CDS	846658	847113	.	-	0	ID=cds827;Parent=gene939;Dbxref=Genbank:NP_687863.1,GeneID:1013652;Name=NP_687863.1;Note=similar to GB:X73124 SP:P39602 PID:413958 GB:AL009126%3B identified by sequence similarity;gbkey=CDS;product=GtrA family protein;protein_id=NP_687863.1;transl_table=11
NC_004116.1	RefSeq	gene	847295	847804	.	+	.	ID=gene940;Dbxref=GeneID:1013653;Name=SAG0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0849
NC_004116.1	RefSeq	CDS	847295	847804	.	+	0	ID=cds828;Parent=gene940;Dbxref=Genbank:NP_687864.1,GeneID:1013653;Name=NP_687864.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687864.1;transl_table=11
NC_004116.1	RefSeq	gene	847944	849902	.	+	.	ID=gene941;Dbxref=GeneID:1013654;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SAG0850
NC_004116.1	RefSeq	CDS	847944	849902	.	+	0	ID=cds829;Parent=gene941;Dbxref=Genbank:NP_687865.1,GeneID:1013654;Name=NP_687865.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=NP_687865.1;transl_table=11
NC_004116.1	RefSeq	gene	849914	850933	.	+	.	ID=gene942;Dbxref=GeneID:1013655;Name=SAG0851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0851
NC_004116.1	RefSeq	CDS	849914	850933	.	+	0	ID=cds830;Parent=gene942;Dbxref=Genbank:NP_687866.1,GeneID:1013655;Name=NP_687866.1;Note=similar to YegS from E. coli;gbkey=CDS;product=lipid kinase;protein_id=NP_687866.1;transl_table=11
NC_004116.1	RefSeq	gene	850937	853237	.	+	.	ID=gene943;Dbxref=GeneID:1013656;Name=SAG0852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0852
NC_004116.1	RefSeq	CDS	850937	853237	.	+	0	ID=cds831;Parent=gene943;Dbxref=Genbank:NP_687867.1,GeneID:1013656;Name=NP_687867.1;Note=identified by match to PFAM protein family HMM PF00128;gbkey=CDS;product=pullulanase;protein_id=NP_687867.1;transl_table=11
NC_004116.1	RefSeq	gene	853443	855311	.	+	.	ID=gene944;Dbxref=GeneID:1013657;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=SAG0853
NC_004116.1	RefSeq	CDS	853443	855311	.	+	0	ID=cds832;Parent=gene944;Dbxref=Genbank:NP_687868.1,GeneID:1013657;Name=NP_687868.1;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;gbkey=CDS;gene=glgB;product=glycogen branching protein;protein_id=NP_687868.1;transl_table=11
NC_004116.1	RefSeq	gene	855353	856492	.	+	.	ID=gene945;Dbxref=GeneID:1013658;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=SAG0854
NC_004116.1	RefSeq	CDS	855353	856492	.	+	0	ID=cds833;Parent=gene945;Dbxref=Genbank:NP_687869.1,GeneID:1013658;Name=NP_687869.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=NP_687869.1;transl_table=11
NC_004116.1	RefSeq	gene	856482	857614	.	+	.	ID=gene946;Dbxref=GeneID:1013659;Name=glgD;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to SP:P39124%3B identified by sequence similarity%3B glycogen biosynthesis protein GlgD%2C authentic frameshift;gbkey=Gene;gene=glgD;gene_biotype=other;locus_tag=SAG0855
NC_004116.1	RefSeq	gene	857611	859041	.	+	.	ID=gene947;Dbxref=GeneID:1013660;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=SAG0856
NC_004116.1	RefSeq	CDS	857611	859041	.	+	0	ID=cds834;Parent=gene947;Dbxref=Genbank:NP_687870.1,GeneID:1013660;Name=NP_687870.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=NP_687870.1;transl_table=11
NC_004116.1	RefSeq	gene	859373	859573	.	+	.	ID=gene948;Dbxref=GeneID:1013661;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=SAG0857
NC_004116.1	RefSeq	CDS	859373	859573	.	+	0	ID=cds835;Parent=gene948;Dbxref=Genbank:NP_687871.1,GeneID:1013661;Name=NP_687871.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B subunit C is part of the membrane proton channel F0;gbkey=CDS;gene=atpE;product=ATP synthase F0F1 subunit C;protein_id=NP_687871.1;transl_table=11
NC_004116.1	RefSeq	gene	859606	860322	.	+	.	ID=gene949;Dbxref=GeneID:1013662;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=SAG0858
NC_004116.1	RefSeq	CDS	859606	860322	.	+	0	ID=cds836;Parent=gene949;Dbxref=Genbank:NP_687872.1,GeneID:1013662;Name=NP_687872.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;gene=atpB;product=ATP synthase F0F1 subunit A;protein_id=NP_687872.1;transl_table=11
NC_004116.1	RefSeq	gene	860340	860837	.	+	.	ID=gene950;Dbxref=GeneID:1013663;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=SAG0859
NC_004116.1	RefSeq	CDS	860340	860837	.	+	0	ID=cds837;Parent=gene950;Dbxref=Genbank:NP_687873.1,GeneID:1013663;Name=NP_687873.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;gene=atpF;product=ATP synthase F0F1 subunit B;protein_id=NP_687873.1;transl_table=11
NC_004116.1	RefSeq	gene	860837	861373	.	+	.	ID=gene951;Dbxref=GeneID:1013664;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=SAG0860
NC_004116.1	RefSeq	CDS	860837	861373	.	+	0	ID=cds838;Parent=gene951;Dbxref=Genbank:NP_687874.1,GeneID:1013664;Name=NP_687874.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=atpH;product=ATP synthase F0F1 subunit delta;protein_id=NP_687874.1;transl_table=11
NC_004116.1	RefSeq	gene	861389	862894	.	+	.	ID=gene952;Dbxref=GeneID:1013665;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=SAG0861
NC_004116.1	RefSeq	CDS	861389	862894	.	+	0	ID=cds839;Parent=gene952;Dbxref=Genbank:NP_687875.1,GeneID:1013665;Name=NP_687875.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;gene=atpA;product=ATP synthase F0F1 subunit alpha;protein_id=NP_687875.1;transl_table=11
NC_004116.1	RefSeq	gene	862910	863791	.	+	.	ID=gene953;Dbxref=GeneID:1013666;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=SAG0862
NC_004116.1	RefSeq	CDS	862910	863791	.	+	0	ID=cds840;Parent=gene953;Dbxref=Genbank:NP_687876.1,GeneID:1013666;Name=NP_687876.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;gene=atpG;product=ATP synthase F0F1 subunit gamma;protein_id=NP_687876.1;transl_table=11
NC_004116.1	RefSeq	gene	863865	865271	.	+	.	ID=gene954;Dbxref=GeneID:1013667;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=SAG0863
NC_004116.1	RefSeq	CDS	863865	865271	.	+	0	ID=cds841;Parent=gene954;Dbxref=Genbank:NP_687877.1,GeneID:1013667;Name=NP_687877.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;gbkey=CDS;gene=atpD;product=ATP synthase F0F1 subunit beta;protein_id=NP_687877.1;transl_table=11
NC_004116.1	RefSeq	gene	865284	865697	.	+	.	ID=gene955;Dbxref=GeneID:1013668;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=SAG0864
NC_004116.1	RefSeq	CDS	865284	865697	.	+	0	ID=cds842;Parent=gene955;Dbxref=Genbank:NP_687878.1,GeneID:1013668;Name=NP_687878.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase F0F1 subunit epsilon;protein_id=NP_687878.1;transl_table=11
NC_004116.1	RefSeq	gene	865762	865992	.	+	.	ID=gene956;Dbxref=GeneID:1013669;Name=SAG0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0865
NC_004116.1	RefSeq	CDS	865762	865992	.	+	0	ID=cds843;Parent=gene956;Dbxref=Genbank:NP_687879.1,GeneID:1013669;Name=NP_687879.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687879.1;transl_table=11
NC_004116.1	RefSeq	gene	866055	867326	.	+	.	ID=gene957;Dbxref=GeneID:1013670;Name=murA-2;gbkey=Gene;gene=murA-2;gene_biotype=protein_coding;locus_tag=SAG0866
NC_004116.1	RefSeq	CDS	866055	867326	.	+	0	ID=cds844;Parent=gene957;Dbxref=Genbank:NP_687880.1,GeneID:1013670;Name=NP_687880.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murA-2;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=NP_687880.1;transl_table=11
NC_004116.1	RefSeq	gene	867328	867519	.	+	.	ID=gene958;Dbxref=GeneID:1013671;Name=SAG0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0867
NC_004116.1	RefSeq	CDS	867328	867519	.	+	0	ID=cds845;Parent=gene958;Dbxref=Genbank:NP_687881.1,GeneID:1013671;Name=NP_687881.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687881.1;transl_table=11
NC_004116.1	RefSeq	gene	867594	868451	.	+	.	ID=gene959;Dbxref=GeneID:1013672;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=SAG0868
NC_004116.1	RefSeq	CDS	867594	868451	.	+	0	ID=cds846;Parent=gene959;Dbxref=Genbank:NP_687882.1,GeneID:1013672;Name=NP_687882.1;Note=identified by match to PFAM protein family HMM PF01223;gbkey=CDS;gene=endA;product=DNA-entry nuclease;protein_id=NP_687882.1;transl_table=11
NC_004116.1	RefSeq	gene	868743	869783	.	+	.	ID=gene960;Dbxref=GeneID:1013673;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=SAG0869
NC_004116.1	RefSeq	CDS	868743	869783	.	+	0	ID=cds847;Parent=gene960;Dbxref=Genbank:NP_687883.1,GeneID:1013673;Name=NP_687883.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily;gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=NP_687883.1;transl_table=11
NC_004116.1	RefSeq	gene	869866	870387	.	+	.	ID=gene961;Dbxref=GeneID:1013674;Name=SAG0870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0870
NC_004116.1	RefSeq	CDS	869866	870387	.	+	0	ID=cds848;Parent=gene961;Dbxref=Genbank:NP_687884.1,GeneID:1013674;Name=NP_687884.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687884.1;transl_table=11
NC_004116.1	RefSeq	gene	870441	872846	.	+	.	ID=gene962;Dbxref=GeneID:1013675;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SAG0871
NC_004116.1	RefSeq	CDS	870441	872846	.	+	0	ID=cds849;Parent=gene962;Dbxref=Genbank:NP_687885.1,GeneID:1013675;Name=NP_687885.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=NP_687885.1;transl_table=11
NC_004116.1	RefSeq	gene	872915	873817	.	-	.	ID=gene963;Dbxref=GeneID:1013676;Name=SAG0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0872
NC_004116.1	RefSeq	CDS	872915	873817	.	-	0	ID=cds850;Parent=gene963;Dbxref=Genbank:NP_687886.1,GeneID:1013676;Name=NP_687886.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687886.1;transl_table=11
NC_004116.1	RefSeq	gene	873995	877228	.	+	.	ID=gene964;Dbxref=GeneID:1013677;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=SAG0873
NC_004116.1	RefSeq	CDS	873995	877228	.	+	0	ID=cds851;Parent=gene964;Dbxref=Genbank:NP_687887.1,GeneID:1013677;Name=NP_687887.1;Note=similar to GP:2909715%3B identified by sequence similarity%3B RexAB system found in Gram positive bacteria appears to fulfill the biological roles of RecBCD found in Gram negative bacteria.;gbkey=CDS;gene=rexB;product=exonuclease RexB;protein_id=NP_687887.1;transl_table=11
NC_004116.1	RefSeq	gene	877218	880841	.	+	.	ID=gene965;Dbxref=GeneID:1013678;Name=rexA;gbkey=Gene;gene=rexA;gene_biotype=protein_coding;locus_tag=SAG0874
NC_004116.1	RefSeq	CDS	877218	880841	.	+	0	ID=cds852;Parent=gene965;Dbxref=Genbank:NP_687888.1,GeneID:1013678;Name=NP_687888.1;Note=identified by match to PFAM protein family HMM PF00580%3B RexAB system found in Gram positive bacteria appears to fulfill the biological roles of RecBCD found in Gram negative bacteria.;gbkey=CDS;gene=rexA;product=exonuclease RexA;protein_id=NP_687888.1;transl_table=11
NC_004116.1	RefSeq	gene	880854	881771	.	+	.	ID=gene966;Dbxref=GeneID:1013679;Name=SAG0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0875
NC_004116.1	RefSeq	CDS	880854	881771	.	+	0	ID=cds853;Parent=gene966;Dbxref=Genbank:NP_687889.1,GeneID:1013679;Name=NP_687889.1;Note=identified by match to PFAM protein family HMM PF01544;gbkey=CDS;product=magnesium transporter CorA family protein;protein_id=NP_687889.1;transl_table=11
NC_004116.1	RefSeq	gene	881804	883180	.	-	.	ID=gene967;Dbxref=GeneID:1013680;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=SAG0876
NC_004116.1	RefSeq	CDS	881804	883180	.	-	0	ID=cds854;Parent=gene967;Dbxref=Genbank:NP_687890.1,GeneID:1013680;Name=NP_687890.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=NP_687890.1;transl_table=11
NC_004116.1	RefSeq	gene	883308	885218	.	+	.	ID=gene968;Dbxref=GeneID:1013681;Name=SAG0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0877
NC_004116.1	RefSeq	CDS	883308	885218	.	+	0	ID=cds855;Parent=gene968;Dbxref=Genbank:NP_687891.1,GeneID:1013681;Name=NP_687891.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687891.1;transl_table=11
NC_004116.1	RefSeq	gene	885368	886336	.	+	.	ID=gene969;Dbxref=GeneID:1013682;Name=SAG0878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0878
NC_004116.1	RefSeq	CDS	885368	886336	.	+	0	ID=cds856;Parent=gene969;Dbxref=Genbank:NP_687892.1,GeneID:1013682;Name=NP_687892.1;Note=identified by match to PFAM protein family HMM PF00676;gbkey=CDS;product=acetoin dehydrogenase%2C thymine PPi dependent%2C E1 component subunit alpha;protein_id=NP_687892.1;transl_table=11
NC_004116.1	RefSeq	gene	886411	887409	.	+	.	ID=gene970;Dbxref=GeneID:1013683;Name=SAG0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0879
NC_004116.1	RefSeq	CDS	886411	887409	.	+	0	ID=cds857;Parent=gene970;Dbxref=Genbank:NP_687893.1,GeneID:1013683;Name=NP_687893.1;Note=identified by match to PFAM protein family HMM PF02779;gbkey=CDS;product=acetoin dehydrogenase%2C thymine PPi dependent%2C E1 component subunit beta;protein_id=NP_687893.1;transl_table=11
NC_004116.1	RefSeq	gene	887536	888924	.	+	.	ID=gene971;Dbxref=GeneID:1013684;Name=SAG0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0880
NC_004116.1	RefSeq	CDS	887536	888924	.	+	0	ID=cds858;Parent=gene971;Dbxref=Genbank:NP_687894.1,GeneID:1013684;Name=NP_687894.1;Note=Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA;gbkey=CDS;product=branched-chain alpha-keto acid dehydrogenase subunit E2;protein_id=NP_687894.1;transl_table=11
NC_004116.1	RefSeq	gene	888984	890741	.	+	.	ID=gene972;Dbxref=GeneID:1013685;Name=SAG0881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0881
NC_004116.1	RefSeq	CDS	888984	890741	.	+	0	ID=cds859;Parent=gene972;Dbxref=Genbank:NP_687895.1,GeneID:1013685;Name=NP_687895.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;product=acetoin dehydrogenase%2C thymine PPi dependent%2C E3 component%2C dihydrolipoamide dehydrogenase;protein_id=NP_687895.1;transl_table=11
NC_004116.1	RefSeq	gene	890839	891828	.	+	.	ID=gene973;Dbxref=GeneID:1013686;Name=lplA-1;gbkey=Gene;gene=lplA-1;gene_biotype=protein_coding;locus_tag=SAG0882
NC_004116.1	RefSeq	CDS	890839	891828	.	+	0	ID=cds860;Parent=gene973;Dbxref=Genbank:NP_687896.1,GeneID:1013686;Name=NP_687896.1;Note=identified by match to PFAM protein family HMM PF02539;gbkey=CDS;gene=lplA-1;product=lipoate-protein ligase A;protein_id=NP_687896.1;transl_table=11
NC_004116.1	RefSeq	gene	891936	892721	.	-	.	ID=gene974;Dbxref=GeneID:1013687;Name=SAG0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0883
NC_004116.1	RefSeq	CDS	891936	892721	.	-	0	ID=cds861;Parent=gene974;Dbxref=Genbank:NP_687897.1,GeneID:1013687;Name=NP_687897.1;Note=similar to OMNI:NTL01LL1120%3B identified by sequence similarity;gbkey=CDS;product=cobyric acid synthase;protein_id=NP_687897.1;transl_table=11
NC_004116.1	RefSeq	gene	892721	894064	.	-	.	ID=gene975;Dbxref=GeneID:1013688;Name=SAG0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0884
NC_004116.1	RefSeq	CDS	892721	894064	.	-	0	ID=cds862;Parent=gene975;Dbxref=Genbank:NP_687898.1,GeneID:1013688;Name=NP_687898.1;gbkey=CDS;product=mur ligase family protein;protein_id=NP_687898.1;transl_table=11
NC_004116.1	RefSeq	gene	894204	895055	.	+	.	ID=gene976;Dbxref=GeneID:1013689;Name=SAG0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0885
NC_004116.1	RefSeq	CDS	894204	895055	.	+	0	ID=cds863;Parent=gene976;Dbxref=Genbank:NP_687899.1,GeneID:1013689;Name=NP_687899.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687899.1;transl_table=11
NC_004116.1	RefSeq	gene	895058	896017	.	+	.	ID=gene977;Dbxref=GeneID:1013690;Name=SAG0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0886
NC_004116.1	RefSeq	CDS	895058	896017	.	+	0	ID=cds864;Parent=gene977;Dbxref=Genbank:NP_687900.1,GeneID:1013690;Name=NP_687900.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687900.1;transl_table=11
NC_004116.1	RefSeq	gene	896071	897423	.	+	.	ID=gene978;Dbxref=GeneID:1013691;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=SAG0887
NC_004116.1	RefSeq	CDS	896071	897423	.	+	0	ID=cds865;Parent=gene978;Dbxref=Genbank:NP_687901.1,GeneID:1013691;Name=NP_687901.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=NP_687901.1;transl_table=11
NC_004116.1	RefSeq	gene	897546	897917	.	+	.	ID=gene979;Dbxref=GeneID:1013692;Name=SAG0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0888
NC_004116.1	RefSeq	CDS	897546	897917	.	+	0	ID=cds866;Parent=gene979;Dbxref=Genbank:NP_687902.1,GeneID:1013692;Name=NP_687902.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687902.1;transl_table=11
NC_004116.1	RefSeq	gene	897942	898322	.	+	.	ID=gene980;Dbxref=GeneID:1013693;Name=SAG0889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0889
NC_004116.1	RefSeq	CDS	897942	898322	.	+	0	ID=cds867;Parent=gene980;Dbxref=Genbank:NP_687903.1,GeneID:1013693;Name=NP_687903.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687903.1;transl_table=11
NC_004116.1	RefSeq	gene	898414	899544	.	+	.	ID=gene981;Dbxref=GeneID:1013694;Name=SAG0890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0890
NC_004116.1	RefSeq	CDS	898414	899544	.	+	0	ID=cds868;Parent=gene981;Dbxref=Genbank:NP_687904.1,GeneID:1013694;Name=NP_687904.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=NP_687904.1;transl_table=11
NC_004116.1	RefSeq	gene	899548	900285	.	+	.	ID=gene982;Dbxref=GeneID:1013695;Name=SAG0891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0891
NC_004116.1	RefSeq	CDS	899548	900285	.	+	0	ID=cds869;Parent=gene982;Dbxref=Genbank:NP_687905.1,GeneID:1013695;Name=NP_687905.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687905.1;transl_table=11
NC_004116.1	RefSeq	gene	900286	901056	.	+	.	ID=gene983;Dbxref=GeneID:1013696;Name=SAG0892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0892
NC_004116.1	RefSeq	CDS	900286	901056	.	+	0	ID=cds870;Parent=gene983;Dbxref=Genbank:NP_687906.1,GeneID:1013696;Name=NP_687906.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_687906.1;transl_table=11
NC_004116.1	RefSeq	gene	901046	901702	.	+	.	ID=gene984;Dbxref=GeneID:1013697;Name=SAG0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0893
NC_004116.1	RefSeq	CDS	901046	901702	.	+	0	ID=cds871;Parent=gene984;Dbxref=Genbank:NP_687907.1,GeneID:1013697;Name=NP_687907.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687907.1;transl_table=11
NC_004116.1	RefSeq	gene	902090	906202	.	+	.	ID=gene985;Dbxref=GeneID:1013698;Name=SAG0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0894
NC_004116.1	RefSeq	CDS	902090	906202	.	+	0	ID=cds872;Parent=gene985;Dbxref=Genbank:NP_687908.1,GeneID:1013698;Name=NP_687908.1;Note=similar to OMNI:NTL01SPL0811%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687908.1;transl_table=11
NC_004116.1	RefSeq	gene	906204	907073	.	+	.	ID=gene986;Dbxref=GeneID:1013699;Name=SAG0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0895
NC_004116.1	RefSeq	CDS	906204	907073	.	+	0	ID=cds873;Parent=gene986;Dbxref=Genbank:NP_687909.1,GeneID:1013699;Name=NP_687909.1;gbkey=CDS;product=lipoyl-binding domain-containing protein;protein_id=NP_687909.1;transl_table=11
NC_004116.1	RefSeq	gene	907085	907411	.	+	.	ID=gene987;Dbxref=GeneID:1013700;Name=SAG0896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0896
NC_004116.1	RefSeq	CDS	907085	907411	.	+	0	ID=cds874;Parent=gene987;Dbxref=Genbank:NP_687910.1,GeneID:1013700;Name=NP_687910.1;Note=similar to OMNI:NTL01SPL0813%3B identified by sequence similarity;gbkey=CDS;product=oxidoreductase;protein_id=NP_687910.1;transl_table=11
NC_004116.1	RefSeq	gene	907398	908063	.	+	.	ID=gene988;Dbxref=GeneID:1013701;Name=SAG0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0897
NC_004116.1	RefSeq	CDS	907398	908063	.	+	0	ID=cds875;Parent=gene988;Dbxref=Genbank:NP_687911.1,GeneID:1013701;Name=NP_687911.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687911.1;transl_table=11
NC_004116.1	RefSeq	gene	908175	908426	.	+	.	ID=gene989;Dbxref=GeneID:1013702;Name=SAG0898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0898
NC_004116.1	RefSeq	CDS	908175	908426	.	+	0	ID=cds876;Parent=gene989;Dbxref=Genbank:NP_687912.1,GeneID:1013702;Name=NP_687912.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687912.1;transl_table=11
NC_004116.1	RefSeq	gene	908439	908612	.	+	.	ID=gene990;Dbxref=GeneID:1013703;Name=SAG0899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0899
NC_004116.1	RefSeq	CDS	908439	908612	.	+	0	ID=cds877;Parent=gene990;Dbxref=Genbank:NP_687913.1,GeneID:1013703;Name=NP_687913.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687913.1;transl_table=11
NC_004116.1	RefSeq	gene	908847	909017	.	+	.	ID=gene991;Dbxref=GeneID:1013704;Name=SAG0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0900
NC_004116.1	RefSeq	CDS	908847	909017	.	+	0	ID=cds878;Parent=gene991;Dbxref=Genbank:NP_687914.1,GeneID:1013704;Name=NP_687914.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687914.1;transl_table=11
NC_004116.1	RefSeq	gene	909099	909482	.	+	.	ID=gene992;Dbxref=GeneID:1013705;Name=SAG0901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0901
NC_004116.1	RefSeq	CDS	909099	909482	.	+	0	ID=cds879;Parent=gene992;Dbxref=Genbank:NP_687915.1,GeneID:1013705;Name=NP_687915.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687915.1;transl_table=11
NC_004116.1	RefSeq	gene	909460	909597	.	+	.	ID=gene993;Dbxref=GeneID:1013706;Name=SAG0902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0902
NC_004116.1	RefSeq	CDS	909460	909597	.	+	0	ID=cds880;Parent=gene993;Dbxref=Genbank:NP_687916.1,GeneID:1013706;Name=NP_687916.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687916.1;transl_table=11
NC_004116.1	RefSeq	gene	909601	909735	.	+	.	ID=gene994;Dbxref=GeneID:1013707;Name=SAG0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0903
NC_004116.1	RefSeq	CDS	909601	909735	.	+	0	ID=cds881;Parent=gene994;Dbxref=Genbank:NP_687917.1,GeneID:1013707;Name=NP_687917.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687917.1;transl_table=11
NC_004116.1	RefSeq	gene	910104	910274	.	+	.	ID=gene995;Dbxref=GeneID:1013708;Name=SAG0904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0904
NC_004116.1	RefSeq	CDS	910104	910274	.	+	0	ID=cds882;Parent=gene995;Dbxref=Genbank:NP_687918.1,GeneID:1013708;Name=NP_687918.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687918.1;transl_table=11
NC_004116.1	RefSeq	gene	910407	910823	.	+	.	ID=gene996;Dbxref=GeneID:1013709;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=SAG0905
NC_004116.1	RefSeq	CDS	910407	910823	.	+	0	ID=cds883;Parent=gene996;Dbxref=Genbank:NP_687919.1,GeneID:1013709;Name=NP_687919.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase;protein_id=NP_687919.1;transl_table=11
NC_004116.1	RefSeq	gene	910959	912791	.	+	.	ID=gene997;Dbxref=GeneID:1013710;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=SAG0906
NC_004116.1	RefSeq	CDS	910959	912791	.	+	0	ID=cds884;Parent=gene997;Dbxref=Genbank:NP_687920.1,GeneID:1013710;Name=NP_687920.1;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=NP_687920.1;transl_table=11
NC_004116.1	RefSeq	gene	913038	915671	.	+	.	ID=gene998;Dbxref=GeneID:1013711;Name=SAG0907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0907
NC_004116.1	RefSeq	CDS	913038	915671	.	+	0	ID=cds885;Parent=gene998;Dbxref=Genbank:NP_687921.1,GeneID:1013711;Name=NP_687921.1;Note=identified by match to PFAM protein family HMM PF00560%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687921.1;transl_table=11
NC_004116.1	RefSeq	gene	915819	916430	.	+	.	ID=gene999;Dbxref=GeneID:1013712;Name=SAG0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0908
NC_004116.1	RefSeq	CDS	915819	916430	.	+	0	ID=cds886;Parent=gene999;Dbxref=Genbank:NP_687922.1,GeneID:1013712;Name=NP_687922.1;Note=identified by match to PFAM protein family HMM PF01966;gbkey=CDS;product=HD domain-containing protein;protein_id=NP_687922.1;transl_table=11
NC_004116.1	RefSeq	gene	916439	916903	.	+	.	ID=gene1000;Dbxref=GeneID:1013713;Name=SAG0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0909
NC_004116.1	RefSeq	CDS	916439	916903	.	+	0	ID=cds887;Parent=gene1000;Dbxref=Genbank:NP_687923.1,GeneID:1013713;Name=NP_687923.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687923.1;transl_table=11
NC_004116.1	RefSeq	gene	916903	917337	.	+	.	ID=gene1001;Dbxref=GeneID:1013714;Name=SAG0910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0910
NC_004116.1	RefSeq	CDS	916903	917337	.	+	0	ID=cds888;Parent=gene1001;Dbxref=Genbank:NP_687924.1,GeneID:1013714;Name=NP_687924.1;Note=this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress;gbkey=CDS;product=methionine sulfoxide reductase B;protein_id=NP_687924.1;transl_table=11
NC_004116.1	RefSeq	gene	917489	920281	.	+	.	ID=gene1002;Dbxref=GeneID:1013715;Name=SAG0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0911
NC_004116.1	RefSeq	CDS	917489	920281	.	+	0	ID=cds889;Parent=gene1002;Dbxref=Genbank:NP_687925.1,GeneID:1013715;Name=NP_687925.1;Note=identified by match to PFAM protein family HMM PF00122;gbkey=CDS;product=cation transporter E1-E2 family ATPase;protein_id=NP_687925.1;transl_table=11
NC_004116.1	RefSeq	gene	920281	921384	.	+	.	ID=gene1003;Dbxref=GeneID:1013716;Name=SAG0912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0912
NC_004116.1	RefSeq	CDS	920281	921384	.	+	0	ID=cds890;Parent=gene1003;Dbxref=Genbank:NP_687926.1,GeneID:1013716;Name=NP_687926.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687926.1;transl_table=11
NC_004116.1	RefSeq	gene	921505	922143	.	-	.	ID=gene1004;Dbxref=GeneID:1013717;Name=cat;gbkey=Gene;gene=cat;gene_biotype=protein_coding;locus_tag=SAG0913
NC_004116.1	RefSeq	CDS	921505	922143	.	-	0	ID=cds891;Parent=gene1004;Dbxref=Genbank:NP_687927.1,GeneID:1013717;Name=NP_687927.1;Note=identified by match to PFAM protein family HMM PF00132;gbkey=CDS;gene=cat;product=chloramphenicol acetyltransferase;protein_id=NP_687927.1;transl_table=11
NC_004116.1	RefSeq	gene	922854	923465	.	+	.	ID=gene1005;Dbxref=GeneID:1013718;Name=SAG0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0914
NC_004116.1	RefSeq	CDS	922854	923465	.	+	0	ID=cds892;Parent=gene1005;Dbxref=Genbank:NP_687928.1,GeneID:1013718;Name=NP_687928.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687928.1;transl_table=11
NC_004116.1	RefSeq	gene	923639	924856	.	-	.	ID=gene1006;Dbxref=GeneID:1013719;Name=SAG0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0915
NC_004116.1	RefSeq	CDS	923639	924856	.	-	0	ID=cds893;Parent=gene1006;Dbxref=Genbank:NP_687929.1,GeneID:1013719;Name=NP_687929.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=Tn916%2C transposase;protein_id=NP_687929.1;transl_table=11
NC_004116.1	RefSeq	gene	924938	925141	.	-	.	ID=gene1007;Dbxref=GeneID:1013720;Name=SAG0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0916
NC_004116.1	RefSeq	CDS	924938	925141	.	-	0	ID=cds894;Parent=gene1007;Dbxref=Genbank:NP_687930.1,GeneID:1013720;Name=NP_687930.1;Note=similar to SP:P27452 GB:S56948 GB:X61025 PID:47462%3B identified by sequence similarity;gbkey=CDS;product=Tn916%2C excisionase;protein_id=NP_687930.1;transl_table=11
NC_004116.1	RefSeq	gene	925125	925376	.	+	.	ID=gene1008;Dbxref=GeneID:1013721;Name=SAG0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0917
NC_004116.1	RefSeq	CDS	925125	925376	.	+	0	ID=cds895;Parent=gene1008;Dbxref=Genbank:NP_687931.1,GeneID:1013721;Name=NP_687931.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687931.1;transl_table=11
NC_004116.1	RefSeq	gene	925602	925832	.	-	.	ID=gene1009;Dbxref=GeneID:1013722;Name=SAG0918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0918
NC_004116.1	RefSeq	CDS	925602	925832	.	-	0	ID=cds896;Parent=gene1009;Dbxref=Genbank:NP_687932.1,GeneID:1013722;Name=NP_687932.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687932.1;transl_table=11
NC_004116.1	RefSeq	gene	925829	926302	.	-	.	ID=gene1010;Dbxref=GeneID:1013723;Name=SAG0919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0919
NC_004116.1	RefSeq	CDS	925829	926302	.	-	0	ID=cds897;Parent=gene1010;Dbxref=Genbank:NP_687933.1,GeneID:1013723;Name=NP_687933.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687933.1;transl_table=11
NC_004116.1	RefSeq	gene	926480	926551	.	-	.	ID=gene1011;Dbxref=GeneID:1013724;Name=SAG0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0920
NC_004116.1	RefSeq	CDS	926480	926551	.	-	0	ID=cds898;Parent=gene1011;Dbxref=Genbank:NP_687934.1,GeneID:1013724;Name=NP_687934.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687934.1;transl_table=11
NC_004116.1	RefSeq	gene	926756	927109	.	+	.	ID=gene1012;Dbxref=GeneID:1013725;Name=SAG0921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0921
NC_004116.1	RefSeq	CDS	926756	927109	.	+	0	ID=cds899;Parent=gene1012;Dbxref=Genbank:NP_687935.1,GeneID:1013725;Name=NP_687935.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Tn916%2C transcriptional regulator;protein_id=NP_687935.1;transl_table=11
NC_004116.1	RefSeq	gene	927169	927354	.	-	.	ID=gene1013;Dbxref=GeneID:1013726;Name=SAG0922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0922
NC_004116.1	RefSeq	CDS	927169	927354	.	-	0	ID=cds900;Parent=gene1013;Dbxref=Genbank:NP_687936.1,GeneID:1013726;Name=NP_687936.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687936.1;transl_table=11
NC_004116.1	RefSeq	gene	927455	929374	.	-	.	ID=gene1014;Dbxref=GeneID:1013727;Name=tetM;gbkey=Gene;gene=tetM;gene_biotype=protein_coding;locus_tag=SAG0923
NC_004116.1	RefSeq	CDS	927455	929374	.	-	0	ID=cds901;Parent=gene1014;Dbxref=Genbank:NP_687937.1,GeneID:1013727;Name=NP_687937.1;Note=identified by match to PFAM protein family HMM PF00009;gbkey=CDS;gene=tetM;product=tetracycline resistance protein;protein_id=NP_687937.1;transl_table=11
NC_004116.1	RefSeq	gene	929390	929476	.	-	.	ID=gene1015;Dbxref=GeneID:1013728;Name=SAG0924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0924
NC_004116.1	RefSeq	CDS	929390	929476	.	-	0	ID=cds902;Parent=gene1015;Dbxref=Genbank:NP_687938.1,GeneID:1013728;Name=NP_687938.1;Note=regulates the transcription of tet(M) by attenuation;gbkey=CDS;product=tetracycline resistance determinant leader peptide;protein_id=NP_687938.1;transl_table=11
NC_004116.1	RefSeq	gene	929751	930683	.	-	.	ID=gene1016;Dbxref=GeneID:1013729;Name=SAG0925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0925
NC_004116.1	RefSeq	CDS	929751	930683	.	-	0	ID=cds903;Parent=gene1016;Dbxref=Genbank:NP_687939.1,GeneID:1013729;Name=NP_687939.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687939.1;transl_table=11
NC_004116.1	RefSeq	gene	930680	931681	.	-	.	ID=gene1017;Dbxref=GeneID:1013730;Name=SAG0926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0926
NC_004116.1	RefSeq	CDS	930680	931681	.	-	0	ID=cds904;Parent=gene1017;Dbxref=Genbank:NP_687940.1,GeneID:1013730;Name=NP_687940.1;Note=identified by match to PFAM protein family HMM PF00877;gbkey=CDS;product=Tn916%2C NLP/P60 family protein;protein_id=NP_687940.1;transl_table=11
NC_004116.1	RefSeq	gene	931678	933855	.	-	.	ID=gene1018;Dbxref=GeneID:1013731;Name=SAG0927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0927
NC_004116.1	RefSeq	CDS	931678	933855	.	-	0	ID=cds905;Parent=gene1018;Dbxref=Genbank:NP_687941.1,GeneID:1013731;Name=NP_687941.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687941.1;transl_table=11
NC_004116.1	RefSeq	gene	933858	936304	.	-	.	ID=gene1019;Dbxref=GeneID:1013732;Name=SAG0928;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B Tn916%2C hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG0928
NC_004116.1	RefSeq	gene	936288	936794	.	-	.	ID=gene1020;Dbxref=GeneID:1013733;Name=SAG0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0929
NC_004116.1	RefSeq	CDS	936288	936794	.	-	0	ID=cds906;Parent=gene1020;Dbxref=Genbank:NP_687942.1,GeneID:1013733;Name=NP_687942.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687942.1;transl_table=11
NC_004116.1	RefSeq	gene	936769	937266	.	-	.	ID=gene1021;Dbxref=GeneID:1013734;Name=SAG0930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0930
NC_004116.1	RefSeq	CDS	936769	937266	.	-	0	ID=cds907;Parent=gene1021;Dbxref=Genbank:NP_687943.1,GeneID:1013734;Name=NP_687943.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687943.1;transl_table=11
NC_004116.1	RefSeq	gene	937383	937604	.	-	.	ID=gene1022;Dbxref=GeneID:1013735;Name=SAG0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0931
NC_004116.1	RefSeq	CDS	937383	937604	.	-	0	ID=cds908;Parent=gene1022;Dbxref=Genbank:NP_687944.1,GeneID:1013735;Name=NP_687944.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687944.1;transl_table=11
NC_004116.1	RefSeq	gene	937647	938852	.	-	.	ID=gene1023;Dbxref=GeneID:1013736;Name=SAG0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0932
NC_004116.1	RefSeq	CDS	937647	938852	.	-	0	ID=cds909;Parent=gene1023;Dbxref=Genbank:NP_687945.1,GeneID:1013736;Name=NP_687945.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Tn916%2C transcriptional regulator;protein_id=NP_687945.1;transl_table=11
NC_004116.1	RefSeq	gene	939030	940415	.	-	.	ID=gene1024;Dbxref=GeneID:1013737;Name=SAG0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0933
NC_004116.1	RefSeq	CDS	939030	940415	.	-	0	ID=cds910;Parent=gene1024;Dbxref=Genbank:NP_687946.1,GeneID:1013737;Name=NP_687946.1;Note=identified by match to PFAM protein family HMM PF01580;gbkey=CDS;product=DNA translocase FtsK;protein_id=NP_687946.1;transl_table=11
NC_004116.1	RefSeq	gene	940444	940830	.	-	.	ID=gene1025;Dbxref=GeneID:1013738;Name=SAG0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0934
NC_004116.1	RefSeq	CDS	940444	940830	.	-	0	ID=cds911;Parent=gene1025;Dbxref=Genbank:NP_687947.1,GeneID:1013738;Name=NP_687947.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687947.1;transl_table=11
NC_004116.1	RefSeq	gene	940846	941160	.	-	.	ID=gene1026;Dbxref=GeneID:1013739;Name=SAG0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0935
NC_004116.1	RefSeq	CDS	940846	941160	.	-	0	ID=cds912;Parent=gene1026;Dbxref=Genbank:NP_687948.1,GeneID:1013739;Name=NP_687948.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687948.1;transl_table=11
NC_004116.1	RefSeq	gene	941183	941302	.	-	.	ID=gene1027;Dbxref=GeneID:1013740;Name=SAG0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0936
NC_004116.1	RefSeq	CDS	941183	941302	.	-	0	ID=cds913;Parent=gene1027;Dbxref=Genbank:NP_687949.1,GeneID:1013740;Name=NP_687949.1;gbkey=CDS;product=Tn916 hypothetical protein;protein_id=NP_687949.1;transl_table=11
NC_004116.1	RefSeq	gene	941541	943033	.	-	.	ID=gene1028;Dbxref=GeneID:1013741;Name=SAG0937;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:SP1715%3B identified by sequence similarity%3B ABC transporter ATP-binding protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG0937
NC_004116.1	RefSeq	gene	943034	943402	.	-	.	ID=gene1029;Dbxref=GeneID:1013742;Name=SAG0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0938
NC_004116.1	RefSeq	CDS	943034	943402	.	-	0	ID=cds914;Parent=gene1029;Dbxref=Genbank:NP_687950.1,GeneID:1013742;Name=NP_687950.1;Note=identified by match to PFAM protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_687950.1;transl_table=11
NC_004116.1	RefSeq	gene	943547	946651	.	+	.	ID=gene1030;Dbxref=GeneID:1013743;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SAG0939
NC_004116.1	RefSeq	CDS	943547	946651	.	+	0	ID=cds915;Parent=gene1030;Dbxref=Genbank:NP_687951.1,GeneID:1013743;Name=NP_687951.1;Note=Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.;gbkey=CDS;gene=dnaE;product=DNA polymerase III DnaE;protein_id=NP_687951.1;transl_table=11
NC_004116.1	RefSeq	gene	946732	947754	.	+	.	ID=gene1031;Dbxref=GeneID:1013744;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=SAG0940
NC_004116.1	RefSeq	CDS	946732	947754	.	+	0	ID=cds916;Parent=gene1031;Dbxref=Genbank:NP_687952.1,GeneID:1013744;Name=NP_687952.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;gene=pfkA;product=6-phosphofructokinase;protein_id=NP_687952.1;transl_table=11
NC_004116.1	RefSeq	gene	947803	949305	.	+	.	ID=gene1032;Dbxref=GeneID:1013745;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=SAG0941
NC_004116.1	RefSeq	CDS	947803	949305	.	+	0	ID=cds917;Parent=gene1032;Dbxref=Genbank:NP_687953.1,GeneID:1013745;Name=NP_687953.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=pyk;product=pyruvate kinase;protein_id=NP_687953.1;transl_table=11
NC_004116.1	RefSeq	gene	949476	950033	.	+	.	ID=gene1033;Dbxref=GeneID:1013746;Name=SAG0942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0942
NC_004116.1	RefSeq	CDS	949476	950033	.	+	0	ID=cds918;Parent=gene1033;Dbxref=Genbank:NP_687954.1,GeneID:1013746;Name=NP_687954.1;Note=identified by match to PFAM protein family HMM PF00461;gbkey=CDS;product=signal peptidase I;protein_id=NP_687954.1;transl_table=11
NC_004116.1	RefSeq	gene	950047	950190	.	-	.	ID=gene1034;Dbxref=GeneID:1013747;Name=SAG0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0943
NC_004116.1	RefSeq	CDS	950047	950190	.	-	0	ID=cds919;Parent=gene1034;Dbxref=Genbank:NP_687955.1,GeneID:1013747;Name=NP_687955.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687955.1;transl_table=11
NC_004116.1	RefSeq	gene	950302	952116	.	+	.	ID=gene1035;Dbxref=GeneID:1013748;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=SAG0944
NC_004116.1	RefSeq	CDS	950302	952116	.	+	0	ID=cds920;Parent=gene1035;Dbxref=Genbank:NP_687956.1,GeneID:1013748;Name=NP_687956.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;gene=glmS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=NP_687956.1;transl_table=11
NC_004116.1	RefSeq	gene	952293	953426	.	+	.	ID=gene1036;Dbxref=GeneID:1013749;Name=SAG0945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0945
NC_004116.1	RefSeq	CDS	952293	953426	.	+	0	ID=cds921;Parent=gene1036;Dbxref=Genbank:NP_687957.1,GeneID:1013749;Name=NP_687957.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1548 transposase;protein_id=NP_687957.1;transl_table=11
NC_004116.1	RefSeq	gene	953605	953934	.	+	.	ID=gene1037;Dbxref=GeneID:1013750;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=SAG0946
NC_004116.1	RefSeq	CDS	953605	953934	.	+	0	ID=cds922;Parent=gene1037;Dbxref=Genbank:NP_687958.1,GeneID:1013750;Name=NP_687958.1;Note=identified by match to TIGR protein family HMM TIGR00686;gbkey=CDS;gene=phnA;product=phnA protein;protein_id=NP_687958.1;transl_table=11
NC_004116.1	RefSeq	gene	954069	954710	.	+	.	ID=gene1038;Dbxref=GeneID:1013751;Name=SAG0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0947
NC_004116.1	RefSeq	CDS	954069	954710	.	+	0	ID=cds923;Parent=gene1038;Dbxref=Genbank:NP_687959.1,GeneID:1013751;Name=NP_687959.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_687959.1;transl_table=11
NC_004116.1	RefSeq	gene	954720	955349	.	+	.	ID=gene1039;Dbxref=GeneID:1013752;Name=SAG0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0948
NC_004116.1	RefSeq	CDS	954720	955349	.	+	0	ID=cds924;Parent=gene1039;Dbxref=Genbank:NP_687960.1,GeneID:1013752;Name=NP_687960.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_687960.1;transl_table=11
NC_004116.1	RefSeq	gene	955366	956196	.	+	.	ID=gene1040;Dbxref=GeneID:1013753;Name=SAG0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0949
NC_004116.1	RefSeq	CDS	955366	956196	.	+	0	ID=cds925;Parent=gene1040;Dbxref=Genbank:NP_687961.1,GeneID:1013753;Name=NP_687961.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter amino acid-binding protein;protein_id=NP_687961.1;transl_table=11
NC_004116.1	RefSeq	gene	956280	956513	.	-	.	ID=gene1041;Dbxref=GeneID:1013754;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SAG0950
NC_004116.1	RefSeq	CDS	956280	956513	.	-	0	ID=cds926;Parent=gene1041;Dbxref=Genbank:NP_687962.2,GeneID:1013754;Name=NP_687962.2;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=NP_687962.2;transl_table=11
NC_004116.1	RefSeq	gene	956582	957502	.	-	.	ID=gene1042;Dbxref=GeneID:1013755;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=SAG0951
NC_004116.1	RefSeq	CDS	956582	957502	.	-	0	ID=cds927;Parent=gene1042;Dbxref=Genbank:NP_687963.1,GeneID:1013755;Name=NP_687963.1;Note=catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=NP_687963.1;transl_table=11
NC_004116.1	RefSeq	gene	957608	958198	.	+	.	ID=gene1043;Dbxref=GeneID:1013756;Name=SAG0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0952
NC_004116.1	RefSeq	CDS	957608	958198	.	+	0	ID=cds928;Parent=gene1043;Dbxref=Genbank:NP_687964.1,GeneID:1013756;Name=NP_687964.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687964.1;transl_table=11
NC_004116.1	RefSeq	gene	958524	958913	.	+	.	ID=gene1044;Dbxref=GeneID:1013757;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=SAG0953
NC_004116.1	RefSeq	CDS	958524	958913	.	+	0	ID=cds929;Parent=gene1044;Dbxref=Genbank:NP_687965.1,GeneID:1013757;Name=NP_687965.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=NP_687965.1;transl_table=11
NC_004116.1	RefSeq	gene	958978	960027	.	+	.	ID=gene1045;Dbxref=GeneID:1013758;Name=SAG0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0954
NC_004116.1	RefSeq	CDS	958978	960027	.	+	0	ID=cds930;Parent=gene1045;Dbxref=Genbank:NP_687966.1,GeneID:1013758;Name=NP_687966.1;Note=identified by match to PFAM protein family HMM PF02608%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687966.1;transl_table=11
NC_004116.1	RefSeq	gene	960172	961707	.	+	.	ID=gene1046;Dbxref=GeneID:1013759;Name=SAG0955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0955
NC_004116.1	RefSeq	CDS	960172	961707	.	+	0	ID=cds931;Parent=gene1046;Dbxref=Genbank:NP_687967.1,GeneID:1013759;Name=NP_687967.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=NP_687967.1;transl_table=11
NC_004116.1	RefSeq	gene	961700	962761	.	+	.	ID=gene1047;Dbxref=GeneID:1013760;Name=SAG0956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0956
NC_004116.1	RefSeq	CDS	961700	962761	.	+	0	ID=cds932;Parent=gene1047;Dbxref=Genbank:NP_687968.1,GeneID:1013760;Name=NP_687968.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=NP_687968.1;transl_table=11
NC_004116.1	RefSeq	gene	962763	963719	.	+	.	ID=gene1048;Dbxref=GeneID:1013761;Name=SAG0957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0957
NC_004116.1	RefSeq	CDS	962763	963719	.	+	0	ID=cds933;Parent=gene1048;Dbxref=Genbank:NP_687969.1,GeneID:1013761;Name=NP_687969.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=NP_687969.1;transl_table=11
NC_004116.1	RefSeq	gene	963924	965294	.	+	.	ID=gene1049;Dbxref=GeneID:1013762;Name=nox-2;gbkey=Gene;gene=nox-2;gene_biotype=protein_coding;locus_tag=SAG0958
NC_004116.1	RefSeq	CDS	963924	965294	.	+	0	ID=cds934;Parent=gene1049;Dbxref=Genbank:NP_687970.1,GeneID:1013762;Name=NP_687970.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;gene=nox-2;product=NADH oxidase;protein_id=NP_687970.1;transl_table=11
NC_004116.1	RefSeq	gene	965415	966404	.	-	.	ID=gene1050;Dbxref=GeneID:1013763;Name=ldh;gbkey=Gene;gene=ldh;gene_biotype=protein_coding;locus_tag=SAG0959
NC_004116.1	RefSeq	CDS	965415	966404	.	-	0	ID=cds935;Parent=gene1050;Dbxref=Genbank:NP_687971.1,GeneID:1013763;Name=NP_687971.1;Note=Converts (S)-lactate and NAD(+) to pyruvate and NADH;gbkey=CDS;gene=ldh;product=L-lactate dehydrogenase;protein_id=NP_687971.1;transl_table=11
NC_004116.1	RefSeq	gene	966643	969102	.	+	.	ID=gene1051;Dbxref=GeneID:1013764;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=SAG0960
NC_004116.1	RefSeq	CDS	966643	969102	.	+	0	ID=cds936;Parent=gene1051;Dbxref=Genbank:NP_687972.1,GeneID:1013764;Name=NP_687972.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=NP_687972.1;transl_table=11
NC_004116.1	RefSeq	gene	969109	969852	.	+	.	ID=gene1052;Dbxref=GeneID:1013765;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=SAG0961
NC_004116.1	RefSeq	CDS	969109	969852	.	+	0	ID=cds937;Parent=gene1052;Dbxref=Genbank:NP_687973.1,GeneID:1013765;Name=NP_687973.1;Note=identified by match to TIGR protein family HMM TIGR01076;gbkey=CDS;gene=srtA;product=sortase SrtA;protein_id=NP_687973.1;transl_table=11
NC_004116.1	RefSeq	gene	969868	970281	.	+	.	ID=gene1053;Dbxref=GeneID:1013766;Name=SAG0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0962
NC_004116.1	RefSeq	CDS	969868	970281	.	+	0	ID=cds938;Parent=gene1053;Dbxref=Genbank:NP_687974.1,GeneID:1013766;Name=NP_687974.1;Note=identified by match to PFAM protein family HMM PF00903;gbkey=CDS;product=glyoxylase;protein_id=NP_687974.1;transl_table=11
NC_004116.1	RefSeq	gene	970434	971396	.	+	.	ID=gene1054;Dbxref=GeneID:1013767;Name=SAG0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0963
NC_004116.1	RefSeq	CDS	970434	971396	.	+	0	ID=cds939;Parent=gene1054;Dbxref=Genbank:NP_687975.1,GeneID:1013767;Name=NP_687975.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687975.1;transl_table=11
NC_004116.1	RefSeq	gene	971459	972586	.	-	.	ID=gene1055;Dbxref=GeneID:1013768;Name=SAG0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0964
NC_004116.1	RefSeq	CDS	971459	972586	.	-	0	ID=cds940;Parent=gene1055;Dbxref=Genbank:NP_687976.1,GeneID:1013768;Name=NP_687976.1;Note=identified by match to PFAM protein family HMM PF00999;gbkey=CDS;product=Na+/H+ exchanger family protein;protein_id=NP_687976.1;transl_table=11
NC_004116.1	RefSeq	gene	972846	973229	.	+	.	ID=gene1056;Dbxref=GeneID:1013769;Name=SAG0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0965
NC_004116.1	RefSeq	CDS	972846	973229	.	+	0	ID=cds941;Parent=gene1056;Dbxref=Genbank:NP_687977.1,GeneID:1013769;Name=NP_687977.1;Note=similar to OMNI:SP0537%3B identified by sequence similarity;gbkey=CDS;product=IS1381 transposase protein A;protein_id=NP_687977.1;transl_table=11
NC_004116.1	RefSeq	gene	973262	973651	.	+	.	ID=gene1057;Dbxref=GeneID:1013770;Name=SAG0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0966
NC_004116.1	RefSeq	CDS	973262	973651	.	+	0	ID=cds942;Parent=gene1057;Dbxref=Genbank:NP_687978.1,GeneID:1013770;Name=NP_687978.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1381 transposase protein B;protein_id=NP_687978.1;transl_table=11
NC_004116.1	RefSeq	gene	973717	975279	.	-	.	ID=gene1058;Dbxref=GeneID:1013771;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SAG0967
NC_004116.1	RefSeq	CDS	973717	975279	.	-	0	ID=cds943;Parent=gene1058;Dbxref=Genbank:NP_687979.1,GeneID:1013771;Name=NP_687979.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=NP_687979.1;transl_table=11
NC_004116.1	RefSeq	gene	975492	976190	.	+	.	ID=gene1059;Dbxref=GeneID:1013772;Name=SAG0968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0968
NC_004116.1	RefSeq	CDS	975492	976190	.	+	0	ID=cds944;Parent=gene1059;Dbxref=Genbank:NP_687980.1,GeneID:1013772;Name=NP_687980.1;Note=identified by match to PFAM protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_687980.1;transl_table=11
NC_004116.1	RefSeq	gene	976304	977638	.	+	.	ID=gene1060;Dbxref=GeneID:1013773;Name=gid;gbkey=Gene;gene=gid;gene_biotype=protein_coding;locus_tag=SAG0969
NC_004116.1	RefSeq	CDS	976304	977638	.	+	0	ID=cds945;Parent=gene1060;Dbxref=Genbank:NP_687981.1,GeneID:1013773;Name=NP_687981.1;Note=TrmFO%3B Gid%3B glucose-inhibited division protein%3B similar to GidA%3B the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant%3B modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine;gbkey=CDS;gene=gid;product=tRNA (uracil-5-)-methyltransferase Gid;protein_id=NP_687981.1;transl_table=11
NC_004116.1	RefSeq	gene	977716	978459	.	+	.	ID=gene1061;Dbxref=GeneID:1013774;Name=SAG0970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0970
NC_004116.1	RefSeq	CDS	977716	978459	.	+	0	ID=cds946;Parent=gene1061;Dbxref=Genbank:NP_687982.1,GeneID:1013774;Name=NP_687982.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_687982.1;transl_table=11
NC_004116.1	RefSeq	gene	978592	979440	.	+	.	ID=gene1062;Dbxref=GeneID:1013775;Name=SAG0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0971
NC_004116.1	RefSeq	CDS	978592	979440	.	+	0	ID=cds947;Parent=gene1062;Dbxref=Genbank:NP_687983.1,GeneID:1013775;Name=NP_687983.1;Note=identified by match to PFAM protein family HMM PF03180%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_687983.1;transl_table=11
NC_004116.1	RefSeq	gene	979472	979961	.	-	.	ID=gene1063;Dbxref=GeneID:1013776;Name=SAG0972;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG0972
NC_004116.1	RefSeq	gene	980127	981089	.	+	.	ID=gene1064;Dbxref=GeneID:1013777;Name=SAG0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0973
NC_004116.1	RefSeq	CDS	980127	981089	.	+	0	ID=cds948;Parent=gene1064;Dbxref=Genbank:NP_687984.1,GeneID:1013777;Name=NP_687984.1;gbkey=CDS;product=nisin-resistance protein;protein_id=NP_687984.1;transl_table=11
NC_004116.1	RefSeq	gene	981115	981867	.	+	.	ID=gene1065;Dbxref=GeneID:1013778;Name=SAG0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0974
NC_004116.1	RefSeq	CDS	981115	981867	.	+	0	ID=cds949;Parent=gene1065;Dbxref=Genbank:NP_687985.1,GeneID:1013778;Name=NP_687985.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_687985.1;transl_table=11
NC_004116.1	RefSeq	gene	981869	983824	.	+	.	ID=gene1066;Dbxref=GeneID:1013779;Name=SAG0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0975
NC_004116.1	RefSeq	CDS	981869	983824	.	+	0	ID=cds950;Parent=gene1066;Dbxref=Genbank:NP_687986.1,GeneID:1013779;Name=NP_687986.1;Note=similar to OMNI:NTL01LL1789%3B identified by sequence similarity;gbkey=CDS;product=ABC transporter permease;protein_id=NP_687986.1;transl_table=11
NC_004116.1	RefSeq	gene	983934	984602	.	+	.	ID=gene1067;Dbxref=GeneID:1013780;Name=SAG0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0976
NC_004116.1	RefSeq	CDS	983934	984602	.	+	0	ID=cds951;Parent=gene1067;Dbxref=Genbank:NP_687987.1,GeneID:1013780;Name=NP_687987.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_687987.1;transl_table=11
NC_004116.1	RefSeq	gene	984599	985537	.	+	.	ID=gene1068;Dbxref=GeneID:1013781;Name=SAG0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0977
NC_004116.1	RefSeq	CDS	984599	985537	.	+	0	ID=cds952;Parent=gene1068;Dbxref=Genbank:NP_687988.1,GeneID:1013781;Name=NP_687988.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_687988.1;transl_table=11
NC_004116.1	RefSeq	gene	985580	986650	.	-	.	ID=gene1069;Dbxref=GeneID:1013782;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=SAG0978
NC_004116.1	RefSeq	CDS	985580	986650	.	-	0	ID=cds953;Parent=gene1069;Dbxref=Genbank:NP_687989.1,GeneID:1013782;Name=NP_687989.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerS;gbkey=CDS;gene=xerS;product=site-specific tyrosine recombinase XerS;protein_id=NP_687989.1;transl_table=11
NC_004116.1	RefSeq	gene	987103	988764	.	+	.	ID=gene1070;Dbxref=GeneID:1013783;Name=SAG0979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0979
NC_004116.1	RefSeq	CDS	987103	988764	.	+	0	ID=cds954;Parent=gene1070;Dbxref=Genbank:NP_687990.1,GeneID:1013783;Name=NP_687990.1;Note=identified by match to PFAM protein family HMM PF00496;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=NP_687990.1;transl_table=11
NC_004116.1	RefSeq	gene	988797	989570	.	-	.	ID=gene1071;Dbxref=GeneID:1013784;Name=SAG0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0980
NC_004116.1	RefSeq	CDS	988797	989570	.	-	0	ID=cds955;Parent=gene1071;Dbxref=Genbank:NP_687991.1,GeneID:1013784;Name=NP_687991.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_687991.1;transl_table=11
NC_004116.1	RefSeq	gene	989560	990246	.	-	.	ID=gene1072;Dbxref=GeneID:1013785;Name=SAG0981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0981
NC_004116.1	RefSeq	CDS	989560	990246	.	-	0	ID=cds956;Parent=gene1072;Dbxref=Genbank:NP_687992.1,GeneID:1013785;Name=NP_687992.1;Note=similar to GP:11055964%3B identified by sequence similarity;gbkey=CDS;product=satD protein;protein_id=NP_687992.1;transl_table=11
NC_004116.1	RefSeq	gene	990313	991878	.	-	.	ID=gene1073;Dbxref=GeneID:1013786;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=SAG0982
NC_004116.1	RefSeq	CDS	990313	991878	.	-	0	ID=cds957;Parent=gene1073;Dbxref=Genbank:NP_687993.1,GeneID:1013786;Name=NP_687993.1;Note=identified by match to PFAM protein family HMM PF00448;gbkey=CDS;gene=ffh;product=signal recognition particle protein Ffh;protein_id=NP_687993.1;transl_table=11
NC_004116.1	RefSeq	gene	991896	992228	.	-	.	ID=gene1074;Dbxref=GeneID:1013787;Name=SAG0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0983
NC_004116.1	RefSeq	CDS	991896	992228	.	-	0	ID=cds958;Parent=gene1074;Dbxref=Genbank:NP_687994.1,GeneID:1013787;Name=NP_687994.1;gbkey=CDS;product=DNA-binding protein;protein_id=NP_687994.1;transl_table=11
NC_004116.1	RefSeq	gene	992317	993630	.	-	.	ID=gene1075;Dbxref=GeneID:1013788;Name=SAG0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0984
NC_004116.1	RefSeq	CDS	992317	993630	.	-	0	ID=cds959;Parent=gene1075;Dbxref=Genbank:NP_687995.1,GeneID:1013788;Name=NP_687995.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase CiaH;protein_id=NP_687995.1;transl_table=11
NC_004116.1	RefSeq	gene	993614	994294	.	-	.	ID=gene1076;Dbxref=GeneID:1013789;Name=ciaR;gbkey=Gene;gene=ciaR;gene_biotype=protein_coding;locus_tag=SAG0985
NC_004116.1	RefSeq	CDS	993614	994294	.	-	0	ID=cds960;Parent=gene1076;Dbxref=Genbank:NP_687996.1,GeneID:1013789;Name=NP_687996.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;gene=ciaR;product=DNA-binding response regulator CiaR;protein_id=NP_687996.1;transl_table=11
NC_004116.1	RefSeq	gene	994456	997005	.	-	.	ID=gene1077;Dbxref=GeneID:1013790;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SAG0986
NC_004116.1	RefSeq	CDS	994456	997005	.	-	0	ID=cds961;Parent=gene1077;Dbxref=Genbank:NP_687997.1,GeneID:1013790;Name=NP_687997.1;Note=identified by match to PFAM protein family HMM PF01433;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=NP_687997.1;transl_table=11
NC_004116.1	RefSeq	gene	997151	997804	.	-	.	ID=gene1078;Dbxref=GeneID:1013791;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=SAG0987
NC_004116.1	RefSeq	CDS	997151	997804	.	-	0	ID=cds962;Parent=gene1078;Dbxref=Genbank:NP_687998.1,GeneID:1013791;Name=NP_687998.1;Note=identified by match to PFAM protein family HMM PF01895;gbkey=CDS;gene=phoU;product=phosphate transport system regulatory protein PhoU;protein_id=NP_687998.1;transl_table=11
NC_004116.1	RefSeq	gene	997838	998596	.	-	.	ID=gene1079;Dbxref=GeneID:1013792;Name=SAG0988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0988
NC_004116.1	RefSeq	CDS	997838	998596	.	-	0	ID=cds963;Parent=gene1079;Dbxref=Genbank:NP_687999.1,GeneID:1013792;Name=NP_687999.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;product=phosphate transporter ATP-binding protein;protein_id=NP_687999.1;transl_table=11
NC_004116.1	RefSeq	gene	998608	999411	.	-	.	ID=gene1080;Dbxref=GeneID:1013793;Name=SAG0989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0989
NC_004116.1	RefSeq	CDS	998608	999411	.	-	0	ID=cds964;Parent=gene1080;Dbxref=Genbank:NP_688000.1,GeneID:1013793;Name=NP_688000.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;product=phosphate transporter ATP-binding protein;protein_id=NP_688000.1;transl_table=11
NC_004116.1	RefSeq	gene	999423	1000310	.	-	.	ID=gene1081;Dbxref=GeneID:1013794;Name=SAG0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0990
NC_004116.1	RefSeq	CDS	999423	1000310	.	-	0	ID=cds965;Parent=gene1081;Dbxref=Genbank:NP_688001.1,GeneID:1013794;Name=NP_688001.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=NP_688001.1;transl_table=11
NC_004116.1	RefSeq	gene	1000300	1001217	.	-	.	ID=gene1082;Dbxref=GeneID:1013795;Name=SAG0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0991
NC_004116.1	RefSeq	CDS	1000300	1001217	.	-	0	ID=cds966;Parent=gene1082;Dbxref=Genbank:NP_688002.1,GeneID:1013795;Name=NP_688002.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=NP_688002.1;transl_table=11
NC_004116.1	RefSeq	gene	1001263	1002123	.	-	.	ID=gene1083;Dbxref=GeneID:1013796;Name=SAG0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0992
NC_004116.1	RefSeq	CDS	1001263	1002123	.	-	0	ID=cds967;Parent=gene1083;Dbxref=Genbank:NP_688003.1,GeneID:1013796;Name=NP_688003.1;Note=identified by match to PFAM protein family HMM PF01449;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=NP_688003.1;transl_table=11
NC_004116.1	RefSeq	gene	1002308	1003618	.	-	.	ID=gene1084;Dbxref=GeneID:1013797;Name=SAG0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0993
NC_004116.1	RefSeq	CDS	1002308	1003618	.	-	0	ID=cds968;Parent=gene1084;Dbxref=Genbank:NP_688004.1,GeneID:1013797;Name=NP_688004.1;Note=identified by match to PFAM protein family HMM PF01189;gbkey=CDS;product=NOL1/NOP2/sun family protein;protein_id=NP_688004.1;transl_table=11
NC_004116.1	RefSeq	gene	1003686	1004450	.	-	.	ID=gene1085;Dbxref=GeneID:1013798;Name=SAG0994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0994
NC_004116.1	RefSeq	CDS	1003686	1004450	.	-	0	ID=cds969;Parent=gene1085;Dbxref=Genbank:NP_688005.1,GeneID:1013798;Name=NP_688005.1;Note=identified by match to PFAM protein family HMM PF00459;gbkey=CDS;product=inositol monophosphatase;protein_id=NP_688005.1;transl_table=11
NC_004116.1	RefSeq	gene	1004440	1004721	.	-	.	ID=gene1086;Dbxref=GeneID:1013799;Name=SAG0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0995
NC_004116.1	RefSeq	CDS	1004440	1004721	.	-	0	ID=cds970;Parent=gene1086;Dbxref=Genbank:NP_688006.1,GeneID:1013799;Name=NP_688006.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688006.1;transl_table=11
NC_004116.1	RefSeq	gene	1004714	1005127	.	-	.	ID=gene1087;Dbxref=GeneID:1013800;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;gene_synonym=yjbD;locus_tag=SAG0996
NC_004116.1	RefSeq	CDS	1004714	1005127	.	-	0	ID=cds971;Parent=gene1087;Dbxref=Genbank:NP_688007.1,GeneID:1013800;Name=NP_688007.1;Note=the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters%3B in Bacillus subtilis this protein is a substrate for ClpXP protease%3B blocks transcription of the competence regulatory gene encoded by the srf operon%3B regulates a number of genes involved in thiol homeostasis including trxA and trxB%3B monomeric member of ArsC family of proteins%3B does not bind DNA%3B contains a disulfide bond between C10 and C13 which may sense disulfide stress;gbkey=CDS;gene=spxA;product=Spx family transcriptional regulator;protein_id=NP_688007.1;transl_table=11
NC_004116.1	RefSeq	gene	1005170	1006102	.	-	.	ID=gene1088;Dbxref=GeneID:1013801;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;gene_synonym=ribC,ribF;locus_tag=SAG0997
NC_004116.1	RefSeq	CDS	1005170	1006102	.	-	0	ID=cds972;Parent=gene1088;Dbxref=Genbank:NP_688008.1,GeneID:1013801;Name=NP_688008.1;Note=catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities;gbkey=CDS;gene=ribC;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=NP_688008.1;transl_table=11
NC_004116.1	RefSeq	gene	1006115	1006999	.	-	.	ID=gene1089;Dbxref=GeneID:1013802;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SAG0998
NC_004116.1	RefSeq	CDS	1006115	1006999	.	-	0	ID=cds973;Parent=gene1089;Dbxref=Genbank:NP_688009.1,GeneID:1013802;Name=NP_688009.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=NP_688009.1;transl_table=11
NC_004116.1	RefSeq	gene	1007091	1007522	.	-	.	ID=gene1090;Dbxref=GeneID:1013803;Name=SAG0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG0999
NC_004116.1	RefSeq	CDS	1007091	1007522	.	-	0	ID=cds974;Parent=gene1090;Dbxref=Genbank:NP_688010.1,GeneID:1013803;Name=NP_688010.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688010.1;transl_table=11
NC_004116.1	RefSeq	gene	1007535	1008806	.	-	.	ID=gene1091;Dbxref=GeneID:1013804;Name=SAG1000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1000
NC_004116.1	RefSeq	CDS	1007535	1008806	.	-	0	ID=cds975;Parent=gene1091;Dbxref=Genbank:NP_688011.1,GeneID:1013804;Name=NP_688011.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688011.1;transl_table=11
NC_004116.1	RefSeq	gene	1008840	1009430	.	-	.	ID=gene1092;Dbxref=GeneID:1013805;Name=SAG1001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1001
NC_004116.1	RefSeq	CDS	1008840	1009430	.	-	0	ID=cds976;Parent=gene1092;Dbxref=Genbank:NP_688012.1,GeneID:1013805;Name=NP_688012.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688012.1;transl_table=11
NC_004116.1	RefSeq	gene	1009537	1010415	.	-	.	ID=gene1093;Dbxref=GeneID:1013806;Name=SAG1002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1002
NC_004116.1	RefSeq	CDS	1009537	1010415	.	-	0	ID=cds977;Parent=gene1093;Dbxref=Genbank:NP_688013.1,GeneID:1013806;Name=NP_688013.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=protease;protein_id=NP_688013.1;transl_table=11
NC_004116.1	RefSeq	gene	1010521	1013151	.	-	.	ID=gene1094;Dbxref=GeneID:1013807;Name=SAG1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1003
NC_004116.1	RefSeq	CDS	1010521	1013151	.	-	0	ID=cds978;Parent=gene1094;Dbxref=Genbank:NP_688014.1,GeneID:1013807;Name=NP_688014.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;product=permease;protein_id=NP_688014.1;transl_table=11
NC_004116.1	RefSeq	gene	1013163	1013864	.	-	.	ID=gene1095;Dbxref=GeneID:1013808;Name=SAG1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1004
NC_004116.1	RefSeq	CDS	1013163	1013864	.	-	0	ID=cds979;Parent=gene1095;Dbxref=Genbank:NP_688015.1,GeneID:1013808;Name=NP_688015.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688015.1;transl_table=11
NC_004116.1	RefSeq	gene	1014001	1016121	.	-	.	ID=gene1096;Dbxref=GeneID:1013809;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=SAG1005
NC_004116.1	RefSeq	CDS	1014001	1016121	.	-	0	ID=cds980;Parent=gene1096;Dbxref=Genbank:NP_688016.1,GeneID:1013809;Name=NP_688016.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;gene=topA;product=DNA topoisomerase I;protein_id=NP_688016.1;transl_table=11
NC_004116.1	RefSeq	gene	1016216	1017058	.	-	.	ID=gene1097;Dbxref=GeneID:1013810;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=SAG1006
NC_004116.1	RefSeq	CDS	1016216	1017058	.	-	0	ID=cds981;Parent=gene1097;Dbxref=Genbank:NP_688017.1,GeneID:1013810;Name=NP_688017.1;Note=identified by match to PFAM protein family HMM PF02481;gbkey=CDS;gene=dprA;product=DprA/SMF protein DNA processing factor;protein_id=NP_688017.1;transl_table=11
NC_004116.1	RefSeq	gene	1017196	1018224	.	-	.	ID=gene1098;Dbxref=GeneID:1013811;Name=SAG1007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1007
NC_004116.1	RefSeq	CDS	1017196	1018224	.	-	0	ID=cds982;Parent=gene1098;Dbxref=Genbank:NP_688018.1,GeneID:1013811;Name=NP_688018.1;Note=identified by match to PFAM protein family HMM PF01497;gbkey=CDS;product=iron-compound ABC transporter iron-compound-binding protein;protein_id=NP_688018.1;transl_table=11
NC_004116.1	RefSeq	gene	1018286	1019047	.	-	.	ID=gene1099;Dbxref=GeneID:1013812;Name=SAG1008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1008
NC_004116.1	RefSeq	CDS	1018286	1019047	.	-	0	ID=cds983;Parent=gene1099;Dbxref=Genbank:NP_688019.1,GeneID:1013812;Name=NP_688019.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=NP_688019.1;transl_table=11
NC_004116.1	RefSeq	gene	1019044	1020018	.	-	.	ID=gene1100;Dbxref=GeneID:1013813;Name=SAG1009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1009
NC_004116.1	RefSeq	CDS	1019044	1020018	.	-	0	ID=cds984;Parent=gene1100;Dbxref=Genbank:NP_688020.1,GeneID:1013813;Name=NP_688020.1;Note=identified by match to PFAM protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=NP_688020.1;transl_table=11
NC_004116.1	RefSeq	gene	1020015	1020977	.	-	.	ID=gene1101;Dbxref=GeneID:1013814;Name=SAG1010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1010
NC_004116.1	RefSeq	CDS	1020015	1020977	.	-	0	ID=cds985;Parent=gene1101;Dbxref=Genbank:NP_688021.1,GeneID:1013814;Name=NP_688021.1;Note=identified by match to PFAM protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=NP_688021.1;transl_table=11
NC_004116.1	RefSeq	gene	1021216	1021764	.	-	.	ID=gene1102;Dbxref=GeneID:1013815;Name=SAG1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1011
NC_004116.1	RefSeq	CDS	1021216	1021764	.	-	0	ID=cds986;Parent=gene1102;Dbxref=Genbank:NP_688022.1,GeneID:1013815;Name=NP_688022.1;Note=identified by match to PFAM protein family HMM PF00132;gbkey=CDS;product=acetyltransferase;protein_id=NP_688022.1;transl_table=11
NC_004116.1	RefSeq	gene	1021785	1022546	.	-	.	ID=gene1103;Dbxref=GeneID:1013816;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SAG1012
NC_004116.1	RefSeq	CDS	1021785	1022546	.	-	0	ID=cds987;Parent=gene1103;Dbxref=Genbank:NP_688023.1,GeneID:1013816;Name=NP_688023.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=NP_688023.1;transl_table=11
NC_004116.1	RefSeq	gene	1022533	1023384	.	-	.	ID=gene1104;Dbxref=GeneID:1013817;Name=rbgA;gbkey=Gene;gene=rbgA;gene_biotype=protein_coding;gene_synonym=ylqF;locus_tag=SAG1013
NC_004116.1	RefSeq	CDS	1022533	1023384	.	-	0	ID=cds988;Parent=gene1104;Dbxref=Genbank:NP_688024.1,GeneID:1013817;Name=NP_688024.1;Note=essential GTPase%3B functions in ribosome assembly%3B binds a unique part of the 23S rRNA%3B interacts with ribosomal protein L25(Ctc);gbkey=CDS;gene=rbgA;product=ribosomal biogenesis GTPase;protein_id=NP_688024.1;transl_table=11
NC_004116.1	RefSeq	gene	1023660	1024232	.	-	.	ID=gene1105;Dbxref=GeneID:1013818;Name=SAG1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1014
NC_004116.1	RefSeq	CDS	1023660	1024232	.	-	0	ID=cds989;Parent=gene1105;Dbxref=Genbank:NP_688025.1,GeneID:1013818;Name=NP_688025.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688025.1;transl_table=11
NC_004116.1	RefSeq	gene	1024433	1025917	.	-	.	ID=gene1106;Dbxref=GeneID:1013819;Name=SAG1015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1015
NC_004116.1	RefSeq	CDS	1024433	1025917	.	-	0	ID=cds990;Parent=gene1106;Dbxref=Genbank:NP_688026.1,GeneID:1013819;Name=NP_688026.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=NP_688026.1;transl_table=11
NC_004116.1	RefSeq	gene	1026073	1026807	.	-	.	ID=gene1107;Dbxref=GeneID:1013820;Name=SAG1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1016
NC_004116.1	RefSeq	CDS	1026073	1026807	.	-	0	ID=cds991;Parent=gene1107;Dbxref=Genbank:NP_688027.1,GeneID:1013820;Name=NP_688027.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=response regulator;protein_id=NP_688027.1;transl_table=11
NC_004116.1	RefSeq	gene	1026819	1028558	.	-	.	ID=gene1108;Dbxref=GeneID:1013821;Name=SAG1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1017
NC_004116.1	RefSeq	CDS	1026819	1028558	.	-	0	ID=cds992;Parent=gene1108;Dbxref=Genbank:NP_688028.1,GeneID:1013821;Name=NP_688028.1;Note=identified by match to PFAM protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_688028.1;transl_table=11
NC_004116.1	RefSeq	gene	1029094	1029216	.	-	.	ID=gene1109;Dbxref=GeneID:1013822;Name=SAG1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1018
NC_004116.1	RefSeq	CDS	1029094	1029216	.	-	0	ID=cds993;Parent=gene1109;Dbxref=Genbank:NP_688029.1,GeneID:1013822;Name=NP_688029.1;gbkey=CDS;product=lipoprotein;protein_id=NP_688029.1;transl_table=11
NC_004116.1	RefSeq	gene	1029739	1029858	.	-	.	ID=gene1110;Dbxref=GeneID:1013823;Name=SAG1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1019
NC_004116.1	RefSeq	CDS	1029739	1029858	.	-	0	ID=cds994;Parent=gene1110;Dbxref=Genbank:NP_688030.1,GeneID:1013823;Name=NP_688030.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688030.1;transl_table=11
NC_004116.1	RefSeq	gene	1030102	1030785	.	-	.	ID=gene1111;Dbxref=GeneID:1013824;Name=SAG1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1020
NC_004116.1	RefSeq	CDS	1030102	1030785	.	-	0	ID=cds995;Parent=gene1111;Dbxref=Genbank:NP_688031.1,GeneID:1013824;Name=NP_688031.1;gbkey=CDS;product=lipoprotein;protein_id=NP_688031.1;transl_table=11
NC_004116.1	RefSeq	gene	1030871	1031194	.	-	.	ID=gene1112;Dbxref=GeneID:1013825;Name=SAG1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1021
NC_004116.1	RefSeq	CDS	1030871	1031194	.	-	0	ID=cds996;Parent=gene1112;Dbxref=Genbank:NP_688032.1,GeneID:1013825;Name=NP_688032.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688032.1;transl_table=11
NC_004116.1	RefSeq	gene	1031542	1032075	.	-	.	ID=gene1113;Dbxref=GeneID:1013826;Name=SAG1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1022
NC_004116.1	RefSeq	CDS	1031542	1032075	.	-	0	ID=cds997;Parent=gene1113;Dbxref=Genbank:NP_688033.1,GeneID:1013826;Name=NP_688033.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688033.1;transl_table=11
NC_004116.1	RefSeq	gene	1032087	1032233	.	-	.	ID=gene1114;Dbxref=GeneID:1013827;Name=SAG1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1023
NC_004116.1	RefSeq	CDS	1032087	1032233	.	-	0	ID=cds998;Parent=gene1114;Dbxref=Genbank:NP_688034.1,GeneID:1013827;Name=NP_688034.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688034.1;transl_table=11
NC_004116.1	RefSeq	gene	1032230	1032781	.	-	.	ID=gene1115;Dbxref=GeneID:1013828;Name=SAG1024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1024
NC_004116.1	RefSeq	CDS	1032230	1032781	.	-	0	ID=cds999;Parent=gene1115;Dbxref=Genbank:NP_688035.1,GeneID:1013828;Name=NP_688035.1;gbkey=CDS;product=lipoprotein;protein_id=NP_688035.1;transl_table=11
NC_004116.1	RefSeq	gene	1032786	1033235	.	-	.	ID=gene1116;Dbxref=GeneID:1013829;Name=SAG1025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1025
NC_004116.1	RefSeq	CDS	1032786	1033235	.	-	0	ID=cds1000;Parent=gene1116;Dbxref=Genbank:NP_688036.1,GeneID:1013829;Name=NP_688036.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688036.1;transl_table=11
NC_004116.1	RefSeq	gene	1033630	1035126	.	-	.	ID=gene1117;Dbxref=GeneID:1013830;Name=SAG1026;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:1399011%3B identified by sequence similarity%3B immunogenic secreted protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG1026
NC_004116.1	RefSeq	gene	1035253	1035507	.	-	.	ID=gene1118;Dbxref=GeneID:1013831;Name=SAG1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1027
NC_004116.1	RefSeq	CDS	1035253	1035507	.	-	0	ID=cds1001;Parent=gene1118;Dbxref=Genbank:NP_688037.1,GeneID:1013831;Name=NP_688037.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688037.1;transl_table=11
NC_004116.1	RefSeq	gene	1035528	1036118	.	-	.	ID=gene1119;Dbxref=GeneID:1013832;Name=SAG1028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1028
NC_004116.1	RefSeq	CDS	1035528	1036118	.	-	0	ID=cds1002;Parent=gene1119;Dbxref=Genbank:NP_688038.1,GeneID:1013832;Name=NP_688038.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688038.1;transl_table=11
NC_004116.1	RefSeq	gene	1036132	1036437	.	-	.	ID=gene1120;Dbxref=GeneID:1013833;Name=SAG1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1029
NC_004116.1	RefSeq	CDS	1036132	1036437	.	-	0	ID=cds1003;Parent=gene1120;Dbxref=Genbank:NP_688039.1,GeneID:1013833;Name=NP_688039.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688039.1;transl_table=11
NC_004116.1	RefSeq	gene	1036566	1037480	.	-	.	ID=gene1121;Dbxref=GeneID:1013834;Name=SAG1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1030
NC_004116.1	RefSeq	CDS	1036566	1037480	.	-	0	ID=cds1004;Parent=gene1121;Dbxref=Genbank:NP_688040.1,GeneID:1013834;Name=NP_688040.1;Note=similar to OMNI:SA0643%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688040.1;transl_table=11
NC_004116.1	RefSeq	gene	1037483	1037845	.	-	.	ID=gene1122;Dbxref=GeneID:1013835;Name=SAG1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1031
NC_004116.1	RefSeq	CDS	1037483	1037845	.	-	0	ID=cds1005;Parent=gene1122;Dbxref=Genbank:NP_688041.1,GeneID:1013835;Name=NP_688041.1;Note=similar to GB:L13925 PID:466482%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688041.1;transl_table=11
NC_004116.1	RefSeq	gene	1037950	1038207	.	-	.	ID=gene1123;Dbxref=GeneID:1013836;Name=SAG1032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1032
NC_004116.1	RefSeq	CDS	1037950	1038207	.	-	0	ID=cds1006;Parent=gene1123;Dbxref=Genbank:NP_688042.1,GeneID:1013836;Name=NP_688042.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688042.1;transl_table=11
NC_004116.1	RefSeq	gene	1038221	1042150	.	-	.	ID=gene1124;Dbxref=GeneID:1013837;Name=SAG1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1033
NC_004116.1	RefSeq	CDS	1038221	1042150	.	-	0	ID=cds1007;Parent=gene1124;Dbxref=Genbank:NP_688043.1,GeneID:1013837;Name=NP_688043.1;Note=identified by match to PFAM protein family HMM PF01580;gbkey=CDS;product=DNA translocase FtsK;protein_id=NP_688043.1;transl_table=11
NC_004116.1	RefSeq	gene	1042461	1042628	.	-	.	ID=gene1125;Dbxref=GeneID:1013838;Name=SAG1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1034
NC_004116.1	RefSeq	CDS	1042461	1042628	.	-	0	ID=cds1008;Parent=gene1125;Dbxref=Genbank:NP_688044.1,GeneID:1013838;Name=NP_688044.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688044.1;transl_table=11
NC_004116.1	RefSeq	gene	1042635	1043909	.	-	.	ID=gene1126;Dbxref=GeneID:1013839;Name=SAG1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1035
NC_004116.1	RefSeq	CDS	1042635	1043909	.	-	0	ID=cds1009;Parent=gene1126;Dbxref=Genbank:NP_688045.1,GeneID:1013839;Name=NP_688045.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688045.1;transl_table=11
NC_004116.1	RefSeq	gene	1043909	1044151	.	-	.	ID=gene1127;Dbxref=GeneID:1013840;Name=SAG1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1036
NC_004116.1	RefSeq	CDS	1043909	1044151	.	-	0	ID=cds1010;Parent=gene1127;Dbxref=Genbank:NP_688046.1,GeneID:1013840;Name=NP_688046.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688046.1;transl_table=11
NC_004116.1	RefSeq	gene	1044135	1044608	.	-	.	ID=gene1128;Dbxref=GeneID:1013841;Name=SAG1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1037
NC_004116.1	RefSeq	CDS	1044135	1044608	.	-	0	ID=cds1011;Parent=gene1128;Dbxref=Genbank:NP_688047.1,GeneID:1013841;Name=NP_688047.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688047.1;transl_table=11
NC_004116.1	RefSeq	gene	1044617	1047628	.	-	.	ID=gene1129;Dbxref=GeneID:1013842;Name=SAG1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1038
NC_004116.1	RefSeq	CDS	1044617	1047628	.	-	0	ID=cds1012;Parent=gene1129;Dbxref=Genbank:NP_688048.1,GeneID:1013842;Name=NP_688048.1;gbkey=CDS;product=phage infection protein;protein_id=NP_688048.1;transl_table=11
NC_004116.1	RefSeq	gene	1047710	1048000	.	-	.	ID=gene1130;Dbxref=GeneID:1013843;Name=SAG1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1039
NC_004116.1	RefSeq	CDS	1047710	1048000	.	-	0	ID=cds1013;Parent=gene1130;Dbxref=Genbank:NP_688049.1,GeneID:1013843;Name=NP_688049.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688049.1;transl_table=11
NC_004116.1	RefSeq	gene	1048117	1048899	.	-	.	ID=gene1131;Dbxref=GeneID:1013844;Name=SAG1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1040
NC_004116.1	RefSeq	CDS	1048117	1048899	.	-	0	ID=cds1014;Parent=gene1131;Dbxref=Genbank:NP_688050.1,GeneID:1013844;Name=NP_688050.1;Note=similar to GP:14588952%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688050.1;transl_table=11
NC_004116.1	RefSeq	gene	1048896	1049219	.	-	.	ID=gene1132;Dbxref=GeneID:1013845;Name=SAG1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1041
NC_004116.1	RefSeq	CDS	1048896	1049219	.	-	0	ID=cds1015;Parent=gene1132;Dbxref=Genbank:NP_688051.1,GeneID:1013845;Name=NP_688051.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688051.1;transl_table=11
NC_004116.1	RefSeq	gene	1049346	1052528	.	-	.	ID=gene1133;Dbxref=GeneID:1013846;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SAG1042
NC_004116.1	RefSeq	CDS	1049346	1052528	.	-	0	ID=cds1016;Parent=gene1133;Dbxref=Genbank:NP_688052.1,GeneID:1013846;Name=NP_688052.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=NP_688052.1;transl_table=11
NC_004116.1	RefSeq	gene	1052559	1053635	.	-	.	ID=gene1134;Dbxref=GeneID:1013847;Name=carA-1;gbkey=Gene;gene=carA-1;gene_biotype=protein_coding;locus_tag=SAG1043
NC_004116.1	RefSeq	CDS	1052559	1053635	.	-	0	ID=cds1017;Parent=gene1134;Dbxref=Genbank:NP_688053.1,GeneID:1013847;Name=NP_688053.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;gene=carA-1;product=carbamoyl phosphate synthase small subunit;protein_id=NP_688053.1;transl_table=11
NC_004116.1	RefSeq	gene	1053649	1054572	.	-	.	ID=gene1135;Dbxref=GeneID:1013848;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=SAG1044
NC_004116.1	RefSeq	CDS	1053649	1054572	.	-	0	ID=cds1018;Parent=gene1135;Dbxref=Genbank:NP_688054.1,GeneID:1013848;Name=NP_688054.1;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase;protein_id=NP_688054.1;transl_table=11
NC_004116.1	RefSeq	gene	1054737	1056029	.	-	.	ID=gene1136;Dbxref=GeneID:1013849;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=SAG1045
NC_004116.1	RefSeq	CDS	1054737	1056029	.	-	0	ID=cds1019;Parent=gene1136;Dbxref=Genbank:NP_688055.1,GeneID:1013849;Name=NP_688055.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrC;product=dihydroorotase;protein_id=NP_688055.1;transl_table=11
NC_004116.1	RefSeq	gene	1056041	1056670	.	-	.	ID=gene1137;Dbxref=GeneID:1013850;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SAG1046
NC_004116.1	RefSeq	CDS	1056041	1056670	.	-	0	ID=cds1020;Parent=gene1137;Dbxref=Genbank:NP_688056.1,GeneID:1013850;Name=NP_688056.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=NP_688056.1;transl_table=11
NC_004116.1	RefSeq	gene	1056683	1057384	.	-	.	ID=gene1138;Dbxref=GeneID:1013851;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=SAG1047
NC_004116.1	RefSeq	CDS	1056683	1057384	.	-	0	ID=cds1021;Parent=gene1138;Dbxref=Genbank:NP_688057.1,GeneID:1013851;Name=NP_688057.1;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=NP_688057.1;transl_table=11
NC_004116.1	RefSeq	gene	1057597	1058829	.	-	.	ID=gene1139;Dbxref=GeneID:1013852;Name=SAG1048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1048
NC_004116.1	RefSeq	CDS	1057597	1058829	.	-	0	ID=cds1022;Parent=gene1139;Dbxref=Genbank:NP_688058.1,GeneID:1013852;Name=NP_688058.1;Note=similar to OMNI:NTL01CA2266%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688058.1;transl_table=11
NC_004116.1	RefSeq	gene	1058869	1060410	.	-	.	ID=gene1140;Dbxref=GeneID:1013853;Name=SAG1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1049
NC_004116.1	RefSeq	CDS	1058869	1060410	.	-	0	ID=cds1023;Parent=gene1140;Dbxref=Genbank:NP_688059.1,GeneID:1013853;Name=NP_688059.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688059.1;transl_table=11
NC_004116.1	RefSeq	gene	1060541	1060879	.	-	.	ID=gene1141;Dbxref=GeneID:1013854;Name=SAG1050;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GP:4098081%3B identified by sequence similarity%3B ribonucleotide reductase%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1050
NC_004116.1	RefSeq	gene	1061049	1062125	.	-	.	ID=gene1142;Dbxref=GeneID:1013855;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=SAG1051
NC_004116.1	RefSeq	CDS	1061049	1062125	.	-	0	ID=cds1024;Parent=gene1142;Dbxref=Genbank:NP_688060.1,GeneID:1013855;Name=NP_688060.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;gene=asd;product=aspartate-semialdehyde dehydrogenase;protein_id=NP_688060.1;transl_table=11
NC_004116.1	RefSeq	gene	1062335	1062478	.	-	.	ID=gene1143;Dbxref=GeneID:1013856;Name=SAG1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1052
NC_004116.1	RefSeq	CDS	1062335	1062478	.	-	0	ID=cds1025;Parent=gene1143;Dbxref=Genbank:NP_688061.1,GeneID:1013856;Name=NP_688061.1;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688061.1;transl_table=11
NC_004116.1	RefSeq	gene	1063089	1063181	.	+	.	ID=gene1144;Dbxref=GeneID:1013857;Name=SAG1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1053
NC_004116.1	RefSeq	CDS	1063089	1063181	.	+	0	ID=cds1026;Parent=gene1144;Dbxref=Genbank:NP_688062.1,GeneID:1013857;Name=NP_688062.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688062.1;transl_table=11
NC_004116.1	RefSeq	gene	1063395	1064870	.	-	.	ID=gene1145;Dbxref=GeneID:1013858;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=SAG1054
NC_004116.1	RefSeq	CDS	1063395	1064870	.	-	0	ID=cds1027;Parent=gene1145;Dbxref=Genbank:NP_688063.2,GeneID:1013858;Name=NP_688063.2;Note=identified by match to PFAM protein family HMM PF00614;gbkey=CDS;gene=cls;product=cardiolipin synthetase;protein_id=NP_688063.2;transl_table=11
NC_004116.1	RefSeq	gene	1065109	1066779	.	-	.	ID=gene1146;Dbxref=GeneID:1013859;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=SAG1055
NC_004116.1	RefSeq	CDS	1065109	1066779	.	-	0	ID=cds1028;Parent=gene1146;Dbxref=Genbank:NP_688064.1,GeneID:1013859;Name=NP_688064.1;Note=catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate;gbkey=CDS;gene=fhs;product=formate--tetrahydrofolate ligase;protein_id=NP_688064.1;transl_table=11
NC_004116.1	RefSeq	gene	1066868	1067887	.	-	.	ID=gene1147;Dbxref=GeneID:1013860;Name=lplA-2;gbkey=Gene;gene=lplA-2;gene_biotype=protein_coding;locus_tag=SAG1056
NC_004116.1	RefSeq	CDS	1066868	1067887	.	-	0	ID=cds1029;Parent=gene1147;Dbxref=Genbank:NP_688065.1,GeneID:1013860;Name=NP_688065.1;Note=identified by match to PFAM protein family HMM PF02539;gbkey=CDS;gene=lplA-2;product=lipoate-protein ligase A;protein_id=NP_688065.1;transl_table=11
NC_004116.1	RefSeq	gene	1067914	1068792	.	-	.	ID=gene1148;Dbxref=GeneID:1013861;Name=SAG1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1057
NC_004116.1	RefSeq	CDS	1067914	1068792	.	-	0	ID=cds1030;Parent=gene1148;Dbxref=Genbank:NP_688066.1,GeneID:1013861;Name=NP_688066.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688066.1;transl_table=11
NC_004116.1	RefSeq	gene	1068761	1069579	.	-	.	ID=gene1149;Dbxref=GeneID:1013862;Name=SAG1058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1058
NC_004116.1	RefSeq	CDS	1068761	1069579	.	-	0	ID=cds1031;Parent=gene1149;Dbxref=Genbank:NP_688067.1,GeneID:1013862;Name=NP_688067.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688067.1;transl_table=11
NC_004116.1	RefSeq	gene	1069572	1069904	.	-	.	ID=gene1150;Dbxref=GeneID:1013863;Name=SAG1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1059
NC_004116.1	RefSeq	CDS	1069572	1069904	.	-	0	ID=cds1032;Parent=gene1150;Dbxref=Genbank:NP_688068.1,GeneID:1013863;Name=NP_688068.1;Note=identified by match to PFAM protein family HMM PF01597;gbkey=CDS;product=glycine cleavage system H protein;protein_id=NP_688068.1;transl_table=11
NC_004116.1	RefSeq	gene	1069933	1070919	.	-	.	ID=gene1151;Dbxref=GeneID:1013864;Name=SAG1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1060
NC_004116.1	RefSeq	CDS	1069933	1070919	.	-	0	ID=cds1033;Parent=gene1151;Dbxref=Genbank:NP_688069.1,GeneID:1013864;Name=NP_688069.1;Note=identified by match to PFAM protein family HMM PF00296;gbkey=CDS;product=luciferase family protein;protein_id=NP_688069.1;transl_table=11
NC_004116.1	RefSeq	gene	1070916	1072115	.	-	.	ID=gene1152;Dbxref=GeneID:1013865;Name=SAG1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1061
NC_004116.1	RefSeq	CDS	1070916	1072115	.	-	0	ID=cds1034;Parent=gene1152;Dbxref=Genbank:NP_688070.1,GeneID:1013865;Name=NP_688070.1;Note=identified by match to PFAM protein family HMM PF00724;gbkey=CDS;product=oxidoreductase%2C FMN-binding;protein_id=NP_688070.1;transl_table=11
NC_004116.1	RefSeq	gene	1072108	1072956	.	-	.	ID=gene1153;Dbxref=GeneID:1013866;Name=SAG1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1062
NC_004116.1	RefSeq	CDS	1072108	1072956	.	-	0	ID=cds1035;Parent=gene1153;Dbxref=Genbank:NP_688071.1,GeneID:1013866;Name=NP_688071.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688071.1;transl_table=11
NC_004116.1	RefSeq	gene	1073098	1073784	.	+	.	ID=gene1154;Dbxref=GeneID:1013867;Name=SAG1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1063
NC_004116.1	RefSeq	CDS	1073098	1073784	.	+	0	ID=cds1036;Parent=gene1154;Dbxref=Genbank:NP_688072.1,GeneID:1013867;Name=NP_688072.1;Note=similar to GB:L77117 PID:1591587%3B identified by sequence similarity;gbkey=CDS;product=phosphopantothenate--cysteine ligase;protein_id=NP_688072.1;transl_table=11
NC_004116.1	RefSeq	gene	1073777	1074319	.	+	.	ID=gene1155;Dbxref=GeneID:1013868;Name=SAG1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1064
NC_004116.1	RefSeq	CDS	1073777	1074319	.	+	0	ID=cds1037;Parent=gene1155;Dbxref=Genbank:NP_688073.1,GeneID:1013868;Name=NP_688073.1;Note=decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine.;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=NP_688073.1;transl_table=11
NC_004116.1	RefSeq	gene	1074365	1074937	.	+	.	ID=gene1156;Dbxref=GeneID:1013869;Name=SAG1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1065
NC_004116.1	RefSeq	CDS	1074365	1074937	.	+	0	ID=cds1038;Parent=gene1156;Dbxref=Genbank:NP_688074.1,GeneID:1013869;Name=NP_688074.1;Note=similar to OMNI:NTL01SPL0962%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688074.1;transl_table=11
NC_004116.1	RefSeq	gene	1075047	1076765	.	+	.	ID=gene1157;Dbxref=GeneID:1013870;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=SAG1066
NC_004116.1	RefSeq	CDS	1075047	1076765	.	+	0	ID=cds1039;Parent=gene1157;Dbxref=Genbank:NP_688075.1,GeneID:1013870;Name=NP_688075.1;Note=identified by match to PFAM protein family HMM PF00408;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=NP_688075.1;transl_table=11
NC_004116.1	RefSeq	gene	1076837	1077373	.	+	.	ID=gene1158;Dbxref=GeneID:1013871;Name=SAG1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1067
NC_004116.1	RefSeq	CDS	1076837	1077373	.	+	0	ID=cds1040;Parent=gene1158;Dbxref=Genbank:NP_688076.1,GeneID:1013871;Name=NP_688076.1;gbkey=CDS;product=IS861%2C transposase OrfA;protein_id=NP_688076.1;transl_table=11
NC_004116.1	RefSeq	gene	1077349	1078182	.	+	.	ID=gene1159;Dbxref=GeneID:1013872;Name=SAG1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1068
NC_004116.1	RefSeq	CDS	1077349	1078182	.	+	0	ID=cds1041;Parent=gene1159;Dbxref=Genbank:NP_688077.1,GeneID:1013872;Name=NP_688077.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=IS861%2C transposase OrfB;protein_id=NP_688077.1;transl_table=11
NC_004116.1	RefSeq	gene	1078264	1078461	.	-	.	ID=gene1160;Dbxref=GeneID:1013873;Name=SAG1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1069
NC_004116.1	RefSeq	CDS	1078264	1078461	.	-	0	ID=cds1042;Parent=gene1160;Dbxref=Genbank:NP_688078.1,GeneID:1013873;Name=NP_688078.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688078.1;transl_table=11
NC_004116.1	RefSeq	gene	1078475	1080208	.	-	.	ID=gene1161;Dbxref=GeneID:1013874;Name=SAG1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1070
NC_004116.1	RefSeq	CDS	1078475	1080208	.	-	0	ID=cds1043;Parent=gene1161;Dbxref=Genbank:NP_688079.1,GeneID:1013874;Name=NP_688079.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=NP_688079.1;transl_table=11
NC_004116.1	RefSeq	gene	1080209	1081930	.	-	.	ID=gene1162;Dbxref=GeneID:1013875;Name=SAG1071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1071
NC_004116.1	RefSeq	CDS	1080209	1081930	.	-	0	ID=cds1044;Parent=gene1162;Dbxref=Genbank:NP_688080.1,GeneID:1013875;Name=NP_688080.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=NP_688080.1;transl_table=11
NC_004116.1	RefSeq	gene	1081942	1082544	.	-	.	ID=gene1163;Dbxref=GeneID:1013876;Name=SAG1072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1072
NC_004116.1	RefSeq	CDS	1081942	1082544	.	-	0	ID=cds1045;Parent=gene1163;Dbxref=Genbank:NP_688081.1,GeneID:1013876;Name=NP_688081.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688081.1;transl_table=11
NC_004116.1	RefSeq	gene	1082546	1083523	.	-	.	ID=gene1164;Dbxref=GeneID:1013877;Name=SAG1073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1073
NC_004116.1	RefSeq	CDS	1082546	1083523	.	-	0	ID=cds1046;Parent=gene1164;Dbxref=Genbank:NP_688082.1,GeneID:1013877;Name=NP_688082.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688082.1;transl_table=11
NC_004116.1	RefSeq	gene	1083528	1084784	.	-	.	ID=gene1165;Dbxref=GeneID:1013878;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=SAG1074
NC_004116.1	RefSeq	CDS	1083528	1084784	.	-	0	ID=cds1047;Parent=gene1165;Dbxref=Genbank:NP_688083.1,GeneID:1013878;Name=NP_688083.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=NP_688083.1;transl_table=11
NC_004116.1	RefSeq	gene	1084876	1085427	.	-	.	ID=gene1166;Dbxref=GeneID:1013879;Name=SAG1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1075
NC_004116.1	RefSeq	CDS	1084876	1085427	.	-	0	ID=cds1048;Parent=gene1166;Dbxref=Genbank:NP_688084.1,GeneID:1013879;Name=NP_688084.1;Note=identified by match to PFAM protein family HMM PF01300;gbkey=CDS;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=NP_688084.1;transl_table=11
NC_004116.1	RefSeq	gene	1085465	1086295	.	-	.	ID=gene1167;Dbxref=GeneID:1013880;Name=SAG1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1076
NC_004116.1	RefSeq	CDS	1085465	1086295	.	-	0	ID=cds1049;Parent=gene1167;Dbxref=Genbank:NP_688085.1,GeneID:1013880;Name=NP_688085.1;Note=identified by match to TIGR protein family HMM TIGR00536;gbkey=CDS;product=HemK family modification methylase;protein_id=NP_688085.1;transl_table=11
NC_004116.1	RefSeq	gene	1086295	1087374	.	-	.	ID=gene1168;Dbxref=GeneID:1013881;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SAG1077
NC_004116.1	RefSeq	CDS	1086295	1087374	.	-	0	ID=cds1050;Parent=gene1168;Dbxref=Genbank:NP_688086.1,GeneID:1013881;Name=NP_688086.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=NP_688086.1;transl_table=11
NC_004116.1	RefSeq	gene	1087409	1087978	.	-	.	ID=gene1169;Dbxref=GeneID:1013882;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=SAG1078
NC_004116.1	RefSeq	CDS	1087409	1087978	.	-	0	ID=cds1051;Parent=gene1169;Dbxref=Genbank:NP_688087.1,GeneID:1013882;Name=NP_688087.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;gene=tdk;product=thymidine kinase;protein_id=NP_688087.1;transl_table=11
NC_004116.1	RefSeq	gene	1088116	1088298	.	+	.	ID=gene1170;Dbxref=GeneID:1013883;Name=xylM;gbkey=Gene;gene=xylM;gene_biotype=protein_coding;locus_tag=SAG1079
NC_004116.1	RefSeq	CDS	1088116	1088298	.	+	0	ID=cds1052;Parent=gene1170;Dbxref=Genbank:NP_688088.1,GeneID:1013883;Name=NP_688088.1;Note=4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown;gbkey=CDS;gene=xylM;product=4-oxalocrotonate tautomerase;protein_id=NP_688088.1;transl_table=11
NC_004116.1	RefSeq	gene	1088274	1088417	.	-	.	ID=gene1171;Dbxref=GeneID:1013884;Name=SAG1080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1080
NC_004116.1	RefSeq	CDS	1088274	1088417	.	-	0	ID=cds1053;Parent=gene1171;Dbxref=Genbank:NP_688089.1,GeneID:1013884;Name=NP_688089.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688089.1;transl_table=11
NC_004116.1	RefSeq	gene	1088447	1089385	.	+	.	ID=gene1172;Dbxref=GeneID:1013885;Name=SAG1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1081
NC_004116.1	RefSeq	CDS	1088447	1089385	.	+	0	ID=cds1054;Parent=gene1172;Dbxref=Genbank:NP_688090.1,GeneID:1013885;Name=NP_688090.1;Note=identified by match to PFAM protein family HMM PF02424;gbkey=CDS;product=ApbE family protein;protein_id=NP_688090.1;transl_table=11
NC_004116.1	RefSeq	gene	1089403	1090005	.	+	.	ID=gene1173;Dbxref=GeneID:1013886;Name=SAG1082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1082
NC_004116.1	RefSeq	CDS	1089403	1090005	.	+	0	ID=cds1055;Parent=gene1173;Dbxref=Genbank:NP_688091.1,GeneID:1013886;Name=NP_688091.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688091.1;transl_table=11
NC_004116.1	RefSeq	gene	1090029	1091264	.	+	.	ID=gene1174;Dbxref=GeneID:1013887;Name=SAG1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1083
NC_004116.1	RefSeq	CDS	1090029	1091264	.	+	0	ID=cds1056;Parent=gene1174;Dbxref=Genbank:NP_688092.1,GeneID:1013887;Name=NP_688092.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688092.1;transl_table=11
NC_004116.1	RefSeq	gene	1091363	1092151	.	+	.	ID=gene1175;Dbxref=GeneID:1013888;Name=SAG1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1084
NC_004116.1	RefSeq	CDS	1091363	1092151	.	+	0	ID=cds1057;Parent=gene1175;Dbxref=Genbank:NP_688093.1,GeneID:1013888;Name=NP_688093.1;Note=identified by match to PFAM protein family HMM PF01226;gbkey=CDS;product=formate/nitrite transporter family protein;protein_id=NP_688093.1;transl_table=11
NC_004116.1	RefSeq	gene	1092250	1093524	.	-	.	ID=gene1176;Dbxref=GeneID:1013889;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=SAG1085
NC_004116.1	RefSeq	CDS	1092250	1093524	.	-	0	ID=cds1058;Parent=gene1176;Dbxref=Genbank:NP_688094.1,GeneID:1013889;Name=NP_688094.1;Note=identified by match to PFAM protein family HMM PF00860;gbkey=CDS;gene=pbuX;product=xanthine permease;protein_id=NP_688094.1;transl_table=11
NC_004116.1	RefSeq	gene	1093524	1094105	.	-	.	ID=gene1177;Dbxref=GeneID:1013890;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=SAG1086
NC_004116.1	RefSeq	CDS	1093524	1094105	.	-	0	ID=cds1059;Parent=gene1177;Dbxref=Genbank:NP_688095.1,GeneID:1013890;Name=NP_688095.1;Note=Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine;gbkey=CDS;gene=xpt;product=xanthine phosphoribosyltransferase;protein_id=NP_688095.1;transl_table=11
NC_004116.1	RefSeq	gene	1094361	1095344	.	-	.	ID=gene1178;Dbxref=GeneID:1013891;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=SAG1087
NC_004116.1	RefSeq	CDS	1094361	1095344	.	-	0	ID=cds1060;Parent=gene1178;Dbxref=Genbank:NP_688096.1,GeneID:1013891;Name=NP_688096.1;Note=identified by match to PFAM protein family HMM PF00478;gbkey=CDS;gene=guaC;product=guanosine 5'-monophosphate oxidoreductase;protein_id=NP_688096.1;transl_table=11
NC_004116.1	RefSeq	gene	1095548	1096888	.	-	.	ID=gene1179;Dbxref=GeneID:1013892;Name=SAG1088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1088
NC_004116.1	RefSeq	CDS	1095548	1096888	.	-	0	ID=cds1061;Parent=gene1179;Dbxref=Genbank:NP_688097.1,GeneID:1013892;Name=NP_688097.1;gbkey=CDS;product=EmrB/QacA family drug resistance transporter;protein_id=NP_688097.1;transl_table=11
NC_004116.1	RefSeq	gene	1097159	1097851	.	+	.	ID=gene1180;Dbxref=GeneID:1013893;Name=SAG1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1089
NC_004116.1	RefSeq	CDS	1097159	1097851	.	+	0	ID=cds1062;Parent=gene1180;Dbxref=Genbank:NP_688098.1,GeneID:1013893;Name=NP_688098.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688098.1;transl_table=11
NC_004116.1	RefSeq	gene	1097922	1099922	.	-	.	ID=gene1181;Dbxref=GeneID:1013894;Name=SAG1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1090
NC_004116.1	RefSeq	CDS	1097922	1099922	.	-	0	ID=cds1063;Parent=gene1181;Dbxref=Genbank:NP_688099.1,GeneID:1013894;Name=NP_688099.1;Note=identified by match to PFAM protein family HMM PF02705;gbkey=CDS;product=potassium uptake protein;protein_id=NP_688099.1;transl_table=11
NC_004116.1	RefSeq	gene	1100057	1100707	.	-	.	ID=gene1182;Dbxref=GeneID:1013895;Name=SAG1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1091
NC_004116.1	RefSeq	CDS	1100057	1100707	.	-	0	ID=cds1064;Parent=gene1182;Dbxref=Genbank:NP_688100.1,GeneID:1013895;Name=NP_688100.1;Note=identified by match to PFAM protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=NP_688100.1;transl_table=11
NC_004116.1	RefSeq	gene	1100881	1101873	.	-	.	ID=gene1183;Dbxref=GeneID:1013896;Name=eutD;gbkey=Gene;gene=eutD;gene_biotype=protein_coding;locus_tag=SAG1092
NC_004116.1	RefSeq	CDS	1100881	1101873	.	-	0	ID=cds1065;Parent=gene1183;Dbxref=Genbank:NP_688101.1,GeneID:1013896;Name=NP_688101.1;Note=in Salmonella this enzyme is required for ethanolamine catabolism%3B has higher affinity for CoA than Pta;gbkey=CDS;gene=eutD;product=phosphotransacetylase;protein_id=NP_688101.1;transl_table=11
NC_004116.1	RefSeq	gene	1101899	1102783	.	-	.	ID=gene1184;Dbxref=GeneID:1013897;Name=SAG1093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1093
NC_004116.1	RefSeq	CDS	1101899	1102783	.	-	0	ID=cds1066;Parent=gene1184;Dbxref=Genbank:NP_688102.1,GeneID:1013897;Name=NP_688102.1;Note=identified by match to PFAM protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=NP_688102.1;transl_table=11
NC_004116.1	RefSeq	gene	1102780	1103616	.	-	.	ID=gene1185;Dbxref=GeneID:1013898;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=SAG1094
NC_004116.1	RefSeq	CDS	1102780	1103616	.	-	0	ID=cds1067;Parent=gene1185;Dbxref=Genbank:NP_688103.1,GeneID:1013898;Name=NP_688103.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate/ATP-NAD kinase;protein_id=NP_688103.1;transl_table=11
NC_004116.1	RefSeq	gene	1103591	1104262	.	-	.	ID=gene1186;Dbxref=GeneID:1013899;Name=SAG1095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1095
NC_004116.1	RefSeq	CDS	1103591	1104262	.	-	0	ID=cds1068;Parent=gene1186;Dbxref=Genbank:NP_688104.1,GeneID:1013899;Name=NP_688104.1;Note=similar to OMNI:NTL01SPL0878%3B identified by sequence similarity;gbkey=CDS;product=GTP pyrophosphokinase;protein_id=NP_688104.1;transl_table=11
NC_004116.1	RefSeq	gene	1104372	1104944	.	+	.	ID=gene1187;Dbxref=GeneID:1013900;Name=SAG1096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1096
NC_004116.1	RefSeq	CDS	1104372	1104944	.	+	0	ID=cds1069;Parent=gene1187;Dbxref=Genbank:NP_688105.1,GeneID:1013900;Name=NP_688105.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688105.1;transl_table=11
NC_004116.1	RefSeq	gene	1105121	1106095	.	+	.	ID=gene1188;Dbxref=GeneID:1013901;Name=prsA-2;gbkey=Gene;gene=prsA-2;gene_biotype=protein_coding;locus_tag=SAG1097
NC_004116.1	RefSeq	CDS	1105121	1106095	.	+	0	ID=cds1070;Parent=gene1188;Dbxref=Genbank:NP_688106.1,GeneID:1013901;Name=NP_688106.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;gene=prsA-2;product=ribose-phosphate pyrophosphokinase;protein_id=NP_688106.1;transl_table=11
NC_004116.1	RefSeq	gene	1106099	1107214	.	+	.	ID=gene1189;Dbxref=GeneID:1013902;Name=iscS-1;gbkey=Gene;gene=iscS-1;gene_biotype=protein_coding;locus_tag=SAG1098
NC_004116.1	RefSeq	CDS	1106099	1107214	.	+	0	ID=cds1071;Parent=gene1189;Dbxref=Genbank:NP_688107.1,GeneID:1013902;Name=NP_688107.1;Note=identified by match to PFAM protein family HMM PF00266;gbkey=CDS;gene=iscS-1;product=cysteine desulfurase;protein_id=NP_688107.1;transl_table=11
NC_004116.1	RefSeq	gene	1107216	1107563	.	+	.	ID=gene1190;Dbxref=GeneID:1013903;Name=SAG1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1099
NC_004116.1	RefSeq	CDS	1107216	1107563	.	+	0	ID=cds1072;Parent=gene1190;Dbxref=Genbank:NP_688108.1,GeneID:1013903;Name=NP_688108.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688108.1;transl_table=11
NC_004116.1	RefSeq	gene	1107724	1108356	.	+	.	ID=gene1191;Dbxref=GeneID:1013904;Name=SAG1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1100
NC_004116.1	RefSeq	CDS	1107724	1108356	.	+	0	ID=cds1073;Parent=gene1191;Dbxref=Genbank:NP_688109.1,GeneID:1013904;Name=NP_688109.1;Note=modulates transcription in response to the NADH/NAD(+) redox state;gbkey=CDS;product=redox-sensing transcriptional repressor Rex;protein_id=NP_688109.1;transl_table=11
NC_004116.1	RefSeq	gene	1108369	1109049	.	-	.	ID=gene1192;Dbxref=GeneID:1013905;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=SAG1101
NC_004116.1	RefSeq	CDS	1108369	1109049	.	-	0	ID=cds1074;Parent=gene1192;Dbxref=Genbank:NP_688110.1,GeneID:1013905;Name=NP_688110.1;Note=Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase;gbkey=CDS;gene=radC;product=DNA repair protein RadC;protein_id=NP_688110.1;transl_table=11
NC_004116.1	RefSeq	gene	1109145	1110278	.	-	.	ID=gene1193;Dbxref=GeneID:1013906;Name=SAG1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1102
NC_004116.1	RefSeq	CDS	1109145	1110278	.	-	0	ID=cds1075;Parent=gene1193;Dbxref=Genbank:NP_688111.1,GeneID:1013906;Name=NP_688111.1;Note=identified by match to PFAM protein family HMM PF01594;gbkey=CDS;product=hypothetical protein;protein_id=NP_688111.1;transl_table=11
NC_004116.1	RefSeq	gene	1110369	1111805	.	-	.	ID=gene1194;Dbxref=GeneID:1013907;Name=arb;gbkey=Gene;gene=arb;gene_biotype=protein_coding;locus_tag=SAG1103
NC_004116.1	RefSeq	CDS	1110369	1111805	.	-	0	ID=cds1076;Parent=gene1194;Dbxref=Genbank:NP_688112.1,GeneID:1013907;Name=NP_688112.1;Note=required for arbutin uptake and metabolism;gbkey=CDS;gene=arb;product=6-phospho-beta-glucosidase;protein_id=NP_688112.1;transl_table=11
NC_004116.1	RefSeq	gene	1111968	1112582	.	-	.	ID=gene1195;Dbxref=GeneID:1013908;Name=SAG1104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1104
NC_004116.1	RefSeq	CDS	1111968	1112582	.	-	0	ID=cds1077;Parent=gene1195;Dbxref=Genbank:NP_688113.1,GeneID:1013908;Name=NP_688113.1;gbkey=CDS;product=platelet activating factor;protein_id=NP_688113.1;transl_table=11
NC_004116.1	RefSeq	gene	1112683	1113504	.	-	.	ID=gene1196;Dbxref=GeneID:1013909;Name=SAG1105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1105
NC_004116.1	RefSeq	CDS	1112683	1113504	.	-	0	ID=cds1078;Parent=gene1196;Dbxref=Genbank:NP_688114.1,GeneID:1013909;Name=NP_688114.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_688114.1;transl_table=11
NC_004116.1	RefSeq	gene	1114129	1115058	.	+	.	ID=gene1197;Dbxref=GeneID:1013910;Name=SAG1106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1106
NC_004116.1	RefSeq	CDS	1114129	1115058	.	+	0	ID=cds1079;Parent=gene1197;Dbxref=Genbank:NP_688115.1,GeneID:1013910;Name=NP_688115.1;Note=identified by match to PFAM protein family HMM PF00165;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=NP_688115.1;transl_table=11
NC_004116.1	RefSeq	gene	1115115	1116647	.	-	.	ID=gene1198;Dbxref=GeneID:1013911;Name=SAG1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1107
NC_004116.1	RefSeq	CDS	1115115	1116647	.	-	0	ID=cds1080;Parent=gene1198;Dbxref=Genbank:NP_688116.1,GeneID:1013911;Name=NP_688116.1;Note=identified by match to PFAM protein family HMM PF00654;gbkey=CDS;product=voltage-gated chloride channel family protein;protein_id=NP_688116.1;transl_table=11
NC_004116.1	RefSeq	gene	1116756	1117829	.	-	.	ID=gene1199;Dbxref=GeneID:1013912;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=SAG1108
NC_004116.1	RefSeq	CDS	1116756	1117829	.	-	0	ID=cds1081;Parent=gene1199;Dbxref=Genbank:NP_688117.1,GeneID:1013912;Name=NP_688117.1;Note=identified by match to PFAM protein family HMM PF01547;gbkey=CDS;gene=potD;product=spermidine/putrescine ABC transporter spermidine/putrescine-binding protein;protein_id=NP_688117.1;transl_table=11
NC_004116.1	RefSeq	gene	1117822	1118598	.	-	.	ID=gene1200;Dbxref=GeneID:1013913;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=SAG1109
NC_004116.1	RefSeq	CDS	1117822	1118598	.	-	0	ID=cds1082;Parent=gene1200;Dbxref=Genbank:NP_688118.1,GeneID:1013913;Name=NP_688118.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;gene=potC;product=spermidine/putrescine ABC transporter permease;protein_id=NP_688118.1;transl_table=11
NC_004116.1	RefSeq	gene	1118595	1119389	.	-	.	ID=gene1201;Dbxref=GeneID:1013914;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=SAG1110
NC_004116.1	RefSeq	CDS	1118595	1119389	.	-	0	ID=cds1083;Parent=gene1201;Dbxref=Genbank:NP_688119.1,GeneID:1013914;Name=NP_688119.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;gene=potB;product=spermidine/putrescine ABC transporter permease;protein_id=NP_688119.1;transl_table=11
NC_004116.1	RefSeq	gene	1119373	1120527	.	-	.	ID=gene1202;Dbxref=GeneID:1013915;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=SAG1111
NC_004116.1	RefSeq	CDS	1119373	1120527	.	-	0	ID=cds1084;Parent=gene1202;Dbxref=Genbank:NP_688120.1,GeneID:1013915;Name=NP_688120.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=potA;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=NP_688120.1;transl_table=11
NC_004116.1	RefSeq	gene	1120576	1121478	.	-	.	ID=gene1203;Dbxref=GeneID:1013916;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SAG1112
NC_004116.1	RefSeq	CDS	1120576	1121478	.	-	0	ID=cds1085;Parent=gene1203;Dbxref=Genbank:NP_688121.1,GeneID:1013916;Name=NP_688121.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=NP_688121.1;transl_table=11
NC_004116.1	RefSeq	gene	1121622	1122110	.	-	.	ID=gene1204;Dbxref=GeneID:1013917;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=SAG1113
NC_004116.1	RefSeq	CDS	1121622	1122110	.	-	0	ID=cds1086;Parent=gene1204;Dbxref=Genbank:NP_688122.1,GeneID:1013917;Name=NP_688122.1;Note=identified by match to PFAM protein family HMM PF01288;gbkey=CDS;gene=folK;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=NP_688122.1;transl_table=11
NC_004116.1	RefSeq	gene	1122107	1122469	.	-	.	ID=gene1205;Dbxref=GeneID:1013918;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=SAG1114
NC_004116.1	RefSeq	CDS	1122107	1122469	.	-	0	ID=cds1087;Parent=gene1205;Dbxref=Genbank:NP_688123.1,GeneID:1013918;Name=NP_688123.1;Note=identified by match to PFAM protein family HMM PF02152;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase;protein_id=NP_688123.1;transl_table=11
NC_004116.1	RefSeq	gene	1122471	1123274	.	-	.	ID=gene1206;Dbxref=GeneID:1013919;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SAG1115
NC_004116.1	RefSeq	CDS	1122471	1123274	.	-	0	ID=cds1088;Parent=gene1206;Dbxref=Genbank:NP_688124.1,GeneID:1013919;Name=NP_688124.1;Note=identified by match to PFAM protein family HMM PF00809;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=NP_688124.1;transl_table=11
NC_004116.1	RefSeq	gene	1123278	1123841	.	-	.	ID=gene1207;Dbxref=GeneID:1013920;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SAG1116
NC_004116.1	RefSeq	CDS	1123278	1123841	.	-	0	ID=cds1089;Parent=gene1207;Dbxref=Genbank:NP_688125.1,GeneID:1013920;Name=NP_688125.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=NP_688125.1;transl_table=11
NC_004116.1	RefSeq	gene	1123860	1125122	.	-	.	ID=gene1208;Dbxref=GeneID:1013921;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=SAG1117
NC_004116.1	RefSeq	CDS	1123860	1125122	.	-	0	ID=cds1090;Parent=gene1208;Dbxref=Genbank:NP_688126.1,GeneID:1013921;Name=NP_688126.1;Note=identified by match to TIGR protein family HMM TIGR01499;gbkey=CDS;gene=folC;product=folylpolyglutamate synthase;protein_id=NP_688126.1;transl_table=11
NC_004116.1	RefSeq	gene	1125124	1126011	.	-	.	ID=gene1209;Dbxref=GeneID:1013922;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=SAG1118
NC_004116.1	RefSeq	CDS	1125124	1126011	.	-	0	ID=cds1091;Parent=gene1209;Dbxref=Genbank:NP_688127.1,GeneID:1013922;Name=NP_688127.1;Note=identified by match to PFAM protein family HMM PF00892;gbkey=CDS;gene=rarD;product=rarD protein;protein_id=NP_688127.1;transl_table=11
NC_004116.1	RefSeq	gene	1125998	1126864	.	-	.	ID=gene1210;Dbxref=GeneID:1013923;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=SAG1119
NC_004116.1	RefSeq	CDS	1125998	1126864	.	-	0	ID=cds1092;Parent=gene1210;Dbxref=Genbank:NP_688128.1,GeneID:1013923;Name=NP_688128.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=NP_688128.1;transl_table=11
NC_004116.1	RefSeq	gene	1126866	1128149	.	-	.	ID=gene1211;Dbxref=GeneID:1013924;Name=hom;gbkey=Gene;gene=hom;gene_biotype=protein_coding;locus_tag=SAG1120
NC_004116.1	RefSeq	CDS	1126866	1128149	.	-	0	ID=cds1093;Parent=gene1211;Dbxref=Genbank:NP_688129.1,GeneID:1013924;Name=NP_688129.1;Note=catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine;gbkey=CDS;gene=hom;product=homoserine dehydrogenase;protein_id=NP_688129.1;transl_table=11
NC_004116.1	RefSeq	gene	1128326	1129213	.	+	.	ID=gene1212;Dbxref=GeneID:1013925;Name=SAG1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1121
NC_004116.1	RefSeq	CDS	1128326	1129213	.	+	0	ID=cds1094;Parent=gene1212;Dbxref=Genbank:NP_688130.1,GeneID:1013925;Name=NP_688130.1;Note=identified by match to PFAM protein family HMM PF01522;gbkey=CDS;product=polysaccharide deacetylase;protein_id=NP_688130.1;transl_table=11
NC_004116.1	RefSeq	gene	1129236	1130783	.	-	.	ID=gene1213;Dbxref=GeneID:1013926;Name=SAG1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1122
NC_004116.1	RefSeq	CDS	1129236	1130783	.	-	0	ID=cds1095;Parent=gene1213;Dbxref=Genbank:NP_688131.1,GeneID:1013926;Name=NP_688131.1;Note=identified by match to PFAM protein family HMM PF02028;gbkey=CDS;product=transporter BCCT family protein;protein_id=NP_688131.1;transl_table=11
NC_004116.1	RefSeq	gene	1130793	1130897	.	-	.	ID=gene1214;Dbxref=GeneID:1013927;Name=SAG1123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1123
NC_004116.1	RefSeq	CDS	1130793	1130897	.	-	0	ID=cds1096;Parent=gene1214;Dbxref=Genbank:NP_688132.1,GeneID:1013927;Name=NP_688132.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688132.1;transl_table=11
NC_004116.1	RefSeq	gene	1130926	1132302	.	-	.	ID=gene1215;Dbxref=GeneID:1013928;Name=SAG1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1124
NC_004116.1	RefSeq	CDS	1130926	1132302	.	-	0	ID=cds1097;Parent=gene1215;Dbxref=Genbank:NP_688133.1,GeneID:1013928;Name=NP_688133.1;Note=identified by match to PFAM protein family HMM PF00171;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=NP_688133.1;transl_table=11
NC_004116.1	RefSeq	gene	1132376	1133383	.	-	.	ID=gene1216;Dbxref=GeneID:1013929;Name=SAG1125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1125
NC_004116.1	RefSeq	CDS	1132376	1133383	.	-	0	ID=cds1098;Parent=gene1216;Dbxref=Genbank:NP_688134.1,GeneID:1013929;Name=NP_688134.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688134.1;transl_table=11
NC_004116.1	RefSeq	gene	1133491	1134177	.	-	.	ID=gene1217;Dbxref=GeneID:1013930;Name=SAG1126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1126
NC_004116.1	RefSeq	CDS	1133491	1134177	.	-	0	ID=cds1099;Parent=gene1217;Dbxref=Genbank:NP_688135.1,GeneID:1013930;Name=NP_688135.1;Note=similar to OMNI:NTL01SPL0680%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688135.1;transl_table=11
NC_004116.1	RefSeq	gene	1134596	1135936	.	+	.	ID=gene1218;Dbxref=GeneID:1013931;Name=SAG1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1127
NC_004116.1	RefSeq	CDS	1134596	1135936	.	+	0	ID=cds1100;Parent=gene1218;Dbxref=Genbank:NP_688136.1,GeneID:1013931;Name=NP_688136.1;Note=similar to OMNI:NTL01SA1825%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688136.1;transl_table=11
NC_004116.1	RefSeq	gene	1136133	1136330	.	+	.	ID=gene1219;Dbxref=GeneID:1013932;Name=SAG1128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1128
NC_004116.1	RefSeq	CDS	1136133	1136330	.	+	0	ID=cds1101;Parent=gene1219;Dbxref=Genbank:NP_688137.1,GeneID:1013932;Name=NP_688137.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_688137.1;transl_table=11
NC_004116.1	RefSeq	gene	1136375	1136485	.	+	.	ID=gene1220;Dbxref=GeneID:1013933;Name=SAG1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1129
NC_004116.1	RefSeq	CDS	1136375	1136485	.	+	0	ID=cds1102;Parent=gene1220;Dbxref=Genbank:NP_688138.1,GeneID:1013933;Name=NP_688138.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688138.1;transl_table=11
NC_004116.1	RefSeq	gene	1136814	1136963	.	+	.	ID=gene1221;Dbxref=GeneID:1013934;Name=SAG1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1130
NC_004116.1	RefSeq	CDS	1136814	1136963	.	+	0	ID=cds1103;Parent=gene1221;Dbxref=Genbank:NP_688139.1,GeneID:1013934;Name=NP_688139.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688139.1;transl_table=11
NC_004116.1	RefSeq	gene	1137039	1137533	.	-	.	ID=gene1222;Dbxref=GeneID:1013935;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=SAG1131
NC_004116.1	RefSeq	CDS	1137039	1137533	.	-	0	ID=cds1104;Parent=gene1222;Dbxref=Genbank:NP_688140.1,GeneID:1013935;Name=NP_688140.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=NP_688140.1;transl_table=11
NC_004116.1	RefSeq	gene	1137606	1138265	.	-	.	ID=gene1223;Dbxref=GeneID:1013936;Name=SAG1132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1132
NC_004116.1	RefSeq	CDS	1137606	1138265	.	-	0	ID=cds1105;Parent=gene1223;Dbxref=Genbank:NP_688141.1,GeneID:1013936;Name=NP_688141.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688141.1;transl_table=11
NC_004116.1	RefSeq	gene	1138265	1139029	.	-	.	ID=gene1224;Dbxref=GeneID:1013937;Name=SAG1133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1133
NC_004116.1	RefSeq	CDS	1138265	1139029	.	-	0	ID=cds1106;Parent=gene1224;Dbxref=Genbank:NP_688142.1,GeneID:1013937;Name=NP_688142.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688142.1;transl_table=11
NC_004116.1	RefSeq	gene	1139034	1139675	.	-	.	ID=gene1225;Dbxref=GeneID:1013938;Name=SAG1134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1134
NC_004116.1	RefSeq	CDS	1139034	1139675	.	-	0	ID=cds1107;Parent=gene1225;Dbxref=Genbank:NP_688143.1,GeneID:1013938;Name=NP_688143.1;Note=identified by match to PFAM protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_688143.1;transl_table=11
NC_004116.1	RefSeq	gene	1139839	1140390	.	-	.	ID=gene1226;Dbxref=GeneID:1013939;Name=SAG1135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1135
NC_004116.1	RefSeq	CDS	1139839	1140390	.	-	0	ID=cds1108;Parent=gene1226;Dbxref=Genbank:NP_688144.1,GeneID:1013939;Name=NP_688144.1;Note=similar to OMNI:EF0080%3B identified by sequence similarity;gbkey=CDS;product=gls24 protein;protein_id=NP_688144.1;transl_table=11
NC_004116.1	RefSeq	gene	1140412	1140609	.	-	.	ID=gene1227;Dbxref=GeneID:1013940;Name=SAG1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1136
NC_004116.1	RefSeq	CDS	1140412	1140609	.	-	0	ID=cds1109;Parent=gene1227;Dbxref=Genbank:NP_688145.1,GeneID:1013940;Name=NP_688145.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688145.1;transl_table=11
NC_004116.1	RefSeq	gene	1140656	1141198	.	-	.	ID=gene1228;Dbxref=GeneID:1013941;Name=SAG1137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1137
NC_004116.1	RefSeq	CDS	1140656	1141198	.	-	0	ID=cds1110;Parent=gene1228;Dbxref=Genbank:NP_688146.1,GeneID:1013941;Name=NP_688146.1;Note=similar to OMNI:EF0604%3B identified by sequence similarity;gbkey=CDS;product=gls24 protein;protein_id=NP_688146.1;transl_table=11
NC_004116.1	RefSeq	gene	1141254	1141448	.	-	.	ID=gene1229;Dbxref=GeneID:1013942;Name=SAG1138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1138
NC_004116.1	RefSeq	CDS	1141254	1141448	.	-	0	ID=cds1111;Parent=gene1229;Dbxref=Genbank:NP_688147.1,GeneID:1013942;Name=NP_688147.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688147.1;transl_table=11
NC_004116.1	RefSeq	gene	1141458	1142039	.	-	.	ID=gene1230;Dbxref=GeneID:1013943;Name=SAG1139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1139
NC_004116.1	RefSeq	CDS	1141458	1142039	.	-	0	ID=cds1112;Parent=gene1230;Dbxref=Genbank:NP_688148.1,GeneID:1013943;Name=NP_688148.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688148.1;transl_table=11
NC_004116.1	RefSeq	gene	1142054	1142302	.	-	.	ID=gene1231;Dbxref=GeneID:1013944;Name=SAG1140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1140
NC_004116.1	RefSeq	CDS	1142054	1142302	.	-	0	ID=cds1113;Parent=gene1231;Dbxref=Genbank:NP_688149.1,GeneID:1013944;Name=NP_688149.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688149.1;transl_table=11
NC_004116.1	RefSeq	gene	1142350	1142688	.	-	.	ID=gene1232;Dbxref=GeneID:1013945;Name=SAG1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1141
NC_004116.1	RefSeq	CDS	1142350	1142688	.	-	0	ID=cds1114;Parent=gene1232;Dbxref=Genbank:NP_688150.1,GeneID:1013945;Name=NP_688150.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688150.1;transl_table=11
NC_004116.1	RefSeq	gene	1143007	1145286	.	-	.	ID=gene1233;Dbxref=GeneID:1013946;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=SAG1142
NC_004116.1	RefSeq	CDS	1143007	1145286	.	-	0	ID=cds1115;Parent=gene1233;Dbxref=Genbank:NP_688151.1,GeneID:1013946;Name=NP_688151.1;Note=identified by match to PFAM protein family HMM PF00580;gbkey=CDS;gene=pcrA;product=ATP-dependent DNA helicase PcrA;protein_id=NP_688151.1;transl_table=11
NC_004116.1	RefSeq	gene	1145392	1145778	.	-	.	ID=gene1234;Dbxref=GeneID:1013947;Name=SAG1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1143
NC_004116.1	RefSeq	CDS	1145392	1145778	.	-	0	ID=cds1116;Parent=gene1234;Dbxref=Genbank:NP_688152.1,GeneID:1013947;Name=NP_688152.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688152.1;transl_table=11
NC_004116.1	RefSeq	gene	1145911	1147236	.	-	.	ID=gene1235;Dbxref=GeneID:1013948;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=SAG1144
NC_004116.1	RefSeq	CDS	1145911	1147236	.	-	0	ID=cds1117;Parent=gene1235;Dbxref=Genbank:NP_688153.1,GeneID:1013948;Name=NP_688153.1;Note=identified by match to PFAM protein family HMM PF00860;gbkey=CDS;gene=uraA;product=uracil permease;protein_id=NP_688153.1;transl_table=11
NC_004116.1	RefSeq	gene	1147833	1149179	.	+	.	ID=gene1236;Dbxref=GeneID:1013949;Name=SAG1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1145
NC_004116.1	RefSeq	CDS	1147833	1149179	.	+	0	ID=cds1118;Parent=gene1236;Dbxref=Genbank:NP_688154.1,GeneID:1013949;Name=NP_688154.1;Note=identified by match to PFAM protein family HMM PF01235;gbkey=CDS;product=sodium:alanine symporter family protein;protein_id=NP_688154.1;transl_table=11
NC_004116.1	RefSeq	gene	1149243	1150478	.	+	.	ID=gene1237;Dbxref=GeneID:1013950;Name=SAG1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1146
NC_004116.1	RefSeq	CDS	1149243	1150478	.	+	0	ID=cds1119;Parent=gene1237;Dbxref=Genbank:NP_688155.1,GeneID:1013950;Name=NP_688155.1;Note=identified by match to PFAM protein family HMM PF01545;gbkey=CDS;product=cation efflux family protein;protein_id=NP_688155.1;transl_table=11
NC_004116.1	RefSeq	gene	1150637	1151029	.	+	.	ID=gene1238;Dbxref=GeneID:1013951;Name=SAG1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1147
NC_004116.1	RefSeq	CDS	1150637	1151029	.	+	0	ID=cds1120;Parent=gene1238;Dbxref=Genbank:NP_688156.1,GeneID:1013951;Name=NP_688156.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688156.1;transl_table=11
NC_004116.1	RefSeq	gene	1151010	1151705	.	+	.	ID=gene1239;Dbxref=GeneID:1013952;Name=SAG1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1148
NC_004116.1	RefSeq	CDS	1151010	1151705	.	+	0	ID=cds1121;Parent=gene1239;Dbxref=Genbank:NP_688157.1,GeneID:1013952;Name=NP_688157.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688157.1;transl_table=11
NC_004116.1	RefSeq	gene	1151774	1152397	.	+	.	ID=gene1240;Dbxref=GeneID:1013953;Name=SAG1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1149
NC_004116.1	RefSeq	CDS	1151774	1152397	.	+	0	ID=cds1122;Parent=gene1240;Dbxref=Genbank:NP_688158.1,GeneID:1013953;Name=NP_688158.1;Note=similar to OMNI:NTL01SPL1018%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688158.1;transl_table=11
NC_004116.1	RefSeq	gene	1152666	1152737	.	-	.	ID=gene1241;Dbxref=GeneID:1013954;Name=tRNA-Arg-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Arg-1
NC_004116.1	RefSeq	tRNA	1152666	1152737	.	-	.	ID=rna91;Parent=gene1241;Dbxref=GeneID:1013954;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	exon	1152666	1152737	.	-	.	ID=id93;Parent=rna91;Dbxref=GeneID:1013954;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	gene	1152810	1154012	.	-	.	ID=gene1242;Dbxref=GeneID:1013955;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SAG1150
NC_004116.1	RefSeq	CDS	1152810	1154012	.	-	0	ID=cds1123;Parent=gene1242;Dbxref=Genbank:NP_688159.1,GeneID:1013955;Name=NP_688159.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=NP_688159.1;transl_table=11
NC_004116.1	RefSeq	gene	1154135	1154209	.	-	.	ID=gene1243;Dbxref=GeneID:1013956;Name=tRNA-Gln-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gln-1
NC_004116.1	RefSeq	tRNA	1154135	1154209	.	-	.	ID=rna92;Parent=gene1243;Dbxref=GeneID:1013956;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	exon	1154135	1154209	.	-	.	ID=id94;Parent=rna92;Dbxref=GeneID:1013956;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	gene	1154215	1154295	.	-	.	ID=gene1244;Dbxref=GeneID:1013957;Name=tRNA-Tyr-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Tyr-1
NC_004116.1	RefSeq	tRNA	1154215	1154295	.	-	.	ID=rna93;Parent=gene1244;Dbxref=GeneID:1013957;gbkey=tRNA;product=tRNA-Tyr
NC_004116.1	RefSeq	exon	1154215	1154295	.	-	.	ID=id95;Parent=rna93;Dbxref=GeneID:1013957;gbkey=tRNA;product=tRNA-Tyr
NC_004116.1	RefSeq	gene	1154356	1154586	.	-	.	ID=gene1245;Dbxref=GeneID:1013958;Name=SAG1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1151
NC_004116.1	RefSeq	CDS	1154356	1154586	.	-	0	ID=cds1124;Parent=gene1245;Dbxref=Genbank:NP_688160.1,GeneID:1013958;Name=NP_688160.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688160.1;transl_table=11
NC_004116.1	RefSeq	gene	1154670	1155692	.	-	.	ID=gene1246;Dbxref=GeneID:1013959;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=SAG1152
NC_004116.1	RefSeq	CDS	1154670	1155692	.	-	0	ID=cds1125;Parent=gene1246;Dbxref=Genbank:NP_688161.1,GeneID:1013959;Name=NP_688161.1;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=NP_688161.1;transl_table=11
NC_004116.1	RefSeq	gene	1155806	1158265	.	-	.	ID=gene1247;Dbxref=GeneID:1013960;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=SAG1153
NC_004116.1	RefSeq	CDS	1155806	1158265	.	-	0	ID=cds1126;Parent=gene1247;Dbxref=Genbank:NP_688162.1,GeneID:1013960;Name=NP_688162.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parC;product=DNA topoisomerase IV subunit A;protein_id=NP_688162.1;transl_table=11
NC_004116.1	RefSeq	gene	1158399	1160360	.	-	.	ID=gene1248;Dbxref=GeneID:1013961;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=SAG1154
NC_004116.1	RefSeq	CDS	1158399	1160360	.	-	0	ID=cds1127;Parent=gene1248;Dbxref=Genbank:NP_688163.1,GeneID:1013961;Name=NP_688163.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parE;product=DNA topoisomerase IV subunit B;protein_id=NP_688163.1;transl_table=11
NC_004116.1	RefSeq	gene	1160462	1161100	.	+	.	ID=gene1249;Dbxref=GeneID:1013962;Name=SAG1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1155
NC_004116.1	RefSeq	CDS	1160462	1161100	.	+	0	ID=cds1128;Parent=gene1249;Dbxref=Genbank:NP_688164.1,GeneID:1013962;Name=NP_688164.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase PlsY;protein_id=NP_688164.1;transl_table=11
NC_004116.1	RefSeq	gene	1161166	1161819	.	-	.	ID=gene1250;Dbxref=GeneID:1013963;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=SAG1156
NC_004116.1	RefSeq	CDS	1161166	1161819	.	-	0	ID=cds1129;Parent=gene1250;Dbxref=Genbank:NP_688165.1,GeneID:1013963;Name=NP_688165.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;gene=ung;product=uracil-DNA glycosylase;protein_id=NP_688165.1;transl_table=11
NC_004116.1	RefSeq	gene	1161918	1162403	.	-	.	ID=gene1251;Dbxref=GeneID:1013964;Name=SAG1157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1157
NC_004116.1	RefSeq	CDS	1161918	1162403	.	-	0	ID=cds1130;Parent=gene1251;Dbxref=Genbank:NP_688166.1,GeneID:1013964;Name=NP_688166.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688166.1;transl_table=11
NC_004116.1	RefSeq	gene	1162517	1163758	.	-	.	ID=gene1252;Dbxref=GeneID:1013965;Name=neuA;gbkey=Gene;gene=neuA;gene_biotype=protein_coding;locus_tag=SAG1158
NC_004116.1	RefSeq	CDS	1162517	1163758	.	-	0	ID=cds1131;Parent=gene1252;Dbxref=Genbank:NP_688167.1,GeneID:1013965;Name=NP_688167.1;Note=identified by match to PFAM protein family HMM PF02348;gbkey=CDS;gene=neuA;product=CMP-N-acetylneuraminic acid synthetase NeuA;protein_id=NP_688167.1;transl_table=11
NC_004116.1	RefSeq	gene	1163769	1164398	.	-	.	ID=gene1253;Dbxref=GeneID:1013966;Name=neuD;gbkey=Gene;gene=neuD;gene_biotype=protein_coding;locus_tag=SAG1159
NC_004116.1	RefSeq	CDS	1163769	1164398	.	-	0	ID=cds1132;Parent=gene1253;Dbxref=Genbank:NP_688168.1,GeneID:1013966;Name=NP_688168.1;gbkey=CDS;gene=neuD;product=neuD protein;protein_id=NP_688168.1;transl_table=11
NC_004116.1	RefSeq	gene	1164395	1165549	.	-	.	ID=gene1254;Dbxref=GeneID:1013967;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=SAG1160
NC_004116.1	RefSeq	CDS	1164395	1165549	.	-	0	ID=cds1133;Parent=gene1254;Dbxref=Genbank:NP_688169.1,GeneID:1013967;Name=NP_688169.1;gbkey=CDS;gene=neuC;product=UDP-N-acetylglucosamine-2-epimerase NeuC;protein_id=NP_688169.1;transl_table=11
NC_004116.1	RefSeq	gene	1165626	1166651	.	-	.	ID=gene1255;Dbxref=GeneID:1013968;Name=neuB;gbkey=Gene;gene=neuB;gene_biotype=protein_coding;locus_tag=SAG1161
NC_004116.1	RefSeq	CDS	1165626	1166651	.	-	0	ID=cds1134;Parent=gene1255;Dbxref=Genbank:NP_688170.1,GeneID:1013968;Name=NP_688170.1;Note=identified by match to PFAM protein family HMM PF01354;gbkey=CDS;gene=neuB;product=N-acetyl neuramic acid synthetase NeuB;protein_id=NP_688170.1;transl_table=11
NC_004116.1	RefSeq	gene	1166651	1168051	.	-	.	ID=gene1256;Dbxref=GeneID:1013969;Name=cpsL;gbkey=Gene;gene=cpsL;gene_biotype=protein_coding;locus_tag=SAG1162
NC_004116.1	RefSeq	CDS	1166651	1168051	.	-	0	ID=cds1135;Parent=gene1256;Dbxref=Genbank:NP_688171.1,GeneID:1013969;Name=NP_688171.1;Note=identified by match to PFAM protein family HMM PF01943;gbkey=CDS;gene=cpsL;product=polysaccharide biosynthesis protein CpsL;protein_id=NP_688171.1;transl_table=11
NC_004116.1	RefSeq	gene	1168048	1169004	.	-	.	ID=gene1257;Dbxref=GeneID:1013970;Name=cpsK;gbkey=Gene;gene=cpsK;gene_biotype=protein_coding;locus_tag=SAG1163
NC_004116.1	RefSeq	CDS	1168048	1169004	.	-	0	ID=cds1136;Parent=gene1257;Dbxref=Genbank:NP_688172.1,GeneID:1013970;Name=NP_688172.1;Note=similar to GP:13549137%3B identified by sequence similarity;gbkey=CDS;gene=cpsK;product=polysaccharide biosynthesis protein CpsK(V);protein_id=NP_688172.1;transl_table=11
NC_004116.1	RefSeq	gene	1169001	1169966	.	-	.	ID=gene1258;Dbxref=GeneID:1013971;Name=cpsJ;gbkey=Gene;gene=cpsJ;gene_biotype=protein_coding;locus_tag=SAG1164
NC_004116.1	RefSeq	CDS	1169001	1169966	.	-	0	ID=cds1137;Parent=gene1258;Dbxref=Genbank:NP_688173.1,GeneID:1013971;Name=NP_688173.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;gene=cpsJ;product=glycosyl transferase CpsJ(V);protein_id=NP_688173.1;transl_table=11
NC_004116.1	RefSeq	gene	1169959	1170942	.	-	.	ID=gene1259;Dbxref=GeneID:1013972;Name=cpsO;gbkey=Gene;gene=cpsO;gene_biotype=protein_coding;locus_tag=SAG1165
NC_004116.1	RefSeq	CDS	1169959	1170942	.	-	0	ID=cds1138;Parent=gene1259;Dbxref=Genbank:NP_688174.1,GeneID:1013972;Name=NP_688174.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;gene=cpsO;product=glycosyl transferase CpsO(V);protein_id=NP_688174.1;transl_table=11
NC_004116.1	RefSeq	gene	1170946	1171833	.	-	.	ID=gene1260;Dbxref=GeneID:1013973;Name=cpsN;gbkey=Gene;gene=cpsN;gene_biotype=protein_coding;locus_tag=SAG1166
NC_004116.1	RefSeq	CDS	1170946	1171833	.	-	0	ID=cds1139;Parent=gene1260;Dbxref=Genbank:NP_688175.1,GeneID:1013973;Name=NP_688175.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;gene=cpsN;product=glycosyl transferase CpsN(V);protein_id=NP_688175.1;transl_table=11
NC_004116.1	RefSeq	gene	1171859	1172584	.	-	.	ID=gene1261;Dbxref=GeneID:1013974;Name=cpsM;gbkey=Gene;gene=cpsM;gene_biotype=protein_coding;locus_tag=SAG1167
NC_004116.1	RefSeq	CDS	1171859	1172584	.	-	0	ID=cds1140;Parent=gene1261;Dbxref=Genbank:NP_688176.1,GeneID:1013974;Name=NP_688176.1;Note=similar to GP:13549133%3B identified by sequence similarity;gbkey=CDS;gene=cpsM;product=polysaccharide biosynthesis protein CpsM(V);protein_id=NP_688176.1;transl_table=11
NC_004116.1	RefSeq	gene	1172623	1173717	.	-	.	ID=gene1262;Dbxref=GeneID:1013975;Name=cpsH;gbkey=Gene;gene=cpsH;gene_biotype=protein_coding;locus_tag=SAG1168
NC_004116.1	RefSeq	CDS	1172623	1173717	.	-	0	ID=cds1141;Parent=gene1262;Dbxref=Genbank:NP_688177.1,GeneID:1013975;Name=NP_688177.1;Note=similar to GP:13549132%3B identified by sequence similarity;gbkey=CDS;gene=cpsH;product=polysaccharide biosynthesis protein cpsH(V);protein_id=NP_688177.1;transl_table=11
NC_004116.1	RefSeq	gene	1173704	1174195	.	-	.	ID=gene1263;Dbxref=GeneID:1013976;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=SAG1169
NC_004116.1	RefSeq	CDS	1173704	1174195	.	-	0	ID=cds1142;Parent=gene1263;Dbxref=Genbank:NP_688178.1,GeneID:1013976;Name=NP_688178.1;Note=similar to GP:5823214%3B identified by sequence similarity;gbkey=CDS;gene=cpsG;product=glycosyl transferase CpsG(V);protein_id=NP_688178.1;transl_table=11
NC_004116.1	RefSeq	gene	1174195	1174644	.	-	.	ID=gene1264;Dbxref=GeneID:1013977;Name=cpsF;gbkey=Gene;gene=cpsF;gene_biotype=protein_coding;locus_tag=SAG1170
NC_004116.1	RefSeq	CDS	1174195	1174644	.	-	0	ID=cds1143;Parent=gene1264;Dbxref=Genbank:NP_688179.1,GeneID:1013977;Name=NP_688179.1;Note=similar to GP:13549130%3B identified by sequence similarity;gbkey=CDS;gene=cpsF;product=polysaccharide biosynthesis protein CpsF;protein_id=NP_688179.1;transl_table=11
NC_004116.1	RefSeq	gene	1174668	1176056	.	-	.	ID=gene1265;Dbxref=GeneID:1013978;Name=cpsE;gbkey=Gene;gene=cpsE;gene_biotype=protein_coding;locus_tag=SAG1171
NC_004116.1	RefSeq	CDS	1174668	1176056	.	-	0	ID=cds1144;Parent=gene1265;Dbxref=Genbank:NP_688180.1,GeneID:1013978;Name=NP_688180.1;Note=identified by match to PFAM protein family HMM PF02397;gbkey=CDS;gene=cpsE;product=glycosyl transferase CpsE;protein_id=NP_688180.1;transl_table=11
NC_004116.1	RefSeq	gene	1176069	1176758	.	-	.	ID=gene1266;Dbxref=GeneID:1013979;Name=cpsD;gbkey=Gene;gene=cpsD;gene_biotype=protein_coding;locus_tag=SAG1172
NC_004116.1	RefSeq	CDS	1176069	1176758	.	-	0	ID=cds1145;Parent=gene1266;Dbxref=Genbank:NP_688181.1,GeneID:1013979;Name=NP_688181.1;Note=identified by match to TIGR protein family HMM TIGR01007;gbkey=CDS;gene=cpsD;product=cpsD protein;protein_id=NP_688181.1;transl_table=11
NC_004116.1	RefSeq	gene	1176769	1177461	.	-	.	ID=gene1267;Dbxref=GeneID:1013980;Name=cpsC;gbkey=Gene;gene=cpsC;gene_biotype=protein_coding;locus_tag=SAG1173
NC_004116.1	RefSeq	CDS	1176769	1177461	.	-	0	ID=cds1146;Parent=gene1267;Dbxref=Genbank:NP_688182.1,GeneID:1013980;Name=NP_688182.1;Note=identified by match to PFAM protein family HMM PF02706;gbkey=CDS;gene=cpsC;product=cpsC protein;protein_id=NP_688182.1;transl_table=11
NC_004116.1	RefSeq	gene	1177470	1178201	.	-	.	ID=gene1268;Dbxref=GeneID:1013981;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=SAG1174
NC_004116.1	RefSeq	CDS	1177470	1178201	.	-	0	ID=cds1147;Parent=gene1268;Dbxref=Genbank:NP_688183.1,GeneID:1013981;Name=NP_688183.1;Note=identified by match to PFAM protein family HMM PF02811;gbkey=CDS;gene=cpsB;product=capsular polysaccharide biosynthesis protein CpsB;protein_id=NP_688183.1;transl_table=11
NC_004116.1	RefSeq	gene	1178207	1179664	.	-	.	ID=gene1269;Dbxref=GeneID:1013982;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=SAG1175
NC_004116.1	RefSeq	CDS	1178207	1179664	.	-	0	ID=cds1148;Parent=gene1269;Dbxref=Genbank:NP_688184.1,GeneID:1013982;Name=NP_688184.1;Note=identified by match to TIGR protein family HMM TIGR00350;gbkey=CDS;gene=cpsA;product=capsular polysaccharide biosynthesis protein CpsA;protein_id=NP_688184.1;transl_table=11
NC_004116.1	RefSeq	gene	1179904	1180776	.	+	.	ID=gene1270;Dbxref=GeneID:1013983;Name=SAG1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1176
NC_004116.1	RefSeq	CDS	1179904	1180776	.	+	0	ID=cds1149;Parent=gene1270;Dbxref=Genbank:NP_688185.1,GeneID:1013983;Name=NP_688185.1;Note=identified by match to PFAM protein family HMM PF00126;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=NP_688185.1;transl_table=11
NC_004116.1	RefSeq	gene	1180801	1181568	.	-	.	ID=gene1271;Dbxref=GeneID:1013984;Name=SAG1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1177
NC_004116.1	RefSeq	CDS	1180801	1181568	.	-	0	ID=cds1150;Parent=gene1271;Dbxref=Genbank:NP_688186.1,GeneID:1013984;Name=NP_688186.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688186.1;transl_table=11
NC_004116.1	RefSeq	gene	1181577	1182287	.	-	.	ID=gene1272;Dbxref=GeneID:1013985;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SAG1178
NC_004116.1	RefSeq	CDS	1181577	1182287	.	-	0	ID=cds1151;Parent=gene1272;Dbxref=Genbank:NP_688187.1,GeneID:1013985;Name=NP_688187.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=NP_688187.1;transl_table=11
NC_004116.1	RefSeq	gene	1182271	1183527	.	-	.	ID=gene1273;Dbxref=GeneID:1013986;Name=SAG1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1179
NC_004116.1	RefSeq	CDS	1182271	1183527	.	-	0	ID=cds1152;Parent=gene1273;Dbxref=Genbank:NP_688188.1,GeneID:1013986;Name=NP_688188.1;Note=identified by match to PFAM protein family HMM PF00654;gbkey=CDS;product=voltage-gated chloride channel family protein;protein_id=NP_688188.1;transl_table=11
NC_004116.1	RefSeq	gene	1183529	1184338	.	-	.	ID=gene1274;Dbxref=GeneID:1013987;Name=deoD-2;gbkey=Gene;gene=deoD-2;gene_biotype=protein_coding;locus_tag=SAG1180
NC_004116.1	RefSeq	CDS	1183529	1184338	.	-	0	ID=cds1153;Parent=gene1274;Dbxref=Genbank:NP_688189.1,GeneID:1013987;Name=NP_688189.1;Note=catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation;gbkey=CDS;gene=deoD-2;product=purine nucleoside phosphorylase;protein_id=NP_688189.1;transl_table=11
NC_004116.1	RefSeq	gene	1184377	1184784	.	-	.	ID=gene1275;Dbxref=GeneID:1013988;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=SAG1181
NC_004116.1	RefSeq	CDS	1184377	1184784	.	-	0	ID=cds1154;Parent=gene1275;Dbxref=Genbank:NP_688190.1,GeneID:1013988;Name=NP_688190.1;gbkey=CDS;gene=arsC;product=arsenate reductase;protein_id=NP_688190.1;transl_table=11
NC_004116.1	RefSeq	gene	1184835	1186046	.	-	.	ID=gene1276;Dbxref=GeneID:1013989;Name=deoB-1;gbkey=Gene;gene=deoB-1;gene_biotype=protein_coding;locus_tag=SAG1182
NC_004116.1	RefSeq	CDS	1184835	1186046	.	-	0	ID=cds1155;Parent=gene1276;Dbxref=Genbank:NP_688191.1,GeneID:1013989;Name=NP_688191.1;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;gbkey=CDS;gene=deoB-1;product=phosphopentomutase;protein_id=NP_688191.1;transl_table=11
NC_004116.1	RefSeq	gene	1186103	1186774	.	-	.	ID=gene1277;Dbxref=GeneID:1013990;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=SAG1183
NC_004116.1	RefSeq	CDS	1186103	1186774	.	-	0	ID=cds1156;Parent=gene1277;Dbxref=Genbank:NP_688192.1,GeneID:1013990;Name=NP_688192.1;Note=Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;gene=rpiA;product=ribose-5-phosphate isomerase A;protein_id=NP_688192.1;transl_table=11
NC_004116.1	RefSeq	gene	1187012	1187722	.	-	.	ID=gene1278;Dbxref=GeneID:1013991;Name=SAG1184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1184
NC_004116.1	RefSeq	CDS	1187012	1187722	.	-	0	ID=cds1157;Parent=gene1278;Dbxref=Genbank:NP_688193.1,GeneID:1013991;Name=NP_688193.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688193.1;transl_table=11
NC_004116.1	RefSeq	gene	1187812	1188600	.	-	.	ID=gene1279;Dbxref=GeneID:1013992;Name=estA;gbkey=Gene;gene=estA;gene_biotype=protein_coding;locus_tag=SAG1185
NC_004116.1	RefSeq	CDS	1187812	1188600	.	-	0	ID=cds1158;Parent=gene1279;Dbxref=Genbank:NP_688194.1,GeneID:1013992;Name=NP_688194.1;Note=similar to GP:7453518%3B identified by sequence similarity;gbkey=CDS;gene=estA;product=tributyrin esterase;protein_id=NP_688194.1;transl_table=11
NC_004116.1	RefSeq	gene	1188657	1190318	.	-	.	ID=gene1280;Dbxref=GeneID:1013993;Name=SAG1186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1186
NC_004116.1	RefSeq	CDS	1188657	1190318	.	-	0	ID=cds1159;Parent=gene1280;Dbxref=Genbank:NP_688195.1,GeneID:1013993;Name=NP_688195.1;Note=identified by match to PFAM protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=NP_688195.1;transl_table=11
NC_004116.1	RefSeq	gene	1190614	1191375	.	-	.	ID=gene1281;Dbxref=GeneID:1013994;Name=SAG1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1187
NC_004116.1	RefSeq	CDS	1190614	1191375	.	-	0	ID=cds1160;Parent=gene1281;Dbxref=Genbank:NP_688196.1,GeneID:1013994;Name=NP_688196.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688196.1;transl_table=11
NC_004116.1	RefSeq	gene	1191375	1192238	.	-	.	ID=gene1282;Dbxref=GeneID:1013995;Name=SAG1188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1188
NC_004116.1	RefSeq	CDS	1191375	1192238	.	-	0	ID=cds1161;Parent=gene1282;Dbxref=Genbank:NP_688197.1,GeneID:1013995;Name=NP_688197.1;gbkey=CDS;product=ABC transporter permease;protein_id=NP_688197.1;transl_table=11
NC_004116.1	RefSeq	gene	1192251	1193255	.	-	.	ID=gene1283;Dbxref=GeneID:1013996;Name=SAG1189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1189
NC_004116.1	RefSeq	CDS	1192251	1193255	.	-	0	ID=cds1162;Parent=gene1283;Dbxref=Genbank:NP_688198.1,GeneID:1013996;Name=NP_688198.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688198.1;transl_table=11
NC_004116.1	RefSeq	gene	1193614	1195269	.	+	.	ID=gene1284;Dbxref=GeneID:1013997;Name=pavA;gbkey=Gene;gene=pavA;gene_biotype=protein_coding;locus_tag=SAG1190
NC_004116.1	RefSeq	CDS	1193614	1195269	.	+	0	ID=cds1163;Parent=gene1284;Dbxref=Genbank:NP_688199.1,GeneID:1013997;Name=NP_688199.1;Note=similar to OMNI:SP0966%3B identified by sequence similarity;gbkey=CDS;gene=pavA;product=adherence and virulence protein A;protein_id=NP_688199.1;transl_table=11
NC_004116.1	RefSeq	gene	1195323	1196042	.	-	.	ID=gene1285;Dbxref=GeneID:1013998;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=SAG1191
NC_004116.1	RefSeq	CDS	1195323	1196042	.	-	0	ID=cds1164;Parent=gene1285;Dbxref=Genbank:NP_688200.1,GeneID:1013998;Name=NP_688200.1;Note=identified by match to PFAM protein family HMM PF03306;gbkey=CDS;gene=budA;product=alpha-acetolactate decarboxylase;protein_id=NP_688200.1;transl_table=11
NC_004116.1	RefSeq	gene	1196056	1197738	.	-	.	ID=gene1286;Dbxref=GeneID:1013999;Name=ilvK;gbkey=Gene;gene=ilvK;gene_biotype=protein_coding;locus_tag=SAG1192
NC_004116.1	RefSeq	CDS	1196056	1197738	.	-	0	ID=cds1165;Parent=gene1286;Dbxref=Genbank:NP_688201.1,GeneID:1013999;Name=NP_688201.1;Note=catalyzes the formation of 2-acetolactate from pyruvate in stationary phase;gbkey=CDS;gene=ilvK;product=acetolactate synthase;protein_id=NP_688201.1;transl_table=11
NC_004116.1	RefSeq	gene	1197848	1199074	.	-	.	ID=gene1287;Dbxref=GeneID:1014000;Name=SAG1193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1193
NC_004116.1	RefSeq	CDS	1197848	1199074	.	-	0	ID=cds1166;Parent=gene1287;Dbxref=Genbank:NP_688202.1,GeneID:1014000;Name=NP_688202.1;Note=identified by match to PFAM protein family HMM PF00515;gbkey=CDS;product=hypothetical protein;protein_id=NP_688202.1;transl_table=11
NC_004116.1	RefSeq	gene	1199064	1200254	.	-	.	ID=gene1288;Dbxref=GeneID:1014001;Name=SAG1194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1194
NC_004116.1	RefSeq	CDS	1199064	1200254	.	-	0	ID=cds1167;Parent=gene1288;Dbxref=Genbank:NP_688203.1,GeneID:1014001;Name=NP_688203.1;Note=identified by match to PFAM protein family HMM PF01594;gbkey=CDS;product=hypothetical protein;protein_id=NP_688203.1;transl_table=11
NC_004116.1	RefSeq	gene	1200346	1200807	.	-	.	ID=gene1289;Dbxref=GeneID:1014002;Name=SAG1195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1195
NC_004116.1	RefSeq	CDS	1200346	1200807	.	-	0	ID=cds1168;Parent=gene1289;Dbxref=Genbank:NP_688204.1,GeneID:1014002;Name=NP_688204.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=NP_688204.1;transl_table=11
NC_004116.1	RefSeq	gene	1200797	1201279	.	-	.	ID=gene1290;Dbxref=GeneID:1014003;Name=mutX;gbkey=Gene;gene=mutX;gene_biotype=protein_coding;locus_tag=SAG1196
NC_004116.1	RefSeq	CDS	1200797	1201279	.	-	0	ID=cds1169;Parent=gene1290;Dbxref=Genbank:NP_688205.1,GeneID:1014003;Name=NP_688205.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;gene=mutX;product=mutator MutT protein;protein_id=NP_688205.1;transl_table=11
NC_004116.1	RefSeq	gene	1201497	1204715	.	+	.	ID=gene1291;Dbxref=GeneID:1014004;Name=SAG1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1197
NC_004116.1	RefSeq	CDS	1201497	1204715	.	+	0	ID=cds1170;Parent=gene1291;Dbxref=Genbank:NP_688206.1,GeneID:1014004;Name=NP_688206.1;Note=identified by match to PFAM protein family HMM PF02278;gbkey=CDS;product=hyaluronate lyase;protein_id=NP_688206.1;transl_table=11
NC_004116.1	RefSeq	gene	1204767	1205813	.	-	.	ID=gene1292;Dbxref=GeneID:1014005;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=SAG1198
NC_004116.1	RefSeq	CDS	1204767	1205813	.	-	0	ID=cds1171;Parent=gene1292;Dbxref=Genbank:NP_688207.1,GeneID:1014005;Name=NP_688207.1;Note=identified by match to PFAM protein family HMM PF01370;gbkey=CDS;gene=rfbB;product=dTDP-glucose 4%2C6-dehydratase;protein_id=NP_688207.1;transl_table=11
NC_004116.1	RefSeq	gene	1206020	1206613	.	-	.	ID=gene1293;Dbxref=GeneID:1014006;Name=SAG1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1199
NC_004116.1	RefSeq	CDS	1206020	1206613	.	-	0	ID=cds1172;Parent=gene1293;Dbxref=Genbank:NP_688208.1,GeneID:1014006;Name=NP_688208.1;Note=identified by match to PFAM protein family HMM PF00908;gbkey=CDS;product=dTDP-4-keto-6-deoxyglucose-3%2C5-epimerase;protein_id=NP_688208.1;transl_table=11
NC_004116.1	RefSeq	gene	1206613	1207482	.	-	.	ID=gene1294;Dbxref=GeneID:1014007;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=SAG1200
NC_004116.1	RefSeq	CDS	1206613	1207482	.	-	0	ID=cds1173;Parent=gene1294;Dbxref=Genbank:NP_688209.1,GeneID:1014007;Name=NP_688209.1;Note=identified by match to PFAM protein family HMM PF00483;gbkey=CDS;gene=rfbA;product=glucose-1-phosphate thymidylyltransferase;protein_id=NP_688209.1;transl_table=11
NC_004116.1	RefSeq	gene	1207541	1208644	.	-	.	ID=gene1295;Dbxref=GeneID:1014008;Name=SAG1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1201
NC_004116.1	RefSeq	CDS	1207541	1208644	.	-	0	ID=cds1174;Parent=gene1295;Dbxref=Genbank:NP_688210.1,GeneID:1014008;Name=NP_688210.1;Note=identified by match to PFAM protein family HMM PF01266;gbkey=CDS;product=iminodiacetate oxidase;protein_id=NP_688210.1;transl_table=11
NC_004116.1	RefSeq	gene	1208653	1209441	.	-	.	ID=gene1296;Dbxref=GeneID:1014009;Name=SAG1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1202
NC_004116.1	RefSeq	CDS	1208653	1209441	.	-	0	ID=cds1175;Parent=gene1296;Dbxref=Genbank:NP_688211.1,GeneID:1014009;Name=NP_688211.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688211.1;transl_table=11
NC_004116.1	RefSeq	gene	1209431	1210114	.	-	.	ID=gene1297;Dbxref=GeneID:1014010;Name=SAG1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1203
NC_004116.1	RefSeq	CDS	1209431	1210114	.	-	0	ID=cds1176;Parent=gene1297;Dbxref=Genbank:NP_688212.1,GeneID:1014010;Name=NP_688212.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688212.1;transl_table=11
NC_004116.1	RefSeq	gene	1210218	1210898	.	-	.	ID=gene1298;Dbxref=GeneID:1014011;Name=SAG1204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1204
NC_004116.1	RefSeq	CDS	1210218	1210898	.	-	0	ID=cds1177;Parent=gene1298;Dbxref=Genbank:NP_688213.1,GeneID:1014011;Name=NP_688213.1;Note=identified by match to TIGR protein family HMM TIGR01446;gbkey=CDS;product=DNA replication protein DnaD;protein_id=NP_688213.1;transl_table=11
NC_004116.1	RefSeq	gene	1211016	1211534	.	-	.	ID=gene1299;Dbxref=GeneID:1014012;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=SAG1205
NC_004116.1	RefSeq	CDS	1211016	1211534	.	-	0	ID=cds1178;Parent=gene1299;Dbxref=Genbank:NP_688214.1,GeneID:1014012;Name=NP_688214.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=NP_688214.1;transl_table=11
NC_004116.1	RefSeq	gene	1211657	1214221	.	-	.	ID=gene1300;Dbxref=GeneID:1014013;Name=SAG1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1206
NC_004116.1	RefSeq	CDS	1211657	1214221	.	-	0	ID=cds1179;Parent=gene1300;Dbxref=Genbank:NP_688215.1,GeneID:1014013;Name=NP_688215.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688215.1;transl_table=11
NC_004116.1	RefSeq	gene	1214205	1214303	.	-	.	ID=gene1301;Dbxref=GeneID:1014014;Name=SAG1207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1207
NC_004116.1	RefSeq	CDS	1214205	1214303	.	-	0	ID=cds1180;Parent=gene1301;Dbxref=Genbank:NP_688216.1,GeneID:1014014;Name=NP_688216.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688216.1;transl_table=11
NC_004116.1	RefSeq	gene	1214373	1216571	.	-	.	ID=gene1302;Dbxref=GeneID:1014015;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=SAG1208
NC_004116.1	RefSeq	CDS	1214373	1216571	.	-	0	ID=cds1181;Parent=gene1302;Dbxref=Genbank:NP_688217.1,GeneID:1014015;Name=NP_688217.1;Note=identified by match to PFAM protein family HMM PF01368;gbkey=CDS;gene=recJ;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=NP_688217.1;transl_table=11
NC_004116.1	RefSeq	gene	1216568	1217329	.	-	.	ID=gene1303;Dbxref=GeneID:1014016;Name=SAG1209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1209
NC_004116.1	RefSeq	CDS	1216568	1217329	.	-	0	ID=cds1182;Parent=gene1303;Dbxref=Genbank:NP_688218.1,GeneID:1014016;Name=NP_688218.1;Note=identified by match to PFAM protein family HMM PF00106;gbkey=CDS;product=short chain dehydrogenase/reductase family oxidoreductase;protein_id=NP_688218.1;transl_table=11
NC_004116.1	RefSeq	gene	1217331	1218260	.	-	.	ID=gene1304;Dbxref=GeneID:1014017;Name=SAG1210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1210
NC_004116.1	RefSeq	CDS	1217331	1218260	.	-	0	ID=cds1183;Parent=gene1304;Dbxref=Genbank:NP_688219.1,GeneID:1014017;Name=NP_688219.1;Note=member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;gbkey=CDS;product=ribonuclease Z;protein_id=NP_688219.1;transl_table=11
NC_004116.1	RefSeq	gene	1218302	1218949	.	-	.	ID=gene1305;Dbxref=GeneID:1014018;Name=SAG1211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1211
NC_004116.1	RefSeq	CDS	1218302	1218949	.	-	0	ID=cds1184;Parent=gene1305;Dbxref=Genbank:NP_688220.1,GeneID:1014018;Name=NP_688220.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688220.1;transl_table=11
NC_004116.1	RefSeq	gene	1218942	1220180	.	-	.	ID=gene1306;Dbxref=GeneID:1014019;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=SAG1212
NC_004116.1	RefSeq	CDS	1218942	1220180	.	-	0	ID=cds1185;Parent=gene1306;Dbxref=Genbank:NP_688221.1,GeneID:1014019;Name=NP_688221.1;Note=identified by match to TIGR protein family HMM TIGR00231;gbkey=CDS;gene=hflX;product=GTP-binding protein HflX;protein_id=NP_688221.1;transl_table=11
NC_004116.1	RefSeq	gene	1220271	1221161	.	-	.	ID=gene1307;Dbxref=GeneID:1014020;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SAG1213
NC_004116.1	RefSeq	CDS	1220271	1221161	.	-	0	ID=cds1186;Parent=gene1307;Dbxref=Genbank:NP_688222.1,GeneID:1014020;Name=NP_688222.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=NP_688222.1;transl_table=11
NC_004116.1	RefSeq	gene	1221272	1221448	.	+	.	ID=gene1308;Dbxref=GeneID:1014021;Name=SAG1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1214
NC_004116.1	RefSeq	CDS	1221272	1221448	.	+	0	ID=cds1187;Parent=gene1308;Dbxref=Genbank:NP_688223.1,GeneID:1014021;Name=NP_688223.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688223.1;transl_table=11
NC_004116.1	RefSeq	gene	1221490	1222407	.	-	.	ID=gene1309;Dbxref=GeneID:1014022;Name=SAG1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1215
NC_004116.1	RefSeq	CDS	1221490	1222407	.	-	0	ID=cds1188;Parent=gene1309;Dbxref=Genbank:NP_688224.1,GeneID:1014022;Name=NP_688224.1;Note=similar to OMNI:SA1184%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688224.1;transl_table=11
NC_004116.1	RefSeq	gene	1222542	1226300	.	-	.	ID=gene1310;Dbxref=GeneID:1014023;Name=SAG1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1216
NC_004116.1	RefSeq	CDS	1222542	1226300	.	-	0	ID=cds1189;Parent=gene1310;Dbxref=Genbank:NP_688225.1,GeneID:1014023;Name=NP_688225.1;Note=identified by match to PFAM protein family HMM PF00128;gbkey=CDS;product=pullulanase;protein_id=NP_688225.1;transl_table=11
NC_004116.1	RefSeq	gene	1226469	1227202	.	-	.	ID=gene1311;Dbxref=GeneID:1014024;Name=SAG1217;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG1217
NC_004116.1	RefSeq	gene	1227217	1227801	.	-	.	ID=gene1312;Dbxref=GeneID:1014025;Name=SAG1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1218
NC_004116.1	RefSeq	CDS	1227217	1227801	.	-	0	ID=cds1190;Parent=gene1312;Dbxref=Genbank:NP_688226.1,GeneID:1014025;Name=NP_688226.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688226.1;transl_table=11
NC_004116.1	RefSeq	gene	1227898	1229304	.	-	.	ID=gene1313;Dbxref=GeneID:1014026;Name=SAG1219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1219
NC_004116.1	RefSeq	CDS	1227898	1229304	.	-	0	ID=cds1191;Parent=gene1313;Dbxref=Genbank:NP_688227.1,GeneID:1014026;Name=NP_688227.1;Note=divalent metal ion-dependent extracellular dipeptidase%3B able to hydrolyze a broad range of dipeptides but no tri-%2C tetra-%2C or larger oligopeptides%3B differences in the amino acid specificity of the cleavage site varies between species%3B similar to succinyl-diaminopimelate desuccinylases;gbkey=CDS;product=dipeptidase PepV;protein_id=NP_688227.1;transl_table=11
NC_004116.1	RefSeq	gene	1229351	1229953	.	-	.	ID=gene1314;Dbxref=GeneID:1014027;Name=SAG1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1220
NC_004116.1	RefSeq	CDS	1229351	1229953	.	-	0	ID=cds1192;Parent=gene1314;Dbxref=Genbank:NP_688228.1,GeneID:1014027;Name=NP_688228.1;Note=identified by match to PFAM protein family HMM PF00881;gbkey=CDS;product=nitroreductase family protein;protein_id=NP_688228.1;transl_table=11
NC_004116.1	RefSeq	gene	1230123	1231904	.	+	.	ID=gene1315;Dbxref=GeneID:1014028;Name=SAG1221;Note=This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to OMNI:NTL01SPL0640%3B identified by sequence similarity%3B glycerophosphoryl diester phosphodiesterase;gbkey=Gene;gene_biotype=other;locus_tag=SAG1221
NC_004116.1	RefSeq	gene	1231946	1233727	.	-	.	ID=gene1316;Dbxref=GeneID:1014029;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SAG1222
NC_004116.1	RefSeq	CDS	1231946	1233727	.	-	0	ID=cds1193;Parent=gene1316;Dbxref=Genbank:NP_688229.1,GeneID:1014029;Name=NP_688229.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=NP_688229.1;transl_table=11
NC_004116.1	RefSeq	gene	1233886	1234653	.	+	.	ID=gene1317;Dbxref=GeneID:1014030;Name=SAG1223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1223
NC_004116.1	RefSeq	CDS	1233886	1234653	.	+	0	ID=cds1194;Parent=gene1317;Dbxref=Genbank:NP_688230.1,GeneID:1014030;Name=NP_688230.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688230.1;transl_table=11
NC_004116.1	RefSeq	gene	1234712	1236052	.	-	.	ID=gene1318;Dbxref=GeneID:1014031;Name=SAG1224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1224
NC_004116.1	RefSeq	CDS	1234712	1236052	.	-	0	ID=cds1195;Parent=gene1318;Dbxref=Genbank:NP_688231.1,GeneID:1014031;Name=NP_688231.1;Note=identified by match to PFAM protein family HMM PF01554;gbkey=CDS;product=MATE efflux family protein;protein_id=NP_688231.1;transl_table=11
NC_004116.1	RefSeq	gene	1236152	1236562	.	-	.	ID=gene1319;Dbxref=GeneID:1014032;Name=SAG1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1225
NC_004116.1	RefSeq	CDS	1236152	1236562	.	-	0	ID=cds1196;Parent=gene1319;Dbxref=Genbank:NP_688232.1,GeneID:1014032;Name=NP_688232.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688232.1;transl_table=11
NC_004116.1	RefSeq	gene	1236572	1237069	.	-	.	ID=gene1320;Dbxref=GeneID:1014033;Name=SAG1226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1226
NC_004116.1	RefSeq	CDS	1236572	1237069	.	-	0	ID=cds1197;Parent=gene1320;Dbxref=Genbank:NP_688233.1,GeneID:1014033;Name=NP_688233.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688233.1;transl_table=11
NC_004116.1	RefSeq	gene	1237291	1237887	.	+	.	ID=gene1321;Dbxref=GeneID:1014034;Name=SAG1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1227
NC_004116.1	RefSeq	CDS	1237291	1237887	.	+	0	ID=cds1198;Parent=gene1321;Dbxref=Genbank:NP_688234.1,GeneID:1014034;Name=NP_688234.1;Note=similar to GB:AL009126%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688234.1;transl_table=11
NC_004116.1	RefSeq	gene	1238076	1238366	.	+	.	ID=gene1322;Dbxref=GeneID:1014035;Name=SAG1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1228
NC_004116.1	RefSeq	CDS	1238076	1238366	.	+	0	ID=cds1199;Parent=gene1322;Dbxref=Genbank:NP_688235.1,GeneID:1014035;Name=NP_688235.1;Note=identified by match to PFAM protein family HMM PF01527;gbkey=CDS;product=ISSdy1%2C transposase OrfA;protein_id=NP_688235.1;transl_table=11
NC_004116.1	RefSeq	gene	1238402	1239181	.	+	.	ID=gene1323;Dbxref=GeneID:1014036;Name=SAG1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1229
NC_004116.1	RefSeq	CDS	1238402	1239181	.	+	0	ID=cds1200;Parent=gene1323;Dbxref=Genbank:NP_688236.1,GeneID:1014036;Name=NP_688236.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=ISSdy1%2C transposase OrfB;protein_id=NP_688236.1;transl_table=11
NC_004116.1	RefSeq	gene	1239405	1239695	.	+	.	ID=gene1324;Dbxref=GeneID:1014037;Name=SAG1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1230
NC_004116.1	RefSeq	CDS	1239405	1239695	.	+	0	ID=cds1201;Parent=gene1324;Dbxref=Genbank:NP_688237.1,GeneID:1014037;Name=NP_688237.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688237.1;transl_table=11
NC_004116.1	RefSeq	gene	1239710	1240537	.	+	.	ID=gene1325;Dbxref=GeneID:1014038;Name=SAG1231;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to PID:929972 PID:929975%3B identified by sequence similarity%3B transposase OrfB%2C IS3 family%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG1231
NC_004116.1	RefSeq	gene	1240583	1240816	.	+	.	ID=gene1326;Dbxref=GeneID:1014039;Name=SAG1232;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GP:2502075%3B identified by sequence similarity%3B transposase OrfB%2C IS3 family%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1232
NC_004116.1	RefSeq	gene	1241015	1243483	.	-	.	ID=gene1327;Dbxref=GeneID:1014040;Name=SAG1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1233
NC_004116.1	RefSeq	CDS	1241015	1243483	.	-	0	ID=cds1202;Parent=gene1327;Dbxref=Genbank:NP_688238.1,GeneID:1014040;Name=NP_688238.1;Note=identified by match to TIGR protein family HMM TIGR01363%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=streptococcal histidine triad family protein;protein_id=NP_688238.1;transl_table=11
NC_004116.1	RefSeq	gene	1243496	1244416	.	-	.	ID=gene1328;Dbxref=GeneID:1014041;Name=lmb;gbkey=Gene;gene=lmb;gene_biotype=protein_coding;locus_tag=SAG1234
NC_004116.1	RefSeq	CDS	1243496	1244416	.	-	0	ID=cds1203;Parent=gene1328;Dbxref=Genbank:NP_688239.1,GeneID:1014041;Name=NP_688239.1;Note=identified by match to PFAM protein family HMM PF01297;gbkey=CDS;gene=lmb;product=laminin-binding surface protein;protein_id=NP_688239.1;transl_table=11
NC_004116.1	RefSeq	gene	1244650	1245927	.	-	.	ID=gene1329;Dbxref=GeneID:1014042;Name=SAG1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1235
NC_004116.1	RefSeq	CDS	1244650	1245927	.	-	0	ID=cds1204;Parent=gene1329;Dbxref=Genbank:NP_688240.1,GeneID:1014042;Name=NP_688240.1;Note=identified by match to PFAM protein family HMM PF00078;gbkey=CDS;product=GBSi1%2C group II intron%2C maturase;protein_id=NP_688240.1;transl_table=11
NC_004116.1	RefSeq	gene	1246509	1249960	.	-	.	ID=gene1330;Dbxref=GeneID:1014043;Name=scpB;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to GB:J05229 SP:P15926 PID:552009%3B identified by sequence similarity%3B C5a peptidase%2C authentic frameshift;gbkey=Gene;gene=scpB;gene_biotype=other;locus_tag=SAG1236
NC_004116.1	RefSeq	gene	1250615	1251949	.	-	.	ID=gene1331;Dbxref=GeneID:1014044;Name=SAG1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1237
NC_004116.1	RefSeq	CDS	1250615	1251949	.	-	0	ID=cds1205;Parent=gene1331;Dbxref=Genbank:NP_688241.1,GeneID:1014044;Name=NP_688241.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688241.1;transl_table=11
NC_004116.1	RefSeq	gene	1252057	1252665	.	-	.	ID=gene1332;Dbxref=GeneID:1014045;Name=SAG1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1238
NC_004116.1	RefSeq	CDS	1252057	1252665	.	-	0	ID=cds1206;Parent=gene1332;Dbxref=Genbank:NP_688242.1,GeneID:1014045;Name=NP_688242.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688242.1;transl_table=11
NC_004116.1	RefSeq	gene	1252715	1252945	.	-	.	ID=gene1333;Dbxref=GeneID:1014046;Name=SAG1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1239
NC_004116.1	RefSeq	CDS	1252715	1252945	.	-	0	ID=cds1207;Parent=gene1333;Dbxref=Genbank:NP_688243.1,GeneID:1014046;Name=NP_688243.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688243.1;transl_table=11
NC_004116.1	RefSeq	gene	1253014	1253391	.	-	.	ID=gene1334;Dbxref=GeneID:1014047;Name=SAG1240;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1240
NC_004116.1	RefSeq	gene	1253409	1253684	.	+	.	ID=gene1335;Dbxref=GeneID:1014048;Name=SAG1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1241
NC_004116.1	RefSeq	CDS	1253409	1253684	.	+	0	ID=cds1208;Parent=gene1335;Dbxref=Genbank:NP_688244.1,GeneID:1014048;Name=NP_688244.1;Note=identified by match to PFAM protein family HMM PF01527;gbkey=CDS;product=IS3 family transposase OrfA;protein_id=NP_688244.1;transl_table=11
NC_004116.1	RefSeq	gene	1253732	1253935	.	+	.	ID=gene1336;Dbxref=GeneID:1014049;Name=SAG1242;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B similar to GP:2160216%3B identified by sequence similarity%3B transposase OrfB%2C IS3 family%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1242
NC_004116.1	RefSeq	gene	1254003	1254293	.	+	.	ID=gene1337;Dbxref=GeneID:1014050;Name=SAG1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1243
NC_004116.1	RefSeq	CDS	1254003	1254293	.	+	0	ID=cds1209;Parent=gene1337;Dbxref=Genbank:NP_688245.1,GeneID:1014050;Name=NP_688245.1;Note=identified by match to PFAM protein family HMM PF01527;gbkey=CDS;product=ISSdy1%2C transposase OrfA;protein_id=NP_688245.1;transl_table=11
NC_004116.1	RefSeq	gene	1254329	1255108	.	+	.	ID=gene1338;Dbxref=GeneID:1014051;Name=SAG1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1244
NC_004116.1	RefSeq	CDS	1254329	1255108	.	+	0	ID=cds1210;Parent=gene1338;Dbxref=Genbank:NP_688246.1,GeneID:1014051;Name=NP_688246.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=ISSdy1%2C transposase OrfB;protein_id=NP_688246.1;transl_table=11
NC_004116.1	RefSeq	gene	1255213	1255329	.	-	.	ID=gene1339;Dbxref=GeneID:1014052;Name=SAG1245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1245
NC_004116.1	RefSeq	CDS	1255213	1255329	.	-	0	ID=cds1211;Parent=gene1339;Dbxref=Genbank:NP_688247.1,GeneID:1014052;Name=NP_688247.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688247.1;transl_table=11
NC_004116.1	RefSeq	gene	1255316	1256485	.	+	.	ID=gene1340;Dbxref=GeneID:1014053;Name=SAG1246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1246
NC_004116.1	RefSeq	CDS	1255316	1256485	.	+	0	ID=cds1212;Parent=gene1340;Dbxref=Genbank:NP_688248.1,GeneID:1014053;Name=NP_688248.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688248.1;transl_table=11
NC_004116.1	RefSeq	gene	1256680	1257879	.	-	.	ID=gene1341;Dbxref=GeneID:1014054;Name=SAG1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1247
NC_004116.1	RefSeq	CDS	1256680	1257879	.	-	0	ID=cds1213;Parent=gene1341;Dbxref=Genbank:NP_688249.1,GeneID:1014054;Name=NP_688249.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=phage integrase family site specific recombinase;protein_id=NP_688249.1;transl_table=11
NC_004116.1	RefSeq	gene	1257902	1258129	.	-	.	ID=gene1342;Dbxref=GeneID:1014055;Name=SAG1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1248
NC_004116.1	RefSeq	CDS	1257902	1258129	.	-	0	ID=cds1214;Parent=gene1342;Dbxref=Genbank:NP_688250.1,GeneID:1014055;Name=NP_688250.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688250.1;transl_table=11
NC_004116.1	RefSeq	gene	1258408	1258632	.	-	.	ID=gene1343;Dbxref=GeneID:1014056;Name=SAG1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1249
NC_004116.1	RefSeq	CDS	1258408	1258632	.	-	0	ID=cds1215;Parent=gene1343;Dbxref=Genbank:NP_688251.1,GeneID:1014056;Name=NP_688251.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_688251.1;transl_table=11
NC_004116.1	RefSeq	gene	1258813	1260678	.	-	.	ID=gene1344;Dbxref=GeneID:1014057;Name=SAG1250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1250
NC_004116.1	RefSeq	CDS	1258813	1260678	.	-	0	ID=cds1216;Parent=gene1344;Dbxref=Genbank:NP_688252.1,GeneID:1014057;Name=NP_688252.1;Note=identified by match to PFAM protein family HMM PF03432;gbkey=CDS;product=Tn5252%2C relaxase;protein_id=NP_688252.1;transl_table=11
NC_004116.1	RefSeq	gene	1260665	1261030	.	-	.	ID=gene1345;Dbxref=GeneID:1014058;Name=SAG1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1251
NC_004116.1	RefSeq	CDS	1260665	1261030	.	-	0	ID=cds1217;Parent=gene1345;Dbxref=Genbank:NP_688253.1,GeneID:1014058;Name=NP_688253.1;Note=similar to OMNI:SP1055%3B identified by sequence similarity;gbkey=CDS;product=Tn5252%2C ORF 9 protein;protein_id=NP_688253.1;transl_table=11
NC_004116.1	RefSeq	gene	1261037	1261399	.	-	.	ID=gene1346;Dbxref=GeneID:1014059;Name=SAG1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1252
NC_004116.1	RefSeq	CDS	1261037	1261399	.	-	0	ID=cds1218;Parent=gene1346;Dbxref=Genbank:NP_688254.1,GeneID:1014059;Name=NP_688254.1;Note=similar to OMNI:SP1054%3B identified by sequence similarity;gbkey=CDS;product=Tn5252%2C ORF 10 protein;protein_id=NP_688254.1;transl_table=11
NC_004116.1	RefSeq	gene	1261820	1263127	.	-	.	ID=gene1347;Dbxref=GeneID:1014060;Name=SAG1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1253
NC_004116.1	RefSeq	CDS	1261820	1263127	.	-	0	ID=cds1219;Parent=gene1347;Dbxref=Genbank:NP_688255.1,GeneID:1014060;Name=NP_688255.1;Note=identified by match to PFAM protein family HMM PF01610%3B This gene is located in a transposable element that also encodes two genes for a mercuric resistance operon%2C and there are two copies of the transposable element in this strain.;gbkey=CDS;product=ISL3 family transposase;protein_id=NP_688255.1;transl_table=11
NC_004116.1	RefSeq	gene	1263287	1264927	.	-	.	ID=gene1348;Dbxref=GeneID:1014061;Name=merA-1;gbkey=Gene;gene=merA-1;gene_biotype=protein_coding;locus_tag=SAG1254
NC_004116.1	RefSeq	CDS	1263287	1264927	.	-	0	ID=cds1220;Parent=gene1348;Dbxref=Genbank:NP_688256.1,GeneID:1014061;Name=NP_688256.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;gene=merA-1;product=mercuric reductase;protein_id=NP_688256.1;transl_table=11
NC_004116.1	RefSeq	gene	1264956	1265348	.	-	.	ID=gene1349;Dbxref=GeneID:1014062;Name=merR-1;gbkey=Gene;gene=merR-1;gene_biotype=protein_coding;locus_tag=SAG1255
NC_004116.1	RefSeq	CDS	1264956	1265348	.	-	0	ID=cds1221;Parent=gene1349;Dbxref=Genbank:NP_688257.1,GeneID:1014062;Name=NP_688257.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;gene=merR-1;product=mercuric resistance operon regulatory protein MerR;protein_id=NP_688257.1;transl_table=11
NC_004116.1	RefSeq	gene	1265909	1266337	.	+	.	ID=gene1350;Dbxref=GeneID:1014063;Name=SAG1256;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00665%3B IS861%2C transposase OrfB%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1256
NC_004116.1	RefSeq	gene	1266612	1268741	.	-	.	ID=gene1351;Dbxref=GeneID:1014064;Name=SAG1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1257
NC_004116.1	RefSeq	CDS	1266612	1268741	.	-	0	ID=cds1222;Parent=gene1351;Dbxref=Genbank:NP_688258.1,GeneID:1014064;Name=NP_688258.1;Note=identified by match to PFAM protein family HMM PF00122;gbkey=CDS;product=cation transporter E1-E2 family ATPase;protein_id=NP_688258.1;transl_table=11
NC_004116.1	RefSeq	gene	1268734	1269102	.	-	.	ID=gene1352;Dbxref=GeneID:1014065;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=SAG1258
NC_004116.1	RefSeq	CDS	1268734	1269102	.	-	0	ID=cds1223;Parent=gene1352;Dbxref=Genbank:NP_688259.1,GeneID:1014065;Name=NP_688259.1;Note=identified by match to PFAM protein family HMM PF01022;gbkey=CDS;gene=cadC;product=cadmium efflux system accessory protein;protein_id=NP_688259.1;transl_table=11
NC_004116.1	RefSeq	gene	1269305	1269604	.	+	.	ID=gene1353;Dbxref=GeneID:1014066;Name=SAG1259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1259
NC_004116.1	RefSeq	CDS	1269305	1269604	.	+	0	ID=cds1224;Parent=gene1353;Dbxref=Genbank:NP_688260.1,GeneID:1014066;Name=NP_688260.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688260.1;transl_table=11
NC_004116.1	RefSeq	gene	1269658	1270446	.	-	.	ID=gene1354;Dbxref=GeneID:1014067;Name=SAG1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1260
NC_004116.1	RefSeq	CDS	1269658	1270446	.	-	0	ID=cds1225;Parent=gene1354;Dbxref=Genbank:NP_688261.1,GeneID:1014067;Name=NP_688261.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688261.1;transl_table=11
NC_004116.1	RefSeq	gene	1270455	1271051	.	+	.	ID=gene1355;Dbxref=GeneID:1014068;Name=SAG1261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1261
NC_004116.1	RefSeq	CDS	1270455	1271051	.	+	0	ID=cds1226;Parent=gene1355;Dbxref=Genbank:NP_688262.1,GeneID:1014068;Name=NP_688262.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688262.1;transl_table=11
NC_004116.1	RefSeq	gene	1271225	1273312	.	-	.	ID=gene1356;Dbxref=GeneID:1014069;Name=SAG1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1262
NC_004116.1	RefSeq	CDS	1271225	1273312	.	-	0	ID=cds1227;Parent=gene1356;Dbxref=Genbank:NP_688263.1,GeneID:1014069;Name=NP_688263.1;Note=identified by match to PFAM protein family HMM PF00122;gbkey=CDS;product=cation transporter E1-E2 family ATPase;protein_id=NP_688263.1;transl_table=11
NC_004116.1	RefSeq	gene	1273451	1273657	.	-	.	ID=gene1357;Dbxref=GeneID:17097510;Name=SAG_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG_RS02360
NC_004116.1	RefSeq	CDS	1273451	1273657	.	-	0	ID=cds1228;Parent=gene1357;Dbxref=Genbank:YP_008592387.1,GeneID:17097510;Name=YP_008592387.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_008592387.1;transl_table=11
NC_004116.1	RefSeq	gene	1273737	1274281	.	-	.	ID=gene1358;Dbxref=GeneID:1014070;Name=SAG1263;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:EF0298%3B identified by sequence similarity%3B conserved domain protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG1263
NC_004116.1	RefSeq	gene	1274268	1274714	.	-	.	ID=gene1359;Dbxref=GeneID:1014071;Name=SAG1264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1264
NC_004116.1	RefSeq	CDS	1274268	1274714	.	-	0	ID=cds1229;Parent=gene1359;Dbxref=Genbank:NP_688264.1,GeneID:1014071;Name=NP_688264.1;Note=similar to GP:9965434%3B identified by sequence similarity;gbkey=CDS;product=transcriptional repressor CopY;protein_id=NP_688264.1;transl_table=11
NC_004116.1	RefSeq	gene	1275139	1275759	.	-	.	ID=gene1360;Dbxref=GeneID:1014072;Name=SAG1265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1265
NC_004116.1	RefSeq	CDS	1275139	1275759	.	-	0	ID=cds1230;Parent=gene1360;Dbxref=Genbank:NP_688265.1,GeneID:1014072;Name=NP_688265.1;gbkey=CDS;product=cadmium resistance transporter;protein_id=NP_688265.1;transl_table=11
NC_004116.1	RefSeq	gene	1276299	1276757	.	+	.	ID=gene1361;Dbxref=GeneID:1014073;Name=SAG1266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1266
NC_004116.1	RefSeq	CDS	1276299	1276757	.	+	0	ID=cds1231;Parent=gene1361;Dbxref=Genbank:NP_688266.1,GeneID:1014073;Name=NP_688266.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688266.1;transl_table=11
NC_004116.1	RefSeq	gene	1276791	1277117	.	+	.	ID=gene1362;Dbxref=GeneID:1014074;Name=SAG1267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1267
NC_004116.1	RefSeq	CDS	1276791	1277117	.	+	0	ID=cds1232;Parent=gene1362;Dbxref=Genbank:NP_688267.1,GeneID:1014074;Name=NP_688267.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688267.1;transl_table=11
NC_004116.1	RefSeq	gene	1277301	1277993	.	+	.	ID=gene1363;Dbxref=GeneID:1014075;Name=SAG1268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1268
NC_004116.1	RefSeq	CDS	1277301	1277993	.	+	0	ID=cds1233;Parent=gene1363;Dbxref=Genbank:NP_688268.1,GeneID:1014075;Name=NP_688268.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=repressor protein;protein_id=NP_688268.1;transl_table=11
NC_004116.1	RefSeq	gene	1277996	1278130	.	+	.	ID=gene1364;Dbxref=GeneID:1014076;Name=SAG1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1269
NC_004116.1	RefSeq	CDS	1277996	1278130	.	+	0	ID=cds1234;Parent=gene1364;Dbxref=Genbank:NP_688269.1,GeneID:1014076;Name=NP_688269.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688269.1;transl_table=11
NC_004116.1	RefSeq	gene	1278136	1279551	.	+	.	ID=gene1365;Dbxref=GeneID:1014077;Name=SAG1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1270
NC_004116.1	RefSeq	CDS	1278136	1279551	.	+	0	ID=cds1235;Parent=gene1365;Dbxref=Genbank:NP_688270.1,GeneID:1014077;Name=NP_688270.1;Note=identified by match to PFAM protein family HMM PF00817;gbkey=CDS;product=ImpB/MucB/SamB family protein;protein_id=NP_688270.1;transl_table=11
NC_004116.1	RefSeq	gene	1279548	1279898	.	+	.	ID=gene1366;Dbxref=GeneID:1014078;Name=SAG1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1271
NC_004116.1	RefSeq	CDS	1279548	1279898	.	+	0	ID=cds1236;Parent=gene1366;Dbxref=Genbank:NP_688271.1,GeneID:1014078;Name=NP_688271.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688271.1;transl_table=11
NC_004116.1	RefSeq	gene	1279885	1280193	.	+	.	ID=gene1367;Dbxref=GeneID:1014079;Name=SAG1272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1272
NC_004116.1	RefSeq	CDS	1279885	1280193	.	+	0	ID=cds1237;Parent=gene1367;Dbxref=Genbank:NP_688272.1,GeneID:1014079;Name=NP_688272.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688272.1;transl_table=11
NC_004116.1	RefSeq	gene	1280202	1280558	.	-	.	ID=gene1368;Dbxref=GeneID:1014080;Name=SAG1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1273
NC_004116.1	RefSeq	CDS	1280202	1280558	.	-	0	ID=cds1238;Parent=gene1368;Dbxref=Genbank:NP_688273.1,GeneID:1014080;Name=NP_688273.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688273.1;transl_table=11
NC_004116.1	RefSeq	gene	1280548	1280937	.	-	.	ID=gene1369;Dbxref=GeneID:1014081;Name=SAG1274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1274
NC_004116.1	RefSeq	CDS	1280548	1280937	.	-	0	ID=cds1239;Parent=gene1369;Dbxref=Genbank:NP_688274.1,GeneID:1014081;Name=NP_688274.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688274.1;transl_table=11
NC_004116.1	RefSeq	gene	1280934	1281161	.	-	.	ID=gene1370;Dbxref=GeneID:1014082;Name=SAG1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1275
NC_004116.1	RefSeq	CDS	1280934	1281161	.	-	0	ID=cds1240;Parent=gene1370;Dbxref=Genbank:NP_688275.1,GeneID:1014082;Name=NP_688275.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688275.1;transl_table=11
NC_004116.1	RefSeq	gene	1281215	1282291	.	-	.	ID=gene1371;Dbxref=GeneID:1014083;Name=SAG1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1276
NC_004116.1	RefSeq	CDS	1281215	1282291	.	-	0	ID=cds1241;Parent=gene1371;Dbxref=Genbank:NP_688276.1,GeneID:1014083;Name=NP_688276.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688276.1;transl_table=11
NC_004116.1	RefSeq	gene	1282330	1282821	.	-	.	ID=gene1372;Dbxref=GeneID:1014084;Name=SAG1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1277
NC_004116.1	RefSeq	CDS	1282330	1282821	.	-	0	ID=cds1242;Parent=gene1372;Dbxref=Genbank:NP_688277.1,GeneID:1014084;Name=NP_688277.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688277.1;transl_table=11
NC_004116.1	RefSeq	gene	1283064	1283354	.	-	.	ID=gene1373;Dbxref=GeneID:1014085;Name=SAG1278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1278
NC_004116.1	RefSeq	CDS	1283064	1283354	.	-	0	ID=cds1243;Parent=gene1373;Dbxref=Genbank:NP_688278.1,GeneID:1014085;Name=NP_688278.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688278.1;transl_table=11
NC_004116.1	RefSeq	gene	1283368	1283667	.	-	.	ID=gene1374;Dbxref=GeneID:1014086;Name=SAG1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1279
NC_004116.1	RefSeq	CDS	1283368	1283667	.	-	0	ID=cds1244;Parent=gene1374;Dbxref=Genbank:NP_688279.1,GeneID:1014086;Name=NP_688279.1;Note=similar to GP:2735477%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688279.1;transl_table=11
NC_004116.1	RefSeq	gene	1283738	1290562	.	-	.	ID=gene1375;Dbxref=GeneID:1014087;Name=SAG1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1280
NC_004116.1	RefSeq	CDS	1283738	1290562	.	-	0	ID=cds1245;Parent=gene1375;Dbxref=Genbank:NP_688280.1,GeneID:1014087;Name=NP_688280.1;Note=identified by match to PFAM protein family HMM PF00176;gbkey=CDS;product=SNF2 family protein;protein_id=NP_688280.1;transl_table=11
NC_004116.1	RefSeq	gene	1290611	1291162	.	-	.	ID=gene1376;Dbxref=GeneID:1014088;Name=SAG1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1281
NC_004116.1	RefSeq	CDS	1290611	1291162	.	-	0	ID=cds1246;Parent=gene1376;Dbxref=Genbank:NP_688281.1,GeneID:1014088;Name=NP_688281.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688281.1;transl_table=11
NC_004116.1	RefSeq	gene	1291146	1291337	.	-	.	ID=gene1377;Dbxref=GeneID:1014089;Name=SAG1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1282
NC_004116.1	RefSeq	CDS	1291146	1291337	.	-	0	ID=cds1247;Parent=gene1377;Dbxref=Genbank:NP_688282.1,GeneID:1014089;Name=NP_688282.1;Note=similar to OMNI:EF0591%3B identified by sequence similarity;gbkey=CDS;product=calcium-binding protein;protein_id=NP_688282.1;transl_table=11
NC_004116.1	RefSeq	gene	1291338	1296233	.	-	.	ID=gene1378;Dbxref=GeneID:1014090;Name=ssp-5;gbkey=Gene;gene=ssp-5;gene_biotype=protein_coding;locus_tag=SAG1283
NC_004116.1	RefSeq	CDS	1291338	1296233	.	-	0	ID=cds1248;Parent=gene1378;Dbxref=Genbank:NP_688283.1,GeneID:1014090;Name=NP_688283.1;Note=identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;gene=ssp-5;product=agglutinin receptor;protein_id=NP_688283.1;transl_table=11
NC_004116.1	RefSeq	gene	1296512	1297102	.	+	.	ID=gene1379;Dbxref=GeneID:1014091;Name=abiGI;gbkey=Gene;gene=abiGI;gene_biotype=protein_coding;locus_tag=SAG1284
NC_004116.1	RefSeq	CDS	1296512	1297102	.	+	0	ID=cds1249;Parent=gene1379;Dbxref=Genbank:NP_688284.1,GeneID:1014091;Name=NP_688284.1;Note=similar to PID:1039476%3B identified by sequence similarity;gbkey=CDS;gene=abiGI;product=abortive infection protein AbiGI;protein_id=NP_688284.1;transl_table=11
NC_004116.1	RefSeq	gene	1297099	1297944	.	+	.	ID=gene1380;Dbxref=GeneID:1014092;Name=abiGII;gbkey=Gene;gene=abiGII;gene_biotype=protein_coding;locus_tag=SAG1285
NC_004116.1	RefSeq	CDS	1297099	1297944	.	+	0	ID=cds1250;Parent=gene1380;Dbxref=Genbank:NP_688285.1,GeneID:1014092;Name=NP_688285.1;Note=similar to GP:12620628%3B identified by sequence similarity;gbkey=CDS;gene=abiGII;product=abortive infection protein AbiGII;protein_id=NP_688285.1;transl_table=11
NC_004116.1	RefSeq	gene	1298030	1300831	.	-	.	ID=gene1381;Dbxref=GeneID:1014093;Name=SAG1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1286
NC_004116.1	RefSeq	CDS	1298030	1300831	.	-	0	ID=cds1251;Parent=gene1381;Dbxref=Genbank:NP_688286.1,GeneID:1014093;Name=NP_688286.1;gbkey=CDS;product=Tn5252%2C Orf28;protein_id=NP_688286.1;transl_table=11
NC_004116.1	RefSeq	gene	1300833	1303163	.	-	.	ID=gene1382;Dbxref=GeneID:1014094;Name=SAG1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1287
NC_004116.1	RefSeq	CDS	1300833	1303163	.	-	0	ID=cds1252;Parent=gene1382;Dbxref=Genbank:NP_688287.1,GeneID:1014094;Name=NP_688287.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=Tn5252%2C Orf26;protein_id=NP_688287.1;transl_table=11
NC_004116.1	RefSeq	gene	1303141	1303494	.	-	.	ID=gene1383;Dbxref=GeneID:1014095;Name=SAG1288;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:11559693%3B identified by sequence similarity%3B Tn5252%2C Orf25%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG1288
NC_004116.1	RefSeq	gene	1303556	1304410	.	-	.	ID=gene1384;Dbxref=GeneID:1014096;Name=SAG1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1289
NC_004116.1	RefSeq	CDS	1303556	1304410	.	-	0	ID=cds1253;Parent=gene1384;Dbxref=Genbank:NP_688288.1,GeneID:1014096;Name=NP_688288.1;Note=similar to GP:11559691%3B identified by sequence similarity;gbkey=CDS;product=Tn5252%2C Orf23;protein_id=NP_688288.1;transl_table=11
NC_004116.1	RefSeq	gene	1304429	1304671	.	-	.	ID=gene1385;Dbxref=GeneID:1014097;Name=SAG1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1290
NC_004116.1	RefSeq	CDS	1304429	1304671	.	-	0	ID=cds1254;Parent=gene1385;Dbxref=Genbank:NP_688289.1,GeneID:1014097;Name=NP_688289.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688289.1;transl_table=11
NC_004116.1	RefSeq	gene	1304689	1306506	.	-	.	ID=gene1386;Dbxref=GeneID:1014098;Name=SAG1291;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF02534%3B Tn5252%2C Orf 21 protein%2C internal deletion;gbkey=Gene;gene_biotype=other;locus_tag=SAG1291
NC_004116.1	RefSeq	gene	1306506	1306994	.	-	.	ID=gene1387;Dbxref=GeneID:1014099;Name=SAG1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1292
NC_004116.1	RefSeq	CDS	1306506	1306994	.	-	0	ID=cds1255;Parent=gene1387;Dbxref=Genbank:NP_688290.1,GeneID:1014099;Name=NP_688290.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688290.1;transl_table=11
NC_004116.1	RefSeq	gene	1307071	1307655	.	-	.	ID=gene1388;Dbxref=GeneID:1014100;Name=SAG1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1293
NC_004116.1	RefSeq	CDS	1307071	1307655	.	-	0	ID=cds1256;Parent=gene1388;Dbxref=Genbank:NP_688291.1,GeneID:1014100;Name=NP_688291.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=protease;protein_id=NP_688291.1;transl_table=11
NC_004116.1	RefSeq	gene	1307658	1307891	.	-	.	ID=gene1389;Dbxref=GeneID:1014101;Name=SAG1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1294
NC_004116.1	RefSeq	CDS	1307658	1307891	.	-	0	ID=cds1257;Parent=gene1389;Dbxref=Genbank:NP_688292.1,GeneID:1014101;Name=NP_688292.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688292.1;transl_table=11
NC_004116.1	RefSeq	gene	1307900	1308283	.	-	.	ID=gene1390;Dbxref=GeneID:1014102;Name=SAG1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1295
NC_004116.1	RefSeq	CDS	1307900	1308283	.	-	0	ID=cds1258;Parent=gene1390;Dbxref=Genbank:NP_688293.1,GeneID:1014102;Name=NP_688293.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688293.1;transl_table=11
NC_004116.1	RefSeq	gene	1308294	1308722	.	-	.	ID=gene1391;Dbxref=GeneID:1014103;Name=SAG1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1296
NC_004116.1	RefSeq	CDS	1308294	1308722	.	-	0	ID=cds1259;Parent=gene1391;Dbxref=Genbank:NP_688294.1,GeneID:1014103;Name=NP_688294.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688294.1;transl_table=11
NC_004116.1	RefSeq	gene	1308706	1310061	.	-	.	ID=gene1392;Dbxref=GeneID:1014104;Name=SAG1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1297
NC_004116.1	RefSeq	CDS	1308706	1310061	.	-	0	ID=cds1260;Parent=gene1392;Dbxref=Genbank:NP_688295.1,GeneID:1014104;Name=NP_688295.1;Note=identified by match to PFAM protein family HMM PF00145;gbkey=CDS;product=C-5 cytosine-specific DNA methylase;protein_id=NP_688295.1;transl_table=11
NC_004116.1	RefSeq	gene	1310113	1310208	.	-	.	ID=gene1393;Dbxref=GeneID:1014105;Name=SAG1298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1298
NC_004116.1	RefSeq	CDS	1310113	1310208	.	-	0	ID=cds1261;Parent=gene1393;Dbxref=Genbank:NP_688296.1,GeneID:1014105;Name=NP_688296.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688296.1;transl_table=11
NC_004116.1	RefSeq	gene	1310210	1311028	.	-	.	ID=gene1394;Dbxref=GeneID:1014106;Name=SAG1299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1299
NC_004116.1	RefSeq	CDS	1310210	1311028	.	-	0	ID=cds1262;Parent=gene1394;Dbxref=Genbank:NP_688297.1,GeneID:1014106;Name=NP_688297.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688297.1;transl_table=11
NC_004116.1	RefSeq	gene	1311025	1311198	.	-	.	ID=gene1395;Dbxref=GeneID:1014107;Name=SAG1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1300
NC_004116.1	RefSeq	CDS	1311025	1311198	.	-	0	ID=cds1263;Parent=gene1395;Dbxref=Genbank:NP_688298.1,GeneID:1014107;Name=NP_688298.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688298.1;transl_table=11
NC_004116.1	RefSeq	gene	1311397	1311762	.	-	.	ID=gene1396;Dbxref=GeneID:1014108;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SAG1301
NC_004116.1	RefSeq	CDS	1311397	1311762	.	-	0	ID=cds1264;Parent=gene1396;Dbxref=Genbank:NP_688299.1,GeneID:1014108;Name=NP_688299.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=NP_688299.1;transl_table=11
NC_004116.1	RefSeq	gene	1311826	1312326	.	-	.	ID=gene1397;Dbxref=GeneID:1014109;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SAG1302
NC_004116.1	RefSeq	CDS	1311826	1312326	.	-	0	ID=cds1265;Parent=gene1397;Dbxref=Genbank:NP_688300.1,GeneID:1014109;Name=NP_688300.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=NP_688300.1;transl_table=11
NC_004116.1	RefSeq	gene	1312759	1314867	.	+	.	ID=gene1398;Dbxref=GeneID:1014110;Name=SAG1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1303
NC_004116.1	RefSeq	CDS	1312759	1314867	.	+	0	ID=cds1266;Parent=gene1398;Dbxref=Genbank:NP_688301.1,GeneID:1014110;Name=NP_688301.1;Note=identified by match to PFAM protein family HMM PF00004;gbkey=CDS;product=ATP-dependent Clp protease%2C ATP-binding subunit;protein_id=NP_688301.1;transl_table=11
NC_004116.1	RefSeq	gene	1314851	1314949	.	-	.	ID=gene1399;Dbxref=GeneID:1014111;Name=SAG1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1304
NC_004116.1	RefSeq	CDS	1314851	1314949	.	-	0	ID=cds1267;Parent=gene1399;Dbxref=Genbank:NP_688302.1,GeneID:1014111;Name=NP_688302.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688302.1;transl_table=11
NC_004116.1	RefSeq	gene	1314960	1315904	.	-	.	ID=gene1400;Dbxref=GeneID:1014112;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=SAG1305
NC_004116.1	RefSeq	CDS	1314960	1315904	.	-	0	ID=cds1268;Parent=gene1400;Dbxref=Genbank:NP_688303.1,GeneID:1014112;Name=NP_688303.1;Note=converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines;gbkey=CDS;gene=mmuM;product=homocysteine methyltransferase;protein_id=NP_688303.1;transl_table=11
NC_004116.1	RefSeq	gene	1315909	1317285	.	-	.	ID=gene1401;Dbxref=GeneID:1014113;Name=SAG1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1306
NC_004116.1	RefSeq	CDS	1315909	1317285	.	-	0	ID=cds1269;Parent=gene1401;Dbxref=Genbank:NP_688304.1,GeneID:1014113;Name=NP_688304.1;Note=identified by match to PFAM protein family HMM PF00324;gbkey=CDS;product=amino acid permease;protein_id=NP_688304.1;transl_table=11
NC_004116.1	RefSeq	gene	1317415	1318065	.	-	.	ID=gene1402;Dbxref=GeneID:1014114;Name=SAG1307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1307
NC_004116.1	RefSeq	CDS	1317415	1318065	.	-	0	ID=cds1270;Parent=gene1402;Dbxref=Genbank:NP_688305.1,GeneID:1014114;Name=NP_688305.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688305.1;transl_table=11
NC_004116.1	RefSeq	gene	1318223	1318726	.	-	.	ID=gene1403;Dbxref=GeneID:1014115;Name=SAG1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1308
NC_004116.1	RefSeq	CDS	1318223	1318726	.	-	0	ID=cds1271;Parent=gene1403;Dbxref=Genbank:NP_688306.1,GeneID:1014115;Name=NP_688306.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688306.1;transl_table=11
NC_004116.1	RefSeq	gene	1318723	1318815	.	-	.	ID=gene1404;Dbxref=GeneID:1014116;Name=SAG1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1309
NC_004116.1	RefSeq	CDS	1318723	1318815	.	-	0	ID=cds1272;Parent=gene1404;Dbxref=Genbank:NP_688307.1,GeneID:1014116;Name=NP_688307.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688307.1;transl_table=11
NC_004116.1	RefSeq	gene	1318818	1319366	.	+	.	ID=gene1405;Dbxref=GeneID:1014117;Name=SAG1310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1310
NC_004116.1	RefSeq	CDS	1318818	1319366	.	+	0	ID=cds1273;Parent=gene1405;Dbxref=Genbank:NP_688308.1,GeneID:1014117;Name=NP_688308.1;Note=identified by match to PFAM protein family HMM PF00440;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=NP_688308.1;transl_table=11
NC_004116.1	RefSeq	gene	1319428	1320024	.	-	.	ID=gene1406;Dbxref=GeneID:1014118;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;gene_synonym=yihA,ysxC;locus_tag=SAG1311
NC_004116.1	RefSeq	CDS	1319428	1320024	.	-	0	ID=cds1274;Parent=gene1406;Dbxref=Genbank:NP_688309.1,GeneID:1014118;Name=NP_688309.1;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;gbkey=CDS;gene=engB;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=NP_688309.1;transl_table=11
NC_004116.1	RefSeq	gene	1320035	1321261	.	-	.	ID=gene1407;Dbxref=GeneID:1014119;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SAG1312
NC_004116.1	RefSeq	CDS	1320035	1321261	.	-	0	ID=cds1275;Parent=gene1407;Dbxref=Genbank:NP_688310.1,GeneID:1014119;Name=NP_688310.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=NP_688310.1;transl_table=11
NC_004116.1	RefSeq	gene	1321291	1321461	.	-	.	ID=gene1408;Dbxref=GeneID:1014120;Name=SAG1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1313
NC_004116.1	RefSeq	CDS	1321291	1321461	.	-	0	ID=cds1276;Parent=gene1408;Dbxref=Genbank:NP_688311.1,GeneID:1014120;Name=NP_688311.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688311.1;transl_table=11
NC_004116.1	RefSeq	gene	1321479	1321973	.	-	.	ID=gene1409;Dbxref=GeneID:1014121;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=SAG1314
NC_004116.1	RefSeq	CDS	1321479	1321973	.	-	0	ID=cds1277;Parent=gene1409;Dbxref=Genbank:NP_688312.1,GeneID:1014121;Name=NP_688312.1;Note=identified by match to PFAM protein family HMM PF00186;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=NP_688312.1;transl_table=11
NC_004116.1	RefSeq	gene	1322053	1322892	.	-	.	ID=gene1410;Dbxref=GeneID:1014122;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=SAG1315
NC_004116.1	RefSeq	CDS	1322053	1322892	.	-	0	ID=cds1278;Parent=gene1410;Dbxref=Genbank:NP_688313.1,GeneID:1014122;Name=NP_688313.1;Note=ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived;gbkey=CDS;gene=thyA;product=thymidylate synthase;protein_id=NP_688313.1;transl_table=11
NC_004116.1	RefSeq	gene	1323046	1324218	.	+	.	ID=gene1411;Dbxref=GeneID:1014123;Name=SAG1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1316
NC_004116.1	RefSeq	CDS	1323046	1324218	.	+	0	ID=cds1279;Parent=gene1411;Dbxref=Genbank:NP_688314.1,GeneID:1014123;Name=NP_688314.1;Note=identified by match to PFAM protein family HMM PF01154;gbkey=CDS;product=HMG-CoA synthase;protein_id=NP_688314.1;transl_table=11
NC_004116.1	RefSeq	gene	1324220	1325503	.	+	.	ID=gene1412;Dbxref=GeneID:1014124;Name=SAG1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1317
NC_004116.1	RefSeq	CDS	1324220	1325503	.	+	0	ID=cds1280;Parent=gene1412;Dbxref=Genbank:NP_688315.1,GeneID:1014124;Name=NP_688315.1;Note=identified by match to PFAM protein family HMM PF00368;gbkey=CDS;product=3-hydroxy-3-methylglutaryl-CoA reductase;protein_id=NP_688315.1;transl_table=11
NC_004116.1	RefSeq	gene	1325595	1326044	.	+	.	ID=gene1413;Dbxref=GeneID:1014125;Name=SAG1318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1318
NC_004116.1	RefSeq	CDS	1325595	1326044	.	+	0	ID=cds1281;Parent=gene1413;Dbxref=Genbank:NP_688316.1,GeneID:1014125;Name=NP_688316.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688316.1;transl_table=11
NC_004116.1	RefSeq	gene	1326049	1326693	.	+	.	ID=gene1414;Dbxref=GeneID:1014126;Name=SAG1319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1319
NC_004116.1	RefSeq	CDS	1326049	1326693	.	+	0	ID=cds1282;Parent=gene1414;Dbxref=Genbank:NP_688317.1,GeneID:1014126;Name=NP_688317.1;Note=identified by match to PFAM protein family HMM PF03006;gbkey=CDS;product=hemolysin III;protein_id=NP_688317.1;transl_table=11
NC_004116.1	RefSeq	gene	1326780	1327694	.	+	.	ID=gene1415;Dbxref=GeneID:1014127;Name=SAG1320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1320
NC_004116.1	RefSeq	CDS	1326780	1327694	.	+	0	ID=cds1283;Parent=gene1415;Dbxref=Genbank:NP_688318.1,GeneID:1014127;Name=NP_688318.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688318.1;transl_table=11
NC_004116.1	RefSeq	gene	1327795	1328649	.	+	.	ID=gene1416;Dbxref=GeneID:1014128;Name=SAG1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1321
NC_004116.1	RefSeq	CDS	1327795	1328649	.	+	0	ID=cds1284;Parent=gene1416;Dbxref=Genbank:NP_688319.1,GeneID:1014128;Name=NP_688319.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688319.1;transl_table=11
NC_004116.1	RefSeq	gene	1328695	1328913	.	-	.	ID=gene1417;Dbxref=GeneID:1014129;Name=SAG1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1322
NC_004116.1	RefSeq	CDS	1328695	1328913	.	-	0	ID=cds1285;Parent=gene1417;Dbxref=Genbank:NP_688320.1,GeneID:1014129;Name=NP_688320.1;Note=similar to OMNI:SP1775%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688320.1;transl_table=11
NC_004116.1	RefSeq	gene	1328981	1329976	.	-	.	ID=gene1418;Dbxref=GeneID:1014130;Name=SAG1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1323
NC_004116.1	RefSeq	CDS	1328981	1329976	.	-	0	ID=cds1286;Parent=gene1418;Dbxref=Genbank:NP_688321.1,GeneID:1014130;Name=NP_688321.1;Note=catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate;gbkey=CDS;product=isopentenyl pyrophosphate isomerase;protein_id=NP_688321.1;transl_table=11
NC_004116.1	RefSeq	gene	1329973	1330965	.	-	.	ID=gene1419;Dbxref=GeneID:1014131;Name=SAG1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1324
NC_004116.1	RefSeq	CDS	1329973	1330965	.	-	0	ID=cds1287;Parent=gene1419;Dbxref=Genbank:NP_688322.1,GeneID:1014131;Name=NP_688322.1;Note=identified by match to TIGR protein family HMM TIGR01220;gbkey=CDS;product=phosphomevalonate kinase;protein_id=NP_688322.1;transl_table=11
NC_004116.1	RefSeq	gene	1330958	1331902	.	-	.	ID=gene1420;Dbxref=GeneID:1014132;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=SAG1325
NC_004116.1	RefSeq	CDS	1330958	1331902	.	-	0	ID=cds1288;Parent=gene1420;Dbxref=Genbank:NP_688323.1,GeneID:1014132;Name=NP_688323.1;Note=identified by match to PFAM protein family HMM PF00288;gbkey=CDS;gene=mvaD;product=diphosphomevalonate decarboxylase;protein_id=NP_688323.1;transl_table=11
NC_004116.1	RefSeq	gene	1331884	1332762	.	-	.	ID=gene1421;Dbxref=GeneID:1014133;Name=SAG1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1326
NC_004116.1	RefSeq	CDS	1331884	1332762	.	-	0	ID=cds1289;Parent=gene1421;Dbxref=Genbank:NP_688324.1,GeneID:1014133;Name=NP_688324.1;Note=identified by match to PFAM protein family HMM PF00288;gbkey=CDS;product=mevalonate kinase;protein_id=NP_688324.1;transl_table=11
NC_004116.1	RefSeq	gene	1332878	1334107	.	-	.	ID=gene1422;Dbxref=GeneID:1014134;Name=SAG1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1327
NC_004116.1	RefSeq	CDS	1332878	1334107	.	-	0	ID=cds1290;Parent=gene1422;Dbxref=Genbank:NP_688325.1,GeneID:1014134;Name=NP_688325.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_688325.1;transl_table=11
NC_004116.1	RefSeq	gene	1334107	1334793	.	-	.	ID=gene1423;Dbxref=GeneID:1014135;Name=SAG1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1328
NC_004116.1	RefSeq	CDS	1334107	1334793	.	-	0	ID=cds1291;Parent=gene1423;Dbxref=Genbank:NP_688326.1,GeneID:1014135;Name=NP_688326.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_688326.1;transl_table=11
NC_004116.1	RefSeq	gene	1334795	1335421	.	-	.	ID=gene1424;Dbxref=GeneID:1014136;Name=SAG1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1329
NC_004116.1	RefSeq	CDS	1334795	1335421	.	-	0	ID=cds1292;Parent=gene1424;Dbxref=Genbank:NP_688327.1,GeneID:1014136;Name=NP_688327.1;Note=similar to OMNI:NTL01SPL0666%3B identified by sequence similarity;gbkey=CDS;product=GTP pyrophosphokinase;protein_id=NP_688327.1;transl_table=11
NC_004116.1	RefSeq	gene	1335570	1335776	.	-	.	ID=gene1425;Dbxref=GeneID:1014137;Name=SAG1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1330
NC_004116.1	RefSeq	CDS	1335570	1335776	.	-	0	ID=cds1293;Parent=gene1425;Dbxref=Genbank:NP_688328.1,GeneID:1014137;Name=NP_688328.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688328.1;transl_table=11
NC_004116.1	RefSeq	gene	1336428	1339367	.	-	.	ID=gene1426;Dbxref=GeneID:1014138;Name=SAG1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1331
NC_004116.1	RefSeq	CDS	1336428	1339367	.	-	0	ID=cds1294;Parent=gene1426;Dbxref=Genbank:NP_688329.1,GeneID:1014138;Name=NP_688329.1;Note=identified by match to PFAM protein family HMM PF00746;gbkey=CDS;product=hypothetical protein;protein_id=NP_688329.1;transl_table=11
NC_004116.1	RefSeq	gene	1340126	1340566	.	-	.	ID=gene1427;Dbxref=GeneID:1014139;Name=SAG1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1332
NC_004116.1	RefSeq	CDS	1340126	1340566	.	-	0	ID=cds1295;Parent=gene1427;Dbxref=Genbank:NP_688330.1,GeneID:1014139;Name=NP_688330.1;Note=identified by match to PFAM protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=NP_688330.1;transl_table=11
NC_004116.1	RefSeq	gene	1340840	1342912	.	+	.	ID=gene1428;Dbxref=GeneID:1014140;Name=SAG1333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1333
NC_004116.1	RefSeq	CDS	1340840	1342912	.	+	0	ID=cds1296;Parent=gene1428;Dbxref=Genbank:NP_688331.1,GeneID:1014140;Name=NP_688331.1;Note=identified by match to PFAM protein family HMM PF00149;gbkey=CDS;product=5'-nucleotidase;protein_id=NP_688331.1;transl_table=11
NC_004116.1	RefSeq	gene	1342949	1343359	.	-	.	ID=gene1429;Dbxref=GeneID:1014141;Name=SAG1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1334
NC_004116.1	RefSeq	CDS	1342949	1343359	.	-	0	ID=cds1297;Parent=gene1429;Dbxref=Genbank:NP_688332.1,GeneID:1014141;Name=NP_688332.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;product=peptide deformylase;protein_id=NP_688332.1;transl_table=11
NC_004116.1	RefSeq	gene	1343429	1344778	.	-	.	ID=gene1430;Dbxref=GeneID:1014142;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=SAG1335
NC_004116.1	RefSeq	CDS	1343429	1344778	.	-	0	ID=cds1298;Parent=gene1430;Dbxref=Genbank:NP_688333.1,GeneID:1014142;Name=NP_688333.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;gene=gdhA;product=glutamate dehydrogenase;protein_id=NP_688333.1;transl_table=11
NC_004116.1	RefSeq	gene	1344946	1345455	.	+	.	ID=gene1431;Dbxref=GeneID:1014143;Name=SAG1336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1336
NC_004116.1	RefSeq	CDS	1344946	1345455	.	+	0	ID=cds1299;Parent=gene1431;Dbxref=Genbank:NP_688334.1,GeneID:1014143;Name=NP_688334.1;Note=identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688334.1;transl_table=11
NC_004116.1	RefSeq	gene	1345496	1347265	.	-	.	ID=gene1432;Dbxref=GeneID:1014144;Name=SAG1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1337
NC_004116.1	RefSeq	CDS	1345496	1347265	.	-	0	ID=cds1300;Parent=gene1432;Dbxref=Genbank:NP_688335.1,GeneID:1014144;Name=NP_688335.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=NP_688335.1;transl_table=11
NC_004116.1	RefSeq	gene	1347270	1349009	.	-	.	ID=gene1433;Dbxref=GeneID:1014145;Name=SAG1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1338
NC_004116.1	RefSeq	CDS	1347270	1349009	.	-	0	ID=cds1301;Parent=gene1433;Dbxref=Genbank:NP_688336.1,GeneID:1014145;Name=NP_688336.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein/permease;protein_id=NP_688336.1;transl_table=11
NC_004116.1	RefSeq	gene	1349076	1349549	.	-	.	ID=gene1434;Dbxref=GeneID:1014146;Name=SAG1339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1339
NC_004116.1	RefSeq	CDS	1349076	1349549	.	-	0	ID=cds1302;Parent=gene1434;Dbxref=Genbank:NP_688337.1,GeneID:1014146;Name=NP_688337.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688337.1;transl_table=11
NC_004116.1	RefSeq	gene	1349546	1351414	.	-	.	ID=gene1435;Dbxref=GeneID:1014147;Name=SAG1340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1340
NC_004116.1	RefSeq	CDS	1349546	1351414	.	-	0	ID=cds1303;Parent=gene1435;Dbxref=Genbank:NP_688338.1,GeneID:1014147;Name=NP_688338.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688338.1;transl_table=11
NC_004116.1	RefSeq	gene	1351425	1352633	.	-	.	ID=gene1436;Dbxref=GeneID:1014148;Name=SAG1341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1341
NC_004116.1	RefSeq	CDS	1351425	1352633	.	-	0	ID=cds1304;Parent=gene1436;Dbxref=Genbank:NP_688339.1,GeneID:1014148;Name=NP_688339.1;Note=catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA%3B these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity;gbkey=CDS;product=tRNA CCA-pyrophosphorylase;protein_id=NP_688339.1;transl_table=11
NC_004116.1	RefSeq	gene	1352818	1353666	.	-	.	ID=gene1437;Dbxref=GeneID:1014149;Name=SAG1342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1342
NC_004116.1	RefSeq	CDS	1352818	1353666	.	-	0	ID=cds1305;Parent=gene1437;Dbxref=Genbank:NP_688340.1,GeneID:1014149;Name=NP_688340.1;Note=identified by match to PFAM protein family HMM PF02645;gbkey=CDS;product=DegV family protein;protein_id=NP_688340.1;transl_table=11
NC_004116.1	RefSeq	gene	1353666	1354046	.	-	.	ID=gene1438;Dbxref=GeneID:1014150;Name=SAG1343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1343
NC_004116.1	RefSeq	CDS	1353666	1354046	.	-	0	ID=cds1306;Parent=gene1438;Dbxref=Genbank:NP_688341.1,GeneID:1014150;Name=NP_688341.1;Note=similar to OMNI:NTL01SPL0660%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688341.1;transl_table=11
NC_004116.1	RefSeq	gene	1354118	1354651	.	-	.	ID=gene1439;Dbxref=GeneID:1014151;Name=SAG1344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1344
NC_004116.1	RefSeq	CDS	1354118	1354651	.	-	0	ID=cds1307;Parent=gene1439;Dbxref=Genbank:NP_688342.1,GeneID:1014151;Name=NP_688342.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688342.1;transl_table=11
NC_004116.1	RefSeq	gene	1354702	1355196	.	-	.	ID=gene1440;Dbxref=GeneID:1014152;Name=SAG1345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1345
NC_004116.1	RefSeq	CDS	1354702	1355196	.	-	0	ID=cds1308;Parent=gene1440;Dbxref=Genbank:NP_688343.1,GeneID:1014152;Name=NP_688343.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688343.1;transl_table=11
NC_004116.1	RefSeq	gene	1355385	1357349	.	-	.	ID=gene1441;Dbxref=GeneID:1014153;Name=SAG1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1346
NC_004116.1	RefSeq	CDS	1355385	1357349	.	-	0	ID=cds1309;Parent=gene1441;Dbxref=Genbank:NP_688344.1,GeneID:1014153;Name=NP_688344.1;Note=identified by match to PFAM protein family HMM PF00359;gbkey=CDS;product=PTS system fructose specific transporter subunit IIABC;protein_id=NP_688344.1;transl_table=11
NC_004116.1	RefSeq	gene	1357346	1358257	.	-	.	ID=gene1442;Dbxref=GeneID:1014154;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=SAG1347
NC_004116.1	RefSeq	CDS	1357346	1358257	.	-	0	ID=cds1310;Parent=gene1442;Dbxref=Genbank:NP_688345.1,GeneID:1014154;Name=NP_688345.1;Note=identified by match to PFAM protein family HMM PF00294;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=NP_688345.1;transl_table=11
NC_004116.1	RefSeq	gene	1358254	1358997	.	-	.	ID=gene1443;Dbxref=GeneID:1014155;Name=lacR-1;gbkey=Gene;gene=lacR-1;gene_biotype=protein_coding;locus_tag=SAG1348
NC_004116.1	RefSeq	CDS	1358254	1358997	.	-	0	ID=cds1311;Parent=gene1443;Dbxref=Genbank:NP_688346.1,GeneID:1014155;Name=NP_688346.1;Note=identified by match to PFAM protein family HMM PF00455;gbkey=CDS;gene=lacR-1;product=lactose phosphotransferase system repressor;protein_id=NP_688346.1;transl_table=11
NC_004116.1	RefSeq	gene	1359128	1360363	.	-	.	ID=gene1444;Dbxref=GeneID:1014156;Name=SAG1349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1349
NC_004116.1	RefSeq	CDS	1359128	1360363	.	-	0	ID=cds1312;Parent=gene1444;Dbxref=Genbank:NP_688347.1,GeneID:1014156;Name=NP_688347.1;Note=identified by match to PFAM protein family HMM PF02388;gbkey=CDS;product=beta-lactam resistance factor;protein_id=NP_688347.1;transl_table=11
NC_004116.1	RefSeq	gene	1360507	1362141	.	-	.	ID=gene1445;Dbxref=GeneID:1014157;Name=SAG1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1350
NC_004116.1	RefSeq	CDS	1360507	1362141	.	-	0	ID=cds1313;Parent=gene1445;Dbxref=Genbank:NP_688348.1,GeneID:1014157;Name=NP_688348.1;Note=identified by match to TIGR protein family HMM TIGR01168;gbkey=CDS;product=surface antigen-like protein;protein_id=NP_688348.1;transl_table=11
NC_004116.1	RefSeq	gene	1362353	1363276	.	-	.	ID=gene1446;Dbxref=GeneID:1014158;Name=SAG1351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1351
NC_004116.1	RefSeq	CDS	1362353	1363276	.	-	0	ID=cds1314;Parent=gene1446;Dbxref=Genbank:NP_688349.1,GeneID:1014158;Name=NP_688349.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=NP_688349.1;transl_table=11
NC_004116.1	RefSeq	gene	1363289	1364359	.	-	.	ID=gene1447;Dbxref=GeneID:1014159;Name=SAG1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1352
NC_004116.1	RefSeq	CDS	1363289	1364359	.	-	0	ID=cds1315;Parent=gene1447;Dbxref=Genbank:NP_688350.1,GeneID:1014159;Name=NP_688350.1;Note=similar to OMNI:NTL01SPL0650%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688350.1;transl_table=11
NC_004116.1	RefSeq	gene	1364496	1365488	.	-	.	ID=gene1448;Dbxref=GeneID:1014160;Name=SAG1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1353
NC_004116.1	RefSeq	CDS	1364496	1365488	.	-	0	ID=cds1316;Parent=gene1448;Dbxref=Genbank:NP_688351.1,GeneID:1014160;Name=NP_688351.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;product=pyridine nucleotide-disulfide oxidoreductase family protein;protein_id=NP_688351.1;transl_table=11
NC_004116.1	RefSeq	gene	1365469	1366224	.	-	.	ID=gene1449;Dbxref=GeneID:1014161;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SAG1354
NC_004116.1	RefSeq	CDS	1365469	1366224	.	-	0	ID=cds1317;Parent=gene1449;Dbxref=Genbank:NP_688352.1,GeneID:1014161;Name=NP_688352.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=NP_688352.1;transl_table=11
NC_004116.1	RefSeq	gene	1366211	1366729	.	-	.	ID=gene1450;Dbxref=GeneID:1014162;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SAG1355
NC_004116.1	RefSeq	CDS	1366211	1366729	.	-	0	ID=cds1318;Parent=gene1450;Dbxref=Genbank:NP_688353.1,GeneID:1014162;Name=NP_688353.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=NP_688353.1;transl_table=11
NC_004116.1	RefSeq	gene	1366792	1366863	.	-	.	ID=gene1451;Dbxref=GeneID:1014163;Name=tRNA-Glu-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Glu-1
NC_004116.1	RefSeq	tRNA	1366792	1366863	.	-	.	ID=rna94;Parent=gene1451;Dbxref=GeneID:1014163;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	exon	1366792	1366863	.	-	.	ID=id96;Parent=rna94;Dbxref=GeneID:1014163;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	gene	1366872	1366943	.	-	.	ID=gene1452;Dbxref=GeneID:1014164;Name=tRNA-Gln-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Gln-2
NC_004116.1	RefSeq	tRNA	1366872	1366943	.	-	.	ID=rna95;Parent=gene1452;Dbxref=GeneID:1014164;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	exon	1366872	1366943	.	-	.	ID=id97;Parent=rna95;Dbxref=GeneID:1014164;gbkey=tRNA;product=tRNA-Gln
NC_004116.1	RefSeq	gene	1367051	1368562	.	-	.	ID=gene1453;Dbxref=GeneID:1014165;Name=SAG1356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1356
NC_004116.1	RefSeq	CDS	1367051	1368562	.	-	0	ID=cds1319;Parent=gene1453;Dbxref=Genbank:NP_688354.1,GeneID:1014165;Name=NP_688354.1;Note=similar to GB:U01312 PID:460083%3B identified by sequence similarity;gbkey=CDS;product=RofA family transcriptional regulator;protein_id=NP_688354.1;transl_table=11
NC_004116.1	RefSeq	gene	1368694	1368936	.	-	.	ID=gene1454;Dbxref=GeneID:1014166;Name=SAG1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1357
NC_004116.1	RefSeq	CDS	1368694	1368936	.	-	0	ID=cds1320;Parent=gene1454;Dbxref=Genbank:NP_688355.1,GeneID:1014166;Name=NP_688355.1;Note=identified by match to PFAM protein family HMM PF00013;gbkey=CDS;product=KH domain-containing protein;protein_id=NP_688355.1;transl_table=11
NC_004116.1	RefSeq	gene	1368946	1369218	.	-	.	ID=gene1455;Dbxref=GeneID:1014167;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SAG1358
NC_004116.1	RefSeq	CDS	1368946	1369218	.	-	0	ID=cds1321;Parent=gene1455;Dbxref=Genbank:NP_688356.1,GeneID:1014167;Name=NP_688356.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=NP_688356.1;transl_table=11
NC_004116.1	RefSeq	gene	1369347	1370594	.	-	.	ID=gene1456;Dbxref=GeneID:1014168;Name=SAG1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1359
NC_004116.1	RefSeq	CDS	1369347	1370594	.	-	0	ID=cds1322;Parent=gene1456;Dbxref=Genbank:NP_688357.1,GeneID:1014168;Name=NP_688357.1;Note=identified by match to PFAM protein family HMM PF02687;gbkey=CDS;product=permease;protein_id=NP_688357.1;transl_table=11
NC_004116.1	RefSeq	gene	1370609	1371319	.	-	.	ID=gene1457;Dbxref=GeneID:1014169;Name=SAG1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1360
NC_004116.1	RefSeq	CDS	1370609	1371319	.	-	0	ID=cds1323;Parent=gene1457;Dbxref=Genbank:NP_688358.1,GeneID:1014169;Name=NP_688358.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688358.1;transl_table=11
NC_004116.1	RefSeq	gene	1371322	1372566	.	-	.	ID=gene1458;Dbxref=GeneID:1014170;Name=SAG1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1361
NC_004116.1	RefSeq	CDS	1371322	1372566	.	-	0	ID=cds1324;Parent=gene1458;Dbxref=Genbank:NP_688359.1,GeneID:1014170;Name=NP_688359.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688359.1;transl_table=11
NC_004116.1	RefSeq	gene	1372768	1374366	.	-	.	ID=gene1459;Dbxref=GeneID:1014171;Name=SAG1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1362
NC_004116.1	RefSeq	CDS	1372768	1374366	.	-	0	ID=cds1325;Parent=gene1459;Dbxref=Genbank:NP_688360.1,GeneID:1014171;Name=NP_688360.1;Note=identified by match to PFAM protein family HMM PF02787;gbkey=CDS;product=carbamoyl-phosphate synthase large subunit;protein_id=NP_688360.1;transl_table=11
NC_004116.1	RefSeq	gene	1374422	1375492	.	-	.	ID=gene1460;Dbxref=GeneID:1014172;Name=carA-2;gbkey=Gene;gene=carA-2;gene_biotype=protein_coding;locus_tag=SAG1363
NC_004116.1	RefSeq	CDS	1374422	1375492	.	-	0	ID=cds1326;Parent=gene1460;Dbxref=Genbank:NP_688361.1,GeneID:1014172;Name=NP_688361.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;gene=carA-2;product=carbamoyl phosphate synthase small subunit;protein_id=NP_688361.1;transl_table=11
NC_004116.1	RefSeq	gene	1375541	1376062	.	-	.	ID=gene1461;Dbxref=GeneID:1014173;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=SAG1364
NC_004116.1	RefSeq	CDS	1375541	1376062	.	-	0	ID=cds1327;Parent=gene1461;Dbxref=Genbank:NP_688362.1,GeneID:1014173;Name=NP_688362.1;Note=regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes%2C also has been shown to have uracil phosphoribosyltransferase activity;gbkey=CDS;gene=pyrR;product=bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase;protein_id=NP_688362.1;transl_table=11
NC_004116.1	RefSeq	gene	1376238	1377128	.	-	.	ID=gene1462;Dbxref=GeneID:1014174;Name=SAG1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1365
NC_004116.1	RefSeq	CDS	1376238	1377128	.	-	0	ID=cds1328;Parent=gene1462;Dbxref=Genbank:NP_688363.1,GeneID:1014174;Name=NP_688363.1;Note=identified by match to PFAM protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=NP_688363.1;transl_table=11
NC_004116.1	RefSeq	gene	1377112	1377576	.	-	.	ID=gene1463;Dbxref=GeneID:1014175;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SAG1366
NC_004116.1	RefSeq	CDS	1377112	1377576	.	-	0	ID=cds1329;Parent=gene1463;Dbxref=Genbank:NP_688364.1,GeneID:1014175;Name=NP_688364.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=NP_688364.1;transl_table=11
NC_004116.1	RefSeq	gene	1377585	1378490	.	-	.	ID=gene1464;Dbxref=GeneID:1014176;Name=SAG1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1367
NC_004116.1	RefSeq	CDS	1377585	1378490	.	-	0	ID=cds1330;Parent=gene1464;Dbxref=Genbank:NP_688365.1,GeneID:1014176;Name=NP_688365.1;Note=identified by match to PFAM protein family HMM PF00126;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=NP_688365.1;transl_table=11
NC_004116.1	RefSeq	gene	1378706	1378990	.	-	.	ID=gene1465;Dbxref=GeneID:1014177;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SAG1368
NC_004116.1	RefSeq	CDS	1378706	1378990	.	-	0	ID=cds1331;Parent=gene1465;Dbxref=Genbank:NP_688366.1,GeneID:1014177;Name=NP_688366.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=NP_688366.1;transl_table=11
NC_004116.1	RefSeq	gene	1379021	1379359	.	-	.	ID=gene1466;Dbxref=GeneID:1014178;Name=SAG1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1369
NC_004116.1	RefSeq	CDS	1379021	1379359	.	-	0	ID=cds1332;Parent=gene1466;Dbxref=Genbank:NP_688367.1,GeneID:1014178;Name=NP_688367.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688367.1;transl_table=11
NC_004116.1	RefSeq	gene	1379366	1379680	.	-	.	ID=gene1467;Dbxref=GeneID:1014179;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SAG1370
NC_004116.1	RefSeq	CDS	1379366	1379680	.	-	0	ID=cds1333;Parent=gene1467;Dbxref=Genbank:NP_688368.1,GeneID:1014179;Name=NP_688368.1;Note=identified by match to PFAM protein family HMM PF00829;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=NP_688368.1;transl_table=11
NC_004116.1	RefSeq	gene	1379870	1381048	.	-	.	ID=gene1468;Dbxref=GeneID:1014180;Name=SAG1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1371
NC_004116.1	RefSeq	CDS	1379870	1381048	.	-	0	ID=cds1334;Parent=gene1468;Dbxref=Genbank:NP_688369.1,GeneID:1014180;Name=NP_688369.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688369.1;transl_table=11
NC_004116.1	RefSeq	gene	1381150	1382364	.	-	.	ID=gene1469;Dbxref=GeneID:1014181;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=SAG1372
NC_004116.1	RefSeq	CDS	1381150	1382364	.	-	0	ID=cds1335;Parent=gene1469;Dbxref=Genbank:NP_688370.1,GeneID:1014181;Name=NP_688370.1;Note=Required for the synthesis of the thiazole moiety;gbkey=CDS;gene=thiI;product=thiamine biosynthesis protein ThiI;protein_id=NP_688370.1;transl_table=11
NC_004116.1	RefSeq	gene	1382366	1383511	.	-	.	ID=gene1470;Dbxref=GeneID:1014182;Name=iscS-2;gbkey=Gene;gene=iscS-2;gene_biotype=protein_coding;locus_tag=SAG1373
NC_004116.1	RefSeq	CDS	1382366	1383511	.	-	0	ID=cds1336;Parent=gene1470;Dbxref=Genbank:NP_688371.1,GeneID:1014182;Name=NP_688371.1;Note=identified by match to PFAM protein family HMM PF00266;gbkey=CDS;gene=iscS-2;product=cysteine desulfurase;protein_id=NP_688371.1;transl_table=11
NC_004116.1	RefSeq	gene	1383758	1384210	.	+	.	ID=gene1471;Dbxref=GeneID:1014183;Name=SAG1374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1374
NC_004116.1	RefSeq	CDS	1383758	1384210	.	+	0	ID=cds1337;Parent=gene1471;Dbxref=Genbank:NP_688372.1,GeneID:1014183;Name=NP_688372.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688372.1;transl_table=11
NC_004116.1	RefSeq	gene	1384253	1385602	.	-	.	ID=gene1472;Dbxref=GeneID:1014184;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=SAG1375
NC_004116.1	RefSeq	CDS	1384253	1385602	.	-	0	ID=cds1338;Parent=gene1472;Dbxref=Genbank:NP_688373.1,GeneID:1014184;Name=NP_688373.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;gene=gor;product=glutathione reductase;protein_id=NP_688373.1;transl_table=11
NC_004116.1	RefSeq	gene	1385777	1386112	.	-	.	ID=gene1473;Dbxref=GeneID:1014185;Name=SAG1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1376
NC_004116.1	RefSeq	CDS	1385777	1386112	.	-	0	ID=cds1339;Parent=gene1473;Dbxref=Genbank:NP_688374.1,GeneID:1014185;Name=NP_688374.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688374.1;transl_table=11
NC_004116.1	RefSeq	gene	1386196	1387362	.	-	.	ID=gene1474;Dbxref=GeneID:1014186;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=SAG1377
NC_004116.1	RefSeq	CDS	1386196	1387362	.	-	0	ID=cds1340;Parent=gene1474;Dbxref=Genbank:NP_688375.1,GeneID:1014186;Name=NP_688375.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=NP_688375.1;transl_table=11
NC_004116.1	RefSeq	gene	1387363	1388430	.	-	.	ID=gene1475;Dbxref=GeneID:1014187;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SAG1378
NC_004116.1	RefSeq	CDS	1387363	1388430	.	-	0	ID=cds1341;Parent=gene1475;Dbxref=Genbank:NP_688376.1,GeneID:1014187;Name=NP_688376.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=NP_688376.1;transl_table=11
NC_004116.1	RefSeq	gene	1388524	1389201	.	-	.	ID=gene1476;Dbxref=GeneID:1014188;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=SAG1379
NC_004116.1	RefSeq	CDS	1388524	1389201	.	-	0	ID=cds1342;Parent=gene1476;Dbxref=Genbank:NP_688377.1,GeneID:1014188;Name=NP_688377.1;Note=catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroD;product=3-dehydroquinate dehydratase;protein_id=NP_688377.1;transl_table=11
NC_004116.1	RefSeq	gene	1389201	1390358	.	-	.	ID=gene1477;Dbxref=GeneID:1014189;Name=SAG1380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1380
NC_004116.1	RefSeq	CDS	1389201	1390358	.	-	0	ID=cds1343;Parent=gene1477;Dbxref=Genbank:NP_688378.1,GeneID:1014189;Name=NP_688378.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688378.1;transl_table=11
NC_004116.1	RefSeq	gene	1390493	1392637	.	+	.	ID=gene1478;Dbxref=GeneID:1014190;Name=SAG1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1381
NC_004116.1	RefSeq	CDS	1390493	1392637	.	+	0	ID=cds1344;Parent=gene1478;Dbxref=Genbank:NP_688379.1,GeneID:1014190;Name=NP_688379.1;Note=identified by match to PFAM protein family HMM PF00884;gbkey=CDS;product=sulfatase;protein_id=NP_688379.1;transl_table=11
NC_004116.1	RefSeq	gene	1392879	1393238	.	-	.	ID=gene1479;Dbxref=GeneID:1014191;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SAG1382
NC_004116.1	RefSeq	CDS	1392879	1393238	.	-	0	ID=cds1345;Parent=gene1479;Dbxref=Genbank:NP_688380.1,GeneID:1014191;Name=NP_688380.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=NP_688380.1;transl_table=11
NC_004116.1	RefSeq	gene	1393296	1393496	.	-	.	ID=gene1480;Dbxref=GeneID:1014192;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SAG1383
NC_004116.1	RefSeq	CDS	1393296	1393496	.	-	0	ID=cds1346;Parent=gene1480;Dbxref=Genbank:NP_688381.1,GeneID:1014192;Name=NP_688381.1;Note=identified by match to PFAM protein family HMM PF01632;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=NP_688381.1;transl_table=11
NC_004116.1	RefSeq	gene	1393536	1394066	.	-	.	ID=gene1481;Dbxref=GeneID:1014193;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=SAG1384
NC_004116.1	RefSeq	CDS	1393536	1394066	.	-	0	ID=cds1347;Parent=gene1481;Dbxref=Genbank:NP_688382.1,GeneID:1014193;Name=NP_688382.1;Note=IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=NP_688382.1;transl_table=11
NC_004116.1	RefSeq	gene	1394227	1394910	.	-	.	ID=gene1482;Dbxref=GeneID:1014194;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=SAG1385
NC_004116.1	RefSeq	CDS	1394227	1394910	.	-	0	ID=cds1348;Parent=gene1482;Dbxref=Genbank:NP_688383.1,GeneID:1014194;Name=NP_688383.1;Note=Catalyzes the formation of (d)CDP from ATP and (d)CMP;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=NP_688383.1;transl_table=11
NC_004116.1	RefSeq	gene	1394921	1395445	.	-	.	ID=gene1483;Dbxref=GeneID:1014195;Name=SAG1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1386
NC_004116.1	RefSeq	CDS	1394921	1395445	.	-	0	ID=cds1349;Parent=gene1483;Dbxref=Genbank:NP_688384.1,GeneID:1014195;Name=NP_688384.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688384.1;transl_table=11
NC_004116.1	RefSeq	gene	1395491	1395688	.	+	.	ID=gene1484;Dbxref=GeneID:1014196;Name=SAG1387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1387
NC_004116.1	RefSeq	CDS	1395491	1395688	.	+	0	ID=cds1350;Parent=gene1484;Dbxref=Genbank:NP_688385.1,GeneID:1014196;Name=NP_688385.1;gbkey=CDS;product=ferredoxin%2C 4Fe-4S;protein_id=NP_688385.1;transl_table=11
NC_004116.1	RefSeq	gene	1395675	1396166	.	-	.	ID=gene1485;Dbxref=GeneID:1014197;Name=SAG1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1388
NC_004116.1	RefSeq	CDS	1395675	1396166	.	-	0	ID=cds1351;Parent=gene1485;Dbxref=Genbank:NP_688386.1,GeneID:1014197;Name=NP_688386.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688386.1;transl_table=11
NC_004116.1	RefSeq	gene	1396195	1397415	.	-	.	ID=gene1486;Dbxref=GeneID:1014198;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=SAG1389
NC_004116.1	RefSeq	CDS	1396195	1397415	.	-	0	ID=cds1352;Parent=gene1486;Dbxref=Genbank:NP_688387.1,GeneID:1014198;Name=NP_688387.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=NP_688387.1;transl_table=11
NC_004116.1	RefSeq	gene	1397550	1399184	.	-	.	ID=gene1487;Dbxref=GeneID:1014199;Name=SAG1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1390
NC_004116.1	RefSeq	CDS	1397550	1399184	.	-	0	ID=cds1353;Parent=gene1487;Dbxref=Genbank:NP_688388.1,GeneID:1014199;Name=NP_688388.1;Note=identified by match to PFAM protein family HMM PF01943;gbkey=CDS;product=polysaccharide biosynthesis protein;protein_id=NP_688388.1;transl_table=11
NC_004116.1	RefSeq	gene	1399308	1400762	.	+	.	ID=gene1488;Dbxref=GeneID:1014200;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SAG1391
NC_004116.1	RefSeq	CDS	1399308	1400762	.	+	0	ID=cds1354;Parent=gene1488;Dbxref=Genbank:NP_688389.1,GeneID:1014200;Name=NP_688389.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase;protein_id=NP_688389.1;transl_table=11
NC_004116.1	RefSeq	gene	1400918	1401712	.	+	.	ID=gene1489;Dbxref=GeneID:1014201;Name=SAG1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1392
NC_004116.1	RefSeq	CDS	1400918	1401712	.	+	0	ID=cds1355;Parent=gene1489;Dbxref=Genbank:NP_688390.1,GeneID:1014201;Name=NP_688390.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=NP_688390.1;transl_table=11
NC_004116.1	RefSeq	gene	1401736	1402668	.	+	.	ID=gene1490;Dbxref=GeneID:1014202;Name=SAG1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1393
NC_004116.1	RefSeq	CDS	1401736	1402668	.	+	0	ID=cds1356;Parent=gene1490;Dbxref=Genbank:NP_688391.1,GeneID:1014202;Name=NP_688391.1;Note=identified by match to PFAM protein family HMM PF01497;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=NP_688391.1;transl_table=11
NC_004116.1	RefSeq	gene	1402684	1403709	.	+	.	ID=gene1491;Dbxref=GeneID:1014203;Name=SAG1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1394
NC_004116.1	RefSeq	CDS	1402684	1403709	.	+	0	ID=cds1357;Parent=gene1491;Dbxref=Genbank:NP_688392.1,GeneID:1014203;Name=NP_688392.1;Note=identified by match to PFAM protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=NP_688392.1;transl_table=11
NC_004116.1	RefSeq	gene	1403706	1404707	.	+	.	ID=gene1492;Dbxref=GeneID:1014204;Name=SAG1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1395
NC_004116.1	RefSeq	CDS	1403706	1404707	.	+	0	ID=cds1358;Parent=gene1492;Dbxref=Genbank:NP_688393.1,GeneID:1014204;Name=NP_688393.1;Note=identified by match to PFAM protein family HMM PF01032;gbkey=CDS;product=iron ABC transporter permease;protein_id=NP_688393.1;transl_table=11
NC_004116.1	RefSeq	gene	1404736	1405389	.	-	.	ID=gene1493;Dbxref=GeneID:1014205;Name=SAG1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1396
NC_004116.1	RefSeq	CDS	1404736	1405389	.	-	0	ID=cds1359;Parent=gene1493;Dbxref=Genbank:NP_688394.1,GeneID:1014205;Name=NP_688394.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688394.1;transl_table=11
NC_004116.1	RefSeq	gene	1405449	1406384	.	-	.	ID=gene1494;Dbxref=GeneID:1014206;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=SAG1397
NC_004116.1	RefSeq	CDS	1405449	1406384	.	-	0	ID=cds1360;Parent=gene1494;Dbxref=Genbank:NP_688395.1,GeneID:1014206;Name=NP_688395.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;gene=ppa;product=manganese-dependent inorganic pyrophosphatase;protein_id=NP_688395.1;transl_table=11
NC_004116.1	RefSeq	gene	1406501	1407289	.	-	.	ID=gene1495;Dbxref=GeneID:1014207;Name=pflA-2;gbkey=Gene;gene=pflA-2;gene_biotype=protein_coding;locus_tag=SAG1398
NC_004116.1	RefSeq	CDS	1406501	1407289	.	-	0	ID=cds1361;Parent=gene1495;Dbxref=Genbank:NP_688396.1,GeneID:1014207;Name=NP_688396.1;Note=identified by match to PFAM protein family HMM PF02143;gbkey=CDS;gene=pflA-2;product=pyruvate formate-lyase-activating enzyme;protein_id=NP_688396.1;transl_table=11
NC_004116.1	RefSeq	gene	1407357	1408691	.	-	.	ID=gene1496;Dbxref=GeneID:1014208;Name=SAG1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1399
NC_004116.1	RefSeq	CDS	1407357	1408691	.	-	0	ID=cds1362;Parent=gene1496;Dbxref=Genbank:NP_688397.1,GeneID:1014208;Name=NP_688397.1;Note=identified by match to PFAM protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=NP_688397.1;transl_table=11
NC_004116.1	RefSeq	gene	1408871	1409437	.	-	.	ID=gene1497;Dbxref=GeneID:1014209;Name=SAG1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1400
NC_004116.1	RefSeq	CDS	1408871	1409437	.	-	0	ID=cds1363;Parent=gene1497;Dbxref=Genbank:NP_688398.1,GeneID:1014209;Name=NP_688398.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688398.1;transl_table=11
NC_004116.1	RefSeq	gene	1409430	1410365	.	-	.	ID=gene1498;Dbxref=GeneID:1014210;Name=SAG1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1401
NC_004116.1	RefSeq	CDS	1409430	1410365	.	-	0	ID=cds1364;Parent=gene1498;Dbxref=Genbank:NP_688399.1,GeneID:1014210;Name=NP_688399.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688399.1;transl_table=11
NC_004116.1	RefSeq	gene	1410458	1411099	.	-	.	ID=gene1499;Dbxref=GeneID:1014211;Name=SAG1402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1402
NC_004116.1	RefSeq	CDS	1410458	1411099	.	-	0	ID=cds1365;Parent=gene1499;Dbxref=Genbank:NP_688400.1,GeneID:1014211;Name=NP_688400.1;Note=identified by match to PFAM protein family HMM PF01569;gbkey=CDS;product=PAP2 family protein;protein_id=NP_688400.1;transl_table=11
NC_004116.1	RefSeq	gene	1411080	1411664	.	-	.	ID=gene1500;Dbxref=GeneID:1014212;Name=SAG1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1403
NC_004116.1	RefSeq	CDS	1411080	1411664	.	-	0	ID=cds1366;Parent=gene1500;Dbxref=Genbank:NP_688401.1,GeneID:1014212;Name=NP_688401.1;Note=similar to OMNI:NTL01SPL0281%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688401.1;transl_table=11
NC_004116.1	RefSeq	gene	1411965	1412891	.	-	.	ID=gene1501;Dbxref=GeneID:1014213;Name=SAG1404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1404
NC_004116.1	RefSeq	CDS	1411965	1412891	.	-	0	ID=cds1367;Parent=gene1501;Dbxref=Genbank:NP_688402.1,GeneID:1014213;Name=NP_688402.1;Note=identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688402.1;transl_table=11
NC_004116.1	RefSeq	gene	1412888	1413772	.	-	.	ID=gene1502;Dbxref=GeneID:1014214;Name=SAG1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1405
NC_004116.1	RefSeq	CDS	1412888	1413772	.	-	0	ID=cds1368;Parent=gene1502;Dbxref=Genbank:NP_688403.1,GeneID:1014214;Name=NP_688403.1;Note=identified by match to TIGR protein family HMM TIGR01076%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=sortase family protein;protein_id=NP_688403.1;transl_table=11
NC_004116.1	RefSeq	gene	1413772	1414653	.	-	.	ID=gene1503;Dbxref=GeneID:1014215;Name=SAG1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1406
NC_004116.1	RefSeq	CDS	1413772	1414653	.	-	0	ID=cds1369;Parent=gene1503;Dbxref=Genbank:NP_688404.1,GeneID:1014215;Name=NP_688404.1;Note=identified by match to TIGR protein family HMM TIGR01076;gbkey=CDS;product=sortase family protein;protein_id=NP_688404.1;transl_table=11
NC_004116.1	RefSeq	gene	1414765	1416882	.	-	.	ID=gene1504;Dbxref=GeneID:1014216;Name=SAG1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1407
NC_004116.1	RefSeq	CDS	1414765	1416882	.	-	0	ID=cds1370;Parent=gene1504;Dbxref=Genbank:NP_688405.1,GeneID:1014216;Name=NP_688405.1;Note=identified by match to TIGR protein family HMM TIGR01167%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688405.1;transl_table=11
NC_004116.1	RefSeq	gene	1417012	1419717	.	-	.	ID=gene1505;Dbxref=GeneID:1014217;Name=SAG1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1408
NC_004116.1	RefSeq	CDS	1417012	1419717	.	-	0	ID=cds1371;Parent=gene1505;Dbxref=Genbank:NP_688406.1,GeneID:1014217;Name=NP_688406.1;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688406.1;transl_table=11
NC_004116.1	RefSeq	gene	1419999	1421527	.	+	.	ID=gene1506;Dbxref=GeneID:1014218;Name=rogB;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to GP:1289510%3B identified by sequence similarity%3B rogB protein%2C authentic frameshift;gbkey=Gene;gene=rogB;gene_biotype=other;locus_tag=SAG1409
NC_004116.1	RefSeq	gene	1421579	1422718	.	-	.	ID=gene1507;Dbxref=GeneID:1014219;Name=SAG1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1410
NC_004116.1	RefSeq	CDS	1421579	1422718	.	-	0	ID=cds1372;Parent=gene1507;Dbxref=Genbank:NP_688407.1,GeneID:1014219;Name=NP_688407.1;Note=identified by match to PFAM protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=NP_688407.1;transl_table=11
NC_004116.1	RefSeq	gene	1422708	1423556	.	-	.	ID=gene1508;Dbxref=GeneID:1014220;Name=SAG1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1411
NC_004116.1	RefSeq	CDS	1422708	1423556	.	-	0	ID=cds1373;Parent=gene1508;Dbxref=Genbank:NP_688408.1,GeneID:1014220;Name=NP_688408.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688408.1;transl_table=11
NC_004116.1	RefSeq	gene	1423553	1424977	.	-	.	ID=gene1509;Dbxref=GeneID:1014221;Name=SAG1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1412
NC_004116.1	RefSeq	CDS	1423553	1424977	.	-	0	ID=cds1374;Parent=gene1509;Dbxref=Genbank:NP_688409.1,GeneID:1014221;Name=NP_688409.1;Note=identified by match to PFAM protein family HMM PF01943;gbkey=CDS;product=polysaccharide biosynthesis protein;protein_id=NP_688409.1;transl_table=11
NC_004116.1	RefSeq	gene	1424977	1426341	.	-	.	ID=gene1510;Dbxref=GeneID:1014222;Name=SAG1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1413
NC_004116.1	RefSeq	CDS	1424977	1426341	.	-	0	ID=cds1375;Parent=gene1510;Dbxref=Genbank:NP_688410.1,GeneID:1014222;Name=NP_688410.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688410.1;transl_table=11
NC_004116.1	RefSeq	gene	1426343	1427269	.	-	.	ID=gene1511;Dbxref=GeneID:1014223;Name=SAG1414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1414
NC_004116.1	RefSeq	CDS	1426343	1427269	.	-	0	ID=cds1376;Parent=gene1511;Dbxref=Genbank:NP_688411.1,GeneID:1014223;Name=NP_688411.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688411.1;transl_table=11
NC_004116.1	RefSeq	gene	1427299	1428234	.	-	.	ID=gene1512;Dbxref=GeneID:1014224;Name=SAG1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1415
NC_004116.1	RefSeq	CDS	1427299	1428234	.	-	0	ID=cds1377;Parent=gene1512;Dbxref=Genbank:NP_688412.1,GeneID:1014224;Name=NP_688412.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688412.1;transl_table=11
NC_004116.1	RefSeq	gene	1428236	1429294	.	-	.	ID=gene1513;Dbxref=GeneID:1014225;Name=SAG1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1416
NC_004116.1	RefSeq	CDS	1428236	1429294	.	-	0	ID=cds1378;Parent=gene1513;Dbxref=Genbank:NP_688413.1,GeneID:1014225;Name=NP_688413.1;gbkey=CDS;product=nucleotide sugar dehydratase;protein_id=NP_688413.1;transl_table=11
NC_004116.1	RefSeq	gene	1429294	1430016	.	-	.	ID=gene1514;Dbxref=GeneID:1014226;Name=SAG1417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1417
NC_004116.1	RefSeq	CDS	1429294	1430016	.	-	0	ID=cds1379;Parent=gene1514;Dbxref=Genbank:NP_688414.1,GeneID:1014226;Name=NP_688414.1;Note=identified by match to PFAM protein family HMM PF01128;gbkey=CDS;product=nucleotidyl transferase;protein_id=NP_688414.1;transl_table=11
NC_004116.1	RefSeq	gene	1430016	1430840	.	-	.	ID=gene1515;Dbxref=GeneID:1014227;Name=SAG1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1418
NC_004116.1	RefSeq	CDS	1430016	1430840	.	-	0	ID=cds1380;Parent=gene1515;Dbxref=Genbank:NP_688415.1,GeneID:1014227;Name=NP_688415.1;Note=similar to OMNI:EF2168%3B identified by sequence similarity;gbkey=CDS;product=polysaccharide biosynthesis protein;protein_id=NP_688415.1;transl_table=11
NC_004116.1	RefSeq	gene	1430865	1432598	.	-	.	ID=gene1516;Dbxref=GeneID:1014228;Name=SAG1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1419
NC_004116.1	RefSeq	CDS	1430865	1432598	.	-	0	ID=cds1381;Parent=gene1516;Dbxref=Genbank:NP_688416.1,GeneID:1014228;Name=NP_688416.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688416.1;transl_table=11
NC_004116.1	RefSeq	gene	1432591	1432944	.	-	.	ID=gene1517;Dbxref=GeneID:1014229;Name=SAG1420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1420
NC_004116.1	RefSeq	CDS	1432591	1432944	.	-	0	ID=cds1382;Parent=gene1517;Dbxref=Genbank:NP_688417.1,GeneID:1014229;Name=NP_688417.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688417.1;transl_table=11
NC_004116.1	RefSeq	gene	1432941	1433672	.	-	.	ID=gene1518;Dbxref=GeneID:1014230;Name=SAG1421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1421
NC_004116.1	RefSeq	CDS	1432941	1433672	.	-	0	ID=cds1383;Parent=gene1518;Dbxref=Genbank:NP_688418.1,GeneID:1014230;Name=NP_688418.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688418.1;transl_table=11
NC_004116.1	RefSeq	gene	1433674	1434615	.	-	.	ID=gene1519;Dbxref=GeneID:1014231;Name=SAG1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1422
NC_004116.1	RefSeq	CDS	1433674	1434615	.	-	0	ID=cds1384;Parent=gene1519;Dbxref=Genbank:NP_688419.1,GeneID:1014231;Name=NP_688419.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688419.1;transl_table=11
NC_004116.1	RefSeq	gene	1434605	1435759	.	-	.	ID=gene1520;Dbxref=GeneID:1014232;Name=SAG1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1423
NC_004116.1	RefSeq	CDS	1434605	1435759	.	-	0	ID=cds1385;Parent=gene1520;Dbxref=Genbank:NP_688420.1,GeneID:1014232;Name=NP_688420.1;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688420.1;transl_table=11
NC_004116.1	RefSeq	gene	1435876	1436730	.	-	.	ID=gene1521;Dbxref=GeneID:1014233;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=SAG1424
NC_004116.1	RefSeq	CDS	1435876	1436730	.	-	0	ID=cds1386;Parent=gene1521;Dbxref=Genbank:NP_688421.1,GeneID:1014233;Name=NP_688421.1;Note=identified by match to TIGR protein family HMM TIGR01214;gbkey=CDS;gene=rfbD;product=dTDP-4-dehydrorhamnose reductase;protein_id=NP_688421.1;transl_table=11
NC_004116.1	RefSeq	gene	1436820	1437161	.	-	.	ID=gene1522;Dbxref=GeneID:1014234;Name=SAG1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1425
NC_004116.1	RefSeq	CDS	1436820	1437161	.	-	0	ID=cds1387;Parent=gene1522;Dbxref=Genbank:NP_688422.1,GeneID:1014234;Name=NP_688422.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688422.1;transl_table=11
NC_004116.1	RefSeq	gene	1437270	1438379	.	-	.	ID=gene1523;Dbxref=GeneID:1014235;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=SAG1426
NC_004116.1	RefSeq	CDS	1437270	1438379	.	-	0	ID=cds1388;Parent=gene1523;Dbxref=Genbank:NP_688423.1,GeneID:1014235;Name=NP_688423.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B primary sigma factor of bacterium;gbkey=CDS;gene=rpoD;product=RNA polymerase sigma factor RpoD;protein_id=NP_688423.1;transl_table=11
NC_004116.1	RefSeq	gene	1438387	1440195	.	-	.	ID=gene1524;Dbxref=GeneID:1014236;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SAG1427
NC_004116.1	RefSeq	CDS	1438387	1440195	.	-	0	ID=cds1389;Parent=gene1524;Dbxref=Genbank:NP_688424.1,GeneID:1014236;Name=NP_688424.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=NP_688424.1;transl_table=11
NC_004116.1	RefSeq	gene	1440385	1440762	.	+	.	ID=gene1525;Dbxref=GeneID:1014237;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=SAG1428
NC_004116.1	RefSeq	CDS	1440385	1440762	.	+	0	ID=cds1390;Parent=gene1525;Dbxref=Genbank:NP_688425.1,GeneID:1014237;Name=NP_688425.1;Note=identified by match to PFAM protein family HMM PF01741;gbkey=CDS;gene=mscL;product=large conductance mechanosensitive channel protein;protein_id=NP_688425.1;transl_table=11
NC_004116.1	RefSeq	gene	1440859	1441035	.	-	.	ID=gene1526;Dbxref=GeneID:1014238;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SAG1429
NC_004116.1	RefSeq	CDS	1440859	1441035	.	-	0	ID=cds1391;Parent=gene1526;Dbxref=Genbank:NP_688426.1,GeneID:1014238;Name=NP_688426.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=NP_688426.1;transl_table=11
NC_004116.1	RefSeq	gene	1441139	1441642	.	-	.	ID=gene1527;Dbxref=GeneID:1014239;Name=SAG1430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1430
NC_004116.1	RefSeq	CDS	1441139	1441642	.	-	0	ID=cds1392;Parent=gene1527;Dbxref=Genbank:NP_688427.1,GeneID:1014239;Name=NP_688427.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688427.1;transl_table=11
NC_004116.1	RefSeq	gene	1441725	1442531	.	-	.	ID=gene1528;Dbxref=GeneID:1014240;Name=SAG1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1431
NC_004116.1	RefSeq	CDS	1441725	1442531	.	-	0	ID=cds1393;Parent=gene1528;Dbxref=Genbank:NP_688428.1,GeneID:1014240;Name=NP_688428.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter amino acid-binding protein;protein_id=NP_688428.1;transl_table=11
NC_004116.1	RefSeq	gene	1442856	1443899	.	-	.	ID=gene1529;Dbxref=GeneID:1014241;Name=SAG1432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1432
NC_004116.1	RefSeq	CDS	1442856	1443899	.	-	0	ID=cds1394;Parent=gene1529;Dbxref=Genbank:NP_688429.1,GeneID:1014241;Name=NP_688429.1;Note=identified by match to PFAM protein family HMM PF00909;gbkey=CDS;product=ammonium transporter;protein_id=NP_688429.1;transl_table=11
NC_004116.1	RefSeq	gene	1443979	1445106	.	+	.	ID=gene1530;Dbxref=GeneID:1014242;Name=SAG1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1433
NC_004116.1	RefSeq	CDS	1443979	1445106	.	+	0	ID=cds1395;Parent=gene1530;Dbxref=Genbank:NP_688430.1,GeneID:1014242;Name=NP_688430.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688430.1;transl_table=11
NC_004116.1	RefSeq	gene	1445143	1446129	.	-	.	ID=gene1531;Dbxref=GeneID:1014243;Name=SAG1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1434
NC_004116.1	RefSeq	CDS	1445143	1446129	.	-	0	ID=cds1396;Parent=gene1531;Dbxref=Genbank:NP_688431.1,GeneID:1014243;Name=NP_688431.1;Note=identified by match to PFAM protein family HMM PF00581;gbkey=CDS;product=hypothetical protein;protein_id=NP_688431.1;transl_table=11
NC_004116.1	RefSeq	gene	1446292	1446597	.	+	.	ID=gene1532;Dbxref=GeneID:1014244;Name=SAG1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1435
NC_004116.1	RefSeq	CDS	1446292	1446597	.	+	0	ID=cds1397;Parent=gene1532;Dbxref=Genbank:NP_688432.1,GeneID:1014244;Name=NP_688432.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688432.1;transl_table=11
NC_004116.1	RefSeq	gene	1446755	1448128	.	-	.	ID=gene1533;Dbxref=GeneID:1014245;Name=SAG1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1436
NC_004116.1	RefSeq	CDS	1446755	1448128	.	-	0	ID=cds1398;Parent=gene1533;Dbxref=Genbank:NP_688433.1,GeneID:1014245;Name=NP_688433.1;gbkey=CDS;product=glycerol-3-phosphate transporter;protein_id=NP_688433.1;transl_table=11
NC_004116.1	RefSeq	gene	1448236	1448403	.	+	.	ID=gene1534;Dbxref=GeneID:1014246;Name=SAG1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1437
NC_004116.1	RefSeq	CDS	1448236	1448403	.	+	0	ID=cds1399;Parent=gene1534;Dbxref=Genbank:NP_688434.1,GeneID:1014246;Name=NP_688434.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688434.1;transl_table=11
NC_004116.1	RefSeq	gene	1448544	1450808	.	-	.	ID=gene1535;Dbxref=GeneID:1014247;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=SAG1438
NC_004116.1	RefSeq	CDS	1448544	1450808	.	-	0	ID=cds1400;Parent=gene1535;Dbxref=Genbank:NP_688435.1,GeneID:1014247;Name=NP_688435.1;Note=identified by match to PFAM protein family HMM PF00343;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=NP_688435.1;transl_table=11
NC_004116.1	RefSeq	gene	1450820	1452316	.	-	.	ID=gene1536;Dbxref=GeneID:1014248;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=SAG1439
NC_004116.1	RefSeq	CDS	1450820	1452316	.	-	0	ID=cds1401;Parent=gene1536;Dbxref=Genbank:NP_688436.1,GeneID:1014248;Name=NP_688436.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=NP_688436.1;transl_table=11
NC_004116.1	RefSeq	gene	1452437	1453465	.	-	.	ID=gene1537;Dbxref=GeneID:1014249;Name=SAG1440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1440
NC_004116.1	RefSeq	CDS	1452437	1453465	.	-	0	ID=cds1402;Parent=gene1537;Dbxref=Genbank:NP_688437.1,GeneID:1014249;Name=NP_688437.1;Note=identified by match to PFAM protein family HMM PF00356;gbkey=CDS;product=maltose operon repressor MalR;protein_id=NP_688437.1;transl_table=11
NC_004116.1	RefSeq	gene	1453721	1454968	.	+	.	ID=gene1538;Dbxref=GeneID:1014250;Name=SAG1441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1441
NC_004116.1	RefSeq	CDS	1453721	1454968	.	+	0	ID=cds1403;Parent=gene1538;Dbxref=Genbank:NP_688438.1,GeneID:1014250;Name=NP_688438.1;Note=identified by match to PFAM protein family HMM PF01547;gbkey=CDS;product=maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein;protein_id=NP_688438.1;transl_table=11
NC_004116.1	RefSeq	gene	1455066	1456436	.	+	.	ID=gene1539;Dbxref=GeneID:1014251;Name=SAG1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1442
NC_004116.1	RefSeq	CDS	1455066	1456436	.	+	0	ID=cds1404;Parent=gene1539;Dbxref=Genbank:NP_688439.1,GeneID:1014251;Name=NP_688439.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=maltose ABC transporter permease;protein_id=NP_688439.1;transl_table=11
NC_004116.1	RefSeq	gene	1456436	1457272	.	+	.	ID=gene1540;Dbxref=GeneID:1014252;Name=SAG1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1443
NC_004116.1	RefSeq	CDS	1456436	1457272	.	+	0	ID=cds1405;Parent=gene1540;Dbxref=Genbank:NP_688440.1,GeneID:1014252;Name=NP_688440.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=maltose ABC transporter permease;protein_id=NP_688440.1;transl_table=11
NC_004116.1	RefSeq	gene	1457503	1458975	.	+	.	ID=gene1541;Dbxref=GeneID:1014253;Name=SAG1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1444
NC_004116.1	RefSeq	CDS	1457503	1458975	.	+	0	ID=cds1406;Parent=gene1541;Dbxref=Genbank:NP_688441.1,GeneID:1014253;Name=NP_688441.1;Note=identified by match to PFAM protein family HMM PF00854;gbkey=CDS;product=proton/peptide symporter family protein;protein_id=NP_688441.1;transl_table=11
NC_004116.1	RefSeq	gene	1459020	1459473	.	-	.	ID=gene1542;Dbxref=GeneID:1014254;Name=SAG1445;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:SP1235%3B identified by sequence similarity%3B MutT/nudix family protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG1445
NC_004116.1	RefSeq	gene	1459557	1459745	.	-	.	ID=gene1543;Dbxref=GeneID:1014255;Name=SAG1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1446
NC_004116.1	RefSeq	CDS	1459557	1459745	.	-	0	ID=cds1407;Parent=gene1543;Dbxref=Genbank:NP_688442.1,GeneID:1014255;Name=NP_688442.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688442.1;transl_table=11
NC_004116.1	RefSeq	gene	1459756	1461081	.	-	.	ID=gene1544;Dbxref=GeneID:1014256;Name=SAG1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1447
NC_004116.1	RefSeq	CDS	1459756	1461081	.	-	0	ID=cds1408;Parent=gene1544;Dbxref=Genbank:NP_688443.1,GeneID:1014256;Name=NP_688443.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688443.1;transl_table=11
NC_004116.1	RefSeq	gene	1461074	1462582	.	-	.	ID=gene1545;Dbxref=GeneID:1014257;Name=SAG1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1448
NC_004116.1	RefSeq	CDS	1461074	1462582	.	-	0	ID=cds1409;Parent=gene1545;Dbxref=Genbank:NP_688444.1,GeneID:1014257;Name=NP_688444.1;Note=identified by match to PFAM protein family HMM PF00534;gbkey=CDS;product=glycoside hydrolase family protein;protein_id=NP_688444.1;transl_table=11
NC_004116.1	RefSeq	gene	1462596	1464983	.	-	.	ID=gene1546;Dbxref=GeneID:1014258;Name=azi;gbkey=Gene;gene=azi;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SAG1449
NC_004116.1	RefSeq	CDS	1462596	1464983	.	-	0	ID=cds1410;Parent=gene1546;Dbxref=Genbank:NP_688445.1,GeneID:1014258;Name=NP_688445.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B in some organisms%2C especially gram positive pathogens%2C have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins;gbkey=CDS;gene=azi;product=preprotein translocase subunit SecA;protein_id=NP_688445.1;transl_table=11
NC_004116.1	RefSeq	gene	1464970	1465962	.	-	.	ID=gene1547;Dbxref=GeneID:1014259;Name=SAG1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1450
NC_004116.1	RefSeq	CDS	1464970	1465962	.	-	0	ID=cds1411;Parent=gene1547;Dbxref=Genbank:NP_688446.1,GeneID:1014259;Name=NP_688446.1;Note=similar to OMNI:SP1760%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688446.1;transl_table=11
NC_004116.1	RefSeq	gene	1465959	1467443	.	-	.	ID=gene1548;Dbxref=GeneID:1014260;Name=SAG1451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1451
NC_004116.1	RefSeq	CDS	1465959	1467443	.	-	0	ID=cds1412;Parent=gene1548;Dbxref=Genbank:NP_688447.1,GeneID:1014260;Name=NP_688447.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688447.1;transl_table=11
NC_004116.1	RefSeq	gene	1467525	1469069	.	-	.	ID=gene1549;Dbxref=GeneID:1014261;Name=SAG1452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1452
NC_004116.1	RefSeq	CDS	1467525	1469069	.	-	0	ID=cds1413;Parent=gene1549;Dbxref=Genbank:NP_688448.1,GeneID:1014261;Name=NP_688448.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688448.1;transl_table=11
NC_004116.1	RefSeq	gene	1469069	1470298	.	-	.	ID=gene1550;Dbxref=GeneID:1014262;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SAG1453
NC_004116.1	RefSeq	CDS	1469069	1470298	.	-	0	ID=cds1414;Parent=gene1550;Dbxref=Genbank:NP_688449.1,GeneID:1014262;Name=NP_688449.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=NP_688449.1;transl_table=11
NC_004116.1	RefSeq	gene	1470422	1471618	.	-	.	ID=gene1551;Dbxref=GeneID:1014263;Name=SAG1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1454
NC_004116.1	RefSeq	CDS	1470422	1471618	.	-	0	ID=cds1415;Parent=gene1551;Dbxref=Genbank:NP_688450.1,GeneID:1014263;Name=NP_688450.1;Note=similar to GP:13346801%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688450.1;transl_table=11
NC_004116.1	RefSeq	gene	1471679	1472566	.	-	.	ID=gene1552;Dbxref=GeneID:1014264;Name=SAG1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1455
NC_004116.1	RefSeq	CDS	1471679	1472566	.	-	0	ID=cds1416;Parent=gene1552;Dbxref=Genbank:NP_688451.1,GeneID:1014264;Name=NP_688451.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688451.1;transl_table=11
NC_004116.1	RefSeq	gene	1472547	1473485	.	-	.	ID=gene1553;Dbxref=GeneID:1014265;Name=SAG1456;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B This gene is interrupted by an IS element%2C and contains a frameshift.%3B glycosyl transferase%2C family 8%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG1456
NC_004116.1	RefSeq	gene	1473647	1474036	.	-	.	ID=gene1554;Dbxref=GeneID:1014266;Name=SAG1457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1457
NC_004116.1	RefSeq	CDS	1473647	1474036	.	-	0	ID=cds1417;Parent=gene1554;Dbxref=Genbank:NP_688452.1,GeneID:1014266;Name=NP_688452.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1381 transposase protein B;protein_id=NP_688452.1;transl_table=11
NC_004116.1	RefSeq	gene	1474069	1474452	.	-	.	ID=gene1555;Dbxref=GeneID:1014267;Name=SAG1458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1458
NC_004116.1	RefSeq	CDS	1474069	1474452	.	-	0	ID=cds1418;Parent=gene1555;Dbxref=Genbank:NP_688453.1,GeneID:1014267;Name=NP_688453.1;Note=similar to OMNI:SP0537%3B identified by sequence similarity;gbkey=CDS;product=IS1381 transposase protein A;protein_id=NP_688453.1;transl_table=11
NC_004116.1	RefSeq	gene	1474581	1475822	.	-	.	ID=gene1556;Dbxref=GeneID:1014268;Name=SAG1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1459
NC_004116.1	RefSeq	CDS	1474581	1475822	.	-	0	ID=cds1419;Parent=gene1556;Dbxref=Genbank:NP_688454.1,GeneID:1014268;Name=NP_688454.1;Note=identified by match to PFAM protein family HMM PF01501;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688454.1;transl_table=11
NC_004116.1	RefSeq	gene	1475819	1477024	.	-	.	ID=gene1557;Dbxref=GeneID:1014269;Name=SAG1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1460
NC_004116.1	RefSeq	CDS	1475819	1477024	.	-	0	ID=cds1420;Parent=gene1557;Dbxref=Genbank:NP_688455.1,GeneID:1014269;Name=NP_688455.1;Note=identified by match to PFAM protein family HMM PF01501;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688455.1;transl_table=11
NC_004116.1	RefSeq	gene	1477033	1478040	.	-	.	ID=gene1558;Dbxref=GeneID:1014270;Name=SAG1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1461
NC_004116.1	RefSeq	CDS	1477033	1478040	.	-	0	ID=cds1421;Parent=gene1558;Dbxref=Genbank:NP_688456.1,GeneID:1014270;Name=NP_688456.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688456.1;transl_table=11
NC_004116.1	RefSeq	gene	1478371	1481283	.	-	.	ID=gene1559;Dbxref=GeneID:1014271;Name=SAG1462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1462
NC_004116.1	RefSeq	CDS	1478371	1481283	.	-	0	ID=cds1422;Parent=gene1559;Dbxref=Genbank:NP_688457.1,GeneID:1014271;Name=NP_688457.1;Note=identified by match to PFAM protein family HMM PF00746;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688457.1;transl_table=11
NC_004116.1	RefSeq	gene	1481666	1483162	.	+	.	ID=gene1560;Dbxref=GeneID:1014272;Name=SAG1463;Note=This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to GP:1289510%3B identified by sequence similarity%3B transcriptional regulator%2C RofA family%2C authentic point mutation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1463
NC_004116.1	RefSeq	gene	1483259	1485250	.	-	.	ID=gene1561;Dbxref=GeneID:1014273;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=SAG1464
NC_004116.1	RefSeq	CDS	1483259	1485250	.	-	0	ID=cds1423;Parent=gene1561;Dbxref=Genbank:NP_688458.1,GeneID:1014273;Name=NP_688458.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;gene=uvrB;product=excinuclease ABC subunit B;protein_id=NP_688458.1;transl_table=11
NC_004116.1	RefSeq	gene	1485311	1486231	.	-	.	ID=gene1562;Dbxref=GeneID:1014274;Name=SAG1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1465
NC_004116.1	RefSeq	CDS	1485311	1486231	.	-	0	ID=cds1424;Parent=gene1562;Dbxref=Genbank:NP_688459.1,GeneID:1014274;Name=NP_688459.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=protease;protein_id=NP_688459.1;transl_table=11
NC_004116.1	RefSeq	gene	1486414	1488597	.	+	.	ID=gene1563;Dbxref=GeneID:1014275;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=SAG1466
NC_004116.1	RefSeq	CDS	1486414	1488597	.	+	0	ID=cds1425;Parent=gene1563;Dbxref=Genbank:NP_688460.1,GeneID:1014275;Name=NP_688460.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;gene=glnP;product=glutamine ABC transporter glutamine-binding protein/permease;protein_id=NP_688460.1;transl_table=11
NC_004116.1	RefSeq	gene	1488597	1489337	.	+	.	ID=gene1564;Dbxref=GeneID:1014276;Name=SAG1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1467
NC_004116.1	RefSeq	CDS	1488597	1489337	.	+	0	ID=cds1426;Parent=gene1564;Dbxref=Genbank:NP_688461.1,GeneID:1014276;Name=NP_688461.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=glutamine ABC transporter ATP-binding protein%2C GlnQ;protein_id=NP_688461.1;transl_table=11
NC_004116.1	RefSeq	gene	1489486	1489836	.	+	.	ID=gene1565;Dbxref=GeneID:1014277;Name=SAG1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1468
NC_004116.1	RefSeq	CDS	1489486	1489836	.	+	0	ID=cds1427;Parent=gene1565;Dbxref=Genbank:NP_688462.1,GeneID:1014277;Name=NP_688462.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688462.1;transl_table=11
NC_004116.1	RefSeq	gene	1489928	1490086	.	-	.	ID=gene1566;Dbxref=GeneID:1014278;Name=SAG1469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1469
NC_004116.1	RefSeq	CDS	1489928	1490086	.	-	0	ID=cds1428;Parent=gene1566;Dbxref=Genbank:NP_688463.1,GeneID:1014278;Name=NP_688463.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688463.1;transl_table=11
NC_004116.1	RefSeq	gene	1490112	1491419	.	-	.	ID=gene1567;Dbxref=GeneID:1014279;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=SAG1470
NC_004116.1	RefSeq	CDS	1490112	1491419	.	-	0	ID=cds1429;Parent=gene1567;Dbxref=Genbank:NP_688464.2,GeneID:1014279;Name=NP_688464.2;Note=essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase ObgE;protein_id=NP_688464.2;transl_table=11
NC_004116.1	RefSeq	gene	1491486	1491614	.	-	.	ID=gene1568;Dbxref=GeneID:1014280;Name=SAG1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1471
NC_004116.1	RefSeq	CDS	1491486	1491614	.	-	0	ID=cds1430;Parent=gene1568;Dbxref=Genbank:NP_688465.1,GeneID:1014280;Name=NP_688465.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688465.1;transl_table=11
NC_004116.1	RefSeq	gene	1491811	1493052	.	+	.	ID=gene1569;Dbxref=GeneID:1014281;Name=pepS;gbkey=Gene;gene=pepS;gene_biotype=protein_coding;locus_tag=SAG1472
NC_004116.1	RefSeq	CDS	1491811	1493052	.	+	0	ID=cds1431;Parent=gene1569;Dbxref=Genbank:NP_688466.1,GeneID:1014281;Name=NP_688466.1;Note=identified by match to PFAM protein family HMM PF02073;gbkey=CDS;gene=pepS;product=aminopeptidase;protein_id=NP_688466.1;transl_table=11
NC_004116.1	RefSeq	gene	1493086	1493664	.	-	.	ID=gene1570;Dbxref=GeneID:1014282;Name=SAG1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1473
NC_004116.1	RefSeq	CDS	1493086	1493664	.	-	0	ID=cds1432;Parent=gene1570;Dbxref=Genbank:NP_688467.1,GeneID:1014282;Name=NP_688467.1;Note=identified by match to TIGR protein family HMM TIGR01167;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688467.1;transl_table=11
NC_004116.1	RefSeq	gene	1493774	1495816	.	-	.	ID=gene1571;Dbxref=GeneID:1014283;Name=SAG1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1474
NC_004116.1	RefSeq	CDS	1493774	1495816	.	-	0	ID=cds1433;Parent=gene1571;Dbxref=Genbank:NP_688468.1,GeneID:1014283;Name=NP_688468.1;Note=identified by match to PFAM protein family HMM PF01425;gbkey=CDS;product=amidase;protein_id=NP_688468.1;transl_table=11
NC_004116.1	RefSeq	gene	1495901	1496623	.	-	.	ID=gene1572;Dbxref=GeneID:1014284;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=SAG1475
NC_004116.1	RefSeq	CDS	1495901	1496623	.	-	0	ID=cds1434;Parent=gene1572;Dbxref=Genbank:NP_688469.1,GeneID:1014284;Name=NP_688469.1;Note=identified by match to PFAM protein family HMM PF00849;gbkey=CDS;gene=rsuA;product=ribosomal small subunit pseudouridine synthase A;protein_id=NP_688469.1;transl_table=11
NC_004116.1	RefSeq	gene	1496814	1497656	.	-	.	ID=gene1573;Dbxref=GeneID:1014285;Name=SAG1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1476
NC_004116.1	RefSeq	CDS	1496814	1497656	.	-	0	ID=cds1435;Parent=gene1573;Dbxref=Genbank:NP_688470.1,GeneID:1014285;Name=NP_688470.1;Note=identified by match to PFAM protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=NP_688470.1;transl_table=11
NC_004116.1	RefSeq	gene	1497923	1498597	.	+	.	ID=gene1574;Dbxref=GeneID:1014286;Name=SAG1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1477
NC_004116.1	RefSeq	CDS	1497923	1498597	.	+	0	ID=cds1436;Parent=gene1574;Dbxref=Genbank:NP_688471.1,GeneID:1014286;Name=NP_688471.1;Note=identified by match to PFAM protein family HMM PF00881;gbkey=CDS;product=nitroreductase family protein;protein_id=NP_688471.1;transl_table=11
NC_004116.1	RefSeq	gene	1498685	1499077	.	+	.	ID=gene1575;Dbxref=GeneID:1014287;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=SAG1478
NC_004116.1	RefSeq	CDS	1498685	1499077	.	+	0	ID=cds1437;Parent=gene1575;Dbxref=Genbank:NP_688472.1,GeneID:1014287;Name=NP_688472.1;Note=identified by match to PFAM protein family HMM PF00903;gbkey=CDS;gene=gloA;product=lactoylglutathione lyase;protein_id=NP_688472.1;transl_table=11
NC_004116.1	RefSeq	gene	1499206	1500132	.	+	.	ID=gene1576;Dbxref=GeneID:1014288;Name=SAG1479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1479
NC_004116.1	RefSeq	CDS	1499206	1500132	.	+	0	ID=cds1438;Parent=gene1576;Dbxref=Genbank:NP_688473.1,GeneID:1014288;Name=NP_688473.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688473.1;transl_table=11
NC_004116.1	RefSeq	gene	1500261	1501649	.	+	.	ID=gene1577;Dbxref=GeneID:1014289;Name=SAG1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1480
NC_004116.1	RefSeq	CDS	1500261	1501649	.	+	0	ID=cds1439;Parent=gene1577;Dbxref=Genbank:NP_688474.1,GeneID:1014289;Name=NP_688474.1;Note=identified by match to PFAM protein family HMM PF00324;gbkey=CDS;product=amino acid permease;protein_id=NP_688474.1;transl_table=11
NC_004116.1	RefSeq	gene	1501733	1502200	.	-	.	ID=gene1578;Dbxref=GeneID:1014290;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SAG1481
NC_004116.1	RefSeq	CDS	1501733	1502200	.	-	0	ID=cds1440;Parent=gene1578;Dbxref=Genbank:NP_688475.1,GeneID:1014290;Name=NP_688475.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=NP_688475.1;transl_table=11
NC_004116.1	RefSeq	gene	1502203	1504608	.	-	.	ID=gene1579;Dbxref=GeneID:1014291;Name=vacB;gbkey=Gene;gene=vacB;gene_biotype=protein_coding;locus_tag=SAG1482
NC_004116.1	RefSeq	CDS	1502203	1504608	.	-	0	ID=cds1441;Parent=gene1579;Dbxref=Genbank:NP_688476.1,GeneID:1014291;Name=NP_688476.1;Note=identified by match to PFAM protein family HMM PF00575;gbkey=CDS;gene=vacB;product=VacB/Rnb family exoribonuclease;protein_id=NP_688476.1;transl_table=11
NC_004116.1	RefSeq	gene	1504721	1504957	.	-	.	ID=gene1580;Dbxref=GeneID:1014292;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SAG1483
NC_004116.1	RefSeq	CDS	1504721	1504957	.	-	0	ID=cds1442;Parent=gene1580;Dbxref=Genbank:NP_688477.1,GeneID:1014292;Name=NP_688477.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=NP_688477.1;transl_table=11
NC_004116.1	RefSeq	gene	1505004	1505150	.	-	.	ID=gene1581;Dbxref=GeneID:1014293;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SAG1484
NC_004116.1	RefSeq	CDS	1505004	1505150	.	-	0	ID=cds1443;Parent=gene1581;Dbxref=Genbank:NP_688478.1,GeneID:1014293;Name=NP_688478.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=NP_688478.1;transl_table=11
NC_004116.1	RefSeq	gene	1505147	1506316	.	-	.	ID=gene1582;Dbxref=GeneID:1014294;Name=SAG1485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1485
NC_004116.1	RefSeq	CDS	1505147	1506316	.	-	0	ID=cds1444;Parent=gene1582;Dbxref=Genbank:NP_688479.1,GeneID:1014294;Name=NP_688479.1;Note=identified by match to PFAM protein family HMM PF00083;gbkey=CDS;product=multi-drug resistance protein;protein_id=NP_688479.1;transl_table=11
NC_004116.1	RefSeq	gene	1506512	1508158	.	-	.	ID=gene1583;Dbxref=GeneID:1014295;Name=SAG1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1486
NC_004116.1	RefSeq	CDS	1506512	1508158	.	-	0	ID=cds1445;Parent=gene1583;Dbxref=Genbank:NP_688480.1,GeneID:1014295;Name=NP_688480.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688480.1;transl_table=11
NC_004116.1	RefSeq	gene	1508148	1508849	.	-	.	ID=gene1584;Dbxref=GeneID:1014296;Name=SAG1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1487
NC_004116.1	RefSeq	CDS	1508148	1508849	.	-	0	ID=cds1446;Parent=gene1584;Dbxref=Genbank:NP_688481.1,GeneID:1014296;Name=NP_688481.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688481.1;transl_table=11
NC_004116.1	RefSeq	gene	1508973	1509560	.	-	.	ID=gene1585;Dbxref=GeneID:1014297;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SAG1488
NC_004116.1	RefSeq	CDS	1508973	1509560	.	-	0	ID=cds1447;Parent=gene1585;Dbxref=Genbank:NP_688482.1,GeneID:1014297;Name=NP_688482.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=NP_688482.1;transl_table=11
NC_004116.1	RefSeq	gene	1509557	1510378	.	-	.	ID=gene1586;Dbxref=GeneID:1014298;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=SAG1489
NC_004116.1	RefSeq	CDS	1509557	1510378	.	-	0	ID=cds1448;Parent=gene1586;Dbxref=Genbank:NP_688483.1,GeneID:1014298;Name=NP_688483.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;gene=mutM;product=formamidopyrimidine-DNA glycosylase;protein_id=NP_688483.1;transl_table=11
NC_004116.1	RefSeq	gene	1510527	1511375	.	-	.	ID=gene1587;Dbxref=GeneID:1014299;Name=SAG1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1490
NC_004116.1	RefSeq	CDS	1510527	1511375	.	-	0	ID=cds1449;Parent=gene1587;Dbxref=Genbank:NP_688484.1,GeneID:1014299;Name=NP_688484.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=MutR family transcriptional regulator;protein_id=NP_688484.1;transl_table=11
NC_004116.1	RefSeq	gene	1511592	1513184	.	+	.	ID=gene1588;Dbxref=GeneID:1014300;Name=SAG1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1491
NC_004116.1	RefSeq	CDS	1511592	1513184	.	+	0	ID=cds1450;Parent=gene1588;Dbxref=Genbank:NP_688485.1,GeneID:1014300;Name=NP_688485.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688485.1;transl_table=11
NC_004116.1	RefSeq	gene	1513220	1513396	.	+	.	ID=gene1589;Dbxref=GeneID:1014301;Name=SAG1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1492
NC_004116.1	RefSeq	CDS	1513220	1513396	.	+	0	ID=cds1451;Parent=gene1589;Dbxref=Genbank:NP_688486.1,GeneID:1014301;Name=NP_688486.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688486.1;transl_table=11
NC_004116.1	RefSeq	gene	1513447	1513647	.	-	.	ID=gene1590;Dbxref=GeneID:1014302;Name=SAG1493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1493
NC_004116.1	RefSeq	CDS	1513447	1513647	.	-	0	ID=cds1452;Parent=gene1590;Dbxref=Genbank:NP_688487.1,GeneID:1014302;Name=NP_688487.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688487.1;transl_table=11
NC_004116.1	RefSeq	gene	1513840	1513938	.	-	.	ID=gene1591;Dbxref=GeneID:1014303;Name=SAG1494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1494
NC_004116.1	RefSeq	CDS	1513840	1513938	.	-	0	ID=cds1453;Parent=gene1591;Dbxref=Genbank:NP_688488.1,GeneID:1014303;Name=NP_688488.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688488.1;transl_table=11
NC_004116.1	RefSeq	gene	1514173	1514418	.	-	.	ID=gene1592;Dbxref=GeneID:1014304;Name=SAG1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1495
NC_004116.1	RefSeq	CDS	1514173	1514418	.	-	0	ID=cds1454;Parent=gene1592;Dbxref=Genbank:NP_688489.1,GeneID:1014304;Name=NP_688489.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=CAAX amino terminal protease family protein;protein_id=NP_688489.1;transl_table=11
NC_004116.1	RefSeq	gene	1514446	1514778	.	-	.	ID=gene1593;Dbxref=GeneID:1014305;Name=SAG1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1496
NC_004116.1	RefSeq	CDS	1514446	1514778	.	-	0	ID=cds1455;Parent=gene1593;Dbxref=Genbank:NP_688490.1,GeneID:1014305;Name=NP_688490.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688490.1;transl_table=11
NC_004116.1	RefSeq	gene	1514880	1514993	.	-	.	ID=gene1594;Dbxref=GeneID:1014306;Name=SAG1497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1497
NC_004116.1	RefSeq	CDS	1514880	1514993	.	-	0	ID=cds1456;Parent=gene1594;Dbxref=Genbank:NP_688491.1,GeneID:1014306;Name=NP_688491.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688491.1;transl_table=11
NC_004116.1	RefSeq	gene	1515157	1515558	.	-	.	ID=gene1595;Dbxref=GeneID:1014307;Name=SAG1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1498
NC_004116.1	RefSeq	CDS	1515157	1515558	.	-	0	ID=cds1457;Parent=gene1595;Dbxref=Genbank:NP_688492.1,GeneID:1014307;Name=NP_688492.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688492.1;transl_table=11
NC_004116.1	RefSeq	gene	1515795	1516694	.	-	.	ID=gene1596;Dbxref=GeneID:1014308;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;gene_synonym=bex,rbaA,sdgE,yqfH;locus_tag=SAG1499
NC_004116.1	RefSeq	CDS	1515795	1516694	.	-	0	ID=cds1458;Parent=gene1596;Dbxref=Genbank:NP_688493.1,GeneID:1014308;Name=NP_688493.1;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=NP_688493.1;transl_table=11
NC_004116.1	RefSeq	gene	1516736	1517134	.	-	.	ID=gene1597;Dbxref=GeneID:1014309;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=SAG1500
NC_004116.1	RefSeq	CDS	1516736	1517134	.	-	0	ID=cds1459;Parent=gene1597;Dbxref=Genbank:NP_688494.1,GeneID:1014309;Name=NP_688494.1;Note=identified by match to PFAM protein family HMM PF01219;gbkey=CDS;gene=dgkA;product=diacylglycerol kinase;protein_id=NP_688494.1;transl_table=11
NC_004116.1	RefSeq	gene	1517115	1517600	.	-	.	ID=gene1598;Dbxref=GeneID:1014310;Name=SAG1501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1501
NC_004116.1	RefSeq	CDS	1517115	1517600	.	-	0	ID=cds1460;Parent=gene1598;Dbxref=Genbank:NP_688495.1,GeneID:1014310;Name=NP_688495.1;gbkey=CDS;product=metalloprotease;protein_id=NP_688495.1;transl_table=11
NC_004116.1	RefSeq	gene	1518007	1518813	.	-	.	ID=gene1599;Dbxref=GeneID:1014311;Name=SAG1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1502
NC_004116.1	RefSeq	CDS	1518007	1518813	.	-	0	ID=cds1461;Parent=gene1599;Dbxref=Genbank:NP_688496.1,GeneID:1014311;Name=NP_688496.1;Note=similar to SP:P39887%3B identified by sequence similarity;gbkey=CDS;product=tetracenomycin polyketide synthesis O-methyltransferase TcmP;protein_id=NP_688496.1;transl_table=11
NC_004116.1	RefSeq	gene	1518858	1518977	.	-	.	ID=gene1600;Dbxref=GeneID:1014312;Name=SAG1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1503
NC_004116.1	RefSeq	CDS	1518858	1518977	.	-	0	ID=cds1462;Parent=gene1600;Dbxref=Genbank:NP_688497.1,GeneID:1014312;Name=NP_688497.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688497.1;transl_table=11
NC_004116.1	RefSeq	gene	1519014	1519130	.	-	.	ID=gene1601;Dbxref=GeneID:1014313;Name=SAG1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1504
NC_004116.1	RefSeq	CDS	1519014	1519130	.	-	0	ID=cds1463;Parent=gene1601;Dbxref=Genbank:NP_688498.1,GeneID:1014313;Name=NP_688498.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688498.1;transl_table=11
NC_004116.1	RefSeq	gene	1519135	1519611	.	-	.	ID=gene1602;Dbxref=GeneID:1014314;Name=SAG1505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1505
NC_004116.1	RefSeq	CDS	1519135	1519611	.	-	0	ID=cds1464;Parent=gene1602;Dbxref=Genbank:NP_688499.1,GeneID:1014314;Name=NP_688499.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=NP_688499.1;transl_table=11
NC_004116.1	RefSeq	gene	1519803	1520606	.	+	.	ID=gene1603;Dbxref=GeneID:1014315;Name=SAG1506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1506
NC_004116.1	RefSeq	CDS	1519803	1520606	.	+	0	ID=cds1465;Parent=gene1603;Dbxref=Genbank:NP_688500.1,GeneID:1014315;Name=NP_688500.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688500.1;transl_table=11
NC_004116.1	RefSeq	gene	1520697	1521734	.	-	.	ID=gene1604;Dbxref=GeneID:1014316;Name=SAG1507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1507
NC_004116.1	RefSeq	CDS	1520697	1521734	.	-	0	ID=cds1466;Parent=gene1604;Dbxref=Genbank:NP_688501.1,GeneID:1014316;Name=NP_688501.1;Note=identified by match to PFAM protein family HMM PF02562;gbkey=CDS;product=PhoH family protein;protein_id=NP_688501.1;transl_table=11
NC_004116.1	RefSeq	gene	1521807	1523579	.	-	.	ID=gene1605;Dbxref=GeneID:1014317;Name=SAG1508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1508
NC_004116.1	RefSeq	CDS	1521807	1523579	.	-	0	ID=cds1467;Parent=gene1605;Dbxref=Genbank:NP_688502.1,GeneID:1014317;Name=NP_688502.1;Note=in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever;gbkey=CDS;product=hypothetical protein;protein_id=NP_688502.1;transl_table=11
NC_004116.1	RefSeq	gene	1523736	1523951	.	-	.	ID=gene1606;Dbxref=GeneID:1014318;Name=SAG1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1509
NC_004116.1	RefSeq	CDS	1523736	1523951	.	-	0	ID=cds1468;Parent=gene1606;Dbxref=Genbank:NP_688503.1,GeneID:1014318;Name=NP_688503.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688503.1;transl_table=11
NC_004116.1	RefSeq	gene	1523948	1524457	.	-	.	ID=gene1607;Dbxref=GeneID:1014319;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=SAG1510
NC_004116.1	RefSeq	CDS	1523948	1524457	.	-	0	ID=cds1469;Parent=gene1607;Dbxref=Genbank:NP_688504.1,GeneID:1014319;Name=NP_688504.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;gene=msrA;product=methionine sulfoxide reductase A;protein_id=NP_688504.1;transl_table=11
NC_004116.1	RefSeq	gene	1524595	1525449	.	-	.	ID=gene1608;Dbxref=GeneID:1014320;Name=SAG1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1511
NC_004116.1	RefSeq	CDS	1524595	1525449	.	-	0	ID=cds1470;Parent=gene1608;Dbxref=Genbank:NP_688505.1,GeneID:1014320;Name=NP_688505.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688505.1;transl_table=11
NC_004116.1	RefSeq	gene	1525567	1526124	.	-	.	ID=gene1609;Dbxref=GeneID:1014321;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SAG1512
NC_004116.1	RefSeq	CDS	1525567	1526124	.	-	0	ID=cds1471;Parent=gene1609;Dbxref=Genbank:NP_688506.1,GeneID:1014321;Name=NP_688506.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=NP_688506.1;transl_table=11
NC_004116.1	RefSeq	gene	1526140	1526868	.	-	.	ID=gene1610;Dbxref=GeneID:1014322;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SAG1513
NC_004116.1	RefSeq	CDS	1526140	1526868	.	-	0	ID=cds1472;Parent=gene1610;Dbxref=Genbank:NP_688507.1,GeneID:1014322;Name=NP_688507.1;Note=Catalyzes the phosphorylation of UMP to UDP;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=NP_688507.1;transl_table=11
NC_004116.1	RefSeq	gene	1526989	1527669	.	-	.	ID=gene1611;Dbxref=GeneID:1014323;Name=SAG1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1514
NC_004116.1	RefSeq	CDS	1526989	1527669	.	-	0	ID=cds1473;Parent=gene1611;Dbxref=Genbank:NP_688508.1,GeneID:1014323;Name=NP_688508.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=NP_688508.1;transl_table=11
NC_004116.1	RefSeq	gene	1527656	1528444	.	-	.	ID=gene1612;Dbxref=GeneID:1014324;Name=SAG1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1515
NC_004116.1	RefSeq	CDS	1527656	1528444	.	-	0	ID=cds1474;Parent=gene1612;Dbxref=Genbank:NP_688509.1,GeneID:1014324;Name=NP_688509.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=NP_688509.1;transl_table=11
NC_004116.1	RefSeq	gene	1528432	1529199	.	-	.	ID=gene1613;Dbxref=GeneID:1014325;Name=SAG1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1516
NC_004116.1	RefSeq	CDS	1528432	1529199	.	-	0	ID=cds1475;Parent=gene1613;Dbxref=Genbank:NP_688510.1,GeneID:1014325;Name=NP_688510.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=peptide ABC transporter permease;protein_id=NP_688510.1;transl_table=11
NC_004116.1	RefSeq	gene	1529238	1530182	.	-	.	ID=gene1614;Dbxref=GeneID:1014326;Name=SAG1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1517
NC_004116.1	RefSeq	CDS	1529238	1530182	.	-	0	ID=cds1476;Parent=gene1614;Dbxref=Genbank:NP_688511.1,GeneID:1014326;Name=NP_688511.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=peptide ABC transporter permease;protein_id=NP_688511.1;transl_table=11
NC_004116.1	RefSeq	gene	1530169	1531785	.	-	.	ID=gene1615;Dbxref=GeneID:1014327;Name=SAG1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1518
NC_004116.1	RefSeq	CDS	1530169	1531785	.	-	0	ID=cds1477;Parent=gene1615;Dbxref=Genbank:NP_688512.1,GeneID:1014327;Name=NP_688512.1;Note=identified by match to PFAM protein family HMM PF00496;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=NP_688512.1;transl_table=11
NC_004116.1	RefSeq	gene	1532174	1532863	.	-	.	ID=gene1616;Dbxref=GeneID:1014328;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=SAG1519
NC_004116.1	RefSeq	CDS	1532174	1532863	.	-	0	ID=cds1478;Parent=gene1616;Dbxref=Genbank:NP_688513.1,GeneID:1014328;Name=NP_688513.1;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=NP_688513.1;transl_table=11
NC_004116.1	RefSeq	gene	1532967	1533392	.	-	.	ID=gene1617;Dbxref=GeneID:1014329;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=SAG1520
NC_004116.1	RefSeq	CDS	1532967	1533392	.	-	0	ID=cds1479;Parent=gene1617;Dbxref=Genbank:NP_688514.1,GeneID:1014329;Name=NP_688514.1;Note=binds directly to 23S ribosomal RNA;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=NP_688514.1;transl_table=11
NC_004116.1	RefSeq	gene	1533654	1534820	.	+	.	ID=gene1618;Dbxref=GeneID:1014330;Name=SAG1521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1521
NC_004116.1	RefSeq	CDS	1533654	1534820	.	+	0	ID=cds1480;Parent=gene1618;Dbxref=Genbank:NP_688515.1,GeneID:1014330;Name=NP_688515.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=IS30 family transposase;protein_id=NP_688515.1;transl_table=11
NC_004116.1	RefSeq	gene	1535154	1536536	.	-	.	ID=gene1619;Dbxref=GeneID:1014331;Name=SAG1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1522
NC_004116.1	RefSeq	CDS	1535154	1536536	.	-	0	ID=cds1481;Parent=gene1619;Dbxref=Genbank:NP_688516.1,GeneID:1014331;Name=NP_688516.1;gbkey=CDS;product=major facilitator transporter;protein_id=NP_688516.1;transl_table=11
NC_004116.1	RefSeq	gene	1536544	1537758	.	-	.	ID=gene1620;Dbxref=GeneID:1014332;Name=SAG1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1523
NC_004116.1	RefSeq	CDS	1536544	1537758	.	-	0	ID=cds1482;Parent=gene1620;Dbxref=Genbank:NP_688517.1,GeneID:1014332;Name=NP_688517.1;Note=identified by match to PFAM protein family HMM PF01546;gbkey=CDS;product=M20/M25/M40 family peptidase;protein_id=NP_688517.1;transl_table=11
NC_004116.1	RefSeq	gene	1538037	1538921	.	+	.	ID=gene1621;Dbxref=GeneID:1014333;Name=SAG1524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1524
NC_004116.1	RefSeq	CDS	1538037	1538921	.	+	0	ID=cds1483;Parent=gene1621;Dbxref=Genbank:NP_688518.1,GeneID:1014333;Name=NP_688518.1;Note=identified by match to PFAM protein family HMM PF00126;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=NP_688518.1;transl_table=11
NC_004116.1	RefSeq	gene	1538982	1539335	.	+	.	ID=gene1622;Dbxref=GeneID:1014334;Name=SAG1525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1525
NC_004116.1	RefSeq	CDS	1538982	1539335	.	+	0	ID=cds1484;Parent=gene1622;Dbxref=Genbank:NP_688519.1,GeneID:1014334;Name=NP_688519.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688519.1;transl_table=11
NC_004116.1	RefSeq	gene	1539406	1539942	.	+	.	ID=gene1623;Dbxref=GeneID:1014335;Name=SAG1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1526
NC_004116.1	RefSeq	CDS	1539406	1539942	.	+	0	ID=cds1485;Parent=gene1623;Dbxref=Genbank:NP_688520.1,GeneID:1014335;Name=NP_688520.1;gbkey=CDS;product=IS861%2C transposase OrfA;protein_id=NP_688520.1;transl_table=11
NC_004116.1	RefSeq	gene	1539918	1540751	.	+	.	ID=gene1624;Dbxref=GeneID:1014336;Name=SAG1527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1527
NC_004116.1	RefSeq	CDS	1539918	1540751	.	+	0	ID=cds1486;Parent=gene1624;Dbxref=Genbank:NP_688521.1,GeneID:1014336;Name=NP_688521.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=IS861%2C transposase OrfB;protein_id=NP_688521.1;transl_table=11
NC_004116.1	RefSeq	gene	1540800	1542515	.	-	.	ID=gene1625;Dbxref=GeneID:1014337;Name=SAG1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1528
NC_004116.1	RefSeq	CDS	1540800	1542515	.	-	0	ID=cds1487;Parent=gene1625;Dbxref=Genbank:NP_688522.1,GeneID:1014337;Name=NP_688522.1;Note=identified by match to PFAM protein family HMM PF00425;gbkey=CDS;product=chorismate binding protein;protein_id=NP_688522.1;transl_table=11
NC_004116.1	RefSeq	gene	1542597	1545047	.	-	.	ID=gene1626;Dbxref=GeneID:1014338;Name=SAG1529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1529
NC_004116.1	RefSeq	CDS	1542597	1545047	.	-	0	ID=cds1488;Parent=gene1626;Dbxref=Genbank:NP_688523.1,GeneID:1014338;Name=NP_688523.1;Note=identified by match to PFAM protein family HMM PF01580;gbkey=CDS;product=DNA translocase FtsK;protein_id=NP_688523.1;transl_table=11
NC_004116.1	RefSeq	gene	1545213	1546016	.	+	.	ID=gene1627;Dbxref=GeneID:1014339;Name=SAG1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1530
NC_004116.1	RefSeq	CDS	1545213	1546016	.	+	0	ID=cds1489;Parent=gene1627;Dbxref=Genbank:NP_688524.1,GeneID:1014339;Name=NP_688524.1;Note=identified by match to PFAM protein family HMM PF00160;gbkey=CDS;product=cyclophilin type peptidyl-prolyl cis-trans isomerase;protein_id=NP_688524.1;transl_table=11
NC_004116.1	RefSeq	gene	1546068	1546901	.	-	.	ID=gene1628;Dbxref=GeneID:1014340;Name=SAG1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1531
NC_004116.1	RefSeq	CDS	1546068	1546901	.	-	0	ID=cds1490;Parent=gene1628;Dbxref=Genbank:NP_688525.1,GeneID:1014340;Name=NP_688525.1;Note=identified by match to PFAM protein family HMM PF00950;gbkey=CDS;product=manganese ABC transporter permease;protein_id=NP_688525.1;transl_table=11
NC_004116.1	RefSeq	gene	1546903	1547619	.	-	.	ID=gene1629;Dbxref=GeneID:1014341;Name=SAG1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1532
NC_004116.1	RefSeq	CDS	1546903	1547619	.	-	0	ID=cds1491;Parent=gene1629;Dbxref=Genbank:NP_688526.1,GeneID:1014341;Name=NP_688526.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=manganese ABC transporter ATP-binding protein;protein_id=NP_688526.1;transl_table=11
NC_004116.1	RefSeq	gene	1547790	1548716	.	-	.	ID=gene1630;Dbxref=GeneID:1014342;Name=SAG1533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1533
NC_004116.1	RefSeq	CDS	1547790	1548716	.	-	0	ID=cds1492;Parent=gene1630;Dbxref=Genbank:NP_688527.1,GeneID:1014342;Name=NP_688527.1;Note=identified by match to PFAM protein family HMM PF01297;gbkey=CDS;product=manganese ABC transporter manganese-binding adhesion liprotein;protein_id=NP_688527.1;transl_table=11
NC_004116.1	RefSeq	gene	1548883	1549530	.	+	.	ID=gene1631;Dbxref=GeneID:1014343;Name=SAG1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1534
NC_004116.1	RefSeq	CDS	1548883	1549530	.	+	0	ID=cds1493;Parent=gene1631;Dbxref=Genbank:NP_688528.1,GeneID:1014343;Name=NP_688528.1;Note=identified by match to PFAM protein family HMM PF01325;gbkey=CDS;product=iron-dependent transcriptional regulator;protein_id=NP_688528.1;transl_table=11
NC_004116.1	RefSeq	gene	1549570	1550259	.	-	.	ID=gene1632;Dbxref=GeneID:1014344;Name=pfs;gbkey=Gene;gene=pfs;gene_biotype=protein_coding;locus_tag=SAG1535
NC_004116.1	RefSeq	CDS	1549570	1550259	.	-	0	ID=cds1494;Parent=gene1632;Dbxref=Genbank:NP_688529.1,GeneID:1014344;Name=NP_688529.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;gene=pfs;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=NP_688529.1;transl_table=11
NC_004116.1	RefSeq	gene	1550269	1550538	.	-	.	ID=gene1633;Dbxref=GeneID:1014345;Name=SAG1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1536
NC_004116.1	RefSeq	CDS	1550269	1550538	.	-	0	ID=cds1495;Parent=gene1633;Dbxref=Genbank:NP_688530.1,GeneID:1014345;Name=NP_688530.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688530.1;transl_table=11
NC_004116.1	RefSeq	gene	1550538	1551092	.	-	.	ID=gene1634;Dbxref=GeneID:1014346;Name=SAG1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1537
NC_004116.1	RefSeq	CDS	1550538	1551092	.	-	0	ID=cds1496;Parent=gene1634;Dbxref=Genbank:NP_688531.1,GeneID:1014346;Name=NP_688531.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=NP_688531.1;transl_table=11
NC_004116.1	RefSeq	gene	1551113	1552492	.	-	.	ID=gene1635;Dbxref=GeneID:1014347;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SAG1538
NC_004116.1	RefSeq	CDS	1551113	1552492	.	-	0	ID=cds1497;Parent=gene1635;Dbxref=Genbank:NP_688532.1,GeneID:1014347;Name=NP_688532.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=NP_688532.1;transl_table=11
NC_004116.1	RefSeq	gene	1552634	1552729	.	+	.	ID=gene1636;Dbxref=GeneID:1014348;Name=SAG1539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1539
NC_004116.1	RefSeq	CDS	1552634	1552729	.	+	0	ID=cds1498;Parent=gene1636;Dbxref=Genbank:NP_688533.1,GeneID:1014348;Name=NP_688533.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688533.1;transl_table=11
NC_004116.1	RefSeq	gene	1552736	1553149	.	-	.	ID=gene1637;Dbxref=GeneID:1014349;Name=SAG1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1540
NC_004116.1	RefSeq	CDS	1552736	1553149	.	-	0	ID=cds1499;Parent=gene1637;Dbxref=Genbank:NP_688534.1,GeneID:1014349;Name=NP_688534.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688534.1;transl_table=11
NC_004116.1	RefSeq	gene	1553162	1553539	.	-	.	ID=gene1638;Dbxref=GeneID:1014350;Name=SAG1541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1541
NC_004116.1	RefSeq	CDS	1553162	1553539	.	-	0	ID=cds1500;Parent=gene1638;Dbxref=Genbank:NP_688535.1,GeneID:1014350;Name=NP_688535.1;gbkey=CDS;product=glyoxylase;protein_id=NP_688535.1;transl_table=11
NC_004116.1	RefSeq	gene	1553628	1554584	.	-	.	ID=gene1639;Dbxref=GeneID:1014351;Name=SAG1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1542
NC_004116.1	RefSeq	CDS	1553628	1554584	.	-	0	ID=cds1501;Parent=gene1639;Dbxref=Genbank:NP_688536.1,GeneID:1014351;Name=NP_688536.1;Note=identified by match to PFAM protein family HMM PF01408;gbkey=CDS;product=Gfo/Idh/MocA family oxidoreductase;protein_id=NP_688536.1;transl_table=11
NC_004116.1	RefSeq	gene	1554581	1555032	.	-	.	ID=gene1640;Dbxref=GeneID:1014352;Name=SAG1543;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=other;locus_tag=SAG1543
NC_004116.1	RefSeq	gene	1555271	1555969	.	-	.	ID=gene1641;Dbxref=GeneID:1014353;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SAG1544
NC_004116.1	RefSeq	CDS	1555271	1555969	.	-	0	ID=cds1502;Parent=gene1641;Dbxref=Genbank:NP_688537.1,GeneID:1014353;Name=NP_688537.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=NP_688537.1;transl_table=11
NC_004116.1	RefSeq	gene	1555962	1556198	.	-	.	ID=gene1642;Dbxref=GeneID:1014354;Name=SAG1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1545
NC_004116.1	RefSeq	CDS	1555962	1556198	.	-	0	ID=cds1503;Parent=gene1642;Dbxref=Genbank:NP_688538.1,GeneID:1014354;Name=NP_688538.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688538.1;transl_table=11
NC_004116.1	RefSeq	gene	1556288	1556536	.	-	.	ID=gene1643;Dbxref=GeneID:1014355;Name=SAG1546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1546
NC_004116.1	RefSeq	CDS	1556288	1556536	.	-	0	ID=cds1504;Parent=gene1643;Dbxref=Genbank:NP_688539.1,GeneID:1014355;Name=NP_688539.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688539.1;transl_table=11
NC_004116.1	RefSeq	gene	1556734	1557234	.	-	.	ID=gene1644;Dbxref=GeneID:1014356;Name=SAG1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1547
NC_004116.1	RefSeq	CDS	1556734	1557234	.	-	0	ID=cds1505;Parent=gene1644;Dbxref=Genbank:NP_688540.1,GeneID:1014356;Name=NP_688540.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688540.1;transl_table=11
NC_004116.1	RefSeq	gene	1557474	1558742	.	-	.	ID=gene1645;Dbxref=GeneID:1014357;Name=SAG1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1548
NC_004116.1	RefSeq	CDS	1557474	1558742	.	-	0	ID=cds1506;Parent=gene1645;Dbxref=Genbank:NP_688541.1,GeneID:1014357;Name=NP_688541.1;Note=identified by match to PFAM protein family HMM PF00535;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_688541.1;transl_table=11
NC_004116.1	RefSeq	gene	1558750	1559133	.	+	.	ID=gene1646;Dbxref=GeneID:1014358;Name=SAG1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1549
NC_004116.1	RefSeq	CDS	1558750	1559133	.	+	0	ID=cds1507;Parent=gene1646;Dbxref=Genbank:NP_688542.1,GeneID:1014358;Name=NP_688542.1;Note=similar to OMNI:SP0537%3B identified by sequence similarity;gbkey=CDS;product=IS1381 transposase protein A;protein_id=NP_688542.1;transl_table=11
NC_004116.1	RefSeq	gene	1559166	1559555	.	+	.	ID=gene1647;Dbxref=GeneID:1014359;Name=SAG1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1550
NC_004116.1	RefSeq	CDS	1559166	1559555	.	+	0	ID=cds1508;Parent=gene1647;Dbxref=Genbank:NP_688543.1,GeneID:1014359;Name=NP_688543.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1381 transposase protein B;protein_id=NP_688543.1;transl_table=11
NC_004116.1	RefSeq	gene	1559544	1559747	.	-	.	ID=gene1648;Dbxref=GeneID:1014360;Name=SAG1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1551
NC_004116.1	RefSeq	CDS	1559544	1559747	.	-	0	ID=cds1509;Parent=gene1648;Dbxref=Genbank:NP_688544.1,GeneID:1014360;Name=NP_688544.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688544.1;transl_table=11
NC_004116.1	RefSeq	gene	1559887	1562046	.	-	.	ID=gene1649;Dbxref=GeneID:1014361;Name=SAG1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1552
NC_004116.1	RefSeq	CDS	1559887	1562046	.	-	0	ID=cds1510;Parent=gene1649;Dbxref=Genbank:NP_688545.1,GeneID:1014361;Name=NP_688545.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688545.1;transl_table=11
NC_004116.1	RefSeq	gene	1562053	1563486	.	-	.	ID=gene1650;Dbxref=GeneID:1014362;Name=SAG1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1553
NC_004116.1	RefSeq	CDS	1562053	1563486	.	-	0	ID=cds1511;Parent=gene1650;Dbxref=Genbank:NP_688546.1,GeneID:1014362;Name=NP_688546.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688546.1;transl_table=11
NC_004116.1	RefSeq	gene	1563491	1564168	.	-	.	ID=gene1651;Dbxref=GeneID:1014363;Name=SAG1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1554
NC_004116.1	RefSeq	CDS	1563491	1564168	.	-	0	ID=cds1512;Parent=gene1651;Dbxref=Genbank:NP_688547.1,GeneID:1014363;Name=NP_688547.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688547.1;transl_table=11
NC_004116.1	RefSeq	gene	1564220	1564915	.	-	.	ID=gene1652;Dbxref=GeneID:1014364;Name=SAG1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1555
NC_004116.1	RefSeq	CDS	1564220	1564915	.	-	0	ID=cds1513;Parent=gene1652;Dbxref=Genbank:NP_688548.1,GeneID:1014364;Name=NP_688548.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688548.1;transl_table=11
NC_004116.1	RefSeq	gene	1565281	1566618	.	-	.	ID=gene1653;Dbxref=GeneID:1014365;Name=brnQ-1;gbkey=Gene;gene=brnQ-1;gene_biotype=protein_coding;locus_tag=SAG1556
NC_004116.1	RefSeq	CDS	1565281	1566618	.	-	0	ID=cds1514;Parent=gene1653;Dbxref=Genbank:NP_688549.1,GeneID:1014365;Name=NP_688549.1;Note=identified by match to TIGR protein family HMM TIGR00796;gbkey=CDS;gene=brnQ-1;product=branched-chain amino acid transport system II carrier protein;protein_id=NP_688549.1;transl_table=11
NC_004116.1	RefSeq	gene	1566814	1568811	.	-	.	ID=gene1654;Dbxref=GeneID:1014366;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=SAG1557
NC_004116.1	RefSeq	CDS	1566814	1568811	.	-	0	ID=cds1515;Parent=gene1654;Dbxref=Genbank:NP_688550.1,GeneID:1014366;Name=NP_688550.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionyl-tRNA synthetase;protein_id=NP_688550.1;transl_table=11
NC_004116.1	RefSeq	gene	1568954	1569829	.	+	.	ID=gene1655;Dbxref=GeneID:1014367;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=SAG1558
NC_004116.1	RefSeq	CDS	1568954	1569829	.	+	0	ID=cds1516;Parent=gene1655;Dbxref=Genbank:NP_688551.1,GeneID:1014367;Name=NP_688551.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;gene=tehB;product=tellurite resistance protein TehB;protein_id=NP_688551.1;transl_table=11
NC_004116.1	RefSeq	gene	1569987	1570682	.	-	.	ID=gene1656;Dbxref=GeneID:1014368;Name=SAG1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1559
NC_004116.1	RefSeq	CDS	1569987	1570682	.	-	0	ID=cds1517;Parent=gene1656;Dbxref=Genbank:NP_688552.1,GeneID:1014368;Name=NP_688552.1;Note=similar to OMNI:NTL01SPL0310%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688552.1;transl_table=11
NC_004116.1	RefSeq	gene	1570697	1570819	.	-	.	ID=gene1657;Dbxref=GeneID:1014369;Name=SAG1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1560
NC_004116.1	RefSeq	CDS	1570697	1570819	.	-	0	ID=cds1518;Parent=gene1657;Dbxref=Genbank:NP_688553.1,GeneID:1014369;Name=NP_688553.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688553.1;transl_table=11
NC_004116.1	RefSeq	gene	1571018	1572235	.	+	.	ID=gene1658;Dbxref=GeneID:1014370;Name=SAG1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1561
NC_004116.1	RefSeq	CDS	1571018	1572235	.	+	0	ID=cds1519;Parent=gene1658;Dbxref=Genbank:NP_688554.1,GeneID:1014370;Name=NP_688554.1;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=NP_688554.1;transl_table=11
NC_004116.1	RefSeq	gene	1572219	1573061	.	+	.	ID=gene1659;Dbxref=GeneID:1014371;Name=SAG1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1562
NC_004116.1	RefSeq	CDS	1572219	1573061	.	+	0	ID=cds1520;Parent=gene1659;Dbxref=Genbank:NP_688555.1,GeneID:1014371;Name=NP_688555.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688555.1;transl_table=11
NC_004116.1	RefSeq	gene	1573138	1573965	.	+	.	ID=gene1660;Dbxref=GeneID:1014372;Name=exoA;gbkey=Gene;gene=exoA;gene_biotype=protein_coding;locus_tag=SAG1563
NC_004116.1	RefSeq	CDS	1573138	1573965	.	+	0	ID=cds1521;Parent=gene1660;Dbxref=Genbank:NP_688556.1,GeneID:1014372;Name=NP_688556.1;Note=identified by match to PFAM protein family HMM PF01260%3B In Gram negative bacteria%2C the apparent functional equivalent is known as exodeoxyribonuclease III (xth).;gbkey=CDS;gene=exoA;product=exodeoxyribonuclease;protein_id=NP_688556.1;transl_table=11
NC_004116.1	RefSeq	gene	1574005	1574361	.	-	.	ID=gene1661;Dbxref=GeneID:1014373;Name=SAG1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1564
NC_004116.1	RefSeq	CDS	1574005	1574361	.	-	0	ID=cds1522;Parent=gene1661;Dbxref=Genbank:NP_688557.1,GeneID:1014373;Name=NP_688557.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688557.1;transl_table=11
NC_004116.1	RefSeq	gene	1574363	1574839	.	-	.	ID=gene1662;Dbxref=GeneID:1014374;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=SAG1565
NC_004116.1	RefSeq	CDS	1574363	1574839	.	-	0	ID=cds1523;Parent=gene1662;Dbxref=Genbank:NP_688558.1,GeneID:1014374;Name=NP_688558.1;Note=identified by match to PFAM protein family HMM PF01035;gbkey=CDS;gene=ogt;product=methylated-DNA--protein-cysteine S-methyltransferase;protein_id=NP_688558.1;transl_table=11
NC_004116.1	RefSeq	gene	1574894	1576075	.	-	.	ID=gene1663;Dbxref=GeneID:1014375;Name=SAG1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1566
NC_004116.1	RefSeq	CDS	1574894	1576075	.	-	0	ID=cds1524;Parent=gene1663;Dbxref=Genbank:NP_688559.1,GeneID:1014375;Name=NP_688559.1;Note=identified by match to PFAM protein family HMM PF01842;gbkey=CDS;product=D-isomer specific 2-hydroxyacid dehydrogenase family protein;protein_id=NP_688559.1;transl_table=11
NC_004116.1	RefSeq	gene	1576138	1576686	.	-	.	ID=gene1664;Dbxref=GeneID:1014376;Name=SAG1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1567
NC_004116.1	RefSeq	CDS	1576138	1576686	.	-	0	ID=cds1525;Parent=gene1664;Dbxref=Genbank:NP_688560.1,GeneID:1014376;Name=NP_688560.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688560.1;transl_table=11
NC_004116.1	RefSeq	gene	1576754	1577846	.	-	.	ID=gene1665;Dbxref=GeneID:1014377;Name=serC;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to SP:P52877 PID:1256204%3B identified by sequence similarity%3B phosphoserine aminotransferase%2C authentic frameshift;gbkey=Gene;gene=serC;gene_biotype=other;locus_tag=SAG1568
NC_004116.1	RefSeq	gene	1577979	1578614	.	+	.	ID=gene1666;Dbxref=GeneID:1014378;Name=SAG1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1569
NC_004116.1	RefSeq	CDS	1577979	1578614	.	+	0	ID=cds1526;Parent=gene1666;Dbxref=Genbank:NP_688561.1,GeneID:1014378;Name=NP_688561.1;Note=similar to SP:P46719%3B identified by sequence similarity;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=NP_688561.1;transl_table=11
NC_004116.1	RefSeq	gene	1578658	1578762	.	-	.	ID=gene1667;Dbxref=GeneID:1014379;Name=SAG1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1570
NC_004116.1	RefSeq	CDS	1578658	1578762	.	-	0	ID=cds1527;Parent=gene1667;Dbxref=Genbank:NP_688562.1,GeneID:1014379;Name=NP_688562.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688562.1;transl_table=11
NC_004116.1	RefSeq	gene	1578747	1578908	.	+	.	ID=gene1668;Dbxref=GeneID:1014380;Name=SAG1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1571
NC_004116.1	RefSeq	CDS	1578747	1578908	.	+	0	ID=cds1528;Parent=gene1668;Dbxref=Genbank:NP_688563.1,GeneID:1014380;Name=NP_688563.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688563.1;transl_table=11
NC_004116.1	RefSeq	gene	1578884	1579747	.	-	.	ID=gene1669;Dbxref=GeneID:1014381;Name=SAG1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1572
NC_004116.1	RefSeq	CDS	1578884	1579747	.	-	0	ID=cds1529;Parent=gene1669;Dbxref=Genbank:NP_688564.1,GeneID:1014381;Name=NP_688564.1;Note=identified by match to PFAM protein family HMM PF00590;gbkey=CDS;product=tetrapyrrole methylase family protein;protein_id=NP_688564.1;transl_table=11
NC_004116.1	RefSeq	gene	1579753	1580079	.	-	.	ID=gene1670;Dbxref=GeneID:1014382;Name=SAG1573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1573
NC_004116.1	RefSeq	CDS	1579753	1580079	.	-	0	ID=cds1530;Parent=gene1670;Dbxref=Genbank:NP_688565.1,GeneID:1014382;Name=NP_688565.1;Note=in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation%3B interacts with DnaN and DnaA;gbkey=CDS;product=DNA replication intiation control protein YabA;protein_id=NP_688565.1;transl_table=11
NC_004116.1	RefSeq	gene	1580109	1580972	.	-	.	ID=gene1671;Dbxref=GeneID:1014383;Name=SAG1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1574
NC_004116.1	RefSeq	CDS	1580109	1580972	.	-	0	ID=cds1531;Parent=gene1671;Dbxref=Genbank:NP_688566.1,GeneID:1014383;Name=NP_688566.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA.;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=NP_688566.1;transl_table=11
NC_004116.1	RefSeq	gene	1580992	1581627	.	-	.	ID=gene1672;Dbxref=GeneID:1014384;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=SAG1575
NC_004116.1	RefSeq	CDS	1580992	1581627	.	-	0	ID=cds1532;Parent=gene1672;Dbxref=Genbank:NP_688567.1,GeneID:1014384;Name=NP_688567.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=NP_688567.1;transl_table=11
NC_004116.1	RefSeq	gene	1582200	1583003	.	+	.	ID=gene1673;Dbxref=GeneID:1014385;Name=SAG1576;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by match to PFAM protein family HMM PF00665%3B transposase%2C IS30 family%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1576
NC_004116.1	RefSeq	gene	1583268	1583927	.	-	.	ID=gene1674;Dbxref=GeneID:1014386;Name=SAG1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1577
NC_004116.1	RefSeq	CDS	1583268	1583927	.	-	0	ID=cds1533;Parent=gene1674;Dbxref=Genbank:NP_688568.1,GeneID:1014386;Name=NP_688568.1;Note=identified by match to PFAM protein family HMM PF00571;gbkey=CDS;product=AcuB family protein;protein_id=NP_688568.1;transl_table=11
NC_004116.1	RefSeq	gene	1583946	1584656	.	-	.	ID=gene1675;Dbxref=GeneID:1014387;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=SAG1578
NC_004116.1	RefSeq	CDS	1583946	1584656	.	-	0	ID=cds1534;Parent=gene1675;Dbxref=Genbank:NP_688569.1,GeneID:1014387;Name=NP_688569.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=livF;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=NP_688569.1;transl_table=11
NC_004116.1	RefSeq	gene	1584656	1585420	.	-	.	ID=gene1676;Dbxref=GeneID:1014388;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=SAG1579
NC_004116.1	RefSeq	CDS	1584656	1585420	.	-	0	ID=cds1535;Parent=gene1676;Dbxref=Genbank:NP_688570.1,GeneID:1014388;Name=NP_688570.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=livG;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=NP_688570.1;transl_table=11
NC_004116.1	RefSeq	gene	1585421	1586374	.	-	.	ID=gene1677;Dbxref=GeneID:1014389;Name=SAG1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1580
NC_004116.1	RefSeq	CDS	1585421	1586374	.	-	0	ID=cds1536;Parent=gene1677;Dbxref=Genbank:NP_688571.1,GeneID:1014389;Name=NP_688571.1;Note=identified by match to PFAM protein family HMM PF02653;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=NP_688571.1;transl_table=11
NC_004116.1	RefSeq	gene	1586377	1587246	.	-	.	ID=gene1678;Dbxref=GeneID:1014390;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=SAG1581
NC_004116.1	RefSeq	CDS	1586377	1587246	.	-	0	ID=cds1537;Parent=gene1678;Dbxref=Genbank:NP_688572.1,GeneID:1014390;Name=NP_688572.1;Note=identified by match to PFAM protein family HMM PF02653;gbkey=CDS;gene=livH;product=branched-chain amino acid ABC transporter permease;protein_id=NP_688572.1;transl_table=11
NC_004116.1	RefSeq	gene	1587352	1588518	.	-	.	ID=gene1679;Dbxref=GeneID:1014391;Name=SAG1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1582
NC_004116.1	RefSeq	CDS	1587352	1588518	.	-	0	ID=cds1538;Parent=gene1679;Dbxref=Genbank:NP_688573.1,GeneID:1014391;Name=NP_688573.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=NP_688573.1;transl_table=11
NC_004116.1	RefSeq	gene	1588673	1588918	.	-	.	ID=gene1680;Dbxref=GeneID:1014392;Name=SAG1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1583
NC_004116.1	RefSeq	CDS	1588673	1588918	.	-	0	ID=cds1539;Parent=gene1680;Dbxref=Genbank:NP_688574.1,GeneID:1014392;Name=NP_688574.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688574.1;transl_table=11
NC_004116.1	RefSeq	gene	1589092	1590225	.	-	.	ID=gene1681;Dbxref=GeneID:1014393;Name=SAG1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1584
NC_004116.1	RefSeq	CDS	1589092	1590225	.	-	0	ID=cds1540;Parent=gene1681;Dbxref=Genbank:NP_688575.1,GeneID:1014393;Name=NP_688575.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1548 transposase;protein_id=NP_688575.1;transl_table=11
NC_004116.1	RefSeq	gene	1590344	1590934	.	-	.	ID=gene1682;Dbxref=GeneID:1014394;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=SAG1585
NC_004116.1	RefSeq	CDS	1590344	1590934	.	-	0	ID=cds1541;Parent=gene1682;Dbxref=Genbank:NP_688576.1,GeneID:1014394;Name=NP_688576.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit;protein_id=NP_688576.1;transl_table=11
NC_004116.1	RefSeq	gene	1591059	1591688	.	-	.	ID=gene1683;Dbxref=GeneID:1014395;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SAG1586
NC_004116.1	RefSeq	CDS	1591059	1591688	.	-	0	ID=cds1542;Parent=gene1683;Dbxref=Genbank:NP_688577.1,GeneID:1014395;Name=NP_688577.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=NP_688577.1;transl_table=11
NC_004116.1	RefSeq	gene	1591798	1592967	.	-	.	ID=gene1684;Dbxref=GeneID:1014396;Name=SAG1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1587
NC_004116.1	RefSeq	CDS	1591798	1592967	.	-	0	ID=cds1543;Parent=gene1684;Dbxref=Genbank:NP_688578.1,GeneID:1014396;Name=NP_688578.1;Note=identified by match to PFAM protein family HMM PF00155;gbkey=CDS;product=class I aminotransferase;protein_id=NP_688578.1;transl_table=11
NC_004116.1	RefSeq	gene	1593103	1593651	.	-	.	ID=gene1685;Dbxref=GeneID:1014397;Name=SAG1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1588
NC_004116.1	RefSeq	CDS	1593103	1593651	.	-	0	ID=cds1544;Parent=gene1685;Dbxref=Genbank:NP_688579.1,GeneID:1014397;Name=NP_688579.1;Note=identified by match to PFAM protein family HMM PF00588;gbkey=CDS;product=RNA methyltransferase;protein_id=NP_688579.1;transl_table=11
NC_004116.1	RefSeq	gene	1593824	1595176	.	-	.	ID=gene1686;Dbxref=GeneID:1014398;Name=SAG1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1589
NC_004116.1	RefSeq	CDS	1593824	1595176	.	-	0	ID=cds1545;Parent=gene1686;Dbxref=Genbank:NP_688580.1,GeneID:1014398;Name=NP_688580.1;Note=identified by match to PFAM protein family HMM PF00324;gbkey=CDS;product=amino acid permease;protein_id=NP_688580.1;transl_table=11
NC_004116.1	RefSeq	gene	1595382	1596731	.	+	.	ID=gene1687;Dbxref=GeneID:1014399;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=SAG1590
NC_004116.1	RefSeq	CDS	1595382	1596731	.	+	0	ID=cds1546;Parent=gene1687;Dbxref=Genbank:NP_688581.1,GeneID:1014399;Name=NP_688581.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=NP_688581.1;transl_table=11
NC_004116.1	RefSeq	gene	1596748	1598175	.	+	.	ID=gene1688;Dbxref=GeneID:1014400;Name=SAG1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1591
NC_004116.1	RefSeq	CDS	1596748	1598175	.	+	0	ID=cds1547;Parent=gene1688;Dbxref=Genbank:NP_688582.1,GeneID:1014400;Name=NP_688582.1;Note=identified by match to PFAM protein family HMM PF02386;gbkey=CDS;product=cation uptake protein;protein_id=NP_688582.1;transl_table=11
NC_004116.1	RefSeq	gene	1598199	1598450	.	-	.	ID=gene1689;Dbxref=GeneID:1014401;Name=SAG1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1592
NC_004116.1	RefSeq	CDS	1598199	1598450	.	-	0	ID=cds1548;Parent=gene1689;Dbxref=Genbank:NP_688583.1,GeneID:1014401;Name=NP_688583.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688583.1;transl_table=11
NC_004116.1	RefSeq	gene	1598450	1599172	.	-	.	ID=gene1690;Dbxref=GeneID:1014402;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=SAG1593
NC_004116.1	RefSeq	CDS	1598450	1599172	.	-	0	ID=cds1549;Parent=gene1690;Dbxref=Genbank:NP_688584.1,GeneID:1014402;Name=NP_688584.1;Note=identified by match to PFAM protein family HMM PF00849;gbkey=CDS;gene=rluB;product=ribosomal large subunit pseudouridine synthase B;protein_id=NP_688584.1;transl_table=11
NC_004116.1	RefSeq	gene	1599162	1599746	.	-	.	ID=gene1691;Dbxref=GeneID:1014403;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=SAG1594
NC_004116.1	RefSeq	CDS	1599162	1599746	.	-	0	ID=cds1550;Parent=gene1691;Dbxref=Genbank:NP_688585.1,GeneID:1014403;Name=NP_688585.1;Note=functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpA%3B forms a homodimer;gbkey=CDS;gene=scpB;product=segregation and condensation protein B;protein_id=NP_688585.1;transl_table=11
NC_004116.1	RefSeq	gene	1599743	1600450	.	-	.	ID=gene1692;Dbxref=GeneID:1014404;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=SAG1595
NC_004116.1	RefSeq	CDS	1599743	1600450	.	-	0	ID=cds1551;Parent=gene1692;Dbxref=Genbank:NP_688586.1,GeneID:1014404;Name=NP_688586.1;Note=functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpB;gbkey=CDS;gene=scpA;product=segregation and condensation protein A;protein_id=NP_688586.1;transl_table=11
NC_004116.1	RefSeq	gene	1600450	1601190	.	-	.	ID=gene1693;Dbxref=GeneID:1014405;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SAG1596
NC_004116.1	RefSeq	CDS	1600450	1601190	.	-	0	ID=cds1552;Parent=gene1693;Dbxref=Genbank:NP_688587.1,GeneID:1014405;Name=NP_688587.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=site-specific tyrosine recombinase XerD;protein_id=NP_688587.1;transl_table=11
NC_004116.1	RefSeq	gene	1601180	1601653	.	-	.	ID=gene1694;Dbxref=GeneID:1014406;Name=SAG1597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1597
NC_004116.1	RefSeq	CDS	1601180	1601653	.	-	0	ID=cds1553;Parent=gene1694;Dbxref=Genbank:NP_688588.1,GeneID:1014406;Name=NP_688588.1;Note=identified by match to PFAM protein family HMM PF00571;gbkey=CDS;product=hypothetical protein;protein_id=NP_688588.1;transl_table=11
NC_004116.1	RefSeq	gene	1601650	1602171	.	-	.	ID=gene1695;Dbxref=GeneID:1014407;Name=SAG1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1598
NC_004116.1	RefSeq	CDS	1601650	1602171	.	-	0	ID=cds1554;Parent=gene1695;Dbxref=Genbank:NP_688589.1,GeneID:1014407;Name=NP_688589.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688589.1;transl_table=11
NC_004116.1	RefSeq	gene	1602153	1603127	.	-	.	ID=gene1696;Dbxref=GeneID:1014408;Name=SAG1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1599
NC_004116.1	RefSeq	CDS	1602153	1603127	.	-	0	ID=cds1555;Parent=gene1696;Dbxref=Genbank:NP_688590.1,GeneID:1014408;Name=NP_688590.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein;protein_id=NP_688590.1;transl_table=11
NC_004116.1	RefSeq	gene	1603124	1603918	.	-	.	ID=gene1697;Dbxref=GeneID:1014409;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=SAG1600
NC_004116.1	RefSeq	CDS	1603124	1603918	.	-	0	ID=cds1556;Parent=gene1697;Dbxref=Genbank:NP_688591.1,GeneID:1014409;Name=NP_688591.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=NP_688591.1;transl_table=11
NC_004116.1	RefSeq	gene	1604093	1604332	.	-	.	ID=gene1698;Dbxref=GeneID:1014410;Name=SAG1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1601
NC_004116.1	RefSeq	CDS	1604093	1604332	.	-	0	ID=cds1557;Parent=gene1698;Dbxref=Genbank:NP_688592.1,GeneID:1014410;Name=NP_688592.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688592.1;transl_table=11
NC_004116.1	RefSeq	gene	1604490	1605032	.	-	.	ID=gene1699;Dbxref=GeneID:1014411;Name=SAG1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1602
NC_004116.1	RefSeq	CDS	1604490	1605032	.	-	0	ID=cds1558;Parent=gene1699;Dbxref=Genbank:NP_688593.1,GeneID:1014411;Name=NP_688593.1;Note=similar to OMNI:NTL01SPL1119%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688593.1;transl_table=11
NC_004116.1	RefSeq	gene	1605094	1605615	.	-	.	ID=gene1700;Dbxref=GeneID:1014412;Name=SAG1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1603
NC_004116.1	RefSeq	CDS	1605094	1605615	.	-	0	ID=cds1559;Parent=gene1700;Dbxref=Genbank:NP_688594.1,GeneID:1014412;Name=NP_688594.1;Note=identified by match to PFAM protein family HMM PF02829;gbkey=CDS;product=biotin repressor family transcriptional regulator;protein_id=NP_688594.1;transl_table=11
NC_004116.1	RefSeq	gene	1605683	1606372	.	-	.	ID=gene1701;Dbxref=GeneID:1014413;Name=SAG1604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1604
NC_004116.1	RefSeq	CDS	1605683	1606372	.	-	0	ID=cds1560;Parent=gene1701;Dbxref=Genbank:NP_688595.1,GeneID:1014413;Name=NP_688595.1;Note=identified by match to PFAM protein family HMM PF01027;gbkey=CDS;product=hypothetical protein;protein_id=NP_688595.1;transl_table=11
NC_004116.1	RefSeq	gene	1606395	1606898	.	-	.	ID=gene1702;Dbxref=GeneID:1014414;Name=SAG1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1605
NC_004116.1	RefSeq	CDS	1606395	1606898	.	-	0	ID=cds1561;Parent=gene1702;Dbxref=Genbank:NP_688596.1,GeneID:1014414;Name=NP_688596.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688596.1;transl_table=11
NC_004116.1	RefSeq	gene	1606936	1607679	.	-	.	ID=gene1703;Dbxref=GeneID:1014415;Name=SAG1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1606
NC_004116.1	RefSeq	CDS	1606936	1607679	.	-	0	ID=cds1562;Parent=gene1703;Dbxref=Genbank:NP_688597.1,GeneID:1014415;Name=NP_688597.1;Note=identified by match to PFAM protein family HMM PF00588;gbkey=CDS;product=RNA methyltransferase;protein_id=NP_688597.1;transl_table=11
NC_004116.1	RefSeq	gene	1607711	1607989	.	+	.	ID=gene1704;Dbxref=GeneID:1014416;Name=SAG1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1607
NC_004116.1	RefSeq	CDS	1607711	1607989	.	+	0	ID=cds1563;Parent=gene1704;Dbxref=Genbank:NP_688598.1,GeneID:1014416;Name=NP_688598.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=NP_688598.1;transl_table=11
NC_004116.1	RefSeq	gene	1608074	1609006	.	+	.	ID=gene1705;Dbxref=GeneID:1014417;Name=SAG1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1608
NC_004116.1	RefSeq	CDS	1608074	1609006	.	+	0	ID=cds1564;Parent=gene1705;Dbxref=Genbank:NP_688599.1,GeneID:1014417;Name=NP_688599.1;Note=involved in biogenesis of membrane proteins%3B Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site;gbkey=CDS;product=OxaA-like protein precursor;protein_id=NP_688599.1;transl_table=11
NC_004116.1	RefSeq	gene	1609206	1609871	.	-	.	ID=gene1706;Dbxref=GeneID:1014418;Name=SAG1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1609
NC_004116.1	RefSeq	CDS	1609206	1609871	.	-	0	ID=cds1565;Parent=gene1706;Dbxref=Genbank:NP_688600.1,GeneID:1014418;Name=NP_688600.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_688600.1;transl_table=11
NC_004116.1	RefSeq	gene	1609895	1610752	.	-	.	ID=gene1707;Dbxref=GeneID:1014419;Name=SAG1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1610
NC_004116.1	RefSeq	CDS	1609895	1610752	.	-	0	ID=cds1566;Parent=gene1707;Dbxref=Genbank:NP_688601.1,GeneID:1014419;Name=NP_688601.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=NP_688601.1;transl_table=11
NC_004116.1	RefSeq	gene	1610913	1612373	.	-	.	ID=gene1708;Dbxref=GeneID:1014420;Name=SAG1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1611
NC_004116.1	RefSeq	CDS	1610913	1612373	.	-	0	ID=cds1567;Parent=gene1708;Dbxref=Genbank:NP_688602.1,GeneID:1014420;Name=NP_688602.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=NP_688602.1;transl_table=11
NC_004116.1	RefSeq	gene	1612476	1612958	.	-	.	ID=gene1709;Dbxref=GeneID:1014421;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SAG1612
NC_004116.1	RefSeq	CDS	1612476	1612958	.	-	0	ID=cds1568;Parent=gene1709;Dbxref=Genbank:NP_688603.1,GeneID:1014421;Name=NP_688603.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=NP_688603.1;transl_table=11
NC_004116.1	RefSeq	gene	1613031	1614833	.	-	.	ID=gene1710;Dbxref=GeneID:1014422;Name=SAG1613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1613
NC_004116.1	RefSeq	CDS	1613031	1614833	.	-	0	ID=cds1569;Parent=gene1710;Dbxref=Genbank:NP_688604.1,GeneID:1014422;Name=NP_688604.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688604.1;transl_table=11
NC_004116.1	RefSeq	gene	1614920	1615423	.	-	.	ID=gene1711;Dbxref=GeneID:1014423;Name=SAG1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1614
NC_004116.1	RefSeq	CDS	1614920	1615423	.	-	0	ID=cds1570;Parent=gene1711;Dbxref=Genbank:NP_688605.1,GeneID:1014423;Name=NP_688605.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688605.1;transl_table=11
NC_004116.1	RefSeq	gene	1615509	1616840	.	-	.	ID=gene1712;Dbxref=GeneID:1014424;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=SAG1615
NC_004116.1	RefSeq	CDS	1615509	1616840	.	-	0	ID=cds1571;Parent=gene1712;Dbxref=Genbank:NP_688606.1,GeneID:1014424;Name=NP_688606.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=NP_688606.1;transl_table=11
NC_004116.1	RefSeq	gene	1616850	1617467	.	-	.	ID=gene1713;Dbxref=GeneID:1014425;Name=SAG1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1616
NC_004116.1	RefSeq	CDS	1616850	1617467	.	-	0	ID=cds1572;Parent=gene1713;Dbxref=Genbank:NP_688607.1,GeneID:1014425;Name=NP_688607.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688607.1;transl_table=11
NC_004116.1	RefSeq	gene	1617472	1617570	.	-	.	ID=gene1714;Dbxref=GeneID:1014426;Name=SAG1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1617
NC_004116.1	RefSeq	CDS	1617472	1617570	.	-	0	ID=cds1573;Parent=gene1714;Dbxref=Genbank:NP_688608.1,GeneID:1014426;Name=NP_688608.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688608.1;transl_table=11
NC_004116.1	RefSeq	gene	1617632	1620730	.	-	.	ID=gene1715;Dbxref=GeneID:1014427;Name=SAG1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1618
NC_004116.1	RefSeq	CDS	1617632	1620730	.	-	0	ID=cds1574;Parent=gene1715;Dbxref=Genbank:NP_688609.1,GeneID:1014427;Name=NP_688609.1;Note=identified by match to PFAM protein family HMM PF00176%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=Snf2 family protein;protein_id=NP_688609.1;transl_table=11
NC_004116.1	RefSeq	gene	1620893	1622026	.	-	.	ID=gene1716;Dbxref=GeneID:1014428;Name=SAG1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1619
NC_004116.1	RefSeq	CDS	1620893	1622026	.	-	0	ID=cds1575;Parent=gene1716;Dbxref=Genbank:NP_688610.1,GeneID:1014428;Name=NP_688610.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1548 transposase;protein_id=NP_688610.1;transl_table=11
NC_004116.1	RefSeq	gene	1622211	1623521	.	-	.	ID=gene1717;Dbxref=GeneID:1014429;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;gene_synonym=yfgK,yphC;locus_tag=SAG1620
NC_004116.1	RefSeq	CDS	1622211	1623521	.	-	0	ID=cds1576;Parent=gene1717;Dbxref=Genbank:NP_688611.1,GeneID:1014429;Name=NP_688611.1;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;gbkey=CDS;gene=engA;product=GTP-binding protein EngA;protein_id=NP_688611.1;transl_table=11
NC_004116.1	RefSeq	gene	1623569	1624471	.	-	.	ID=gene1718;Dbxref=GeneID:1014430;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=SAG1621
NC_004116.1	RefSeq	CDS	1623569	1624471	.	-	0	ID=cds1577;Parent=gene1718;Dbxref=Genbank:NP_688612.1,GeneID:1014430;Name=NP_688612.1;Note=Primosomal protein that may act to load helicase DnaC during DNA replication;gbkey=CDS;gene=dnaI;product=primosomal protein DnaI;protein_id=NP_688612.1;transl_table=11
NC_004116.1	RefSeq	gene	1624468	1625643	.	-	.	ID=gene1719;Dbxref=GeneID:1014431;Name=SAG1622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1622
NC_004116.1	RefSeq	CDS	1624468	1625643	.	-	0	ID=cds1578;Parent=gene1719;Dbxref=Genbank:NP_688613.1,GeneID:1014431;Name=NP_688613.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688613.1;transl_table=11
NC_004116.1	RefSeq	gene	1625643	1626122	.	-	.	ID=gene1720;Dbxref=GeneID:1014432;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=SAG1623
NC_004116.1	RefSeq	CDS	1625643	1626122	.	-	0	ID=cds1579;Parent=gene1720;Dbxref=Genbank:NP_688614.1,GeneID:1014432;Name=NP_688614.1;gbkey=CDS;gene=nrdR;product=NrdR family transcriptional regulator;protein_id=NP_688614.1;transl_table=11
NC_004116.1	RefSeq	gene	1626271	1627776	.	-	.	ID=gene1721;Dbxref=GeneID:1014433;Name=csrS;gbkey=Gene;gene=csrS;gene_biotype=protein_coding;locus_tag=SAG1624
NC_004116.1	RefSeq	CDS	1626271	1627776	.	-	0	ID=cds1580;Parent=gene1721;Dbxref=Genbank:NP_688615.1,GeneID:1014433;Name=NP_688615.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;gene=csrS;product=sensor histidine kinase CsrS;protein_id=NP_688615.1;transl_table=11
NC_004116.1	RefSeq	gene	1627766	1628455	.	-	.	ID=gene1722;Dbxref=GeneID:1014434;Name=csrR;gbkey=Gene;gene=csrR;gene_biotype=protein_coding;locus_tag=SAG1625
NC_004116.1	RefSeq	CDS	1627766	1628455	.	-	0	ID=cds1581;Parent=gene1722;Dbxref=Genbank:NP_688616.1,GeneID:1014434;Name=NP_688616.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;gene=csrR;product=DNA-binding response regulator CsrR;protein_id=NP_688616.1;transl_table=11
NC_004116.1	RefSeq	gene	1628690	1629223	.	-	.	ID=gene1723;Dbxref=GeneID:1014435;Name=SAG1626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1626
NC_004116.1	RefSeq	CDS	1628690	1629223	.	-	0	ID=cds1582;Parent=gene1723;Dbxref=Genbank:NP_688617.1,GeneID:1014435;Name=NP_688617.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688617.1;transl_table=11
NC_004116.1	RefSeq	gene	1629328	1630218	.	-	.	ID=gene1724;Dbxref=GeneID:1014436;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=SAG1627
NC_004116.1	RefSeq	CDS	1629328	1630218	.	-	0	ID=cds1583;Parent=gene1724;Dbxref=Genbank:NP_688618.1,GeneID:1014436;Name=NP_688618.1;Note=metalloprotease;gbkey=CDS;gene=htpX;product=heat shock protein HtpX;protein_id=NP_688618.1;transl_table=11
NC_004116.1	RefSeq	gene	1630239	1630793	.	-	.	ID=gene1725;Dbxref=GeneID:1014437;Name=lemA;gbkey=Gene;gene=lemA;gene_biotype=protein_coding;locus_tag=SAG1628
NC_004116.1	RefSeq	CDS	1630239	1630793	.	-	0	ID=cds1584;Parent=gene1725;Dbxref=Genbank:NP_688619.1,GeneID:1014437;Name=NP_688619.1;Note=similar to OMNI:SP1284%3B identified by sequence similarity;gbkey=CDS;gene=lemA;product=hypothetical protein;protein_id=NP_688619.1;transl_table=11
NC_004116.1	RefSeq	gene	1630921	1631634	.	+	.	ID=gene1726;Dbxref=GeneID:1014438;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=SAG1629
NC_004116.1	RefSeq	CDS	1630921	1631634	.	+	0	ID=cds1585;Parent=gene1726;Dbxref=Genbank:NP_688620.1,GeneID:1014438;Name=NP_688620.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=NP_688620.1;transl_table=11
NC_004116.1	RefSeq	gene	1631649	1633028	.	+	.	ID=gene1727;Dbxref=GeneID:1014439;Name=SAG1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1630
NC_004116.1	RefSeq	CDS	1631649	1633028	.	+	0	ID=cds1586;Parent=gene1727;Dbxref=Genbank:NP_688621.1,GeneID:1014439;Name=NP_688621.1;Note=identified by match to PFAM protein family HMM PF02386;gbkey=CDS;product=sodium transport family protein;protein_id=NP_688621.1;transl_table=11
NC_004116.1	RefSeq	gene	1633041	1633712	.	+	.	ID=gene1728;Dbxref=GeneID:1014440;Name=SAG1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1631
NC_004116.1	RefSeq	CDS	1633041	1633712	.	+	0	ID=cds1587;Parent=gene1728;Dbxref=Genbank:NP_688622.1,GeneID:1014440;Name=NP_688622.1;Note=identified by match to PFAM protein family HMM PF02254;gbkey=CDS;product=Trk family potassium uptake protein;protein_id=NP_688622.1;transl_table=11
NC_004116.1	RefSeq	gene	1633747	1634577	.	-	.	ID=gene1729;Dbxref=GeneID:1014441;Name=SAG1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1632
NC_004116.1	RefSeq	CDS	1633747	1634577	.	-	0	ID=cds1588;Parent=gene1729;Dbxref=Genbank:NP_688623.1,GeneID:1014441;Name=NP_688623.1;Note=identified by match to PFAM protein family HMM PF02361;gbkey=CDS;product=cobalt transport family protein;protein_id=NP_688623.1;transl_table=11
NC_004116.1	RefSeq	gene	1634570	1636246	.	-	.	ID=gene1730;Dbxref=GeneID:1014442;Name=SAG1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1633
NC_004116.1	RefSeq	CDS	1634570	1636246	.	-	0	ID=cds1589;Parent=gene1730;Dbxref=Genbank:NP_688624.1,GeneID:1014442;Name=NP_688624.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688624.1;transl_table=11
NC_004116.1	RefSeq	gene	1636263	1636811	.	-	.	ID=gene1731;Dbxref=GeneID:1014443;Name=SAG1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1634
NC_004116.1	RefSeq	CDS	1636263	1636811	.	-	0	ID=cds1590;Parent=gene1731;Dbxref=Genbank:NP_688625.2,GeneID:1014443;Name=NP_688625.2;gbkey=CDS;product=hypothetical protein;protein_id=NP_688625.2;transl_table=11
NC_004116.1	RefSeq	gene	1636980	1638188	.	-	.	ID=gene1732;Dbxref=GeneID:1014444;Name=SAG1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1635
NC_004116.1	RefSeq	CDS	1636980	1638188	.	-	0	ID=cds1591;Parent=gene1732;Dbxref=Genbank:NP_688626.1,GeneID:1014444;Name=NP_688626.1;Note=involved in the import of serine and threonine coupled with the import of sodium;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=NP_688626.1;transl_table=11
NC_004116.1	RefSeq	gene	1638364	1639731	.	+	.	ID=gene1733;Dbxref=GeneID:1014445;Name=brnQ-2;gbkey=Gene;gene=brnQ-2;gene_biotype=protein_coding;locus_tag=SAG1636
NC_004116.1	RefSeq	CDS	1638364	1639731	.	+	0	ID=cds1592;Parent=gene1733;Dbxref=Genbank:NP_688627.1,GeneID:1014445;Name=NP_688627.1;Note=identified by match to TIGR protein family HMM TIGR00796;gbkey=CDS;gene=brnQ-2;product=branched-chain amino acid transport system II carrier protein;protein_id=NP_688627.1;transl_table=11
NC_004116.1	RefSeq	gene	1639845	1640900	.	+	.	ID=gene1734;Dbxref=GeneID:1014446;Name=adh;gbkey=Gene;gene=adh;gene_biotype=protein_coding;locus_tag=SAG1637
NC_004116.1	RefSeq	CDS	1639845	1640900	.	+	0	ID=cds1593;Parent=gene1734;Dbxref=Genbank:NP_688628.1,GeneID:1014446;Name=NP_688628.1;Note=identified by match to PFAM protein family HMM PF00107;gbkey=CDS;gene=adh;product=zinc-containing alcohol dehydrogenase;protein_id=NP_688628.1;transl_table=11
NC_004116.1	RefSeq	gene	1640949	1641641	.	-	.	ID=gene1735;Dbxref=GeneID:1014447;Name=SAG1638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1638
NC_004116.1	RefSeq	CDS	1640949	1641641	.	-	0	ID=cds1594;Parent=gene1735;Dbxref=Genbank:NP_688629.1,GeneID:1014447;Name=NP_688629.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease;protein_id=NP_688629.1;transl_table=11
NC_004116.1	RefSeq	gene	1641638	1642708	.	-	.	ID=gene1736;Dbxref=GeneID:1014448;Name=SAG1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1639
NC_004116.1	RefSeq	CDS	1641638	1642708	.	-	0	ID=cds1595;Parent=gene1736;Dbxref=Genbank:NP_688630.1,GeneID:1014448;Name=NP_688630.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688630.1;transl_table=11
NC_004116.1	RefSeq	gene	1642701	1644077	.	-	.	ID=gene1737;Dbxref=GeneID:1014449;Name=SAG1640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1640
NC_004116.1	RefSeq	CDS	1642701	1644077	.	-	0	ID=cds1596;Parent=gene1737;Dbxref=Genbank:NP_688631.1,GeneID:1014449;Name=NP_688631.1;Note=identified by match to PFAM protein family HMM PF01546;gbkey=CDS;product=hypothetical protein;protein_id=NP_688631.1;transl_table=11
NC_004116.1	RefSeq	gene	1644211	1645035	.	-	.	ID=gene1738;Dbxref=GeneID:1014450;Name=SAG1641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1641
NC_004116.1	RefSeq	CDS	1644211	1645035	.	-	0	ID=cds1597;Parent=gene1738;Dbxref=Genbank:NP_688632.1,GeneID:1014450;Name=NP_688632.1;Note=identified by match to PFAM protein family HMM PF03180%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=YaeC family protein;protein_id=NP_688632.1;transl_table=11
NC_004116.1	RefSeq	gene	1645176	1646009	.	-	.	ID=gene1739;Dbxref=GeneID:1014451;Name=SAG1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1642
NC_004116.1	RefSeq	CDS	1645176	1646009	.	-	0	ID=cds1598;Parent=gene1739;Dbxref=Genbank:NP_688633.1,GeneID:1014451;Name=NP_688633.1;Note=identified by match to PFAM protein family HMM PF00497;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=NP_688633.1;transl_table=11
NC_004116.1	RefSeq	gene	1646111	1646800	.	-	.	ID=gene1740;Dbxref=GeneID:1014452;Name=SAG1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1643
NC_004116.1	RefSeq	CDS	1646111	1646800	.	-	0	ID=cds1599;Parent=gene1740;Dbxref=Genbank:NP_688634.1,GeneID:1014452;Name=NP_688634.1;Note=identified by match to PFAM protein family HMM PF00117;gbkey=CDS;product=glutamine amidotransferase;protein_id=NP_688634.1;transl_table=11
NC_004116.1	RefSeq	gene	1646794	1646907	.	-	.	ID=gene1741;Dbxref=GeneID:1014453;Name=SAG1644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1644
NC_004116.1	RefSeq	CDS	1646794	1646907	.	-	0	ID=cds1600;Parent=gene1741;Dbxref=Genbank:NP_688635.1,GeneID:1014453;Name=NP_688635.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688635.1;transl_table=11
NC_004116.1	RefSeq	gene	1646955	1647671	.	-	.	ID=gene1742;Dbxref=GeneID:1014454;Name=SAG1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1645
NC_004116.1	RefSeq	CDS	1646955	1647671	.	-	0	ID=cds1601;Parent=gene1742;Dbxref=Genbank:NP_688636.1,GeneID:1014454;Name=NP_688636.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688636.1;transl_table=11
NC_004116.1	RefSeq	gene	1647697	1647795	.	-	.	ID=gene1743;Dbxref=GeneID:1014455;Name=SAG1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1646
NC_004116.1	RefSeq	CDS	1647697	1647795	.	-	0	ID=cds1602;Parent=gene1743;Dbxref=Genbank:NP_688637.1,GeneID:1014455;Name=NP_688637.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688637.1;transl_table=11
NC_004116.1	RefSeq	gene	1647789	1648775	.	-	.	ID=gene1744;Dbxref=GeneID:1014456;Name=SAG1647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1647
NC_004116.1	RefSeq	CDS	1647789	1648775	.	-	0	ID=cds1603;Parent=gene1744;Dbxref=Genbank:NP_688638.1,GeneID:1014456;Name=NP_688638.1;Note=similar to DhaK%3B in Lactococcus lactis this protein froms a stable complex with DhaS and activates transcription of the dha operon in the presence of dihydroxyacetone;gbkey=CDS;product=DhaKLM operon coactivator DhaQ;protein_id=NP_688638.1;transl_table=11
NC_004116.1	RefSeq	gene	1648785	1649321	.	-	.	ID=gene1745;Dbxref=GeneID:1014457;Name=SAG1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1648
NC_004116.1	RefSeq	CDS	1648785	1649321	.	-	0	ID=cds1604;Parent=gene1745;Dbxref=Genbank:NP_688639.1,GeneID:1014457;Name=NP_688639.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=NP_688639.1;transl_table=11
NC_004116.1	RefSeq	gene	1649385	1649498	.	+	.	ID=gene1746;Dbxref=GeneID:1014458;Name=SAG1649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1649
NC_004116.1	RefSeq	CDS	1649385	1649498	.	+	0	ID=cds1605;Parent=gene1746;Dbxref=Genbank:NP_688640.1,GeneID:1014458;Name=NP_688640.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688640.1;transl_table=11
NC_004116.1	RefSeq	gene	1649495	1650484	.	+	.	ID=gene1747;Dbxref=GeneID:1014459;Name=SAG1650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1650
NC_004116.1	RefSeq	CDS	1649495	1650484	.	+	0	ID=cds1606;Parent=gene1747;Dbxref=Genbank:NP_688641.1,GeneID:1014459;Name=NP_688641.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaK;protein_id=NP_688641.1;transl_table=11
NC_004116.1	RefSeq	gene	1650522	1651100	.	+	.	ID=gene1748;Dbxref=GeneID:1014460;Name=SAG1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1651
NC_004116.1	RefSeq	CDS	1650522	1651100	.	+	0	ID=cds1607;Parent=gene1748;Dbxref=Genbank:NP_688642.1,GeneID:1014460;Name=NP_688642.1;Note=identified by match to PFAM protein family HMM PF02734;gbkey=CDS;product=dihydroxyacetone kinase family protein;protein_id=NP_688642.1;transl_table=11
NC_004116.1	RefSeq	gene	1651100	1651474	.	+	.	ID=gene1749;Dbxref=GeneID:1014461;Name=SAG1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1652
NC_004116.1	RefSeq	CDS	1651100	1651474	.	+	0	ID=cds1608;Parent=gene1749;Dbxref=Genbank:NP_688643.1,GeneID:1014461;Name=NP_688643.1;gbkey=CDS;product=PTS system mannnose-specific transporter subunit IIA;protein_id=NP_688643.1;transl_table=11
NC_004116.1	RefSeq	gene	1651484	1652197	.	+	.	ID=gene1750;Dbxref=GeneID:1014462;Name=glpF-2;gbkey=Gene;gene=glpF-2;gene_biotype=protein_coding;locus_tag=SAG1653
NC_004116.1	RefSeq	CDS	1651484	1652197	.	+	0	ID=cds1609;Parent=gene1750;Dbxref=Genbank:NP_688644.1,GeneID:1014462;Name=NP_688644.1;Note=identified by match to PFAM protein family HMM PF00230;gbkey=CDS;gene=glpF-2;product=glycerol uptake facilitator protein;protein_id=NP_688644.1;transl_table=11
NC_004116.1	RefSeq	gene	1652462	1652866	.	-	.	ID=gene1751;Dbxref=GeneID:1014463;Name=SAG1654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1654
NC_004116.1	RefSeq	CDS	1652462	1652866	.	-	0	ID=cds1610;Parent=gene1751;Dbxref=Genbank:NP_688645.1,GeneID:1014463;Name=NP_688645.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688645.1;transl_table=11
NC_004116.1	RefSeq	gene	1653005	1653718	.	-	.	ID=gene1752;Dbxref=GeneID:1014464;Name=SAG1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1655
NC_004116.1	RefSeq	CDS	1653005	1653718	.	-	0	ID=cds1611;Parent=gene1752;Dbxref=Genbank:NP_688646.1,GeneID:1014464;Name=NP_688646.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=NP_688646.1;transl_table=11
NC_004116.1	RefSeq	gene	1653811	1654920	.	-	.	ID=gene1753;Dbxref=GeneID:1014465;Name=SAG1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1656
NC_004116.1	RefSeq	CDS	1653811	1654920	.	-	0	ID=cds1612;Parent=gene1753;Dbxref=Genbank:NP_688647.1,GeneID:1014465;Name=NP_688647.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688647.1;transl_table=11
NC_004116.1	RefSeq	gene	1654917	1655168	.	-	.	ID=gene1754;Dbxref=GeneID:1014466;Name=SAG1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1657
NC_004116.1	RefSeq	CDS	1654917	1655168	.	-	0	ID=cds1613;Parent=gene1754;Dbxref=Genbank:NP_688648.1,GeneID:1014466;Name=NP_688648.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688648.1;transl_table=11
NC_004116.1	RefSeq	gene	1655191	1655925	.	-	.	ID=gene1755;Dbxref=GeneID:1014467;Name=SAG1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1658
NC_004116.1	RefSeq	CDS	1655191	1655925	.	-	0	ID=cds1614;Parent=gene1755;Dbxref=Genbank:NP_688649.1,GeneID:1014467;Name=NP_688649.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688649.1;transl_table=11
NC_004116.1	RefSeq	gene	1655991	1656347	.	-	.	ID=gene1756;Dbxref=GeneID:1014468;Name=SAG1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1659
NC_004116.1	RefSeq	CDS	1655991	1656347	.	-	0	ID=cds1615;Parent=gene1756;Dbxref=Genbank:NP_688650.1,GeneID:1014468;Name=NP_688650.1;Note=identified by match to PFAM protein family HMM PF02410;gbkey=CDS;product=iojap-like protein;protein_id=NP_688650.1;transl_table=11
NC_004116.1	RefSeq	gene	1656349	1656870	.	-	.	ID=gene1757;Dbxref=GeneID:1014469;Name=SAG1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1660
NC_004116.1	RefSeq	CDS	1656349	1656870	.	-	0	ID=cds1616;Parent=gene1757;Dbxref=Genbank:NP_688651.1,GeneID:1014469;Name=NP_688651.1;Note=identified by match to PFAM protein family HMM PF00857;gbkey=CDS;product=isochorismatase family protein;protein_id=NP_688651.1;transl_table=11
NC_004116.1	RefSeq	gene	1656933	1657520	.	-	.	ID=gene1758;Dbxref=GeneID:1014470;Name=SAG1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1661
NC_004116.1	RefSeq	CDS	1656933	1657520	.	-	0	ID=cds1617;Parent=gene1758;Dbxref=Genbank:NP_688652.1,GeneID:1014470;Name=NP_688652.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688652.1;transl_table=11
NC_004116.1	RefSeq	gene	1657517	1658149	.	-	.	ID=gene1759;Dbxref=GeneID:1014471;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=SAG1662
NC_004116.1	RefSeq	CDS	1657517	1658149	.	-	0	ID=cds1618;Parent=gene1759;Dbxref=Genbank:NP_688653.1,GeneID:1014471;Name=NP_688653.1;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;gbkey=CDS;gene=nadD;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=NP_688653.1;transl_table=11
NC_004116.1	RefSeq	gene	1658279	1658596	.	-	.	ID=gene1760;Dbxref=GeneID:1014472;Name=SAG1663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1663
NC_004116.1	RefSeq	CDS	1658279	1658596	.	-	0	ID=cds1619;Parent=gene1760;Dbxref=Genbank:NP_688654.1,GeneID:1014472;Name=NP_688654.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688654.1;transl_table=11
NC_004116.1	RefSeq	gene	1658689	1659807	.	-	.	ID=gene1761;Dbxref=GeneID:1014473;Name=SAG1664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1664
NC_004116.1	RefSeq	CDS	1658689	1659807	.	-	0	ID=cds1620;Parent=gene1761;Dbxref=Genbank:NP_688655.1,GeneID:1014473;Name=NP_688655.1;Note=in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis;gbkey=CDS;product=GTP-binding protein YqeH;protein_id=NP_688655.1;transl_table=11
NC_004116.1	RefSeq	gene	1659807	1660340	.	-	.	ID=gene1762;Dbxref=GeneID:1014474;Name=SAG1665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1665
NC_004116.1	RefSeq	CDS	1659807	1660340	.	-	0	ID=cds1621;Parent=gene1762;Dbxref=Genbank:NP_688656.1,GeneID:1014474;Name=NP_688656.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_688656.1;transl_table=11
NC_004116.1	RefSeq	gene	1660451	1661365	.	-	.	ID=gene1763;Dbxref=GeneID:1014475;Name=SAG1666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1666
NC_004116.1	RefSeq	CDS	1660451	1661365	.	-	0	ID=cds1622;Parent=gene1763;Dbxref=Genbank:NP_688657.1,GeneID:1014475;Name=NP_688657.1;Note=identified by match to PFAM protein family HMM PF00892;gbkey=CDS;product=hypothetical protein;protein_id=NP_688657.1;transl_table=11
NC_004116.1	RefSeq	gene	1661495	1662937	.	-	.	ID=gene1764;Dbxref=GeneID:1014476;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=SAG1667
NC_004116.1	RefSeq	CDS	1661495	1662937	.	-	0	ID=cds1623;Parent=gene1764;Dbxref=Genbank:NP_688658.1,GeneID:1014476;Name=NP_688658.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=NP_688658.1;transl_table=11
NC_004116.1	RefSeq	gene	1662937	1664403	.	-	.	ID=gene1765;Dbxref=GeneID:1014477;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=SAG1668
NC_004116.1	RefSeq	CDS	1662937	1664403	.	-	0	ID=cds1624;Parent=gene1765;Dbxref=Genbank:NP_688659.1,GeneID:1014477;Name=NP_688659.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatA;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=NP_688659.1;transl_table=11
NC_004116.1	RefSeq	gene	1664403	1664705	.	-	.	ID=gene1766;Dbxref=GeneID:1014478;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=SAG1669
NC_004116.1	RefSeq	CDS	1664403	1664705	.	-	0	ID=cds1625;Parent=gene1766;Dbxref=Genbank:NP_688660.1,GeneID:1014478;Name=NP_688660.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA%3B some Mycoplasma proteins contain an N-terminal fusion to an unknown domain;gbkey=CDS;gene=gatC;product=aspartyl/glutamyl-tRNA amidotransferase subunit C;protein_id=NP_688660.1;transl_table=11
NC_004116.1	RefSeq	gene	1664843	1667488	.	-	.	ID=gene1767;Dbxref=GeneID:1014479;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=SAG1670
NC_004116.1	RefSeq	CDS	1664843	1667488	.	-	0	ID=cds1626;Parent=gene1767;Dbxref=Genbank:NP_688661.1,GeneID:1014479;Name=NP_688661.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=ppdK;product=pyruvate phosphate dikinase;protein_id=NP_688661.1;transl_table=11
NC_004116.1	RefSeq	gene	1667501	1668331	.	-	.	ID=gene1768;Dbxref=GeneID:1014480;Name=SAG1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1671
NC_004116.1	RefSeq	CDS	1667501	1668331	.	-	0	ID=cds1627;Parent=gene1768;Dbxref=Genbank:NP_688662.1,GeneID:1014480;Name=NP_688662.1;Note=similar to OMNI:NTL01BH1376%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688662.1;transl_table=11
NC_004116.1	RefSeq	gene	1668342	1668854	.	-	.	ID=gene1769;Dbxref=GeneID:1014481;Name=SAG1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1672
NC_004116.1	RefSeq	CDS	1668342	1668854	.	-	0	ID=cds1628;Parent=gene1769;Dbxref=Genbank:NP_688663.1,GeneID:1014481;Name=NP_688663.1;Note=identified by match to PFAM protein family HMM PF00571%3B In pairwise matches%2C the initiation methionine is located 40 residues upstream from the current start site of this gene%3B although there is strong sequence similarity%2C this ORF lacks an initiation codon in that upstream region.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688663.1;transl_table=11
NC_004116.1	RefSeq	gene	1669160	1670125	.	+	.	ID=gene1770;Dbxref=GeneID:1014482;Name=SAG1673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1673
NC_004116.1	RefSeq	CDS	1669160	1670125	.	+	0	ID=cds1629;Parent=gene1770;Dbxref=Genbank:NP_688664.1,GeneID:1014482;Name=NP_688664.1;Note=converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA;gbkey=CDS;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=NP_688664.1;transl_table=11
NC_004116.1	RefSeq	gene	1670172	1670720	.	-	.	ID=gene1771;Dbxref=GeneID:1014483;Name=SAG1674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1674
NC_004116.1	RefSeq	CDS	1670172	1670720	.	-	0	ID=cds1630;Parent=gene1771;Dbxref=Genbank:NP_688665.1,GeneID:1014483;Name=NP_688665.1;Note=identified by match to PFAM protein family HMM PF00857;gbkey=CDS;product=isochorismatase family protein;protein_id=NP_688665.1;transl_table=11
NC_004116.1	RefSeq	gene	1670787	1671572	.	-	.	ID=gene1772;Dbxref=GeneID:1014484;Name=SAG1675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1675
NC_004116.1	RefSeq	CDS	1670787	1671572	.	-	0	ID=cds1631;Parent=gene1772;Dbxref=Genbank:NP_688666.1,GeneID:1014484;Name=NP_688666.1;Note=CodY%3B DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor;gbkey=CDS;product=transcriptional repressor CodY;protein_id=NP_688666.1;transl_table=11
NC_004116.1	RefSeq	gene	1671698	1672909	.	-	.	ID=gene1773;Dbxref=GeneID:1014485;Name=SAG1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1676
NC_004116.1	RefSeq	CDS	1671698	1672909	.	-	0	ID=cds1632;Parent=gene1773;Dbxref=Genbank:NP_688667.1,GeneID:1014485;Name=NP_688667.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=NP_688667.1;transl_table=11
NC_004116.1	RefSeq	gene	1673176	1673628	.	+	.	ID=gene1774;Dbxref=GeneID:1014486;Name=SAG1677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1677
NC_004116.1	RefSeq	CDS	1673176	1673628	.	+	0	ID=cds1633;Parent=gene1774;Dbxref=Genbank:NP_688668.1,GeneID:1014486;Name=NP_688668.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688668.1;transl_table=11
NC_004116.1	RefSeq	gene	1673684	1675066	.	-	.	ID=gene1775;Dbxref=GeneID:1014487;Name=SAG1678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1678
NC_004116.1	RefSeq	CDS	1673684	1675066	.	-	0	ID=cds1634;Parent=gene1775;Dbxref=Genbank:NP_688669.1,GeneID:1014487;Name=NP_688669.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_688669.1;transl_table=11
NC_004116.1	RefSeq	gene	1675135	1676097	.	+	.	ID=gene1776;Dbxref=GeneID:1014488;Name=SAG1679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1679
NC_004116.1	RefSeq	CDS	1675135	1676097	.	+	0	ID=cds1635;Parent=gene1776;Dbxref=Genbank:NP_688670.1,GeneID:1014488;Name=NP_688670.1;Note=identified by match to PFAM protein family HMM PF00710;gbkey=CDS;product=asparaginase;protein_id=NP_688670.1;transl_table=11
NC_004116.1	RefSeq	gene	1676132	1677010	.	-	.	ID=gene1777;Dbxref=GeneID:1014489;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=SAG1680
NC_004116.1	RefSeq	CDS	1676132	1677010	.	-	0	ID=cds1636;Parent=gene1777;Dbxref=Genbank:NP_688671.1,GeneID:1014489;Name=NP_688671.1;Note=identified by match to PFAM protein family HMM PF01488;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=NP_688671.1;transl_table=11
NC_004116.1	RefSeq	gene	1677108	1678022	.	-	.	ID=gene1778;Dbxref=GeneID:1014490;Name=SAG1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1681
NC_004116.1	RefSeq	CDS	1677108	1678022	.	-	0	ID=cds1637;Parent=gene1778;Dbxref=Genbank:NP_688672.1,GeneID:1014490;Name=NP_688672.1;Note=identified by match to PFAM protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=NP_688672.1;transl_table=11
NC_004116.1	RefSeq	gene	1678313	1680328	.	-	.	ID=gene1779;Dbxref=GeneID:1014491;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=SAG1682
NC_004116.1	RefSeq	CDS	1678313	1680328	.	-	0	ID=cds1638;Parent=gene1779;Dbxref=Genbank:NP_688673.1,GeneID:1014491;Name=NP_688673.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase RecG;protein_id=NP_688673.1;transl_table=11
NC_004116.1	RefSeq	gene	1680408	1681946	.	-	.	ID=gene1780;Dbxref=GeneID:1014492;Name=SAG1683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1683
NC_004116.1	RefSeq	CDS	1680408	1681946	.	-	0	ID=cds1639;Parent=gene1780;Dbxref=Genbank:NP_688674.1,GeneID:1014492;Name=NP_688674.1;Note=similar to GP:1399011%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688674.1;transl_table=11
NC_004116.1	RefSeq	gene	1682039	1683139	.	-	.	ID=gene1781;Dbxref=GeneID:1014493;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=SAG1684
NC_004116.1	RefSeq	CDS	1682039	1683139	.	-	0	ID=cds1640;Parent=gene1781;Dbxref=Genbank:NP_688675.1,GeneID:1014493;Name=NP_688675.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=NP_688675.1;transl_table=11
NC_004116.1	RefSeq	gene	1683136	1683495	.	-	.	ID=gene1782;Dbxref=GeneID:1014494;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SAG1685
NC_004116.1	RefSeq	CDS	1683136	1683495	.	-	0	ID=cds1641;Parent=gene1782;Dbxref=Genbank:NP_688676.1,GeneID:1014494;Name=NP_688676.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=4'-phosphopantetheinyl transferase;protein_id=NP_688676.1;transl_table=11
NC_004116.1	RefSeq	gene	1683520	1684527	.	-	.	ID=gene1783;Dbxref=GeneID:1014495;Name=SAG1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1686
NC_004116.1	RefSeq	CDS	1683520	1684527	.	-	0	ID=cds1642;Parent=gene1783;Dbxref=Genbank:NP_688677.1,GeneID:1014495;Name=NP_688677.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=NP_688677.1;transl_table=11
NC_004116.1	RefSeq	gene	1684653	1687181	.	-	.	ID=gene1784;Dbxref=GeneID:1014496;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SAG1687
NC_004116.1	RefSeq	CDS	1684653	1687181	.	-	0	ID=cds1643;Parent=gene1784;Dbxref=Genbank:NP_688678.1,GeneID:1014496;Name=NP_688678.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=preprotein translocase subunit SecA;protein_id=NP_688678.1;transl_table=11
NC_004116.1	RefSeq	gene	1687290	1688237	.	-	.	ID=gene1785;Dbxref=GeneID:1014497;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=SAG1688
NC_004116.1	RefSeq	CDS	1687290	1688237	.	-	0	ID=cds1644;Parent=gene1785;Dbxref=Genbank:NP_688679.1,GeneID:1014497;Name=NP_688679.1;Note=identified by match to PFAM protein family HMM PF01238;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=NP_688679.1;transl_table=11
NC_004116.1	RefSeq	gene	1688355	1689236	.	-	.	ID=gene1786;Dbxref=GeneID:1014498;Name=scrK;gbkey=Gene;gene=scrK;gene_biotype=protein_coding;locus_tag=SAG1689
NC_004116.1	RefSeq	CDS	1688355	1689236	.	-	0	ID=cds1645;Parent=gene1786;Dbxref=Genbank:NP_688680.1,GeneID:1014498;Name=NP_688680.1;Note=identified by match to PFAM protein family HMM PF00480;gbkey=CDS;gene=scrK;product=fructokinase;protein_id=NP_688680.1;transl_table=11
NC_004116.1	RefSeq	gene	1689304	1691223	.	-	.	ID=gene1787;Dbxref=GeneID:1014499;Name=SAG1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1690
NC_004116.1	RefSeq	CDS	1689304	1691223	.	-	0	ID=cds1646;Parent=gene1787;Dbxref=Genbank:NP_688681.1,GeneID:1014499;Name=NP_688681.1;Note=identified by match to PFAM protein family HMM PF00358;gbkey=CDS;product=PTS system transporter subunit IIABC;protein_id=NP_688681.1;transl_table=11
NC_004116.1	RefSeq	gene	1691408	1692847	.	+	.	ID=gene1788;Dbxref=GeneID:1014500;Name=scrB;gbkey=Gene;gene=scrB;gene_biotype=protein_coding;locus_tag=SAG1691
NC_004116.1	RefSeq	CDS	1691408	1692847	.	+	0	ID=cds1647;Parent=gene1788;Dbxref=Genbank:NP_688682.1,GeneID:1014500;Name=NP_688682.1;Note=identified by match to PFAM protein family HMM PF00251;gbkey=CDS;gene=scrB;product=sucrose-6-phosphate hydrolase;protein_id=NP_688682.1;transl_table=11
NC_004116.1	RefSeq	gene	1692849	1693811	.	+	.	ID=gene1789;Dbxref=GeneID:1014501;Name=scrR;gbkey=Gene;gene=scrR;gene_biotype=protein_coding;locus_tag=SAG1692
NC_004116.1	RefSeq	CDS	1692849	1693811	.	+	0	ID=cds1648;Parent=gene1789;Dbxref=Genbank:NP_688683.1,GeneID:1014501;Name=NP_688683.1;Note=identified by match to PFAM protein family HMM PF00356;gbkey=CDS;gene=scrR;product=sucrose operon repressor ScrR;protein_id=NP_688683.1;transl_table=11
NC_004116.1	RefSeq	gene	1693898	1694332	.	-	.	ID=gene1790;Dbxref=GeneID:1014502;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SAG1693
NC_004116.1	RefSeq	CDS	1693898	1694332	.	-	0	ID=cds1649;Parent=gene1790;Dbxref=Genbank:NP_688684.1,GeneID:1014502;Name=NP_688684.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antitermination protein NusB;protein_id=NP_688684.1;transl_table=11
NC_004116.1	RefSeq	gene	1694325	1694714	.	-	.	ID=gene1791;Dbxref=GeneID:1014503;Name=SAG1694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1694
NC_004116.1	RefSeq	CDS	1694325	1694714	.	-	0	ID=cds1650;Parent=gene1791;Dbxref=Genbank:NP_688685.1,GeneID:1014503;Name=NP_688685.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688685.1;transl_table=11
NC_004116.1	RefSeq	gene	1694803	1695363	.	-	.	ID=gene1792;Dbxref=GeneID:1014504;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=SAG1695
NC_004116.1	RefSeq	CDS	1694803	1695363	.	-	0	ID=cds1651;Parent=gene1792;Dbxref=Genbank:NP_688686.1,GeneID:1014504;Name=NP_688686.1;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;gbkey=CDS;gene=efp;product=elongation factor P;protein_id=NP_688686.1;transl_table=11
NC_004116.1	RefSeq	gene	1695394	1695510	.	-	.	ID=gene1793;Dbxref=GeneID:1014505;Name=SAG1696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1696
NC_004116.1	RefSeq	CDS	1695394	1695510	.	-	0	ID=cds1652;Parent=gene1793;Dbxref=Genbank:NP_688687.1,GeneID:1014505;Name=NP_688687.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688687.1;transl_table=11
NC_004116.1	RefSeq	gene	1696092	1696238	.	-	.	ID=gene1794;Dbxref=GeneID:1014506;Name=SAG1697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1697
NC_004116.1	RefSeq	CDS	1696092	1696238	.	-	0	ID=cds1653;Parent=gene1794;Dbxref=Genbank:NP_688688.1,GeneID:1014506;Name=NP_688688.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688688.1;transl_table=11
NC_004116.1	RefSeq	gene	1696291	1696590	.	-	.	ID=gene1795;Dbxref=GeneID:1014507;Name=SAG1698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1698
NC_004116.1	RefSeq	CDS	1696291	1696590	.	-	0	ID=cds1654;Parent=gene1795;Dbxref=Genbank:NP_688689.1,GeneID:1014507;Name=NP_688689.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688689.1;transl_table=11
NC_004116.1	RefSeq	gene	1696643	1696735	.	-	.	ID=gene1796;Dbxref=GeneID:1014508;Name=SAG1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1699
NC_004116.1	RefSeq	CDS	1696643	1696735	.	-	0	ID=cds1655;Parent=gene1796;Dbxref=Genbank:NP_688690.1,GeneID:1014508;Name=NP_688690.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688690.1;transl_table=11
NC_004116.1	RefSeq	gene	1697008	1697238	.	-	.	ID=gene1797;Dbxref=GeneID:1014509;Name=SAG1700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1700
NC_004116.1	RefSeq	CDS	1697008	1697238	.	-	0	ID=cds1656;Parent=gene1797;Dbxref=Genbank:NP_688691.1,GeneID:1014509;Name=NP_688691.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688691.1;transl_table=11
NC_004116.1	RefSeq	gene	1697251	1697421	.	-	.	ID=gene1798;Dbxref=GeneID:1014510;Name=SAG1701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1701
NC_004116.1	RefSeq	CDS	1697251	1697421	.	-	0	ID=cds1657;Parent=gene1798;Dbxref=Genbank:NP_688692.1,GeneID:1014510;Name=NP_688692.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688692.1;transl_table=11
NC_004116.1	RefSeq	gene	1697874	1697999	.	-	.	ID=gene1799;Dbxref=GeneID:1014511;Name=SAG1702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1702
NC_004116.1	RefSeq	CDS	1697874	1697999	.	-	0	ID=cds1658;Parent=gene1799;Dbxref=Genbank:NP_688693.1,GeneID:1014511;Name=NP_688693.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688693.1;transl_table=11
NC_004116.1	RefSeq	gene	1698010	1698174	.	-	.	ID=gene1800;Dbxref=GeneID:1014512;Name=SAG1703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1703
NC_004116.1	RefSeq	CDS	1698010	1698174	.	-	0	ID=cds1659;Parent=gene1800;Dbxref=Genbank:NP_688694.1,GeneID:1014512;Name=NP_688694.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688694.1;transl_table=11
NC_004116.1	RefSeq	gene	1698476	1698928	.	-	.	ID=gene1801;Dbxref=GeneID:1014513;Name=SAG1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1704
NC_004116.1	RefSeq	CDS	1698476	1698928	.	-	0	ID=cds1660;Parent=gene1801;Dbxref=Genbank:NP_688695.1,GeneID:1014513;Name=NP_688695.1;Note=identified by match to PFAM protein family HMM PF00383;gbkey=CDS;product=cytidine/deoxycytidylate deaminase family protein;protein_id=NP_688695.1;transl_table=11
NC_004116.1	RefSeq	gene	1698940	1700007	.	-	.	ID=gene1802;Dbxref=GeneID:1014514;Name=SAG1705;Note=This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact%3B similar to OMNI:SP0187%3B identified by sequence similarity%3B peptidase%2C M24 family%2C authentic point mutation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1705
NC_004116.1	RefSeq	gene	1700107	1700823	.	-	.	ID=gene1803;Dbxref=GeneID:1014515;Name=SAG1706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1706
NC_004116.1	RefSeq	CDS	1700107	1700823	.	-	0	ID=cds1661;Parent=gene1803;Dbxref=Genbank:NP_688696.1,GeneID:1014515;Name=NP_688696.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688696.1;transl_table=11
NC_004116.1	RefSeq	gene	1700825	1702324	.	-	.	ID=gene1804;Dbxref=GeneID:1014516;Name=SAG1707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1707
NC_004116.1	RefSeq	CDS	1700825	1702324	.	-	0	ID=cds1662;Parent=gene1804;Dbxref=Genbank:NP_688697.1,GeneID:1014516;Name=NP_688697.1;Note=identified by match to PFAM protein family HMM PF00083;gbkey=CDS;product=EmrB/QacA family drug resistance transporter;protein_id=NP_688697.1;transl_table=11
NC_004116.1	RefSeq	gene	1702412	1702528	.	-	.	ID=gene1805;Dbxref=GeneID:1014517;Name=SAG1708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1708
NC_004116.1	RefSeq	CDS	1702412	1702528	.	-	0	ID=cds1663;Parent=gene1805;Dbxref=Genbank:NP_688698.1,GeneID:1014517;Name=NP_688698.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688698.1;transl_table=11
NC_004116.1	RefSeq	gene	1702660	1705488	.	-	.	ID=gene1806;Dbxref=GeneID:1014518;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=SAG1709
NC_004116.1	RefSeq	CDS	1702660	1705488	.	-	0	ID=cds1664;Parent=gene1806;Dbxref=Genbank:NP_688699.1,GeneID:1014518;Name=NP_688699.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate;gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=NP_688699.1;transl_table=11
NC_004116.1	RefSeq	gene	1705620	1706291	.	-	.	ID=gene1807;Dbxref=GeneID:1014519;Name=SAG1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1710
NC_004116.1	RefSeq	CDS	1705620	1706291	.	-	0	ID=cds1665;Parent=gene1807;Dbxref=Genbank:NP_688700.1,GeneID:1014519;Name=NP_688700.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688700.1;transl_table=11
NC_004116.1	RefSeq	gene	1706316	1707260	.	-	.	ID=gene1808;Dbxref=GeneID:1014520;Name=SAG1711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1711
NC_004116.1	RefSeq	CDS	1706316	1707260	.	-	0	ID=cds1666;Parent=gene1808;Dbxref=Genbank:NP_688701.1,GeneID:1014520;Name=NP_688701.1;Note=identified by match to PFAM protein family HMM PF01544;gbkey=CDS;product=magnesium transporter CorA family protein;protein_id=NP_688701.1;transl_table=11
NC_004116.1	RefSeq	gene	1707430	1707669	.	-	.	ID=gene1809;Dbxref=GeneID:1014521;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SAG1712
NC_004116.1	RefSeq	CDS	1707430	1707669	.	-	0	ID=cds1667;Parent=gene1809;Dbxref=Genbank:NP_688702.1,GeneID:1014521;Name=NP_688702.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=NP_688702.1;transl_table=11
NC_004116.1	RefSeq	gene	1707714	1708205	.	-	.	ID=gene1810;Dbxref=GeneID:1014522;Name=ssb-3;gbkey=Gene;gene=ssb-3;gene_biotype=protein_coding;locus_tag=SAG1713
NC_004116.1	RefSeq	CDS	1707714	1708205	.	-	0	ID=cds1668;Parent=gene1810;Dbxref=Genbank:NP_688703.1,GeneID:1014522;Name=NP_688703.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;gene=ssb-3;product=single-stranded DNA-binding protein;protein_id=NP_688703.1;transl_table=11
NC_004116.1	RefSeq	gene	1708217	1708504	.	-	.	ID=gene1811;Dbxref=GeneID:1014523;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SAG1714
NC_004116.1	RefSeq	CDS	1708217	1708504	.	-	0	ID=cds1669;Parent=gene1811;Dbxref=Genbank:NP_688704.1,GeneID:1014523;Name=NP_688704.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=NP_688704.1;transl_table=11
NC_004116.1	RefSeq	gene	1709598	1710722	.	+	.	ID=gene1812;Dbxref=GeneID:1014524;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=SAG1715
NC_004116.1	RefSeq	CDS	1709598	1710722	.	+	0	ID=cds1670;Parent=gene1812;Dbxref=Genbank:NP_688705.1,GeneID:1014524;Name=NP_688705.1;Note=identified by match to PFAM protein family HMM PF00730;gbkey=CDS;gene=mutY;product=A/G-specific adenine glycosylase;protein_id=NP_688705.1;transl_table=11
NC_004116.1	RefSeq	gene	1710899	1711492	.	+	.	ID=gene1813;Dbxref=GeneID:1014525;Name=SAG1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1716
NC_004116.1	RefSeq	CDS	1710899	1711492	.	+	0	ID=cds1671;Parent=gene1813;Dbxref=Genbank:NP_688706.1,GeneID:1014525;Name=NP_688706.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_688706.1;transl_table=11
NC_004116.1	RefSeq	gene	1711538	1711852	.	-	.	ID=gene1814;Dbxref=GeneID:1014526;Name=trx;gbkey=Gene;gene=trx;gene_biotype=protein_coding;locus_tag=SAG1717
NC_004116.1	RefSeq	CDS	1711538	1711852	.	-	0	ID=cds1672;Parent=gene1814;Dbxref=Genbank:NP_688707.1,GeneID:1014526;Name=NP_688707.1;Note=identified by match to PFAM protein family HMM PF00085;gbkey=CDS;gene=trx;product=thioredoxin;protein_id=NP_688707.1;transl_table=11
NC_004116.1	RefSeq	gene	1711933	1712433	.	-	.	ID=gene1815;Dbxref=GeneID:1014527;Name=SAG1718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1718
NC_004116.1	RefSeq	CDS	1711933	1712433	.	-	0	ID=cds1673;Parent=gene1815;Dbxref=Genbank:NP_688708.1,GeneID:1014527;Name=NP_688708.1;Note=identified by match to PFAM protein family HMM PF01569;gbkey=CDS;product=PAP2 family protein;protein_id=NP_688708.1;transl_table=11
NC_004116.1	RefSeq	gene	1712437	1714776	.	-	.	ID=gene1816;Dbxref=GeneID:1014528;Name=SAG1719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1719
NC_004116.1	RefSeq	CDS	1712437	1714776	.	-	0	ID=cds1674;Parent=gene1816;Dbxref=Genbank:NP_688709.1,GeneID:1014528;Name=NP_688709.1;Note=identified by match to PFAM protein family HMM PF00488%3B Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.;gbkey=CDS;product=MutS2 family protein;protein_id=NP_688709.1;transl_table=11
NC_004116.1	RefSeq	gene	1714861	1715403	.	-	.	ID=gene1817;Dbxref=GeneID:1014529;Name=SAG1720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1720
NC_004116.1	RefSeq	CDS	1714861	1715403	.	-	0	ID=cds1675;Parent=gene1817;Dbxref=Genbank:NP_688710.1,GeneID:1014529;Name=NP_688710.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688710.1;transl_table=11
NC_004116.1	RefSeq	gene	1715406	1715717	.	-	.	ID=gene1818;Dbxref=GeneID:1014530;Name=SAG1721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1721
NC_004116.1	RefSeq	CDS	1715406	1715717	.	-	0	ID=cds1676;Parent=gene1818;Dbxref=Genbank:NP_688711.1,GeneID:1014530;Name=NP_688711.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688711.1;transl_table=11
NC_004116.1	RefSeq	gene	1715828	1716721	.	+	.	ID=gene1819;Dbxref=GeneID:1014531;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=SAG1722
NC_004116.1	RefSeq	CDS	1715828	1716721	.	+	0	ID=cds1677;Parent=gene1819;Dbxref=Genbank:NP_688712.1,GeneID:1014531;Name=NP_688712.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhC;product=ribonuclease HIII;protein_id=NP_688712.1;transl_table=11
NC_004116.1	RefSeq	gene	1716737	1717330	.	+	.	ID=gene1820;Dbxref=GeneID:1014532;Name=SAG1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1723
NC_004116.1	RefSeq	CDS	1716737	1717330	.	+	0	ID=cds1678;Parent=gene1820;Dbxref=Genbank:NP_688713.1,GeneID:1014532;Name=NP_688713.1;Note=identified by match to PFAM protein family HMM PF00461;gbkey=CDS;product=signal peptidase I;protein_id=NP_688713.1;transl_table=11
NC_004116.1	RefSeq	gene	1717459	1719879	.	+	.	ID=gene1821;Dbxref=GeneID:1014533;Name=SAG1724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1724
NC_004116.1	RefSeq	CDS	1717459	1719879	.	+	0	ID=cds1679;Parent=gene1821;Dbxref=Genbank:NP_688714.1,GeneID:1014533;Name=NP_688714.1;Note=identified by match to TIGR protein family HMM TIGR01448;gbkey=CDS;product=helicase;protein_id=NP_688714.1;transl_table=11
NC_004116.1	RefSeq	gene	1719993	1720475	.	+	.	ID=gene1822;Dbxref=GeneID:1014534;Name=SAG1725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1725
NC_004116.1	RefSeq	CDS	1719993	1720475	.	+	0	ID=cds1680;Parent=gene1822;Dbxref=Genbank:NP_688715.1,GeneID:1014534;Name=NP_688715.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688715.1;transl_table=11
NC_004116.1	RefSeq	gene	1720546	1721640	.	-	.	ID=gene1823;Dbxref=GeneID:1014535;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=SAG1726
NC_004116.1	RefSeq	CDS	1720546	1721640	.	-	0	ID=cds1681;Parent=gene1823;Dbxref=Genbank:NP_688716.1,GeneID:1014535;Name=NP_688716.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;gene=dinP;product=DNA polymerase IV;protein_id=NP_688716.1;transl_table=11
NC_004116.1	RefSeq	gene	1721825	1724137	.	+	.	ID=gene1824;Dbxref=GeneID:1014536;Name=pflD-2;gbkey=Gene;gene=pflD-2;gene_biotype=protein_coding;locus_tag=SAG1727
NC_004116.1	RefSeq	CDS	1721825	1724137	.	+	0	ID=cds1682;Parent=gene1824;Dbxref=Genbank:NP_688717.1,GeneID:1014536;Name=NP_688717.1;Note=identified by match to PFAM protein family HMM PF01228;gbkey=CDS;gene=pflD-2;product=formate acetyltransferase;protein_id=NP_688717.1;transl_table=11
NC_004116.1	RefSeq	gene	1724238	1724612	.	+	.	ID=gene1825;Dbxref=GeneID:1014537;Name=SAG1728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1728
NC_004116.1	RefSeq	CDS	1724238	1724612	.	+	0	ID=cds1683;Parent=gene1825;Dbxref=Genbank:NP_688718.1,GeneID:1014537;Name=NP_688718.1;Note=similar to SP:Q46604%3B identified by sequence similarity;gbkey=CDS;product=FMN-binding protein;protein_id=NP_688718.1;transl_table=11
NC_004116.1	RefSeq	gene	1724647	1725576	.	-	.	ID=gene1826;Dbxref=GeneID:1014538;Name=SAG1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1729
NC_004116.1	RefSeq	CDS	1724647	1725576	.	-	0	ID=cds1684;Parent=gene1826;Dbxref=Genbank:NP_688719.1,GeneID:1014538;Name=NP_688719.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688719.1;transl_table=11
NC_004116.1	RefSeq	gene	1725573	1726328	.	-	.	ID=gene1827;Dbxref=GeneID:1014539;Name=SAG1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1730
NC_004116.1	RefSeq	CDS	1725573	1726328	.	-	0	ID=cds1685;Parent=gene1827;Dbxref=Genbank:NP_688720.1,GeneID:1014539;Name=NP_688720.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688720.1;transl_table=11
NC_004116.1	RefSeq	gene	1726453	1727349	.	+	.	ID=gene1828;Dbxref=GeneID:1014540;Name=SAG1731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1731
NC_004116.1	RefSeq	CDS	1726453	1727349	.	+	0	ID=cds1686;Parent=gene1828;Dbxref=Genbank:NP_688721.1,GeneID:1014540;Name=NP_688721.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688721.1;transl_table=11
NC_004116.1	RefSeq	gene	1727428	1728276	.	-	.	ID=gene1829;Dbxref=GeneID:1014541;Name=SAG1732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1732
NC_004116.1	RefSeq	CDS	1727428	1728276	.	-	0	ID=cds1687;Parent=gene1829;Dbxref=Genbank:NP_688722.1,GeneID:1014541;Name=NP_688722.1;Note=identified by match to PFAM protein family HMM PF00230;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=NP_688722.1;transl_table=11
NC_004116.1	RefSeq	gene	1728444	1728896	.	-	.	ID=gene1830;Dbxref=GeneID:1014542;Name=SAG1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1733
NC_004116.1	RefSeq	CDS	1728444	1728896	.	-	0	ID=cds1688;Parent=gene1830;Dbxref=Genbank:NP_688723.1,GeneID:1014542;Name=NP_688723.1;Note=identified by match to PFAM protein family HMM PF00582;gbkey=CDS;product=universal stress protein;protein_id=NP_688723.1;transl_table=11
NC_004116.1	RefSeq	gene	1728914	1730116	.	-	.	ID=gene1831;Dbxref=GeneID:1014543;Name=SAG1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1734
NC_004116.1	RefSeq	CDS	1728914	1730116	.	-	0	ID=cds1689;Parent=gene1831;Dbxref=Genbank:NP_688724.1,GeneID:1014543;Name=NP_688724.1;Note=identified by match to PFAM protein family HMM PF00083;gbkey=CDS;product=transporter;protein_id=NP_688724.1;transl_table=11
NC_004116.1	RefSeq	gene	1730273	1730932	.	+	.	ID=gene1832;Dbxref=GeneID:1014544;Name=SAG1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1735
NC_004116.1	RefSeq	CDS	1730273	1730932	.	+	0	ID=cds1690;Parent=gene1832;Dbxref=Genbank:NP_688725.1,GeneID:1014544;Name=NP_688725.1;gbkey=CDS;product=Crp/Fnr family transcriptional regulator;protein_id=NP_688725.1;transl_table=11
NC_004116.1	RefSeq	gene	1730956	1733241	.	+	.	ID=gene1833;Dbxref=GeneID:1014545;Name=pepX;gbkey=Gene;gene=pepX;gene_biotype=protein_coding;locus_tag=SAG1736
NC_004116.1	RefSeq	CDS	1730956	1733241	.	+	0	ID=cds1691;Parent=gene1833;Dbxref=Genbank:NP_688726.1,GeneID:1014545;Name=NP_688726.1;Note=catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue;gbkey=CDS;gene=pepX;product=x-prolyl-dipeptidyl aminopeptidase;protein_id=NP_688726.1;transl_table=11
NC_004116.1	RefSeq	gene	1733245	1733604	.	+	.	ID=gene1834;Dbxref=GeneID:1014546;Name=SAG1737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1737
NC_004116.1	RefSeq	CDS	1733245	1733604	.	+	0	ID=cds1692;Parent=gene1834;Dbxref=Genbank:NP_688727.1,GeneID:1014546;Name=NP_688727.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688727.1;transl_table=11
NC_004116.1	RefSeq	gene	1733650	1734630	.	+	.	ID=gene1835;Dbxref=GeneID:1014547;Name=SAG1738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1738
NC_004116.1	RefSeq	CDS	1733650	1734630	.	+	0	ID=cds1693;Parent=gene1835;Dbxref=Genbank:NP_688728.1,GeneID:1014547;Name=NP_688728.1;Note=identified by match to PFAM protein family HMM PF00348;gbkey=CDS;product=polyprenyl synthetase;protein_id=NP_688728.1;transl_table=11
NC_004116.1	RefSeq	gene	1734715	1736463	.	-	.	ID=gene1836;Dbxref=GeneID:1014548;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=SAG1739
NC_004116.1	RefSeq	CDS	1734715	1736463	.	-	0	ID=cds1694;Parent=gene1836;Dbxref=Genbank:NP_688729.1,GeneID:1014548;Name=NP_688729.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;gene=cydC;product=ABC transporter ATP-binding protein;protein_id=NP_688729.1;transl_table=11
NC_004116.1	RefSeq	gene	1736456	1738174	.	-	.	ID=gene1837;Dbxref=GeneID:1014549;Name=SAG1740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1740
NC_004116.1	RefSeq	CDS	1736456	1738174	.	-	0	ID=cds1695;Parent=gene1837;Dbxref=Genbank:NP_688730.1,GeneID:1014549;Name=NP_688730.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688730.1;transl_table=11
NC_004116.1	RefSeq	gene	1738174	1739193	.	-	.	ID=gene1838;Dbxref=GeneID:1014550;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=SAG1741
NC_004116.1	RefSeq	CDS	1738174	1739193	.	-	0	ID=cds1696;Parent=gene1838;Dbxref=Genbank:NP_688731.1,GeneID:1014550;Name=NP_688731.1;Note=identified by match to PFAM protein family HMM PF02322;gbkey=CDS;gene=cydB;product=cytochrome d ubiquinol oxidase%2C subunit II;protein_id=NP_688731.1;transl_table=11
NC_004116.1	RefSeq	gene	1739194	1740621	.	-	.	ID=gene1839;Dbxref=GeneID:1014551;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=SAG1742
NC_004116.1	RefSeq	CDS	1739194	1740621	.	-	0	ID=cds1697;Parent=gene1839;Dbxref=Genbank:NP_688732.1,GeneID:1014551;Name=NP_688732.1;Note=identified by match to PFAM protein family HMM PF01654;gbkey=CDS;gene=cydA;product=cytochrome d oxidase subunit I;protein_id=NP_688732.1;transl_table=11
NC_004116.1	RefSeq	gene	1740724	1741932	.	-	.	ID=gene1840;Dbxref=GeneID:1014552;Name=SAG1743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1743
NC_004116.1	RefSeq	CDS	1740724	1741932	.	-	0	ID=cds1698;Parent=gene1840;Dbxref=Genbank:NP_688733.1,GeneID:1014552;Name=NP_688733.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;product=pyridine nucleotide-disulfide oxidoreductase family protein;protein_id=NP_688733.1;transl_table=11
NC_004116.1	RefSeq	gene	1741945	1742844	.	-	.	ID=gene1841;Dbxref=GeneID:1014553;Name=SAG1744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1744
NC_004116.1	RefSeq	CDS	1741945	1742844	.	-	0	ID=cds1699;Parent=gene1841;Dbxref=Genbank:NP_688734.1,GeneID:1014553;Name=NP_688734.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=NP_688734.1;transl_table=11
NC_004116.1	RefSeq	gene	1743253	1743699	.	-	.	ID=gene1842;Dbxref=GeneID:1014554;Name=SAG1745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1745
NC_004116.1	RefSeq	CDS	1743253	1743699	.	-	0	ID=cds1700;Parent=gene1842;Dbxref=Genbank:NP_688735.1,GeneID:1014554;Name=NP_688735.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688735.1;transl_table=11
NC_004116.1	RefSeq	gene	1744352	1744459	.	-	.	ID=gene1843;Dbxref=GeneID:1014555;Name=SAG1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1746
NC_004116.1	RefSeq	CDS	1744352	1744459	.	-	0	ID=cds1701;Parent=gene1843;Dbxref=Genbank:NP_688736.1,GeneID:1014555;Name=NP_688736.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688736.1;transl_table=11
NC_004116.1	RefSeq	gene	1744582	1744881	.	+	.	ID=gene1844;Dbxref=GeneID:1014556;Name=SAG1747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1747
NC_004116.1	RefSeq	CDS	1744582	1744881	.	+	0	ID=cds1702;Parent=gene1844;Dbxref=Genbank:NP_688737.1,GeneID:1014556;Name=NP_688737.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688737.1;transl_table=11
NC_004116.1	RefSeq	gene	1745041	1746231	.	+	.	ID=gene1845;Dbxref=GeneID:1014557;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=SAG1748
NC_004116.1	RefSeq	CDS	1745041	1746231	.	+	0	ID=cds1703;Parent=gene1845;Dbxref=Genbank:NP_688738.1,GeneID:1014557;Name=NP_688738.1;Note=identified by match to PFAM protein family HMM PF02353;gbkey=CDS;gene=cfa;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=NP_688738.1;transl_table=11
NC_004116.1	RefSeq	gene	1746301	1747026	.	-	.	ID=gene1846;Dbxref=GeneID:1014558;Name=SAG1749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1749
NC_004116.1	RefSeq	CDS	1746301	1747026	.	-	0	ID=cds1704;Parent=gene1846;Dbxref=Genbank:NP_688739.1,GeneID:1014558;Name=NP_688739.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=NP_688739.1;transl_table=11
NC_004116.1	RefSeq	gene	1747153	1747740	.	-	.	ID=gene1847;Dbxref=GeneID:1014559;Name=SAG1750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1750
NC_004116.1	RefSeq	CDS	1747153	1747740	.	-	0	ID=cds1705;Parent=gene1847;Dbxref=Genbank:NP_688740.1,GeneID:1014559;Name=NP_688740.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=NP_688740.1;transl_table=11
NC_004116.1	RefSeq	gene	1747784	1748320	.	-	.	ID=gene1848;Dbxref=GeneID:1014560;Name=SAG1751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1751
NC_004116.1	RefSeq	CDS	1747784	1748320	.	-	0	ID=cds1706;Parent=gene1848;Dbxref=Genbank:NP_688741.1,GeneID:1014560;Name=NP_688741.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688741.1;transl_table=11
NC_004116.1	RefSeq	gene	1748455	1749627	.	+	.	ID=gene1849;Dbxref=GeneID:1014561;Name=SAG1752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1752
NC_004116.1	RefSeq	CDS	1748455	1749627	.	+	0	ID=cds1707;Parent=gene1849;Dbxref=Genbank:NP_688742.1,GeneID:1014561;Name=NP_688742.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688742.1;transl_table=11
NC_004116.1	RefSeq	gene	1749671	1750453	.	-	.	ID=gene1850;Dbxref=GeneID:1014562;Name=SAG1753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1753
NC_004116.1	RefSeq	CDS	1749671	1750453	.	-	0	ID=cds1708;Parent=gene1850;Dbxref=Genbank:NP_688743.1,GeneID:1014562;Name=NP_688743.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688743.1;transl_table=11
NC_004116.1	RefSeq	gene	1750612	1750881	.	+	.	ID=gene1851;Dbxref=GeneID:1014563;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SAG1754
NC_004116.1	RefSeq	CDS	1750612	1750881	.	+	0	ID=cds1709;Parent=gene1851;Dbxref=Genbank:NP_688744.1,GeneID:1014563;Name=NP_688744.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=NP_688744.1;transl_table=11
NC_004116.1	RefSeq	gene	1751089	1751205	.	+	.	ID=gene1852;Dbxref=GeneID:1014564;Name=SAG1755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1755
NC_004116.1	RefSeq	CDS	1751089	1751205	.	+	0	ID=cds1710;Parent=gene1852;Dbxref=Genbank:NP_688745.1,GeneID:1014564;Name=NP_688745.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688745.1;transl_table=11
NC_004116.1	RefSeq	gene	1751242	1752267	.	-	.	ID=gene1853;Dbxref=GeneID:1014565;Name=SAG1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1756
NC_004116.1	RefSeq	CDS	1751242	1752267	.	-	0	ID=cds1711;Parent=gene1853;Dbxref=Genbank:NP_688746.1,GeneID:1014565;Name=NP_688746.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688746.1;transl_table=11
NC_004116.1	RefSeq	gene	1752387	1753397	.	-	.	ID=gene1854;Dbxref=GeneID:1014566;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;gene_synonym=gcp;locus_tag=SAG1757
NC_004116.1	RefSeq	CDS	1752387	1753397	.	-	0	ID=cds1712;Parent=gene1854;Dbxref=Genbank:NP_688747.1,GeneID:1014566;Name=NP_688747.1;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;gbkey=CDS;gene=gcp;product=DNA-binding/iron metalloprotein/AP endonuclease;protein_id=NP_688747.1;transl_table=11
NC_004116.1	RefSeq	gene	1753473	1753880	.	-	.	ID=gene1855;Dbxref=GeneID:1014567;Name=SAG1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1758
NC_004116.1	RefSeq	CDS	1753473	1753880	.	-	0	ID=cds1713;Parent=gene1855;Dbxref=Genbank:NP_688748.1,GeneID:1014567;Name=NP_688748.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=ribosomal-protein-alanine acetyltransferase;protein_id=NP_688748.1;transl_table=11
NC_004116.1	RefSeq	gene	1753882	1754574	.	-	.	ID=gene1856;Dbxref=GeneID:1014568;Name=SAG1759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1759
NC_004116.1	RefSeq	CDS	1753882	1754574	.	-	0	ID=cds1714;Parent=gene1856;Dbxref=Genbank:NP_688749.1,GeneID:1014568;Name=NP_688749.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688749.1;transl_table=11
NC_004116.1	RefSeq	gene	1754753	1754983	.	+	.	ID=gene1857;Dbxref=GeneID:1014569;Name=SAG1760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1760
NC_004116.1	RefSeq	CDS	1754753	1754983	.	+	0	ID=cds1715;Parent=gene1857;Dbxref=Genbank:NP_688750.1,GeneID:1014569;Name=NP_688750.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688750.1;transl_table=11
NC_004116.1	RefSeq	gene	1755037	1756716	.	+	.	ID=gene1858;Dbxref=GeneID:1014570;Name=SAG1761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1761
NC_004116.1	RefSeq	CDS	1755037	1756716	.	+	0	ID=cds1716;Parent=gene1858;Dbxref=Genbank:NP_688751.1,GeneID:1014570;Name=NP_688751.1;Note=identified by match to PFAM protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=NP_688751.1;transl_table=11
NC_004116.1	RefSeq	gene	1756874	1757383	.	-	.	ID=gene1859;Dbxref=GeneID:1014571;Name=SAG1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1762
NC_004116.1	RefSeq	CDS	1756874	1757383	.	-	0	ID=cds1717;Parent=gene1859;Dbxref=Genbank:NP_688752.1,GeneID:1014571;Name=NP_688752.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688752.1;transl_table=11
NC_004116.1	RefSeq	gene	1757531	1758877	.	-	.	ID=gene1860;Dbxref=GeneID:1014572;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SAG1763
NC_004116.1	RefSeq	CDS	1757531	1758877	.	-	0	ID=cds1718;Parent=gene1860;Dbxref=Genbank:NP_688753.1,GeneID:1014572;Name=NP_688753.1;Note=identified by match to PFAM protein family HMM PF00120;gbkey=CDS;gene=glnA;product=glutamine synthetase%2C type I;protein_id=NP_688753.1;transl_table=11
NC_004116.1	RefSeq	gene	1758911	1759282	.	-	.	ID=gene1861;Dbxref=GeneID:1014573;Name=glnR;gbkey=Gene;gene=glnR;gene_biotype=protein_coding;locus_tag=SAG1764
NC_004116.1	RefSeq	CDS	1758911	1759282	.	-	0	ID=cds1719;Parent=gene1861;Dbxref=Genbank:NP_688754.1,GeneID:1014573;Name=NP_688754.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;gene=glnR;product=GlnR family transcriptional regulator;protein_id=NP_688754.1;transl_table=11
NC_004116.1	RefSeq	gene	1759362	1759901	.	-	.	ID=gene1862;Dbxref=GeneID:1014574;Name=SAG1765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1765
NC_004116.1	RefSeq	CDS	1759362	1759901	.	-	0	ID=cds1720;Parent=gene1862;Dbxref=Genbank:NP_688755.1,GeneID:1014574;Name=NP_688755.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688755.1;transl_table=11
NC_004116.1	RefSeq	gene	1760164	1761360	.	-	.	ID=gene1863;Dbxref=GeneID:1014575;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=SAG1766
NC_004116.1	RefSeq	CDS	1760164	1761360	.	-	0	ID=cds1721;Parent=gene1863;Dbxref=Genbank:NP_688756.1,GeneID:1014575;Name=NP_688756.1;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=NP_688756.1;transl_table=11
NC_004116.1	RefSeq	gene	1761495	1762364	.	-	.	ID=gene1864;Dbxref=GeneID:1014576;Name=SAG1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1767
NC_004116.1	RefSeq	CDS	1761495	1762364	.	-	0	ID=cds1722;Parent=gene1864;Dbxref=Genbank:NP_688757.1,GeneID:1014576;Name=NP_688757.1;Note=similar to GP:1944618%3B identified by sequence similarity;gbkey=CDS;product=acid phosphatase;protein_id=NP_688757.1;transl_table=11
NC_004116.1	RefSeq	gene	1762573	1763583	.	-	.	ID=gene1865;Dbxref=GeneID:1014577;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=SAG1768
NC_004116.1	RefSeq	CDS	1762573	1763583	.	-	0	ID=cds1723;Parent=gene1865;Dbxref=Genbank:NP_688758.1,GeneID:1014577;Name=NP_688758.1;Note=catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gap;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=NP_688758.1;transl_table=11
NC_004116.1	RefSeq	gene	1763787	1765865	.	-	.	ID=gene1866;Dbxref=GeneID:1014578;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SAG1769
NC_004116.1	RefSeq	CDS	1763787	1765865	.	-	0	ID=cds1724;Parent=gene1866;Dbxref=Genbank:NP_688759.1,GeneID:1014578;Name=NP_688759.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=NP_688759.1;transl_table=11
NC_004116.1	RefSeq	gene	1766020	1766490	.	-	.	ID=gene1867;Dbxref=GeneID:1014579;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=SAG1770
NC_004116.1	RefSeq	CDS	1766020	1766490	.	-	0	ID=cds1725;Parent=gene1867;Dbxref=Genbank:NP_688760.1,GeneID:1014579;Name=NP_688760.1;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;gbkey=CDS;gene=rpsG;product=30S ribosomal protein S7;protein_id=NP_688760.1;transl_table=11
NC_004116.1	RefSeq	gene	1766512	1766925	.	-	.	ID=gene1868;Dbxref=GeneID:1014580;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=SAG1771
NC_004116.1	RefSeq	CDS	1766512	1766925	.	-	0	ID=cds1726;Parent=gene1868;Dbxref=Genbank:NP_688761.1,GeneID:1014580;Name=NP_688761.1;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;gbkey=CDS;gene=rpsL;product=30S ribosomal protein S12;protein_id=NP_688761.1;transl_table=11
NC_004116.1	RefSeq	gene	1767144	1767956	.	-	.	ID=gene1869;Dbxref=GeneID:1014581;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=SAG1772
NC_004116.1	RefSeq	CDS	1767144	1767956	.	-	0	ID=cds1727;Parent=gene1869;Dbxref=Genbank:NP_688762.1,GeneID:1014581;Name=NP_688762.1;Note=identified by match to PFAM protein family HMM PF00156;gbkey=CDS;gene=purR;product=pur operon repressor;protein_id=NP_688762.1;transl_table=11
NC_004116.1	RefSeq	gene	1768053	1768994	.	-	.	ID=gene1870;Dbxref=GeneID:1014582;Name=SAG1773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1773
NC_004116.1	RefSeq	CDS	1768053	1768994	.	-	0	ID=cds1728;Parent=gene1870;Dbxref=Genbank:NP_688763.1,GeneID:1014582;Name=NP_688763.1;Note=identified by match to PFAM protein family HMM PF01966;gbkey=CDS;product=HD domain-containing protein;protein_id=NP_688763.1;transl_table=11
NC_004116.1	RefSeq	gene	1768984	1770258	.	-	.	ID=gene1871;Dbxref=GeneID:1014583;Name=SAG1774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1774
NC_004116.1	RefSeq	CDS	1768984	1770258	.	-	0	ID=cds1729;Parent=gene1871;Dbxref=Genbank:NP_688764.1,GeneID:1014583;Name=NP_688764.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688764.1;transl_table=11
NC_004116.1	RefSeq	gene	1770260	1770892	.	-	.	ID=gene1872;Dbxref=GeneID:1014584;Name=SAG1775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1775
NC_004116.1	RefSeq	CDS	1770260	1770892	.	-	0	ID=cds1730;Parent=gene1872;Dbxref=Genbank:NP_688765.1,GeneID:1014584;Name=NP_688765.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688765.1;transl_table=11
NC_004116.1	RefSeq	gene	1770885	1771547	.	-	.	ID=gene1873;Dbxref=GeneID:1014585;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=SAG1776
NC_004116.1	RefSeq	CDS	1770885	1771547	.	-	0	ID=cds1731;Parent=gene1873;Dbxref=Genbank:NP_688766.1,GeneID:1014585;Name=NP_688766.1;Note=catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=NP_688766.1;transl_table=11
NC_004116.1	RefSeq	gene	1771554	1772426	.	-	.	ID=gene1874;Dbxref=GeneID:1014586;Name=SAG1777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1777
NC_004116.1	RefSeq	CDS	1771554	1772426	.	-	0	ID=cds1732;Parent=gene1874;Dbxref=Genbank:NP_688767.1,GeneID:1014586;Name=NP_688767.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=ribosome-associated GTPase;protein_id=NP_688767.1;transl_table=11
NC_004116.1	RefSeq	gene	1772582	1773433	.	-	.	ID=gene1875;Dbxref=GeneID:1014587;Name=SAG1778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1778
NC_004116.1	RefSeq	CDS	1772582	1773433	.	-	0	ID=cds1733;Parent=gene1875;Dbxref=Genbank:NP_688768.1,GeneID:1014587;Name=NP_688768.1;Note=similar to GB:D28496 SP:P36999 PID:460699 GB:U00096 PID:1736466%3B identified by sequence similarity;gbkey=CDS;product=rRNA (guanine-N1-)-methyltransferase;protein_id=NP_688768.1;transl_table=11
NC_004116.1	RefSeq	gene	1773437	1774309	.	-	.	ID=gene1876;Dbxref=GeneID:1014588;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=SAG1779
NC_004116.1	RefSeq	CDS	1773437	1774309	.	-	0	ID=cds1734;Parent=gene1876;Dbxref=Genbank:NP_688769.1,GeneID:1014588;Name=NP_688769.1;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=NP_688769.1;transl_table=11
NC_004116.1	RefSeq	gene	1774389	1774880	.	-	.	ID=gene1877;Dbxref=GeneID:1014589;Name=SAG1780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1780
NC_004116.1	RefSeq	CDS	1774389	1774880	.	-	0	ID=cds1735;Parent=gene1877;Dbxref=Genbank:NP_688770.1,GeneID:1014589;Name=NP_688770.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688770.1;transl_table=11
NC_004116.1	RefSeq	gene	1774899	1775459	.	-	.	ID=gene1878;Dbxref=GeneID:1014590;Name=SAG1781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1781
NC_004116.1	RefSeq	CDS	1774899	1775459	.	-	0	ID=cds1736;Parent=gene1878;Dbxref=Genbank:NP_688771.1,GeneID:1014590;Name=NP_688771.1;Note=identified by match to PFAM protein family HMM PF01751;gbkey=CDS;product=primase-like protein;protein_id=NP_688771.1;transl_table=11
NC_004116.1	RefSeq	gene	1775446	1776228	.	-	.	ID=gene1879;Dbxref=GeneID:1014591;Name=SAG1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1782
NC_004116.1	RefSeq	CDS	1775446	1776228	.	-	0	ID=cds1737;Parent=gene1879;Dbxref=Genbank:NP_688772.1,GeneID:1014591;Name=NP_688772.1;Note=identified by match to PFAM protein family HMM PF01026;gbkey=CDS;product=TatD family deoxyribonuclease;protein_id=NP_688772.1;transl_table=11
NC_004116.1	RefSeq	gene	1776410	1776682	.	-	.	ID=gene1880;Dbxref=GeneID:1014592;Name=SAG1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1783
NC_004116.1	RefSeq	CDS	1776410	1776682	.	-	0	ID=cds1738;Parent=gene1880;Dbxref=Genbank:NP_688773.1,GeneID:1014592;Name=NP_688773.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688773.1;transl_table=11
NC_004116.1	RefSeq	gene	1776701	1777093	.	-	.	ID=gene1881;Dbxref=GeneID:1014593;Name=SAG1784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1784
NC_004116.1	RefSeq	CDS	1776701	1777093	.	-	0	ID=cds1739;Parent=gene1881;Dbxref=Genbank:NP_688774.1,GeneID:1014593;Name=NP_688774.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688774.1;transl_table=11
NC_004116.1	RefSeq	gene	1777084	1778376	.	-	.	ID=gene1882;Dbxref=GeneID:1014594;Name=SAG1785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1785
NC_004116.1	RefSeq	CDS	1777084	1778376	.	-	0	ID=cds1740;Parent=gene1882;Dbxref=Genbank:NP_688775.1,GeneID:1014594;Name=NP_688775.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688775.1;transl_table=11
NC_004116.1	RefSeq	gene	1778376	1778768	.	-	.	ID=gene1883;Dbxref=GeneID:1014595;Name=SAG1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1786
NC_004116.1	RefSeq	CDS	1778376	1778768	.	-	0	ID=cds1741;Parent=gene1883;Dbxref=Genbank:NP_688776.1,GeneID:1014595;Name=NP_688776.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688776.1;transl_table=11
NC_004116.1	RefSeq	gene	1778943	1780205	.	-	.	ID=gene1884;Dbxref=GeneID:1014596;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=SAG1787
NC_004116.1	RefSeq	CDS	1778943	1780205	.	-	0	ID=cds1742;Parent=gene1884;Dbxref=Genbank:NP_688777.1,GeneID:1014596;Name=NP_688777.1;Note=similar to OMNI:SP2173%3B identified by sequence similarity;gbkey=CDS;gene=dltD;product=dltD protein;protein_id=NP_688777.1;transl_table=11
NC_004116.1	RefSeq	gene	1780198	1780437	.	-	.	ID=gene1885;Dbxref=GeneID:1014597;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=SAG1788
NC_004116.1	RefSeq	CDS	1780198	1780437	.	-	0	ID=cds1743;Parent=gene1885;Dbxref=Genbank:NP_688778.1,GeneID:1014597;Name=NP_688778.1;Note=D-alanyl carrier protein subunit%3B involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid%3B D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid;gbkey=CDS;gene=dltC;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=NP_688778.1;transl_table=11
NC_004116.1	RefSeq	gene	1780452	1781717	.	-	.	ID=gene1886;Dbxref=GeneID:1014598;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=SAG1789
NC_004116.1	RefSeq	CDS	1780452	1781717	.	-	0	ID=cds1744;Parent=gene1886;Dbxref=Genbank:NP_688779.1,GeneID:1014598;Name=NP_688779.1;Note=similar to OMNI:SP2175%3B identified by sequence similarity;gbkey=CDS;gene=dltB;product=dltB protein;protein_id=NP_688779.1;transl_table=11
NC_004116.1	RefSeq	gene	1781714	1783249	.	-	.	ID=gene1887;Dbxref=GeneID:1014599;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=SAG1790
NC_004116.1	RefSeq	CDS	1781714	1783249	.	-	0	ID=cds1745;Parent=gene1887;Dbxref=Genbank:NP_688780.1,GeneID:1014599;Name=NP_688780.1;Note=transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid;gbkey=CDS;gene=dltA;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=NP_688780.1;transl_table=11
NC_004116.1	RefSeq	gene	1783395	1784582	.	-	.	ID=gene1888;Dbxref=GeneID:1014600;Name=SAG1791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1791
NC_004116.1	RefSeq	CDS	1783395	1784582	.	-	0	ID=cds1746;Parent=gene1888;Dbxref=Genbank:NP_688781.1,GeneID:1014600;Name=NP_688781.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_688781.1;transl_table=11
NC_004116.1	RefSeq	gene	1784582	1785256	.	-	.	ID=gene1889;Dbxref=GeneID:1014601;Name=SAG1792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1792
NC_004116.1	RefSeq	CDS	1784582	1785256	.	-	0	ID=cds1747;Parent=gene1889;Dbxref=Genbank:NP_688782.1,GeneID:1014601;Name=NP_688782.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_688782.1;transl_table=11
NC_004116.1	RefSeq	gene	1785612	1785746	.	-	.	ID=gene1890;Dbxref=GeneID:1014602;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SAG1793
NC_004116.1	RefSeq	CDS	1785612	1785746	.	-	0	ID=cds1748;Parent=gene1890;Dbxref=Genbank:NP_688783.1,GeneID:1014602;Name=NP_688783.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=NP_688783.1;transl_table=11
NC_004116.1	RefSeq	gene	1785930	1787285	.	-	.	ID=gene1891;Dbxref=GeneID:1014603;Name=SAG1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1794
NC_004116.1	RefSeq	CDS	1785930	1787285	.	-	0	ID=cds1749;Parent=gene1891;Dbxref=Genbank:NP_688784.1,GeneID:1014603;Name=NP_688784.1;Note=similar to OMNI:NTL01BH3953%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688784.1;transl_table=11
NC_004116.1	RefSeq	gene	1787517	1788683	.	+	.	ID=gene1892;Dbxref=GeneID:1014604;Name=SAG1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1795
NC_004116.1	RefSeq	CDS	1787517	1788683	.	+	0	ID=cds1750;Parent=gene1892;Dbxref=Genbank:NP_688785.1,GeneID:1014604;Name=NP_688785.1;Note=identified by match to PFAM protein family HMM PF00665;gbkey=CDS;product=IS30 family transposase;protein_id=NP_688785.1;transl_table=11
NC_004116.1	RefSeq	gene	1789082	1790809	.	-	.	ID=gene1893;Dbxref=GeneID:1014605;Name=SAG1796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1796
NC_004116.1	RefSeq	CDS	1789082	1790809	.	-	0	ID=cds1751;Parent=gene1893;Dbxref=Genbank:NP_688786.1,GeneID:1014605;Name=NP_688786.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=NP_688786.1;transl_table=11
NC_004116.1	RefSeq	gene	1790828	1792051	.	-	.	ID=gene1894;Dbxref=GeneID:1014606;Name=SAG1797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1797
NC_004116.1	RefSeq	CDS	1790828	1792051	.	-	0	ID=cds1752;Parent=gene1894;Dbxref=Genbank:NP_688787.1,GeneID:1014606;Name=NP_688787.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_688787.1;transl_table=11
NC_004116.1	RefSeq	gene	1792194	1792313	.	+	.	ID=gene1895;Dbxref=GeneID:1014607;Name=SAG1798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1798
NC_004116.1	RefSeq	CDS	1792194	1792313	.	+	0	ID=cds1753;Parent=gene1895;Dbxref=Genbank:NP_688788.1,GeneID:1014607;Name=NP_688788.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688788.1;transl_table=11
NC_004116.1	RefSeq	gene	1792428	1794806	.	-	.	ID=gene1896;Dbxref=GeneID:1014608;Name=xfp;gbkey=Gene;gene=xfp;gene_biotype=protein_coding;locus_tag=SAG1799
NC_004116.1	RefSeq	CDS	1792428	1794806	.	-	0	ID=cds1754;Parent=gene1896;Dbxref=Genbank:NP_688789.1,GeneID:1014608;Name=NP_688789.1;Note=similar to SP:Q9AEM9%3B identified by sequence similarity;gbkey=CDS;gene=xfp;product=phosphoketolase;protein_id=NP_688789.1;transl_table=11
NC_004116.1	RefSeq	gene	1794896	1795987	.	-	.	ID=gene1897;Dbxref=GeneID:1014609;Name=SAG1800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1800
NC_004116.1	RefSeq	CDS	1794896	1795987	.	-	0	ID=cds1755;Parent=gene1897;Dbxref=Genbank:NP_688790.1,GeneID:1014609;Name=NP_688790.1;gbkey=CDS;product=L-ascorbate 6-phosphate lactonase;protein_id=NP_688790.1;transl_table=11
NC_004116.1	RefSeq	gene	1796304	1797983	.	-	.	ID=gene1898;Dbxref=GeneID:1014610;Name=SAG1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1801
NC_004116.1	RefSeq	CDS	1796304	1797983	.	-	0	ID=cds1756;Parent=gene1898;Dbxref=Genbank:NP_688791.1,GeneID:1014610;Name=NP_688791.1;Note=identified by match to PFAM protein family HMM PF00874;gbkey=CDS;product=BglG family transcriptional antiterminator;protein_id=NP_688791.1;transl_table=11
NC_004116.1	RefSeq	gene	1798049	1798810	.	-	.	ID=gene1899;Dbxref=GeneID:1014611;Name=SAG1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1802
NC_004116.1	RefSeq	CDS	1798049	1798810	.	-	0	ID=cds1757;Parent=gene1899;Dbxref=Genbank:NP_688792.1,GeneID:1014611;Name=NP_688792.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688792.1;transl_table=11
NC_004116.1	RefSeq	gene	1798830	1800347	.	-	.	ID=gene1900;Dbxref=GeneID:1014612;Name=SAG1803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1803
NC_004116.1	RefSeq	CDS	1798830	1800347	.	-	0	ID=cds1758;Parent=gene1900;Dbxref=Genbank:NP_688793.1,GeneID:1014612;Name=NP_688793.1;Note=identified by match to PFAM protein family HMM PF00370;gbkey=CDS;product=carbohydrate kinase;protein_id=NP_688793.1;transl_table=11
NC_004116.1	RefSeq	gene	1800413	1801402	.	-	.	ID=gene1901;Dbxref=GeneID:1014613;Name=SAG1804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1804
NC_004116.1	RefSeq	CDS	1800413	1801402	.	-	0	ID=cds1759;Parent=gene1901;Dbxref=Genbank:NP_688794.1,GeneID:1014613;Name=NP_688794.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688794.1;transl_table=11
NC_004116.1	RefSeq	gene	1801424	1802875	.	-	.	ID=gene1902;Dbxref=GeneID:1014614;Name=SAG1805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1805
NC_004116.1	RefSeq	CDS	1801424	1802875	.	-	0	ID=cds1760;Parent=gene1902;Dbxref=Genbank:NP_688795.1,GeneID:1014614;Name=NP_688795.1;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=NP_688795.1;transl_table=11
NC_004116.1	RefSeq	gene	1802973	1803929	.	-	.	ID=gene1903;Dbxref=GeneID:1014615;Name=SAG1806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1806
NC_004116.1	RefSeq	CDS	1802973	1803929	.	-	0	ID=cds1761;Parent=gene1903;Dbxref=Genbank:NP_688796.1,GeneID:1014615;Name=NP_688796.1;Note=identified by match to PFAM protein family HMM PF00389;gbkey=CDS;product=glyoxylate reductase%2C NADH-dependent;protein_id=NP_688796.1;transl_table=11
NC_004116.1	RefSeq	gene	1803948	1804967	.	-	.	ID=gene1904;Dbxref=GeneID:1014616;Name=SAG1807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1807
NC_004116.1	RefSeq	CDS	1803948	1804967	.	-	0	ID=cds1762;Parent=gene1904;Dbxref=Genbank:NP_688797.1,GeneID:1014616;Name=NP_688797.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688797.1;transl_table=11
NC_004116.1	RefSeq	gene	1805202	1806185	.	-	.	ID=gene1905;Dbxref=GeneID:1014617;Name=SAG1808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1808
NC_004116.1	RefSeq	CDS	1805202	1806185	.	-	0	ID=cds1763;Parent=gene1905;Dbxref=Genbank:NP_688798.1,GeneID:1014617;Name=NP_688798.1;Note=identified by match to PFAM protein family HMM PF00356;gbkey=CDS;product=LacI family sugar-binding transcriptional regulator;protein_id=NP_688798.1;transl_table=11
NC_004116.1	RefSeq	gene	1806349	1806996	.	-	.	ID=gene1906;Dbxref=GeneID:1014618;Name=SAG1809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1809
NC_004116.1	RefSeq	CDS	1806349	1806996	.	-	0	ID=cds1764;Parent=gene1906;Dbxref=Genbank:NP_688799.1,GeneID:1014618;Name=NP_688799.1;Note=similar to novel fructose-6-phosphate aldolase from Escherichia coli%3B enzyme from Methanocaldococcus janaschii shows transaldolase activity;gbkey=CDS;product=translaldolase;protein_id=NP_688799.1;transl_table=11
NC_004116.1	RefSeq	gene	1807007	1807723	.	-	.	ID=gene1907;Dbxref=GeneID:1014619;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SAG1810
NC_004116.1	RefSeq	CDS	1807007	1807723	.	-	0	ID=cds1765;Parent=gene1907;Dbxref=Genbank:NP_688800.1,GeneID:1014619;Name=NP_688800.1;Note=catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate in the L-arabinose and L-ascorbate degradation pathways;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=NP_688800.1;transl_table=11
NC_004116.1	RefSeq	gene	1807725	1808588	.	-	.	ID=gene1908;Dbxref=GeneID:1014620;Name=SAG1811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1811
NC_004116.1	RefSeq	CDS	1807725	1808588	.	-	0	ID=cds1766;Parent=gene1908;Dbxref=Genbank:NP_688801.1,GeneID:1014620;Name=NP_688801.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=NP_688801.1;transl_table=11
NC_004116.1	RefSeq	gene	1808592	1809257	.	-	.	ID=gene1909;Dbxref=GeneID:1014621;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=SAG1812
NC_004116.1	RefSeq	CDS	1808592	1809257	.	-	0	ID=cds1767;Parent=gene1909;Dbxref=Genbank:NP_688802.1,GeneID:1014621;Name=NP_688802.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;gbkey=CDS;gene=ulaD;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=NP_688802.1;transl_table=11
NC_004116.1	RefSeq	gene	1809370	1809855	.	-	.	ID=gene1910;Dbxref=GeneID:1014622;Name=SAG1813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1813
NC_004116.1	RefSeq	CDS	1809370	1809855	.	-	0	ID=cds1768;Parent=gene1910;Dbxref=Genbank:NP_688803.1,GeneID:1014622;Name=NP_688803.1;Note=identified by match to PFAM protein family HMM PF00359;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=NP_688803.1;transl_table=11
NC_004116.1	RefSeq	gene	1809922	1810200	.	-	.	ID=gene1911;Dbxref=GeneID:1014623;Name=SAG1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1814
NC_004116.1	RefSeq	CDS	1809922	1810200	.	-	0	ID=cds1769;Parent=gene1911;Dbxref=Genbank:NP_688804.1,GeneID:1014623;Name=NP_688804.1;Note=similar to OMNI:SP2037%3B identified by sequence similarity;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=NP_688804.1;transl_table=11
NC_004116.1	RefSeq	gene	1810228	1811667	.	-	.	ID=gene1912;Dbxref=GeneID:1014624;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=SAG1815
NC_004116.1	RefSeq	CDS	1810228	1811667	.	-	0	ID=cds1770;Parent=gene1912;Dbxref=Genbank:NP_688805.1,GeneID:1014624;Name=NP_688805.1;Note=membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;gbkey=CDS;gene=ulaA;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=NP_688805.1;transl_table=11
NC_004116.1	RefSeq	gene	1811835	1812452	.	-	.	ID=gene1913;Dbxref=GeneID:1014625;Name=SAG1816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1816
NC_004116.1	RefSeq	CDS	1811835	1812452	.	-	0	ID=cds1771;Parent=gene1913;Dbxref=Genbank:NP_688806.1,GeneID:1014625;Name=NP_688806.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688806.1;transl_table=11
NC_004116.1	RefSeq	gene	1812611	1813084	.	+	.	ID=gene1914;Dbxref=GeneID:1014626;Name=SAG1817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1817
NC_004116.1	RefSeq	CDS	1812611	1813084	.	+	0	ID=cds1772;Parent=gene1914;Dbxref=Genbank:NP_688807.1,GeneID:1014626;Name=NP_688807.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688807.1;transl_table=11
NC_004116.1	RefSeq	gene	1813107	1814399	.	-	.	ID=gene1915;Dbxref=GeneID:1014627;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=SAG1818
NC_004116.1	RefSeq	CDS	1813107	1814399	.	-	0	ID=cds1773;Parent=gene1915;Dbxref=Genbank:NP_688808.1,GeneID:1014627;Name=NP_688808.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=NP_688808.1;transl_table=11
NC_004116.1	RefSeq	gene	1814769	1815791	.	-	.	ID=gene1916;Dbxref=GeneID:1014628;Name=pfoR;gbkey=Gene;gene=pfoR;gene_biotype=protein_coding;locus_tag=SAG1819
NC_004116.1	RefSeq	CDS	1814769	1815791	.	-	0	ID=cds1774;Parent=gene1916;Dbxref=Genbank:NP_688809.1,GeneID:1014628;Name=NP_688809.1;Note=identified by sequence similarity;gbkey=CDS;gene=pfoR;product=perfringolysin O regulator protein;protein_id=NP_688809.1;transl_table=11
NC_004116.1	RefSeq	gene	1816153	1816827	.	+	.	ID=gene1917;Dbxref=GeneID:1014629;Name=SAG1820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1820
NC_004116.1	RefSeq	CDS	1816153	1816827	.	+	0	ID=cds1775;Parent=gene1917;Dbxref=Genbank:NP_688810.1,GeneID:1014629;Name=NP_688810.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688810.1;transl_table=11
NC_004116.1	RefSeq	gene	1816997	1819249	.	+	.	ID=gene1918;Dbxref=GeneID:1014630;Name=SAG1821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1821
NC_004116.1	RefSeq	CDS	1816997	1819249	.	+	0	ID=cds1776;Parent=gene1918;Dbxref=Genbank:NP_688811.1,GeneID:1014630;Name=NP_688811.1;Note=Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine;gbkey=CDS;product=bifunctional glutamate--cysteine ligase/glutathione synthetase;protein_id=NP_688811.1;transl_table=11
NC_004116.1	RefSeq	gene	1819373	1820191	.	+	.	ID=gene1919;Dbxref=GeneID:1014631;Name=SAG1822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1822
NC_004116.1	RefSeq	CDS	1819373	1820191	.	+	0	ID=cds1777;Parent=gene1919;Dbxref=Genbank:NP_688812.1,GeneID:1014631;Name=NP_688812.1;Note=similar to OMNI:NTL01SPL0121%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688812.1;transl_table=11
NC_004116.1	RefSeq	gene	1820188	1821444	.	+	.	ID=gene1920;Dbxref=GeneID:1014632;Name=SAG1823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1823
NC_004116.1	RefSeq	CDS	1820188	1821444	.	+	0	ID=cds1778;Parent=gene1920;Dbxref=Genbank:NP_688813.1,GeneID:1014632;Name=NP_688813.1;Note=similar to OMNI:NTL01SPL0120%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688813.1;transl_table=11
NC_004116.1	RefSeq	gene	1821584	1822459	.	+	.	ID=gene1921;Dbxref=GeneID:1014633;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SAG1824
NC_004116.1	RefSeq	CDS	1821584	1822459	.	+	0	ID=cds1779;Parent=gene1921;Dbxref=Genbank:NP_688814.1,GeneID:1014633;Name=NP_688814.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=heat shock protein 33;protein_id=NP_688814.1;transl_table=11
NC_004116.1	RefSeq	gene	1822443	1823420	.	+	.	ID=gene1922;Dbxref=GeneID:1014634;Name=SAG1825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1825
NC_004116.1	RefSeq	CDS	1822443	1823420	.	+	0	ID=cds1780;Parent=gene1922;Dbxref=Genbank:NP_688815.1,GeneID:1014634;Name=NP_688815.1;Note=identified by match to PFAM protein family HMM PF01207;gbkey=CDS;product=NifR3/Smm1 family protein;protein_id=NP_688815.1;transl_table=11
NC_004116.1	RefSeq	gene	1823541	1824182	.	+	.	ID=gene1923;Dbxref=GeneID:1014635;Name=SAG1826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1826
NC_004116.1	RefSeq	CDS	1823541	1824182	.	+	0	ID=cds1781;Parent=gene1923;Dbxref=Genbank:NP_688816.1,GeneID:1014635;Name=NP_688816.1;Note=identified by match to PFAM protein family HMM PF01712;gbkey=CDS;product=deoxynucleoside kinase family protein;protein_id=NP_688816.1;transl_table=11
NC_004116.1	RefSeq	gene	1824196	1824687	.	+	.	ID=gene1924;Dbxref=GeneID:1014636;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=SAG1827
NC_004116.1	RefSeq	CDS	1824196	1824687	.	+	0	ID=cds1782;Parent=gene1924;Dbxref=Genbank:NP_688817.1,GeneID:1014636;Name=NP_688817.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;gene=pat;product=phosphinothricin N-acetyltransferase;protein_id=NP_688817.1;transl_table=11
NC_004116.1	RefSeq	gene	1824907	1827354	.	-	.	ID=gene1925;Dbxref=GeneID:1014637;Name=SAG1828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1828
NC_004116.1	RefSeq	CDS	1824907	1827354	.	-	0	ID=cds1783;Parent=gene1925;Dbxref=Genbank:NP_688818.1,GeneID:1014637;Name=NP_688818.1;Note=identified by match to PFAM protein family HMM PF00004;gbkey=CDS;product=ATP-dependent Clp protease%2C ATP-binding subunit;protein_id=NP_688818.1;transl_table=11
NC_004116.1	RefSeq	gene	1827351	1827815	.	-	.	ID=gene1926;Dbxref=GeneID:1014638;Name=ctsR;gbkey=Gene;gene=ctsR;gene_biotype=protein_coding;locus_tag=SAG1829
NC_004116.1	RefSeq	CDS	1827351	1827815	.	-	0	ID=cds1784;Parent=gene1926;Dbxref=Genbank:NP_688819.1,GeneID:1014638;Name=NP_688819.1;Note=similar to GB:D26185 SP:P37568 PID:467471 GB:AL009126%3B identified by sequence similarity;gbkey=CDS;gene=ctsR;product=CtsR family transcriptional regulator;protein_id=NP_688819.1;transl_table=11
NC_004116.1	RefSeq	gene	1827988	1828449	.	+	.	ID=gene1927;Dbxref=GeneID:1014639;Name=SAG1830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1830
NC_004116.1	RefSeq	CDS	1827988	1828449	.	+	0	ID=cds1785;Parent=gene1927;Dbxref=Genbank:NP_688820.1,GeneID:1014639;Name=NP_688820.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688820.1;transl_table=11
NC_004116.1	RefSeq	gene	1828608	1829648	.	-	.	ID=gene1928;Dbxref=GeneID:1014640;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SAG1831
NC_004116.1	RefSeq	CDS	1828608	1829648	.	-	0	ID=cds1786;Parent=gene1928;Dbxref=Genbank:NP_688821.1,GeneID:1014640;Name=NP_688821.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=NP_688821.1;transl_table=11
NC_004116.1	RefSeq	gene	1829742	1830512	.	-	.	ID=gene1929;Dbxref=GeneID:1014641;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=SAG1832
NC_004116.1	RefSeq	CDS	1829742	1830512	.	-	0	ID=cds1787;Parent=gene1929;Dbxref=Genbank:NP_688822.1,GeneID:1014641;Name=NP_688822.1;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=NP_688822.1;transl_table=11
NC_004116.1	RefSeq	gene	1830789	1831349	.	+	.	ID=gene1930;Dbxref=GeneID:1014642;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=SAG1833
NC_004116.1	RefSeq	CDS	1830789	1831349	.	+	0	ID=cds1788;Parent=gene1930;Dbxref=Genbank:NP_688823.1,GeneID:1014642;Name=NP_688823.1;Note=identified by match to PFAM protein family HMM PF00578;gbkey=CDS;gene=ahpC;product=alkyl hydroperoxide reductase;protein_id=NP_688823.1;transl_table=11
NC_004116.1	RefSeq	gene	1831367	1832899	.	+	.	ID=gene1931;Dbxref=GeneID:1014643;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=SAG1834
NC_004116.1	RefSeq	CDS	1831367	1832899	.	+	0	ID=cds1789;Parent=gene1931;Dbxref=Genbank:NP_688824.1,GeneID:1014643;Name=NP_688824.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;gene=ahpF;product=alkyl hydroperoxide reductase;protein_id=NP_688824.1;transl_table=11
NC_004116.1	RefSeq	gene	1833034	1833104	.	+	.	ID=gene1932;Dbxref=GeneID:1014644;Name=tRNA-Cys-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Cys-1
NC_004116.1	RefSeq	tRNA	1833034	1833104	.	+	.	ID=rna96;Parent=gene1932;Dbxref=GeneID:1014644;gbkey=tRNA;product=tRNA-Cys
NC_004116.1	RefSeq	exon	1833034	1833104	.	+	.	ID=id98;Parent=rna96;Dbxref=GeneID:1014644;gbkey=tRNA;product=tRNA-Cys
NC_004116.1	RefSeq	region	1833201	1867137	.	+	.	ID=id99;Note=lysogenic prophage LambdaSa2 region%3B nonfunctional prophage;gbkey=misc_feature
NC_004116.1	RefSeq	gene	1833318	1833722	.	-	.	ID=gene1933;Dbxref=GeneID:1014645;Name=SAG1835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1835
NC_004116.1	RefSeq	CDS	1833318	1833722	.	-	0	ID=cds1790;Parent=gene1933;Dbxref=Genbank:NP_688825.1,GeneID:1014645;Name=NP_688825.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688825.1;transl_table=11
NC_004116.1	RefSeq	gene	1833783	1833968	.	-	.	ID=gene1934;Dbxref=GeneID:1014646;Name=SAG1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1836
NC_004116.1	RefSeq	CDS	1833783	1833968	.	-	0	ID=cds1791;Parent=gene1934;Dbxref=Genbank:NP_688826.1,GeneID:1014646;Name=NP_688826.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688826.1;transl_table=11
NC_004116.1	RefSeq	gene	1834175	1835581	.	-	.	ID=gene1935;Dbxref=GeneID:1014647;Name=SAG1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1837
NC_004116.1	RefSeq	CDS	1834175	1835581	.	-	0	ID=cds1792;Parent=gene1935;Dbxref=Genbank:NP_688827.1,GeneID:1014647;Name=NP_688827.1;Note=identified by match to PFAM protein family HMM PF01832;gbkey=CDS;product=prophage LambdaSa2%2C lysin;protein_id=NP_688827.1;transl_table=11
NC_004116.1	RefSeq	gene	1835585	1835914	.	-	.	ID=gene1936;Dbxref=GeneID:1014648;Name=SAG1838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1838
NC_004116.1	RefSeq	CDS	1835585	1835914	.	-	0	ID=cds1793;Parent=gene1936;Dbxref=Genbank:NP_688828.1,GeneID:1014648;Name=NP_688828.1;Note=similar to GP:13655626%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa2%2C holin;protein_id=NP_688828.1;transl_table=11
NC_004116.1	RefSeq	gene	1835917	1836327	.	-	.	ID=gene1937;Dbxref=GeneID:1014649;Name=SAG1839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1839
NC_004116.1	RefSeq	CDS	1835917	1836327	.	-	0	ID=cds1794;Parent=gene1937;Dbxref=Genbank:NP_688829.1,GeneID:1014649;Name=NP_688829.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688829.1;transl_table=11
NC_004116.1	RefSeq	gene	1836362	1836700	.	-	.	ID=gene1938;Dbxref=GeneID:1014650;Name=SAG1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1840
NC_004116.1	RefSeq	CDS	1836362	1836700	.	-	0	ID=cds1795;Parent=gene1938;Dbxref=Genbank:NP_688830.1,GeneID:1014650;Name=NP_688830.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688830.1;transl_table=11
NC_004116.1	RefSeq	gene	1836703	1836933	.	-	.	ID=gene1939;Dbxref=GeneID:1014651;Name=SAG1841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1841
NC_004116.1	RefSeq	CDS	1836703	1836933	.	-	0	ID=cds1796;Parent=gene1939;Dbxref=Genbank:NP_688831.1,GeneID:1014651;Name=NP_688831.1;Note=similar to PID:1514671%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688831.1;transl_table=11
NC_004116.1	RefSeq	gene	1836950	1840624	.	-	.	ID=gene1940;Dbxref=GeneID:1014652;Name=SAG1842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1842
NC_004116.1	RefSeq	CDS	1836950	1840624	.	-	0	ID=cds1797;Parent=gene1940;Dbxref=Genbank:NP_688832.1,GeneID:1014652;Name=NP_688832.1;Note=similar to GP:10732859%3B identified by sequence similarity%3B PblB is a platelet adhesin. This version contains a 200aa insert that shows similarity (32%25 identity%2C 44%25 similarity over 95 residues) to SP|Q9TL08 a chloroplast enzyme which converts protoporphyrin IX (a hemoglobin precursor) into cholorophyll.;gbkey=CDS;product=prophage LambdaSa2%2C PblB;protein_id=NP_688832.1;transl_table=11
NC_004116.1	RefSeq	gene	1840625	1841347	.	-	.	ID=gene1941;Dbxref=GeneID:1014653;Name=SAG1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1843
NC_004116.1	RefSeq	CDS	1840625	1841347	.	-	0	ID=cds1798;Parent=gene1941;Dbxref=Genbank:NP_688833.1,GeneID:1014653;Name=NP_688833.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688833.1;transl_table=11
NC_004116.1	RefSeq	gene	1841344	1844079	.	-	.	ID=gene1942;Dbxref=GeneID:1014654;Name=SAG1844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1844
NC_004116.1	RefSeq	CDS	1841344	1844079	.	-	0	ID=cds1799;Parent=gene1942;Dbxref=Genbank:NP_688834.1,GeneID:1014654;Name=NP_688834.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688834.1;transl_table=11
NC_004116.1	RefSeq	gene	1844098	1844226	.	-	.	ID=gene1943;Dbxref=GeneID:1014655;Name=SAG1845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1845
NC_004116.1	RefSeq	CDS	1844098	1844226	.	-	0	ID=cds1800;Parent=gene1943;Dbxref=Genbank:NP_688835.1,GeneID:1014655;Name=NP_688835.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688835.1;transl_table=11
NC_004116.1	RefSeq	gene	1844265	1844741	.	-	.	ID=gene1944;Dbxref=GeneID:1014656;Name=SAG1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1846
NC_004116.1	RefSeq	CDS	1844265	1844741	.	-	0	ID=cds1801;Parent=gene1944;Dbxref=Genbank:NP_688836.1,GeneID:1014656;Name=NP_688836.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688836.1;transl_table=11
NC_004116.1	RefSeq	gene	1844741	1845424	.	-	.	ID=gene1945;Dbxref=GeneID:1014657;Name=SAG1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1847
NC_004116.1	RefSeq	CDS	1844741	1845424	.	-	0	ID=cds1802;Parent=gene1945;Dbxref=Genbank:NP_688837.1,GeneID:1014657;Name=NP_688837.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688837.1;transl_table=11
NC_004116.1	RefSeq	gene	1845439	1845783	.	-	.	ID=gene1946;Dbxref=GeneID:1014658;Name=SAG1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1848
NC_004116.1	RefSeq	CDS	1845439	1845783	.	-	0	ID=cds1803;Parent=gene1946;Dbxref=Genbank:NP_688838.1,GeneID:1014658;Name=NP_688838.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688838.1;transl_table=11
NC_004116.1	RefSeq	gene	1845770	1846117	.	-	.	ID=gene1947;Dbxref=GeneID:1014659;Name=SAG1849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1849
NC_004116.1	RefSeq	CDS	1845770	1846117	.	-	0	ID=cds1804;Parent=gene1947;Dbxref=Genbank:NP_688839.1,GeneID:1014659;Name=NP_688839.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688839.1;transl_table=11
NC_004116.1	RefSeq	gene	1846117	1846422	.	-	.	ID=gene1948;Dbxref=GeneID:1014660;Name=SAG1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1850
NC_004116.1	RefSeq	CDS	1846117	1846422	.	-	0	ID=cds1805;Parent=gene1948;Dbxref=Genbank:NP_688840.1,GeneID:1014660;Name=NP_688840.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688840.1;transl_table=11
NC_004116.1	RefSeq	gene	1846419	1846754	.	-	.	ID=gene1949;Dbxref=GeneID:1014661;Name=SAG1851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1851
NC_004116.1	RefSeq	CDS	1846419	1846754	.	-	0	ID=cds1806;Parent=gene1949;Dbxref=Genbank:NP_688841.1,GeneID:1014661;Name=NP_688841.1;Note=similar to GB:AE001825%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688841.1;transl_table=11
NC_004116.1	RefSeq	gene	1846775	1848037	.	-	.	ID=gene1950;Dbxref=GeneID:1014662;Name=SAG1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1852
NC_004116.1	RefSeq	CDS	1846775	1848037	.	-	0	ID=cds1807;Parent=gene1950;Dbxref=Genbank:NP_688842.1,GeneID:1014662;Name=NP_688842.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688842.1;transl_table=11
NC_004116.1	RefSeq	gene	1848048	1848590	.	-	.	ID=gene1951;Dbxref=GeneID:1014663;Name=SAG1853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1853
NC_004116.1	RefSeq	CDS	1848048	1848590	.	-	0	ID=cds1808;Parent=gene1951;Dbxref=Genbank:NP_688843.1,GeneID:1014663;Name=NP_688843.1;Note=similar to OMNI:CC2786%3B identified by sequence similarity;gbkey=CDS;product=prophage LambdaSa2%2C protease;protein_id=NP_688843.1;transl_table=11
NC_004116.1	RefSeq	gene	1848640	1849782	.	-	.	ID=gene1952;Dbxref=GeneID:1014664;Name=SAG1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1854
NC_004116.1	RefSeq	CDS	1848640	1849782	.	-	0	ID=cds1809;Parent=gene1952;Dbxref=Genbank:NP_688844.1,GeneID:1014664;Name=NP_688844.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688844.1;transl_table=11
NC_004116.1	RefSeq	gene	1849791	1851503	.	-	.	ID=gene1953;Dbxref=GeneID:1014665;Name=SAG1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1855
NC_004116.1	RefSeq	CDS	1849791	1851503	.	-	0	ID=cds1810;Parent=gene1953;Dbxref=Genbank:NP_688845.1,GeneID:1014665;Name=NP_688845.1;Note=identified by match to PFAM protein family HMM PF03354;gbkey=CDS;product=prophage LambdaSa2%2C terminase large subunit;protein_id=NP_688845.1;transl_table=11
NC_004116.1	RefSeq	gene	1851496	1851981	.	-	.	ID=gene1954;Dbxref=GeneID:1014666;Name=SAG1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1856
NC_004116.1	RefSeq	CDS	1851496	1851981	.	-	0	ID=cds1811;Parent=gene1954;Dbxref=Genbank:NP_688846.1,GeneID:1014666;Name=NP_688846.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688846.1;transl_table=11
NC_004116.1	RefSeq	gene	1852069	1852428	.	-	.	ID=gene1955;Dbxref=GeneID:1014667;Name=SAG1857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1857
NC_004116.1	RefSeq	CDS	1852069	1852428	.	-	0	ID=cds1812;Parent=gene1955;Dbxref=Genbank:NP_688847.1,GeneID:1014667;Name=NP_688847.1;Note=identified by match to PFAM protein family HMM PF01844;gbkey=CDS;product=prophage LambdaSa2%2C HNH endonuclease family protein;protein_id=NP_688847.1;transl_table=11
NC_004116.1	RefSeq	gene	1852428	1852715	.	-	.	ID=gene1956;Dbxref=GeneID:1014668;Name=SAG1858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1858
NC_004116.1	RefSeq	CDS	1852428	1852715	.	-	0	ID=cds1813;Parent=gene1956;Dbxref=Genbank:NP_688848.1,GeneID:1014668;Name=NP_688848.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688848.1;transl_table=11
NC_004116.1	RefSeq	gene	1853005	1853547	.	-	.	ID=gene1957;Dbxref=GeneID:1014669;Name=SAG1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1859
NC_004116.1	RefSeq	CDS	1853005	1853547	.	-	0	ID=cds1814;Parent=gene1957;Dbxref=Genbank:NP_688849.1,GeneID:1014669;Name=NP_688849.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=prophage LambdaSa2%2C site-specific recombinase phage integrase family protein;protein_id=NP_688849.1;transl_table=11
NC_004116.1	RefSeq	gene	1853657	1854121	.	-	.	ID=gene1958;Dbxref=GeneID:1014670;Name=SAG1860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1860
NC_004116.1	RefSeq	CDS	1853657	1854121	.	-	0	ID=cds1815;Parent=gene1958;Dbxref=Genbank:NP_688850.1,GeneID:1014670;Name=NP_688850.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688850.1;transl_table=11
NC_004116.1	RefSeq	gene	1854118	1854477	.	-	.	ID=gene1959;Dbxref=GeneID:1014671;Name=SAG1861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1861
NC_004116.1	RefSeq	CDS	1854118	1854477	.	-	0	ID=cds1816;Parent=gene1959;Dbxref=Genbank:NP_688851.1,GeneID:1014671;Name=NP_688851.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=prophage LambdaSa2%2C Cro/CI family transcriptional regulator;protein_id=NP_688851.1;transl_table=11
NC_004116.1	RefSeq	gene	1854462	1854722	.	-	.	ID=gene1960;Dbxref=GeneID:1014672;Name=SAG1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1862
NC_004116.1	RefSeq	CDS	1854462	1854722	.	-	0	ID=cds1817;Parent=gene1960;Dbxref=Genbank:NP_688852.1,GeneID:1014672;Name=NP_688852.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688852.1;transl_table=11
NC_004116.1	RefSeq	gene	1854732	1855148	.	-	.	ID=gene1961;Dbxref=GeneID:1014673;Name=ssb-4;gbkey=Gene;gene=ssb-4;gene_biotype=protein_coding;locus_tag=SAG1863
NC_004116.1	RefSeq	CDS	1854732	1855148	.	-	0	ID=cds1818;Parent=gene1961;Dbxref=Genbank:NP_688853.1,GeneID:1014673;Name=NP_688853.1;Note=identified by match to PFAM protein family HMM PF00436;gbkey=CDS;gene=ssb-4;product=prophage LambdaSa2%2C single-strand binding protein;protein_id=NP_688853.1;transl_table=11
NC_004116.1	RefSeq	gene	1855138	1855344	.	-	.	ID=gene1962;Dbxref=GeneID:1014674;Name=SAG1864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1864
NC_004116.1	RefSeq	CDS	1855138	1855344	.	-	0	ID=cds1819;Parent=gene1962;Dbxref=Genbank:NP_688854.1,GeneID:1014674;Name=NP_688854.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688854.1;transl_table=11
NC_004116.1	RefSeq	gene	1855341	1855565	.	-	.	ID=gene1963;Dbxref=GeneID:1014675;Name=SAG1865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1865
NC_004116.1	RefSeq	CDS	1855341	1855565	.	-	0	ID=cds1820;Parent=gene1963;Dbxref=Genbank:NP_688855.1,GeneID:1014675;Name=NP_688855.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688855.1;transl_table=11
NC_004116.1	RefSeq	gene	1855697	1856026	.	-	.	ID=gene1964;Dbxref=GeneID:1014676;Name=SAG1866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1866
NC_004116.1	RefSeq	CDS	1855697	1856026	.	-	0	ID=cds1821;Parent=gene1964;Dbxref=Genbank:NP_688856.1,GeneID:1014676;Name=NP_688856.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688856.1;transl_table=11
NC_004116.1	RefSeq	gene	1856026	1856517	.	-	.	ID=gene1965;Dbxref=GeneID:1014677;Name=SAG1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1867
NC_004116.1	RefSeq	CDS	1856026	1856517	.	-	0	ID=cds1822;Parent=gene1965;Dbxref=Genbank:NP_688857.1,GeneID:1014677;Name=NP_688857.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688857.1;transl_table=11
NC_004116.1	RefSeq	gene	1856510	1856914	.	-	.	ID=gene1966;Dbxref=GeneID:1014678;Name=SAG1868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1868
NC_004116.1	RefSeq	CDS	1856510	1856914	.	-	0	ID=cds1823;Parent=gene1966;Dbxref=Genbank:NP_688858.1,GeneID:1014678;Name=NP_688858.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688858.1;transl_table=11
NC_004116.1	RefSeq	gene	1856911	1858224	.	-	.	ID=gene1967;Dbxref=GeneID:1014679;Name=SAG1869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1869
NC_004116.1	RefSeq	CDS	1856911	1858224	.	-	0	ID=cds1824;Parent=gene1967;Dbxref=Genbank:NP_688859.1,GeneID:1014679;Name=NP_688859.1;Note=identified by match to PFAM protein family HMM PF00145%3B Possibly an isoschizomer of Spn5252IP.;gbkey=CDS;product=prophage LambdaSa2%2C type II DNA modification methyltransferase;protein_id=NP_688859.1;transl_table=11
NC_004116.1	RefSeq	gene	1858224	1859045	.	-	.	ID=gene1968;Dbxref=GeneID:1014680;Name=SAG1870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1870
NC_004116.1	RefSeq	CDS	1858224	1859045	.	-	0	ID=cds1825;Parent=gene1968;Dbxref=Genbank:NP_688860.1,GeneID:1014680;Name=NP_688860.1;gbkey=CDS;product=prophage LambdaSa2%2C DNA replication protein DnaC;protein_id=NP_688860.1;transl_table=11
NC_004116.1	RefSeq	gene	1859046	1859792	.	-	.	ID=gene1969;Dbxref=GeneID:1014681;Name=SAG1871;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.%3B prophage LambdaSa2%2C bacteriophage replication protein/hypothetical protein%2C truncation/fusion;gbkey=Gene;gene_biotype=other;locus_tag=SAG1871
NC_004116.1	RefSeq	gene	1859770	1860372	.	-	.	ID=gene1970;Dbxref=GeneID:1014682;Name=SAG1872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1872
NC_004116.1	RefSeq	CDS	1859770	1860372	.	-	0	ID=cds1826;Parent=gene1970;Dbxref=Genbank:NP_688861.1,GeneID:1014682;Name=NP_688861.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688861.1;transl_table=11
NC_004116.1	RefSeq	gene	1860374	1861705	.	-	.	ID=gene1971;Dbxref=GeneID:1014683;Name=dnaC-1;gbkey=Gene;gene=dnaC-1;gene_biotype=protein_coding;locus_tag=SAG1873
NC_004116.1	RefSeq	CDS	1860374	1861705	.	-	0	ID=cds1827;Parent=gene1971;Dbxref=Genbank:NP_688862.1,GeneID:1014683;Name=NP_688862.1;Note=identified by match to PFAM protein family HMM PF00772%3B In low GC Gram-postive bacteria this is known as dnaC. In other prokaryotes%2C functional equivalent known as dnaB.;gbkey=CDS;gene=dnaC-1;product=prophage LambdaSa2%2C replicative DNA helicase;protein_id=NP_688862.1;transl_table=11
NC_004116.1	RefSeq	gene	1861714	1861977	.	-	.	ID=gene1972;Dbxref=GeneID:1014684;Name=SAG1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1874
NC_004116.1	RefSeq	CDS	1861714	1861977	.	-	0	ID=cds1828;Parent=gene1972;Dbxref=Genbank:NP_688863.1,GeneID:1014684;Name=NP_688863.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688863.1;transl_table=11
NC_004116.1	RefSeq	gene	1861956	1862240	.	-	.	ID=gene1973;Dbxref=GeneID:1014685;Name=SAG1875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1875
NC_004116.1	RefSeq	CDS	1861956	1862240	.	-	0	ID=cds1829;Parent=gene1973;Dbxref=Genbank:NP_688864.1,GeneID:1014685;Name=NP_688864.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688864.1;transl_table=11
NC_004116.1	RefSeq	gene	1862240	1862770	.	-	.	ID=gene1974;Dbxref=GeneID:1014686;Name=SAG1876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1876
NC_004116.1	RefSeq	CDS	1862240	1862770	.	-	0	ID=cds1830;Parent=gene1974;Dbxref=Genbank:NP_688865.1,GeneID:1014686;Name=NP_688865.1;Note=identified by match to PFAM protein family HMM PF01844;gbkey=CDS;product=prophage LambdaSa2%2C HNH endonuclease family protein;protein_id=NP_688865.1;transl_table=11
NC_004116.1	RefSeq	gene	1862833	1863543	.	-	.	ID=gene1975;Dbxref=GeneID:1014687;Name=SAG1877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1877
NC_004116.1	RefSeq	CDS	1862833	1863543	.	-	0	ID=cds1831;Parent=gene1975;Dbxref=Genbank:NP_688866.1,GeneID:1014687;Name=NP_688866.1;Note=identified by match to PFAM protein family HMM PF02498;gbkey=CDS;product=prophage LambdaSa2%2C antirepressor protein;protein_id=NP_688866.1;transl_table=11
NC_004116.1	RefSeq	gene	1863546	1863854	.	-	.	ID=gene1976;Dbxref=GeneID:1014688;Name=SAG1878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1878
NC_004116.1	RefSeq	CDS	1863546	1863854	.	-	0	ID=cds1832;Parent=gene1976;Dbxref=Genbank:NP_688867.1,GeneID:1014688;Name=NP_688867.1;Note=similar to GP:3676450%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688867.1;transl_table=11
NC_004116.1	RefSeq	gene	1863816	1864286	.	+	.	ID=gene1977;Dbxref=GeneID:1014689;Name=SAG1879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1879
NC_004116.1	RefSeq	CDS	1863816	1864286	.	+	0	ID=cds1833;Parent=gene1977;Dbxref=Genbank:NP_688868.1,GeneID:1014689;Name=NP_688868.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688868.1;transl_table=11
NC_004116.1	RefSeq	gene	1864269	1864433	.	-	.	ID=gene1978;Dbxref=GeneID:1014690;Name=SAG1880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1880
NC_004116.1	RefSeq	CDS	1864269	1864433	.	-	0	ID=cds1834;Parent=gene1978;Dbxref=Genbank:NP_688869.1,GeneID:1014690;Name=NP_688869.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688869.1;transl_table=11
NC_004116.1	RefSeq	gene	1864415	1864570	.	-	.	ID=gene1979;Dbxref=GeneID:1014691;Name=SAG1881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1881
NC_004116.1	RefSeq	CDS	1864415	1864570	.	-	0	ID=cds1835;Parent=gene1979;Dbxref=Genbank:NP_688870.1,GeneID:1014691;Name=NP_688870.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688870.1;transl_table=11
NC_004116.1	RefSeq	gene	1864719	1865081	.	+	.	ID=gene1980;Dbxref=GeneID:1014692;Name=SAG1882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1882
NC_004116.1	RefSeq	CDS	1864719	1865081	.	+	0	ID=cds1836;Parent=gene1980;Dbxref=Genbank:NP_688871.1,GeneID:1014692;Name=NP_688871.1;gbkey=CDS;product=prophage LambdaSa2%2C repressor protein;protein_id=NP_688871.1;transl_table=11
NC_004116.1	RefSeq	gene	1865082	1865468	.	+	.	ID=gene1981;Dbxref=GeneID:1014693;Name=SAG1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1883
NC_004116.1	RefSeq	CDS	1865082	1865468	.	+	0	ID=cds1837;Parent=gene1981;Dbxref=Genbank:NP_688872.1,GeneID:1014693;Name=NP_688872.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688872.1;transl_table=11
NC_004116.1	RefSeq	gene	1865521	1865925	.	+	.	ID=gene1982;Dbxref=GeneID:1014694;Name=SAG1884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1884
NC_004116.1	RefSeq	CDS	1865521	1865925	.	+	0	ID=cds1838;Parent=gene1982;Dbxref=Genbank:NP_688873.1,GeneID:1014694;Name=NP_688873.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688873.1;transl_table=11
NC_004116.1	RefSeq	gene	1866047	1867117	.	+	.	ID=gene1983;Dbxref=GeneID:1014695;Name=SAG1885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1885
NC_004116.1	RefSeq	CDS	1866047	1867117	.	+	0	ID=cds1839;Parent=gene1983;Dbxref=Genbank:NP_688874.1,GeneID:1014695;Name=NP_688874.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=prophage LambdaSa2%2C site-specific recombinase phage integrase family protein;protein_id=NP_688874.1;transl_table=11
NC_004116.1	RefSeq	gene	1867119	1867217	.	+	.	ID=gene1984;Dbxref=GeneID:1014696;Name=SAG1886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1886
NC_004116.1	RefSeq	CDS	1867119	1867217	.	+	0	ID=cds1840;Parent=gene1984;Dbxref=Genbank:NP_688875.1,GeneID:1014696;Name=NP_688875.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688875.1;transl_table=11
NC_004116.1	RefSeq	gene	1867260	1869329	.	-	.	ID=gene1985;Dbxref=GeneID:1014697;Name=SAG1887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1887
NC_004116.1	RefSeq	CDS	1867260	1869329	.	-	0	ID=cds1841;Parent=gene1985;Dbxref=Genbank:NP_688876.1,GeneID:1014697;Name=NP_688876.1;Note=identified by match to PFAM protein family HMM PF00999;gbkey=CDS;product=Na+/H+ exchanger family protein;protein_id=NP_688876.1;transl_table=11
NC_004116.1	RefSeq	gene	1869331	1869567	.	-	.	ID=gene1986;Dbxref=GeneID:1014698;Name=SAG1888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1888
NC_004116.1	RefSeq	CDS	1869331	1869567	.	-	0	ID=cds1842;Parent=gene1986;Dbxref=Genbank:NP_688877.1,GeneID:1014698;Name=NP_688877.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688877.1;transl_table=11
NC_004116.1	RefSeq	gene	1869734	1870687	.	+	.	ID=gene1987;Dbxref=GeneID:1014699;Name=SAG1889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1889
NC_004116.1	RefSeq	CDS	1869734	1870687	.	+	0	ID=cds1843;Parent=gene1987;Dbxref=Genbank:NP_688878.1,GeneID:1014699;Name=NP_688878.1;Note=identified by match to PFAM protein family HMM PF02016;gbkey=CDS;product=microcin immunity protein MccF;protein_id=NP_688878.1;transl_table=11
NC_004116.1	RefSeq	gene	1870737	1872632	.	-	.	ID=gene1988;Dbxref=GeneID:1014700;Name=pepO;gbkey=Gene;gene=pepO;gene_biotype=protein_coding;locus_tag=SAG1890
NC_004116.1	RefSeq	CDS	1870737	1872632	.	-	0	ID=cds1844;Parent=gene1988;Dbxref=Genbank:NP_688879.1,GeneID:1014700;Name=NP_688879.1;Note=identified by match to PFAM protein family HMM PF01431;gbkey=CDS;gene=pepO;product=endopeptidase O;protein_id=NP_688879.1;transl_table=11
NC_004116.1	RefSeq	gene	1872780	1873763	.	+	.	ID=gene1989;Dbxref=GeneID:1014701;Name=SAG1891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1891
NC_004116.1	RefSeq	CDS	1872780	1873763	.	+	0	ID=cds1845;Parent=gene1989;Dbxref=Genbank:NP_688880.1,GeneID:1014701;Name=NP_688880.1;Note=identified by match to PFAM protein family HMM PF01408;gbkey=CDS;product=Gfo/Idh/MocA family oxidoreductase;protein_id=NP_688880.1;transl_table=11
NC_004116.1	RefSeq	gene	1873809	1874885	.	-	.	ID=gene1990;Dbxref=GeneID:1014702;Name=SAG1892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1892
NC_004116.1	RefSeq	CDS	1873809	1874885	.	-	0	ID=cds1846;Parent=gene1990;Dbxref=Genbank:NP_688881.1,GeneID:1014702;Name=NP_688881.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688881.1;transl_table=11
NC_004116.1	RefSeq	gene	1874869	1875048	.	-	.	ID=gene1991;Dbxref=GeneID:1014703;Name=SAG1893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1893
NC_004116.1	RefSeq	CDS	1874869	1875048	.	-	0	ID=cds1847;Parent=gene1991;Dbxref=Genbank:NP_688882.1,GeneID:1014703;Name=NP_688882.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688882.1;transl_table=11
NC_004116.1	RefSeq	gene	1875084	1875728	.	+	.	ID=gene1992;Dbxref=GeneID:1014704;Name=SAG1894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1894
NC_004116.1	RefSeq	CDS	1875084	1875728	.	+	0	ID=cds1848;Parent=gene1992;Dbxref=Genbank:NP_688883.1,GeneID:1014704;Name=NP_688883.1;Note=identified by match to PFAM protein family HMM PF00027;gbkey=CDS;product=cyclic nucleotide-binding protein;protein_id=NP_688883.1;transl_table=11
NC_004116.1	RefSeq	gene	1875794	1876408	.	+	.	ID=gene1993;Dbxref=GeneID:1014705;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=SAG1895
NC_004116.1	RefSeq	CDS	1875794	1876408	.	+	0	ID=cds1849;Parent=gene1993;Dbxref=Genbank:NP_688884.1,GeneID:1014705;Name=NP_688884.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;gene=def;product=peptide deformylase;protein_id=NP_688884.1;transl_table=11
NC_004116.1	RefSeq	gene	1876479	1877480	.	-	.	ID=gene1994;Dbxref=GeneID:1014706;Name=regR;gbkey=Gene;gene=regR;gene_biotype=protein_coding;locus_tag=SAG1896
NC_004116.1	RefSeq	CDS	1876479	1877480	.	-	0	ID=cds1850;Parent=gene1994;Dbxref=Genbank:NP_688885.1,GeneID:1014706;Name=NP_688885.1;Note=identified by match to PFAM protein family HMM PF00532;gbkey=CDS;gene=regR;product=RegR family transcriptional regulator;protein_id=NP_688885.1;transl_table=11
NC_004116.1	RefSeq	gene	1877560	1879464	.	-	.	ID=gene1995;Dbxref=GeneID:1014707;Name=SAG1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1897
NC_004116.1	RefSeq	CDS	1877560	1879464	.	-	0	ID=cds1851;Parent=gene1995;Dbxref=Genbank:NP_688886.1,GeneID:1014707;Name=NP_688886.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688886.1;transl_table=11
NC_004116.1	RefSeq	gene	1879544	1880359	.	-	.	ID=gene1996;Dbxref=GeneID:1014708;Name=SAG1898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1898
NC_004116.1	RefSeq	CDS	1879544	1880359	.	-	0	ID=cds1852;Parent=gene1996;Dbxref=Genbank:NP_688887.1,GeneID:1014708;Name=NP_688887.1;gbkey=CDS;product=PTS system transporter subunit IID;protein_id=NP_688887.1;transl_table=11
NC_004116.1	RefSeq	gene	1880346	1881212	.	-	.	ID=gene1997;Dbxref=GeneID:1014709;Name=SAG1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1899
NC_004116.1	RefSeq	CDS	1880346	1881212	.	-	0	ID=cds1853;Parent=gene1997;Dbxref=Genbank:NP_688888.1,GeneID:1014709;Name=NP_688888.1;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=NP_688888.1;transl_table=11
NC_004116.1	RefSeq	gene	1881248	1881742	.	-	.	ID=gene1998;Dbxref=GeneID:1014710;Name=SAG1900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1900
NC_004116.1	RefSeq	CDS	1881248	1881742	.	-	0	ID=cds1854;Parent=gene1998;Dbxref=Genbank:NP_688889.1,GeneID:1014710;Name=NP_688889.1;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=NP_688889.1;transl_table=11
NC_004116.1	RefSeq	gene	1881797	1882993	.	-	.	ID=gene1999;Dbxref=GeneID:1014711;Name=SAG1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1901
NC_004116.1	RefSeq	CDS	1881797	1882993	.	-	0	ID=cds1855;Parent=gene1999;Dbxref=Genbank:NP_688890.1,GeneID:1014711;Name=NP_688890.1;Note=similar to GP:5869507%3B identified by sequence similarity;gbkey=CDS;product=glucuronyl hydrolase;protein_id=NP_688890.1;transl_table=11
NC_004116.1	RefSeq	gene	1882996	1883430	.	-	.	ID=gene2000;Dbxref=GeneID:1014712;Name=SAG1902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1902
NC_004116.1	RefSeq	CDS	1882996	1883430	.	-	0	ID=cds1856;Parent=gene2000;Dbxref=Genbank:NP_688891.1,GeneID:1014712;Name=NP_688891.1;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=NP_688891.1;transl_table=11
NC_004116.1	RefSeq	gene	1883531	1883635	.	+	.	ID=gene2001;Dbxref=GeneID:1014713;Name=SAG1903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1903
NC_004116.1	RefSeq	CDS	1883531	1883635	.	+	0	ID=cds1857;Parent=gene2001;Dbxref=Genbank:NP_688892.1,GeneID:1014713;Name=NP_688892.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688892.1;transl_table=11
NC_004116.1	RefSeq	gene	1883708	1884520	.	+	.	ID=gene2002;Dbxref=GeneID:1014714;Name=SAG1904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1904
NC_004116.1	RefSeq	CDS	1883708	1884520	.	+	0	ID=cds1858;Parent=gene2002;Dbxref=Genbank:NP_688893.1,GeneID:1014714;Name=NP_688893.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=NP_688893.1;transl_table=11
NC_004116.1	RefSeq	gene	1884537	1885175	.	+	.	ID=gene2003;Dbxref=GeneID:1014715;Name=SAG1905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1905
NC_004116.1	RefSeq	CDS	1884537	1885175	.	+	0	ID=cds1859;Parent=gene2003;Dbxref=Genbank:NP_688894.1,GeneID:1014715;Name=NP_688894.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688894.1;transl_table=11
NC_004116.1	RefSeq	gene	1885201	1886208	.	+	.	ID=gene2004;Dbxref=GeneID:1014716;Name=SAG1906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1906
NC_004116.1	RefSeq	CDS	1885201	1886208	.	+	0	ID=cds1860;Parent=gene2004;Dbxref=Genbank:NP_688895.1,GeneID:1014716;Name=NP_688895.1;Note=identified by match to PFAM protein family HMM PF00294;gbkey=CDS;product=carbohydrate kinase;protein_id=NP_688895.1;transl_table=11
NC_004116.1	RefSeq	gene	1886220	1886858	.	+	.	ID=gene2005;Dbxref=GeneID:1014717;Name=eda-2;gbkey=Gene;gene=eda-2;gene_biotype=protein_coding;locus_tag=SAG1907
NC_004116.1	RefSeq	CDS	1886220	1886858	.	+	0	ID=cds1861;Parent=gene2005;Dbxref=Genbank:NP_688896.1,GeneID:1014717;Name=NP_688896.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;gene=eda-2;product=keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase;protein_id=NP_688896.1;transl_table=11
NC_004116.1	RefSeq	gene	1887919	1889418	.	+	.	ID=gene2006;Dbxref=GeneID:1014718;Name=SAG1908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1908
NC_004116.1	RefSeq	CDS	1887919	1889418	.	+	0	ID=cds1862;Parent=gene2006;Dbxref=Genbank:NP_688897.1,GeneID:1014718;Name=NP_688897.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688897.1;transl_table=11
NC_004116.1	RefSeq	gene	1889589	1890203	.	-	.	ID=gene2007;Dbxref=GeneID:1014719;Name=SAG1909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1909
NC_004116.1	RefSeq	CDS	1889589	1890203	.	-	0	ID=cds1863;Parent=gene2007;Dbxref=Genbank:NP_688898.1,GeneID:1014719;Name=NP_688898.1;Note=identified by match to PFAM protein family HMM PF00881;gbkey=CDS;product=nitroreductase family protein;protein_id=NP_688898.1;transl_table=11
NC_004116.1	RefSeq	gene	1890336	1890761	.	-	.	ID=gene2008;Dbxref=GeneID:1014720;Name=SAG1910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1910
NC_004116.1	RefSeq	CDS	1890336	1890761	.	-	0	ID=cds1864;Parent=gene2008;Dbxref=Genbank:NP_688899.1,GeneID:1014720;Name=NP_688899.1;Note=identified by match to PFAM protein family HMM PF01047;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=NP_688899.1;transl_table=11
NC_004116.1	RefSeq	gene	1890888	1895294	.	-	.	ID=gene2009;Dbxref=GeneID:1014721;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=SAG1911
NC_004116.1	RefSeq	CDS	1890888	1895294	.	-	0	ID=cds1865;Parent=gene2009;Dbxref=Genbank:NP_688900.1,GeneID:1014721;Name=NP_688900.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B required for leading strand synthesis%3B PolC exhibits 3' to 5' exonuclease activity;gbkey=CDS;gene=polC;product=DNA polymerase III PolC;protein_id=NP_688900.1;transl_table=11
NC_004116.1	RefSeq	gene	1895417	1896001	.	-	.	ID=gene2010;Dbxref=GeneID:1014722;Name=SAG1912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1912
NC_004116.1	RefSeq	CDS	1895417	1896001	.	-	0	ID=cds1866;Parent=gene2010;Dbxref=Genbank:NP_688901.1,GeneID:1014722;Name=NP_688901.1;Note=identified by match to PFAM protein family HMM PF01832;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=NP_688901.1;transl_table=11
NC_004116.1	RefSeq	gene	1896126	1897979	.	-	.	ID=gene2011;Dbxref=GeneID:1014723;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=SAG1913
NC_004116.1	RefSeq	CDS	1896126	1897979	.	-	0	ID=cds1867;Parent=gene2011;Dbxref=Genbank:NP_688902.1,GeneID:1014723;Name=NP_688902.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=NP_688902.1;transl_table=11
NC_004116.1	RefSeq	gene	1898071	1899330	.	-	.	ID=gene2012;Dbxref=GeneID:1014724;Name=SAG1914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1914
NC_004116.1	RefSeq	CDS	1898071	1899330	.	-	0	ID=cds1868;Parent=gene2012;Dbxref=Genbank:NP_688903.1,GeneID:1014724;Name=NP_688903.1;Note=identified by match to TIGR protein family HMM TIGR00054;gbkey=CDS;product=zinc metalloprotease;protein_id=NP_688903.1;transl_table=11
NC_004116.1	RefSeq	gene	1899361	1900155	.	-	.	ID=gene2013;Dbxref=GeneID:1014725;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SAG1915
NC_004116.1	RefSeq	CDS	1899361	1900155	.	-	0	ID=cds1869;Parent=gene2013;Dbxref=Genbank:NP_688904.1,GeneID:1014725;Name=NP_688904.1;Note=identified by match to PFAM protein family HMM PF01148;gbkey=CDS;gene=cdsA;product=phosphatidate cytidylyltransferase;protein_id=NP_688904.1;transl_table=11
NC_004116.1	RefSeq	gene	1900170	1900922	.	-	.	ID=gene2014;Dbxref=GeneID:1014726;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=SAG1916
NC_004116.1	RefSeq	CDS	1900170	1900922	.	-	0	ID=cds1870;Parent=gene2014;Dbxref=Genbank:NP_688905.1,GeneID:1014726;Name=NP_688905.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;gene=uppS;product=undecaprenyl pyrophosphate synthase;protein_id=NP_688905.1;transl_table=11
NC_004116.1	RefSeq	gene	1901089	1901430	.	-	.	ID=gene2015;Dbxref=GeneID:1014727;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SAG1917
NC_004116.1	RefSeq	CDS	1901089	1901430	.	-	0	ID=cds1871;Parent=gene2015;Dbxref=Genbank:NP_688906.1,GeneID:1014727;Name=NP_688906.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=NP_688906.1;transl_table=11
NC_004116.1	RefSeq	gene	1901507	1901851	.	-	.	ID=gene2016;Dbxref=GeneID:1014728;Name=SAG1918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1918
NC_004116.1	RefSeq	CDS	1901507	1901851	.	-	0	ID=cds1872;Parent=gene2016;Dbxref=Genbank:NP_688907.1,GeneID:1014728;Name=NP_688907.1;Note=The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688907.1;transl_table=11
NC_004116.1	RefSeq	gene	1902042	1903205	.	-	.	ID=gene2017;Dbxref=GeneID:1014729;Name=SAG1919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1919
NC_004116.1	RefSeq	CDS	1902042	1903205	.	-	0	ID=cds1873;Parent=gene2017;Dbxref=Genbank:NP_688908.1,GeneID:1014729;Name=NP_688908.1;Note=identified by match to PFAM protein family HMM PF00390;gbkey=CDS;product=malate oxidoreductase;protein_id=NP_688908.1;transl_table=11
NC_004116.1	RefSeq	gene	1903230	1904567	.	-	.	ID=gene2018;Dbxref=GeneID:1014730;Name=SAG1920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1920
NC_004116.1	RefSeq	CDS	1903230	1904567	.	-	0	ID=cds1874;Parent=gene2018;Dbxref=Genbank:NP_688909.1,GeneID:1014730;Name=NP_688909.1;Note=identified by match to PFAM protein family HMM PF03390;gbkey=CDS;product=CCS family citrate carrier protein;protein_id=NP_688909.1;transl_table=11
NC_004116.1	RefSeq	gene	1904721	1906247	.	+	.	ID=gene2019;Dbxref=GeneID:1014731;Name=SAG1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1921
NC_004116.1	RefSeq	CDS	1904721	1906247	.	+	0	ID=cds1875;Parent=gene2019;Dbxref=Genbank:NP_688910.1,GeneID:1014731;Name=NP_688910.1;Note=similar to OMNI:NTL01SPL0863%3B identified by sequence similarity;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_688910.1;transl_table=11
NC_004116.1	RefSeq	gene	1906249	1906938	.	+	.	ID=gene2020;Dbxref=GeneID:1014732;Name=SAG1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1922
NC_004116.1	RefSeq	CDS	1906249	1906938	.	+	0	ID=cds1876;Parent=gene2020;Dbxref=Genbank:NP_688911.1,GeneID:1014732;Name=NP_688911.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=response regulator;protein_id=NP_688911.1;transl_table=11
NC_004116.1	RefSeq	gene	1906951	1907946	.	-	.	ID=gene2021;Dbxref=GeneID:1014733;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=SAG1923
NC_004116.1	RefSeq	CDS	1906951	1907946	.	-	0	ID=cds1877;Parent=gene2021;Dbxref=Genbank:NP_688912.1,GeneID:1014733;Name=NP_688912.1;Note=identified by match to PFAM protein family HMM PF01370;gbkey=CDS;gene=galE;product=UDP-glucose 4-epimerase;protein_id=NP_688912.1;transl_table=11
NC_004116.1	RefSeq	gene	1908034	1909641	.	-	.	ID=gene2022;Dbxref=GeneID:1014734;Name=dexB;gbkey=Gene;gene=dexB;gene_biotype=protein_coding;locus_tag=SAG1924
NC_004116.1	RefSeq	CDS	1908034	1909641	.	-	0	ID=cds1878;Parent=gene2022;Dbxref=Genbank:NP_688913.1,GeneID:1014734;Name=NP_688913.1;Note=identified by match to PFAM protein family HMM PF00128;gbkey=CDS;gene=dexB;product=glucan 1%2C6-alpha-glucosidase;protein_id=NP_688913.1;transl_table=11
NC_004116.1	RefSeq	gene	1909769	1910902	.	-	.	ID=gene2023;Dbxref=GeneID:1014735;Name=SAG1925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1925
NC_004116.1	RefSeq	CDS	1909769	1910902	.	-	0	ID=cds1879;Parent=gene2023;Dbxref=Genbank:NP_688914.1,GeneID:1014735;Name=NP_688914.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=NP_688914.1;transl_table=11
NC_004116.1	RefSeq	gene	1911003	1911854	.	-	.	ID=gene2024;Dbxref=GeneID:1014736;Name=SAG1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1926
NC_004116.1	RefSeq	CDS	1911003	1911854	.	-	0	ID=cds1880;Parent=gene2024;Dbxref=Genbank:NP_688915.1,GeneID:1014736;Name=NP_688915.1;Note=identified by match to TIGR protein family HMM TIGR01199;gbkey=CDS;product=helix-turn-helix domain-containing protein;protein_id=NP_688915.1;transl_table=11
NC_004116.1	RefSeq	gene	1911949	1912845	.	-	.	ID=gene2025;Dbxref=GeneID:1014737;Name=SAG1927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1927
NC_004116.1	RefSeq	CDS	1911949	1912845	.	-	0	ID=cds1881;Parent=gene2025;Dbxref=Genbank:NP_688916.1,GeneID:1014737;Name=NP_688916.1;Note=identified by match to PFAM protein family HMM PF02693;gbkey=CDS;product=aldolase 1 epimerase LacX;protein_id=NP_688916.1;transl_table=11
NC_004116.1	RefSeq	gene	1912899	1913876	.	-	.	ID=gene2026;Dbxref=GeneID:1014738;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=SAG1928
NC_004116.1	RefSeq	CDS	1912899	1913876	.	-	0	ID=cds1882;Parent=gene2026;Dbxref=Genbank:NP_688917.1,GeneID:1014738;Name=NP_688917.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase%2C encoded by lacD1 and lacD2%3B expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources;gbkey=CDS;gene=lacD;product=tagatose 1%2C6-diphosphate aldolase;protein_id=NP_688917.1;transl_table=11
NC_004116.1	RefSeq	gene	1913878	1914810	.	-	.	ID=gene2027;Dbxref=GeneID:1014739;Name=lacC;gbkey=Gene;gene=lacC;gene_biotype=protein_coding;locus_tag=SAG1929
NC_004116.1	RefSeq	CDS	1913878	1914810	.	-	0	ID=cds1883;Parent=gene2027;Dbxref=Genbank:NP_688918.1,GeneID:1014739;Name=NP_688918.1;Note=catalyzes the formation of tagatose 1%2C6-bisphosphate from tagatose 6-phosphate and ATP;gbkey=CDS;gene=lacC;product=tagatose-6-phosphate kinase;protein_id=NP_688918.1;transl_table=11
NC_004116.1	RefSeq	gene	1914821	1915336	.	-	.	ID=gene2028;Dbxref=GeneID:1014740;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=SAG1930
NC_004116.1	RefSeq	CDS	1914821	1915336	.	-	0	ID=cds1884;Parent=gene2028;Dbxref=Genbank:NP_688919.1,GeneID:1014740;Name=NP_688919.1;Note=catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate;gbkey=CDS;gene=lacB;product=galactose-6-phosphate isomerase subunit LacB;protein_id=NP_688919.1;transl_table=11
NC_004116.1	RefSeq	gene	1915357	1915782	.	-	.	ID=gene2029;Dbxref=GeneID:1014741;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=SAG1931
NC_004116.1	RefSeq	CDS	1915357	1915782	.	-	0	ID=cds1885;Parent=gene2029;Dbxref=Genbank:NP_688920.1,GeneID:1014741;Name=NP_688920.1;Note=catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate%3B tagatose pathway for galactose utilization;gbkey=CDS;gene=lacA;product=galactose-6-phosphate isomerase subunit LacA;protein_id=NP_688920.1;transl_table=11
NC_004116.1	RefSeq	gene	1916030	1918480	.	-	.	ID=gene2030;Dbxref=GeneID:1014742;Name=SAG1932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1932
NC_004116.1	RefSeq	CDS	1916030	1918480	.	-	0	ID=cds1886;Parent=gene2030;Dbxref=Genbank:NP_688921.1,GeneID:1014742;Name=NP_688921.1;Note=identified by match to PFAM protein family HMM PF02012;gbkey=CDS;product=neuraminidase-like protein;protein_id=NP_688921.1;transl_table=11
NC_004116.1	RefSeq	gene	1918719	1920167	.	-	.	ID=gene2031;Dbxref=GeneID:1014743;Name=SAG1933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1933
NC_004116.1	RefSeq	CDS	1918719	1920167	.	-	0	ID=cds1887;Parent=gene2031;Dbxref=Genbank:NP_688922.1,GeneID:1014743;Name=NP_688922.1;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=NP_688922.1;transl_table=11
NC_004116.1	RefSeq	gene	1920207	1920512	.	-	.	ID=gene2032;Dbxref=GeneID:1014744;Name=SAG1934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1934
NC_004116.1	RefSeq	CDS	1920207	1920512	.	-	0	ID=cds1888;Parent=gene2032;Dbxref=Genbank:NP_688923.1,GeneID:1014744;Name=NP_688923.1;Note=similar to OMNI:NTL01SPL1345%3B identified by sequence similarity;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=NP_688923.1;transl_table=11
NC_004116.1	RefSeq	gene	1920514	1920987	.	-	.	ID=gene2033;Dbxref=GeneID:1014745;Name=SAG1935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1935
NC_004116.1	RefSeq	CDS	1920514	1920987	.	-	0	ID=cds1889;Parent=gene2033;Dbxref=Genbank:NP_688924.1,GeneID:1014745;Name=NP_688924.1;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=NP_688924.1;transl_table=11
NC_004116.1	RefSeq	gene	1921197	1921973	.	+	.	ID=gene2034;Dbxref=GeneID:1014746;Name=lacR-2;gbkey=Gene;gene=lacR-2;gene_biotype=protein_coding;locus_tag=SAG1936
NC_004116.1	RefSeq	CDS	1921197	1921973	.	+	0	ID=cds1890;Parent=gene2034;Dbxref=Genbank:NP_688925.1,GeneID:1014746;Name=NP_688925.1;Note=identified by match to PFAM protein family HMM PF00455;gbkey=CDS;gene=lacR-2;product=lactose phosphotransferase system repressor;protein_id=NP_688925.1;transl_table=11
NC_004116.1	RefSeq	gene	1922255	1924784	.	-	.	ID=gene2035;Dbxref=GeneID:1014747;Name=SAG1937;Note=This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact%3B similar to GP:12744742%3B identified by sequence similarity%3B streptococcal histidine triad family protein%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG1937
NC_004116.1	RefSeq	gene	1924811	1925734	.	-	.	ID=gene2036;Dbxref=GeneID:1014748;Name=SAG1938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1938
NC_004116.1	RefSeq	CDS	1924811	1925734	.	-	0	ID=cds1891;Parent=gene2036;Dbxref=Genbank:NP_688926.1,GeneID:1014748;Name=NP_688926.1;Note=identified by match to PFAM protein family HMM PF01297%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=adhesion lipoprotein;protein_id=NP_688926.1;transl_table=11
NC_004116.1	RefSeq	gene	1925989	1926432	.	-	.	ID=gene2037;Dbxref=GeneID:1014749;Name=SAG1939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1939
NC_004116.1	RefSeq	CDS	1925989	1926432	.	-	0	ID=cds1892;Parent=gene2037;Dbxref=Genbank:NP_688927.1,GeneID:1014749;Name=NP_688927.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=NP_688927.1;transl_table=11
NC_004116.1	RefSeq	gene	1926442	1928658	.	-	.	ID=gene2038;Dbxref=GeneID:1014750;Name=SAG1940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1940
NC_004116.1	RefSeq	CDS	1926442	1928658	.	-	0	ID=cds1893;Parent=gene2038;Dbxref=Genbank:NP_688928.1,GeneID:1014750;Name=NP_688928.1;Note=identified by match to PFAM protein family HMM PF01842;gbkey=CDS;product=GTP pyrophosphokinase;protein_id=NP_688928.1;transl_table=11
NC_004116.1	RefSeq	gene	1928918	1931320	.	+	.	ID=gene2039;Dbxref=GeneID:1014751;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;gene_synonym=yfkN;locus_tag=SAG1941
NC_004116.1	RefSeq	CDS	1928918	1931320	.	+	0	ID=cds1894;Parent=gene2039;Dbxref=Genbank:NP_688929.1,GeneID:1014751;Name=NP_688929.1;Note=in Escherichia coli this is a periplasmic enzyme while in gram positive organisms it may be anchored at the cell surface%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=bifunctional 2'%2C3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein;protein_id=NP_688929.1;transl_table=11
NC_004116.1	RefSeq	gene	1931477	1931932	.	+	.	ID=gene2040;Dbxref=GeneID:1014752;Name=nrdI-2;gbkey=Gene;gene=nrdI-2;gene_biotype=protein_coding;locus_tag=SAG1942
NC_004116.1	RefSeq	CDS	1931477	1931932	.	+	0	ID=cds1895;Parent=gene2040;Dbxref=Genbank:NP_688930.1,GeneID:1014752;Name=NP_688930.1;Note=has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI-2;product=flavoprotein NrdI;protein_id=NP_688930.1;transl_table=11
NC_004116.1	RefSeq	gene	1931943	1932980	.	+	.	ID=gene2041;Dbxref=GeneID:1014753;Name=SAG1943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1943
NC_004116.1	RefSeq	CDS	1931943	1932980	.	+	0	ID=cds1896;Parent=gene2041;Dbxref=Genbank:NP_688931.1,GeneID:1014753;Name=NP_688931.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688931.1;transl_table=11
NC_004116.1	RefSeq	gene	1932980	1933477	.	+	.	ID=gene2042;Dbxref=GeneID:1014754;Name=SAG1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1944
NC_004116.1	RefSeq	CDS	1932980	1933477	.	+	0	ID=cds1897;Parent=gene2042;Dbxref=Genbank:NP_688932.1,GeneID:1014754;Name=NP_688932.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688932.1;transl_table=11
NC_004116.1	RefSeq	gene	1933699	1934736	.	-	.	ID=gene2043;Dbxref=GeneID:1014755;Name=SAG1945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1945
NC_004116.1	RefSeq	CDS	1933699	1934736	.	-	0	ID=cds1898;Parent=gene2043;Dbxref=Genbank:NP_688933.1,GeneID:1014755;Name=NP_688933.1;Note=identified by match to PFAM protein family HMM PF01547;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=NP_688933.1;transl_table=11
NC_004116.1	RefSeq	gene	1934748	1935521	.	-	.	ID=gene2044;Dbxref=GeneID:1014756;Name=SAG1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1946
NC_004116.1	RefSeq	CDS	1934748	1935521	.	-	0	ID=cds1899;Parent=gene2044;Dbxref=Genbank:NP_688934.1,GeneID:1014756;Name=NP_688934.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_688934.1;transl_table=11
NC_004116.1	RefSeq	gene	1935525	1937174	.	-	.	ID=gene2045;Dbxref=GeneID:1014757;Name=SAG1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1947
NC_004116.1	RefSeq	CDS	1935525	1937174	.	-	0	ID=cds1900;Parent=gene2045;Dbxref=Genbank:NP_688935.1,GeneID:1014757;Name=NP_688935.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688935.1;transl_table=11
NC_004116.1	RefSeq	gene	1937312	1938139	.	-	.	ID=gene2046;Dbxref=GeneID:1014758;Name=SAG1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1948
NC_004116.1	RefSeq	CDS	1937312	1938139	.	-	0	ID=cds1901;Parent=gene2046;Dbxref=Genbank:NP_688936.1,GeneID:1014758;Name=NP_688936.1;gbkey=CDS;product=PTS system transporter subunit IID;protein_id=NP_688936.1;transl_table=11
NC_004116.1	RefSeq	gene	1938136	1938945	.	-	.	ID=gene2047;Dbxref=GeneID:1014759;Name=SAG1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1949
NC_004116.1	RefSeq	CDS	1938136	1938945	.	-	0	ID=cds1902;Parent=gene2047;Dbxref=Genbank:NP_688937.1,GeneID:1014759;Name=NP_688937.1;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=NP_688937.1;transl_table=11
NC_004116.1	RefSeq	gene	1938961	1939452	.	-	.	ID=gene2048;Dbxref=GeneID:1014760;Name=SAG1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1950
NC_004116.1	RefSeq	CDS	1938961	1939452	.	-	0	ID=cds1903;Parent=gene2048;Dbxref=Genbank:NP_688938.1,GeneID:1014760;Name=NP_688938.1;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=NP_688938.1;transl_table=11
NC_004116.1	RefSeq	gene	1939470	1939895	.	-	.	ID=gene2049;Dbxref=GeneID:1014761;Name=SAG1951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1951
NC_004116.1	RefSeq	CDS	1939470	1939895	.	-	0	ID=cds1904;Parent=gene2049;Dbxref=Genbank:NP_688939.1,GeneID:1014761;Name=NP_688939.1;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=NP_688939.1;transl_table=11
NC_004116.1	RefSeq	gene	1940142	1941203	.	-	.	ID=gene2050;Dbxref=GeneID:1014762;Name=SAG1952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1952
NC_004116.1	RefSeq	CDS	1940142	1941203	.	-	0	ID=cds1905;Parent=gene2050;Dbxref=Genbank:NP_688940.1,GeneID:1014762;Name=NP_688940.1;Note=similar to GP:7960293%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688940.1;transl_table=11
NC_004116.1	RefSeq	gene	1941228	1941410	.	+	.	ID=gene2051;Dbxref=GeneID:1014763;Name=SAG1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1953
NC_004116.1	RefSeq	CDS	1941228	1941410	.	+	0	ID=cds1906;Parent=gene2051;Dbxref=Genbank:NP_688941.1,GeneID:1014763;Name=NP_688941.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688941.1;transl_table=11
NC_004116.1	RefSeq	gene	1941405	1942559	.	-	.	ID=gene2052;Dbxref=GeneID:1014764;Name=SAG1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1954
NC_004116.1	RefSeq	CDS	1941405	1942559	.	-	0	ID=cds1907;Parent=gene2052;Dbxref=Genbank:NP_688942.1,GeneID:1014764;Name=NP_688942.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688942.1;transl_table=11
NC_004116.1	RefSeq	gene	1942565	1943413	.	-	.	ID=gene2053;Dbxref=GeneID:1014765;Name=SAG1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1955
NC_004116.1	RefSeq	CDS	1942565	1943413	.	-	0	ID=cds1908;Parent=gene2053;Dbxref=Genbank:NP_688943.1,GeneID:1014765;Name=NP_688943.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688943.1;transl_table=11
NC_004116.1	RefSeq	gene	1943536	1943826	.	-	.	ID=gene2054;Dbxref=GeneID:1014766;Name=SAG1956;Note=This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact%3B identified by Glimmer2%3B conserved hypothetical protein%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SAG1956
NC_004116.1	RefSeq	gene	1943904	1944656	.	-	.	ID=gene2055;Dbxref=GeneID:1014767;Name=SAG1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1957
NC_004116.1	RefSeq	CDS	1943904	1944656	.	-	0	ID=cds1909;Parent=gene2055;Dbxref=Genbank:NP_688944.1,GeneID:1014767;Name=NP_688944.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=response regulator;protein_id=NP_688944.1;transl_table=11
NC_004116.1	RefSeq	gene	1944933	1945763	.	-	.	ID=gene2056;Dbxref=GeneID:1014768;Name=SAG1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1958
NC_004116.1	RefSeq	CDS	1944933	1945763	.	-	0	ID=cds1910;Parent=gene2056;Dbxref=Genbank:NP_688945.1,GeneID:1014768;Name=NP_688945.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688945.1;transl_table=11
NC_004116.1	RefSeq	gene	1945802	1947985	.	-	.	ID=gene2057;Dbxref=GeneID:1014769;Name=SAG1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1959
NC_004116.1	RefSeq	CDS	1945802	1947985	.	-	0	ID=cds1911;Parent=gene2057;Dbxref=Genbank:NP_688946.1,GeneID:1014769;Name=NP_688946.1;Note=identified by match to PFAM protein family HMM PF00358;gbkey=CDS;product=PTS system transporter subunit IIABC;protein_id=NP_688946.1;transl_table=11
NC_004116.1	RefSeq	gene	1948143	1949798	.	-	.	ID=gene2058;Dbxref=GeneID:1014770;Name=SAG1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1960
NC_004116.1	RefSeq	CDS	1948143	1949798	.	-	0	ID=cds1912;Parent=gene2058;Dbxref=Genbank:NP_688947.1,GeneID:1014770;Name=NP_688947.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_688947.1;transl_table=11
NC_004116.1	RefSeq	gene	1949791	1950468	.	-	.	ID=gene2059;Dbxref=GeneID:1014771;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=SAG1961
NC_004116.1	RefSeq	CDS	1949791	1950468	.	-	0	ID=cds1913;Parent=gene2059;Dbxref=Genbank:NP_688948.1,GeneID:1014771;Name=NP_688948.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;gene=phoB;product=phosphate regulon response regulator PhoB;protein_id=NP_688948.1;transl_table=11
NC_004116.1	RefSeq	gene	1950468	1951124	.	-	.	ID=gene2060;Dbxref=GeneID:1014772;Name=SAG1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1962
NC_004116.1	RefSeq	CDS	1950468	1951124	.	-	0	ID=cds1914;Parent=gene2060;Dbxref=Genbank:NP_688949.1,GeneID:1014772;Name=NP_688949.1;Note=identified by match to PFAM protein family HMM PF01895;gbkey=CDS;product=phosphate transport system regulatory protein PhoU;protein_id=NP_688949.1;transl_table=11
NC_004116.1	RefSeq	gene	1951121	1951882	.	-	.	ID=gene2061;Dbxref=GeneID:1014773;Name=SAG1963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1963
NC_004116.1	RefSeq	CDS	1951121	1951882	.	-	0	ID=cds1915;Parent=gene2061;Dbxref=Genbank:NP_688950.1,GeneID:1014773;Name=NP_688950.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;product=phosphate transporter ATP-binding protein;protein_id=NP_688950.1;transl_table=11
NC_004116.1	RefSeq	gene	1951863	1952741	.	-	.	ID=gene2062;Dbxref=GeneID:1014774;Name=SAG1964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1964
NC_004116.1	RefSeq	CDS	1951863	1952741	.	-	0	ID=cds1916;Parent=gene2062;Dbxref=Genbank:NP_688951.1,GeneID:1014774;Name=NP_688951.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=NP_688951.1;transl_table=11
NC_004116.1	RefSeq	gene	1952743	1953588	.	-	.	ID=gene2063;Dbxref=GeneID:1014775;Name=SAG1965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1965
NC_004116.1	RefSeq	CDS	1952743	1953588	.	-	0	ID=cds1917;Parent=gene2063;Dbxref=Genbank:NP_688952.1,GeneID:1014775;Name=NP_688952.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=NP_688952.1;transl_table=11
NC_004116.1	RefSeq	gene	1953603	1954484	.	-	.	ID=gene2064;Dbxref=GeneID:1014776;Name=SAG1966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1966
NC_004116.1	RefSeq	CDS	1953603	1954484	.	-	0	ID=cds1918;Parent=gene2064;Dbxref=Genbank:NP_688953.1,GeneID:1014776;Name=NP_688953.1;gbkey=CDS;product=hemolysin;protein_id=NP_688953.1;transl_table=11
NC_004116.1	RefSeq	gene	1954685	1955272	.	-	.	ID=gene2065;Dbxref=GeneID:1014777;Name=SAG1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1967
NC_004116.1	RefSeq	CDS	1954685	1955272	.	-	0	ID=cds1919;Parent=gene2065;Dbxref=Genbank:NP_688954.1,GeneID:1014777;Name=NP_688954.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688954.1;transl_table=11
NC_004116.1	RefSeq	gene	1955269	1956009	.	-	.	ID=gene2066;Dbxref=GeneID:1014778;Name=SAG1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1968
NC_004116.1	RefSeq	CDS	1955269	1956009	.	-	0	ID=cds1920;Parent=gene2066;Dbxref=Genbank:NP_688955.1,GeneID:1014778;Name=NP_688955.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;product=16S ribosomal RNA methyltransferase RsmE;protein_id=NP_688955.1;transl_table=11
NC_004116.1	RefSeq	gene	1956009	1956962	.	-	.	ID=gene2067;Dbxref=GeneID:1014779;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=SAG1969
NC_004116.1	RefSeq	CDS	1956009	1956962	.	-	0	ID=cds1921;Parent=gene2067;Dbxref=Genbank:NP_688956.1,GeneID:1014779;Name=NP_688956.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=50S ribosomal protein L11 methyltransferase;protein_id=NP_688956.1;transl_table=11
NC_004116.1	RefSeq	gene	1956959	1957267	.	-	.	ID=gene2068;Dbxref=GeneID:1014780;Name=SAG1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1970
NC_004116.1	RefSeq	CDS	1956959	1957267	.	-	0	ID=cds1922;Parent=gene2068;Dbxref=Genbank:NP_688957.1,GeneID:1014780;Name=NP_688957.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688957.1;transl_table=11
NC_004116.1	RefSeq	gene	1957329	1957454	.	+	.	ID=gene2069;Dbxref=GeneID:1014781;Name=SAG1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1971
NC_004116.1	RefSeq	CDS	1957329	1957454	.	+	0	ID=cds1923;Parent=gene2069;Dbxref=Genbank:NP_688958.1,GeneID:1014781;Name=NP_688958.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688958.1;transl_table=11
NC_004116.1	RefSeq	gene	1957541	1958257	.	+	.	ID=gene2070;Dbxref=GeneID:1014782;Name=SAG1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1972
NC_004116.1	RefSeq	CDS	1957541	1958257	.	+	0	ID=cds1924;Parent=gene2070;Dbxref=Genbank:NP_688959.1,GeneID:1014782;Name=NP_688959.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=NP_688959.1;transl_table=11
NC_004116.1	RefSeq	gene	1958296	1958766	.	-	.	ID=gene2071;Dbxref=GeneID:1014783;Name=SAG1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1973
NC_004116.1	RefSeq	CDS	1958296	1958766	.	-	0	ID=cds1925;Parent=gene2071;Dbxref=Genbank:NP_688960.1,GeneID:1014783;Name=NP_688960.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688960.1;transl_table=11
NC_004116.1	RefSeq	gene	1958738	1959196	.	-	.	ID=gene2072;Dbxref=GeneID:1014784;Name=SAG1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1974
NC_004116.1	RefSeq	CDS	1958738	1959196	.	-	0	ID=cds1926;Parent=gene2072;Dbxref=Genbank:NP_688961.1,GeneID:1014784;Name=NP_688961.1;Note=identified by match to PFAM protein family HMM PF00293;gbkey=CDS;product=MutT/nudix family protein;protein_id=NP_688961.1;transl_table=11
NC_004116.1	RefSeq	gene	1959183	1959326	.	-	.	ID=gene2073;Dbxref=GeneID:1014785;Name=SAG1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1975
NC_004116.1	RefSeq	CDS	1959183	1959326	.	-	0	ID=cds1927;Parent=gene2073;Dbxref=Genbank:NP_688962.1,GeneID:1014785;Name=NP_688962.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688962.1;transl_table=11
NC_004116.1	RefSeq	gene	1959332	1959802	.	-	.	ID=gene2074;Dbxref=GeneID:1014786;Name=SAG1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1976
NC_004116.1	RefSeq	CDS	1959332	1959802	.	-	0	ID=cds1928;Parent=gene2074;Dbxref=Genbank:NP_688963.1,GeneID:1014786;Name=NP_688963.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688963.1;transl_table=11
NC_004116.1	RefSeq	gene	1960129	1960620	.	+	.	ID=gene2075;Dbxref=GeneID:1014787;Name=SAG1977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1977
NC_004116.1	RefSeq	CDS	1960129	1960620	.	+	0	ID=cds1929;Parent=gene2075;Dbxref=Genbank:NP_688964.1,GeneID:1014787;Name=NP_688964.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_688964.1;transl_table=11
NC_004116.1	RefSeq	gene	1960613	1961881	.	+	.	ID=gene2076;Dbxref=GeneID:1014788;Name=SAG1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1978
NC_004116.1	RefSeq	CDS	1960613	1961881	.	+	0	ID=cds1930;Parent=gene2076;Dbxref=Genbank:NP_688965.1,GeneID:1014788;Name=NP_688965.1;Note=identified by match to PFAM protein family HMM PF00004;gbkey=CDS;product=recombination factor protein RarA;protein_id=NP_688965.1;transl_table=11
NC_004116.1	RefSeq	gene	1962163	1962235	.	+	.	ID=gene2077;Dbxref=GeneID:1014789;Name=tRNA-Lys-1;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Lys-1
NC_004116.1	RefSeq	tRNA	1962163	1962235	.	+	.	ID=rna97;Parent=gene2077;Dbxref=GeneID:1014789;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	exon	1962163	1962235	.	+	.	ID=id100;Parent=rna97;Dbxref=GeneID:1014789;gbkey=tRNA;product=tRNA-Lys
NC_004116.1	RefSeq	gene	1962397	1963158	.	-	.	ID=gene2078;Dbxref=GeneID:1014790;Name=SAG1979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1979
NC_004116.1	RefSeq	CDS	1962397	1963158	.	-	0	ID=cds1931;Parent=gene2078;Dbxref=Genbank:NP_688966.1,GeneID:1014790;Name=NP_688966.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688966.1;transl_table=11
NC_004116.1	RefSeq	gene	1963155	1964057	.	-	.	ID=gene2079;Dbxref=GeneID:1014791;Name=SAG1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1980
NC_004116.1	RefSeq	CDS	1963155	1964057	.	-	0	ID=cds1932;Parent=gene2079;Dbxref=Genbank:NP_688967.1,GeneID:1014791;Name=NP_688967.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_688967.1;transl_table=11
NC_004116.1	RefSeq	gene	1964054	1964260	.	-	.	ID=gene2080;Dbxref=GeneID:1014792;Name=SAG1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1981
NC_004116.1	RefSeq	CDS	1964054	1964260	.	-	0	ID=cds1933;Parent=gene2080;Dbxref=Genbank:NP_688968.1,GeneID:1014792;Name=NP_688968.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688968.1;transl_table=11
NC_004116.1	RefSeq	gene	1964250	1965329	.	-	.	ID=gene2081;Dbxref=GeneID:1014793;Name=SAG1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1982
NC_004116.1	RefSeq	CDS	1964250	1965329	.	-	0	ID=cds1934;Parent=gene2081;Dbxref=Genbank:NP_688969.1,GeneID:1014793;Name=NP_688969.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_688969.1;transl_table=11
NC_004116.1	RefSeq	gene	1965710	1966027	.	+	.	ID=gene2082;Dbxref=GeneID:1014794;Name=SAG1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1983
NC_004116.1	RefSeq	CDS	1965710	1966027	.	+	0	ID=cds1935;Parent=gene2082;Dbxref=Genbank:NP_688970.1,GeneID:1014794;Name=NP_688970.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688970.1;transl_table=11
NC_004116.1	RefSeq	gene	1966024	1966590	.	+	.	ID=gene2083;Dbxref=GeneID:1014795;Name=SAG1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1984
NC_004116.1	RefSeq	CDS	1966024	1966590	.	+	0	ID=cds1936;Parent=gene2083;Dbxref=Genbank:NP_688971.1,GeneID:1014795;Name=NP_688971.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688971.1;transl_table=11
NC_004116.1	RefSeq	gene	1966644	1966799	.	-	.	ID=gene2084;Dbxref=GeneID:1014796;Name=SAG1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1985
NC_004116.1	RefSeq	CDS	1966644	1966799	.	-	0	ID=cds1937;Parent=gene2084;Dbxref=Genbank:NP_688972.1,GeneID:1014796;Name=NP_688972.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688972.1;transl_table=11
NC_004116.1	RefSeq	gene	1966825	1967952	.	-	.	ID=gene2085;Dbxref=GeneID:1014797;Name=SAG1986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1986
NC_004116.1	RefSeq	CDS	1966825	1967952	.	-	0	ID=cds1938;Parent=gene2085;Dbxref=Genbank:NP_688973.1,GeneID:1014797;Name=NP_688973.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=phage integrase family site specific recombinase;protein_id=NP_688973.1;transl_table=11
NC_004116.1	RefSeq	gene	1967956	1968141	.	-	.	ID=gene2086;Dbxref=GeneID:1014798;Name=SAG1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1987
NC_004116.1	RefSeq	CDS	1967956	1968141	.	-	0	ID=cds1939;Parent=gene2086;Dbxref=Genbank:NP_688974.1,GeneID:1014798;Name=NP_688974.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688974.1;transl_table=11
NC_004116.1	RefSeq	gene	1968202	1969230	.	-	.	ID=gene2087;Dbxref=GeneID:1014799;Name=SAG1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1988
NC_004116.1	RefSeq	CDS	1968202	1969230	.	-	0	ID=cds1940;Parent=gene2087;Dbxref=Genbank:NP_688975.1,GeneID:1014799;Name=NP_688975.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688975.1;transl_table=11
NC_004116.1	RefSeq	gene	1969233	1969652	.	-	.	ID=gene2088;Dbxref=GeneID:1014800;Name=SAG1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1989
NC_004116.1	RefSeq	CDS	1969233	1969652	.	-	0	ID=cds1941;Parent=gene2088;Dbxref=Genbank:NP_688976.1,GeneID:1014800;Name=NP_688976.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688976.1;transl_table=11
NC_004116.1	RefSeq	gene	1969978	1970361	.	-	.	ID=gene2089;Dbxref=GeneID:1014801;Name=SAG1990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1990
NC_004116.1	RefSeq	CDS	1969978	1970361	.	-	0	ID=cds1942;Parent=gene2089;Dbxref=Genbank:NP_688977.1,GeneID:1014801;Name=NP_688977.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688977.1;transl_table=11
NC_004116.1	RefSeq	gene	1970585	1971199	.	+	.	ID=gene2090;Dbxref=GeneID:1014802;Name=SAG1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1991
NC_004116.1	RefSeq	CDS	1970585	1971199	.	+	0	ID=cds1943;Parent=gene2090;Dbxref=Genbank:NP_688978.1,GeneID:1014802;Name=NP_688978.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_688978.1;transl_table=11
NC_004116.1	RefSeq	gene	1971372	1972928	.	-	.	ID=gene2091;Dbxref=GeneID:1014803;Name=SAG1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1992
NC_004116.1	RefSeq	CDS	1971372	1972928	.	-	0	ID=cds1944;Parent=gene2091;Dbxref=Genbank:NP_688979.1,GeneID:1014803;Name=NP_688979.1;Note=similar to PID:928833%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_688979.1;transl_table=11
NC_004116.1	RefSeq	gene	1973269	1974390	.	-	.	ID=gene2092;Dbxref=GeneID:1014804;Name=SAG1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1993
NC_004116.1	RefSeq	CDS	1973269	1974390	.	-	0	ID=cds1945;Parent=gene2092;Dbxref=Genbank:NP_688980.1,GeneID:1014804;Name=NP_688980.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=phage integrase family site specific recombinase;protein_id=NP_688980.1;transl_table=11
NC_004116.1	RefSeq	gene	1974440	1974766	.	-	.	ID=gene2093;Dbxref=GeneID:1014805;Name=SAG1994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1994
NC_004116.1	RefSeq	CDS	1974440	1974766	.	-	0	ID=cds1946;Parent=gene2093;Dbxref=Genbank:NP_688981.1,GeneID:1014805;Name=NP_688981.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688981.1;transl_table=11
NC_004116.1	RefSeq	gene	1974959	1975591	.	-	.	ID=gene2094;Dbxref=GeneID:1014806;Name=SAG1995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1995
NC_004116.1	RefSeq	CDS	1974959	1975591	.	-	0	ID=cds1947;Parent=gene2094;Dbxref=Genbank:NP_688982.1,GeneID:1014806;Name=NP_688982.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688982.1;transl_table=11
NC_004116.1	RefSeq	gene	1975672	1976463	.	-	.	ID=gene2095;Dbxref=GeneID:1014807;Name=SAG1996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1996
NC_004116.1	RefSeq	CDS	1975672	1976463	.	-	0	ID=cds1948;Parent=gene2095;Dbxref=Genbank:NP_688983.1,GeneID:1014807;Name=NP_688983.1;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_688983.1;transl_table=11
NC_004116.1	RefSeq	gene	1976480	1977028	.	-	.	ID=gene2096;Dbxref=GeneID:1014808;Name=SAG1997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1997
NC_004116.1	RefSeq	CDS	1976480	1977028	.	-	0	ID=cds1949;Parent=gene2096;Dbxref=Genbank:NP_688984.1,GeneID:1014808;Name=NP_688984.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688984.1;transl_table=11
NC_004116.1	RefSeq	gene	1977028	1978401	.	-	.	ID=gene2097;Dbxref=GeneID:1014809;Name=SAG1998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1998
NC_004116.1	RefSeq	CDS	1977028	1978401	.	-	0	ID=cds1950;Parent=gene2097;Dbxref=Genbank:NP_688985.1,GeneID:1014809;Name=NP_688985.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688985.1;transl_table=11
NC_004116.1	RefSeq	gene	1978564	1978707	.	+	.	ID=gene2098;Dbxref=GeneID:1014810;Name=SAG1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG1999
NC_004116.1	RefSeq	CDS	1978564	1978707	.	+	0	ID=cds1951;Parent=gene2098;Dbxref=Genbank:NP_688986.1,GeneID:1014810;Name=NP_688986.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688986.1;transl_table=11
NC_004116.1	RefSeq	gene	1978897	1980897	.	-	.	ID=gene2099;Dbxref=GeneID:1014811;Name=SAG2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2000
NC_004116.1	RefSeq	CDS	1978897	1980897	.	-	0	ID=cds1952;Parent=gene2099;Dbxref=Genbank:NP_688987.1,GeneID:1014811;Name=NP_688987.1;Note=similar to GP:6782407%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_688987.1;transl_table=11
NC_004116.1	RefSeq	gene	1980913	1983183	.	-	.	ID=gene2100;Dbxref=GeneID:1014812;Name=SAG2001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2001
NC_004116.1	RefSeq	CDS	1980913	1983183	.	-	0	ID=cds1953;Parent=gene2100;Dbxref=Genbank:NP_688988.1,GeneID:1014812;Name=NP_688988.1;Note=This gene is interrupted by an IS1381 element.;gbkey=CDS;product=conjugal transfer protein%2C interruption-C;protein_id=NP_688988.1;transl_table=11
NC_004116.1	RefSeq	gene	1983230	1983619	.	-	.	ID=gene2101;Dbxref=GeneID:1014813;Name=SAG2002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2002
NC_004116.1	RefSeq	CDS	1983230	1983619	.	-	0	ID=cds1954;Parent=gene2101;Dbxref=Genbank:NP_688989.1,GeneID:1014813;Name=NP_688989.1;Note=identified by match to PFAM protein family HMM PF01609;gbkey=CDS;product=IS1381 transposase protein B;protein_id=NP_688989.1;transl_table=11
NC_004116.1	RefSeq	gene	1983652	1984275	.	-	.	ID=gene2102;Dbxref=GeneID:1014814;Name=SAG2003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2003
NC_004116.1	RefSeq	CDS	1983652	1984275	.	-	0	ID=cds1955;Parent=gene2102;Dbxref=Genbank:NP_688990.2,GeneID:1014814;Name=NP_688990.2;Note=similar to OMNI:SP0537%3B identified by sequence similarity;gbkey=CDS;product=IS1381 transposase protein A;protein_id=NP_688990.2;transl_table=11
NC_004116.1	RefSeq	gene	1984071	1984275	.	-	.	ID=gene2103;Dbxref=GeneID:1014815;Name=SAG2004;Note=similar to GP:6782406%3B identified by sequence similarity%3B This gene is interrupted by an IS1381 element%3B conjugal transfer protein%2C interruption-N%2C degenerate;gbkey=Gene;gene_biotype=other;locus_tag=SAG2004
NC_004116.1	RefSeq	gene	1984296	1984706	.	-	.	ID=gene2104;Dbxref=GeneID:1014816;Name=SAG2005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2005
NC_004116.1	RefSeq	CDS	1984296	1984706	.	-	0	ID=cds1956;Parent=gene2104;Dbxref=Genbank:NP_688991.1,GeneID:1014816;Name=NP_688991.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688991.1;transl_table=11
NC_004116.1	RefSeq	gene	1984717	1984983	.	-	.	ID=gene2105;Dbxref=GeneID:1014817;Name=SAG2006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2006
NC_004116.1	RefSeq	CDS	1984717	1984983	.	-	0	ID=cds1957;Parent=gene2105;Dbxref=Genbank:NP_688992.1,GeneID:1014817;Name=NP_688992.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688992.1;transl_table=11
NC_004116.1	RefSeq	gene	1985004	1985957	.	-	.	ID=gene2106;Dbxref=GeneID:1014818;Name=SAG2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2007
NC_004116.1	RefSeq	CDS	1985004	1985957	.	-	0	ID=cds1958;Parent=gene2106;Dbxref=Genbank:NP_688993.1,GeneID:1014818;Name=NP_688993.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688993.1;transl_table=11
NC_004116.1	RefSeq	gene	1986010	1986264	.	-	.	ID=gene2107;Dbxref=GeneID:1014819;Name=SAG2008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2008
NC_004116.1	RefSeq	CDS	1986010	1986264	.	-	0	ID=cds1959;Parent=gene2107;Dbxref=Genbank:NP_688994.1,GeneID:1014819;Name=NP_688994.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688994.1;transl_table=11
NC_004116.1	RefSeq	gene	1986257	1986523	.	-	.	ID=gene2108;Dbxref=GeneID:1014820;Name=SAG2009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2009
NC_004116.1	RefSeq	CDS	1986257	1986523	.	-	0	ID=cds1960;Parent=gene2108;Dbxref=Genbank:NP_688995.1,GeneID:1014820;Name=NP_688995.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688995.1;transl_table=11
NC_004116.1	RefSeq	gene	1986668	1987141	.	-	.	ID=gene2109;Dbxref=GeneID:1014821;Name=SAG2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2010
NC_004116.1	RefSeq	CDS	1986668	1987141	.	-	0	ID=cds1961;Parent=gene2109;Dbxref=Genbank:NP_688996.1,GeneID:1014821;Name=NP_688996.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688996.1;transl_table=11
NC_004116.1	RefSeq	gene	1987149	1987631	.	-	.	ID=gene2110;Dbxref=GeneID:1014822;Name=SAG2011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2011
NC_004116.1	RefSeq	CDS	1987149	1987631	.	-	0	ID=cds1962;Parent=gene2110;Dbxref=Genbank:NP_688997.1,GeneID:1014822;Name=NP_688997.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688997.1;transl_table=11
NC_004116.1	RefSeq	gene	1987684	1987956	.	-	.	ID=gene2111;Dbxref=GeneID:1014823;Name=SAG2012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2012
NC_004116.1	RefSeq	CDS	1987684	1987956	.	-	0	ID=cds1963;Parent=gene2111;Dbxref=Genbank:NP_688998.1,GeneID:1014823;Name=NP_688998.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688998.1;transl_table=11
NC_004116.1	RefSeq	gene	1988091	1988660	.	-	.	ID=gene2112;Dbxref=GeneID:1014824;Name=SAG2013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2013
NC_004116.1	RefSeq	CDS	1988091	1988660	.	-	0	ID=cds1964;Parent=gene2112;Dbxref=Genbank:NP_688999.1,GeneID:1014824;Name=NP_688999.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_688999.1;transl_table=11
NC_004116.1	RefSeq	gene	1988663	1990012	.	-	.	ID=gene2113;Dbxref=GeneID:1014825;Name=SAG2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2014
NC_004116.1	RefSeq	CDS	1988663	1990012	.	-	0	ID=cds1965;Parent=gene2113;Dbxref=Genbank:NP_689000.1,GeneID:1014825;Name=NP_689000.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689000.1;transl_table=11
NC_004116.1	RefSeq	gene	1990209	1990508	.	-	.	ID=gene2114;Dbxref=GeneID:1014826;Name=SAG2015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2015
NC_004116.1	RefSeq	CDS	1990209	1990508	.	-	0	ID=cds1966;Parent=gene2114;Dbxref=Genbank:NP_689001.1,GeneID:1014826;Name=NP_689001.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_689001.1;transl_table=11
NC_004116.1	RefSeq	gene	1990492	1990869	.	-	.	ID=gene2115;Dbxref=GeneID:1014827;Name=SAG2016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2016
NC_004116.1	RefSeq	CDS	1990492	1990869	.	-	0	ID=cds1967;Parent=gene2115;Dbxref=Genbank:NP_689002.1,GeneID:1014827;Name=NP_689002.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689002.1;transl_table=11
NC_004116.1	RefSeq	gene	1990885	1992174	.	-	.	ID=gene2116;Dbxref=GeneID:1014828;Name=SAG2017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2017
NC_004116.1	RefSeq	CDS	1990885	1992174	.	-	0	ID=cds1968;Parent=gene2116;Dbxref=Genbank:NP_689003.1,GeneID:1014828;Name=NP_689003.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_689003.1;transl_table=11
NC_004116.1	RefSeq	gene	1992405	1994066	.	-	.	ID=gene2117;Dbxref=GeneID:1014829;Name=SAG2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2018
NC_004116.1	RefSeq	CDS	1992405	1994066	.	-	0	ID=cds1969;Parent=gene2117;Dbxref=Genbank:NP_689004.1,GeneID:1014829;Name=NP_689004.1;Note=identified by match to PFAM protein family HMM PF01580;gbkey=CDS;product=DNA translocase FtsK;protein_id=NP_689004.1;transl_table=11
NC_004116.1	RefSeq	gene	1994143	1994604	.	-	.	ID=gene2118;Dbxref=GeneID:1014830;Name=SAG2019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2019
NC_004116.1	RefSeq	CDS	1994143	1994604	.	-	0	ID=cds1970;Parent=gene2118;Dbxref=Genbank:NP_689005.1,GeneID:1014830;Name=NP_689005.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689005.1;transl_table=11
NC_004116.1	RefSeq	gene	1994626	1994922	.	-	.	ID=gene2119;Dbxref=GeneID:1014831;Name=SAG2020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2020
NC_004116.1	RefSeq	CDS	1994626	1994922	.	-	0	ID=cds1971;Parent=gene2119;Dbxref=Genbank:NP_689006.1,GeneID:1014831;Name=NP_689006.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689006.1;transl_table=11
NC_004116.1	RefSeq	gene	1994982	1997462	.	-	.	ID=gene2120;Dbxref=GeneID:1014832;Name=SAG2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2021
NC_004116.1	RefSeq	CDS	1994982	1997462	.	-	0	ID=cds1972;Parent=gene2120;Dbxref=Genbank:NP_689007.1,GeneID:1014832;Name=NP_689007.1;Note=identified by match to PFAM protein family HMM PF00746;gbkey=CDS;product=cell wall surface anchor family protein;protein_id=NP_689007.1;transl_table=11
NC_004116.1	RefSeq	gene	1997467	1998720	.	-	.	ID=gene2121;Dbxref=GeneID:1014833;Name=SAG2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2022
NC_004116.1	RefSeq	CDS	1997467	1998720	.	-	0	ID=cds1973;Parent=gene2121;Dbxref=Genbank:NP_689008.1,GeneID:1014833;Name=NP_689008.1;Note=identified by match to PFAM protein family HMM PF01610%3B This gene is located in a transposable element that also encodes two genes for a mercuric resistance operon%2C and there are two copies of the transposable element in this strain.;gbkey=CDS;product=ISL3 family transposase;protein_id=NP_689008.1;transl_table=11
NC_004116.1	RefSeq	gene	1998880	2000520	.	-	.	ID=gene2122;Dbxref=GeneID:1014834;Name=merA-2;gbkey=Gene;gene=merA-2;gene_biotype=protein_coding;locus_tag=SAG2023
NC_004116.1	RefSeq	CDS	1998880	2000520	.	-	0	ID=cds1974;Parent=gene2122;Dbxref=Genbank:NP_689009.1,GeneID:1014834;Name=NP_689009.1;Note=identified by match to PFAM protein family HMM PF00070;gbkey=CDS;gene=merA-2;product=mercuric reductase;protein_id=NP_689009.1;transl_table=11
NC_004116.1	RefSeq	gene	2000549	2000941	.	-	.	ID=gene2123;Dbxref=GeneID:1014835;Name=merR-2;gbkey=Gene;gene=merR-2;gene_biotype=protein_coding;locus_tag=SAG2024
NC_004116.1	RefSeq	CDS	2000549	2000941	.	-	0	ID=cds1975;Parent=gene2123;Dbxref=Genbank:NP_689010.1,GeneID:1014835;Name=NP_689010.1;Note=identified by match to PFAM protein family HMM PF00376;gbkey=CDS;gene=merR-2;product=mercuric resistance operon regulatory protein MerR;protein_id=NP_689010.1;transl_table=11
NC_004116.1	RefSeq	gene	2001647	2003215	.	+	.	ID=gene2124;Dbxref=GeneID:1014836;Name=SAG2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2025
NC_004116.1	RefSeq	CDS	2001647	2003215	.	+	0	ID=cds1976;Parent=gene2124;Dbxref=Genbank:NP_689011.1,GeneID:1014836;Name=NP_689011.1;Note=identified by match to PFAM protein family HMM PF01566;gbkey=CDS;product=Mn2+/Fe2+ transporter;protein_id=NP_689011.1;transl_table=11
NC_004116.1	RefSeq	gene	2003783	2004505	.	-	.	ID=gene2125;Dbxref=GeneID:1014837;Name=SAG2026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2026
NC_004116.1	RefSeq	CDS	2003783	2004505	.	-	0	ID=cds1977;Parent=gene2125;Dbxref=Genbank:NP_689012.1,GeneID:1014837;Name=NP_689012.1;Note=similar to OMNI:NTL01SA2412%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689012.1;transl_table=11
NC_004116.1	RefSeq	gene	2004509	2005126	.	-	.	ID=gene2126;Dbxref=GeneID:1014838;Name=SAG2027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2027
NC_004116.1	RefSeq	CDS	2004509	2005126	.	-	0	ID=cds1978;Parent=gene2126;Dbxref=Genbank:NP_689013.1,GeneID:1014838;Name=NP_689013.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_689013.1;transl_table=11
NC_004116.1	RefSeq	gene	2005184	2005294	.	-	.	ID=gene2127;Dbxref=GeneID:1014839;Name=SAG2028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2028
NC_004116.1	RefSeq	CDS	2005184	2005294	.	-	0	ID=cds1979;Parent=gene2127;Dbxref=Genbank:NP_689014.1,GeneID:1014839;Name=NP_689014.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689014.1;transl_table=11
NC_004116.1	RefSeq	gene	2005813	2006667	.	-	.	ID=gene2128;Dbxref=GeneID:1014840;Name=SAG2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2029
NC_004116.1	RefSeq	CDS	2005813	2006667	.	-	0	ID=cds1980;Parent=gene2128;Dbxref=Genbank:NP_689015.1,GeneID:1014840;Name=NP_689015.1;Note=similar to SP:P12055 GB:X06627 PID:46644%3B identified by sequence similarity;gbkey=CDS;product=streptomycin resistance protein;protein_id=NP_689015.1;transl_table=11
NC_004116.1	RefSeq	gene	2006846	2007238	.	-	.	ID=gene2129;Dbxref=GeneID:1014841;Name=SAG2030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2030
NC_004116.1	RefSeq	CDS	2006846	2007238	.	-	0	ID=cds1981;Parent=gene2129;Dbxref=Genbank:NP_689016.1,GeneID:1014841;Name=NP_689016.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689016.1;transl_table=11
NC_004116.1	RefSeq	gene	2007673	2008281	.	-	.	ID=gene2130;Dbxref=GeneID:1014842;Name=SAG2031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2031
NC_004116.1	RefSeq	CDS	2007673	2008281	.	-	0	ID=cds1982;Parent=gene2130;Dbxref=Genbank:NP_689017.1,GeneID:1014842;Name=NP_689017.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689017.1;transl_table=11
NC_004116.1	RefSeq	gene	2008268	2008603	.	-	.	ID=gene2131;Dbxref=GeneID:1014843;Name=SAG2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2032
NC_004116.1	RefSeq	CDS	2008268	2008603	.	-	0	ID=cds1983;Parent=gene2131;Dbxref=Genbank:NP_689018.1,GeneID:1014843;Name=NP_689018.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689018.1;transl_table=11
NC_004116.1	RefSeq	gene	2009125	2009613	.	-	.	ID=gene2132;Dbxref=GeneID:1014844;Name=SAG2033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2033
NC_004116.1	RefSeq	CDS	2009125	2009613	.	-	0	ID=cds1984;Parent=gene2132;Dbxref=Genbank:NP_689019.1,GeneID:1014844;Name=NP_689019.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_689019.1;transl_table=11
NC_004116.1	RefSeq	gene	2009782	2010525	.	-	.	ID=gene2133;Dbxref=GeneID:1014845;Name=SAG2034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2034
NC_004116.1	RefSeq	CDS	2009782	2010525	.	-	0	ID=cds1985;Parent=gene2133;Dbxref=Genbank:NP_689020.1,GeneID:1014845;Name=NP_689020.1;Note=similar to OMNI:NTL01BH0292%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689020.1;transl_table=11
NC_004116.1	RefSeq	gene	2010540	2011442	.	-	.	ID=gene2134;Dbxref=GeneID:1014846;Name=SAG2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2035
NC_004116.1	RefSeq	CDS	2010540	2011442	.	-	0	ID=cds1986;Parent=gene2134;Dbxref=Genbank:NP_689021.1,GeneID:1014846;Name=NP_689021.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_689021.1;transl_table=11
NC_004116.1	RefSeq	gene	2011439	2011645	.	-	.	ID=gene2135;Dbxref=GeneID:1014847;Name=SAG2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2036
NC_004116.1	RefSeq	CDS	2011439	2011645	.	-	0	ID=cds1987;Parent=gene2135;Dbxref=Genbank:NP_689022.1,GeneID:1014847;Name=NP_689022.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689022.1;transl_table=11
NC_004116.1	RefSeq	gene	2011647	2012723	.	-	.	ID=gene2136;Dbxref=GeneID:1014848;Name=SAG2037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2037
NC_004116.1	RefSeq	CDS	2011647	2012723	.	-	0	ID=cds1988;Parent=gene2136;Dbxref=Genbank:NP_689023.1,GeneID:1014848;Name=NP_689023.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_689023.1;transl_table=11
NC_004116.1	RefSeq	gene	2012972	2013586	.	-	.	ID=gene2137;Dbxref=GeneID:1014849;Name=SAG2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2038
NC_004116.1	RefSeq	CDS	2012972	2013586	.	-	0	ID=cds1989;Parent=gene2137;Dbxref=Genbank:NP_689024.1,GeneID:1014849;Name=NP_689024.1;Note=identified by match to PFAM protein family HMM PF01569;gbkey=CDS;product=PAP2 family protein;protein_id=NP_689024.1;transl_table=11
NC_004116.1	RefSeq	gene	2013800	2014096	.	+	.	ID=gene2138;Dbxref=GeneID:1014850;Name=SAG2039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2039
NC_004116.1	RefSeq	CDS	2013800	2014096	.	+	0	ID=cds1990;Parent=gene2138;Dbxref=Genbank:NP_689025.1,GeneID:1014850;Name=NP_689025.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689025.1;transl_table=11
NC_004116.1	RefSeq	gene	2014113	2014673	.	+	.	ID=gene2139;Dbxref=GeneID:1014851;Name=SAG2040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2040
NC_004116.1	RefSeq	CDS	2014113	2014673	.	+	0	ID=cds1991;Parent=gene2139;Dbxref=Genbank:NP_689026.1,GeneID:1014851;Name=NP_689026.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689026.1;transl_table=11
NC_004116.1	RefSeq	gene	2014978	2015841	.	+	.	ID=gene2140;Dbxref=GeneID:1014852;Name=SAG2041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2041
NC_004116.1	RefSeq	CDS	2014978	2015841	.	+	0	ID=cds1992;Parent=gene2140;Dbxref=Genbank:NP_689027.1,GeneID:1014852;Name=NP_689027.1;Note=identified by match to PFAM protein family HMM PF02517;gbkey=CDS;product=protease;protein_id=NP_689027.1;transl_table=11
NC_004116.1	RefSeq	gene	2015998	2016300	.	-	.	ID=gene2141;Dbxref=GeneID:1014853;Name=SAG2042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2042
NC_004116.1	RefSeq	CDS	2015998	2016300	.	-	0	ID=cds1993;Parent=gene2141;Dbxref=Genbank:NP_689028.1,GeneID:1014853;Name=NP_689028.1;Note=identified by match to PFAM protein family HMM PF00581;gbkey=CDS;product=rhodanese-like domain-containing protein;protein_id=NP_689028.1;transl_table=11
NC_004116.1	RefSeq	gene	2016473	2017240	.	-	.	ID=gene2142;Dbxref=GeneID:1014854;Name=cfb;gbkey=Gene;gene=cfb;gene_biotype=protein_coding;locus_tag=SAG2043
NC_004116.1	RefSeq	CDS	2016473	2017240	.	-	0	ID=cds1994;Parent=gene2142;Dbxref=Genbank:NP_689029.1,GeneID:1014854;Name=NP_689029.1;Note=similar to SP:P09879%3B identified by sequence similarity;gbkey=CDS;gene=cfb;product=cAMP factor;protein_id=NP_689029.1;transl_table=11
NC_004116.1	RefSeq	gene	2017460	2017648	.	-	.	ID=gene2143;Dbxref=GeneID:1014855;Name=SAG2044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2044
NC_004116.1	RefSeq	CDS	2017460	2017648	.	-	0	ID=cds1995;Parent=gene2143;Dbxref=Genbank:NP_689030.1,GeneID:1014855;Name=NP_689030.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689030.1;transl_table=11
NC_004116.1	RefSeq	gene	2018009	2018548	.	+	.	ID=gene2144;Dbxref=GeneID:1014856;Name=SAG2045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2045
NC_004116.1	RefSeq	CDS	2018009	2018548	.	+	0	ID=cds1996;Parent=gene2144;Dbxref=Genbank:NP_689031.1,GeneID:1014856;Name=NP_689031.1;gbkey=CDS;product=topology modulation protein;protein_id=NP_689031.1;transl_table=11
NC_004116.1	RefSeq	gene	2018749	2019834	.	+	.	ID=gene2145;Dbxref=GeneID:1014857;Name=SAG2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2046
NC_004116.1	RefSeq	CDS	2018749	2019834	.	+	0	ID=cds1997;Parent=gene2145;Dbxref=Genbank:NP_689032.1,GeneID:1014857;Name=NP_689032.1;Note=identified by match to PFAM protein family HMM PF00465;gbkey=CDS;product=glycerol dehydrogenase;protein_id=NP_689032.1;transl_table=11
NC_004116.1	RefSeq	gene	2019999	2020706	.	-	.	ID=gene2146;Dbxref=GeneID:1014858;Name=SAG2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2047
NC_004116.1	RefSeq	CDS	2019999	2020706	.	-	0	ID=cds1998;Parent=gene2146;Dbxref=Genbank:NP_689033.1,GeneID:1014858;Name=NP_689033.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689033.1;transl_table=11
NC_004116.1	RefSeq	gene	2021053	2022897	.	-	.	ID=gene2147;Dbxref=GeneID:1014859;Name=SAG2048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2048
NC_004116.1	RefSeq	CDS	2021053	2022897	.	-	0	ID=cds1999;Parent=gene2147;Dbxref=Genbank:NP_689034.1,GeneID:1014859;Name=NP_689034.1;Note=catalyzes the formation of 5%2C10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine%3B expressed in B. subtilis under methionine starvation conditions;gbkey=CDS;product=bifunctional homocysteine S-methyltransferase/5%2C10-methylenetetrahydrofolate reductase;protein_id=NP_689034.1;transl_table=11
NC_004116.1	RefSeq	gene	2022942	2025179	.	-	.	ID=gene2148;Dbxref=GeneID:1014860;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=SAG2049
NC_004116.1	RefSeq	CDS	2022942	2025179	.	-	0	ID=cds2000;Parent=gene2148;Dbxref=Genbank:NP_689035.1,GeneID:1014860;Name=NP_689035.1;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=NP_689035.1;transl_table=11
NC_004116.1	RefSeq	gene	2025549	2025872	.	-	.	ID=gene2149;Dbxref=GeneID:1014861;Name=SAG2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2050
NC_004116.1	RefSeq	CDS	2025549	2025872	.	-	0	ID=cds2001;Parent=gene2149;Dbxref=Genbank:NP_689036.1,GeneID:1014861;Name=NP_689036.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689036.1;transl_table=11
NC_004116.1	RefSeq	gene	2025862	2026554	.	-	.	ID=gene2150;Dbxref=GeneID:1014862;Name=SAG2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2051
NC_004116.1	RefSeq	CDS	2025862	2026554	.	-	0	ID=cds2002;Parent=gene2150;Dbxref=Genbank:NP_689037.1,GeneID:1014862;Name=NP_689037.1;gbkey=CDS;product=branched-chain amino acid transport protein AzlC;protein_id=NP_689037.1;transl_table=11
NC_004116.1	RefSeq	gene	2026789	2026914	.	+	.	ID=gene2151;Dbxref=GeneID:1014863;Name=SAG2052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2052
NC_004116.1	RefSeq	CDS	2026789	2026914	.	+	0	ID=cds2003;Parent=gene2151;Dbxref=Genbank:NP_689038.1,GeneID:1014863;Name=NP_689038.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689038.1;transl_table=11
NC_004116.1	RefSeq	gene	2026877	2031589	.	+	.	ID=gene2152;Dbxref=GeneID:1014864;Name=SAG2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2053
NC_004116.1	RefSeq	CDS	2026877	2031589	.	+	0	ID=cds2004;Parent=gene2152;Dbxref=Genbank:NP_689039.1,GeneID:1014864;Name=NP_689039.1;Note=identified by match to PFAM protein family HMM PF00082;gbkey=CDS;product=serine protease;protein_id=NP_689039.1;transl_table=11
NC_004116.1	RefSeq	gene	2031822	2032508	.	+	.	ID=gene2153;Dbxref=GeneID:1014865;Name=SAG2054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2054
NC_004116.1	RefSeq	CDS	2031822	2032508	.	+	0	ID=cds2005;Parent=gene2153;Dbxref=Genbank:NP_689040.1,GeneID:1014865;Name=NP_689040.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_689040.1;transl_table=11
NC_004116.1	RefSeq	gene	2032505	2033893	.	+	.	ID=gene2154;Dbxref=GeneID:1014866;Name=SAG2055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2055
NC_004116.1	RefSeq	CDS	2032505	2033893	.	+	0	ID=cds2006;Parent=gene2154;Dbxref=Genbank:NP_689041.1,GeneID:1014866;Name=NP_689041.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_689041.1;transl_table=11
NC_004116.1	RefSeq	gene	2033986	2034594	.	+	.	ID=gene2155;Dbxref=GeneID:1014867;Name=SAG2056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2056
NC_004116.1	RefSeq	CDS	2033986	2034594	.	+	0	ID=cds2007;Parent=gene2155;Dbxref=Genbank:NP_689042.1,GeneID:1014867;Name=NP_689042.1;Note=similar to OMNI:EF0852%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689042.1;transl_table=11
NC_004116.1	RefSeq	gene	2034681	2037182	.	-	.	ID=gene2156;Dbxref=GeneID:1014868;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SAG2057
NC_004116.1	RefSeq	CDS	2034681	2037182	.	-	0	ID=cds2008;Parent=gene2156;Dbxref=Genbank:NP_689043.1,GeneID:1014868;Name=NP_689043.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=NP_689043.1;transl_table=11
NC_004116.1	RefSeq	gene	2037559	2038806	.	+	.	ID=gene2157;Dbxref=GeneID:1014869;Name=SAG2058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2058
NC_004116.1	RefSeq	CDS	2037559	2038806	.	+	0	ID=cds2009;Parent=gene2157;Dbxref=Genbank:NP_689044.1,GeneID:1014869;Name=NP_689044.1;Note=identified by match to PFAM protein family HMM PF00083;gbkey=CDS;product=major facilitator family protein;protein_id=NP_689044.1;transl_table=11
NC_004116.1	RefSeq	gene	2038849	2039694	.	-	.	ID=gene2158;Dbxref=GeneID:1014870;Name=SAG2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2059
NC_004116.1	RefSeq	CDS	2038849	2039694	.	-	0	ID=cds2010;Parent=gene2158;Dbxref=Genbank:NP_689045.1,GeneID:1014870;Name=NP_689045.1;Note=identified by match to PFAM protein family HMM PF01734%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_689045.1;transl_table=11
NC_004116.1	RefSeq	gene	2039899	2041095	.	+	.	ID=gene2159;Dbxref=GeneID:1014871;Name=SAG2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2060
NC_004116.1	RefSeq	CDS	2039899	2041095	.	+	0	ID=cds2011;Parent=gene2159;Dbxref=Genbank:NP_689046.1,GeneID:1014871;Name=NP_689046.1;Note=identified by match to PFAM protein family HMM PF01501;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_689046.1;transl_table=11
NC_004116.1	RefSeq	gene	2041160	2042365	.	+	.	ID=gene2160;Dbxref=GeneID:1014872;Name=SAG2061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2061
NC_004116.1	RefSeq	CDS	2041160	2042365	.	+	0	ID=cds2012;Parent=gene2160;Dbxref=Genbank:NP_689047.1,GeneID:1014872;Name=NP_689047.1;Note=identified by match to PFAM protein family HMM PF01501;gbkey=CDS;product=glycosyl transferase family protein;protein_id=NP_689047.1;transl_table=11
NC_004116.1	RefSeq	gene	2042412	2042951	.	-	.	ID=gene2161;Dbxref=GeneID:1014873;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SAG2062
NC_004116.1	RefSeq	CDS	2042412	2042951	.	-	0	ID=cds2013;Parent=gene2161;Dbxref=Genbank:NP_689048.1,GeneID:1014873;Name=NP_689048.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription antitermination protein NusG;protein_id=NP_689048.1;transl_table=11
NC_004116.1	RefSeq	gene	2043157	2045049	.	-	.	ID=gene2162;Dbxref=GeneID:1014874;Name=SAG2063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2063
NC_004116.1	RefSeq	CDS	2043157	2045049	.	-	0	ID=cds2014;Parent=gene2162;Dbxref=Genbank:NP_689049.1,GeneID:1014874;Name=NP_689049.1;Note=identified by match to PFAM protein family HMM PF00746;gbkey=CDS;product=pathogenicity protein;protein_id=NP_689049.1;transl_table=11
NC_004116.1	RefSeq	gene	2045361	2045534	.	-	.	ID=gene2163;Dbxref=GeneID:1014875;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SAG2064
NC_004116.1	RefSeq	CDS	2045361	2045534	.	-	0	ID=cds2015;Parent=gene2163;Dbxref=Genbank:NP_689050.1,GeneID:1014875;Name=NP_689050.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=NP_689050.1;transl_table=11
NC_004116.1	RefSeq	gene	2045570	2045722	.	-	.	ID=gene2164;Dbxref=GeneID:1014876;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SAG2065
NC_004116.1	RefSeq	CDS	2045570	2045722	.	-	0	ID=cds2016;Parent=gene2164;Dbxref=Genbank:NP_689051.1,GeneID:1014876;Name=NP_689051.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group have the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=NP_689051.1;transl_table=11
NC_004116.1	RefSeq	gene	2045771	2048092	.	-	.	ID=gene2165;Dbxref=GeneID:1014877;Name=pbp2A;gbkey=Gene;gene=pbp2A;gene_biotype=protein_coding;locus_tag=SAG2066
NC_004116.1	RefSeq	CDS	2045771	2048092	.	-	0	ID=cds2017;Parent=gene2165;Dbxref=Genbank:NP_689052.1,GeneID:1014877;Name=NP_689052.1;Note=identified by match to PFAM protein family HMM PF00905;gbkey=CDS;gene=pbp2A;product=penicillin-binding protein 2A;protein_id=NP_689052.1;transl_table=11
NC_004116.1	RefSeq	gene	2048136	2049020	.	+	.	ID=gene2166;Dbxref=GeneID:1014878;Name=SAG2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2067
NC_004116.1	RefSeq	CDS	2048136	2049020	.	+	0	ID=cds2018;Parent=gene2166;Dbxref=Genbank:NP_689053.1,GeneID:1014878;Name=NP_689053.1;Note=identified by match to PFAM protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=NP_689053.1;transl_table=11
NC_004116.1	RefSeq	gene	2049045	2050685	.	-	.	ID=gene2167;Dbxref=GeneID:1014879;Name=SAG2068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2068
NC_004116.1	RefSeq	CDS	2049045	2050685	.	-	0	ID=cds2019;Parent=gene2167;Dbxref=Genbank:NP_689054.1,GeneID:1014879;Name=NP_689054.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689054.1;transl_table=11
NC_004116.1	RefSeq	gene	2050855	2052066	.	-	.	ID=gene2168;Dbxref=GeneID:1014880;Name=deoB-2;gbkey=Gene;gene=deoB-2;gene_biotype=protein_coding;locus_tag=SAG2069
NC_004116.1	RefSeq	CDS	2050855	2052066	.	-	0	ID=cds2020;Parent=gene2168;Dbxref=Genbank:NP_689055.1,GeneID:1014880;Name=NP_689055.1;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;gbkey=CDS;gene=deoB-2;product=phosphopentomutase;protein_id=NP_689055.1;transl_table=11
NC_004116.1	RefSeq	gene	2052133	2052804	.	-	.	ID=gene2169;Dbxref=GeneID:1014881;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=SAG2070
NC_004116.1	RefSeq	CDS	2052133	2052804	.	-	0	ID=cds2021;Parent=gene2169;Dbxref=Genbank:NP_689056.1,GeneID:1014881;Name=NP_689056.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=NP_689056.1;transl_table=11
NC_004116.1	RefSeq	gene	2052834	2054036	.	-	.	ID=gene2170;Dbxref=GeneID:1014882;Name=SAG2071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2071
NC_004116.1	RefSeq	CDS	2052834	2054036	.	-	0	ID=cds2022;Parent=gene2170;Dbxref=Genbank:NP_689057.1,GeneID:1014882;Name=NP_689057.1;Note=identified by match to PFAM protein family HMM PF01773;gbkey=CDS;product=Na+ dependent nucleoside transporter;protein_id=NP_689057.1;transl_table=11
NC_004116.1	RefSeq	gene	2054057	2054836	.	-	.	ID=gene2171;Dbxref=GeneID:1014883;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=SAG2072
NC_004116.1	RefSeq	CDS	2054057	2054836	.	-	0	ID=cds2023;Parent=gene2171;Dbxref=Genbank:NP_689058.1,GeneID:1014883;Name=NP_689058.1;Note=identified by match to PFAM protein family HMM PF01048;gbkey=CDS;gene=udp;product=uridine phosphorylase;protein_id=NP_689058.1;transl_table=11
NC_004116.1	RefSeq	gene	2054994	2055731	.	+	.	ID=gene2172;Dbxref=GeneID:1014884;Name=SAG2073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2073
NC_004116.1	RefSeq	CDS	2054994	2055731	.	+	0	ID=cds2024;Parent=gene2172;Dbxref=Genbank:NP_689059.1,GeneID:1014884;Name=NP_689059.1;Note=identified by match to PFAM protein family HMM PF00392;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=NP_689059.1;transl_table=11
NC_004116.1	RefSeq	gene	2055744	2056040	.	+	.	ID=gene2173;Dbxref=GeneID:17097511;Name=SAG_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG_RS02460
NC_004116.1	RefSeq	CDS	2055744	2056040	.	+	0	ID=cds2025;Parent=gene2173;Dbxref=Genbank:YP_008592388.1,GeneID:17097511;Name=YP_008592388.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_008592388.1;transl_table=11
NC_004116.1	RefSeq	gene	2056140	2057762	.	-	.	ID=gene2174;Dbxref=GeneID:1014885;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=SAG2074
NC_004116.1	RefSeq	CDS	2056140	2057762	.	-	0	ID=cds2026;Parent=gene2174;Dbxref=Genbank:NP_689060.1,GeneID:1014885;Name=NP_689060.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=NP_689060.1;transl_table=11
NC_004116.1	RefSeq	gene	2057858	2058142	.	-	.	ID=gene2175;Dbxref=GeneID:1014886;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SAG2075
NC_004116.1	RefSeq	CDS	2057858	2058142	.	-	0	ID=cds2027;Parent=gene2175;Dbxref=Genbank:NP_689061.1,GeneID:1014886;Name=NP_689061.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP-binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=co-chaperonin GroES;protein_id=NP_689061.1;transl_table=11
NC_004116.1	RefSeq	gene	2058317	2059120	.	-	.	ID=gene2176;Dbxref=GeneID:1014887;Name=SAG2076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2076
NC_004116.1	RefSeq	CDS	2058317	2059120	.	-	0	ID=cds2028;Parent=gene2176;Dbxref=Genbank:NP_689062.1,GeneID:1014887;Name=NP_689062.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_689062.1;transl_table=11
NC_004116.1	RefSeq	gene	2059125	2060021	.	-	.	ID=gene2177;Dbxref=GeneID:1014888;Name=SAG2077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2077
NC_004116.1	RefSeq	CDS	2059125	2060021	.	-	0	ID=cds2029;Parent=gene2177;Dbxref=Genbank:NP_689063.1,GeneID:1014888;Name=NP_689063.1;Note=identified by match to PFAM protein family HMM PF02653;gbkey=CDS;product=ABC transporter permease;protein_id=NP_689063.1;transl_table=11
NC_004116.1	RefSeq	gene	2060037	2060999	.	-	.	ID=gene2178;Dbxref=GeneID:1014889;Name=SAG2078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2078
NC_004116.1	RefSeq	CDS	2060037	2060999	.	-	0	ID=cds2030;Parent=gene2178;Dbxref=Genbank:NP_689064.1,GeneID:1014889;Name=NP_689064.1;Note=similar to OMNI:SP1069%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_689064.1;transl_table=11
NC_004116.1	RefSeq	gene	2061464	2062261	.	-	.	ID=gene2179;Dbxref=GeneID:1014890;Name=SAG2079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2079
NC_004116.1	RefSeq	CDS	2061464	2062261	.	-	0	ID=cds2031;Parent=gene2179;Dbxref=Genbank:NP_689065.1,GeneID:1014890;Name=NP_689065.1;Note=identified by match to PFAM protein family HMM PF00702;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=NP_689065.1;transl_table=11
NC_004116.1	RefSeq	gene	2062447	2063307	.	+	.	ID=gene2180;Dbxref=GeneID:1014891;Name=SAG2080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2080
NC_004116.1	RefSeq	CDS	2062447	2063307	.	+	0	ID=cds2032;Parent=gene2180;Dbxref=Genbank:NP_689066.1,GeneID:1014891;Name=NP_689066.1;Note=identified by match to PFAM protein family HMM PF00903;gbkey=CDS;product=glyoxylase;protein_id=NP_689066.1;transl_table=11
NC_004116.1	RefSeq	gene	2063350	2064081	.	+	.	ID=gene2181;Dbxref=GeneID:1014892;Name=SAG2081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2081
NC_004116.1	RefSeq	CDS	2063350	2064081	.	+	0	ID=cds2033;Parent=gene2181;Dbxref=Genbank:NP_689067.1,GeneID:1014892;Name=NP_689067.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689067.1;transl_table=11
NC_004116.1	RefSeq	gene	2064438	2065055	.	-	.	ID=gene2182;Dbxref=GeneID:1014893;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=SAG2082
NC_004116.1	RefSeq	CDS	2064438	2065055	.	-	0	ID=cds2034;Parent=gene2182;Dbxref=Genbank:NP_689068.1,GeneID:1014893;Name=NP_689068.1;Note=identified by match to PFAM protein family HMM PF02143;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=NP_689068.1;transl_table=11
NC_004116.1	RefSeq	gene	2065128	2065619	.	-	.	ID=gene2183;Dbxref=GeneID:1014894;Name=SAG2083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2083
NC_004116.1	RefSeq	CDS	2065128	2065619	.	-	0	ID=cds2035;Parent=gene2183;Dbxref=Genbank:NP_689069.1,GeneID:1014894;Name=NP_689069.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_689069.1;transl_table=11
NC_004116.1	RefSeq	gene	2065628	2066560	.	-	.	ID=gene2184;Dbxref=GeneID:1014895;Name=SAG2084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2084
NC_004116.1	RefSeq	CDS	2065628	2066560	.	-	0	ID=cds2036;Parent=gene2184;Dbxref=Genbank:NP_689070.1,GeneID:1014895;Name=NP_689070.1;Note=identified by match to PFAM protein family HMM PF01408;gbkey=CDS;product=virulence factor MviM;protein_id=NP_689070.1;transl_table=11
NC_004116.1	RefSeq	gene	2066573	2066716	.	-	.	ID=gene2185;Dbxref=GeneID:1014896;Name=SAG2085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2085
NC_004116.1	RefSeq	CDS	2066573	2066716	.	-	0	ID=cds2037;Parent=gene2185;Dbxref=Genbank:NP_689071.1,GeneID:1014896;Name=NP_689071.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689071.1;transl_table=11
NC_004116.1	RefSeq	gene	2066791	2068962	.	-	.	ID=gene2186;Dbxref=GeneID:1014897;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=SAG2086
NC_004116.1	RefSeq	CDS	2066791	2068962	.	-	0	ID=cds2038;Parent=gene2186;Dbxref=Genbank:NP_689072.1,GeneID:1014897;Name=NP_689072.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside triphosphate reductase;protein_id=NP_689072.1;transl_table=11
NC_004116.1	RefSeq	gene	2069088	2070575	.	-	.	ID=gene2187;Dbxref=GeneID:1014898;Name=SAG2087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2087
NC_004116.1	RefSeq	CDS	2069088	2070575	.	-	0	ID=cds2039;Parent=gene2187;Dbxref=Genbank:NP_689073.1,GeneID:1014898;Name=NP_689073.1;Note=similar to OMNI:NTL01SPL1648%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689073.1;transl_table=11
NC_004116.1	RefSeq	gene	2070675	2070797	.	-	.	ID=gene2188;Dbxref=GeneID:1014899;Name=SAG2088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2088
NC_004116.1	RefSeq	CDS	2070675	2070797	.	-	0	ID=cds2040;Parent=gene2188;Dbxref=Genbank:NP_689074.1,GeneID:1014899;Name=NP_689074.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689074.1;transl_table=11
NC_004116.1	RefSeq	gene	2070879	2071196	.	-	.	ID=gene2189;Dbxref=GeneID:1014900;Name=SAG2089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2089
NC_004116.1	RefSeq	CDS	2070879	2071196	.	-	0	ID=cds2041;Parent=gene2189;Dbxref=Genbank:NP_689075.1,GeneID:1014900;Name=NP_689075.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689075.1;transl_table=11
NC_004116.1	RefSeq	gene	2071222	2071632	.	-	.	ID=gene2190;Dbxref=GeneID:1014901;Name=SAG2090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2090
NC_004116.1	RefSeq	CDS	2071222	2071632	.	-	0	ID=cds2042;Parent=gene2190;Dbxref=Genbank:NP_689076.1,GeneID:1014901;Name=NP_689076.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction resolvase-like protein;protein_id=NP_689076.1;transl_table=11
NC_004116.1	RefSeq	gene	2071641	2071907	.	-	.	ID=gene2191;Dbxref=GeneID:1014902;Name=SAG2091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2091
NC_004116.1	RefSeq	CDS	2071641	2071907	.	-	0	ID=cds2043;Parent=gene2191;Dbxref=Genbank:NP_689077.1,GeneID:1014902;Name=NP_689077.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689077.1;transl_table=11
NC_004116.1	RefSeq	gene	2072109	2072507	.	-	.	ID=gene2192;Dbxref=GeneID:1014903;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;gene_synonym=yjbD;locus_tag=SAG2092
NC_004116.1	RefSeq	CDS	2072109	2072507	.	-	0	ID=cds2044;Parent=gene2192;Dbxref=Genbank:NP_689078.1,GeneID:1014903;Name=NP_689078.1;Note=the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters%3B in Bacillus subtilis this protein is a substrate for ClpXP protease%3B blocks transcription of the competence regulatory gene encoded by the srf operon%3B regulates a number of genes involved in thiol homeostasis including trxA and trxB%3B monomeric member of ArsC family of proteins%3B does not bind DNA%3B contains a disulfide bond between C10 and C13 which may sense disulfide stress;gbkey=CDS;gene=spxA;product=Spx family transcriptional regulator;protein_id=NP_689078.1;transl_table=11
NC_004116.1	RefSeq	gene	2072723	2073862	.	-	.	ID=gene2193;Dbxref=GeneID:1014904;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SAG2093
NC_004116.1	RefSeq	CDS	2072723	2073862	.	-	0	ID=cds2045;Parent=gene2193;Dbxref=Genbank:NP_689079.1,GeneID:1014904;Name=NP_689079.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=recombinase A;protein_id=NP_689079.1;transl_table=11
NC_004116.1	RefSeq	gene	2073936	2075196	.	-	.	ID=gene2194;Dbxref=GeneID:1014905;Name=cinA;Note=This region contains an authentic frame shift and is not the result of a sequencing artifact%3B similar to OMNI:SP1941%3B identified by sequence similarity%3B competence/damage-inducible protein CinA%2C authentic frameshift;gbkey=Gene;gene=cinA;gene_biotype=other;locus_tag=SAG2094
NC_004116.1	RefSeq	gene	2075285	2075836	.	-	.	ID=gene2195;Dbxref=GeneID:1014906;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=SAG2095
NC_004116.1	RefSeq	CDS	2075285	2075836	.	-	0	ID=cds2046;Parent=gene2195;Dbxref=Genbank:NP_689080.1,GeneID:1014906;Name=NP_689080.1;Note=identified by match to PFAM protein family HMM PF03352;gbkey=CDS;gene=tag;product=DNA-3-methyladenine glycosylase I;protein_id=NP_689080.1;transl_table=11
NC_004116.1	RefSeq	gene	2075859	2076449	.	-	.	ID=gene2196;Dbxref=GeneID:1014907;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=SAG2096
NC_004116.1	RefSeq	CDS	2075859	2076449	.	-	0	ID=cds2047;Parent=gene2196;Dbxref=Genbank:NP_689081.1,GeneID:1014907;Name=NP_689081.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=NP_689081.1;transl_table=11
NC_004116.1	RefSeq	gene	2076451	2077707	.	-	.	ID=gene2197;Dbxref=GeneID:1014908;Name=SAG2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2097
NC_004116.1	RefSeq	CDS	2076451	2077707	.	-	0	ID=cds2048;Parent=gene2197;Dbxref=Genbank:NP_689082.1,GeneID:1014908;Name=NP_689082.1;gbkey=CDS;product=transporter;protein_id=NP_689082.1;transl_table=11
NC_004116.1	RefSeq	gene	2077715	2079694	.	-	.	ID=gene2198;Dbxref=GeneID:1014909;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=SAG2098
NC_004116.1	RefSeq	CDS	2077715	2079694	.	-	0	ID=cds2049;Parent=gene2198;Dbxref=Genbank:NP_689083.1,GeneID:1014909;Name=NP_689083.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;product=DNA mismatch repair protein;protein_id=NP_689083.1;transl_table=11
NC_004116.1	RefSeq	gene	2079819	2079920	.	-	.	ID=gene2199;Dbxref=GeneID:1014910;Name=SAG2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2099
NC_004116.1	RefSeq	CDS	2079819	2079920	.	-	0	ID=cds2050;Parent=gene2199;Dbxref=Genbank:NP_689084.1,GeneID:1014910;Name=NP_689084.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689084.1;transl_table=11
NC_004116.1	RefSeq	gene	2079914	2080117	.	+	.	ID=gene2200;Dbxref=GeneID:1014911;Name=SAG2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2100
NC_004116.1	RefSeq	CDS	2079914	2080117	.	+	0	ID=cds2051;Parent=gene2200;Dbxref=Genbank:NP_689085.1,GeneID:1014911;Name=NP_689085.1;Note=identified by match to PFAM protein family HMM PF00313;gbkey=CDS;product=CSD family cold shock protein;protein_id=NP_689085.1;transl_table=11
NC_004116.1	RefSeq	gene	2080174	2082750	.	-	.	ID=gene2201;Dbxref=GeneID:1014912;Name=hexA;gbkey=Gene;gene=hexA;gene_biotype=protein_coding;locus_tag=SAG2101
NC_004116.1	RefSeq	CDS	2080174	2082750	.	-	0	ID=cds2052;Parent=gene2201;Dbxref=Genbank:NP_689086.1,GeneID:1014912;Name=NP_689086.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;gene=hexA;product=DNA mismatch repair protein MutS;protein_id=NP_689086.1;transl_table=11
NC_004116.1	RefSeq	gene	2082807	2083244	.	-	.	ID=gene2202;Dbxref=GeneID:1014913;Name=SAG2102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2102
NC_004116.1	RefSeq	CDS	2082807	2083244	.	-	0	ID=cds2053;Parent=gene2202;Dbxref=Genbank:NP_689087.1,GeneID:1014913;Name=NP_689087.1;Note=identified by match to PFAM protein family HMM PF01316;gbkey=CDS;product=arginine repressor ArgR;protein_id=NP_689087.1;transl_table=11
NC_004116.1	RefSeq	gene	2083466	2085157	.	+	.	ID=gene2203;Dbxref=GeneID:1014914;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=SAG2103
NC_004116.1	RefSeq	CDS	2083466	2085157	.	+	0	ID=cds2054;Parent=gene2203;Dbxref=Genbank:NP_689088.1,GeneID:1014914;Name=NP_689088.1;Note=catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=NP_689088.1;transl_table=11
NC_004116.1	RefSeq	gene	2085245	2085553	.	+	.	ID=gene2204;Dbxref=GeneID:1014915;Name=SAG2104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2104
NC_004116.1	RefSeq	CDS	2085245	2085553	.	+	0	ID=cds2055;Parent=gene2204;Dbxref=Genbank:NP_689089.1,GeneID:1014915;Name=NP_689089.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689089.1;transl_table=11
NC_004116.1	RefSeq	gene	2085580	2086452	.	-	.	ID=gene2205;Dbxref=GeneID:1014916;Name=SAG2105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2105
NC_004116.1	RefSeq	CDS	2085580	2086452	.	-	0	ID=cds2056;Parent=gene2205;Dbxref=Genbank:NP_689090.1,GeneID:1014916;Name=NP_689090.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689090.1;transl_table=11
NC_004116.1	RefSeq	gene	2086560	2087504	.	-	.	ID=gene2206;Dbxref=GeneID:1014917;Name=SAG2106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2106
NC_004116.1	RefSeq	CDS	2086560	2087504	.	-	0	ID=cds2057;Parent=gene2206;Dbxref=Genbank:NP_689091.1,GeneID:1014917;Name=NP_689091.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689091.1;transl_table=11
NC_004116.1	RefSeq	gene	2087494	2089245	.	-	.	ID=gene2207;Dbxref=GeneID:1014918;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=SAG2107
NC_004116.1	RefSeq	CDS	2087494	2089245	.	-	0	ID=cds2058;Parent=gene2207;Dbxref=Genbank:NP_689092.1,GeneID:1014918;Name=NP_689092.1;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=NP_689092.1;transl_table=11
NC_004116.1	RefSeq	gene	2089338	2090618	.	-	.	ID=gene2208;Dbxref=GeneID:1014919;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SAG2108
NC_004116.1	RefSeq	CDS	2089338	2090618	.	-	0	ID=cds2059;Parent=gene2208;Dbxref=Genbank:NP_689093.1,GeneID:1014919;Name=NP_689093.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=NP_689093.1;transl_table=11
NC_004116.1	RefSeq	gene	2090838	2091020	.	+	.	ID=gene2209;Dbxref=GeneID:1014920;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SAG2109
NC_004116.1	RefSeq	CDS	2090838	2091020	.	+	0	ID=cds2060;Parent=gene2209;Dbxref=Genbank:NP_689094.1,GeneID:1014920;Name=NP_689094.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=NP_689094.1;transl_table=11
NC_004116.1	RefSeq	gene	2091036	2091185	.	+	.	ID=gene2210;Dbxref=GeneID:1014921;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SAG2110
NC_004116.1	RefSeq	CDS	2091036	2091185	.	+	0	ID=cds2061;Parent=gene2210;Dbxref=Genbank:NP_689095.1,GeneID:1014921;Name=NP_689095.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=NP_689095.1;transl_table=11
NC_004116.1	RefSeq	gene	2091333	2091854	.	-	.	ID=gene2211;Dbxref=GeneID:1014922;Name=SAG2111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2111
NC_004116.1	RefSeq	CDS	2091333	2091854	.	-	0	ID=cds2062;Parent=gene2211;Dbxref=Genbank:NP_689096.1,GeneID:1014922;Name=NP_689096.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689096.1;transl_table=11
NC_004116.1	RefSeq	gene	2091952	2093436	.	-	.	ID=gene2212;Dbxref=GeneID:1014923;Name=SAG2112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2112
NC_004116.1	RefSeq	CDS	2091952	2093436	.	-	0	ID=cds2063;Parent=gene2212;Dbxref=Genbank:NP_689097.1,GeneID:1014923;Name=NP_689097.1;Note=identified by match to PFAM protein family HMM PF00589;gbkey=CDS;product=phage integrase family site specific recombinase;protein_id=NP_689097.1;transl_table=11
NC_004116.1	RefSeq	gene	2093446	2093694	.	-	.	ID=gene2213;Dbxref=GeneID:1014924;Name=SAG2113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2113
NC_004116.1	RefSeq	CDS	2093446	2093694	.	-	0	ID=cds2064;Parent=gene2213;Dbxref=Genbank:NP_689098.1,GeneID:1014924;Name=NP_689098.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689098.1;transl_table=11
NC_004116.1	RefSeq	gene	2093760	2094788	.	-	.	ID=gene2214;Dbxref=GeneID:1014925;Name=SAG2114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2114
NC_004116.1	RefSeq	CDS	2093760	2094788	.	-	0	ID=cds2065;Parent=gene2214;Dbxref=Genbank:NP_689099.1,GeneID:1014925;Name=NP_689099.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689099.1;transl_table=11
NC_004116.1	RefSeq	gene	2094791	2095222	.	-	.	ID=gene2215;Dbxref=GeneID:1014926;Name=SAG2115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2115
NC_004116.1	RefSeq	CDS	2094791	2095222	.	-	0	ID=cds2066;Parent=gene2215;Dbxref=Genbank:NP_689100.1,GeneID:1014926;Name=NP_689100.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689100.1;transl_table=11
NC_004116.1	RefSeq	gene	2095498	2095953	.	-	.	ID=gene2216;Dbxref=GeneID:1014927;Name=SAG2116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2116
NC_004116.1	RefSeq	CDS	2095498	2095953	.	-	0	ID=cds2067;Parent=gene2216;Dbxref=Genbank:NP_689101.1,GeneID:1014927;Name=NP_689101.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689101.1;transl_table=11
NC_004116.1	RefSeq	gene	2095953	2096168	.	-	.	ID=gene2217;Dbxref=GeneID:1014928;Name=SAG2117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2117
NC_004116.1	RefSeq	CDS	2095953	2096168	.	-	0	ID=cds2068;Parent=gene2217;Dbxref=Genbank:NP_689102.1,GeneID:1014928;Name=NP_689102.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689102.1;transl_table=11
NC_004116.1	RefSeq	gene	2096491	2097411	.	+	.	ID=gene2218;Dbxref=GeneID:1014929;Name=SAG2118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2118
NC_004116.1	RefSeq	CDS	2096491	2097411	.	+	0	ID=cds2069;Parent=gene2218;Dbxref=Genbank:NP_689103.1,GeneID:1014929;Name=NP_689103.1;Note=identified by match to PFAM protein family HMM PF01381%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_689103.1;transl_table=11
NC_004116.1	RefSeq	gene	2097432	2098553	.	+	.	ID=gene2219;Dbxref=GeneID:1014930;Name=SAG2119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2119
NC_004116.1	RefSeq	CDS	2097432	2098553	.	+	0	ID=cds2070;Parent=gene2219;Dbxref=Genbank:NP_689104.1,GeneID:1014930;Name=NP_689104.1;Note=similar to GP:15161770%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689104.1;transl_table=11
NC_004116.1	RefSeq	gene	2098781	2099590	.	+	.	ID=gene2220;Dbxref=GeneID:1014931;Name=SAG2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2120
NC_004116.1	RefSeq	CDS	2098781	2099590	.	+	0	ID=cds2071;Parent=gene2220;Dbxref=Genbank:NP_689105.1,GeneID:1014931;Name=NP_689105.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689105.1;transl_table=11
NC_004116.1	RefSeq	gene	2100041	2100712	.	+	.	ID=gene2221;Dbxref=GeneID:1014932;Name=SAG2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2121
NC_004116.1	RefSeq	CDS	2100041	2100712	.	+	0	ID=cds2072;Parent=gene2221;Dbxref=Genbank:NP_689106.1,GeneID:1014932;Name=NP_689106.1;Note=identified by Glimmer2%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_689106.1;transl_table=11
NC_004116.1	RefSeq	gene	2100797	2101468	.	+	.	ID=gene2222;Dbxref=GeneID:1014933;Name=SAG2122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2122
NC_004116.1	RefSeq	CDS	2100797	2101468	.	+	0	ID=cds2073;Parent=gene2222;Dbxref=Genbank:NP_689107.1,GeneID:1014933;Name=NP_689107.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=DNA-binding response regulator;protein_id=NP_689107.1;transl_table=11
NC_004116.1	RefSeq	gene	2101452	2102816	.	+	.	ID=gene2223;Dbxref=GeneID:1014934;Name=SAG2123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2123
NC_004116.1	RefSeq	CDS	2101452	2102816	.	+	0	ID=cds2074;Parent=gene2223;Dbxref=Genbank:NP_689108.1,GeneID:1014934;Name=NP_689108.1;Note=identified by match to PFAM protein family HMM PF00512;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_689108.1;transl_table=11
NC_004116.1	RefSeq	gene	2102926	2104479	.	-	.	ID=gene2224;Dbxref=GeneID:1014935;Name=SAG2124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2124
NC_004116.1	RefSeq	CDS	2102926	2104479	.	-	0	ID=cds2075;Parent=gene2224;Dbxref=Genbank:NP_689109.1,GeneID:1014935;Name=NP_689109.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689109.1;transl_table=11
NC_004116.1	RefSeq	gene	2104573	2105499	.	-	.	ID=gene2225;Dbxref=GeneID:1014936;Name=arcC-1;gbkey=Gene;gene=arcC-1;gene_biotype=protein_coding;locus_tag=SAG2125
NC_004116.1	RefSeq	CDS	2104573	2105499	.	-	0	ID=cds2076;Parent=gene2225;Dbxref=Genbank:NP_689110.1,GeneID:1014936;Name=NP_689110.1;Note=catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;gene=arcC-1;product=carbamate kinase;protein_id=NP_689110.1;transl_table=11
NC_004116.1	RefSeq	gene	2105511	2106509	.	-	.	ID=gene2226;Dbxref=GeneID:1014937;Name=argF-1;gbkey=Gene;gene=argF-1;gene_biotype=protein_coding;locus_tag=SAG2126
NC_004116.1	RefSeq	CDS	2105511	2106509	.	-	0	ID=cds2077;Parent=gene2226;Dbxref=Genbank:NP_689111.1,GeneID:1014937;Name=NP_689111.1;Note=catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation;gbkey=CDS;gene=argF-1;product=ornithine carbamoyltransferase;protein_id=NP_689111.1;transl_table=11
NC_004116.1	RefSeq	gene	2106612	2107907	.	+	.	ID=gene2227;Dbxref=GeneID:1014938;Name=SAG2127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2127
NC_004116.1	RefSeq	CDS	2106612	2107907	.	+	0	ID=cds2078;Parent=gene2227;Dbxref=Genbank:NP_689112.1,GeneID:1014938;Name=NP_689112.1;Note=identified by match to PFAM protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase;protein_id=NP_689112.1;transl_table=11
NC_004116.1	RefSeq	gene	2107904	2108737	.	+	.	ID=gene2228;Dbxref=GeneID:1014939;Name=SAG2128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2128
NC_004116.1	RefSeq	CDS	2107904	2108737	.	+	0	ID=cds2079;Parent=gene2228;Dbxref=Genbank:NP_689113.1,GeneID:1014939;Name=NP_689113.1;Note=identified by match to PFAM protein family HMM PF00072;gbkey=CDS;product=response regulator;protein_id=NP_689113.1;transl_table=11
NC_004116.1	RefSeq	gene	2108959	2109681	.	+	.	ID=gene2229;Dbxref=GeneID:1014940;Name=SAG2129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2129
NC_004116.1	RefSeq	CDS	2108959	2109681	.	+	0	ID=cds2080;Parent=gene2229;Dbxref=Genbank:NP_689114.1,GeneID:1014940;Name=NP_689114.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=NP_689114.1;transl_table=11
NC_004116.1	RefSeq	gene	2109684	2111198	.	+	.	ID=gene2230;Dbxref=GeneID:1014941;Name=SAG2130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2130
NC_004116.1	RefSeq	CDS	2109684	2111198	.	+	0	ID=cds2081;Parent=gene2230;Dbxref=Genbank:NP_689115.1,GeneID:1014941;Name=NP_689115.1;Note=identified by match to PFAM protein family HMM PF00528;gbkey=CDS;product=amino acid ABC transporter amino acid-binding protein/permease;protein_id=NP_689115.1;transl_table=11
NC_004116.1	RefSeq	gene	2111277	2113820	.	-	.	ID=gene2231;Dbxref=GeneID:1014942;Name=SAG2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2131
NC_004116.1	RefSeq	CDS	2111277	2113820	.	-	0	ID=cds2082;Parent=gene2231;Dbxref=Genbank:NP_689116.1,GeneID:1014942;Name=NP_689116.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689116.1;transl_table=11
NC_004116.1	RefSeq	gene	2113801	2114544	.	-	.	ID=gene2232;Dbxref=GeneID:1014943;Name=SAG2132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2132
NC_004116.1	RefSeq	CDS	2113801	2114544	.	-	0	ID=cds2083;Parent=gene2232;Dbxref=Genbank:NP_689117.1,GeneID:1014943;Name=NP_689117.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689117.1;transl_table=11
NC_004116.1	RefSeq	gene	2114678	2115034	.	-	.	ID=gene2233;Dbxref=GeneID:1014944;Name=SAG2133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2133
NC_004116.1	RefSeq	CDS	2114678	2115034	.	-	0	ID=cds2084;Parent=gene2233;Dbxref=Genbank:NP_689118.1,GeneID:1014944;Name=NP_689118.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689118.1;transl_table=11
NC_004116.1	RefSeq	gene	2115101	2117419	.	-	.	ID=gene2234;Dbxref=GeneID:1014945;Name=SAG2134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2134
NC_004116.1	RefSeq	CDS	2115101	2117419	.	-	0	ID=cds2085;Parent=gene2234;Dbxref=Genbank:NP_689119.1,GeneID:1014945;Name=NP_689119.1;Note=similar to OMNI:NTL01SPL1699%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689119.1;transl_table=11
NC_004116.1	RefSeq	gene	2117558	2118097	.	+	.	ID=gene2235;Dbxref=GeneID:1014946;Name=SAG2135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2135
NC_004116.1	RefSeq	CDS	2117558	2118097	.	+	0	ID=cds2086;Parent=gene2235;Dbxref=Genbank:NP_689120.1,GeneID:1014946;Name=NP_689120.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=NP_689120.1;transl_table=11
NC_004116.1	RefSeq	gene	2118183	2118479	.	-	.	ID=gene2236;Dbxref=GeneID:1014947;Name=SAG2136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2136
NC_004116.1	RefSeq	CDS	2118183	2118479	.	-	0	ID=cds2087;Parent=gene2236;Dbxref=Genbank:NP_689121.1,GeneID:1014947;Name=NP_689121.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689121.1;transl_table=11
NC_004116.1	RefSeq	gene	2118723	2119334	.	-	.	ID=gene2237;Dbxref=GeneID:1014948;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=SAG2137
NC_004116.1	RefSeq	CDS	2118723	2119334	.	-	0	ID=cds2088;Parent=gene2237;Dbxref=Genbank:NP_689122.1,GeneID:1014948;Name=NP_689122.1;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=NP_689122.1;transl_table=11
NC_004116.1	RefSeq	gene	2119664	2119951	.	-	.	ID=gene2238;Dbxref=GeneID:1014949;Name=SAG2138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2138
NC_004116.1	RefSeq	CDS	2119664	2119951	.	-	0	ID=cds2089;Parent=gene2238;Dbxref=Genbank:NP_689123.1,GeneID:1014949;Name=NP_689123.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689123.1;transl_table=11
NC_004116.1	RefSeq	gene	2119963	2121318	.	-	.	ID=gene2239;Dbxref=GeneID:1014950;Name=dnaC-2;gbkey=Gene;gene=dnaC-2;gene_biotype=protein_coding;locus_tag=SAG2139
NC_004116.1	RefSeq	CDS	2119963	2121318	.	-	0	ID=cds2090;Parent=gene2239;Dbxref=Genbank:NP_689124.1,GeneID:1014950;Name=NP_689124.1;Note=unwinds double stranded DNA;gbkey=CDS;gene=dnaC-2;product=replicative DNA helicase;protein_id=NP_689124.1;transl_table=11
NC_004116.1	RefSeq	gene	2121361	2121813	.	-	.	ID=gene2240;Dbxref=GeneID:1014951;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SAG2140
NC_004116.1	RefSeq	CDS	2121361	2121813	.	-	0	ID=cds2091;Parent=gene2240;Dbxref=Genbank:NP_689125.1,GeneID:1014951;Name=NP_689125.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=NP_689125.1;transl_table=11
NC_004116.1	RefSeq	gene	2121819	2123801	.	-	.	ID=gene2241;Dbxref=GeneID:1014952;Name=SAG2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2141
NC_004116.1	RefSeq	CDS	2121819	2123801	.	-	0	ID=cds2092;Parent=gene2241;Dbxref=Genbank:NP_689126.1,GeneID:1014952;Name=NP_689126.1;Note=identified by match to PFAM protein family HMM PF01368%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=DHH family protein;protein_id=NP_689126.1;transl_table=11
NC_004116.1	RefSeq	gene	2123868	2125709	.	-	.	ID=gene2242;Dbxref=GeneID:1014953;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=SAG2142
NC_004116.1	RefSeq	CDS	2123868	2125709	.	-	0	ID=cds2093;Parent=gene2242;Dbxref=Genbank:NP_689127.1,GeneID:1014953;Name=NP_689127.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification protein GidA;protein_id=NP_689127.1;transl_table=11
NC_004116.1	RefSeq	gene	2125938	2126549	.	-	.	ID=gene2243;Dbxref=GeneID:1014954;Name=SAG2143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2143
NC_004116.1	RefSeq	CDS	2125938	2126549	.	-	0	ID=cds2094;Parent=gene2243;Dbxref=Genbank:NP_689128.1,GeneID:1014954;Name=NP_689128.1;Note=identified by match to PFAM protein family HMM PF01914;gbkey=CDS;product=hypothetical protein;protein_id=NP_689128.1;transl_table=11
NC_004116.1	RefSeq	gene	2126581	2127702	.	-	.	ID=gene2244;Dbxref=GeneID:1014955;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=SAG2144
NC_004116.1	RefSeq	CDS	2126581	2127702	.	-	0	ID=cds2095;Parent=gene2244;Dbxref=Genbank:NP_689129.1,GeneID:1014955;Name=NP_689129.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=NP_689129.1;transl_table=11
NC_004116.1	RefSeq	gene	2127948	2128616	.	+	.	ID=gene2245;Dbxref=GeneID:1014956;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=SAG2145
NC_004116.1	RefSeq	CDS	2127948	2128616	.	+	0	ID=cds2096;Parent=gene2245;Dbxref=Genbank:NP_689130.1,GeneID:1014956;Name=NP_689130.1;Note=identified by match to PFAM protein family HMM PF01842;gbkey=CDS;gene=sdhB;product=L-serine dehydratase%2C iron-sulfur-dependent subunit beta;protein_id=NP_689130.1;transl_table=11
NC_004116.1	RefSeq	gene	2128631	2129503	.	+	.	ID=gene2246;Dbxref=GeneID:1014957;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=SAG2146
NC_004116.1	RefSeq	CDS	2128631	2129503	.	+	0	ID=cds2097;Parent=gene2246;Dbxref=Genbank:NP_689131.1,GeneID:1014957;Name=NP_689131.1;Note=identified by match to PFAM protein family HMM PF03313;gbkey=CDS;gene=sdhA;product=L-serine dehydratase%2C iron-sulfur-dependent subunit alpha;protein_id=NP_689131.1;transl_table=11
NC_004116.1	RefSeq	gene	2129638	2130342	.	-	.	ID=gene2247;Dbxref=GeneID:1014958;Name=SAG2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2147
NC_004116.1	RefSeq	CDS	2129638	2130342	.	-	0	ID=cds2098;Parent=gene2247;Dbxref=Genbank:NP_689132.1,GeneID:1014958;Name=NP_689132.1;Note=similar to OMNI:NTL01SPL1712%3B identified by sequence similarity%3B The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002.;gbkey=CDS;product=hypothetical protein;protein_id=NP_689132.1;transl_table=11
NC_004116.1	RefSeq	gene	2130448	2130987	.	-	.	ID=gene2248;Dbxref=GeneID:1014959;Name=SAG2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2148
NC_004116.1	RefSeq	CDS	2130448	2130987	.	-	0	ID=cds2099;Parent=gene2248;Dbxref=Genbank:NP_689133.1,GeneID:1014959;Name=NP_689133.1;Note=identified by match to PFAM protein family HMM PF01476;gbkey=CDS;product=LysM domain-containing protein;protein_id=NP_689133.1;transl_table=11
NC_004116.1	RefSeq	gene	2131203	2131997	.	-	.	ID=gene2249;Dbxref=GeneID:1014960;Name=SAG2149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2149
NC_004116.1	RefSeq	CDS	2131203	2131997	.	-	0	ID=cds2100;Parent=gene2249;Dbxref=Genbank:NP_689134.1,GeneID:1014960;Name=NP_689134.1;Note=identified by match to PFAM protein family HMM PF02361;gbkey=CDS;product=cobalt transport family protein;protein_id=NP_689134.1;transl_table=11
NC_004116.1	RefSeq	gene	2131990	2132832	.	-	.	ID=gene2250;Dbxref=GeneID:1014961;Name=cbiO;gbkey=Gene;gene=cbiO;gene_biotype=protein_coding;locus_tag=SAG2150
NC_004116.1	RefSeq	CDS	2131990	2132832	.	-	0	ID=cds2101;Parent=gene2250;Dbxref=Genbank:NP_689135.1,GeneID:1014961;Name=NP_689135.1;Note=with CbiNQ forms the ABC transporter for cobalt import%3B Streptococcus has two adjacent copies of this gene;gbkey=CDS;gene=cbiO;product=cobalt transporter ATP-binding subunit;protein_id=NP_689135.1;transl_table=11
NC_004116.1	RefSeq	gene	2132808	2133647	.	-	.	ID=gene2251;Dbxref=GeneID:1014962;Name=cbiO;gbkey=Gene;gene=cbiO;gene_biotype=protein_coding;locus_tag=SAG2151
NC_004116.1	RefSeq	CDS	2132808	2133647	.	-	0	ID=cds2102;Parent=gene2251;Dbxref=Genbank:NP_689136.1,GeneID:1014962;Name=NP_689136.1;Note=with CbiNQ forms the ABC transporter for cobalt import%3B Streptococcus has two adjacent copies of this gene;gbkey=CDS;gene=cbiO;product=cobalt transporter ATP-binding subunit;protein_id=NP_689136.1;transl_table=11
NC_004116.1	RefSeq	gene	2133647	2134189	.	-	.	ID=gene2252;Dbxref=GeneID:1014963;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=SAG2152
NC_004116.1	RefSeq	CDS	2133647	2134189	.	-	0	ID=cds2103;Parent=gene2252;Dbxref=Genbank:NP_689137.1,GeneID:1014963;Name=NP_689137.1;Note=identified by match to PFAM protein family HMM PF01066;gbkey=CDS;gene=pgsA;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=NP_689137.1;transl_table=11
NC_004116.1	RefSeq	gene	2134312	2135595	.	-	.	ID=gene2253;Dbxref=GeneID:1014964;Name=SAG2153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2153
NC_004116.1	RefSeq	CDS	2134312	2135595	.	-	0	ID=cds2104;Parent=gene2253;Dbxref=Genbank:NP_689138.1,GeneID:1014964;Name=NP_689138.1;Note=identified by match to PFAM protein family HMM PF00675;gbkey=CDS;product=M16 family peptidase;protein_id=NP_689138.1;transl_table=11
NC_004116.1	RefSeq	gene	2135597	2136841	.	-	.	ID=gene2254;Dbxref=GeneID:1014965;Name=SAG2154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2154
NC_004116.1	RefSeq	CDS	2135597	2136841	.	-	0	ID=cds2105;Parent=gene2254;Dbxref=Genbank:NP_689139.1,GeneID:1014965;Name=NP_689139.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689139.1;transl_table=11
NC_004116.1	RefSeq	gene	2137080	2137433	.	+	.	ID=gene2255;Dbxref=GeneID:1014966;Name=SAG2155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2155
NC_004116.1	RefSeq	CDS	2137080	2137433	.	+	0	ID=cds2106;Parent=gene2255;Dbxref=Genbank:NP_689140.1,GeneID:1014966;Name=NP_689140.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689140.1;transl_table=11
NC_004116.1	RefSeq	gene	2137436	2138545	.	+	.	ID=gene2256;Dbxref=GeneID:1014967;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SAG2156
NC_004116.1	RefSeq	CDS	2137436	2138545	.	+	0	ID=cds2107;Parent=gene2256;Dbxref=Genbank:NP_689141.1,GeneID:1014967;Name=NP_689141.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=recombination protein F;protein_id=NP_689141.1;transl_table=11
NC_004116.1	RefSeq	gene	2138557	2139393	.	-	.	ID=gene2257;Dbxref=GeneID:1014968;Name=SAG2157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2157
NC_004116.1	RefSeq	CDS	2138557	2139393	.	-	0	ID=cds2108;Parent=gene2257;Dbxref=Genbank:NP_689142.1,GeneID:1014968;Name=NP_689142.1;Note=identified by match to PFAM protein family HMM PF00892;gbkey=CDS;product=transporter;protein_id=NP_689142.1;transl_table=11
NC_004116.1	RefSeq	gene	2139479	2140141	.	-	.	ID=gene2258;Dbxref=GeneID:1014969;Name=SAG2158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2158
NC_004116.1	RefSeq	CDS	2139479	2140141	.	-	0	ID=cds2109;Parent=gene2258;Dbxref=Genbank:NP_689143.1,GeneID:1014969;Name=NP_689143.1;Note=identified by match to PFAM protein family HMM PF01381;gbkey=CDS;product=Cro/CI family transcriptional regulator;protein_id=NP_689143.1;transl_table=11
NC_004116.1	RefSeq	gene	2140216	2141697	.	-	.	ID=gene2259;Dbxref=GeneID:1014970;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=SAG2159
NC_004116.1	RefSeq	CDS	2140216	2141697	.	-	0	ID=cds2110;Parent=gene2259;Dbxref=Genbank:NP_689144.1,GeneID:1014970;Name=NP_689144.1;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate;gbkey=CDS;gene=guaB;product=inosine 5'-monophosphate dehydrogenase;protein_id=NP_689144.1;transl_table=11
NC_004116.1	RefSeq	gene	2141854	2142339	.	-	.	ID=gene2260;Dbxref=GeneID:1014971;Name=SAG2160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2160
NC_004116.1	RefSeq	CDS	2141854	2142339	.	-	0	ID=cds2111;Parent=gene2260;Dbxref=Genbank:NP_689145.1,GeneID:1014971;Name=NP_689145.1;Note=identified by match to PFAM protein family HMM PF02863;gbkey=CDS;product=ArgR family transcriptional regulator;protein_id=NP_689145.1;transl_table=11
NC_004116.1	RefSeq	gene	2142349	2143029	.	-	.	ID=gene2261;Dbxref=GeneID:1014972;Name=SAG2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2161
NC_004116.1	RefSeq	CDS	2142349	2143029	.	-	0	ID=cds2112;Parent=gene2261;Dbxref=Genbank:NP_689146.1,GeneID:1014972;Name=NP_689146.1;Note=identified by match to PFAM protein family HMM PF00027;gbkey=CDS;product=Crp/Fnr family transcriptional regulator;protein_id=NP_689146.1;transl_table=11
NC_004116.1	RefSeq	gene	2143237	2143941	.	+	.	ID=gene2262;Dbxref=GeneID:1014973;Name=SAG2162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2162
NC_004116.1	RefSeq	CDS	2143237	2143941	.	+	0	ID=cds2113;Parent=gene2262;Dbxref=Genbank:NP_689147.1,GeneID:1014973;Name=NP_689147.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689147.1;transl_table=11
NC_004116.1	RefSeq	gene	2144208	2145440	.	+	.	ID=gene2263;Dbxref=GeneID:1014974;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=SAG2163
NC_004116.1	RefSeq	CDS	2144208	2145440	.	+	0	ID=cds2114;Parent=gene2263;Dbxref=Genbank:NP_689148.1,GeneID:1014974;Name=NP_689148.1;Note=catalyzes the degradation of arginine to citruline and ammonia;gbkey=CDS;gene=arcA;product=arginine deiminase;protein_id=NP_689148.1;transl_table=11
NC_004116.1	RefSeq	gene	2145467	2145877	.	+	.	ID=gene2264;Dbxref=GeneID:1014975;Name=SAG2164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2164
NC_004116.1	RefSeq	CDS	2145467	2145877	.	+	0	ID=cds2115;Parent=gene2264;Dbxref=Genbank:NP_689149.1,GeneID:1014975;Name=NP_689149.1;Note=identified by match to PFAM protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=NP_689149.1;transl_table=11
NC_004116.1	RefSeq	gene	2145893	2146906	.	+	.	ID=gene2265;Dbxref=GeneID:1014976;Name=argF-2;gbkey=Gene;gene=argF-2;gene_biotype=protein_coding;locus_tag=SAG2165
NC_004116.1	RefSeq	CDS	2145893	2146906	.	+	0	ID=cds2116;Parent=gene2265;Dbxref=Genbank:NP_689150.1,GeneID:1014976;Name=NP_689150.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;gene=argF-2;product=ornithine carbamoyltransferase;protein_id=NP_689150.1;transl_table=11
NC_004116.1	RefSeq	gene	2146969	2148396	.	+	.	ID=gene2266;Dbxref=GeneID:1014977;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=SAG2166
NC_004116.1	RefSeq	CDS	2146969	2148396	.	+	0	ID=cds2117;Parent=gene2266;Dbxref=Genbank:NP_689151.1,GeneID:1014977;Name=NP_689151.1;Note=identified by match to PFAM protein family HMM PF00324;gbkey=CDS;gene=arcD;product=arginine/ornithine antiporter;protein_id=NP_689151.1;transl_table=11
NC_004116.1	RefSeq	gene	2148417	2149373	.	+	.	ID=gene2267;Dbxref=GeneID:1014978;Name=arcC-2;gbkey=Gene;gene=arcC-2;gene_biotype=protein_coding;locus_tag=SAG2167
NC_004116.1	RefSeq	CDS	2148417	2149373	.	+	0	ID=cds2118;Parent=gene2267;Dbxref=Genbank:NP_689152.1,GeneID:1014978;Name=NP_689152.1;Note=catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;gene=arcC-2;product=carbamate kinase;protein_id=NP_689152.1;transl_table=11
NC_004116.1	RefSeq	gene	2149483	2150508	.	-	.	ID=gene2268;Dbxref=GeneID:1014979;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=SAG2168
NC_004116.1	RefSeq	CDS	2149483	2150508	.	-	0	ID=cds2119;Parent=gene2268;Dbxref=Genbank:NP_689153.1,GeneID:1014979;Name=NP_689153.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=trpS;product=tryptophanyl-tRNA synthetase;protein_id=NP_689153.1;transl_table=11
NC_004116.1	RefSeq	gene	2150616	2151308	.	-	.	ID=gene2269;Dbxref=GeneID:1014980;Name=SAG2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2169
NC_004116.1	RefSeq	CDS	2150616	2151308	.	-	0	ID=cds2120;Parent=gene2269;Dbxref=Genbank:NP_689154.1,GeneID:1014980;Name=NP_689154.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689154.1;transl_table=11
NC_004116.1	RefSeq	gene	2151552	2152424	.	+	.	ID=gene2270;Dbxref=GeneID:1014981;Name=SAG2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2170
NC_004116.1	RefSeq	CDS	2151552	2152424	.	+	0	ID=cds2121;Parent=gene2270;Dbxref=Genbank:NP_689155.1,GeneID:1014981;Name=NP_689155.1;gbkey=CDS;product=hypothetical protein;protein_id=NP_689155.1;transl_table=11
NC_004116.1	RefSeq	gene	2152490	2154109	.	+	.	ID=gene2271;Dbxref=GeneID:1014982;Name=SAG2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2171
NC_004116.1	RefSeq	CDS	2152490	2154109	.	+	0	ID=cds2122;Parent=gene2271;Dbxref=Genbank:NP_689156.1,GeneID:1014982;Name=NP_689156.1;Note=identified by match to PFAM protein family HMM PF00005;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=NP_689156.1;transl_table=11
NC_004116.1	RefSeq	gene	2154232	2156811	.	+	.	ID=gene2272;Dbxref=GeneID:1014983;Name=SAG2172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2172
NC_004116.1	RefSeq	CDS	2154232	2156811	.	+	0	ID=cds2123;Parent=gene2272;Dbxref=Genbank:NP_689157.1,GeneID:1014983;Name=NP_689157.1;Note=similar to OMNI:NTL01SPL1730%3B identified by sequence similarity;gbkey=CDS;product=hypothetical protein;protein_id=NP_689157.1;transl_table=11
NC_004116.1	RefSeq	gene	2156879	2156952	.	-	.	ID=gene2273;Dbxref=GeneID:1014984;Name=tRNA-Asn-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Asn-2
NC_004116.1	RefSeq	tRNA	2156879	2156952	.	-	.	ID=rna98;Parent=gene2273;Dbxref=GeneID:1014984;gbkey=tRNA;product=tRNA-Asn
NC_004116.1	RefSeq	exon	2156879	2156952	.	-	.	ID=id101;Parent=rna98;Dbxref=GeneID:1014984;gbkey=tRNA;product=tRNA-Asn
NC_004116.1	RefSeq	gene	2156982	2157053	.	-	.	ID=gene2274;Dbxref=GeneID:1014985;Name=tRNA-Glu-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Glu-2
NC_004116.1	RefSeq	tRNA	2156982	2157053	.	-	.	ID=rna99;Parent=gene2274;Dbxref=GeneID:1014985;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	exon	2156982	2157053	.	-	.	ID=id102;Parent=rna99;Dbxref=GeneID:1014985;gbkey=tRNA;product=tRNA-Glu
NC_004116.1	RefSeq	gene	2157245	2157318	.	+	.	ID=gene2275;Dbxref=GeneID:1014986;Name=tRNA-Arg-2;gbkey=Gene;gene_biotype=tRNA;locus_tag=tRNA-Arg-2
NC_004116.1	RefSeq	tRNA	2157245	2157318	.	+	.	ID=rna100;Parent=gene2275;Dbxref=GeneID:1014986;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	exon	2157245	2157318	.	+	.	ID=id103;Parent=rna100;Dbxref=GeneID:1014986;gbkey=tRNA;product=tRNA-Arg
NC_004116.1	RefSeq	gene	2157390	2157869	.	-	.	ID=gene2276;Dbxref=GeneID:1014987;Name=SAG2173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2173
NC_004116.1	RefSeq	CDS	2157390	2157869	.	-	0	ID=cds2124;Parent=gene2276;Dbxref=Genbank:NP_689158.1,GeneID:1014987;Name=NP_689158.1;Note=SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;gbkey=CDS;product=rRNA large subunit methyltransferase;protein_id=NP_689158.1;transl_table=11
NC_004116.1	RefSeq	gene	2158070	2159299	.	+	.	ID=gene2277;Dbxref=GeneID:1014988;Name=SAG2174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2174
NC_004116.1	RefSeq	CDS	2158070	2159299	.	+	0	ID=cds2125;Parent=gene2277;Dbxref=Genbank:NP_689159.1,GeneID:1014988;Name=NP_689159.1;Note=identified by match to PFAM protein family HMM PF00089;gbkey=CDS;product=serine protease;protein_id=NP_689159.1;transl_table=11
NC_004116.1	RefSeq	gene	2159397	2160170	.	+	.	ID=gene2278;Dbxref=GeneID:1014989;Name=SAG2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAG2175
NC_004116.1	RefSeq	CDS	2159397	2160170	.	+	0	ID=cds2126;Parent=gene2278;Dbxref=Genbank:NP_689160.1,GeneID:1014989;Name=NP_689160.1;Note=identified by match to PFAM protein family HMM PF02195;gbkey=CDS;product=ParB family partitioning protein;protein_id=NP_689160.1;transl_table=11
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