locus-tag	class	description
DKY66_RS00010	COG0592	DNA-directed DNA polymerase activity
DKY66_RS00015	COG1597	lipid kinase activity
DKY66_RS00030	COG0012	GTP binding
DKY66_RS00040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DKY66_RS00050	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DKY66_RS00080	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKY66_RS00330	COG0436	Aminotransferase
DKY66_RS00345	COG0416	fatty acid biosynthetic process
DKY66_RS00350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DKY66_RS00355	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DKY66_RS00360	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DKY66_RS00375	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DKY66_RS00385	COG0138	bifunctional purine biosynthesis protein purh
DKY66_RS00410	COG1175	transmembrane transport
DKY66_RS00415	COG0395	ABC-type sugar transport system, permease component
DKY66_RS00430	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DKY66_RS00440	COG3458	cephalosporin-C deacetylase activity
DKY66_RS00455	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DKY66_RS00475	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DKY66_RS00490	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DKY66_RS00500	COG2755	lipolytic protein G-D-S-L family
DKY66_RS00500	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DKY66_RS00505	COG1454	alcohol dehydrogenase
DKY66_RS00505	COG1012	belongs to the aldehyde dehydrogenase family
DKY66_RS00510	COG1064	alcohol dehydrogenase
DKY66_RS00520	COG0534	Mate efflux family protein
DKY66_RS00630	COG0201	protein transport
DKY66_RS00635	COG0563	adenylate kinase activity
DKY66_RS00650	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DKY66_RS00660	COG0202	RNA polymerase activity
DKY66_RS00965	COG1598	PFAM Uncharacterised protein family UPF0150
DKY66_RS01000	COG0740	serine-type endopeptidase activity
DKY66_RS01120	COG1705	Flagellar rod assembly protein muramidase FlgJ
DKY66_RS01125	COG1420	regulation of RNA biosynthetic process
DKY66_RS01135	COG0443	Heat shock 70 kDa protein
DKY66_RS01145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKY66_RS01155	COG0351	phosphomethylpyrimidine kinase
DKY66_RS01160	COG4720	Psort location CytoplasmicMembrane, score
DKY66_RS01170	COG0668	transmembrane transport
DKY66_RS01200	COG0756	dUTP diphosphatase activity
DKY66_RS01215	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKY66_RS01225	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DKY66_RS01230	COG1879	ABC-type sugar transport system periplasmic component
DKY66_RS01235	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKY66_RS01250	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKY66_RS01255	COG1609	Transcriptional regulator
DKY66_RS01265	COG0577	efflux transmembrane transporter activity
DKY66_RS01270	COG1136	(ABC) transporter
DKY66_RS01275	COG0745	RESPONSE REGULATOR receiver
DKY66_RS01280	COG5002	protein histidine kinase activity
DKY66_RS01285	COG0137	argininosuccinate synthase activity
DKY66_RS01295	COG0191	fructose-bisphosphate aldolase activity
DKY66_RS01315	COG1461	Dihydroxyacetone kinase
DKY66_RS01335	COG1126	abc transporter atp-binding protein
DKY66_RS01340	COG0765	amino acid transport
DKY66_RS01360	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DKY66_RS01370	COG0719	Fe-S assembly protein
DKY66_RS01375	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DKY66_RS01385	COG0719	Fe-S assembly protein
DKY66_RS01390	COG1686	Belongs to the peptidase S11 family
DKY66_RS01395	COG1686	Belongs to the peptidase S11 family
DKY66_RS01400	COG4166	transmembrane transport
DKY66_RS01405	COG0601	transmembrane transport
DKY66_RS01410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKY66_RS01415	COG0444	Belongs to the ABC transporter superfamily
DKY66_RS01420	COG4608	Belongs to the ABC transporter superfamily
DKY66_RS01465	COG1121	(ABC) transporter
DKY66_RS01470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DKY66_RS01485	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DKY66_RS01485	COG4499	WXG100 protein secretion system (Wss), protein YukC
DKY66_RS01515	COG1459	type II secretion system
DKY66_RS01560	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DKY66_RS01565	COG1363	Peptidase, m42
DKY66_RS01580	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DKY66_RS01585	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKY66_RS01600	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKY66_RS01620	COG1346	cytolysis
DKY66_RS01635	COG0601	transmembrane transport
DKY66_RS01640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKY66_RS01645	COG1122	ATPase activity
DKY66_RS01655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKY66_RS01655	COG1263	PTS System
DKY66_RS01660	COG0366	Alpha amylase catalytic
DKY66_RS01665	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKY66_RS01680	COG3959	Transketolase, thiamine diphosphate binding domain
DKY66_RS01685	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DKY66_RS01690	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKY66_RS01700	COG1185	polyribonucleotide nucleotidyltransferase activity
DKY66_RS01710	COG1045	serine acetyltransferase
DKY66_RS01720	COG0215	cysteine-tRNA ligase activity
DKY66_RS01725	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DKY66_RS01750	COG1476	TRANSCRIPTIONal
DKY66_RS01755	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DKY66_RS01765	COG0582	viral genome integration into host DNA
DKY66_RS01770	COG1396	sequence-specific DNA binding
DKY66_RS01810	COG5290	Psort location Cytoplasmic, score
DKY66_RS01835	COG2814	Major facilitator Superfamily
DKY66_RS01845	COG1732	Glycine betaine
DKY66_RS02010	COG1695	Transcriptional regulator
DKY66_RS02025	COG1755	Isoprenylcysteine carboxyl methyltransferase
DKY66_RS02065	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DKY66_RS02070	COG0446	pyridine nucleotide-disulphide oxidoreductase
DKY66_RS02090	COG1131	(ABC) transporter
DKY66_RS02105	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DKY66_RS02110	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DKY66_RS02115	COG0275	rRNA processing
DKY66_RS02125	COG0768	penicillin binding
DKY66_RS02135	COG0513	Belongs to the DEAD box helicase family
DKY66_RS02150	COG1126	abc transporter atp-binding protein
DKY66_RS02160	COG0492	ferredoxin-NADP+ reductase activity
DKY66_RS02165	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DKY66_RS02175	COG3579	cysteine-type endopeptidase activity
DKY66_RS02180	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DKY66_RS02210	COG0116	Belongs to the methyltransferase superfamily
DKY66_RS02220	COG1854	S-ribosylhomocysteine lyase activity
DKY66_RS02225	COG4372	Transposase
DKY66_RS02225	COG1418	mRNA catabolic process
DKY66_RS02235	COG1131	(ABC) transporter
DKY66_RS02245	COG4585	Histidine kinase
DKY66_RS02250	COG2197	response regulator
DKY66_RS02260	COG0194	GDP metabolic process
DKY66_RS02270	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DKY66_RS02275	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DKY66_RS02280	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DKY66_RS02280	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DKY66_RS02290	COG0515	serine threonine protein kinase
DKY66_RS02290	COG2815	serine threonine protein kinase
DKY66_RS02300	COG4585	Histidine kinase
DKY66_RS02305	COG2197	response regulator
DKY66_RS02315	COG1098	S1 RNA binding domain
DKY66_RS02320	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DKY66_RS02325	COG1349	DNA-binding transcription factor activity
DKY66_RS02335	COG1447	Phosphotransferase system cellobiose-specific component IIA
DKY66_RS02345	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKY66_RS02350	COG1882	Formate acetyltransferase
DKY66_RS02370	COG1739	Uncharacterized protein family UPF0029
DKY66_RS02375	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DKY66_RS02415	COG0527	aspartate kinase activity
DKY66_RS02420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKY66_RS02430	COG1024	Enoyl-CoA hydratase
DKY66_RS02440	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DKY66_RS02450	COG2070	2-Nitropropane dioxygenase
DKY66_RS02455	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DKY66_RS02460	COG1028	Short-chain dehydrogenase reductase Sdr
DKY66_RS02465	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKY66_RS02480	COG0439	Biotin carboxylase
DKY66_RS02500	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DKY66_RS02515	COG3716	PTS system mannose fructose sorbose family IID component
DKY66_RS02520	COG3715	PTS system
DKY66_RS02535	COG0561	phosphatase activity
DKY66_RS02550	COG2252	PERMEase
DKY66_RS02555	COG0802	atpase or kinase
DKY66_RS02565	COG1316	TRANSCRIPTIONal
DKY66_RS02575	COG0537	adenosine 5'-monophosphoramidase activity
DKY66_RS02590	COG1131	(ABC) transporter
DKY66_RS02595	COG4473	ABC transporter
DKY66_RS02605	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DKY66_RS02620	COG0195	Participates in both transcription termination and antitermination
DKY66_RS02625	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DKY66_RS02635	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DKY66_RS02640	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DKY66_RS02665	COG2860	membrane
DKY66_RS02675	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DKY66_RS02675	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DKY66_RS02680	COG1832	CoA-binding protein
DKY66_RS02700	COG5002	protein histidine kinase activity
DKY66_RS02720	COG1268	BioY protein
DKY66_RS02725	COG1234	tRNA 3'-trailer cleavage
DKY66_RS02740	COG0166	Belongs to the GPI family
DKY66_RS02745	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DKY66_RS02750	COG0705	Rhomboid family
DKY66_RS02750	COG0457	Tetratricopeptide repeat
DKY66_RS02755	COG1744	ABC transporter substrate-binding protein PnrA-like
DKY66_RS02760	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DKY66_RS02775	COG0706	membrane insertase activity
DKY66_RS02850	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DKY66_RS02860	COG2153	protein acetylation
DKY66_RS02870	COG1216	Glycosyl transferase, family 2
DKY66_RS02870	COG1442	glycosyl transferase family 8
DKY66_RS02930	COG0789	Transcriptional regulator
DKY66_RS02940	COG0656	L-ascorbic acid biosynthetic process
DKY66_RS02990	COG0582	viral genome integration into host DNA
DKY66_RS03020	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKY66_RS03050	COG0673	inositol 2-dehydrogenase activity
DKY66_RS03060	COG2315	Protein conserved in bacteria
DKY66_RS03080	COG0742	ribosomal rna small subunit methyltransferase
DKY66_RS03095	COG3480	Lon protease (S16) C-terminal proteolytic domain
DKY66_RS03100	COG0737	Belongs to the 5'-nucleotidase family
DKY66_RS03105	COG4470	Protein conserved in bacteria
DKY66_RS03110	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DKY66_RS03120	COG1132	(ABC) transporter
DKY66_RS03125	COG1132	(ABC) transporter
DKY66_RS03130	COG0512	Glutamine amidotransferase of anthranilate synthase
DKY66_RS03140	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DKY66_RS03160	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DKY66_RS03175	COG1940	carbohydrate kinase activity
DKY66_RS03180	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DKY66_RS03185	COG1217	gtp-binding protein TYPA
DKY66_RS03195	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DKY66_RS03220	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DKY66_RS03230	COG0762	integral membrane protein
DKY66_RS03235	COG2302	S4 RNA-binding domain
DKY66_RS03240	COG3599	regulation of cell shape
DKY66_RS03245	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DKY66_RS03255	COG0494	nUDIX hydrolase
DKY66_RS03260	COG0542	response to heat
DKY66_RS03270	COG4703	Protein of unknown function (DUF1797)
DKY66_RS03275	COG0765	amino acid transport
DKY66_RS03280	COG1126	abc transporter atp-binding protein
DKY66_RS03285	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DKY66_RS03295	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DKY66_RS03300	COG1570	exodeoxyribonuclease VII activity
DKY66_RS03305	COG1722	exodeoxyribonuclease VII activity
DKY66_RS03315	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DKY66_RS03320	COG1438	arginine binding
DKY66_RS03325	COG0497	DNA recombination
DKY66_RS03330	COG1307	EDD domain protein, DegV family
DKY66_RS03335	COG2755	lipolytic protein G-D-S-L family
DKY66_RS03380	COG1078	dGTPase activity
DKY66_RS03405	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DKY66_RS03415	COG2884	Cell division ATP-binding protein ftsE
DKY66_RS03420	COG2177	Part of the ABC transporter FtsEX involved in
DKY66_RS03450	COG1199	ATP-dependent helicase activity
DKY66_RS03450	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DKY66_RS03455	COG0436	Aminotransferase
DKY66_RS03460	COG0017	Asparaginyl-tRNA synthetase
DKY66_RS03485	COG1660	Displays ATPase and GTPase activities
DKY66_RS03510	COG0254	rRNA binding
DKY66_RS03515	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DKY66_RS03520	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DKY66_RS03525	COG0716	FMN binding
DKY66_RS03530	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DKY66_RS03530	COG1605	Chorismate mutase
DKY66_RS03535	COG0038	chloride channel
DKY66_RS03540	COG0335	large ribosomal subunit rRNA binding
DKY66_RS03590	COG1136	(ABC) transporter
DKY66_RS03605	COG5002	protein histidine kinase activity
DKY66_RS03625	COG0772	Belongs to the SEDS family
DKY66_RS03645	COG0560	Phosphoserine phosphatase
DKY66_RS03660	COG0148	phosphopyruvate hydratase activity
DKY66_RS03680	COG1316	TRANSCRIPTIONal
DKY66_RS03720	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DKY66_RS03755	COG1028	Short-chain dehydrogenase reductase Sdr
DKY66_RS03760	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DKY66_RS03765	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DKY66_RS03785	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DKY66_RS03790	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKY66_RS03810	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DKY66_RS03810	COG3064	Membrane
DKY66_RS03825	COG3590	peptidase
DKY66_RS03830	COG3590	peptidase
DKY66_RS03870	COG1136	(ABC) transporter
DKY66_RS03885	COG0586	Pfam SNARE associated Golgi protein
DKY66_RS03890	COG4619	ABC transporter
DKY66_RS03895	COG0390	transport system, permease component
DKY66_RS03905	COG0583	DNA-binding transcription factor activity
DKY66_RS03930	COG3250	beta-galactosidase activity
DKY66_RS03935	COG2186	Transcriptional regulator
DKY66_RS03945	COG0800	Aldolase
DKY66_RS03960	COG1028	Short-chain dehydrogenase reductase Sdr
DKY66_RS03980	COG1609	Transcriptional regulator
DKY66_RS03995	COG0438	transferase activity, transferring glycosyl groups
DKY66_RS04020	COG0765	amino acid transport
DKY66_RS04025	COG0765	amino acid transport
DKY66_RS04030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKY66_RS04035	COG1126	abc transporter atp-binding protein
DKY66_RS04040	COG0745	RESPONSE REGULATOR receiver
DKY66_RS04045	COG5002	protein histidine kinase activity
DKY66_RS04050	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DKY66_RS04055	COG2832	Protein of unknown function (DUF454)
DKY66_RS04065	COG1196	nuclear chromosome segregation
DKY66_RS04070	COG0561	phosphatase activity
DKY66_RS04075	COG0561	phosphatase activity
DKY66_RS04080	COG0552	protein localization to endoplasmic reticulum
DKY66_RS04090	COG3689	TIGRFAM TIGR03943 family protein
DKY66_RS04095	COG0701	Predicted permease
DKY66_RS04110	COG2183	response to ionizing radiation
DKY66_RS04115	COG3091	SprT-like family
DKY66_RS04120	COG1983	PspC domain protein
DKY66_RS04160	COG0826	peptidase U32
DKY66_RS04165	COG4443	Transcriptional Coactivator p15 (PC4)
DKY66_RS04175	COG1914	H( )-stimulated, divalent metal cation uptake system
DKY66_RS04215	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DKY66_RS04240	COG1164	Oligoendopeptidase f
DKY66_RS04250	COG0772	Belongs to the SEDS family
DKY66_RS04270	COG0768	penicillin binding
DKY66_RS04285	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DKY66_RS04290	COG2223	nitrite transmembrane transporter activity
DKY66_RS04315	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DKY66_RS04320	COG2011	ABC-type metal ion transport system permease component
DKY66_RS04325	COG1464	Belongs to the NlpA lipoprotein family
DKY66_RS04330	COG0513	Belongs to the DEAD box helicase family
DKY66_RS04340	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DKY66_RS04345	COG0204	Acyl-transferase
DKY66_RS04350	COG1596	polysaccharide export
DKY66_RS04350	COG1555	photosystem II stabilization
DKY66_RS04355	COG0658	competence protein
DKY66_RS04355	COG2333	competence protein COMEC
DKY66_RS04360	COG0561	phosphatase activity
DKY66_RS04365	COG1609	Transcriptional regulator
DKY66_RS04370	COG0657	acetylesterase activity
DKY66_RS04375	COG2226	methyltransferase
DKY66_RS04385	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DKY66_RS04390	COG3711	transcriptional antiterminator
DKY66_RS04395	COG1263	PTS System
DKY66_RS04395	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKY66_RS04395	COG2190	(PTS) system
DKY66_RS04405	COG3835	regulator
DKY66_RS04410	COG1929	Belongs to the glycerate kinase type-1 family
DKY66_RS04415	COG2610	gluconate transmembrane transporter activity
DKY66_RS04425	COG1846	Transcriptional regulator
DKY66_RS04430	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DKY66_RS04440	COG0363	glucosamine-6-phosphate deaminase activity
DKY66_RS04445	COG0435	Glutathione S-transferase
DKY66_RS04450	COG1187	pseudouridine synthase activity
DKY66_RS04475	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DKY66_RS04480	COG4122	O-methyltransferase activity
DKY66_RS04485	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DKY66_RS04490	COG4894	glucomannan catabolic process
DKY66_RS04495	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DKY66_RS04505	COG1442	glycosyl transferase family 8
DKY66_RS04520	COG1476	TRANSCRIPTIONal
DKY66_RS04535	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DKY66_RS04540	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DKY66_RS04545	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DKY66_RS04560	COG1012	belongs to the aldehyde dehydrogenase family
DKY66_RS04565	COG0726	polysaccharide deacetylase
DKY66_RS04570	COG0513	Belongs to the DEAD box helicase family
DKY66_RS04580	COG1956	GAF domain-containing protein
DKY66_RS04585	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DKY66_RS04595	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DKY66_RS04595	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DKY66_RS04625	COG4721	ABC-type cobalt transport system, permease component
DKY66_RS04630	COG1122	ATPase activity
DKY66_RS04640	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DKY66_RS04660	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DKY66_RS04670	COG4109	DRTGG domain
DKY66_RS04675	COG0024	Methionine aminopeptidase
DKY66_RS04685	COG2246	polysaccharide biosynthetic process
DKY66_RS04690	COG4708	membrane
DKY66_RS04695	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DKY66_RS04700	COG1597	lipid kinase activity
DKY66_RS04705	COG1523	belongs to the glycosyl hydrolase 13 family
DKY66_RS04765	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DKY66_RS04775	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DKY66_RS04800	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKY66_RS04800	COG0072	phenylalanine-tRNA ligase activity
DKY66_RS04805	COG2321	neutral zinc metallopeptidase
DKY66_RS04810	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DKY66_RS04815	COG1074	ATP-dependent DNA helicase activity
DKY66_RS04825	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DKY66_RS04830	COG0488	(ABC) transporter
DKY66_RS04835	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DKY66_RS04840	COG0022	dehydrogenase e1 component
DKY66_RS04840	COG0508	dehydrogenase complex catalyzes the overall conversion of
DKY66_RS04845	COG0508	dehydrogenase complex catalyzes the overall conversion of
DKY66_RS04855	COG0095	Lipoate-protein ligase
DKY66_RS04865	COG3344	reverse transcriptase
DKY66_RS04870	COG3442	glutamine amidotransferase
DKY66_RS04875	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DKY66_RS04880	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DKY66_RS04905	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DKY66_RS04915	COG0647	UMP catabolic process
DKY66_RS04925	COG3513	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DKY66_RS04930	COG1518	maintenance of DNA repeat elements
DKY66_RS04935	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DKY66_RS04955	COG0481	GTPase activity
DKY66_RS04965	COG1418	mRNA catabolic process
DKY66_RS04970	COG0456	acetyltransferase
DKY66_RS04980	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DKY66_RS05010	COG1131	(ABC) transporter
DKY66_RS05015	COG1725	Transcriptional regulator
DKY66_RS05025	COG0205	6-phosphofructokinase activity
DKY66_RS05030	COG0469	pyruvate kinase activity
DKY66_RS05045	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DKY66_RS05050	COG2824	Alkylphosphonate utilization operon protein PhnA
DKY66_RS05055	COG0765	amino acid transport
DKY66_RS05060	COG1126	abc transporter atp-binding protein
DKY66_RS05075	COG1072	(Pantothenic acid kinase))
DKY66_RS05080	COG2813	Specifically methylates the guanine in position
DKY66_RS05090	COG1744	ABC transporter substrate-binding protein PnrA-like
DKY66_RS05095	COG3845	ABC transporter
DKY66_RS05100	COG4603	Belongs to the binding-protein-dependent transport system permease family
DKY66_RS05105	COG1079	Belongs to the binding-protein-dependent transport system permease family
DKY66_RS05125	COG3764	Sortase (surface protein transpeptidase)
DKY66_RS05130	COG0346	lactoylglutathione lyase activity
DKY66_RS05160	COG1674	ftsk spoiiie
DKY66_RS05165	COG2946	Replication initiation factor
DKY66_RS05210	COG0741	lytic transglycosylase activity
DKY66_RS05210	COG0791	NLP P60 protein
DKY66_RS05265	COG0582	viral genome integration into host DNA
DKY66_RS05275	COG2188	Transcriptional regulator
DKY66_RS05290	COG1464	Belongs to the NlpA lipoprotein family
DKY66_RS05305	COG1136	(ABC) transporter
DKY66_RS05315	COG0745	RESPONSE REGULATOR receiver
DKY66_RS05320	COG5002	protein histidine kinase activity
DKY66_RS05325	COG4974	Belongs to the 'phage' integrase family
DKY66_RS05330	COG4166	transmembrane transport
DKY66_RS05345	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DKY66_RS05350	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DKY66_RS05355	COG5002	protein histidine kinase activity
DKY66_RS05360	COG0745	RESPONSE REGULATOR receiver
DKY66_RS05370	COG0704	Plays a role in the regulation of phosphate uptake
DKY66_RS05375	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DKY66_RS05380	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DKY66_RS05385	COG0581	inorganic phosphate transmembrane transporter activity
DKY66_RS05390	COG0573	inorganic phosphate transmembrane transporter activity
DKY66_RS05400	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
DKY66_RS05400	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DKY66_RS05405	COG0483	inositol monophosphate 1-phosphatase activity
DKY66_RS05410	COG4476	Belongs to the UPF0223 family
DKY66_RS05420	COG0196	riboflavin kinase activity
DKY66_RS05425	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DKY66_RS05455	COG1136	(ABC) transporter
DKY66_RS05460	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DKY66_RS05465	COG0758	DNA mediated transformation
DKY66_RS05470	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DKY66_RS05475	COG4604	ABC transporter, ATP-binding protein
DKY66_RS05480	COG4605	iron ion homeostasis
DKY66_RS05485	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKY66_RS05490	COG0110	maltose O-acetyltransferase activity
DKY66_RS05500	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DKY66_RS05505	COG1376	ErfK ybiS ycfS ynhG family protein
DKY66_RS05510	COG1966	Carbon starvation protein
DKY66_RS05515	COG3279	Response regulator of the LytR AlgR family
DKY66_RS05520	COG3275	phosphorelay sensor kinase activity
DKY66_RS05615	COG0505	Belongs to the CarA family
DKY66_RS05630	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DKY66_RS05645	COG0488	(ABC) transporter
DKY66_RS05655	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DKY66_RS05670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DKY66_RS05710	COG0095	Lipoate-protein ligase
DKY66_RS05720	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DKY66_RS05725	COG4684	Psort location CytoplasmicMembrane, score
DKY66_RS05730	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DKY66_RS05740	COG1132	(ABC) transporter
DKY66_RS05770	COG2890	protein-(glutamine-N5) methyltransferase activity
DKY66_RS05775	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DKY66_RS05785	COG1942	4-Oxalocrotonate Tautomerase
DKY66_RS05805	COG3976	FMN-binding domain protein
DKY66_RS05805	COG1053	succinate dehydrogenase
DKY66_RS05805	COG0431	NADPH-dependent FMN reductase
DKY66_RS05815	COG2233	PERMEase
DKY66_RS05830	COG0477	Major facilitator Superfamily
DKY66_RS05850	COG0280	phosphate acetyltransferase
DKY66_RS05855	COG0564	pseudouridine synthase activity
DKY66_RS05865	COG2357	RelA SpoT domain protein
DKY66_RS05880	COG1104	cysteine desulfurase activity
DKY66_RS05890	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DKY66_RS05895	COG2003	Belongs to the UPF0758 family
DKY66_RS05900	COG0628	permease
DKY66_RS05905	COG2723	6-phospho-beta-galactosidase activity
DKY66_RS05915	COG0561	phosphatase activity
DKY66_RS05935	COG0860	N-Acetylmuramoyl-L-alanine amidase
DKY66_RS05935	COG1388	LysM domain
DKY66_RS06000	COG0740	serine-type endopeptidase activity
DKY66_RS06005	COG4695	Portal protein
DKY66_RS06045	COG0270	DNA (cytosine-5-)-methyltransferase activity
DKY66_RS06115	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DKY66_RS06115	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DKY66_RS06240	COG0038	chloride channel
DKY66_RS06250	COG1177	transmembrane transport
DKY66_RS06255	COG1176	ABC-type spermidine putrescine transport system, permease component I
DKY66_RS06265	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DKY66_RS06290	COG0285	dihydrofolate synthase activity
DKY66_RS06295	COG2962	Rard protein
DKY66_RS06325	COG1012	belongs to the aldehyde dehydrogenase family
DKY66_RS06400	COG2261	transglycosylase associated protein
DKY66_RS06425	COG1115	amino acid carrier protein
DKY66_RS06430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DKY66_RS06435	COG1380	Effector of murein hydrolase LrgA
DKY66_RS06440	COG1346	cytolysis
DKY66_RS06455	COG0539	negative regulation of cytoplasmic translation
DKY66_RS06475	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DKY66_RS06485	COG0187	DNA topoisomerase II activity
DKY66_RS06490	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DKY66_RS06495	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DKY66_RS06505	COG2755	lipolytic protein G-D-S-L family
DKY66_RS06505	COG1083	cytidylyl-transferase
DKY66_RS06520	COG2089	acid synthase
DKY66_RS06535	COG1216	Glycosyl transferase, family 2
DKY66_RS06535	COG1442	glycosyl transferase family 8
DKY66_RS06540	COG1216	Glycosyl transferase, family 2
DKY66_RS06540	COG1442	glycosyl transferase family 8
DKY66_RS06555	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DKY66_RS06560	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DKY66_RS06580	COG1316	TRANSCRIPTIONal
DKY66_RS06615	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DKY66_RS06650	COG3842	ATPase activity
DKY66_RS06665	COG1293	RNA-binding protein homologous to eukaryotic snRNP
DKY66_RS06670	COG3527	Alpha-acetolactate decarboxylase
DKY66_RS06675	COG0028	Belongs to the TPP enzyme family
DKY66_RS06680	COG0457	Tetratricopeptide repeat
DKY66_RS06685	COG0628	permease
DKY66_RS06695	COG1051	belongs to the nudix hydrolase family
DKY66_RS06700	COG5492	domain, Protein
DKY66_RS06705	COG1088	dTDP-glucose 4,6-dehydratase activity
DKY66_RS06715	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DKY66_RS06720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DKY66_RS06730	COG2384	SAM-dependent methyltransferase
DKY66_RS06755	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DKY66_RS06755	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DKY66_RS06760	COG0300	oxidoreductase activity
DKY66_RS06775	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DKY66_RS06780	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DKY66_RS06805	COG1573	uracil-dna glycosylase
DKY66_RS06810	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DKY66_RS06820	COG0584	glycerophosphoryl diester phosphodiesterase
DKY66_RS06845	COG0534	Mate efflux family protein
DKY66_RS06885	COG0803	Belongs to the bacterial solute-binding protein 9 family
DKY66_RS06970	COG0515	serine threonine protein kinase
DKY66_RS07005	COG2040	homocysteine
DKY66_RS07010	COG0833	amino acid
DKY66_RS07050	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DKY66_RS07060	COG3425	synthase
DKY66_RS07075	COG1272	protein, Hemolysin III
DKY66_RS07120	COG0745	RESPONSE REGULATOR receiver
DKY66_RS07125	COG2357	RelA SpoT domain protein
DKY66_RS07130	COG1132	(ABC) transporter
DKY66_RS07145	COG0737	Belongs to the 5'-nucleotidase family
DKY66_RS07150	COG0242	peptide deformylase activity
DKY66_RS07155	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DKY66_RS07165	COG1132	(ABC) transporter
DKY66_RS07180	COG0488	(ABC) transporter
DKY66_RS07210	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKY66_RS07210	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKY66_RS07210	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKY66_RS07215	COG1105	Belongs to the carbohydrate kinase PfkB family
DKY66_RS07220	COG1349	DNA-binding transcription factor activity
DKY66_RS07275	COG1837	Belongs to the UPF0109 family
DKY66_RS07280	COG0228	four-way junction DNA binding
DKY66_RS07285	COG0577	efflux transmembrane transporter activity
DKY66_RS07290	COG1136	(ABC) transporter
DKY66_RS07295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKY66_RS07300	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DKY66_RS07305	COG0505	Belongs to the CarA family
DKY66_RS07315	COG0564	pseudouridine synthase activity
DKY66_RS07325	COG0583	DNA-binding transcription factor activity
DKY66_RS07330	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DKY66_RS07355	COG1104	cysteine desulfurase activity
DKY66_RS07365	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKY66_RS07370	COG1442	glycosyl transferase family 8
DKY66_RS07390	COG0653	protein targeting
DKY66_RS07440	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DKY66_RS07445	COG1368	sulfuric ester hydrolase activity
DKY66_RS07450	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DKY66_RS07460	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DKY66_RS07490	COG2244	polysaccharide biosynthetic process
DKY66_RS07495	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DKY66_RS07500	COG1120	ATPase activity
DKY66_RS07505	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DKY66_RS07510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKY66_RS07515	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKY66_RS07530	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DKY66_RS07535	COG1253	flavin adenine dinucleotide binding
DKY66_RS07545	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DKY66_RS07550	COG1242	4 iron, 4 sulfur cluster binding
DKY66_RS07555	COG0671	phosphoesterase, PA-phosphatase related
DKY66_RS07560	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DKY66_RS07590	COG0681	Belongs to the peptidase S26 family
DKY66_RS07600	COG0297	glycogen (starch) synthase activity
DKY66_RS07640	COG3475	LICD family
DKY66_RS07655	COG0463	Glycosyl transferase, family 2
DKY66_RS07660	COG1215	transferase activity, transferring glycosyl groups
DKY66_RS07670	COG1091	dTDP-4-dehydrorhamnose reductase activity
DKY66_RS07675	COG2151	metal-sulfur cluster biosynthetic enzyme
DKY66_RS07680	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DKY66_RS07685	COG0358	DNA primase activity
DKY66_RS07690	COG1970	mechanosensitive ion channel activity
DKY66_RS07715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKY66_RS07720	COG0004	ammonium transporteR
DKY66_RS07730	COG1054	Belongs to the UPF0176 family
DKY66_RS07740	COG2271	Major facilitator Superfamily
DKY66_RS07750	COG0058	SHG alpha-glucan phosphorylase activity
DKY66_RS07755	COG1640	4-alpha-glucanotransferase
DKY66_RS07760	COG1609	Transcriptional regulator
DKY66_RS07770	COG1175	transmembrane transport
DKY66_RS07775	COG3833	ABC-type maltose transport systems, permease component
DKY66_RS07780	COG3104	oligopeptide transport
DKY66_RS07820	COG0765	amino acid transport
DKY66_RS07825	COG1126	abc transporter atp-binding protein
DKY66_RS07850	COG2309	aminopeptidase activity
DKY66_RS07870	COG1187	pseudouridine synthase activity
DKY66_RS07875	COG0656	L-ascorbic acid biosynthetic process
DKY66_RS07880	COG0778	Nitroreductase
DKY66_RS07885	COG0346	lactoylglutathione lyase activity
DKY66_RS07890	COG0463	Glycosyl transferase, family 2
DKY66_RS07895	COG1113	amino acid transport
DKY66_RS07900	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DKY66_RS07905	COG0557	exoribonuclease II activity
DKY66_RS07920	COG2814	Major facilitator Superfamily
DKY66_RS07930	COG1131	(ABC) transporter
DKY66_RS07940	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DKY66_RS07945	COG1396	sequence-specific DNA binding
DKY66_RS08005	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DKY66_RS08010	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DKY66_RS08040	COG1702	phosphate starvation-inducible protein PhoH
DKY66_RS08065	COG0233	cytoplasmic translational termination
DKY66_RS08080	COG0444	Belongs to the ABC transporter superfamily
DKY66_RS08085	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKY66_RS08090	COG0601	transmembrane transport
DKY66_RS08095	COG0747	negative chemotaxis
DKY66_RS08100	COG0081	regulation of translation
DKY66_RS08120	COG1473	amidohydrolase
DKY66_RS08125	COG0583	DNA-binding transcription factor activity
DKY66_RS08145	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DKY66_RS08150	COG1674	ftsk spoiiie
DKY66_RS08155	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DKY66_RS08180	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DKY66_RS08215	COG0673	inositol 2-dehydrogenase activity
DKY66_RS08230	COG1028	Short-chain dehydrogenase reductase Sdr
DKY66_RS08275	COG1114	Component of the transport system for branched-chain amino acids
DKY66_RS08280	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKY66_RS08280	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKY66_RS08310	COG0708	Exodeoxyribonuclease III
DKY66_RS08315	COG1393	Belongs to the ArsC family
DKY66_RS08320	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DKY66_RS08335	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DKY66_RS08365	COG0470	DNA polymerase III
DKY66_RS08380	COG0517	IMP dehydrogenase activity
DKY66_RS08400	COG0559	Belongs to the binding-protein-dependent transport system permease family
DKY66_RS08420	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DKY66_RS08425	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DKY66_RS08435	COG0531	amino acid
DKY66_RS08440	COG0569	domain protein
DKY66_RS08445	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DKY66_RS08455	COG1187	pseudouridine synthase activity
DKY66_RS08505	COG1827	regulation of RNA biosynthetic process
DKY66_RS08520	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKY66_RS08525	COG1254	Belongs to the acylphosphatase family
DKY66_RS08535	COG0765	amino acid transport
DKY66_RS08540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKY66_RS08555	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DKY66_RS08590	COG1484	DNA-dependent DNA replication
DKY66_RS08605	COG5002	protein histidine kinase activity
DKY66_RS08610	COG0745	RESPONSE REGULATOR receiver
DKY66_RS08625	COG1704	LemA family
DKY66_RS08630	COG0357	Ribosomal RNA small subunit methyltransferase G
DKY66_RS08635	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DKY66_RS08640	COG0569	domain protein
DKY66_RS08665	COG1114	Component of the transport system for branched-chain amino acids
DKY66_RS08670	COG1063	alcohol dehydrogenase
DKY66_RS08695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKY66_RS08700	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DKY66_RS08710	COG0217	transcriptional regulatory protein
DKY66_RS08750	COG2376	Dihydroxyacetone kinase
DKY66_RS08755	COG1309	transcriptional regulator
DKY66_RS08765	COG2376	Dihydroxyacetone kinase
DKY66_RS08770	COG1461	Dihydroxyacetone kinase
DKY66_RS08775	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DKY66_RS08780	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DKY66_RS08805	COG2226	methyltransferase
DKY66_RS08810	COG0799	negative regulation of ribosome biogenesis
DKY66_RS08820	COG1713	HD superfamily hydrolase involved in NAD metabolism
DKY66_RS08825	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DKY66_RS08830	COG1534	Rna-binding protein
DKY66_RS08835	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DKY66_RS08840	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DKY66_RS08865	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DKY66_RS08865	COG0574	Belongs to the PEP-utilizing enzyme family
DKY66_RS08875	COG0517	IMP dehydrogenase activity
DKY66_RS08885	COG1335	isochorismatase
DKY66_RS08890	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DKY66_RS08895	COG0436	Aminotransferase
DKY66_RS08900	COG0589	response to stress
DKY66_RS08905	COG0561	phosphatase activity
DKY66_RS08910	COG0252	asparaginase activity
DKY66_RS08920	COG4989	oxidoreductase activity
DKY66_RS08925	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DKY66_RS08930	COG3942	CHAP domain
DKY66_RS08930	COG1705	Flagellar rod assembly protein muramidase FlgJ
DKY66_RS08940	COG0736	holo-[acyl-carrier-protein] synthase activity
DKY66_RS08945	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DKY66_RS08955	COG1482	cell wall glycoprotein biosynthetic process
DKY66_RS08960	COG1940	carbohydrate kinase activity
DKY66_RS08965	COG1263	PTS System
DKY66_RS08965	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKY66_RS08965	COG2190	(PTS) system
DKY66_RS08970	COG1621	beta-fructofuranosidase activity
DKY66_RS08975	COG1609	Transcriptional regulator
DKY66_RS08980	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DKY66_RS08990	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DKY66_RS09040	COG2131	deaminase
DKY66_RS09045	COG0006	proline dipeptidase activity
DKY66_RS09055	COG2814	Major facilitator Superfamily
DKY66_RS09085	COG0629	single-stranded DNA binding
DKY66_RS09090	COG0360	Binds together with S18 to 16S ribosomal RNA
DKY66_RS09095	COG1194	a g-specific adenine glycosylase
DKY66_RS09105	COG3118	belongs to the thioredoxin family
DKY66_RS09135	COG0681	Belongs to the peptidase S26 family
DKY66_RS09140	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DKY66_RS09155	COG1882	Formate acetyltransferase
DKY66_RS09165	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DKY66_RS09180	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DKY66_RS09190	COG2814	Major facilitator Superfamily
DKY66_RS09195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DKY66_RS09210	COG0142	geranyltranstransferase activity
DKY66_RS09215	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DKY66_RS09220	COG4988	ABC transporter
DKY66_RS09225	COG1294	oxidase, subunit
DKY66_RS09230	COG1271	oxidase subunit
DKY66_RS09235	COG1252	NADH dehydrogenase
DKY66_RS09260	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DKY66_RS09265	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DKY66_RS09285	COG2081	HI0933 family
DKY66_RS09315	COG0456	acetyltransferase
DKY66_RS09320	COG1214	PFAM Peptidase M22, glycoprotease
DKY66_RS09335	COG3942	CHAP domain
DKY66_RS09340	COG0174	glutamine synthetase
DKY66_RS09345	COG0789	Transcriptional regulator
DKY66_RS09360	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DKY66_RS09390	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DKY66_RS09440	COG0084	hydrolase, TatD family'
DKY66_RS09465	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DKY66_RS09470	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DKY66_RS09475	COG1696	Membrane protein involved in D-alanine export
DKY66_RS09495	COG0745	RESPONSE REGULATOR receiver
DKY66_RS09505	COG3314	Sporulation integral membrane protein YlbJ
DKY66_RS09520	COG4175	Glycine betaine
DKY66_RS09520	COG3448	diguanylate cyclase activity
DKY66_RS09530	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
DKY66_RS09550	COG1070	Carbohydrate kinase
DKY66_RS09560	COG3775	system Galactitol-specific IIC component
DKY66_RS09565	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DKY66_RS09575	COG1609	Transcriptional regulator
DKY66_RS09625	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DKY66_RS09660	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DKY66_RS09665	COG1428	Deoxynucleoside kinase
DKY66_RS09675	COG0542	response to heat
DKY66_RS09680	COG4463	regulation of RNA biosynthetic process
DKY66_RS09690	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DKY66_RS09700	COG0450	alkyl hydroperoxide reductase
DKY66_RS09715	COG0025	NhaP-type Na H and K H
DKY66_RS09725	COG1619	proteins homologs of microcin C7 resistance protein MccF
DKY66_RS09730	COG3590	peptidase
DKY66_RS09760	COG1609	Transcriptional regulator
DKY66_RS09770	COG3716	PTS system mannose fructose sorbose family IID component
DKY66_RS09775	COG3715	PTS system
DKY66_RS09780	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKY66_RS09785	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DKY66_RS09800	COG1028	Short-chain dehydrogenase reductase Sdr
DKY66_RS09835	COG2176	DNA-directed DNA polymerase activity
DKY66_RS09840	COG1705	Flagellar rod assembly protein muramidase FlgJ
DKY66_RS09840	COG1388	LysM domain
DKY66_RS09855	COG4589	Belongs to the CDS family
DKY66_RS09860	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DKY66_RS09865	COG1862	Preprotein translocase
DKY66_RS09885	COG3493	citrate carrier protein
DKY66_RS09890	COG3290	protein histidine kinase activity
DKY66_RS09895	COG4565	transcriptional regulatory protein
DKY66_RS09900	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DKY66_RS09910	COG3842	ATPase activity
DKY66_RS09990	COG1490	D-aminoacyl-tRNA deacylase activity
DKY66_RS10000	COG0737	Belongs to the 5'-nucleotidase family
DKY66_RS10010	COG1363	Peptidase, m42
DKY66_RS10025	COG4753	response regulator
DKY66_RS10025	COG2207	Transcriptional regulator
DKY66_RS10030	COG2972	Histidine kinase
DKY66_RS10035	COG3716	PTS system mannose fructose sorbose family IID component
DKY66_RS10040	COG3715	PTS system
DKY66_RS10070	COG1131	(ABC) transporter
DKY66_RS10085	COG3290	protein histidine kinase activity
DKY66_RS10090	COG3279	Response regulator of the LytR AlgR family
DKY66_RS10105	COG2190	(PTS) system
DKY66_RS10105	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKY66_RS10105	COG1263	PTS System
DKY66_RS10110	COG5002	protein histidine kinase activity
DKY66_RS10115	COG0745	RESPONSE REGULATOR receiver
DKY66_RS10125	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DKY66_RS10130	COG0581	inorganic phosphate transmembrane transporter activity
DKY66_RS10135	COG0573	inorganic phosphate transmembrane transporter activity
DKY66_RS10150	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DKY66_RS10165	COG0789	Transcriptional regulator
DKY66_RS10190	COG0456	acetyltransferase
DKY66_RS10195	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DKY66_RS10210	COG0582	viral genome integration into host DNA
DKY66_RS10250	COG0433	COG0433 Predicted ATPase
DKY66_RS10270	COG4115	mRNA cleavage
DKY66_RS10305	COG3620	sequence-specific DNA binding
DKY66_RS10320	COG1674	ftsk spoiiie
DKY66_RS10365	COG1396	sequence-specific DNA binding
DKY66_RS10415	COG1914	H( )-stimulated, divalent metal cation uptake system
DKY66_RS10425	COG1131	(ABC) transporter
DKY66_RS10435	COG1994	Peptidase M50
DKY66_RS10440	COG0535	radical SAM domain protein
DKY66_RS10510	COG1131	(ABC) transporter
DKY66_RS10520	COG1396	sequence-specific DNA binding
DKY66_RS10540	COG1694	Mazg nucleotide pyrophosphohydrolase
DKY66_RS10555	COG2897	thiosulfate sulfurtransferase activity
DKY66_RS10575	COG0371	Dehydrogenase
DKY66_RS10585	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DKY66_RS10585	COG0646	methionine synthase
DKY66_RS10590	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DKY66_RS10600	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DKY66_RS10620	COG2770	Histidine kinase
DKY66_RS10620	COG2205	protein histidine kinase activity
DKY66_RS10640	COG2814	Major facilitator Superfamily
DKY66_RS10645	COG4667	esterase of the alpha-beta hydrolase superfamily
DKY66_RS10650	COG1442	glycosyl transferase family 8
DKY66_RS10655	COG1442	glycosyl transferase family 8
DKY66_RS10680	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DKY66_RS10685	COG0564	pseudouridine synthase activity
DKY66_RS10705	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DKY66_RS10710	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
DKY66_RS10730	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DKY66_RS10735	COG1116	anion transmembrane transporter activity
DKY66_RS10735	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DKY66_RS10745	COG0561	phosphatase activity
DKY66_RS10750	COG2514	catechol 2,3-dioxygenase activity
DKY66_RS10760	COG0602	queuosine metabolic process
DKY66_RS10780	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DKY66_RS10780	COG1328	CTP reductase activity
DKY66_RS10800	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DKY66_RS10810	COG1393	Belongs to the ArsC family
DKY66_RS10815	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DKY66_RS10820	COG1058	Belongs to the CinA family
DKY66_RS10820	COG1546	Belongs to the CinA family
DKY66_RS10825	COG2818	Glycosylase
DKY66_RS10865	COG0018	arginyl-trna synthetase
DKY66_RS10875	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DKY66_RS10880	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DKY66_RS10885	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DKY66_RS10890	COG0124	histidyl-tRNA synthetase
DKY66_RS10900	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DKY66_RS10955	COG4974	Belongs to the 'phage' integrase family
DKY66_RS10965	COG0745	RESPONSE REGULATOR receiver
DKY66_RS10970	COG5002	protein histidine kinase activity
DKY66_RS10975	COG1288	antiporter activity
DKY66_RS10985	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DKY66_RS10990	COG3852	Histidine kinase
DKY66_RS10995	COG0784	Response regulator, receiver
DKY66_RS11000	COG1125	glycine betaine transport
DKY66_RS11000	COG0517	IMP dehydrogenase activity
DKY66_RS11005	COG1174	glycine betaine transport
DKY66_RS11010	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DKY66_RS11010	COG0392	lysyltransferase activity
DKY66_RS11020	COG3759	membrane
DKY66_RS11050	COG0305	Participates in initiation and elongation during chromosome replication
DKY66_RS11065	COG0445	tRNA wobble uridine modification
DKY66_RS11070	COG2095	MarC family integral membrane protein
DKY66_RS11075	COG0482	sulfurtransferase activity
DKY66_RS11080	COG1760	l-serine dehydratase
DKY66_RS11085	COG1760	l-serine dehydratase
DKY66_RS11090	COG0741	lytic transglycosylase activity
DKY66_RS11115	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DKY66_RS11120	COG0612	Peptidase, M16
DKY66_RS11125	COG0612	Peptidase, M16
DKY66_RS11130	COG2501	S4 domain
DKY66_RS11150	COG0516	GMP reductase activity
DKY66_RS11150	COG0517	IMP dehydrogenase activity
DKY66_RS11160	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DKY66_RS11205	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DKY66_RS11210	COG0488	(ABC) transporter
DKY66_RS11215	COG4485	Bacterial membrane protein, YfhO
DKY66_RS11235	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DKY66_RS11240	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKY66_RS11245	COG1475	DNA binding